Query 046196
Match_columns 1436
No_of_seqs 879 out of 5901
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 09:40:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046196.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046196hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 9E-251 2E-255 2311.8 95.3 1339 39-1436 13-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-233 5E-238 2318.3 143.5 1418 17-1436 17-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 3E-182 6E-187 1834.5 133.0 1284 96-1431 3-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 3.7E-93 8.1E-98 901.9 62.1 581 835-1433 36-659 (659)
5 TIGR00955 3a01204 The Eye Pigm 100.0 3.4E-93 7.5E-98 904.5 60.8 564 863-1436 37-617 (617)
6 KOG0061 Transporter, ABC super 100.0 3.6E-93 7.8E-98 892.4 56.7 578 836-1435 23-611 (613)
7 TIGR00956 3a01205 Pleiotropic 100.0 2.7E-90 5.9E-95 937.3 62.2 561 862-1433 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 4.3E-89 9.3E-94 920.2 59.1 563 863-1433 177-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 1.3E-82 2.9E-87 798.0 40.4 560 862-1434 126-732 (1391)
10 TIGR00955 3a01204 The Eye Pigm 100.0 6.7E-77 1.4E-81 755.5 58.7 568 165-776 36-612 (617)
11 PLN03211 ABC transporter G-25; 100.0 3.9E-76 8.5E-81 746.7 63.3 608 116-776 35-657 (659)
12 KOG0061 Transporter, ABC super 100.0 1.3E-76 2.8E-81 743.1 58.0 583 116-776 21-607 (613)
13 KOG0055 Multidrug/pheromone ex 100.0 1.7E-73 3.6E-78 719.0 61.3 818 82-1076 316-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 5.6E-73 1.2E-77 732.2 52.2 755 168-1076 535-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 4.8E-70 1E-74 733.3 71.3 224 838-1088 1937-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 5.7E-67 1.2E-71 716.3 63.3 211 837-1076 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 3.4E-66 7.3E-71 709.7 56.7 211 837-1076 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 8.2E-66 1.8E-70 612.0 48.9 474 167-1076 22-514 (539)
19 TIGR00957 MRP_assoc_pro multi 100.0 7.5E-65 1.6E-69 697.4 59.2 211 837-1076 1283-1503(1522)
20 PTZ00265 multidrug resistance 100.0 8.3E-65 1.8E-69 688.8 58.3 217 837-1076 1164-1447(1466)
21 PRK13549 xylose transporter AT 100.0 2.8E-64 6.1E-69 629.3 48.9 457 167-1077 18-490 (506)
22 PRK09700 D-allose transporter 100.0 3.4E-64 7.5E-69 629.6 48.2 458 167-1076 18-493 (510)
23 PRK10762 D-ribose transporter 100.0 6.2E-64 1.4E-68 625.5 49.9 449 167-1077 17-480 (501)
24 PRK10261 glutathione transport 100.0 1.9E-63 4.1E-68 633.1 51.2 487 167-1076 29-548 (623)
25 PRK15439 autoinducer 2 ABC tra 100.0 2.9E-63 6.2E-68 619.8 50.1 452 167-1076 24-487 (510)
26 TIGR03269 met_CoM_red_A2 methy 100.0 3.8E-63 8.1E-68 621.7 48.8 445 167-1076 13-512 (520)
27 PRK15134 microcin C ABC transp 100.0 7.1E-63 1.5E-67 620.0 50.4 464 167-1076 22-510 (529)
28 PTZ00243 ABC transporter; Prov 100.0 1.3E-62 2.9E-67 672.8 57.3 211 837-1076 1307-1528(1560)
29 PRK11288 araG L-arabinose tran 100.0 9.7E-63 2.1E-67 614.8 49.6 451 167-1078 17-482 (501)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.3E-62 2.8E-67 614.4 49.9 457 167-1076 14-487 (500)
31 TIGR01271 CFTR_protein cystic 100.0 2.5E-61 5.5E-66 660.4 59.7 210 837-1076 1216-1435(1490)
32 PRK10982 galactose/methyl gala 100.0 2.1E-61 4.6E-66 601.7 48.0 449 167-1076 11-475 (491)
33 PRK10938 putative molybdenum t 100.0 1.3E-60 2.9E-65 594.8 43.4 446 168-1073 17-484 (490)
34 PRK11819 putative ABC transpor 100.0 7.7E-59 1.7E-63 585.3 45.5 201 838-1075 324-527 (556)
35 COG4172 ABC-type uncharacteriz 100.0 3E-58 6.6E-63 512.0 43.4 471 165-1076 21-511 (534)
36 PRK15064 ABC transporter ATP-b 100.0 5.7E-58 1.2E-62 575.7 51.0 198 838-1076 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.2E-58 7E-63 579.7 46.7 201 838-1075 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.8E-55 6E-60 558.4 51.6 197 838-1076 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 7.3E-56 1.6E-60 555.2 41.9 211 838-1090 340-554 (590)
40 PRK11147 ABC transporter ATPas 100.0 1.4E-54 3E-59 553.7 53.7 202 838-1076 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 2E-54 4.4E-59 511.8 44.3 449 164-1072 18-481 (500)
42 PLN03073 ABC transporter F fam 100.0 5.8E-53 1.3E-57 537.4 46.7 200 838-1076 508-709 (718)
43 COG0488 Uup ATPase components 100.0 1.4E-52 3.1E-57 510.9 42.4 499 165-1075 14-519 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.8E-50 4E-55 466.5 38.8 457 166-1077 16-488 (501)
45 KOG0927 Predicted transporter 100.0 3.5E-43 7.6E-48 406.1 30.9 203 836-1076 387-591 (614)
46 COG1126 GlnQ ABC-type polar am 100.0 4.7E-44 1E-48 373.2 21.2 214 839-1076 3-220 (240)
47 COG1126 GlnQ ABC-type polar am 100.0 1.5E-43 3.3E-48 369.3 20.3 222 165-437 13-238 (240)
48 COG1127 Ttg2A ABC-type transpo 100.0 1E-41 2.2E-46 361.1 22.1 232 837-1092 7-250 (263)
49 COG1135 AbcC ABC-type metal io 100.0 1.4E-41 2.9E-46 372.0 22.9 224 165-439 17-246 (339)
50 COG1131 CcmA ABC-type multidru 100.0 1.8E-41 3.9E-46 391.4 23.6 210 863-1088 17-229 (293)
51 KOG0058 Peptide exporter, ABC 100.0 1E-41 2.3E-46 410.1 21.5 226 118-416 463-691 (716)
52 COG1125 OpuBA ABC-type proline 100.0 1.4E-41 3.1E-46 360.3 19.4 210 166-416 13-225 (309)
53 COG1135 AbcC ABC-type metal io 100.0 1.4E-41 3.1E-46 371.8 19.5 218 839-1076 2-226 (339)
54 COG1125 OpuBA ABC-type proline 100.0 2.7E-41 5.8E-46 358.3 18.8 213 839-1076 2-220 (309)
55 COG3839 MalK ABC-type sugar tr 100.0 3.3E-41 7.1E-46 385.6 20.2 217 169-436 18-235 (338)
56 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.9E-41 1.9E-45 366.2 22.5 217 838-1077 4-223 (254)
57 COG1116 TauB ABC-type nitrate/ 100.0 6.5E-41 1.4E-45 361.6 20.1 204 838-1067 3-207 (248)
58 TIGR01257 rim_protein retinal- 100.0 2.7E-36 5.8E-41 408.0 69.2 216 837-1076 927-1144(2272)
59 COG1120 FepC ABC-type cobalami 100.0 6.3E-41 1.4E-45 369.6 20.0 218 838-1077 2-224 (258)
60 COG3842 PotA ABC-type spermidi 100.0 3.4E-41 7.3E-46 387.5 18.4 223 166-438 17-240 (352)
61 COG1120 FepC ABC-type cobalami 100.0 9E-41 1.9E-45 368.4 20.6 210 166-415 14-227 (258)
62 COG1118 CysA ABC-type sulfate/ 100.0 7.8E-41 1.7E-45 364.8 19.1 224 165-437 13-240 (345)
63 COG4555 NatA ABC-type Na+ tran 100.0 1.3E-40 2.8E-45 341.6 16.6 201 864-1076 15-217 (245)
64 COG1136 SalX ABC-type antimicr 100.0 7.1E-40 1.5E-44 354.4 22.7 193 864-1068 18-219 (226)
65 COG1127 Ttg2A ABC-type transpo 100.0 9.8E-40 2.1E-44 346.0 22.9 211 165-416 19-235 (263)
66 COG1116 TauB ABC-type nitrate/ 100.0 4.3E-40 9.4E-45 355.2 19.8 192 167-403 16-207 (248)
67 COG3638 ABC-type phosphate/pho 100.0 4E-40 8.7E-45 348.1 18.3 220 838-1078 3-234 (258)
68 COG1118 CysA ABC-type sulfate/ 100.0 4.8E-40 1E-44 358.7 19.0 204 863-1076 14-222 (345)
69 COG1131 CcmA ABC-type multidru 100.0 1.1E-39 2.3E-44 376.6 23.0 211 166-419 17-229 (293)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-39 3.2E-44 356.6 22.9 207 168-416 18-227 (254)
71 COG3839 MalK ABC-type sugar tr 100.0 1.1E-39 2.4E-44 373.1 20.7 214 838-1076 3-218 (338)
72 COG2884 FtsE Predicted ATPase 100.0 2E-39 4.2E-44 330.6 19.8 213 839-1075 2-220 (223)
73 COG4555 NatA ABC-type Na+ tran 100.0 6.2E-40 1.3E-44 336.7 16.1 213 160-416 8-222 (245)
74 COG2274 SunT ABC-type bacterio 100.0 1.7E-39 3.7E-44 408.5 23.7 258 80-416 436-696 (709)
75 COG3638 ABC-type phosphate/pho 100.0 3.3E-39 7.2E-44 341.1 19.4 220 162-416 12-237 (258)
76 COG1117 PstB ABC-type phosphat 100.0 3.9E-39 8.5E-44 334.1 19.5 221 167-435 20-248 (253)
77 COG3842 PotA ABC-type spermidi 100.0 2.5E-39 5.3E-44 372.1 19.7 215 838-1076 5-221 (352)
78 PRK13537 nodulation ABC transp 100.0 1.6E-38 3.5E-43 370.4 24.8 215 837-1076 6-222 (306)
79 COG1136 SalX ABC-type antimicr 100.0 2.3E-38 4.9E-43 342.8 22.0 196 167-405 18-220 (226)
80 KOG0057 Mitochondrial Fe/S clu 100.0 5.2E-38 1.1E-42 365.3 23.5 229 112-416 343-574 (591)
81 COG1117 PstB ABC-type phosphat 100.0 2.3E-38 4.9E-43 328.5 18.1 218 837-1076 6-232 (253)
82 TIGR02314 ABC_MetN D-methionin 100.0 7.4E-38 1.6E-42 367.5 24.3 217 839-1076 2-225 (343)
83 TIGR02314 ABC_MetN D-methionin 100.0 1.5E-37 3.3E-42 364.9 26.6 206 167-415 18-229 (343)
84 PRK11432 fbpC ferric transport 100.0 1.7E-37 3.7E-42 366.4 26.1 206 167-415 19-225 (351)
85 TIGR03258 PhnT 2-aminoethylpho 100.0 1.8E-37 3.9E-42 367.3 26.3 208 167-416 18-228 (362)
86 TIGR03265 PhnT2 putative 2-ami 100.0 1.7E-37 3.7E-42 367.1 26.0 207 167-416 17-224 (353)
87 COG1122 CbiO ABC-type cobalt t 100.0 5.2E-38 1.1E-42 347.4 19.6 207 167-416 17-228 (235)
88 cd03261 ABC_Org_Solvent_Resist 100.0 1.3E-37 2.9E-42 351.1 23.2 202 864-1076 13-221 (235)
89 KOG0056 Heavy metal exporter H 100.0 1.1E-38 2.4E-43 360.4 14.3 250 87-416 509-761 (790)
90 COG1137 YhbG ABC-type (unclass 100.0 1E-38 2.2E-43 327.3 12.6 207 860-1076 13-223 (243)
91 PRK11650 ugpC glycerol-3-phosp 100.0 1E-37 2.2E-42 369.4 23.0 206 167-415 17-223 (356)
92 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-37 3E-42 367.9 24.0 214 838-1076 4-219 (353)
93 PRK11650 ugpC glycerol-3-phosp 100.0 1.6E-37 3.4E-42 367.8 24.1 214 839-1076 4-219 (356)
94 PRK11432 fbpC ferric transport 100.0 2.1E-37 4.5E-42 365.7 24.6 214 838-1076 6-221 (351)
95 PRK13536 nodulation factor exp 100.0 2.8E-37 6E-42 363.5 25.2 215 837-1076 40-256 (340)
96 TIGR01186 proV glycine betaine 100.0 2.8E-37 6E-42 364.4 24.8 208 166-416 5-219 (363)
97 KOG0055 Multidrug/pheromone ex 100.0 7.8E-38 1.7E-42 396.4 21.4 226 118-416 985-1213(1228)
98 PRK13537 nodulation ABC transp 100.0 4.9E-37 1.1E-41 358.0 26.5 206 167-416 20-227 (306)
99 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-37 2.8E-42 314.2 18.6 201 172-415 17-218 (231)
100 PRK09452 potA putrescine/sperm 100.0 4.5E-37 9.7E-42 365.1 26.1 218 167-435 27-245 (375)
101 COG2884 FtsE Predicted ATPase 100.0 1.8E-37 3.9E-42 316.3 18.9 208 159-410 7-220 (223)
102 TIGR03258 PhnT 2-aminoethylpho 100.0 3.3E-37 7.2E-42 365.0 24.3 214 838-1076 5-223 (362)
103 TIGR01188 drrA daunorubicin re 100.0 2.6E-37 5.6E-42 360.8 22.5 202 863-1076 5-208 (302)
104 cd03259 ABC_Carb_Solutes_like 100.0 4.1E-37 8.8E-42 341.9 22.6 199 864-1074 13-213 (213)
105 PRK11174 cysteine/glutathione 100.0 4.5E-37 9.7E-42 392.4 25.8 206 168-416 364-572 (588)
106 TIGR00960 3a0501s02 Type II (G 100.0 4.4E-37 9.5E-42 342.4 22.1 207 839-1067 2-214 (216)
107 COG1122 CbiO ABC-type cobalt t 100.0 2.5E-37 5.5E-42 341.9 19.8 215 838-1076 3-223 (235)
108 PRK09452 potA putrescine/sperm 100.0 7.5E-37 1.6E-41 363.2 24.6 214 838-1076 14-229 (375)
109 PRK10851 sulfate/thiosulfate t 100.0 7.2E-37 1.6E-41 361.8 24.2 216 839-1076 3-221 (353)
110 COG1124 DppF ABC-type dipeptid 100.0 7.9E-37 1.7E-41 326.2 21.8 205 168-416 21-231 (252)
111 COG2274 SunT ABC-type bacterio 100.0 1.1E-35 2.5E-40 374.0 36.0 217 832-1076 465-691 (709)
112 PRK10851 sulfate/thiosulfate t 100.0 1.5E-36 3.2E-41 359.2 26.3 210 167-415 15-225 (353)
113 cd03269 ABC_putative_ATPase Th 100.0 7.8E-37 1.7E-41 338.9 22.4 198 864-1074 13-210 (210)
114 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-36 3.1E-41 342.7 24.8 207 167-415 13-225 (235)
115 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-36 2.6E-41 339.8 23.9 200 864-1076 17-218 (220)
116 TIGR01288 nodI ATP-binding ABC 100.0 9.6E-37 2.1E-41 356.2 24.1 214 838-1076 4-219 (303)
117 COG1132 MdlB ABC-type multidru 100.0 5.1E-37 1.1E-41 389.7 23.2 225 117-416 325-552 (567)
118 cd03265 ABC_DrrA DrrA is the A 100.0 1.1E-36 2.4E-41 340.0 23.1 201 864-1076 13-216 (220)
119 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-36 2.5E-41 338.3 23.1 210 840-1074 2-213 (213)
120 KOG0062 ATPase component of AB 100.0 1.5E-36 3.2E-41 349.6 24.3 205 835-1075 359-563 (582)
121 TIGR01186 proV glycine betaine 100.0 1E-36 2.2E-41 359.6 23.7 202 863-1076 5-214 (363)
122 COG3840 ThiQ ABC-type thiamine 100.0 3.1E-37 6.8E-42 311.4 16.3 196 869-1076 17-214 (231)
123 COG0411 LivG ABC-type branched 100.0 3.4E-37 7.4E-42 329.4 17.4 224 162-416 12-239 (250)
124 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-36 3.3E-41 342.9 23.6 204 864-1076 13-227 (236)
125 COG1124 DppF ABC-type dipeptid 100.0 9.1E-37 2E-41 325.7 20.3 216 838-1076 3-226 (252)
126 PRK11153 metN DL-methionine tr 100.0 1.4E-36 3.1E-41 359.4 24.2 217 839-1076 2-225 (343)
127 PRK11607 potG putrescine trans 100.0 2.4E-36 5.2E-41 359.6 26.2 207 167-416 32-239 (377)
128 cd03218 ABC_YhbG The ABC trans 100.0 1.6E-36 3.5E-41 341.7 23.2 201 864-1076 13-217 (232)
129 PRK11607 potG putrescine trans 100.0 2.1E-36 4.5E-41 360.1 25.3 214 838-1076 19-234 (377)
130 PRK11000 maltose/maltodextrin 100.0 2.9E-36 6.3E-41 359.5 26.3 206 167-415 16-222 (369)
131 cd03266 ABC_NatA_sodium_export 100.0 1.5E-36 3.3E-41 338.6 22.4 215 839-1074 2-218 (218)
132 PRK11000 maltose/maltodextrin 100.0 1.7E-36 3.8E-41 361.5 24.1 214 838-1076 3-218 (369)
133 TIGR01188 drrA daunorubicin re 100.0 1.9E-36 4E-41 353.6 23.4 206 167-416 6-213 (302)
134 COG4988 CydD ABC-type transpor 100.0 1.8E-36 3.8E-41 359.4 23.2 206 168-416 335-543 (559)
135 PRK13536 nodulation factor exp 100.0 4.1E-36 8.9E-41 353.6 26.3 206 167-416 54-261 (340)
136 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-36 3.5E-41 338.4 21.7 192 864-1067 17-216 (218)
137 cd03296 ABC_CysA_sulfate_impor 100.0 3E-36 6.5E-41 340.9 24.1 217 838-1076 2-221 (239)
138 COG4559 ABC-type hemin transpo 100.0 1.4E-36 3.1E-41 314.3 19.4 207 167-415 14-229 (259)
139 TIGR03522 GldA_ABC_ATP gliding 100.0 2.3E-36 4.9E-41 352.4 23.6 212 839-1076 3-216 (301)
140 COG0410 LivF ABC-type branched 100.0 1.5E-36 3.3E-41 322.1 19.8 208 165-416 14-226 (237)
141 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-36 5.3E-41 346.9 23.2 204 861-1076 34-245 (269)
142 COG4152 ABC-type uncharacteriz 100.0 9.1E-37 2E-41 321.8 17.8 202 862-1076 13-214 (300)
143 PRK09536 btuD corrinoid ABC tr 100.0 1.9E-36 4.2E-41 361.4 23.0 217 838-1076 3-223 (402)
144 cd03268 ABC_BcrA_bacitracin_re 100.0 2.2E-36 4.7E-41 334.8 21.6 195 864-1074 13-208 (208)
145 PRK11153 metN DL-methionine tr 100.0 5.7E-36 1.2E-40 354.3 26.6 206 167-415 18-229 (343)
146 cd03234 ABCG_White The White s 100.0 5.4E-36 1.2E-40 335.8 24.9 221 839-1074 4-226 (226)
147 TIGR02673 FtsE cell division A 100.0 2.9E-36 6.4E-41 335.3 22.3 206 839-1067 2-213 (214)
148 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-36 5.7E-41 338.8 22.1 202 864-1076 13-224 (227)
149 cd03258 ABC_MetN_methionine_tr 100.0 3.4E-36 7.4E-41 339.3 23.0 217 839-1076 2-225 (233)
150 cd03256 ABC_PhnC_transporter A 100.0 2.8E-36 6.1E-41 341.8 21.9 204 864-1076 14-229 (241)
151 PRK09493 glnQ glutamine ABC tr 100.0 5.1E-36 1.1E-40 339.3 23.8 214 839-1076 2-220 (240)
152 cd03263 ABC_subfamily_A The AB 100.0 4.1E-36 9E-41 335.6 22.4 200 864-1076 15-216 (220)
153 cd03292 ABC_FtsE_transporter F 100.0 4E-36 8.7E-41 334.3 21.8 193 864-1067 14-212 (214)
154 PRK11629 lolD lipoprotein tran 100.0 1.1E-35 2.3E-40 335.1 25.5 217 838-1076 5-229 (233)
155 PRK13637 cbiO cobalt transport 100.0 6E-36 1.3E-40 346.6 24.1 218 839-1076 3-229 (287)
156 COG1137 YhbG ABC-type (unclass 100.0 5.3E-37 1.1E-41 314.8 13.4 210 165-416 15-228 (243)
157 cd03259 ABC_Carb_Solutes_like 100.0 6.5E-36 1.4E-40 332.2 23.3 200 167-409 13-213 (213)
158 TIGR01288 nodI ATP-binding ABC 100.0 9.6E-36 2.1E-40 347.7 25.8 206 167-416 17-224 (303)
159 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.3E-36 1.1E-40 339.5 22.8 201 864-1076 14-220 (242)
160 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-36 4.9E-41 333.8 19.2 191 864-1070 13-204 (205)
161 PRK11264 putative amino-acid A 100.0 7.7E-36 1.7E-40 340.0 24.1 214 839-1076 4-228 (250)
162 cd03265 ABC_DrrA DrrA is the A 100.0 9.6E-36 2.1E-40 332.5 24.3 205 167-414 13-219 (220)
163 PRK13643 cbiO cobalt transport 100.0 1.4E-35 3E-40 343.7 26.4 222 168-433 20-253 (288)
164 cd03224 ABC_TM1139_LivF_branch 100.0 5E-36 1.1E-40 335.4 21.5 199 864-1076 13-216 (222)
165 PRK11248 tauB taurine transpor 100.0 9.4E-36 2E-40 339.2 24.1 212 839-1076 2-215 (255)
166 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.9E-36 1.9E-40 386.3 26.9 205 167-416 466-673 (686)
167 COG0411 LivG ABC-type branched 100.0 2E-36 4.4E-41 323.5 17.2 207 861-1076 14-234 (250)
168 COG4559 ABC-type hemin transpo 100.0 2.9E-36 6.3E-41 312.0 17.6 214 839-1077 2-226 (259)
169 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-35 3.4E-40 335.0 25.4 210 167-415 15-225 (239)
170 COG4175 ProV ABC-type proline/ 100.0 2.7E-36 5.8E-41 328.9 18.1 221 167-438 41-268 (386)
171 TIGR02315 ABC_phnC phosphonate 100.0 4.7E-36 1E-40 340.4 21.0 204 864-1076 15-230 (243)
172 cd03219 ABC_Mj1267_LivG_branch 100.0 1.3E-35 2.8E-40 335.2 24.3 215 167-415 13-231 (236)
173 PRK13647 cbiO cobalt transport 100.0 9.6E-36 2.1E-40 342.7 23.3 215 838-1076 4-222 (274)
174 PRK11831 putative ABC transpor 100.0 1.2E-35 2.7E-40 341.3 24.2 215 838-1076 7-228 (269)
175 cd03218 ABC_YhbG The ABC trans 100.0 1.6E-35 3.6E-40 333.5 24.5 205 167-415 13-221 (232)
176 PRK13651 cobalt transporter AT 100.0 1.2E-35 2.7E-40 345.5 23.8 218 839-1076 3-249 (305)
177 PRK13634 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 342.9 25.3 218 167-427 20-249 (290)
178 PRK13634 cbiO cobalt transport 100.0 1E-35 2.3E-40 345.0 23.2 218 839-1076 3-230 (290)
179 cd03258 ABC_MetN_methionine_tr 100.0 2E-35 4.4E-40 333.0 24.7 205 168-415 19-229 (233)
180 PRK13637 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 343.0 24.4 218 167-427 20-248 (287)
181 PRK13643 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 343.4 24.0 217 839-1076 2-228 (288)
182 cd03264 ABC_drug_resistance_li 100.0 9.8E-36 2.1E-40 330.3 21.6 197 864-1074 13-211 (211)
183 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-35 3E-40 330.4 22.6 194 168-405 17-216 (216)
184 cd03262 ABC_HisP_GlnQ_permease 100.0 1E-35 2.3E-40 330.7 21.6 194 864-1067 13-211 (213)
185 PRK10908 cell division protein 100.0 1.6E-35 3.5E-40 331.2 23.1 208 839-1070 2-215 (222)
186 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-35 5.1E-40 327.8 24.3 199 168-409 14-213 (213)
187 cd03257 ABC_NikE_OppD_transpor 100.0 1.6E-35 3.4E-40 332.9 22.9 217 839-1074 2-228 (228)
188 COG4987 CydC ABC-type transpor 100.0 3.9E-36 8.4E-41 349.7 18.4 208 167-416 351-561 (573)
189 PRK13631 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 345.9 24.4 218 838-1076 21-260 (320)
190 PRK10895 lipopolysaccharide AB 100.0 1.4E-35 3.1E-40 335.9 22.6 214 839-1076 4-221 (241)
191 PRK13651 cobalt transporter AT 100.0 2.4E-35 5.3E-40 343.0 25.1 215 168-426 21-267 (305)
192 TIGR03522 GldA_ABC_ATP gliding 100.0 2.7E-35 5.9E-40 343.4 25.3 205 167-416 15-221 (301)
193 PRK10619 histidine/lysine/argi 100.0 2.4E-35 5.1E-40 337.2 24.3 215 838-1076 5-236 (257)
194 PRK10070 glycine betaine trans 100.0 2.9E-35 6.2E-40 351.1 26.0 206 167-415 41-253 (400)
195 PRK13636 cbiO cobalt transport 100.0 1.9E-35 4E-40 342.0 23.6 215 838-1076 5-226 (283)
196 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.2E-35 4.7E-40 339.1 24.0 208 165-415 35-249 (269)
197 cd03225 ABC_cobalt_CbiO_domain 100.0 9.3E-36 2E-40 330.6 20.0 193 864-1067 14-210 (211)
198 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-35 3.8E-40 336.4 22.6 206 838-1076 12-218 (257)
199 PRK13650 cbiO cobalt transport 100.0 4.1E-35 8.9E-40 338.4 25.9 215 168-426 21-242 (279)
200 cd03235 ABC_Metallic_Cations A 100.0 9.3E-36 2E-40 331.0 19.6 199 864-1074 12-213 (213)
201 TIGR00972 3a0107s01c2 phosphat 100.0 2.8E-35 6.1E-40 334.6 23.9 214 839-1076 2-227 (247)
202 PRK13646 cbiO cobalt transport 100.0 2.3E-35 5E-40 341.7 23.4 218 838-1076 2-230 (286)
203 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-35 7.8E-40 350.5 25.7 209 167-415 16-227 (402)
204 PRK13631 cbiO cobalt transport 100.0 4.4E-35 9.6E-40 342.8 25.9 217 167-427 39-279 (320)
205 cd03269 ABC_putative_ATPase Th 100.0 3E-35 6.5E-40 326.2 23.1 198 167-409 13-210 (210)
206 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.6E-35 7.8E-40 331.4 24.1 212 839-1076 2-216 (236)
207 cd03224 ABC_TM1139_LivF_branch 100.0 3.4E-35 7.4E-40 328.7 23.7 203 167-415 13-220 (222)
208 KOG0058 Peptide exporter, ABC 100.0 2.7E-36 5.9E-41 363.4 15.8 217 835-1076 462-686 (716)
209 PRK13650 cbiO cobalt transport 100.0 2.1E-35 4.5E-40 340.8 22.6 216 838-1076 4-224 (279)
210 COG0410 LivF ABC-type branched 100.0 1E-35 2.3E-40 315.7 18.3 202 862-1076 14-221 (237)
211 PRK13647 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 339.3 23.0 203 168-414 19-225 (274)
212 PRK11176 lipid transporter ATP 100.0 2.2E-35 4.8E-40 376.6 25.1 209 167-416 356-567 (582)
213 PRK13641 cbiO cobalt transport 100.0 3E-35 6.4E-40 341.0 23.8 219 838-1076 2-229 (287)
214 cd03260 ABC_PstB_phosphate_tra 100.0 2.4E-35 5.2E-40 331.0 22.2 204 167-413 13-226 (227)
215 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.5E-35 3.3E-40 386.0 23.8 205 168-416 493-700 (710)
216 TIGR03375 type_I_sec_LssB type 100.0 2.3E-35 5.1E-40 382.9 25.2 207 168-416 479-688 (694)
217 PRK11614 livF leucine/isoleuci 100.0 2.4E-35 5.1E-40 333.2 22.0 212 838-1076 5-221 (237)
218 TIGR02211 LolD_lipo_ex lipopro 100.0 3.5E-35 7.7E-40 328.3 23.2 210 839-1070 2-219 (221)
219 PRK13644 cbiO cobalt transport 100.0 2.8E-35 6.1E-40 338.9 22.9 213 839-1076 2-219 (274)
220 PRK15079 oligopeptide ABC tran 100.0 4.6E-35 1E-39 343.8 25.1 229 838-1076 8-246 (331)
221 cd03263 ABC_subfamily_A The AB 100.0 2.1E-35 4.5E-40 330.0 21.1 203 167-414 15-219 (220)
222 cd03293 ABC_NrtD_SsuB_transpor 100.0 3E-35 6.5E-40 328.5 22.3 201 167-412 17-219 (220)
223 cd03256 ABC_PhnC_transporter A 100.0 3.1E-35 6.7E-40 333.3 22.8 214 167-415 14-233 (241)
224 PRK11124 artP arginine transpo 100.0 3.6E-35 7.8E-40 332.8 23.2 213 839-1076 3-225 (242)
225 PRK10070 glycine betaine trans 100.0 3E-35 6.5E-40 350.9 23.7 201 864-1076 41-249 (400)
226 TIGR03005 ectoine_ehuA ectoine 100.0 3.8E-35 8.3E-40 334.5 23.3 214 839-1076 1-231 (252)
227 PRK11831 putative ABC transpor 100.0 7.7E-35 1.7E-39 334.7 26.0 207 167-415 20-232 (269)
228 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-35 5.5E-40 381.8 24.4 206 167-416 494-702 (711)
229 TIGR03740 galliderm_ABC gallid 100.0 5E-35 1.1E-39 327.4 23.5 197 864-1077 13-209 (223)
230 COG4618 ArpD ABC-type protease 100.0 3.4E-35 7.5E-40 338.2 22.4 236 110-418 324-562 (580)
231 TIGR03415 ABC_choXWV_ATP choli 100.0 4.6E-35 9.9E-40 346.9 24.2 208 165-415 35-253 (382)
232 PRK14247 phosphate ABC transpo 100.0 6.9E-35 1.5E-39 332.2 24.8 217 838-1076 3-229 (250)
233 PRK14273 phosphate ABC transpo 100.0 6.2E-35 1.4E-39 333.2 24.4 215 838-1076 7-233 (254)
234 COG4525 TauB ABC-type taurine 100.0 2.3E-35 4.9E-40 300.7 18.3 200 864-1076 18-219 (259)
235 PRK09493 glnQ glutamine ABC tr 100.0 9.1E-35 2E-39 329.1 25.4 205 167-415 14-224 (240)
236 PRK11300 livG leucine/isoleuci 100.0 4.4E-35 9.5E-40 334.8 23.0 217 838-1076 5-238 (255)
237 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.4E-35 9.5E-40 332.0 22.7 206 167-415 14-224 (242)
238 PRK13548 hmuV hemin importer A 100.0 4.7E-35 1E-39 334.4 23.0 213 839-1076 3-225 (258)
239 PRK13652 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 337.2 23.9 214 839-1076 4-222 (277)
240 PRK14267 phosphate ABC transpo 100.0 6.8E-35 1.5E-39 332.8 24.3 220 838-1076 4-232 (253)
241 TIGR02315 ABC_phnC phosphonate 100.0 3E-35 6.5E-40 333.8 21.2 213 167-414 15-233 (243)
242 PRK11160 cysteine/glutathione 100.0 4E-35 8.7E-40 371.8 24.7 206 168-416 354-562 (574)
243 PRK14268 phosphate ABC transpo 100.0 6.8E-35 1.5E-39 333.4 24.2 214 838-1076 12-237 (258)
244 cd03268 ABC_BcrA_bacitracin_re 100.0 5.5E-35 1.2E-39 323.6 22.7 195 167-409 13-208 (208)
245 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-34 2.6E-39 327.1 25.7 206 167-416 14-221 (236)
246 PRK11629 lolD lipoprotein tran 100.0 1.2E-34 2.6E-39 326.5 25.5 201 167-411 22-229 (233)
247 cd03266 ABC_NatA_sodium_export 100.0 5.8E-35 1.3E-39 325.9 22.7 198 168-409 19-218 (218)
248 TIGR01193 bacteriocin_ABC ABC- 100.0 3.1E-35 6.6E-40 382.7 23.8 207 168-416 488-697 (708)
249 PRK13646 cbiO cobalt transport 100.0 8.4E-35 1.8E-39 337.0 24.9 207 167-416 20-235 (286)
250 PRK10790 putative multidrug tr 100.0 6.9E-35 1.5E-39 372.4 26.6 206 168-416 355-563 (592)
251 TIGR01978 sufC FeS assembly AT 100.0 6.5E-35 1.4E-39 331.1 23.5 207 864-1076 13-229 (243)
252 PRK11264 putative amino-acid A 100.0 1E-34 2.2E-39 330.8 25.1 204 168-415 17-232 (250)
253 TIGR03411 urea_trans_UrtD urea 100.0 6.4E-35 1.4E-39 330.8 23.4 215 839-1076 3-226 (242)
254 PRK13638 cbiO cobalt transport 100.0 6.2E-35 1.3E-39 336.1 23.3 213 839-1076 2-220 (271)
255 PRK00635 excinuclease ABC subu 100.0 1.9E-33 4E-38 374.9 40.7 134 935-1076 759-901 (1809)
256 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.9E-35 1.1E-39 324.7 21.6 194 869-1074 16-211 (211)
257 PRK15079 oligopeptide ABC tran 100.0 1.3E-34 2.8E-39 340.0 26.2 208 167-415 34-250 (331)
258 PRK13635 cbiO cobalt transport 100.0 7.4E-35 1.6E-39 336.1 23.7 215 838-1076 5-224 (279)
259 PRK09473 oppD oligopeptide tra 100.0 1.3E-34 2.8E-39 340.3 26.0 214 167-416 29-251 (330)
260 KOG0066 eIF2-interacting prote 100.0 6.1E-34 1.3E-38 317.6 29.8 202 835-1076 583-786 (807)
261 COG4525 TauB ABC-type taurine 100.0 6.6E-35 1.4E-39 297.3 20.1 205 167-416 18-224 (259)
262 PRK11231 fecE iron-dicitrate t 100.0 5.7E-35 1.2E-39 333.6 22.1 216 839-1076 3-222 (255)
263 PRK13635 cbiO cobalt transport 100.0 1.5E-34 3.4E-39 333.4 25.8 216 167-426 20-242 (279)
264 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.7E-35 7.9E-40 327.5 19.8 195 167-405 17-218 (218)
265 PRK00349 uvrA excinuclease ABC 100.0 1.7E-33 3.8E-38 363.0 38.1 123 938-1076 791-922 (943)
266 cd03226 ABC_cobalt_CbiO_domain 100.0 4.3E-35 9.4E-40 323.6 20.0 192 167-406 13-205 (205)
267 PRK14242 phosphate transporter 100.0 1.4E-34 3.1E-39 330.1 24.9 221 836-1076 4-232 (253)
268 TIGR01184 ntrCD nitrate transp 100.0 6.8E-35 1.5E-39 327.5 21.8 198 867-1076 1-199 (230)
269 cd03264 ABC_drug_resistance_li 100.0 8.8E-35 1.9E-39 322.7 22.3 196 168-409 14-211 (211)
270 cd03233 ABC_PDR_domain1 The pl 100.0 1E-34 2.2E-39 319.3 22.6 196 838-1074 3-202 (202)
271 COG0444 DppD ABC-type dipeptid 100.0 1.8E-34 3.9E-39 322.1 24.6 233 166-441 17-260 (316)
272 PRK13649 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 335.8 23.9 217 839-1076 3-229 (280)
273 PTZ00265 multidrug resistance 100.0 4.3E-35 9.4E-40 399.1 23.7 213 167-416 1181-1452(1466)
274 PRK10253 iron-enterobactin tra 100.0 7.9E-35 1.7E-39 334.1 22.2 217 838-1076 7-228 (265)
275 PRK10895 lipopolysaccharide AB 100.0 1.5E-34 3.4E-39 327.4 24.3 206 167-415 16-225 (241)
276 PRK09984 phosphonate/organopho 100.0 1E-34 2.2E-39 332.8 23.1 219 838-1076 4-237 (262)
277 PRK10584 putative ABC transpor 100.0 1.8E-34 4E-39 324.1 24.6 213 838-1072 6-226 (228)
278 PRK14241 phosphate transporter 100.0 1.5E-34 3.2E-39 330.8 24.2 217 838-1076 4-237 (258)
279 PRK13632 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 333.2 23.8 215 838-1076 7-226 (271)
280 PRK10575 iron-hydroxamate tran 100.0 9.5E-35 2.1E-39 333.4 22.6 217 838-1076 11-232 (265)
281 TIGR03410 urea_trans_UrtE urea 100.0 8.2E-35 1.8E-39 327.4 21.7 198 864-1076 13-216 (230)
282 PRK10744 pstB phosphate transp 100.0 1.6E-34 3.5E-39 330.7 24.3 220 833-1076 8-239 (260)
283 COG1245 Predicted ATPase, RNas 100.0 8E-34 1.7E-38 321.4 29.4 173 867-1065 357-530 (591)
284 TIGR03415 ABC_choXWV_ATP choli 100.0 9.2E-35 2E-39 344.3 22.9 203 862-1076 35-249 (382)
285 TIGR02769 nickel_nikE nickel i 100.0 1.4E-34 3E-39 332.1 23.7 223 839-1076 3-235 (265)
286 PRK13639 cbiO cobalt transport 100.0 1.2E-34 2.7E-39 333.9 23.4 214 839-1076 2-221 (275)
287 PRK14245 phosphate ABC transpo 100.0 1.8E-34 3.9E-39 328.6 24.4 219 838-1076 3-229 (250)
288 cd03232 ABC_PDR_domain2 The pl 100.0 1E-34 2.2E-39 316.8 21.4 190 838-1074 3-192 (192)
289 PRK11248 tauB taurine transpor 100.0 2.4E-34 5.1E-39 327.7 25.0 201 167-412 14-216 (255)
290 cd03267 ABC_NatA_like Similar 100.0 1.4E-34 3.1E-39 326.2 22.7 201 862-1074 32-236 (236)
291 cd03300 ABC_PotA_N PotA is an 100.0 1.8E-34 4E-39 324.7 23.6 201 864-1076 13-215 (232)
292 PRK13636 cbiO cobalt transport 100.0 1E-34 2.2E-39 335.9 22.0 206 168-416 20-231 (283)
293 PRK11022 dppD dipeptide transp 100.0 2.5E-34 5.4E-39 337.7 25.5 214 167-416 20-243 (326)
294 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-34 2.5E-39 331.3 22.0 216 839-1076 2-221 (256)
295 TIGR03410 urea_trans_UrtE urea 100.0 2.1E-34 4.5E-39 324.1 23.6 202 167-414 13-219 (230)
296 PRK14237 phosphate transporter 100.0 2.8E-34 6.1E-39 329.7 25.1 224 833-1076 15-246 (267)
297 cd03233 ABC_PDR_domain1 The pl 100.0 2.3E-34 4.9E-39 316.6 23.3 179 166-409 19-202 (202)
298 PRK11614 livF leucine/isoleuci 100.0 2.2E-34 4.9E-39 325.3 23.8 203 167-415 18-225 (237)
299 PRK11308 dppF dipeptide transp 100.0 2.4E-34 5.1E-39 337.6 24.8 225 838-1076 5-239 (327)
300 PRK13648 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 331.1 24.0 215 838-1076 7-226 (269)
301 PRK13644 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 334.1 21.3 203 168-415 16-223 (274)
302 TIGR01277 thiQ thiamine ABC tr 100.0 2.3E-34 5E-39 319.7 23.0 198 866-1075 13-212 (213)
303 cd03292 ABC_FtsE_transporter F 100.0 9.8E-35 2.1E-39 323.1 20.0 195 167-405 14-214 (214)
304 TIGR00972 3a0107s01c2 phosphat 100.0 4.2E-34 9.2E-39 325.0 25.6 206 168-415 15-231 (247)
305 PRK11247 ssuB aliphatic sulfon 100.0 2.7E-34 5.8E-39 326.7 23.9 194 168-412 26-219 (257)
306 cd03267 ABC_NatA_like Similar 100.0 3.1E-34 6.7E-39 323.4 24.1 232 122-409 2-236 (236)
307 PRK13549 xylose transporter AT 100.0 1.5E-34 3.3E-39 361.6 23.9 221 838-1078 5-229 (506)
308 PRK14256 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 325.5 26.0 220 838-1076 4-231 (252)
309 PRK13645 cbiO cobalt transport 100.0 2.1E-34 4.5E-39 334.7 23.2 219 838-1076 6-235 (289)
310 PRK11022 dppD dipeptide transp 100.0 3.6E-34 7.7E-39 336.3 25.5 224 838-1076 3-238 (326)
311 PRK09473 oppD oligopeptide tra 100.0 3.3E-34 7.1E-39 336.9 25.1 224 838-1076 12-246 (330)
312 PRK14235 phosphate transporter 100.0 2.8E-34 6E-39 329.8 24.0 220 838-1076 19-246 (267)
313 PRK13640 cbiO cobalt transport 100.0 2.1E-34 4.5E-39 333.0 23.1 217 838-1076 5-227 (282)
314 PRK14257 phosphate ABC transpo 100.0 4.1E-34 8.8E-39 335.6 25.9 210 168-415 96-312 (329)
315 PRK11308 dppF dipeptide transp 100.0 4.4E-34 9.5E-39 335.4 26.1 208 167-416 28-244 (327)
316 COG4181 Predicted ABC-type tra 100.0 9.1E-35 2E-39 290.4 17.2 198 861-1071 20-225 (228)
317 TIGR02673 FtsE cell division A 100.0 1.2E-34 2.6E-39 322.4 20.0 194 167-404 15-214 (214)
318 TIGR03608 L_ocin_972_ABC putat 100.0 1.3E-34 2.8E-39 320.2 20.2 189 864-1064 11-206 (206)
319 PRK13632 cbiO cobalt transport 100.0 3.7E-34 8E-39 329.4 24.7 205 167-415 22-230 (271)
320 PRK10619 histidine/lysine/argi 100.0 4.8E-34 1E-38 326.4 25.4 205 167-415 18-240 (257)
321 PRK13633 cobalt transporter AT 100.0 2.2E-34 4.8E-39 332.7 22.8 219 838-1076 4-228 (280)
322 PRK13548 hmuV hemin importer A 100.0 4.7E-34 1E-38 326.2 25.2 206 167-415 15-229 (258)
323 PRK13633 cobalt transporter AT 100.0 3.9E-34 8.5E-39 330.6 24.8 206 167-416 23-233 (280)
324 PRK14250 phosphate ABC transpo 100.0 1.9E-34 4.1E-39 326.4 21.6 209 838-1076 3-216 (241)
325 TIGR03005 ectoine_ehuA ectoine 100.0 4E-34 8.8E-39 326.1 24.5 206 167-415 13-235 (252)
326 TIGR00968 3a0106s01 sulfate AB 100.0 3E-34 6.5E-39 323.9 23.2 201 864-1076 13-215 (237)
327 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-34 8.1E-39 320.1 23.7 196 167-406 18-220 (221)
328 cd03299 ABC_ModC_like Archeal 100.0 3.4E-34 7.4E-39 323.0 23.5 199 866-1076 14-214 (235)
329 PRK13641 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 333.7 22.5 205 167-415 20-233 (287)
330 PRK13547 hmuV hemin importer A 100.0 2E-34 4.4E-39 330.5 21.9 218 839-1076 2-239 (272)
331 PRK14269 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 325.8 23.2 219 839-1076 3-225 (246)
332 PRK14273 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 325.5 25.3 206 168-415 21-237 (254)
333 PRK13652 cbiO cobalt transport 100.0 2.1E-34 4.6E-39 332.3 22.1 205 168-415 18-226 (277)
334 PRK13638 cbiO cobalt transport 100.0 5.9E-34 1.3E-38 327.9 25.7 205 167-415 14-224 (271)
335 TIGR03411 urea_trans_UrtD urea 100.0 5.3E-34 1.1E-38 323.3 24.8 212 167-415 15-230 (242)
336 PRK10771 thiQ thiamine transpo 100.0 3E-34 6.5E-39 323.1 22.5 211 839-1076 2-214 (232)
337 PRK14268 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 325.0 25.7 205 168-415 26-241 (258)
338 PRK13649 cbiO cobalt transport 100.0 9.1E-34 2E-38 328.1 26.7 204 168-415 21-233 (280)
339 PRK13639 cbiO cobalt transport 100.0 4.2E-34 9.2E-39 329.5 23.7 204 168-415 16-225 (275)
340 TIGR01842 type_I_sec_PrtD type 100.0 5.6E-34 1.2E-38 360.0 27.0 208 168-416 332-542 (544)
341 PRK11124 artP arginine transpo 100.0 5.4E-34 1.2E-38 323.2 24.2 203 168-414 16-228 (242)
342 COG4988 CydD ABC-type transpor 100.0 1.3E-34 2.9E-39 343.5 19.9 213 835-1076 317-538 (559)
343 cd03234 ABCG_White The White s 100.0 3.5E-34 7.6E-39 321.2 22.3 202 167-409 20-226 (226)
344 PRK14242 phosphate transporter 100.0 6.5E-34 1.4E-38 324.7 24.9 210 168-415 20-236 (253)
345 PRK13648 cbiO cobalt transport 100.0 8.2E-34 1.8E-38 326.4 25.8 204 168-415 23-230 (269)
346 cd03213 ABCG_EPDR ABCG transpo 100.0 4.3E-34 9.4E-39 312.3 22.3 190 838-1074 3-194 (194)
347 PRK14259 phosphate ABC transpo 100.0 4.4E-34 9.5E-39 328.3 23.5 219 837-1076 12-248 (269)
348 PRK10908 cell division protein 100.0 2.4E-34 5.3E-39 321.7 20.8 196 167-406 15-216 (222)
349 TIGR02142 modC_ABC molybdenum 100.0 2.3E-34 5.1E-39 342.3 21.8 194 869-1076 15-216 (354)
350 PRK14250 phosphate ABC transpo 100.0 6.8E-34 1.5E-38 321.8 24.5 200 168-415 17-220 (241)
351 PRK11300 livG leucine/isoleuci 100.0 7.6E-34 1.6E-38 324.7 25.0 221 167-415 18-242 (255)
352 PRK15112 antimicrobial peptide 100.0 4.6E-34 1E-38 327.9 23.2 224 838-1076 4-234 (267)
353 cd03297 ABC_ModC_molybdenum_tr 100.0 3.4E-34 7.4E-39 318.6 21.4 191 869-1074 16-214 (214)
354 TIGR03740 galliderm_ABC gallid 100.0 7.1E-34 1.5E-38 318.2 24.0 198 167-413 13-210 (223)
355 PRK14274 phosphate ABC transpo 100.0 6.8E-34 1.5E-38 325.5 24.3 219 838-1076 12-238 (259)
356 COG4175 ProV ABC-type proline/ 100.0 1.1E-34 2.3E-39 316.4 16.6 199 866-1076 43-249 (386)
357 PRK14239 phosphate transporter 100.0 6.9E-34 1.5E-38 324.4 24.2 219 838-1076 5-231 (252)
358 PRK15093 antimicrobial peptide 100.0 6.3E-34 1.4E-38 335.4 24.6 226 838-1076 3-243 (330)
359 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-32 2.4E-37 357.4 38.7 209 837-1076 450-668 (686)
360 PRK14247 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.5 25.5 212 168-415 17-233 (250)
361 TIGR02770 nickel_nikD nickel i 100.0 4.5E-34 9.7E-39 321.1 22.2 201 866-1076 1-210 (230)
362 cd03257 ABC_NikE_OppD_transpor 100.0 4.5E-34 9.7E-39 321.1 22.1 201 168-409 19-228 (228)
363 PRK14270 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 323.9 24.0 218 838-1076 4-230 (251)
364 PRK13640 cbiO cobalt transport 100.0 1E-33 2.2E-38 327.3 25.6 208 168-416 21-232 (282)
365 PRK14240 phosphate transporter 100.0 8.3E-34 1.8E-38 323.3 24.3 219 838-1076 3-229 (250)
366 KOG0057 Mitochondrial Fe/S clu 100.0 7.7E-35 1.7E-39 339.0 16.1 212 835-1076 348-569 (591)
367 PRK14244 phosphate ABC transpo 100.0 6.5E-34 1.4E-38 324.2 23.4 207 864-1076 18-232 (251)
368 PRK11144 modC molybdate transp 100.0 4.5E-34 9.7E-39 339.3 22.8 195 172-415 16-217 (352)
369 cd03300 ABC_PotA_N PotA is an 100.0 1.4E-33 3E-38 317.6 25.3 206 167-415 13-219 (232)
370 PRK11144 modC molybdate transp 100.0 3.1E-34 6.7E-39 340.7 21.1 190 869-1076 16-213 (352)
371 PRK14262 phosphate ABC transpo 100.0 8.8E-34 1.9E-38 323.0 24.0 219 838-1076 3-229 (250)
372 TIGR01846 type_I_sec_HlyB type 100.0 5.1E-34 1.1E-38 370.1 25.0 207 168-416 471-680 (694)
373 PRK14267 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 322.5 25.2 212 168-415 18-236 (253)
374 PRK13657 cyclic beta-1,2-gluca 100.0 6.2E-34 1.3E-38 363.1 25.3 207 168-416 349-558 (588)
375 PRK13642 cbiO cobalt transport 100.0 8.4E-34 1.8E-38 327.4 23.9 216 838-1076 4-224 (277)
376 PRK10575 iron-hydroxamate tran 100.0 7.7E-34 1.7E-38 325.9 23.4 209 168-415 25-236 (265)
377 TIGR02769 nickel_nikE nickel i 100.0 8.5E-34 1.8E-38 325.6 23.7 207 167-415 24-239 (265)
378 TIGR02770 nickel_nikD nickel i 100.0 6.9E-34 1.5E-38 319.6 22.4 204 169-415 1-214 (230)
379 TIGR01978 sufC FeS assembly AT 100.0 1.2E-33 2.6E-38 320.7 24.5 213 167-415 13-233 (243)
380 PRK14253 phosphate ABC transpo 100.0 9.8E-34 2.1E-38 322.5 23.8 219 838-1076 3-228 (249)
381 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-33 2.4E-38 323.2 24.3 208 167-415 14-225 (256)
382 PRK15093 antimicrobial peptide 100.0 1.4E-33 3E-38 332.5 25.9 218 167-415 20-247 (330)
383 PRK14236 phosphate transporter 100.0 1.2E-33 2.7E-38 325.3 24.8 220 837-1076 24-251 (272)
384 PRK10762 D-ribose transporter 100.0 5.3E-34 1.2E-38 356.4 23.5 218 838-1077 4-226 (501)
385 PRK11231 fecE iron-dicitrate t 100.0 1E-33 2.3E-38 323.2 23.9 209 167-415 15-226 (255)
386 PRK14260 phosphate ABC transpo 100.0 9.4E-34 2E-38 324.2 23.6 216 838-1076 7-238 (259)
387 PRK14257 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 331.5 25.1 221 837-1076 79-308 (329)
388 PRK14258 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 323.8 24.2 221 838-1076 7-240 (261)
389 PRK10584 putative ABC transpor 100.0 1.5E-33 3.3E-38 316.7 24.7 197 168-408 24-227 (228)
390 TIGR02982 heterocyst_DevA ABC 100.0 7.3E-34 1.6E-38 317.3 22.1 209 839-1067 2-217 (220)
391 PRK09984 phosphonate/organopho 100.0 1.1E-33 2.3E-38 324.4 24.0 216 167-414 17-240 (262)
392 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.8E-34 1.7E-38 317.5 22.2 193 861-1074 32-224 (224)
393 COG5265 ATM1 ABC-type transpor 100.0 9.9E-35 2.1E-39 327.4 15.0 209 166-416 275-486 (497)
394 PRK10253 iron-enterobactin tra 100.0 1.3E-33 2.7E-38 324.1 24.5 209 167-415 20-232 (265)
395 TIGR01184 ntrCD nitrate transp 100.0 6E-34 1.3E-38 319.9 21.3 202 170-414 1-202 (230)
396 PRK13543 cytochrome c biogenes 100.0 6.8E-34 1.5E-38 315.9 21.5 202 838-1066 11-212 (214)
397 PRK14272 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 321.7 24.7 216 838-1076 4-231 (252)
398 PRK11701 phnK phosphonate C-P 100.0 1.2E-33 2.5E-38 323.4 23.9 215 838-1076 6-236 (258)
399 TIGR02203 MsbA_lipidA lipid A 100.0 6.8E-34 1.5E-38 362.5 24.3 208 168-416 346-556 (571)
400 PRK10418 nikD nickel transport 100.0 1.2E-33 2.6E-38 322.4 23.8 213 838-1076 4-225 (254)
401 TIGR02142 modC_ABC molybdenum 100.0 9.8E-34 2.1E-38 337.0 23.9 200 172-416 15-221 (354)
402 PRK10789 putative multidrug tr 100.0 9.2E-34 2E-38 359.3 25.1 207 168-416 329-538 (569)
403 PRK14269 phosphate ABC transpo 100.0 2E-33 4.3E-38 319.2 25.0 212 167-415 15-229 (246)
404 PRK14245 phosphate ABC transpo 100.0 2E-33 4.3E-38 320.0 25.1 210 167-415 16-233 (250)
405 PRK10744 pstB phosphate transp 100.0 1.9E-33 4.2E-38 321.8 25.1 210 168-415 27-243 (260)
406 PRK13645 cbiO cobalt transport 100.0 1.3E-33 2.8E-38 328.1 23.9 205 168-415 25-239 (289)
407 cd03262 ABC_HisP_GlnQ_permease 100.0 8.8E-34 1.9E-38 315.2 21.5 195 167-405 13-213 (213)
408 PRK10771 thiQ thiamine transpo 100.0 2.2E-33 4.8E-38 316.0 25.0 202 172-416 17-219 (232)
409 PRK14271 phosphate ABC transpo 100.0 2.7E-33 5.9E-38 322.6 26.2 219 838-1076 21-246 (276)
410 cd03225 ABC_cobalt_CbiO_domain 100.0 7.6E-34 1.7E-38 315.2 20.9 194 167-404 14-211 (211)
411 PRK14235 phosphate transporter 100.0 2.8E-33 6.1E-38 321.4 26.2 211 168-415 33-250 (267)
412 PRK13538 cytochrome c biogenes 100.0 7.3E-34 1.6E-38 313.4 20.4 199 839-1064 2-202 (204)
413 PRK09700 D-allose transporter 100.0 7.3E-34 1.6E-38 356.2 23.1 218 838-1077 5-230 (510)
414 TIGR00968 3a0106s01 sulfate AB 100.0 2.4E-33 5.1E-38 316.6 24.9 205 168-415 14-219 (237)
415 PRK14237 phosphate transporter 100.0 3.5E-33 7.7E-38 320.6 26.5 210 168-415 34-250 (267)
416 cd03231 ABC_CcmA_heme_exporter 100.0 7.1E-34 1.5E-38 312.6 19.8 184 864-1064 13-198 (201)
417 PRK14239 phosphate transporter 100.0 3.2E-33 6.9E-38 318.9 25.8 210 168-415 19-235 (252)
418 PRK14241 phosphate transporter 100.0 2.5E-33 5.5E-38 320.6 25.0 211 168-415 18-241 (258)
419 TIGR00630 uvra excinuclease AB 100.0 3.6E-32 7.7E-37 350.3 38.4 123 938-1076 789-920 (924)
420 TIGR01193 bacteriocin_ABC ABC- 100.0 5.5E-32 1.2E-36 352.2 40.8 211 837-1076 472-692 (708)
421 PRK14249 phosphate ABC transpo 100.0 2E-33 4.4E-38 320.2 23.9 219 838-1076 4-230 (251)
422 PRK14256 phosphate ABC transpo 100.0 3.8E-33 8.2E-38 318.2 26.1 212 167-415 17-235 (252)
423 PRK14270 phosphate ABC transpo 100.0 3.3E-33 7.2E-38 318.4 25.6 211 167-415 17-234 (251)
424 PRK13642 cbiO cobalt transport 100.0 3.7E-33 8.1E-38 322.0 26.2 204 168-415 21-228 (277)
425 cd03235 ABC_Metallic_Cations A 100.0 9.3E-34 2E-38 315.0 20.4 200 167-409 12-213 (213)
426 PRK14261 phosphate ABC transpo 100.0 2.3E-33 4.9E-38 320.2 23.8 219 838-1076 6-232 (253)
427 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.6E-32 7.8E-37 354.3 38.3 210 837-1076 476-695 (710)
428 PRK14263 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 320.4 24.0 218 838-1076 8-240 (261)
429 TIGR01192 chvA glucan exporter 100.0 1.7E-33 3.7E-38 357.4 24.9 207 168-416 349-558 (585)
430 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.7E-33 3.8E-38 312.3 21.8 195 172-409 16-211 (211)
431 cd03299 ABC_ModC_like Archeal 100.0 2.8E-33 6E-38 315.6 23.7 204 169-415 14-218 (235)
432 PRK14275 phosphate ABC transpo 100.0 2.4E-33 5.1E-38 324.7 23.7 215 838-1076 39-265 (286)
433 PLN03130 ABC transporter C fam 100.0 1.7E-33 3.6E-38 387.2 26.3 206 168-416 1253-1461(1622)
434 PRK14248 phosphate ABC transpo 100.0 2.4E-33 5.2E-38 322.5 23.5 215 838-1076 21-247 (268)
435 PRK14274 phosphate ABC transpo 100.0 4E-33 8.6E-38 319.2 25.1 210 168-415 26-242 (259)
436 PRK14251 phosphate ABC transpo 100.0 2.6E-33 5.5E-38 319.4 23.4 215 838-1076 4-230 (251)
437 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-33 3.9E-38 352.0 24.2 219 839-1077 2-226 (500)
438 PRK15056 manganese/iron transp 100.0 1.7E-33 3.7E-38 324.1 22.0 217 838-1076 6-225 (272)
439 PRK15112 antimicrobial peptide 100.0 2.2E-33 4.7E-38 322.4 22.8 207 167-415 26-238 (267)
440 TIGR01166 cbiO cobalt transpor 100.0 1.3E-33 2.7E-38 308.1 19.8 178 864-1051 5-188 (190)
441 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-33 3.2E-38 352.6 23.2 211 838-1077 11-225 (510)
442 COG4604 CeuD ABC-type enteroch 100.0 1.1E-34 2.3E-39 296.6 10.5 204 862-1077 12-221 (252)
443 PRK14255 phosphate ABC transpo 100.0 4.3E-33 9.4E-38 317.8 24.9 219 838-1076 5-231 (252)
444 PRK14262 phosphate ABC transpo 100.0 4.3E-33 9.3E-38 317.4 24.8 211 167-415 16-233 (250)
445 COG4148 ModC ABC-type molybdat 100.0 3.4E-34 7.5E-39 307.3 14.7 197 171-416 15-218 (352)
446 PRK10419 nikE nickel transport 100.0 3.1E-33 6.8E-38 321.1 23.7 223 839-1076 4-236 (268)
447 COG0444 DppD ABC-type dipeptid 100.0 2.6E-33 5.6E-38 312.8 22.2 223 839-1076 2-238 (316)
448 cd03230 ABC_DR_subfamily_A Thi 100.0 1.4E-33 3E-38 302.8 19.2 156 865-1067 14-171 (173)
449 cd03252 ABCC_Hemolysin The ABC 100.0 7.3E-34 1.6E-38 321.2 17.9 196 864-1076 15-220 (237)
450 PRK11701 phnK phosphonate C-P 100.0 5.6E-33 1.2E-37 317.7 25.4 206 168-415 20-240 (258)
451 PRK14254 phosphate ABC transpo 100.0 4.3E-33 9.2E-38 322.2 24.5 213 838-1076 39-264 (285)
452 PRK10247 putative ABC transpor 100.0 1.9E-33 4.1E-38 314.9 20.8 203 838-1068 7-214 (225)
453 PRK14248 phosphate ABC transpo 100.0 8.4E-33 1.8E-37 318.0 26.7 207 168-415 35-251 (268)
454 TIGR01846 type_I_sec_HlyB type 100.0 7.1E-32 1.5E-36 350.1 38.4 212 837-1076 454-675 (694)
455 PRK11288 araG L-arabinose tran 100.0 2.3E-33 4.9E-38 350.7 23.6 216 838-1075 4-223 (501)
456 PLN03232 ABC transporter C fam 100.0 2.1E-33 4.5E-38 386.7 25.4 206 168-416 1250-1458(1495)
457 PRK14259 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 319.5 24.4 209 168-416 27-253 (269)
458 PRK14240 phosphate transporter 100.0 6.9E-33 1.5E-37 315.7 25.2 210 168-415 17-233 (250)
459 PRK14238 phosphate transporter 100.0 4.1E-33 9E-38 320.6 23.6 218 838-1076 24-250 (271)
460 TIGR02204 MsbA_rel ABC transpo 100.0 2.6E-33 5.7E-38 357.3 24.1 208 167-416 353-563 (576)
461 COG4152 ABC-type uncharacteriz 100.0 1.5E-33 3.2E-38 297.5 17.9 211 163-418 11-221 (300)
462 PRK14265 phosphate ABC transpo 100.0 4.8E-33 1E-37 320.4 23.9 220 836-1076 18-253 (274)
463 PRK03695 vitamin B12-transport 100.0 3.3E-33 7.3E-38 317.3 22.3 197 866-1076 11-217 (248)
464 TIGR02323 CP_lyasePhnK phospho 100.0 4.2E-33 9E-38 318.1 23.0 215 838-1076 3-233 (253)
465 TIGR03375 type_I_sec_LssB type 100.0 8.9E-32 1.9E-36 349.5 38.3 212 837-1076 462-683 (694)
466 PRK14244 phosphate ABC transpo 100.0 7.1E-33 1.5E-37 315.7 24.6 212 167-415 18-236 (251)
467 TIGR01277 thiQ thiamine ABC tr 100.0 4.9E-33 1.1E-37 309.0 22.7 199 169-410 13-212 (213)
468 COG1132 MdlB ABC-type multidru 100.0 8.2E-34 1.8E-38 360.5 18.6 212 836-1076 326-547 (567)
469 PRK14272 phosphate ABC transpo 100.0 9.9E-33 2.1E-37 314.9 25.6 208 167-415 17-235 (252)
470 PRK13539 cytochrome c biogenes 100.0 2.2E-33 4.9E-38 310.1 19.6 197 839-1065 3-199 (207)
471 CHL00131 ycf16 sulfate ABC tra 100.0 7.7E-33 1.7E-37 315.8 24.6 220 838-1076 7-236 (252)
472 COG4181 Predicted ABC-type tra 100.0 3.9E-33 8.4E-38 278.7 19.2 202 162-407 18-226 (228)
473 PRK14253 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 315.1 24.3 211 167-415 16-232 (249)
474 PRK14271 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 317.5 25.8 211 167-415 34-250 (276)
475 PRK14251 phosphate ABC transpo 100.0 9.1E-33 2E-37 314.9 24.8 210 168-415 18-234 (251)
476 PRK10982 galactose/methyl gala 100.0 2.3E-33 4.9E-38 350.1 21.6 205 864-1077 11-219 (491)
477 PRK14249 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 313.9 25.6 210 168-415 18-234 (251)
478 PRK13547 hmuV hemin importer A 100.0 9E-33 1.9E-37 316.9 24.7 213 167-415 14-243 (272)
479 PRK14243 phosphate transporter 100.0 5.2E-33 1.1E-37 318.7 22.7 218 838-1076 10-243 (264)
480 cd03245 ABCC_bacteriocin_expor 100.0 2.2E-33 4.7E-38 313.7 19.0 209 839-1074 3-220 (220)
481 PRK14236 phosphate transporter 100.0 1.1E-32 2.4E-37 317.4 25.3 210 168-415 39-255 (272)
482 PRK10418 nikD nickel transport 100.0 6.1E-33 1.3E-37 316.6 22.8 203 168-415 17-229 (254)
483 cd03251 ABCC_MsbA MsbA is an e 100.0 1.2E-33 2.6E-38 318.9 16.7 195 865-1076 16-220 (234)
484 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.6E-33 7.8E-38 319.5 20.8 210 838-1076 2-220 (275)
485 PRK11174 cysteine/glutathione 100.0 1.5E-33 3.3E-38 359.9 19.8 210 837-1076 348-567 (588)
486 PRK14261 phosphate ABC transpo 100.0 1.2E-32 2.7E-37 314.1 25.1 210 168-415 20-236 (253)
487 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-33 3.1E-38 319.0 17.0 196 864-1076 16-221 (238)
488 PRK14246 phosphate ABC transpo 100.0 8E-33 1.7E-37 315.5 23.2 217 838-1076 10-236 (257)
489 cd03252 ABCC_Hemolysin The ABC 100.0 6.1E-33 1.3E-37 313.7 21.9 206 167-416 15-225 (237)
490 COG4604 CeuD ABC-type enteroch 100.0 6.8E-34 1.5E-38 290.7 12.6 211 165-416 12-225 (252)
491 cd03297 ABC_ModC_molybdenum_tr 100.0 7.8E-33 1.7E-37 307.7 22.3 192 172-409 16-214 (214)
492 cd03229 ABC_Class3 This class 100.0 2.4E-33 5.2E-38 302.3 17.6 159 864-1067 13-177 (178)
493 PRK14266 phosphate ABC transpo 100.0 8.7E-33 1.9E-37 314.9 23.1 219 838-1076 3-229 (250)
494 PRK13546 teichoic acids export 100.0 1.3E-32 2.9E-37 313.8 24.6 193 862-1076 35-227 (264)
495 PRK09580 sufC cysteine desulfu 100.0 1E-32 2.2E-37 314.1 23.4 219 839-1076 2-230 (248)
496 COG4987 CydC ABC-type transpor 100.0 1.7E-33 3.6E-38 327.9 16.9 211 838-1076 336-556 (573)
497 TIGR01189 ccmA heme ABC export 100.0 4.6E-33 9.9E-38 305.7 19.6 183 864-1063 13-197 (198)
498 PRK14275 phosphate ABC transpo 100.0 4.2E-33 9E-38 322.7 20.3 203 168-415 53-269 (286)
499 TIGR02868 CydC thiol reductant 100.0 2.6E-33 5.7E-38 353.3 20.2 177 168-386 349-528 (529)
500 PRK14260 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 314.3 24.5 210 168-415 21-242 (259)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.3e-251 Score=2311.85 Aligned_cols=1339 Identities=53% Similarity=0.918 Sum_probs=1254.7
Q ss_pred CchhhhhHHHHhhCCchhhhhhccccccCCCcceeccCCCChhhhHHHHHHHHHhcccchHHHHHHHHHHHHhcCCCCCc
Q 046196 39 DDDEALTWAAIEKLPTYLRVQRGMLTEDEGQAREVDIKNLGFIERRNLIERLLKIAEEDNEKFLLKLKDRIERVGLDIPT 118 (1436)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1436)
||||+|+|||+|||||++| +++.+... .++|+.++++.+++.++++..+..++|+++++.++++|.+++ +.|.
T Consensus 13 ~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p~ 85 (1391)
T KOG0065|consen 13 EDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELPT 85 (1391)
T ss_pred hhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCCc
Confidence 4999999999999999999 55543211 179999999999999999999999999999999999999998 8899
Q ss_pred eeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHH
Q 046196 119 IEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLL 198 (1436)
Q Consensus 119 ~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 198 (1436)
++++++++.+++++..| ||+.|...+..+..+...+.. +++..+||+|+|+.++|||+++++|||||||||||+
T Consensus 86 ~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllk 159 (1391)
T KOG0065|consen 86 IEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLK 159 (1391)
T ss_pred eEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHHH
Confidence 99999999999998765 999999999888877766654 455578999999999999999999999999999999
Q ss_pred HHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCC
Q 046196 199 ALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIK 278 (1436)
Q Consensus 199 ~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (1436)
+|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|++.|||||+|+|+++|++++.|++ +..|+++..
T Consensus 160 al~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~--- 233 (1391)
T KOG0065|consen 160 ALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA--- 233 (1391)
T ss_pred HHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH---
Confidence 99999998877889999999999999999999999999999999999999999999999999887 666766542
Q ss_pred CCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCCh
Q 046196 279 PDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDS 358 (1436)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~ 358 (1436)
.++|++++++||++|+||+|||++.||+||||||||+||+++++++++++|||+|+|||+
T Consensus 234 --------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLDS 293 (1391)
T KOG0065|consen 234 --------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLDS 293 (1391)
T ss_pred --------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccccH
Confidence 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 046196 359 STTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEV 438 (1436)
Q Consensus 359 ~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 438 (1436)
+|+.+++++|+++++..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++++
T Consensus 294 sTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~v 373 (1391)
T KOG0065|consen 294 STAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTEV 373 (1391)
T ss_pred HHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHH
Q 046196 439 TSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLM 518 (1436)
Q Consensus 439 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~ 518 (1436)
++++++.++|..+..++.+.++.||.+.|.+++.++++..+++.++++.+.++.++..++|..+.|+|++.|+.|+++++
T Consensus 374 ts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l~ 453 (1391)
T KOG0065|consen 374 TSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLLM 453 (1391)
T ss_pred hcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccc
Q 046196 519 KRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFP 598 (1436)
Q Consensus 519 ~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~ 598 (1436)
+||.+++.+++++.+++|+++|++|+++.+ ++..++..+.|++||++++.+|++++|+.++++++|||+|||+..|||
T Consensus 454 k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY~ 531 (1391)
T KOG0065|consen 454 KRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFYP 531 (1391)
T ss_pred hCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccccC
Confidence 999999999999999999999999999985 556677889999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q 046196 599 AWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANL 678 (1436)
Q Consensus 599 ~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l 678 (1436)
+||+.++.+++++|.+++++++|.+|+||++|+.+++++||++++++++++++++++||+++++++++..|++++++..+
T Consensus 532 p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~L 611 (1391)
T KOG0065|consen 532 PWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILLL 611 (1391)
T ss_pred hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCccccCCCCC---------------CCchhHHHHhhcC
Q 046196 679 TVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKSWGHVPPNS---------------TEPLGVVILKSRG 743 (1436)
Q Consensus 679 ~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~---------------~~~~g~~~l~~~g 743 (1436)
++.+++||+|+..+||+||+|++|++|++|+++++++|||++++|.|.|.++ ....|..+++.++
T Consensus 612 ~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~~ 691 (1391)
T KOG0065|consen 612 VLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGRD 691 (1391)
T ss_pred HHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEeccc
Confidence 9999999999999999999999999999999999999999999999984321 3567899999999
Q ss_pred CC-----CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCCccccccccccccccccc
Q 046196 744 LF-----PNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEEPVELSSGVQSSYGEVRS 818 (1436)
Q Consensus 744 ~~-----~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1436)
+. ...+|+|+++|+++||+++|++++.+++.|+++....+.++..+...++..... .+.. .+.+.
T Consensus 692 ~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-------~~~~---~~~~~ 761 (1391)
T KOG0065|consen 692 YLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-------AGSS---SEIEK 761 (1391)
T ss_pred ccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh-------cccc---ccccc
Confidence 88 778899999999999999999999999999999888877765433222111100 0000 00000
Q ss_pred ccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHc
Q 046196 819 FNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 898 (1436)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~ 898 (1436)
..+.....++++..|+.+..++++||.|.+++|.+++.++ +++++|+|||+.++||.++||||+||||||||||+|+
T Consensus 762 ~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA 838 (1391)
T KOG0065|consen 762 LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLA 838 (1391)
T ss_pred cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHh
Confidence 0111111355778888899999999999999998887665 6788999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 046196 899 GRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI 978 (1436)
Q Consensus 899 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~ 978 (1436)
||++.|.++|+|+|||+|.++..++|.+|||+|+|.|.|.+||+|.|.|+|+||+|.+++.+++.++||+|++.+||.++
T Consensus 839 ~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~ 918 (1391)
T KOG0065|consen 839 GRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY 918 (1391)
T ss_pred cCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh
Q 046196 979 REALVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDA 1057 (1436)
Q Consensus 979 ~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p-~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 1057 (1436)
+|.+||.|| +|||.+|||||+||++|++|| .||||||||||||++++..|++.+|+++++|+|||||+||||.++++.
T Consensus 919 ~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~ 997 (1391)
T KOG0065|consen 919 ADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEA 997 (1391)
T ss_pred hhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHH
Confidence 999999998 999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred hCeEEEEecCcEEEEEcCCCcchhHHHHHhhhCCCCCCCCCCCCcccceeeccCchhhhhhhhcHHHHHhhcHhhHhHHH
Q 046196 1058 FDELLLMKRGGEEIYVGPLGRHCSQLIKYFEGIDGVPKIKEGYNPATWMLEVTTPAQEAALGINFAKVYKNSELYKGNKE 1137 (1436)
Q Consensus 1058 ~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 1137 (1436)
||++++|++||++||+||+|++++++++||++++|++ |++..|||||||||++.+.+.+.+.||+++|++|++|+++++
T Consensus 998 FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e 1076 (1391)
T KOG0065|consen 998 FDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKE 1076 (1391)
T ss_pred HhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHH
Confidence 9999999999999999999999999999999999886 555559999999999998888888999999999999999999
Q ss_pred HHHhhCCCCCC-CCCCcccccccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHH
Q 046196 1138 MIKELSIPPPG-SKNLYFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLF 1216 (1436)
Q Consensus 1138 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1216 (1436)
++++++.|+++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||++|+ ++|+++
T Consensus 1077 ~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lq 1153 (1391)
T KOG0065|consen 1077 LVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQ 1153 (1391)
T ss_pred HHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHH
Confidence 99999999998 77888899999999999999999999999999999999999999999999999999995 689999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchH
Q 046196 1217 NAMGSMYAAILFLGVQNATSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVS 1296 (1436)
Q Consensus 1217 ~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~ 1296 (1436)
|.+|++|+++++.+..++..++|.+..||.++|||+++||||+.+|++||+++|+||+++++++|.+|+|+|+||++++.
T Consensus 1154 n~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~ 1233 (1391)
T KOG0065|consen 1154 NAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTAS 1233 (1391)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHH
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHH
Q 046196 1297 KFLWYLLFMYLTFLYFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVAS 1376 (1436)
Q Consensus 1297 ~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~ 1376 (1436)
+|+||+++++++.+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+||||+||++|.++|++..
T Consensus 1234 ~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~ 1313 (1391)
T KOG0065|consen 1234 KFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISS 1313 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCcccccC----------CCCCHHHHHHhhcC----CcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 046196 1377 QFGDVNDTFD----------SGQKVGDFVKDYFG----YDHDMLGVVAVVHVGLVVLFGFTFAYSIKAFNFQHR 1436 (1436)
Q Consensus 1377 ~~~~~~~~~~----------~~~~~~~~~~~~~g----~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~~~~~r 1436 (1436)
+++|.+..|. +|.||++|++++|| |.++.......+..+|.+.+.+++.+++|+.|||||
T Consensus 1314 ~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1314 QLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 9999998884 34699999999999 999999998899999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.2e-233 Score=2318.31 Aligned_cols=1418 Identities=61% Similarity=1.074 Sum_probs=1272.4
Q ss_pred CCcccccCcccccccc--C-C--CCCCCchhhhhHHHHhhCCchhhhhhcccccc-----CCC---cceeccCCCChhhh
Q 046196 17 SSSIWRNNTLDVFARS--S-R--EDTYDDDEALTWAAIEKLPTYLRVQRGMLTED-----EGQ---AREVDIKNLGFIER 83 (1436)
Q Consensus 17 ~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~ 83 (1436)
+.+.|. .+++|++. + + .+.|||||+|+|||+||||||+|+|++++.+. .|+ .+|+|+++|+.+|+
T Consensus 17 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (1470)
T PLN03140 17 SRSSRN--MEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDR 94 (1470)
T ss_pred hhhhhh--hhhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHH
Confidence 344463 36888552 2 2 13458999999999999999999999999652 122 23699999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHhcCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCC
Q 046196 84 RNLIERLLKIAEEDNEKFLLKLKDRIERVGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSR 163 (1436)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1436)
+.+++|++++.++|++++++++++|.+++|+++|++||+|+||++++++.++++.+||++|...+.++.+....+...++
T Consensus 95 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k 174 (1470)
T PLN03140 95 QKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAK 174 (1470)
T ss_pred HHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777655544444
Q ss_pred CCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCC
Q 046196 164 KKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 164 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~l 243 (1436)
+.+++||+|||+.++|||+++|+|||||||||||++|+|+++|+.+++|+|.+||+++++..+++.++||+|+|.|++++
T Consensus 175 ~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~l 254 (1470)
T PLN03140 175 KTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVM 254 (1470)
T ss_pred CccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcC
Confidence 45678999999999999999999999999999999999999887778999999999988776678899999999999999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+|||.|+++|++.+.++++..+..+++++.++.|+.+.++++++...++.+.+..++++|+.+||++|+||.||++++
T Consensus 255 TV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~ 334 (1470)
T PLN03140 255 TVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMI 334 (1470)
T ss_pred cHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccc
Confidence 99999999999988777766666777888888888888888999999888888888899999999999999999999999
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|
T Consensus 335 rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G 414 (1470)
T PLN03140 335 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEG 414 (1470)
T ss_pred cCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCc
Confidence 99999999999999999999999999999999999999999999999987667788888899999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 046196 404 QIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATP 483 (1436)
Q Consensus 404 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1436)
+++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++|++.|++++.++++.++++.+
T Consensus 415 ~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 494 (1470)
T PLN03140 415 QIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVP 494 (1470)
T ss_pred eEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999988888877777888889999999999999988888887777
Q ss_pred CCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHHH
Q 046196 484 FDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGAL 563 (1436)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~l 563 (1436)
.++++.++.....++|..++++|++.|++|++++++||+..++.++++.+++|+++|++|++++++.....++..+.|++
T Consensus 495 ~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~l 574 (1470)
T PLN03140 495 FDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGAL 574 (1470)
T ss_pred hhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHH
Confidence 66665566666667899999999999999999999999999999999999999999999999987765556677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHHH
Q 046196 564 FFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQYF 643 (1436)
Q Consensus 564 ff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 643 (1436)
||++++.++++++++..++.++|||+|||+..||++|+|+++++++++|+.++++++|++|+|||+|+.+++++||.+++
T Consensus 575 ff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l 654 (1470)
T PLN03140 575 LFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLL 654 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCcc
Q 046196 644 LLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKSW 723 (1436)
Q Consensus 644 ~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~ 723 (1436)
+++++++++++++++++++++++.+|++++++..+++++|+||++++++||+||+|++|+||+.|+++++++|||.+.+|
T Consensus 655 ~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~ 734 (1470)
T PLN03140 655 LVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRW 734 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccC-CCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCC-
Q 046196 724 GHV-PPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEE- 801 (1436)
Q Consensus 724 ~~~-~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 801 (1436)
.+. +.+...+.|..+|+.+|+..++.|+|+++|++++|+++|++++++++++.++......++..+............
T Consensus 735 ~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1470)
T PLN03140 735 MNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIP 814 (1470)
T ss_pred cCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccc
Confidence 643 223345789999999999998999999999999999999999999999998765555443221111000000000
Q ss_pred ---cccc--c---ccc--cccccc----cccc-c-ccccccccCcccCCCCceeEEecccceeecchhhhccCCCCcccc
Q 046196 802 ---PVEL--S---SGV--QSSYGE----VRSF-N-EADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLE 865 (1436)
Q Consensus 802 ---~~~~--~---~~~--~~~~~~----~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (1436)
..+. . ... +..... .... . ......++++.+|+.|..++|+|++|.++.+.+.++.+...+++.
T Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~ 894 (1470)
T PLN03140 815 RSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQ 894 (1470)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCce
Confidence 0000 0 000 000000 0000 0 001122345667888899999999999998877666555556678
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHHHH
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYESL 945 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l 945 (1436)
+|+|||++++||+++|||||||||||||||+|+|+.++++.+|+|.+||.+.+...+++.+|||+|+|.+++.+||+|+|
T Consensus 895 iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L 974 (1470)
T PLN03140 895 LLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESL 974 (1470)
T ss_pred EeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHH
Confidence 99999999999999999999999999999999999876678999999999876555667899999999999999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHH
Q 046196 946 VYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1025 (1436)
Q Consensus 946 ~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~ 1025 (1436)
.|++.++.|...+.+++.++++++++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||||||+.+
T Consensus 975 ~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~ 1054 (1470)
T PLN03140 975 IYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1054 (1470)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Confidence 99998887766666677788999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHhhhCCCCCCCCCCCCcccc
Q 046196 1026 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLIKYFEGIDGVPKIKEGYNPATW 1105 (1436)
Q Consensus 1026 ~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~ 1105 (1436)
+..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+|+||+++|||||
T Consensus 1055 a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~ 1134 (1470)
T PLN03140 1055 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATW 1134 (1470)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhh
Confidence 99999999999988999999999999778999999999998899999999998889999999999888889999999999
Q ss_pred eeeccCchhhhhhhhcHHHHHhhcHhhHhHHHHHHhhCCCCCCCCCCcccccccCcHHHHHHHHHHHHHHHhhcChhHHH
Q 046196 1106 MLEVTTPAQEAALGINFAKVYKNSELYKGNKEMIKELSIPPPGSKNLYFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTA 1185 (1436)
Q Consensus 1106 ~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~ 1185 (1436)
|||+++.+.+...+.||++.|++|++++++++.+++++.++++.++..++++|++|+|+|+++|+||+++++||||.|+.
T Consensus 1135 ~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~ 1214 (1470)
T PLN03140 1135 MLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNL 1214 (1470)
T ss_pred hhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHH
Confidence 99999876665566799999999999999888888887776666666667889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHH
Q 046196 1186 VRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAILFLGVQNATSVQPVVAVERTVFYRERAAGMYSALPYAFG 1265 (1436)
Q Consensus 1186 ~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a 1265 (1436)
+|+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++.+|++|
T Consensus 1215 ~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la 1294 (1470)
T PLN03140 1215 VRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIA 1294 (1470)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 99999999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcc
Q 046196 1266 QVVIELPHIFIQAVIYGVIVYAMIGFDWTVSKFLWYLLFMYLTFLYFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSG 1345 (1436)
Q Consensus 1266 ~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G 1345 (1436)
++++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+.+++++++++++|||
T Consensus 1295 ~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~G 1374 (1470)
T PLN03140 1295 QVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSG 1374 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCcccccCC-----CCCHHHHHHhhcCCcccchhHHHHHHHHHHHHH
Q 046196 1346 FIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVNDTFDS-----GQKVGDFVKDYFGYDHDMLGVVAVVHVGLVVLF 1420 (1436)
Q Consensus 1346 ~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~f 1420 (1436)
|++|+++||+||+|+||+||++|+++|+++|||+|.+..|++ ++++++|++++|||+++++|++++++++|+++|
T Consensus 1375 f~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f 1454 (1470)
T PLN03140 1375 FFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFF 1454 (1470)
T ss_pred eccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHH
Confidence 999999999999999999999999999999999998876542 357899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCC
Q 046196 1421 GFTFAYSIKAFNFQHR 1436 (1436)
Q Consensus 1421 ~~~~~~~l~~~~~~~r 1436 (1436)
++++++++|++|||||
T Consensus 1455 ~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1455 AFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHHHhhcccC
Confidence 9999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.7e-182 Score=1834.50 Aligned_cols=1284 Identities=30% Similarity=0.522 Sum_probs=1052.0
Q ss_pred cchHHHHHHHHHHHHhcCCCCC--ceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecc
Q 046196 96 EDNEKFLLKLKDRIERVGLDIP--TIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDV 173 (1436)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 173 (1436)
.|++++++.+.++.++.+...| +++|+|+||++++ ...+....||+.|...+.......... ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566666554444445554444 9999999999999 444566789999988776553332221 12334557799999
Q ss_pred eEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCCHHHHHH
Q 046196 174 SGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD-LKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMTVRETLA 250 (1436)
Q Consensus 174 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1436)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++.+.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997421 124999999999875432 2346999999999999999999999
Q ss_pred hhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 046196 251 FSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQ 330 (1436)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 330 (1436)
|+++++....+.+ ...+.+ ..+..++.+|+.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9987654211100 000100 01123466899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecC
Q 046196 331 RKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGP 410 (1436)
Q Consensus 331 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 410 (1436)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++||++++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999875567888888888899999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCCCCC---
Q 046196 411 RENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATPFDKS--- 487 (1436)
Q Consensus 411 ~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 487 (1436)
++++.+||+++||+||++.+++||+.+++++.++ +++.... .....+.+++++.|++++.++++.++...+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYE-KKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccccc-ccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987642 2322111 1123578899999999887766655543221110
Q ss_pred ------------CCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccc
Q 046196 488 ------------KSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVED 555 (1436)
Q Consensus 488 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~ 555 (1436)
...+.....+.|..++++|++.|++|+++.++||+..++.++++.+++|+++|++|++.+.+.. .
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0001122334688899999999999999999999999999999999999999999999875432 3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccH
Q 046196 556 GGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNI 635 (1436)
Q Consensus 556 ~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 635 (1436)
.....|++||++++.++.++.++...+.++|+|+|||...+|++++|++++.+.++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 45678999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHH
Q 046196 636 ERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAV 715 (1436)
Q Consensus 636 ~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~ 715 (1436)
++||.+++++++...+++++++++++++++..+|+.++++..+++++++||+++.++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCccccC---CCC---------------------CCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 046196 716 NEFLGKSWGHV---PPN---------------------STEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTV 771 (1436)
Q Consensus 716 nef~~~~~~~~---~~~---------------------~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~ 771 (1436)
|||.+..+.|. +.+ .....|..+|+. ++.....|+|.++|++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999998874 211 113468888884 33334568999999999999999999999
Q ss_pred HHHhcCCCCCccccchHHHHhh---hhccCCCCcccccccccccccccccccccccccccCcccC--CCCceeEEecccc
Q 046196 772 ALKYLDPFGKPQAILSEEALAK---KNACKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILP--FEPHSITFDDIRY 846 (1436)
Q Consensus 772 ~l~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~ 846 (1436)
++++.++.......+....... .......+....+......+...+...+.+ ........| .....++|+|++|
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~nl~~ 767 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESD-DVNDEKDMEKESGEDIFHWRNLTY 767 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccc-cccccccccccCCCceEEEEeeEE
Confidence 9999885543322211111000 000000000000000000000000000000 000000001 1123478999998
Q ss_pred eeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCccCCcccccce
Q 046196 847 ALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYPKNQETFARI 925 (1436)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~ 925 (1436)
.++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++... .+++.
T Consensus 768 ~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~ 837 (1394)
T TIGR00956 768 EVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRS 837 (1394)
T ss_pred EecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcc
Confidence 87421 13457999999999999999999999999999999999998644 467999999998753 46778
Q ss_pred EEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 046196 926 SGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVEL 1005 (1436)
Q Consensus 926 ~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL 1005 (1436)
+|||+|+|.+++.+||+|+|.|++.++.|...+.+++.++++++++.++|.++.|+.+|.++ .+|||||||||+||+||
T Consensus 838 i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 838 IGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKRLTIGVEL 916 (1394)
T ss_pred eeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhHHHHHHHH
Confidence 99999999999999999999999998877666666777889999999999999999998654 48999999999999999
Q ss_pred hhCCC-cceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHH
Q 046196 1006 VANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLI 1084 (1436)
Q Consensus 1006 ~~~p~-illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~ 1084 (1436)
+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+||.++++++++
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~ 996 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTII 996 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHH
Confidence 99997 99999999999999999999999999888999999999999777889999999999889999999998889999
Q ss_pred HHhhhCCCCCCCCCCCCcccceeeccCchhhhhhhhcHHHHHhhcHhhHhHHHHHHhhCCCCCCCC---CCcccccccCc
Q 046196 1085 KYFEGIDGVPKIKEGYNPATWMLEVTTPAQEAALGINFAKVYKNSELYKGNKEMIKELSIPPPGSK---NLYFQTRYSQS 1161 (1436)
Q Consensus 1085 ~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s 1161 (1436)
+||+++ |.++||+++|||||+||+++...+.....+|.+.|++|+++++..+.++++..+..... +.....+|+.|
T Consensus 997 ~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 1075 (1394)
T TIGR00956 997 NYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAAS 1075 (1394)
T ss_pred HHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCC
Confidence 999986 55679999999999999988654443446899999999988877666555443321111 11122468999
Q ss_pred HHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 046196 1162 FFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAILFLGVQNATSVQPVV 1241 (1436)
Q Consensus 1162 ~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~ 1241 (1436)
|++|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .+++|.|
T Consensus 1076 ~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~~~~~f 1151 (1394)
T TIGR00956 1076 LWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQYLPPF 1151 (1394)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HHhhhhH
Confidence 9999999999999999999999999999999999999999999987 47889999999999988887764 4566888
Q ss_pred HHhhHHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHH-------HHHHHHHHHHHHHHHH
Q 046196 1242 AVERTVF-YRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSK-------FLWYLLFMYLTFLYFT 1313 (1436)
Q Consensus 1242 ~~er~v~-~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~-------f~~~~~~~~~~~~~~~ 1313 (1436)
..||.+| +||+++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+ |++|+++++++.++++
T Consensus 1152 ~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 1231 (1394)
T TIGR00956 1152 VAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFS 1231 (1394)
T ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHH
Confidence 8888885 8999999999999999999999999999999999999999999988876 9999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCcccccCC------
Q 046196 1314 LYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVNDTFDS------ 1387 (1436)
Q Consensus 1314 ~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~~~~------ 1387 (1436)
++|+++++++|+..+|+.+++++++++++||||++|+++||.||+|++|+||++|+++|++.|||+|.+..|.+
T Consensus 1232 s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f 1311 (1394)
T TIGR00956 1232 TLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTF 1311 (1394)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCcccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877742
Q ss_pred ----CCCHHHHH-------------------------------HhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 046196 1388 ----GQKVGDFV-------------------------------KDYFGYDHDMLGVVAVVHVGLVVLFGFTFAYSIKAF 1431 (1436)
Q Consensus 1388 ----~~~~~~~~-------------------------------~~~~g~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~ 1431 (1436)
|.||++|+ ...+|++.++.|++++++++|++++ ++.++++.+.
T Consensus 1312 ~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1312 NPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred cCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 33444332 2366899999999999999999988 6777777765
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.7e-93 Score=901.88 Aligned_cols=581 Identities=25% Similarity=0.420 Sum_probs=485.8
Q ss_pred CCceeEEecccceeecch----------------hhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHc
Q 046196 835 EPHSITFDDIRYALDMPQ----------------EMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 898 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~ 898 (1436)
.+..+.|.|++|.+.... ..++.....+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 356899999999886542 0111222344577999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 046196 899 GRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI 978 (1436)
Q Consensus 899 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~ 978 (1436)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.+++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9976544689999999987533 345689999999999999999999999888766555556667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Q 046196 979 REALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAF 1058 (1436)
Q Consensus 979 ~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1058 (1436)
.|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred CeEEEEecCcEEEEEcCCCcchhHHHHHhhhCCCCCCCCCCCCcccceeeccCchhhh---------hhhhcHHHHHhhc
Q 046196 1059 DELLLMKRGGEEIYVGPLGRHCSQLIKYFEGIDGVPKIKEGYNPATWMLEVTTPAQEA---------ALGINFAKVYKNS 1129 (1436)
Q Consensus 1059 D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~---------~~~~~~~~~~~~s 1129 (1436)
|++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+. .....+.+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 68999999985 3 5999999999999998753210 0011233445322
Q ss_pred HhhHhHHHHHHhh--CC-CCC-----CCCCC-cccccccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 046196 1130 ELYKGNKEMIKEL--SI-PPP-----GSKNL-YFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGT 1200 (1436)
Q Consensus 1130 ~~~~~~~~~~~~~--~~-~~~-----~~~~~-~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1200 (1436)
. .+...+..+.. .. +.. ..+.. ...+.+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 00000 011235578999999999999988 99999999999999999999999
Q ss_pred HhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 046196 1201 IFWDIGSKRANRQDLFNAMGSMYAAILFLGVQNATSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVI 1280 (1436)
Q Consensus 1201 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~ 1280 (1436)
+||+++ ..+++++.|++||++++.++.+++.+++.|+.||+||+||+++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999985 467899999999999998888888888999999999999999999999999999999999999999999
Q ss_pred hhhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 046196 1281 YGVIVYAMIGFDWTVSKFLWYLLFMYLTFLYFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWY 1360 (1436)
Q Consensus 1281 ~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~ 1360 (1436)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhcHHHHHHHHHHHHhhCCccc-----ccCCC----CCHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 046196 1361 CWICPVSWTLYGLVASQFGDVND-----TFDSG----QKVGDFVKDYFGYDHDMLGVVAVVHVGLVVLFGFTFAYSIKAF 1431 (1436)
Q Consensus 1361 ~~~sp~~y~~~~l~~~~~~~~~~-----~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~ 1431 (1436)
+|+||++|+++|++.|||++... .|+.. .....++. ..++++...|.++++|++|+++|++++++++++.
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 45321 11112222 2344455789999999999999999999999988
Q ss_pred cc
Q 046196 1432 NF 1433 (1436)
Q Consensus 1432 ~~ 1433 (1436)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.4e-93 Score=904.51 Aligned_cols=564 Identities=30% Similarity=0.513 Sum_probs=499.5
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCccCCcccccceEEEeecCCCCCCCCcH
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+++...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 567999999999999999999999999999999999987643 3589999999988766677889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1020 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~-~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsg 1020 (1436)
+||+.|++.++.|...+.+++++.++++++.+||.+++|+.+|.++ .++||||||||++||+||+.+|++++|||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999888777777788889999999999999999999754 678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHhhhCCCCCCCCCCC
Q 046196 1021 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLIKYFEGIDGVPKIKEGY 1100 (1436)
Q Consensus 1021 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~ 1100 (1436)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+||. +++.+||++++ . +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g-~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG-H-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC-C-CCCCCC
Confidence 9999999999999999888999999999998889999999999985 799999997 67999999985 3 699999
Q ss_pred CcccceeeccCchhhh-----hhhhcHHHHHhhcHhhHhHHHHHHhhCCCCC---CCCCCcccccccCcHHHHHHHHHHH
Q 046196 1101 NPATWMLEVTTPAQEA-----ALGINFAKVYKNSELYKGNKEMIKELSIPPP---GSKNLYFQTRYSQSFFTQCMACLWK 1172 (1436)
Q Consensus 1101 npad~~l~v~~~~~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~Q~~~l~~R 1172 (1436)
|||||++|+++...+. ....++.+.|++|+.+++..+.......+.+ ........+++..+|+.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 9999999998743321 1123566777777766554443332111111 1111112346788999999999999
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhHHHHHHh
Q 046196 1173 QHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAILFLGVQNATSVQPVVAVERTVFYRER 1252 (1436)
Q Consensus 1173 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1252 (1436)
+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467899999999999999998888788899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 046196 1253 AAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSKFLWYLLFMYLTFLYFTLYGMMTVAVTPNHNIAAII 1332 (1436)
Q Consensus 1253 ~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1332 (1436)
.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCccc-ccCCC------CCHHHHHHhhcCCcccc
Q 046196 1333 ASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVND-TFDSG------QKVGDFVKDYFGYDHDM 1405 (1436)
Q Consensus 1333 ~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~-~~~~~------~~~~~~~~~~~g~~~~~ 1405 (1436)
+++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++... +|..+ +..++++.+.||++.++
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~ 586 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNAD 586 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCccc
Confidence 999999999999999999999999999999999999999999999998775 55421 11257777899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 046196 1406 LGVVAVVHVGLVVLFGFTFAYSIKAFNFQHR 1436 (1436)
Q Consensus 1406 ~~~~~~~l~~~~~~f~~~~~~~l~~~~~~~r 1436 (1436)
.|.++++|++|.++|+++++++|++-...+|
T Consensus 587 ~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 587 LYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999998666555
No 6
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-93 Score=892.42 Aligned_cols=578 Identities=31% Similarity=0.575 Sum_probs=501.9
Q ss_pred CceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECC
Q 046196 836 PHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISG 914 (1436)
Q Consensus 836 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g 914 (1436)
+..+.|+|+++..+.+.. ..+++|+|||+.++|||++||||||||||||||++|+|+..++ ..+|+|++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 457899999987754321 3478999999999999999999999999999999999998764 6899999999
Q ss_pred ccCCcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 915 YPKNQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 915 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
++.+.+.+++.+|||+|+|.++|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|+++.+|+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88888889999999999999999999999999999999999888999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|||||+||.+|+.||+||||||||||||+.++..++++|++++++|+|||||+|||+.+++++||++++|++ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred CCCcchhHHHHHhhhCCCCCCCCCCCCcccceeeccCch-hhhhhhhcHHHHHhhcHhhH--h-HHHHHHhhCCCCCCCC
Q 046196 1075 PLGRHCSQLIKYFEGIDGVPKIKEGYNPATWMLEVTTPA-QEAALGINFAKVYKNSELYK--G-NKEMIKELSIPPPGSK 1150 (1436)
Q Consensus 1075 ~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~-~~~~~~~~~~~~~~~s~~~~--~-~~~~~~~~~~~~~~~~ 1150 (1436)
|. +++.+||+++| . +||+++|||||++|+.+.. ..... .+..+.++....++ . ..+............+
T Consensus 254 ~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (613)
T KOG0061|consen 254 SP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTSK 326 (613)
T ss_pred CH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhccccc
Confidence 97 68999999985 4 4999999999999998742 11000 11111111111100 0 0000000111100111
Q ss_pred CCcccccccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHH
Q 046196 1151 NLYFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAILFLG 1230 (1436)
Q Consensus 1151 ~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~ 1230 (1436)
. .+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.+.++.
T Consensus 327 ~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~~~~~ 401 (613)
T KOG0061|consen 327 K--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFILSFMT 401 (613)
T ss_pred c--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHHHHHH
Confidence 1 1111278999999999999999999999999999999999999999999999764 5566799999999999998
Q ss_pred HHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHHHHHHHHHHHHHHH
Q 046196 1231 VQNATSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSKFLWYLLFMYLTFL 1310 (1436)
Q Consensus 1231 ~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~ 1310 (1436)
+..+...++.|+.||.+|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|++++++..+
T Consensus 402 f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~ 481 (613)
T KOG0061|consen 402 FLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSL 481 (613)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCcccccC----
Q 046196 1311 YFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVNDTFD---- 1386 (1436)
Q Consensus 1311 ~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~~~---- 1386 (1436)
.++++|++++++.||...|..++++++..+++|+||+++.++||+||+|++|+|+++|+++|++.|||++....|.
T Consensus 482 ~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~ 561 (613)
T KOG0061|consen 482 VAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN 561 (613)
T ss_pred HHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997333332
Q ss_pred --CCCCHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 046196 1387 --SGQKVGDFVKDYFGYDHDMLGVVAVVHVGLVVLFGFTFAYSIKAFNFQH 1435 (1436)
Q Consensus 1387 --~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~~~~~ 1435 (1436)
+..++.+++ ..++++.++.|.++.++++|.++|++++++++++--..+
T Consensus 562 ~~~~~~~~~~l-~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 562 LCCESTGEDVL-KQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred CcccccHHHHH-HhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 122445555 578999999999999999999999999999998754443
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.7e-90 Score=937.35 Aligned_cols=561 Identities=26% Similarity=0.441 Sum_probs=494.0
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC--CceeEEEEECCccCCc--ccccceEEEeecCCCCCC
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSP 937 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~ 937 (1436)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998632 2479999999987642 234566999999999999
Q ss_pred CCcHHHHHHHHHHhcCCC----CCCHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 046196 938 HVTVYESLVYSAWLRLPP----EVDSDTRKM-FVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSII 1012 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~----~~~~~~~~~-~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~il 1012 (1436)
.+||+|++.|++.++.|. ..+.+++.+ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998887653 223344333 357789999999999999998888999999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHhhhCC
Q 046196 1013 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLIKYFEGID 1091 (1436)
Q Consensus 1013 llDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~ 1091 (1436)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+||. +++++||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999874 899999999998789999999999996 799999996 68999999985
Q ss_pred CCCCCCCCCCcccceeeccCchhhh----------hhhhcHHHHHhhcHhhHhHHHHHHhhCCCC---------------
Q 046196 1092 GVPKIKEGYNPATWMLEVTTPAQEA----------ALGINFAKVYKNSELYKGNKEMIKELSIPP--------------- 1146 (1436)
Q Consensus 1092 ~~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1146 (1436)
. +||+++|||||++|++++..+. ....+|++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 3 6999999999999998864311 123579999999998877665544321110
Q ss_pred CCCCCCcccccccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHH
Q 046196 1147 PGSKNLYFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAI 1226 (1436)
Q Consensus 1147 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1226 (1436)
..++.....+.|..|+|+|+++|++|+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234688899999999999999999999999999999999999999999999986 4578899999999999
Q ss_pred HHHHHHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHHHHHHHHHHH
Q 046196 1227 LFLGVQNATSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSKFLWYLLFMY 1306 (1436)
Q Consensus 1227 ~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~ 1306 (1436)
++.++.++..+ +.+..||+||+||+.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 55668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCcccccC
Q 046196 1307 LTFLYFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVNDTFD 1386 (1436)
Q Consensus 1307 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~~~ 1386 (1436)
++.++++++++++++++||..+|+.+++++++++++|+||++|+++||+||+|++|+||++|+++|++.|||++....|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887773
Q ss_pred ----C---------------------C---CCHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 046196 1387 ----S---------------------G---QKVGDFVKDYFGYDHDMLGVVAVVHVGLVVLFGFTFAYSIKAFNF 1433 (1436)
Q Consensus 1387 ----~---------------------~---~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~~~ 1433 (1436)
. | .++.+|+...|||+++|+|+++++|++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 0 145689988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.3e-89 Score=920.15 Aligned_cols=563 Identities=25% Similarity=0.392 Sum_probs=484.8
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCccCCcccccceEEEeecCCCCCCCCcH
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
++.+|+|||+.++|||+++|+|||||||||||++|+|+.++. ..+|+|.+||++......++.++|++|+|.|++.+||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 567999999999999999999999999999999999997642 3589999999987544446779999999999999999
Q ss_pred HHHHHHHHHhcCCCC-------CCHHHH------------------------HHHHHHHHHHcCCcccccccccCCCCCC
Q 046196 942 YESLVYSAWLRLPPE-------VDSDTR------------------------KMFVEEVMELVELNPIREALVGLPGVSG 990 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~-------~~~~~~------------------------~~~v~~vl~~l~l~~~~~~~~g~~~~~~ 990 (1436)
+|+|.|++.++.+.. ...+++ +..++++++.+||.+++|+.+|+..+++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 999999988764321 111111 1235789999999999999999988999
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
|||||||||+||++|+.+|+++||||||+|||+.++..+++.|+++++ .|+|||+++|||+.+++++||+|++|++ |+
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ 415 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQ 415 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ce
Confidence 999999999999999999999999999999999999999999999976 4899999999998889999999999996 79
Q ss_pred EEEEcCCCcchhHHHHHhhhCCCCCCCCCCCCcccceeeccCchhh-h-----------hhhhcHHHHHhhcHhhHhHHH
Q 046196 1070 EIYVGPLGRHCSQLIKYFEGIDGVPKIKEGYNPATWMLEVTTPAQE-A-----------ALGINFAKVYKNSELYKGNKE 1137 (1436)
Q Consensus 1070 ~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~ 1137 (1436)
++|+||. +++++||+++| . +||+++|||||++|+++..+. . ....+|++.|++|+.+++..+
T Consensus 416 ivy~G~~----~~~~~yF~~lG-f-~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~ 489 (1470)
T PLN03140 416 IVYQGPR----DHILEFFESCG-F-KCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLEN 489 (1470)
T ss_pred EEEeCCH----HHHHHHHHHcC-C-CCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHH
Confidence 9999996 68999999985 4 699999999999999986432 1 123478999999988776554
Q ss_pred HHHhhCCCCCCCCCCcccccccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHH
Q 046196 1138 MIKELSIPPPGSKNLYFQTRYSQSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFN 1217 (1436)
Q Consensus 1138 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~ 1217 (1436)
.++.........+.....+.|..|++.|++.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+.
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~ 569 (1470)
T PLN03140 490 ELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGAL 569 (1470)
T ss_pred HHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Confidence 43221100000111112345889999999999999999999999999999999999999999999999876545556677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHH
Q 046196 1218 AMGSMYAAILFLGVQNATSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSK 1297 (1436)
Q Consensus 1218 ~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~ 1297 (1436)
+.|++||++++..+.++.. ++.+..||+||+|||.+++|++++|++|++++++|+.++.+++|++|+|||+||++++++
T Consensus 570 ~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~ 648 (1470)
T PLN03140 570 YIGALLFSMIINMFNGFAE-LALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASR 648 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhH
Confidence 8899999998887766555 477889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHh
Q 046196 1298 FLWYLLFMYLTFLYFTLYGMMTVAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQ 1377 (1436)
Q Consensus 1298 f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~ 1377 (1436)
||.|+++++++.++++++++++++++|+..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|+++||
T Consensus 649 Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NE 728 (1470)
T PLN03140 649 FFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNE 728 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcccc---cC-CCCCHHHHHHhhcCCccc--chhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 046196 1378 FGDVNDT---FD-SGQKVGDFVKDYFGYDHD--MLGVVAVVHVGLVVLFGFTFAYSIKAFNF 1433 (1436)
Q Consensus 1378 ~~~~~~~---~~-~~~~~~~~~~~~~g~~~~--~~~~~~~~l~~~~~~f~~~~~~~l~~~~~ 1433 (1436)
|.+.... |. ...+.++.+++.+||..+ +.|+++++|+||+++|.+++++++++++.
T Consensus 729 f~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 729 MFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred ccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9765432 11 123345555578999755 56999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-82 Score=798.01 Aligned_cols=560 Identities=27% Similarity=0.492 Sum_probs=499.7
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCccCCcccccceEEEeecCCCCCCCCc
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYPKNQETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lT 940 (1436)
.+..+|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999976532 236799999998765444788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 046196 941 VYESLVYSAWLRLPPE----VDSDTRK-MFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1015 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~----~~~~~~~-~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlD 1015 (1436)
|+|+|.|+++++.|.. .++.++. +..|.+++.+||.+++|+++|+..+||+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998743 2222222 2578999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHhhhCCCCC
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLIKYFEGIDGVP 1094 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~ 1094 (1436)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. .++++||+++|.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~Gf-- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMGF-- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcCc--
Confidence 999999999999999999999864 889999999999999999999999997 799999998 679999999853
Q ss_pred CCCCCCCcccceeeccCchhhh------------hhhhcHHHHHhhcHhhHhHHHHHHhhCCCCC---CCCCCccccccc
Q 046196 1095 KIKEGYNPATWMLEVTTPAQEA------------ALGINFAKVYKNSELYKGNKEMIKELSIPPP---GSKNLYFQTRYS 1159 (1436)
Q Consensus 1095 ~~~~~~npad~~l~v~~~~~~~------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1159 (1436)
.||+..++|||+.+|++...+. ....+|++.|.+|+.+++.... ++.|.. .++.....++|.
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~---l~~~~~~~k~~~~al~s~~y~ 435 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKE---LSKPYDKSKKHKAALVSSKYS 435 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHH---hcchhhhhhccchhhcCCcee
Confidence 6999999999999999832211 1125799999999998875443 333322 222233446789
Q ss_pred CcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 046196 1160 QSFFTQCMACLWKQHLSYWRNPPYTAVRLFFTTFIALMFGTIFWDIGSKRANRQDLFNAMGSMYAAILFLGVQNATSVQP 1239 (1436)
Q Consensus 1160 ~s~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~ 1239 (1436)
.|+|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..++.+..+ +
T Consensus 436 v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~ 512 (1391)
T KOG0065|consen 436 VPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-A 512 (1391)
T ss_pred ccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-H
Confidence 999999999999999999999999999999999999999999999983 4677889999999999999988887776 5
Q ss_pred hHHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 046196 1240 VVAVERTVFYRERAAGMYSALPYAFGQVVIELPHIFIQAVIYGVIVYAMIGFDWTVSKFLWYLLFMYLTFLYFTLYGMMT 1319 (1436)
Q Consensus 1240 ~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~ 1319 (1436)
...+.|+||+|+|...+|++++|.++.+++++|+.++.+++|.+|+||++||.+++++||.++++++++..++.++.+++
T Consensus 513 ~~~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~i 592 (1391)
T KOG0065|consen 513 LTFQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFI 592 (1391)
T ss_pred HHHhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCcccccC-CCC---------
Q 046196 1320 VAVTPNHNIAAIIASAFYVLWNLFSGFIIPRPRMPIWWRWYCWICPVSWTLYGLVASQFGDVNDTFD-SGQ--------- 1389 (1436)
Q Consensus 1320 ~~~~p~~~~A~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~~~-~~~--------- 1389 (1436)
++++|+...|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|. .||
T Consensus 593 a~l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~ 672 (1391)
T KOG0065|consen 593 ASLSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIEN 672 (1391)
T ss_pred HHhcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988885 111
Q ss_pred ---------------CHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046196 1390 ---------------KVGDFVKDYFGYDHDMLGVVAVVHVGLVVLFGFTFAYSIKAFNFQ 1434 (1436)
Q Consensus 1390 ---------------~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~f~~~~~~~l~~~~~~ 1434 (1436)
.+.+|++..|.+++.|.|++++|++||.++|.+++.+++.|+|+-
T Consensus 673 ~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 673 KVCAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred ccchhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 347788888999999999999999999999999999999999864
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=6.7e-77 Score=755.52 Aligned_cols=568 Identities=28% Similarity=0.435 Sum_probs=475.8
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 244 (1436)
.++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 35679999999999999999999999999999999999988754568999999998765445678999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc-c
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM-L 323 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~-~ 323 (1436)
|+|||.|+++++.... ..+ ++....++.+++.+||++++||.||+++ .
T Consensus 116 V~e~l~f~~~~~~~~~-------~~~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 164 (617)
T TIGR00955 116 VREHLMFQAHLRMPRR-------VTK------------------------KEKRERVDEVLQALGLRKCANTRIGVPGRV 164 (617)
T ss_pred HHHHHHHHHhcCCCCC-------CCH------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCCC
Confidence 9999999987653211 011 1122356789999999999999999864 6
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|++|
T Consensus 165 ~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G 243 (617)
T TIGR00955 165 KGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEG 243 (617)
T ss_pred CCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCC
Confidence 88999999999999999999999999999999999999999999999876 47788888888888999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 046196 404 QIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATP 483 (1436)
Q Consensus 404 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1436)
+++|+|+++++.+||+++|++||++.+++||+.++++.....+. . .....+++.+.|+++...++..+.....
T Consensus 244 ~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 316 (617)
T TIGR00955 244 RVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNLW 316 (617)
T ss_pred eEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhhh
Confidence 99999999999999999999999999999999998875432110 0 0112344555565554444333222111
Q ss_pred CCCC---CCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhh
Q 046196 484 FDKS---KSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYM 560 (1436)
Q Consensus 484 ~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~ 560 (1436)
.... ..........++..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+.. ......
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~~ 393 (617)
T TIGR00955 317 SGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNIN 393 (617)
T ss_pred hccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHHH
Confidence 1000 0000111223567889999999999999999999999999999999999999999998765432 234457
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHH
Q 046196 561 GALFFAVITIMFNGFSE-LSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFV 639 (1436)
Q Consensus 561 g~lff~v~~~~~~~~~~-~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 639 (1436)
|++|+.++...|.+... +.....++++|+|||...+|++++|++++.+.++|+.++.+++|++++|||+|+.+++.+|+
T Consensus 394 g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~ 473 (617)
T TIGR00955 394 GALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFL 473 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHH
Confidence 88999888887776544 45556899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhc
Q 046196 640 KQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFL 719 (1436)
Q Consensus 640 ~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~ 719 (1436)
.++++++++..++.+++.++++++++..+|+.++++..+++++++||+++.++||+||+|++|+||+.|++++++.|||.
T Consensus 474 ~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~ 553 (617)
T TIGR00955 474 TFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWS 553 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcc-ccCCCCC---CCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 046196 720 GKSW-GHVPPNS---TEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYL 776 (1436)
Q Consensus 720 ~~~~-~~~~~~~---~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l 776 (1436)
+..+ .|...+. +...|..+++.+|+... ++|.+++++++++++|.++++++|++.
T Consensus 554 ~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 554 DVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776 4432221 23458899999998764 458899999999999999999999763
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.9e-76 Score=746.67 Aligned_cols=608 Identities=22% Similarity=0.356 Sum_probs=465.5
Q ss_pred CCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHH
Q 046196 116 IPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTT 195 (1436)
Q Consensus 116 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 195 (1436)
.++++++|.|+++.+.......+... ....+...-...++..++ .++++|+|||+++++||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~-~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETRQI-QERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccccccccccccC-CCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45789999999999753210111100 111110000111111222 3457999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHc
Q 046196 196 LLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAA 275 (1436)
Q Consensus 196 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1436)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~----- 175 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTK----- 175 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCH-----
Confidence 999999998774 2589999999987532 23568999999999999999999999865432110 000
Q ss_pred cCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCC
Q 046196 276 NIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTG 355 (1436)
Q Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsg 355 (1436)
++....++.+++.+||++++||.||++..++|||||||||+||++|+.+|+||+|||||+|
T Consensus 176 -------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 176 -------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 0112346778999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHH
Q 046196 356 LDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFL 435 (1436)
Q Consensus 356 LD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 435 (1436)
||+.++.++++.|+++++ .++|+|+++||+..++.++||+|++|++|+++|+|+++++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 4677777777777789999999999999999999999999999999999999999999999
Q ss_pred HHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcC---CCCCCC-----CCCc-ccccCCCCCCHHHH
Q 046196 436 QEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELAT---PFDKSK-----SHPA-ALTTKKYGASKKEL 506 (1436)
Q Consensus 436 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 506 (1436)
.++++...+.+.....+.+ ...+++.+.|++... ++..+.... .....+ ..+. ......+..+++.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 112233344432111 111111000 000000 0000 00112245689999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 046196 507 LKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGALFFAVITIMF-NGFSELSMTIMKL 585 (1436)
Q Consensus 507 ~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~lff~v~~~~~-~~~~~~~~~~~~~ 585 (1436)
+..+++|.++. +|+......|+++.+++|+++|++|++.+ ..+.+...|++||.+++.++ ..+..+.....++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999887 67777778999999999999999999863 12334568999998777554 4567777778899
Q ss_pred chhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 046196 586 PVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRN 665 (1436)
Q Consensus 586 pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~ 665 (1436)
|+|+|||...+|++++|++++++.++|+.++.+++|++++|||+|+.+++.+|+.++++++++..++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCc-----cccCCCCCCCchhHHHHh
Q 046196 666 IIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKS-----WGHVPPNSTEPLGVVILK 740 (1436)
Q Consensus 666 ~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~-----~~~~~~~~~~~~g~~~l~ 740 (1436)
...|++++++..+++++|+||+++ +||+||+|++|+||+.|++++++.|||.+.+ ..|.........+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 7999999999999999999999999997654 234321110011111222
Q ss_pred hcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 046196 741 SRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYL 776 (1436)
Q Consensus 741 ~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l 776 (1436)
...+. ....|.+++++++++++|.++.+++|++.
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22222 23468899999999999999999998754
No 12
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-76 Score=743.06 Aligned_cols=583 Identities=30% Similarity=0.504 Sum_probs=488.7
Q ss_pred CCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHH
Q 046196 116 IPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTT 195 (1436)
Q Consensus 116 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 195 (1436)
...++++|+|++++.... .. ..+++|+||||+++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346789999999987431 01 3467999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHc
Q 046196 196 LLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAA 275 (1436)
Q Consensus 196 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1436)
||++|+|+..+...++|+|++||++.+....++.+|||.|+|.+++++||+|++.|++.++-... +.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~----- 139 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSK----- 139 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCH-----
Confidence 99999999987667899999999877766677899999999999999999999999998864321 111
Q ss_pred cCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCC
Q 046196 276 NIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTG 355 (1436)
Q Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsg 355 (1436)
++...++|.+++.|||.+|+||.||+...||+||||||||+||..|+.+|+||+|||||||
T Consensus 140 -------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 140 -------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 2344678999999999999999999998899999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHH
Q 046196 356 LDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFL 435 (1436)
Q Consensus 356 LD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 435 (1436)
||+.++.++++.|+++++. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||+..||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCchhhhhhhccCCCCCccCCHHHHHHHHH-hchhhhhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHH
Q 046196 436 QEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQ-SFHIGQKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFARE 514 (1436)
Q Consensus 436 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~ 514 (1436)
.++.+..+..+..... .......+.++ .....+... ......... .........++|.|+..+++|.
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R~ 347 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLE-ALEKSLSTS-----KKVEIGTSPSWWTQFKILLKRS 347 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHH-HHhhhcccc-----cccccccCCcHHHHHHHHHHHH
Confidence 9987743110000000 00000001111 000000000 000000000 0001111678999999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHHHHHHHHHHHHHHHH-HHHHHHhccchhHHhhc
Q 046196 515 YLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGALFFAVITIMFNGFS-ELSMTIMKLPVFYKQRD 593 (1436)
Q Consensus 515 ~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~lff~v~~~~~~~~~-~~~~~~~~~pvf~k~r~ 593 (1436)
+....|++.+...|.+|.+.+++++|++|++.+.+.... ....|++|+.+.+..+.... .+.....++++|.||+.
T Consensus 348 ~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~ 424 (613)
T KOG0061|consen 348 LKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETS 424 (613)
T ss_pred hHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHh
Confidence 999999999999999999999999999999985543322 25678888888877666655 57777899999999999
Q ss_pred ccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Q 046196 594 FLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFG 673 (1436)
Q Consensus 594 ~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~ 673 (1436)
..+|+.++|++++.+.++|+.++.+++|++++|||+|+.++..+|+.+.++.++...+++++..++++..++...|.+++
T Consensus 425 ~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~ 504 (613)
T KOG0061|consen 425 SGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLG 504 (613)
T ss_pred cCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCccccCCC--CCCCchhHHHHhhcCCCCCCchh
Q 046196 674 SFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKSWGHVPP--NSTEPLGVVILKSRGLFPNAYWY 751 (1436)
Q Consensus 674 ~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~g~~~~~~~~ 751 (1436)
++..+++++++||+++.+.+|+||.|+.|+|+..|++++++.|||.+....|... ......|..+++..++...+ .
T Consensus 505 ~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 582 (613)
T KOG0061|consen 505 PVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--F 582 (613)
T ss_pred HHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--c
Confidence 9999999999999999999999999999999999999999999999744444433 34566788999998887655 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Q 046196 752 WIGVGALLGYVLLFNFLFTVALKYL 776 (1436)
Q Consensus 752 w~~~g~l~~~~~~f~~~~~~~l~~l 776 (1436)
|.++.+++++.++|.+++++++++.
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~ 607 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFR 607 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999998764
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-73 Score=719.02 Aligned_cols=818 Identities=20% Similarity=0.260 Sum_probs=436.9
Q ss_pred hhHHHHHHHHHhcccchHHHHHHHHHHHHhcCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccC
Q 046196 82 ERRNLIERLLKIAEEDNEKFLLKLKDRIERVGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLP 161 (1436)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (1436)
..+.-..+++++++..+..-... ....-......+++|+|+.+++.
T Consensus 316 ~a~~aa~~I~~~i~~~~~i~~~~----~~~~~~~~~~g~ief~nV~FsYP------------------------------ 361 (1228)
T KOG0055|consen 316 KARAAAYRIFETIDRKPSIDPYS----KGGRVLSSIKGEIEFRNVCFSYP------------------------------ 361 (1228)
T ss_pred ccccchHHHHHHhcCCCCCCccc----ccCCcccccccceEEEEEEecCC------------------------------
Confidence 34455667777777655521100 01111223467899999988862
Q ss_pred CCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCC
Q 046196 162 SRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDL 238 (1436)
Q Consensus 162 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~ 238 (1436)
+++ +..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|+++.++..+ ..+|.|+|+|.
T Consensus 362 sRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 362 SRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 232 456999999999999999999999999999999999999998 99999999999887653 67999999997
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
++..||+|||.|+ +||.+.+++.+|+++++.... +..|++..||.|
T Consensus 438 -lF~~tI~eNI~~G-------------------------~~dat~~~i~~a~k~ana~~f--------i~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 -LFATTIRENIRYG-------------------------KPDATREEIEEAAKAANAHDF--------ILKLPDGYDTLV 483 (1228)
T ss_pred -hhcccHHHHHhcC-------------------------CCcccHHHHHHHHHHccHHHH--------HHhhHHhhcccc
Confidence 5567999999997 456667777788777666544 455899999999
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
|+++.. |||||||||+|||||+.+|+|||||||||+||+.++..+.+.|.+.. .++|+|+ +.|.. .+.+.+|+|+
T Consensus 484 ge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRL-StIrnaD~I~ 558 (1228)
T KOG0055|consen 484 GERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRL-STIRNADKIA 558 (1228)
T ss_pred cCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeeh-hhhhccCEEE
Confidence 998875 99999999999999999999999999999999999999999999864 3677777 44544 4556699999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHH--HHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhch---hh
Q 046196 399 LLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFL--QEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFH---IG 473 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 473 (1436)
+|++|+|++.|+++|+++.- | --++.+ |+..+.++. ..+..+ ...+.....+.+. ..
T Consensus 559 v~~~G~IvE~G~h~ELi~~~---G-------~Y~~lv~~Q~~~~~~~~-~~~~~~-------~~~~~~~s~~~s~~~~~~ 620 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIALG---G-------IYSSLVRLQELEKAAED-EEEEES-------LKEERSRSLKSSSSSPSL 620 (1228)
T ss_pred EEECCEEEEecCHHHHHhcc---c-------hHHHHHHHHhhhhhhhc-cccccc-------hhhhhhhccccccccccc
Confidence 99999999999999998620 1 001111 111111110 000000 0000000000000 00
Q ss_pred hhh--hhhh--cCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH-------HHHHHHHh
Q 046196 474 QKL--GDEL--ATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFF-------SASVAMTL 542 (1436)
Q Consensus 474 ~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~-------~ali~~t~ 542 (1436)
.+. .... ..+.++ ..... ........+.++.+ ...+..+...+.-.+..++ .+.+.+.+
T Consensus 621 ~~~~~~~~~~~~~~~~e-~~~~~-~~~~~~~~s~~~i~--------k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~ 690 (1228)
T KOG0055|consen 621 SRGSNRSNLLSVKPEGE-DPEEP-VSEEDEKVSFWRIF--------KLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQV 690 (1228)
T ss_pred cCCcccccccccccccc-ccccc-cccccccccHHHHH--------HhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 000 0000 000000 00000 00011223333333 3333333333333332222 22222222
Q ss_pred ---hhccccCcccccccchhhHHHHHHHHH----------HHHHHHHHHHHHHhccchhHHh--hcccccchhh--hHHH
Q 046196 543 ---FLRTEMHRSTVEDGGIYMGALFFAVIT----------IMFNGFSELSMTIMKLPVFYKQ--RDFLFFPAWA--YSLP 605 (1436)
Q Consensus 543 ---f~~~~~~~~~~~~~~~~~g~lff~v~~----------~~~~~~~~~~~~~~~~pvf~k~--r~~~~y~~~a--y~l~ 605 (1436)
|...+. +..........++|.++.. .+|.-..|....-.+...|.+- .+..||.--- -.+.
T Consensus 691 ~~~f~~~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~ 768 (1228)
T KOG0055|consen 691 LEAFYPPDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALS 768 (1228)
T ss_pred HHHHhCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHH
Confidence 221111 1111111112222222211 1111122222111111111110 0111221110 0111
Q ss_pred HHH-HHhh---------HHHHH----HHHHhhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-----
Q 046196 606 TWI-LKIP---------ITFIE----VGIWVFMTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNI----- 666 (1436)
Q Consensus 606 ~~l-~~iP---------~~~~~----~~i~~~i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~----- 666 (1436)
.-+ .+.| ++.+. .++..+++-|..|..-.+--...+- ++........+++.......
T Consensus 769 ~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~P----ll~~~~~~~~~~~~~~~~~~~~~~~ 844 (1228)
T KOG0055|consen 769 SRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFP----LLILSGYLQKKFLKGFSKDDKKAYE 844 (1228)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 111 1111 11110 1111111111111100000000000 00000000111111111100
Q ss_pred ----HHHHHHHHHHHHHHHHHhceeec---c--CchhhHHHHHHhHcHHHHHHHHHHHhhhcCCccccCCCCCCCchhHH
Q 046196 667 ----IVANTFGSFANLTVLVLGGFILS---R--DDVKKWWLWGYWFSPMMYGQNALAVNEFLGKSWGHVPPNSTEPLGVV 737 (1436)
Q Consensus 667 ----~~a~~~~~~~~l~~~l~~Gf~i~---~--~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~ 737 (1436)
+....+..+-.+-.+..-..++. . +....-...-.+++-+.|++.....---.+. ....|..
T Consensus 845 ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~---------~f~~G~~ 915 (1228)
T KOG0055|consen 845 EASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYAL---------SFWYGAR 915 (1228)
T ss_pred HHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhHH
Confidence 00011111110000000000000 0 0000001111122222222211110000000 0000100
Q ss_pred HHhhcCCCCCCchhHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCccccchHHHHhhhhccCCCCccccccccccccccc
Q 046196 738 ILKSRGLFPNAYWYWIGVGALLGYVLLFNF-LFTVALKYLDPFGKPQAILSEEALAKKNACKTEEPVELSSGVQSSYGEV 816 (1436)
Q Consensus 738 ~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1436)
|-..|...... -+-++. ++.|.. ...-+..|...+.+ +..+....-. ... +. +
T Consensus 916 -Li~~g~~~~~~----~~~vf~--~l~~ta~~~~~~~s~~Pd~~k--a~~Aa~~iF~---i~d-r~-------~------ 969 (1228)
T KOG0055|consen 916 -LISNGEMTFED----VFRVFM--ALSFTAMALGQASSYAPDISK--AKIAAGSIFE---ILD-RK-------P------ 969 (1228)
T ss_pred -HHhcCCcCHHH----HHHHHH--HHHHHHHHHHHHHhhCcHHHH--HHHHHHHHHH---Hhc-CC-------C------
Confidence 00011100000 000000 011111 01111112111100 0000000000 000 00 0
Q ss_pred ccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHh
Q 046196 817 RSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDV 896 (1436)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~ 896 (1436)
..+.....+...|.-...++|+||++.|+..+ ..++|+|+|+++++|+.+||+|||||||||.+.+
T Consensus 970 ----~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~L 1035 (1228)
T KOG0055|consen 970 ----TIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISL 1035 (1228)
T ss_pred ----CCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHH
Confidence 00000011122233446799999999987543 4579999999999999999999999999999999
Q ss_pred HcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-
Q 046196 897 LAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMEL- 972 (1436)
Q Consensus 897 L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~- 972 (1436)
|-+.+. +.+|.|.|||.+++. ..+|+.+|.|.|+|.+|. -|++||+.|+. . +.+.++ +.+..+.
T Consensus 1036 LeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~A 1103 (1228)
T KOG0055|consen 1036 LERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLA 1103 (1228)
T ss_pred HHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHh
Confidence 998776 679999999998754 456788999999999975 69999999971 1 133222 2222222
Q ss_pred ------cCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 046196 973 ------VELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1046 (1436)
Q Consensus 973 ------l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~ 1046 (1436)
.+|.+-.|+.+|..| .+||||||||++||||+++||+||+|||.||.||+++.+.|++.|.+.. .|+|.|++
T Consensus 1104 NaH~FI~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvI 1181 (1228)
T KOG0055|consen 1104 NAHNFISSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVI 1181 (1228)
T ss_pred hhHHHHhcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEE
Confidence 245566788888654 5899999999999999999999999999999999999999999999864 58999999
Q ss_pred ecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1047 IHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1047 ~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|+++ ....+|.|.|+++ |+++..|..
T Consensus 1182 AHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1182 AHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred ecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 99976 6788999999996 799999974
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.6e-73 Score=732.16 Aligned_cols=755 Identities=22% Similarity=0.269 Sum_probs=424.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRE 247 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E 247 (1436)
+.|+|||++|++|+++||+||.||||||||.+|.|+++.. +|+|.++| .++||+|++| +.+.||||
T Consensus 535 ~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pW-I~ngTvre 600 (1381)
T KOG0054|consen 535 PTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPW-IQNGTVRE 600 (1381)
T ss_pred ccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccH-hhCCcHHH
Confidence 3799999999999999999999999999999999999876 99999999 5999999999 55779999
Q ss_pred HHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 046196 248 TLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGIS 327 (1436)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 327 (1436)
||.||..++. +||+.+.+.|..++|.++.|++| .|.||++++ +||
T Consensus 601 NILFG~~~d~--~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nLS 645 (1381)
T KOG0054|consen 601 NILFGSPYDE--ERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NLS 645 (1381)
T ss_pred hhhcCccccH--HHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CCc
Confidence 9999987753 68999999998888877666555 699999988 599
Q ss_pred hhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEE
Q 046196 328 GGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVY 407 (1436)
Q Consensus 328 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~ 407 (1436)
||||||+++|||+++++||++||+|.|++|+++..+|++.+... .++++|+|.++| ..+..+.+|.|++|++|+|+.
T Consensus 646 GGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~--~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~~ 722 (1381)
T KOG0054|consen 646 GGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRG--LLRGKTVILVTH-QLQFLPHADQIIVLKDGKIVE 722 (1381)
T ss_pred HhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHh--hhcCCEEEEEeC-chhhhhhCCEEEEecCCeEec
Confidence 99999999999999999999999999999999999999766532 345566666777 668899999999999999999
Q ss_pred ecChhHHHH---HHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCC
Q 046196 408 QGPRENVLE---FFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATPF 484 (1436)
Q Consensus 408 ~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1436)
+|+++|+.+ .|+++ ...+ .. +++.. .....+.......+. +. +.........+. ...
T Consensus 723 ~Gty~el~~~~~~~~~l-~~~~------------~~--~~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~ 782 (1381)
T KOG0054|consen 723 SGTYEELLKSGGDFAEL-AHEE------------ES--EQEEE-ASEKDLESGESSRES-ES-RSLESLSSEEEK--SKD 782 (1381)
T ss_pred ccCHHHHHhcchhHHHH-hhcc------------ch--hhccc-cccccccccccccch-hh-hhhhhhcccccc--ccc
Confidence 999999984 23222 0000 00 00000 000000000000000 00 000000000000 000
Q ss_pred CCCC-CCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHH-HHHHHHHhhhccccCcc--cc---ccc
Q 046196 485 DKSK-SHPAALTTKKYGASKKELLKACFAREYLLMKRNSF-VYFFKMFQIFF-SASVAMTLFLRTEMHRS--TV---EDG 556 (1436)
Q Consensus 485 ~~~~-~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~-~~~~~~~~~~~-~ali~~t~f~~~~~~~~--~~---~~~ 556 (1436)
.+.. .+......+..+.-.|..++.+++- ..... ..++-+.+... ...+....|+....+.. .. .+.
T Consensus 783 ~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a-----~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~ 857 (1381)
T KOG0054|consen 783 EKEEEDKLVQEEERETGKVSWSVYKKYIKA-----AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVST 857 (1381)
T ss_pred ccchhhHHHHHHHHhcCEeeHHHHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCc
Confidence 0000 0000000112222333333332221 11111 11111112222 12233334433222111 11 112
Q ss_pred c----hhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhcccc
Q 046196 557 G----IYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFE 632 (1436)
Q Consensus 557 ~----~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~ 632 (1436)
. .|..+.+..++..++.++.-....+.....++.+ +-.-+.+.|++|++...-.-
T Consensus 858 ~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~------------ml~~Ilrapm~FFdtTP~GR--------- 916 (1381)
T KOG0054|consen 858 SFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDK------------LLNSILRAPMSFFDTTPTGR--------- 916 (1381)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHhCcchhcCCCCccc---------
Confidence 2 2333333333333333333333333222222222 33456677777765432221
Q ss_pred ccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHH
Q 046196 633 SNIERFVKQYFL-----LLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMM 707 (1436)
Q Consensus 633 ~~~~~f~~~~l~-----l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ 707 (1436)
-.+||.+..-. .+.+......+..+++.+.--..+...+..++..+. ++||.--.+
T Consensus 917 -ILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~------------------v~~~~~~~~ 977 (1381)
T KOG0054|consen 917 -ILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLG------------------VIYYFVQRY 977 (1381)
T ss_pred -hhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHH------------------HHHHHHHHH
Confidence 13444433221 122222222222222222111111111111111111 112222222
Q ss_pred HHHHHHHHhhhcCCccccCCCCCCC-chhHHHHhhcCC----------------------CCCCchhHHHHHHHHHHHHH
Q 046196 708 YGQNALAVNEFLGKSWGHVPPNSTE-PLGVVILKSRGL----------------------FPNAYWYWIGVGALLGYVLL 764 (1436)
Q Consensus 708 y~~~al~~nef~~~~~~~~~~~~~~-~~g~~~l~~~g~----------------------~~~~~~~w~~~g~l~~~~~~ 764 (1436)
|--.+..+.+..+..-+....+..+ ..|...+++++- .....|+.+.+-.+.+.+++
T Consensus 978 Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~ 1057 (1381)
T KOG0054|consen 978 YLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVL 1057 (1381)
T ss_pred HHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333322222211111000 011111111111 01123544444444433333
Q ss_pred HHHHHHHHHHhcCC-CCCccccchHH--------------HHhhhhccCCCCccccccccccccccccccccccc-cccc
Q 046196 765 FNFLFTVALKYLDP-FGKPQAILSEE--------------ALAKKNACKTEEPVELSSGVQSSYGEVRSFNEADQ-NRKR 828 (1436)
Q Consensus 765 f~~~~~~~l~~l~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 828 (1436)
+..++.+...-... .+.....++.. ...+......++..+ +........... ..+.
T Consensus 1058 ~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~e--------Y~~~~~E~p~~~~~~~p 1129 (1381)
T KOG0054|consen 1058 IAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLE--------YTDIPSEAPLEIEESRP 1129 (1381)
T ss_pred HHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHH--------HhcCCCCCCCCCcCCCC
Confidence 33332222211100 00000001100 000001111111101 111000000000 0112
Q ss_pred CcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeE
Q 046196 829 GMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSG 908 (1436)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G 908 (1436)
+..+| ....|+|+|++.++. ++-..+|||||++|+|||++||+|++|||||||+++|.+... +.+|
T Consensus 1130 p~~WP-~~G~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G 1195 (1381)
T KOG0054|consen 1130 PPSWP-SKGEIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEG 1195 (1381)
T ss_pred CCCCC-CCCeEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCC
Confidence 22344 345799999755442 122359999999999999999999999999999999999876 5789
Q ss_pred EEEECCccCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc-
Q 046196 909 SITISGYPKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVG- 984 (1436)
Q Consensus 909 ~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g- 984 (1436)
+|.|||.++.+ .++|++++.+||++.+|. -|||.||. |.+...++ .+.++++..+|.+......+
T Consensus 1196 ~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NLD-------Pf~e~sD~---~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1196 EILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNLD-------PFDEYSDD---EIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred eEEEcCeecccccHHHHHhcCeeeCCCCceec-CccccccC-------cccccCHH---HHHHHHHHhChHHHHhhCCcC
Confidence 99999999765 457888999999999986 59999995 33322221 24555555555433322211
Q ss_pred -----CCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhC
Q 046196 985 -----LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFD 1059 (1436)
Q Consensus 985 -----~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1059 (1436)
.+++.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-.+ +||||+++|+.+ ....+|
T Consensus 1265 Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~D 1341 (1381)
T KOG0054|consen 1265 LDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSD 1341 (1381)
T ss_pred CCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcC
Confidence 135678999999999999999999999999999999999999999999999654 799999999976 455689
Q ss_pred eEEEEecCcEEEEEcCC
Q 046196 1060 ELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1060 ~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+||++ |+++.+|.+
T Consensus 1342 rVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1342 RVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred eEEEeeC-CeEeecCCh
Confidence 9999997 789888876
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.8e-70 Score=733.27 Aligned_cols=224 Identities=26% Similarity=0.396 Sum_probs=192.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++. .++.+|+|||+.|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 5889998876631 12469999999999999999999999999999999999987 5699999999887
Q ss_pred Cc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046196 918 NQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGq 995 (1436)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2235679999999999999999999998776653 233444566889999999998888764 4799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++..+|||+++|.+ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 67789999999996 79999998
Q ss_pred CCcchhHHHHHhh
Q 046196 1076 LGRHCSQLIKYFE 1088 (1436)
Q Consensus 1076 ~~~~~~~~~~yf~ 1088 (1436)
. +++...|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 45655553
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.7e-67 Score=716.33 Aligned_cols=211 Identities=23% Similarity=0.319 Sum_probs=175.1
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++++++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999988741 12359999999999999999999999999999999999987 578999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+.. ..+++.+++|||++.++.. |++|||.+.. ..++ +.+.++++..++.+. .|+.+|.
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~td----eei~~Al~~a~l~~~I~~lp~GLdt~Vge- 1370 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHND----ADLWESLERAHLKDVIRRNSLGLDAEVSE- 1370 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCCH----HHHHHHHHHcCcHHHHHhCccccCccccC-
Confidence 754 4567889999999998865 9999996431 1222 225666666665432 3445553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
++.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1371 ~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1371 AGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 346899999999999999999999999999999999999999999999875 4899999999975 5667999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|++
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 799999975
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.4e-66 Score=709.75 Aligned_cols=211 Identities=22% Similarity=0.314 Sum_probs=175.3
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++++++. +.+.+|+|+|++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999988731 22459999999999999999999999999999999999987 579999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+.+ ..+++.++||||++.+++. |++|||.+.. ..+++ .+.++++..++.+. .|+.+|.
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e- 1367 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHNDA----DLWEALERAHIKDVIDRNPFGLDAEVSE- 1367 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCCHH----HHHHHHHHcCCHHHHHhCcCCCCceecC-
Confidence 753 4567889999999998875 9999996421 22222 25666776666543 2444553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
++.+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 346899999999999999999999999999999999999999999999875 4899999999975 5667999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 799999975
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.2e-66 Score=611.96 Aligned_cols=474 Identities=27% Similarity=0.332 Sum_probs=361.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCcceEEEECCccCCCccc-------cceEEEecCCC-
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD-LKFSGRVTYNGHGMEEFVP-------QRTSAYISQND- 237 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~- 237 (1436)
.++++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4568999999987754433 25799999995
Q ss_pred -CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 238 -LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 238 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
.+-|-+||.+.|.=..+..+... ..+...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 44566888888865443322110 12233456678999999987654
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
+++++.|||||||||.||+||+.+|++|++||||++||+.++.+|++.|+++.+. .++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 6789999999999999999999999999999999999999999999999999864 578888899999999999999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhh
Q 046196 397 LILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKL 476 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1436)
|+||++|++++.|+.++++.. |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999998641 11 11100 00
Q ss_pred hhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCccccccc
Q 046196 477 GDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDG 556 (1436)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~ 556 (1436)
..
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHH
Q 046196 557 GIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIE 636 (1436)
Q Consensus 557 ~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 636 (1436)
..|.....+
T Consensus 257 ---------------------------a~p~~~~~~-------------------------------------------- 265 (539)
T COG1123 257 ---------------------------AVPRLGDEK-------------------------------------------- 265 (539)
T ss_pred ---------------------------hCCCccccc--------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHh
Q 046196 637 RFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVN 716 (1436)
Q Consensus 637 ~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 716 (1436)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhc
Q 046196 717 EFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNA 796 (1436)
Q Consensus 717 ef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 796 (1436)
.
T Consensus 266 --------~----------------------------------------------------------------------- 266 (539)
T COG1123 266 --------I----------------------------------------------------------------------- 266 (539)
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeC
Q 046196 797 CKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRP 876 (1436)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 876 (1436)
. ..+.. . . .+ ...-++++|++..+..+.... ....+...+++||||++++
T Consensus 267 --~--------~~~~~------~---~--------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~ 316 (539)
T COG1123 267 --I--------RLPRR------G---P--------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLRE 316 (539)
T ss_pred --c--------ccccc------c---c--------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecC
Confidence 0 00000 0 0 00 011345555544443321110 0001235689999999999
Q ss_pred CeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC--Cc---ccccceEEEeecCC--CCCCCCcHHHHHHHHH
Q 046196 877 GVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK--NQ---ETFARISGYCEQTD--IHSPHVTVYESLVYSA 949 (1436)
Q Consensus 877 Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~ 949 (1436)
||++||+|+||||||||.++|+|+.+ |.+|+|.++|.+. +. ...++.+-+++|++ .+.|.+||++.+.-..
T Consensus 317 GE~lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL 394 (539)
T COG1123 317 GETLGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPL 394 (539)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHH
Confidence 99999999999999999999999987 4799999999772 11 22345566777765 5789999999998765
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHH
Q 046196 950 WLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1028 (1436)
Q Consensus 950 ~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~ 1028 (1436)
....+. ...++++++.++++.++|.+ ..+.. +.+||||||||++|||||+.+|++|++|||||.||+..+..
T Consensus 395 ~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~ 467 (539)
T COG1123 395 RIHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQ 467 (539)
T ss_pred hhhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHH
Confidence 443322 24566778999999999985 34443 56899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1029 VMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1029 i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.++|+++.++ |.|.|++|||.+ -+...||||++|.+ |+++..||.
T Consensus 468 VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 468 VLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999766 999999999976 47779999999996 799999974
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.5e-65 Score=697.42 Aligned_cols=211 Identities=19% Similarity=0.245 Sum_probs=175.6
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++++++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 46999999988742 11359999999999999999999999999999999999887 568999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+.. ..+++.++||||++.+++. |++|||.... ..+++ .+.++++..++.+. .|+.+|.
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e- 1417 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYSDE----EVWWALELAHLKTFVSALPDKLDHECAE- 1417 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCCHH----HHHHHHHHcCcHHHHhhCccCCCceecC-
Confidence 754 4567889999999999875 9999996211 22222 25667777666533 3455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
++.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1418 ~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1418 GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346799999999999999999999999999999999999999999999865 4799999999965 5677999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 799999975
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.3e-65 Score=688.80 Aligned_cols=217 Identities=20% Similarity=0.316 Sum_probs=177.4
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC------------
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 904 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~------------ 904 (1436)
..++|+||+|+++.. .+.++|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999988521 1235999999999999999999999999999999999988741
Q ss_pred ----------------------------------------ceeEEEEECCccCC---cccccceEEEeecCCCCCCCCcH
Q 046196 905 ----------------------------------------YVSGSITISGYPKN---QETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 905 ----------------------------------------~~~G~i~i~g~~~~---~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|++||.++. ...+++.+|||+|++.+| +.|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 15899999999874 345778899999999887 5799
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-------PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1014 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-------~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illl 1014 (1436)
+|||.|+. + +.+.+ .++++++..++. +-.|+.+|. ++..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~e----eI~~A~k~A~l~~fI~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATRE----DVKRACKFAAIDEFIESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCHH----HHHHHHHHcCCHHHHHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998752 2 22322 245566655543 334777774 3567999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhhCeEEEEecC---cE-EEEEcCC
Q 046196 1015 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFDAFDELLLMKRG---GE-EIYVGPL 1076 (1436)
Q Consensus 1015 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G---g~-~~y~G~~ 1076 (1436)
|||||+||+.+.+.|++.|+++. .+++|+|+++|+++ ....+|+|++|++| |+ ++..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999974 57789999999973 56 4578874
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-64 Score=629.34 Aligned_cols=457 Identities=21% Similarity=0.291 Sum_probs=348.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCcceEEEECCccCCCccc----cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK--DLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 240 (1436)
+++|+|||+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 3599999999999999999999999999999999999986 5 8999999998764332 24699999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.|+......+. ... .+....++.+++.+||++..+..+
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 141 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGI-------MDY------------------------DAMYLRAQKLLAQLKLDINPATPV-- 141 (506)
T ss_pred CCCcHHHHhhhcccccccCC-------cCH------------------------HHHHHHHHHHHHHcCCCCCcccch--
Confidence 99999999998743210000 000 001123566789999987777655
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.++||+|++|
T Consensus 142 ---~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvi~~tH~~~~~~~~~d~v~~l 216 (506)
T PRK13549 142 ---GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA--HGIACIYISHKLNEVKAISDTICVI 216 (506)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHHhcCEEEEE
Confidence 45999999999999999999999999999999999999999999999854 3556777899999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhh
Q 046196 401 SDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDEL 480 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1436)
++|++++.|+.+++.. .+..+
T Consensus 217 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 237 (506)
T PRK13549 217 RDGRHIGTRPAAGMTE--------------------------------------------DDIIT--------------- 237 (506)
T ss_pred ECCEEeeecccccCCH--------------------------------------------HHHHH---------------
Confidence 9999998886543210 00000
Q ss_pred cCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhh
Q 046196 481 ATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYM 560 (1436)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~ 560 (1436)
.+ .
T Consensus 238 ---------------------------------~~----------------------------~---------------- 240 (506)
T PRK13549 238 ---------------------------------MM----------------------------V---------------- 240 (506)
T ss_pred ---------------------------------Hh----------------------------h----------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHH
Q 046196 561 GALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVK 640 (1436)
Q Consensus 561 g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~ 640 (1436)
+-.
T Consensus 241 ---------------------------------------------------------------------~~~-------- 243 (506)
T PRK13549 241 ---------------------------------------------------------------------GRE-------- 243 (506)
T ss_pred ---------------------------------------------------------------------CcC--------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcC
Q 046196 641 QYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLG 720 (1436)
Q Consensus 641 ~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~ 720 (1436)
.
T Consensus 244 ----------------------------------------------------~--------------------------- 244 (506)
T PRK13549 244 ----------------------------------------------------L--------------------------- 244 (506)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred CccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCC
Q 046196 721 KSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTE 800 (1436)
Q Consensus 721 ~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1436)
. . .. + .
T Consensus 245 ------~---~-------------------------------------------~~-~--------------------~- 250 (506)
T PRK13549 245 ------T---A-------------------------------------------LY-P--------------------R- 250 (506)
T ss_pred ------c---c-------------------------------------------cc-c--------------------c-
Confidence 0 0 00 0 0
Q ss_pred CcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEE
Q 046196 801 EPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLT 880 (1436)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 880 (1436)
... . + ....++++|+++.++. .+++.+|+|+||+|++||++
T Consensus 251 ------~~~-------------~---------~-~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~ 291 (506)
T PRK13549 251 ------EPH-------------T---------I-GEVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEIL 291 (506)
T ss_pred ------ccc-------------C---------C-CCceEEEecCcccccc----------ccccccccceeeEEcCCcEE
Confidence 000 0 0 0013567777654420 01235899999999999999
Q ss_pred EEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCC---CCCCCCcHHHHHHHHHHhcC
Q 046196 881 ALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTD---IHSPHVTVYESLVYSAWLRL 953 (1436)
Q Consensus 881 ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~l~~ 953 (1436)
||+||||||||||+++|+|..++ +.+|+|.++|.++... ..++.++|++|+. .+++.+||.|++.+......
T Consensus 292 ~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~ 370 (506)
T PRK13549 292 GIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRF 370 (506)
T ss_pred EEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhh
Confidence 99999999999999999998752 2589999999875321 1234689999985 46788999999987532111
Q ss_pred CC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHH
Q 046196 954 PP--EVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1030 (1436)
Q Consensus 954 ~~--~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~ 1030 (1436)
.. ..+.++.++.++++++.+++. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..++
T Consensus 371 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~ 445 (506)
T PRK13549 371 TGGSRIDDAAELKTILESIQRLKVKTASPELA-----IARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIY 445 (506)
T ss_pred ccCcccChHHHHHHHHHHHHhcCccCCCcccc-----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHH
Confidence 10 012233445688999999996 456655 3579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1031 RTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1031 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
+.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..
T Consensus 446 ~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 490 (506)
T PRK13549 446 KLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINH 490 (506)
T ss_pred HHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccc
Confidence 999999888999999999986 57788999999996 6888888764
No 22
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-64 Score=629.61 Aligned_cols=458 Identities=21% Similarity=0.289 Sum_probs=347.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2469999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++..... ..+.. ... + ..+....++.+++.+||++..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~-~~~-------------~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV-NII-------------D-----------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc-ccc-------------C-----------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 000 0 00111245668999999877776654
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999865 3 55677789999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcC
Q 046196 403 GQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELAT 482 (1436)
Q Consensus 403 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1436)
|++++.|+++++... +..+..
T Consensus 221 G~i~~~g~~~~~~~~--------------------------------------------~~~~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSND--------------------------------------------DIVRLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCHH--------------------------------------------HHHHHh---------------
Confidence 999998876543100 000000
Q ss_pred CCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHH
Q 046196 483 PFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGA 562 (1436)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~ 562 (1436)
.. .. ..
T Consensus 242 -------------------------------------------------------------~~----~~-~~-------- 247 (510)
T PRK09700 242 -------------------------------------------------------------VG----RE-LQ-------- 247 (510)
T ss_pred -------------------------------------------------------------cC----CC-cc--------
Confidence 00 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHH
Q 046196 563 LFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQY 642 (1436)
Q Consensus 563 lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 642 (1436)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCc
Q 046196 643 FLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKS 722 (1436)
Q Consensus 643 l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 722 (1436)
..+
T Consensus 248 -------------------------------------------------------------------------~~~---- 250 (510)
T PRK09700 248 -------------------------------------------------------------------------NRF---- 250 (510)
T ss_pred -------------------------------------------------------------------------ccc----
Confidence 000
Q ss_pred cccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCCc
Q 046196 723 WGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEEP 802 (1436)
Q Consensus 723 ~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1436)
. . . . +
T Consensus 251 ----~-------------------~------------------------------~--------------------~--~ 255 (510)
T PRK09700 251 ----N-------------------A------------------------------M--------------------K--E 255 (510)
T ss_pred ----c-------------------c------------------------------c--------------------c--c
Confidence 0 0 0 0 0
Q ss_pred ccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEE
Q 046196 803 VELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTAL 882 (1436)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai 882 (1436)
... . +..+..++++|+++.+ ..+|+|+||+|++||+++|
T Consensus 256 ----~~~-------------~---------~~~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l 294 (510)
T PRK09700 256 ----NVS-------------N---------LAHETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGF 294 (510)
T ss_pred ----ccc-------------c---------CCCCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEE
Confidence 000 0 0001136777776431 1279999999999999999
Q ss_pred EccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecC---CCCCCCCcHHHHHHHHHHhc---
Q 046196 883 MGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQT---DIHSPHVTVYESLVYSAWLR--- 952 (1436)
Q Consensus 883 ~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~lTv~e~l~~~~~l~--- 952 (1436)
+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+ ..+++.+||+|++.+....+
T Consensus 295 ~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~ 372 (510)
T PRK09700 295 AGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGG 372 (510)
T ss_pred ECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccccccc
Confidence 99999999999999999886 5689999999876321 234568999997 45788999999998653211
Q ss_pred CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHH
Q 046196 953 LPP--E-VDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1028 (1436)
Q Consensus 953 ~~~--~-~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~ 1028 (1436)
... . ......++.++++++.+++. +..++. +..|||||||||+|||+|+.+|++|+|||||+|||+.++..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~ 447 (510)
T PRK09700 373 YKGAMGLFHEVDEQRTAENQRELLALKCHSVNQN-----ITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAE 447 (510)
T ss_pred ccccccccChHHHHHHHHHHHHhcCCCCCCccCc-----cccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHH
Confidence 000 0 11222334578899999996 666665 35799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1029 VMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1029 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+++.|++++++|.|||++||++. .+...+|++++|++ |+++..++.
T Consensus 448 l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 448 IYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999878999999999986 57788999999996 688888764
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.2e-64 Score=625.46 Aligned_cols=449 Identities=21% Similarity=0.323 Sum_probs=345.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 35999999999999999999999999999999999999998 9999999988754321 2469999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.|+......... ... .+....++.+++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGR------IDW------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCc------cCH------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 9999999986432100000 000 0011234667999999887776554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
.|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. .+++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS--QGRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 5999999999999999999999999999999999999999999999854 355677789999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcC
Q 046196 403 GQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELAT 482 (1436)
Q Consensus 403 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1436)
|+++..|+.+++.. .+..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998876543210 0000000
Q ss_pred CCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHH
Q 046196 483 PFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGA 562 (1436)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~ 562 (1436)
+
T Consensus 238 -------------------------------------------------------------~------------------ 238 (501)
T PRK10762 238 -------------------------------------------------------------V------------------ 238 (501)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHH
Q 046196 563 LFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQY 642 (1436)
Q Consensus 563 lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 642 (1436)
+
T Consensus 239 -------------------------------------------------------------------~------------ 239 (501)
T PRK10762 239 -------------------------------------------------------------------G------------ 239 (501)
T ss_pred -------------------------------------------------------------------C------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCc
Q 046196 643 FLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKS 722 (1436)
Q Consensus 643 l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 722 (1436)
..
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK10762 240 ------------------------------------------------------------------------------RK 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCCc
Q 046196 723 WGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEEP 802 (1436)
Q Consensus 723 ~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1436)
..... +
T Consensus 242 ~~~~~--------------------------------------------------------------------------~ 247 (501)
T PRK10762 242 LEDQY--------------------------------------------------------------------------P 247 (501)
T ss_pred ccccc--------------------------------------------------------------------------c
Confidence 00000 0
Q ss_pred ccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEE
Q 046196 803 VELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTAL 882 (1436)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai 882 (1436)
..+ . +..+..++++|++. .+|+|+||+|++||+++|
T Consensus 248 -----~~~--------~-------------~~~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~l 283 (501)
T PRK10762 248 -----RLD--------K-------------APGEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGV 283 (501)
T ss_pred -----ccc--------c-------------CCCCcEEEEeCccc------------------CCcccceEEEcCCcEEEE
Confidence 000 0 00011356666651 269999999999999999
Q ss_pred EccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCC---CCCCCCcHHHHHHHHHHhcCC-
Q 046196 883 MGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTD---IHSPHVTVYESLVYSAWLRLP- 954 (1436)
Q Consensus 883 ~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~l~~~- 954 (1436)
+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+. .+++.+||.|++.+.......
T Consensus 284 iG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~ 361 (501)
T PRK10762 284 SGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSR 361 (501)
T ss_pred ecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcc
Confidence 99999999999999999976 5689999999876421 2345699999985 577889999999875321100
Q ss_pred --CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHH
Q 046196 955 --PEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1031 (1436)
Q Consensus 955 --~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~ 1031 (1436)
.....++..+.++++++.+++. +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+
T Consensus 362 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~ 436 (501)
T PRK10762 362 AGGSLKHADEQQAVSDFIRLFNIKTPSMEQA-----IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQ 436 (501)
T ss_pred cccccCHHHHHHHHHHHHHhcCCCCCCccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHH
Confidence 0112233345688999999995 556655 35799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1032 TVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1032 ~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
.|++++++|+|||++||++. .+...+|++++|++ |+++..|+..
T Consensus 437 ~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 480 (501)
T PRK10762 437 LINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTRE 480 (501)
T ss_pred HHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccc
Confidence 99999878999999999986 57789999999996 6888888764
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-63 Score=633.08 Aligned_cols=487 Identities=21% Similarity=0.232 Sum_probs=352.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCC----------Ccc-------ccce
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGME----------EFV-------PQRT 229 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~-------~~~~ 229 (1436)
.++|+||||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... ..+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999986431 111 1136
Q ss_pred EEEecCCC--CcCCCCCHHHHHHhhhhhc-CCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHH
Q 046196 230 SAYISQND--LHIGEMTVRETLAFSARCQ-GVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLK 306 (1436)
Q Consensus 230 ~~yv~Q~~--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (1436)
+|||+|++ .+++.+||+||+.++.+.. +.. + .+....++++|+
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------R------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 99999997 5778899999999875431 110 0 011224566789
Q ss_pred HhCCcc---cccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEE
Q 046196 307 ILGLEV---CADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISL 383 (1436)
Q Consensus 307 ~lgL~~---~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i 383 (1436)
.+||++ ..+ +.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.++++.+.. +++||.+
T Consensus 152 ~~gL~~~~~~~~-----~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILS-----RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHh-----CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 234 3445799999999999999999999999999999999999999999999986533 5567778
Q ss_pred ecCchhHHHhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHH
Q 046196 384 LQPAPETYELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEF 463 (1436)
Q Consensus 384 ~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 463 (1436)
+|+..++.++||+|++|++|++++.|+++++.+ -|.+....+++
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~---------------------------- 269 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALL---------------------------- 269 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhh----------------------------
Confidence 999999999999999999999999999876631 01000000000
Q ss_pred HHHHHhchhhhhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Q 046196 464 SEVFQSFHIGQKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLF 543 (1436)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f 543 (1436)
+. .+ .. ...
T Consensus 270 -~~---------------~~--~~----~~~------------------------------------------------- 278 (623)
T PRK10261 270 -AA---------------VP--QL----GAM------------------------------------------------- 278 (623)
T ss_pred -hc---------------cC--cc----ccc-------------------------------------------------
Confidence 00 00 00 000
Q ss_pred hccccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhh
Q 046196 544 LRTEMHRSTVEDGGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVF 623 (1436)
Q Consensus 544 ~~~~~~~~~~~~~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~ 623 (1436)
. ... . |
T Consensus 279 -~---~~~-~----------------------------------------------------------~----------- 284 (623)
T PRK10261 279 -K---GLD-Y----------------------------------------------------------P----------- 284 (623)
T ss_pred -c---ccc-C----------------------------------------------------------C-----------
Confidence 0 000 0 0
Q ss_pred hhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhH
Q 046196 624 MTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWF 703 (1436)
Q Consensus 624 i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 703 (1436)
T Consensus 285 -------------------------------------------------------------------------------- 284 (623)
T PRK10261 285 -------------------------------------------------------------------------------- 284 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHhhhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 046196 704 SPMMYGQNALAVNEFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQ 783 (1436)
Q Consensus 704 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~ 783 (1436)
.......
T Consensus 285 -----------------~~~~~~~-------------------------------------------------------- 291 (623)
T PRK10261 285 -----------------RRFPLIS-------------------------------------------------------- 291 (623)
T ss_pred -----------------ccccccc--------------------------------------------------------
Confidence 0000000
Q ss_pred ccchHHHHhhhhccCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCcc
Q 046196 784 AILSEEALAKKNACKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDR 863 (1436)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1436)
.. ... . .. +.. .. .. .+.....++++|+++.+...... .......
T Consensus 292 --------~~---~~~----~--~~-~~~------~~--~~-------~~~~~~~L~~~~l~~~y~~~~~~--~~~~~~~ 336 (623)
T PRK10261 292 --------LE---HPA----K--QE-PPI------EQ--DT-------VVDGEPILQVRNLVTRFPLRSGL--LNRVTRE 336 (623)
T ss_pred --------cc---ccc----c--cC-ccc------cc--cc-------ccCCCceEEEeeeEEEEcCCCcc--ccccCCc
Confidence 00 000 0 00 000 00 00 00001247888888766321000 0000012
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------cccceEEEeecCC--CC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------TFARISGYCEQTD--IH 935 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~ 935 (1436)
+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|+. .+
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l 414 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASL 414 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhc
Confidence 459999999999999999999999999999999999986 5689999999876321 2345799999986 57
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 046196 936 SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1014 (1436)
Q Consensus 936 ~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illl 1014 (1436)
++.+||.|++.+...... ....++..+.++++++.+||. ...+.. +..|||||||||+|||||+.+|++|||
T Consensus 415 ~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llll 487 (623)
T PRK10261 415 DPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIA 487 (623)
T ss_pred CCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 889999999987643321 112334456788999999996 455554 468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1015 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1015 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||||+|||+.++..+++.|++++++ |.|||++||+++ .+...+|+|++|++ |+++..|+.
T Consensus 488 DEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 488 DEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999999999999999999765 899999999986 57788999999986 789999975
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.9e-63 Score=619.78 Aligned_cols=452 Identities=21% Similarity=0.302 Sum_probs=343.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999998 9999999988754332 2358999999988999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.|+.... . +....++.+++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~-------------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR-------------Q-------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc-------------h-------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853110 0 001234567899999877776554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
.|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++ .+++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA--QGVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 356677789999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcC
Q 046196 403 GQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELAT 482 (1436)
Q Consensus 403 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1436)
|++++.|+++++.+. +.+ +.+.. .
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~----~-------- 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITP----A-------- 239 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhC----c--------
Confidence 999999987664210 000 00000 0
Q ss_pred CCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHH
Q 046196 483 PFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGA 562 (1436)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~ 562 (1436)
... .. ...
T Consensus 240 ----~~~------------------------------------------------------------~~-~~~------- 247 (510)
T PRK15439 240 ----ARE------------------------------------------------------------KS-LSA------- 247 (510)
T ss_pred ----ccc------------------------------------------------------------cc-ccc-------
Confidence 000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHH
Q 046196 563 LFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQY 642 (1436)
Q Consensus 563 lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 642 (1436)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCc
Q 046196 643 FLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKS 722 (1436)
Q Consensus 643 l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 722 (1436)
...
T Consensus 248 --------------------------------------------------~~~--------------------------- 250 (510)
T PRK15439 248 --------------------------------------------------SQK--------------------------- 250 (510)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred cccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCCc
Q 046196 723 WGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEEP 802 (1436)
Q Consensus 723 ~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1436)
.. ..+ + . .
T Consensus 251 ~~-----------------~~~---------------------------------~--------------------~--~ 258 (510)
T PRK15439 251 LW-----------------LEL---------------------------------P--------------------G--N 258 (510)
T ss_pred cc-----------------ccc---------------------------------c--------------------c--c
Confidence 00 000 0 0 0
Q ss_pred ccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEE
Q 046196 803 VELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTAL 882 (1436)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai 882 (1436)
. .. . +..+..++++|++. .+|+|||++|++||++||
T Consensus 259 -~--~~--------------~---------~~~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l 294 (510)
T PRK15439 259 -R--RQ--------------Q---------AAGAPVLTVEDLTG------------------EGFRNISLEVRAGEILGL 294 (510)
T ss_pred -c--cc--------------c---------CCCCceEEEeCCCC------------------CCccceeEEEcCCcEEEE
Confidence 0 00 0 00011366677652 159999999999999999
Q ss_pred EccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCC---CCCCCCcHHHHHHHHHHhcCCC
Q 046196 883 MGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTD---IHSPHVTVYESLVYSAWLRLPP 955 (1436)
Q Consensus 883 ~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~l~~~~ 955 (1436)
+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.|++......+.+.
T Consensus 295 ~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~ 372 (510)
T PRK15439 295 AGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGF 372 (510)
T ss_pred ECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhcc
Confidence 99999999999999999876 5689999999876431 1234689999974 4788899999986421111111
Q ss_pred CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHH
Q 046196 956 EVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1034 (1436)
Q Consensus 956 ~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~ 1034 (1436)
.......++.++++++.+++. +..++. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+
T Consensus 373 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~ 447 (510)
T PRK15439 373 WIKPARENAVLERYRRALNIKFNHAEQA-----ARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIR 447 (510)
T ss_pred ccChHHHHHHHHHHHHHcCCCCCCccCc-----cccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHH
Confidence 111222334578999999996 566665 35799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1035 NTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1035 ~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+++++|.|||+++|+++ .+.+.+|++++|++ |++++.|..
T Consensus 448 ~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~ 487 (510)
T PRK15439 448 SIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTG 487 (510)
T ss_pred HHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 99888999999999986 57788999999985 788887754
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.8e-63 Score=621.69 Aligned_cols=445 Identities=23% Similarity=0.316 Sum_probs=341.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCcceEEEECC-----------------------ccC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKL--GKDLKFSGRVTYNG-----------------------HGM 221 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~ 221 (1436)
+++|+|+|+++.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999996 576 89999972 221
Q ss_pred C-------Cc------cccceEEEecCC-CCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHH
Q 046196 222 E-------EF------VPQRTSAYISQN-DLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIM 287 (1436)
Q Consensus 222 ~-------~~------~~~~~~~yv~Q~-~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 287 (1436)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~----------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------G----------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------H-----------------
Confidence 1 00 013468999997 67788899999999865432210 0
Q ss_pred HHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHH
Q 046196 288 KAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNS 367 (1436)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~ 367 (1436)
.+....++.+++.+||++..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001124566899999987666544 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhh
Q 046196 368 LRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQY 447 (1436)
Q Consensus 368 l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~ 447 (1436)
|+++++.. +++|+.++|+...+.++||+|++|++|++++.|+++++.+.+.. .
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~----------------~---------- 263 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME----------------G---------- 263 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh----------------h----------
Confidence 99986533 55677789999999999999999999999988876543210000 0
Q ss_pred hccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHH
Q 046196 448 WANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFF 527 (1436)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~ 527 (1436)
.
T Consensus 264 --------------------------------~----------------------------------------------- 264 (520)
T TIGR03269 264 --------------------------------V----------------------------------------------- 264 (520)
T ss_pred --------------------------------c-----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhhhccccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHH
Q 046196 528 KMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTW 607 (1436)
Q Consensus 528 ~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~ 607 (1436)
..
T Consensus 265 --------------------------~~---------------------------------------------------- 266 (520)
T TIGR03269 265 --------------------------SE---------------------------------------------------- 266 (520)
T ss_pred --------------------------hh----------------------------------------------------
Confidence 00
Q ss_pred HHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcee
Q 046196 608 ILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFI 687 (1436)
Q Consensus 608 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~ 687 (1436)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHH
Q 046196 688 LSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNF 767 (1436)
Q Consensus 688 i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~ 767 (1436)
+.
T Consensus 267 -----~~------------------------------------------------------------------------- 268 (520)
T TIGR03269 267 -----VE------------------------------------------------------------------------- 268 (520)
T ss_pred -----hc-------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCCCCCccccchHHHHhhhhccCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccce
Q 046196 768 LFTVALKYLDPFGKPQAILSEEALAKKNACKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYA 847 (1436)
Q Consensus 768 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 847 (1436)
. .. . . +.....++++|+++.
T Consensus 269 -------------~----------------~~--~------~-----------------------~~~~~~l~~~~l~~~ 288 (520)
T TIGR03269 269 -------------K----------------EC--E------V-----------------------EVGEPIIKVRNVSKR 288 (520)
T ss_pred -------------c----------------cc--c------c-----------------------CCCCceEEEeccEEE
Confidence 0 00 0 0 000013667777766
Q ss_pred eecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEEC-Ccc---CCc----
Q 046196 848 LDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITIS-GYP---KNQ---- 919 (1436)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~---- 919 (1436)
++.. ..+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ +..
T Consensus 289 ~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 289 YISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchh
Confidence 5210 0112459999999999999999999999999999999999986 568999996 532 111
Q ss_pred --ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCC
Q 046196 920 --ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-----IREALVGLPGVSGLS 992 (1436)
Q Consensus 920 --~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-----~~~~~~g~~~~~~LS 992 (1436)
...++.+||++|++.+++.+||.|++.+...+. ...+..++.++++++.+++.+ ..++. +..||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LS 429 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELS 429 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCC
Confidence 122456899999988889999999998754321 122333456788999999975 33443 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
|||||||+||+||+.+|++|+|||||+|||+.+...+++.|++++++ |.|||++||+++ .+.+.+|++++|++ |+++
T Consensus 430 gGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~ 507 (520)
T TIGR03269 430 EGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIV 507 (520)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999986 6888
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 508 ~~g~~ 512 (520)
T TIGR03269 508 KIGDP 512 (520)
T ss_pred EECCH
Confidence 88864
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.1e-63 Score=619.98 Aligned_cols=464 Identities=23% Similarity=0.295 Sum_probs=344.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCccc-------cceEEEecCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEFVP-------QRTSAYISQND 237 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~ 237 (1436)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 459999999999999999999999999999999999998620 128999999998754321 24699999996
Q ss_pred C--cCCCCCHHHHHHhhhhhc-CCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccc-
Q 046196 238 L--HIGEMTVRETLAFSARCQ-GVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVC- 313 (1436)
Q Consensus 238 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 313 (1436)
. +.+.+||+|++.+..... +.. + .+....++.+++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987653211 100 0 0112345677899999752
Q ss_pred --ccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHH
Q 046196 314 --ADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETY 391 (1436)
Q Consensus 314 --~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 391 (1436)
.+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+.+||.++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 3544 4569999999999999999999999999999999999999999999998653 2456667899999999
Q ss_pred HhcccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhch
Q 046196 392 ELFDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFH 471 (1436)
Q Consensus 392 ~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1436)
.+||+|++|++|++++.|+++++.+. |.. ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~-------- 252 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PY-------- 252 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HH--------
Confidence 99999999999999999987665210 000 00
Q ss_pred hhhhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcc
Q 046196 472 IGQKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRS 551 (1436)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~ 551 (1436)
.+.+ +...
T Consensus 253 ----------------------------------------~~~~----------------------------~~~~---- 260 (529)
T PRK15134 253 ----------------------------------------TQKL----------------------------LNSE---- 260 (529)
T ss_pred ----------------------------------------HHHH----------------------------HHhC----
Confidence 0000 0000
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccc
Q 046196 552 TVEDGGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGF 631 (1436)
Q Consensus 552 ~~~~~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~ 631 (1436)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHH
Q 046196 632 ESNIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQN 711 (1436)
Q Consensus 632 ~~~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~ 711 (1436)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHH
Q 046196 712 ALAVNEFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEAL 791 (1436)
Q Consensus 712 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~ 791 (1436)
+. . .+
T Consensus 261 ---------------~~------~-----------------------------------------~~------------- 265 (529)
T PRK15134 261 ---------------PS------G-----------------------------------------DP------------- 265 (529)
T ss_pred ---------------cc------c-----------------------------------------cc-------------
Confidence 00 0 00
Q ss_pred hhhhccCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccce
Q 046196 792 AKKNACKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVS 871 (1436)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 871 (1436)
...+ +..+..++++|+++.+....+ ..+...+.+.+|+|||
T Consensus 266 ---------------~~~~----------------------~~~~~~l~~~~l~~~~~~~~~--~~~~~~~~~~il~~is 306 (529)
T PRK15134 266 ---------------VPLP----------------------EPASPLLDVEQLQVAFPIRKG--ILKRTVDHNVVVKNIS 306 (529)
T ss_pred ---------------cccC----------------------CCCCCcccccCcEEEeecCcc--ccccccccceeeecce
Confidence 0000 000012455666554421000 0000001245999999
Q ss_pred EEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------cccceEEEeecCC--CCCCCCcHHH
Q 046196 872 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------TFARISGYCEQTD--IHSPHVTVYE 943 (1436)
Q Consensus 872 ~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~lTv~e 943 (1436)
|+|++||++||+||||||||||+++|+|..+ .+|+|+++|.++... .+++.+||++|+. .+++.+||.|
T Consensus 307 l~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e 383 (529)
T PRK15134 307 FTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQ 383 (529)
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHH
Confidence 9999999999999999999999999999873 589999999875321 1245689999986 4778899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 944 SLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 944 ~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
++.+....+.. ..+..+.++.++++++.+++. ...+.. +..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 384 ~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 457 (529)
T PRK15134 384 IIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLD 457 (529)
T ss_pred HHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccC
Confidence 99886533211 122333445688999999996 355554 45799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1023 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.++..+++.|++++++ |+|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 458 ~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 458 KTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 99999999999999865 899999999976 57788999999996 688888874
No 28
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-62 Score=672.81 Aligned_cols=211 Identities=24% Similarity=0.290 Sum_probs=176.2
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..|+|+|++++++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999988741 22359999999999999999999999999999999999987 578999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+.. ..+++.++||||++.++.. |++|||... ...++ +.+.++++..++.+. .|+.+|.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~sd----eeI~~Al~~a~l~~~I~~lp~Gldt~vge- 1441 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEASS----AEVWAALELVGLRERVASESEGIDSRVLE- 1441 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCCH----HHHHHHHHHCCChHHHhhCcccccccccC-
Confidence 753 4577889999999998864 999999521 12222 236777777777543 3455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 987 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~-p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
++.+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+|++|+
T Consensus 1442 ~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1442 GGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 3468999999999999999996 89999999999999999999999999864 4799999999964 677899999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 799999975
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-63 Score=614.75 Aligned_cols=451 Identities=21% Similarity=0.309 Sum_probs=342.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999987 9999999988753321 3569999999988999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++......+. ... .+....++.+++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------VNR------------------------RLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCC-------CCH------------------------HHHHHHHHHHHHHcCCCCCcCCch----
Confidence 999999998632100000 000 001123456789999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ .+++|+.++|+..++..+||+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA--EGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999854 356677789999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhcC
Q 046196 403 GQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELAT 482 (1436)
Q Consensus 403 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1436)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999865421100 000000000
Q ss_pred CCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhHH
Q 046196 483 PFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMGA 562 (1436)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g~ 562 (1436)
+ ..
T Consensus 237 --------------------------------~----------------------------~~----------------- 239 (501)
T PRK11288 237 --------------------------------M----------------------------VG----------------- 239 (501)
T ss_pred --------------------------------h----------------------------cC-----------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHHH
Q 046196 563 LFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQY 642 (1436)
Q Consensus 563 lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 642 (1436)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK11288 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCCc
Q 046196 643 FLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGKS 722 (1436)
Q Consensus 643 l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 722 (1436)
..
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK11288 240 ------------------------------------------------------------------------------RE 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCCc
Q 046196 723 WGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEEP 802 (1436)
Q Consensus 723 ~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1436)
.. .. .. .
T Consensus 242 ~~----------------------~~-------------------------------------------------~~--~ 248 (501)
T PRK11288 242 IG----------------------DI-------------------------------------------------YG--Y 248 (501)
T ss_pred cc----------------------cc-------------------------------------------------cc--c
Confidence 00 00 00 0
Q ss_pred ccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEE
Q 046196 803 VELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTAL 882 (1436)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai 882 (1436)
.+. +..+..++++|+++. .+++|+|++|++||++||
T Consensus 249 ------~~~---------------------~~~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~~~i 284 (501)
T PRK11288 249 ------RPR---------------------PLGEVRLRLDGLKGP-----------------GLREPISFSVRAGEIVGL 284 (501)
T ss_pred ------ccc---------------------CCCCcEEEEeccccC-----------------CcccceeEEEeCCcEEEE
Confidence 000 000113566666521 389999999999999999
Q ss_pred EccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc----ccccceEEEeecCC---CCCCCCcHHHHHHHHHHhcC-C
Q 046196 883 MGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ----ETFARISGYCEQTD---IHSPHVTVYESLVYSAWLRL-P 954 (1436)
Q Consensus 883 ~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~l~~-~ 954 (1436)
+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|+. .+++.+|+.|++.+...... +
T Consensus 285 iG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~ 362 (501)
T PRK11288 285 FGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLR 362 (501)
T ss_pred EcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcc
Confidence 99999999999999999986 568999999987532 12245689999985 47889999999986532110 0
Q ss_pred CC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHH
Q 046196 955 PE--VDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1031 (1436)
Q Consensus 955 ~~--~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~ 1031 (1436)
.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++
T Consensus 363 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~ 437 (501)
T PRK11288 363 AGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYN 437 (501)
T ss_pred cccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHH
Confidence 01 11222335678899999994 5666653 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 046196 1032 TVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGR 1078 (1436)
Q Consensus 1032 ~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~ 1078 (1436)
.|++++++|.|||++|||++ .+.+.+|++++|++ |++++.|..++
T Consensus 438 ~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 438 VIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 99999888999999999986 57789999999996 68999987654
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.3e-62 Score=614.44 Aligned_cols=457 Identities=19% Similarity=0.270 Sum_probs=343.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCcceEEEECCccCCCccc----cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK--DLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 240 (1436)
+++|+|||+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++|++|++.++
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 4599999999999999999999999999999999999876 4 8999999988765332 24699999999889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccc-ccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCA-DTMVG 319 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg 319 (1436)
+.+||+||+.++.......... .. .+....++.+++.+||++.. ++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 139 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGRM------AY------------------------NAMYLRAKNLLRELQLDADNVTRPV- 139 (500)
T ss_pred CCCcHHHHHHhhcccccccccc------CH------------------------HHHHHHHHHHHHHcCCCCCcccCch-
Confidence 9999999998864321000000 00 00112356688999997654 3334
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++. .+++|+.++|+..++.++||+|++
T Consensus 140 ----~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~~~~~~d~i~~ 213 (500)
T TIGR02633 140 ----GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNEVKAVCDTICV 213 (500)
T ss_pred ----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHHHHHhCCEEEE
Confidence 46999999999999999999999999999999999999999999999864 356677789999999999999999
Q ss_pred ecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhh
Q 046196 400 LSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDE 479 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1436)
|++|++++.|+.+++.. .+..+
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~-------------- 235 (500)
T TIGR02633 214 IRDGQHVATKDMSTMSE--------------------------------------------DDIIT-------------- 235 (500)
T ss_pred EeCCeEeeecCcccCCH--------------------------------------------HHHHH--------------
Confidence 99999987664321100 00000
Q ss_pred hcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchh
Q 046196 480 LATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIY 559 (1436)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~ 559 (1436)
.+ .
T Consensus 236 ----------------------------------~~----------------------------~--------------- 238 (500)
T TIGR02633 236 ----------------------------------MM----------------------------V--------------- 238 (500)
T ss_pred ----------------------------------HH----------------------------h---------------
Confidence 00 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHH
Q 046196 560 MGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFV 639 (1436)
Q Consensus 560 ~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 639 (1436)
+.
T Consensus 239 ----------------------------------------------------------------------~~-------- 240 (500)
T TIGR02633 239 ----------------------------------------------------------------------GR-------- 240 (500)
T ss_pred ----------------------------------------------------------------------Cc--------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhc
Q 046196 640 KQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFL 719 (1436)
Q Consensus 640 ~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~ 719 (1436)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T TIGR02633 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCC
Q 046196 720 GKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKT 799 (1436)
Q Consensus 720 ~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 799 (1436)
. ... . . + .
T Consensus 241 --~---~~~---------------~-------------------------------~-~--------------------~ 248 (500)
T TIGR02633 241 --E---ITS---------------L-------------------------------Y-P--------------------H 248 (500)
T ss_pred --c---ccc---------------c-------------------------------c-c--------------------c
Confidence 0 000 0 0 0 0
Q ss_pred CCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeE
Q 046196 800 EEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVL 879 (1436)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 879 (1436)
. . . . .....++++|+++.+.. .+++.+|+|+||+|++||+
T Consensus 249 ----~---~--~-----------~----------~~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~ 288 (500)
T TIGR02633 249 ----E---P--H-----------E----------IGDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEI 288 (500)
T ss_pred ----c---c--c-----------C----------CCCceEEEeCCcccccc----------cccccccccceeEEeCCcE
Confidence 0 0 0 0 00013667777654310 0123589999999999999
Q ss_pred EEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc----ccccceEEEeecCC---CCCCCCcHHHHHHHHHHhc
Q 046196 880 TALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ----ETFARISGYCEQTD---IHSPHVTVYESLVYSAWLR 952 (1436)
Q Consensus 880 ~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~l~ 952 (1436)
+||+|||||||||||++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.+...-.
T Consensus 289 ~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~ 367 (500)
T TIGR02633 289 LGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKS 367 (500)
T ss_pred EEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhh
Confidence 999999999999999999999762 258999999987642 12345689999985 4788999999998753211
Q ss_pred CC--CCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHH
Q 046196 953 LP--PEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1029 (1436)
Q Consensus 953 ~~--~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i 1029 (1436)
.. ........++.++++++.+++.+ ..++. +..||||||||++||++|+.+|++|+|||||+|||+.++..+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l 442 (500)
T TIGR02633 368 FCFKMRIDAAAELQIIGSAIQRLKVKTASPFLP-----IGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEI 442 (500)
T ss_pred hccCCcCCHHHHHHHHHHHHHhcCccCCCccCc-----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHH
Confidence 10 01122333456789999999964 45554 357999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1030 MRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1030 ~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
++.|++++++|.|||++|||++ .+.+.+|++++|++ |+++..++.
T Consensus 443 ~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 443 YKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred HHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999999888999999999986 57788999999986 678877754
No 31
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.5e-61 Score=660.42 Aligned_cols=210 Identities=20% Similarity=0.264 Sum_probs=174.9
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++++++. +.+.+|+|||++|+|||++||+|+||||||||+++|+|..+ .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999988742 22469999999999999999999999999999999999874 48999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+.. ..+++.++|+||++.+++. |+||||.... ..++ +.+.++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~td----eei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QWSD----EEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CCCH----HHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 4567889999999999875 9999995311 1222 235777887777543 3444543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
++.+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346799999999999999999999999999999999999999999999875 4799999999964 5677999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 789988875
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-61 Score=601.71 Aligned_cols=449 Identities=18% Similarity=0.285 Sum_probs=340.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999987 9999999998754321 3569999999888999
Q ss_pred CCHHHHHHhhhh-hcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 243 MTVRETLAFSAR-CQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 243 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
+||+||+.++.. ..+... .. .+....++.+++.+||++..++.+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFV--------DQ------------------------DKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhccccccccccc--------CH------------------------HHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999988632 100000 00 001123456788999987766555
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
..|||||||||+||+||+.+|++|||||||+|||+.+..++.+.|+++++ .+.+|+.++|+..++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45999999999999999999999999999999999999999999999864 35566678999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhc
Q 046196 402 DGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELA 481 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1436)
+|+++..|+++++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876543200 000000
Q ss_pred CCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhH
Q 046196 482 TPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMG 561 (1436)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g 561 (1436)
+ .. . .
T Consensus 230 ---------------------------------~----------------------------~~----~----~------ 234 (491)
T PRK10982 230 ---------------------------------M----------------------------VG----R----S------ 234 (491)
T ss_pred ---------------------------------H----------------------------hC----C----C------
Confidence 0 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHH
Q 046196 562 ALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQ 641 (1436)
Q Consensus 562 ~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 641 (1436)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCC
Q 046196 642 YFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGK 721 (1436)
Q Consensus 642 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 721 (1436)
+
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCC
Q 046196 722 SWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEE 801 (1436)
Q Consensus 722 ~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1436)
. ...
T Consensus 236 -----~-------------------------------------------------~~~---------------------- 239 (491)
T PRK10982 236 -----T-------------------------------------------------QRF---------------------- 239 (491)
T ss_pred -----c-------------------------------------------------ccc----------------------
Confidence 0 000
Q ss_pred cccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEE
Q 046196 802 PVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTA 881 (1436)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 881 (1436)
+ . +. . . + .+..++++|+++.. +.+|+|||+.+++||++|
T Consensus 240 ~----~--~~------~----~---------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~ 278 (491)
T PRK10982 240 P----D--KE------N----K---------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILG 278 (491)
T ss_pred c----c--cc------C----C---------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEE
Confidence 0 0 00 0 0 0 01146778877641 238999999999999999
Q ss_pred EEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCC---CCCCCCcHHHHHHHHHH--h-
Q 046196 882 LMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTD---IHSPHVTVYESLVYSAW--L- 951 (1436)
Q Consensus 882 i~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~~~~~--l- 951 (1436)
|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.++..+... .
T Consensus 279 l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (491)
T PRK10982 279 IAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYK 356 (491)
T ss_pred EecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhc
Confidence 999999999999999999986 5689999999876431 1234589999985 36788888877433211 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHH
Q 046196 952 RLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1030 (1436)
Q Consensus 952 ~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~ 1030 (1436)
...........++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+|||||+|||+.++..++
T Consensus 357 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~ 431 (491)
T PRK10982 357 NKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIY 431 (491)
T ss_pred ccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHH
Confidence 1000012223345678889999885 344554 4579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1031 RTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1031 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.|+++.++|+|||++||+++ ++...+|++++|++ |+++..++.
T Consensus 432 ~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 432 QLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred HHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 999999888999999999986 57789999999986 688776654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.3e-60 Score=594.79 Aligned_cols=446 Identities=20% Similarity=0.261 Sum_probs=327.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCc--C--
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLH--I-- 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~--~-- 240 (1436)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4899999999999999999999999999999999999997 9999999976643221 2458999998532 1
Q ss_pred ----CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 241 ----GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 241 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
..+||+|++.++. +....++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764320 001234567889999877776
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
.++ .|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++ .+.+|+.++|+..++.+.||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ--SGITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCeEEEEeCCHHHHHhhCCE
Confidence 654 5999999999999999999999999999999999999999999999865 355666688999999999999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhh
Q 046196 397 LILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKL 476 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1436)
|++|++|+++.+|+++++.+. +.+..+ ..
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~----------------------------~~-------- 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQL----------------------------AH-------- 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhhh----------------------------hh--------
Confidence 999999999999987654210 000000 00
Q ss_pred hhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCccccccc
Q 046196 477 GDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDG 556 (1436)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~ 556 (1436)
+ + . ...
T Consensus 234 ------------------------------------~------~------------------------------~-~~~- 239 (490)
T PRK10938 234 ------------------------------------S------E------------------------------Q-LEG- 239 (490)
T ss_pred ------------------------------------h------h------------------------------c-cCc-
Confidence 0 0 0 000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHH
Q 046196 557 GIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIE 636 (1436)
Q Consensus 557 ~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 636 (1436)
.
T Consensus 240 --------------------------------------------------------------------------~----- 240 (490)
T PRK10938 240 --------------------------------------------------------------------------V----- 240 (490)
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHh
Q 046196 637 RFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVN 716 (1436)
Q Consensus 637 ~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 716 (1436)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhc
Q 046196 717 EFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNA 796 (1436)
Q Consensus 717 ef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 796 (1436)
. .+..
T Consensus 241 -------~-~~~~------------------------------------------------------------------- 245 (490)
T PRK10938 241 -------Q-LPEP------------------------------------------------------------------- 245 (490)
T ss_pred -------c-cCcc-------------------------------------------------------------------
Confidence 0 0000
Q ss_pred cCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeC
Q 046196 797 CKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRP 876 (1436)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 876 (1436)
. + ...+. . . +.....++++|+++.++ ++.+|+|+||++++
T Consensus 246 --~----~--~~~~~-----------~--~------~~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~ 285 (490)
T PRK10938 246 --D----E--PSARH-----------A--L------PANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNP 285 (490)
T ss_pred --c----c--ccccc-----------c--c------CCCCceEEEeceEEEEC-------------CeeEEeeceEEEcC
Confidence 0 0 00000 0 0 00012478888877652 23589999999999
Q ss_pred CeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc----ccccceEEEeecCCCCCC--CCcHHHHHHHHHH
Q 046196 877 GVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ----ETFARISGYCEQTDIHSP--HVTVYESLVYSAW 950 (1436)
Q Consensus 877 Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~--~lTv~e~l~~~~~ 950 (1436)
||+++|+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|++.+++ ..|+++++.+...
T Consensus 286 Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~ 364 (490)
T PRK10938 286 GEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFF 364 (490)
T ss_pred CCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccc
Confidence 999999999999999999999997531 248999999976422 123456899999875543 3567766654321
Q ss_pred h--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 046196 951 L--RLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1027 (1436)
Q Consensus 951 l--~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~ 1027 (1436)
. ....... .+.++.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++.
T Consensus 365 ~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~ 438 (490)
T PRK10938 365 DSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----FHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQ 438 (490)
T ss_pred cccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHH
Confidence 1 1111111 223456789999999986 66655 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCC-CEEEEEecCCCHHHHH-hhCeEEEEecCcEEEEE
Q 046196 1028 IVMRTVRNTVDTG-RTVVCTIHQPSIDIFD-AFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 1028 ~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~D~v~~l~~Gg~~~y~ 1073 (1436)
.+++.|++++++| .|||++||+++ ++.+ .+|++++|++ |+++..
T Consensus 439 ~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 439 LVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999999998776 47999999976 4555 5899999997 555443
No 34
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.7e-59 Score=585.32 Aligned_cols=201 Identities=21% Similarity=0.302 Sum_probs=163.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488899887652 2459999999999999999999999999999999999876 56899999542
Q ss_pred CcccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 046196 918 NQETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGq 995 (1436)
..+||++|+. .+++.+||+|++.+...... .... ...++++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 67889999999987642221 1111 122457899999964 34544 45799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE-EEc
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI-YVG 1074 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-y~G 1074 (1436)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||++||+++ .+...+|++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999976 5777899999998767765 555
Q ss_pred C
Q 046196 1075 P 1075 (1436)
Q Consensus 1075 ~ 1075 (1436)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3e-58 Score=512.00 Aligned_cols=471 Identities=24% Similarity=0.328 Sum_probs=362.1
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCcceEEEECCccCCCcccc-------ceEEEecC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK--DLKFSGRVTYNGHGMEEFVPQ-------RTSAYISQ 235 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 235 (1436)
....+++||||.|++||.+||+|.||||||-..+.++|+++. ....+|+|.|+|.++-....+ ..|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 345699999999999999999999999999999999999975 345689999999987544322 36999999
Q ss_pred CC--CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccc
Q 046196 236 ND--LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVC 313 (1436)
Q Consensus 236 ~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 313 (1436)
++ .+-|-.|+...|.-..++.. .+.+.....++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hr---------------------------------g~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHR---------------------------------GLSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHh---------------------------------cccHHHHHHHHHHHHHHcCCCch
Confidence 96 44555566666654443321 01112233456678999999886
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHh
Q 046196 314 ADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYEL 393 (1436)
Q Consensus 314 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 393 (1436)
...+ +.+++.|||||||||.||.||+.+|++|+-||||++||.....+|++.|+++.... +..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5544 57889999999999999999999999999999999999999999999999997654 67788899999999999
Q ss_pred cccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhh
Q 046196 394 FDDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIG 473 (1436)
Q Consensus 394 ~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1436)
+|+|+||.+|+|+++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999877632 1211 000
Q ss_pred hhhhhhhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccc
Q 046196 474 QKLGDELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTV 553 (1436)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~ 553 (1436)
|.++. .
T Consensus 255 ---------------------------------------r~Ll~----------------------------a------- 260 (534)
T COG4172 255 ---------------------------------------RKLLA----------------------------A------- 260 (534)
T ss_pred ---------------------------------------HHHHh----------------------------c-------
Confidence 00000 0
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccc
Q 046196 554 EDGGIYMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFES 633 (1436)
Q Consensus 554 ~~~~~~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 633 (1436)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHH
Q 046196 634 NIERFVKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNAL 713 (1436)
Q Consensus 634 ~~~~f~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 713 (1436)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhh
Q 046196 714 AVNEFLGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAK 793 (1436)
Q Consensus 714 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 793 (1436)
.|.+.
T Consensus 261 ------------eP~g~--------------------------------------------------------------- 265 (534)
T COG4172 261 ------------EPSGD--------------------------------------------------------------- 265 (534)
T ss_pred ------------CCCCC---------------------------------------------------------------
Confidence 00000
Q ss_pred hhccCCCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEE
Q 046196 794 KNACKTEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGA 873 (1436)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 873 (1436)
+ ...+ +..+..++.+|++..++.+...-. ...+...++++||++
T Consensus 266 --------~----~p~~----------------------~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl~ 309 (534)
T COG4172 266 --------P----PPLP----------------------EDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISLT 309 (534)
T ss_pred --------C----CCCC----------------------CCCCceEEecceEEEEecCCcccc--ccchheEEeccceeE
Confidence 0 0000 001123444444443333221100 011234689999999
Q ss_pred EeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------cccceEEEeecCC--CCCCCCcHHHHH
Q 046196 874 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------TFARISGYCEQTD--IHSPHVTVYESL 945 (1436)
Q Consensus 874 i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l 945 (1436)
+++||.+||+|.||||||||-.+|.++.. .+|+|.++|.++... .+++.+-.|+||+ .+.|.+||.+-+
T Consensus 310 L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII 386 (534)
T COG4172 310 LRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQII 386 (534)
T ss_pred ecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHh
Confidence 99999999999999999999999999876 369999999987532 3567788999997 478999999988
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHH
Q 046196 946 VYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1025 (1436)
Q Consensus 946 ~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~ 1025 (1436)
.=+.....| ..+..++.+++.++++.+||.+-. ... .+.++|||||||++|||||+.+|++++||||||.||-.-
T Consensus 387 ~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~--r~R--YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 387 EEGLRVHEP-KLSAAERDQRVIEALEEVGLDPAT--RNR--YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhH--hhc--CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 777666544 456788999999999999998632 211 357899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1026 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1026 ~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.+|+++|+++.++ |.+-++++||.. -+-.+||+|+||.+ |+++..||.
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 99999999999754 899999999976 46779999999996 799999985
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-58 Score=575.71 Aligned_cols=198 Identities=18% Similarity=0.273 Sum_probs=163.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999887652 2358999999999999999999999999999999999876 56899999873
Q ss_pred CcccccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 046196 918 NQETFARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgG 994 (1436)
+.+||++|+.. +++.+||+|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 556799999986421 11 1 1123468899999984 455554 4579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE-EE
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI-YV 1073 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-y~ 1073 (1436)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++||+++ .+...+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999976 57778999999997 5665 77
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.2e-58 Score=579.73 Aligned_cols=201 Identities=19% Similarity=0.282 Sum_probs=163.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 478889887652 2459999999999999999999999999999999999876 56899999542
Q ss_pred CcccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 046196 918 NQETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGq 995 (1436)
..+||++|+. .+++.+||.|++.+...... .... ...++++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999987642211 1111 123457899999864 34554 35799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE-EEc
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI-YVG 1074 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-y~G 1074 (1436)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||++||++. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999976 4677899999998766765 545
Q ss_pred C
Q 046196 1075 P 1075 (1436)
Q Consensus 1075 ~ 1075 (1436)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-55 Score=558.44 Aligned_cols=197 Identities=22% Similarity=0.328 Sum_probs=160.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899887652 2459999999999999999999999999999999999886 56899999742
Q ss_pred CcccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 046196 918 NQETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTE 994 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgG 994 (1436)
..+||++|+. .+.+..|+.+++.. . .. ......+.++++.+++.. ..+.. +..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~-----~~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEE-----TRRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCc-----hhhCCHH
Confidence 2589999974 34566778776531 1 11 112345788999999963 45554 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE-EE
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI-YV 1073 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-y~ 1073 (1436)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999976 47778999999996 5665 88
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.3e-56 Score=555.24 Aligned_cols=211 Identities=21% Similarity=0.266 Sum_probs=171.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ +. .|+++|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------DF-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------CE-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 477888876542 12 4899999999999999999999999999999999987 568999886
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.+++.+..++. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998888899999999864211 111 12468899999998777765 4579999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | +....|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999976 4677899999996 3 66666653
Q ss_pred Ccc---hhHHHHHhhhC
Q 046196 1077 GRH---CSQLIKYFEGI 1090 (1436)
Q Consensus 1077 ~~~---~~~~~~yf~~~ 1090 (1436)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 221 12345566665
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-54 Score=553.73 Aligned_cols=202 Identities=24% Similarity=0.336 Sum_probs=163.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478889887652 2459999999999999999999999999999999999876 56899998 4321
Q ss_pred CcccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 046196 918 NQETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGq 995 (1436)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++. +..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 5788999999998653210 111 1123467888888885 344554 35799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe-cCcEEEEEc
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK-RGGEEIYVG 1074 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-~Gg~~~y~G 1074 (1436)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...+|++++|. +|+-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999886 459999999975 4677899999997 555556767
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
.-
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-54 Score=511.83 Aligned_cols=449 Identities=22% Similarity=0.359 Sum_probs=350.5
Q ss_pred CCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc----ceEEEecCCCCc
Q 046196 164 KKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ----RTSAYISQNDLH 239 (1436)
Q Consensus 164 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~~~~ 239 (1436)
....++|+||||++++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....+. .-++.|.|+..+
T Consensus 18 FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L 94 (500)
T COG1129 18 FGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSL 94 (500)
T ss_pred cCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhc
Confidence 34567999999999999999999999999999999999999998 99999999988765553 358999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
.|++||.|||.++.+...... . + ........+..+|+.+|++...++.||
T Consensus 95 ~p~LsVaeNifLgre~~~~~g---~---i------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 95 VPNLSVAENIFLGREPTRRFG---L---I------------------------DRKAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred cCCccHHHHhhcccccccCCC---c---c------------------------CHHHHHHHHHHHHHHcCCCCChhhhhh
Confidence 999999999988755322100 0 0 001122345668999999755788887
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+ ||+||||-|.||||+..++++++||||||+|+...+.++++.++++.. +|..||.++|..+|++++||+|.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEE
Confidence 5 999999999999999999999999999999999999999999999864 678888899999999999999999
Q ss_pred ecCCeEEEecCh-hHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhh
Q 046196 400 LSDGQIVYQGPR-ENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGD 478 (1436)
Q Consensus 400 L~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1436)
|.||+++..++. .++- .++..+
T Consensus 218 lRDG~~v~~~~~~~~~~--------------------------------------------~~~lv~------------- 240 (500)
T COG1129 218 LRDGRVVGTRPTAAETS--------------------------------------------EDELVR------------- 240 (500)
T ss_pred EeCCEEeeecccccCCC--------------------------------------------HHHHHH-------------
Confidence 999999876652 2110 000000
Q ss_pred hhcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccch
Q 046196 479 ELATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGI 558 (1436)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~ 558 (1436)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHH
Q 046196 559 YMGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERF 638 (1436)
Q Consensus 559 ~~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 638 (1436)
.|+|=
T Consensus 241 --------------------------------------------------------------------~MvGr------- 245 (500)
T COG1129 241 --------------------------------------------------------------------LMVGR------- 245 (500)
T ss_pred --------------------------------------------------------------------HhhCc-------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhh
Q 046196 639 VKQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEF 718 (1436)
Q Consensus 639 ~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef 718 (1436)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccC
Q 046196 719 LGKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACK 798 (1436)
Q Consensus 719 ~~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 798 (1436)
.... .|
T Consensus 246 ---~~~~------------------------------------------------~~----------------------- 251 (500)
T COG1129 246 ---ELED------------------------------------------------LF----------------------- 251 (500)
T ss_pred ---chhh------------------------------------------------hc-----------------------
Confidence 0000 00
Q ss_pred CCCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCe
Q 046196 799 TEEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGV 878 (1436)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 878 (1436)
+ . +. . . ...+..+++++++.. ..++||||++++||
T Consensus 252 ---~----~--~~--------------~-~----~~~~~~l~v~~l~~~-----------------~~~~dvSf~vr~GE 286 (500)
T COG1129 252 ---P----E--PP--------------E-E----GIGEPVLEVRNLSGG-----------------GKVRDVSFTVRAGE 286 (500)
T ss_pred ---c----c--cc--------------c-c----CCCCcEEEEecCCCC-----------------CceeCceeEEeCCc
Confidence 0 0 00 0 0 001123555555421 15889999999999
Q ss_pred EEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecC---CCCCCCCcHHHHHHHHHHh
Q 046196 879 LTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQT---DIHSPHVTVYESLVYSAWL 951 (1436)
Q Consensus 879 ~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~lTv~e~l~~~~~l 951 (1436)
++||-|-=|||+|-|+++|.|..+ ..+|+|.+||.++... ..+.-++|||.| +-+++.++|.+|+.++...
T Consensus 287 IlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~ 364 (500)
T COG1129 287 ILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLR 364 (500)
T ss_pred EEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhh
Confidence 999999999999999999999655 4689999999986533 244568999986 4578899999999887433
Q ss_pred cCCC--CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHH
Q 046196 952 RLPP--EVDSDTRKMFVEEVMELVELNPIR-EALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1028 (1436)
Q Consensus 952 ~~~~--~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~ 1028 (1436)
+... -.+....++.+++..+.+++.... +.. +..||||++|||.|||.|..+|+||+|||||.|+|..+...
T Consensus 365 ~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~e 439 (500)
T COG1129 365 RFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAE 439 (500)
T ss_pred hhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHH
Confidence 3221 244455566788889998886432 222 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 1029 VMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 1029 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|.++|++++++|++||++|-+.. |+..+||||++|.+ |+++-
T Consensus 440 Iy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 440 IYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred HHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 99999999999999999999985 79999999999996 67655
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.8e-53 Score=537.43 Aligned_cols=200 Identities=19% Similarity=0.262 Sum_probs=157.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 588999987762 12358999999999999999999999999999999999887 56899998752
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~LSgGqr 996 (1436)
..+||++|+. .+.+++.++.........+ ... .+.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 3445666664322111111 111 234678999999973 44443 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE-EEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI-YVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-y~G~ 1075 (1436)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. . .|||++||++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999976 46778999999996 6776 7775
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=510.94 Aligned_cols=499 Identities=24% Similarity=0.283 Sum_probs=339.9
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 244 (1436)
..+++|+|+|+.+.+|+.++|||+|||||||||++|+|.+.|+ +|+|...+ .-+++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 3457999999999999999999999999999999999999998 99999865 236999999999888999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcH---HHH-HHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDI---DLI-MKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~-~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
|.+.+.-+... .++...+...... ..++++. +.+ .....+++...+.+++.+|..||++.. ++.++
T Consensus 83 v~~~v~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~- 152 (530)
T COG0488 83 VLDYVIEGFGE-----LRELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS- 152 (530)
T ss_pred HHHHHHhhhHH-----HHHHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh-
Confidence 99999876431 1222222211111 1122211 111 122333445566788889999999877 66665
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+||||||.||+||++|+.+|++|||||||++||..+..++.+.|++. .+ ++|+++|++...-+.|++|+-+
T Consensus 153 ----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 153 ----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred ----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 49999999999999999999999999999999999999999999863 35 5666899999999999999999
Q ss_pred cCCeE-EEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhh
Q 046196 401 SDGQI-VYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDE 479 (1436)
Q Consensus 401 ~~G~i-v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1436)
+.|++ .|.|.++...+.-+.. .-++....+.+++. .....++.+.+...
T Consensus 224 d~g~l~~y~Gny~~~~~~r~~~------------~~~~~~~~~~~~~~---------~~~~~~~i~r~~~~--------- 273 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQKAER------------LRQEAAAYEKQQKE---------LAKEQEWIRRGKAA--------- 273 (530)
T ss_pred cCCceeEecCCHHHHHHHHHHH------------HHHHHHHHHHHHHH---------HHHHHHHHHHHHhc---------
Confidence 99977 5788888765422110 00000000000000 00011111111110
Q ss_pred hcCCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchh
Q 046196 480 LATPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIY 559 (1436)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~ 559 (1436)
.+. + .+.+...++ +-.+..
T Consensus 274 --------~~~-----------~--k~a~sr~k~-l~k~~~--------------------------------------- 292 (530)
T COG0488 274 --------ASK-----------A--KKAKSRIKR-LEKLEA--------------------------------------- 292 (530)
T ss_pred --------cch-----------H--HHHHHHHHH-HHHHHh---------------------------------------
Confidence 000 0 000000000 000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHH
Q 046196 560 MGALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFV 639 (1436)
Q Consensus 560 ~g~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 639 (1436)
...
T Consensus 293 -------------------------~~~---------------------------------------------------- 295 (530)
T COG0488 293 -------------------------RLA---------------------------------------------------- 295 (530)
T ss_pred -------------------------hhh----------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhc
Q 046196 640 KQYFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFL 719 (1436)
Q Consensus 640 ~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~ 719 (1436)
.
T Consensus 296 ---------------------------------------------------------------------------~---- 296 (530)
T COG0488 296 ---------------------------------------------------------------------------E---- 296 (530)
T ss_pred ---------------------------------------------------------------------------h----
Confidence 0
Q ss_pred CCccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCC
Q 046196 720 GKSWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKT 799 (1436)
Q Consensus 720 ~~~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 799 (1436)
..+.. .
T Consensus 297 -----~~~~~---------------------------------------------------------------------~ 302 (530)
T COG0488 297 -----ERPVE---------------------------------------------------------------------E 302 (530)
T ss_pred -----ccccc---------------------------------------------------------------------c
Confidence 00000 0
Q ss_pred CCcccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeE
Q 046196 800 EEPVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVL 879 (1436)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 879 (1436)
. ...... .. . .. .+..+..++++|+++.++ +++.+++++||.|.+|+.
T Consensus 303 ----~--~~~~~~------f~--~-~~-----~~~g~~vl~~~~~~~~y~------------~~~~l~~~~s~~i~~g~r 350 (530)
T COG0488 303 ----G--KPLAFR------FP--P-PG-----KRLGKLVLEFENVSKGYD------------GGRLLLKDLSFRIDRGDR 350 (530)
T ss_pred ----c--ccceee------cc--C-Cc-----ccCCCeeEEEeccccccC------------CCceeecCceEEecCCCE
Confidence 0 000000 00 0 00 001234688999887763 225799999999999999
Q ss_pred EEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCC
Q 046196 880 TALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVD 958 (1436)
Q Consensus 880 ~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~ 958 (1436)
+||+||||+|||||||+|+|... +.+|+|.+.-. -.+||..|+. .+.++.|+.|.+.-.. | ...
T Consensus 351 iaiiG~NG~GKSTLlk~l~g~~~--~~~G~v~~g~~--------v~igyf~Q~~~~l~~~~t~~d~l~~~~----~-~~~ 415 (530)
T COG0488 351 IAIVGPNGAGKSTLLKLLAGELG--PLSGTVKVGET--------VKIGYFDQHRDELDPDKTVLEELSEGF----P-DGD 415 (530)
T ss_pred EEEECCCCCCHHHHHHHHhhhcc--cCCceEEeCCc--------eEEEEEEehhhhcCccCcHHHHHHhhC----c-ccc
Confidence 99999999999999999999876 45899987532 2489999986 4457889999886321 1 111
Q ss_pred HHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHH
Q 046196 959 SDTRKMFVEEVMELVELNPIR-EALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV 1037 (1436)
Q Consensus 959 ~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~ 1037 (1436)
...+...+..+++..-. .+. ++.||||||.||.+|+.++.+|.+|+|||||++||..+...+.+.|.+.
T Consensus 416 ----e~~~r~~L~~f~F~~~~~~~~-----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f- 485 (530)
T COG0488 416 ----EQEVRAYLGRFGFTGEDQEKP-----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF- 485 (530)
T ss_pred ----HHHHHHHHHHcCCChHHHhCc-----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC-
Confidence 34467888999887532 222 5679999999999999999999999999999999999999999999886
Q ss_pred hCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 1038 DTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 1038 ~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
..|||+||||... +-..+++++.+.+ +-..|.|.
T Consensus 486 --~Gtvl~VSHDr~F-l~~va~~i~~~~~-~~~~~~g~ 519 (530)
T COG0488 486 --EGTVLLVSHDRYF-LDRVATRIWLVED-KVEEFEGG 519 (530)
T ss_pred --CCeEEEEeCCHHH-HHhhcceEEEEcC-ceeEcCCC
Confidence 5699999999763 6678999999986 44455564
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.8e-50 Score=466.45 Aligned_cols=457 Identities=22% Similarity=0.301 Sum_probs=356.3
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc----ceEEEecCCCCcCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ----RTSAYISQNDLHIG 241 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~~~~~~ 241 (1436)
...+++|||++|++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|. .-||.|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 577999999999999999999999999999999999999999 99999999988765554 35899999999999
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
++||.|||..+.+-... .+ +. .......++.+.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------~~------------------------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------ID------------------------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------cC------------------------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999998643210 00 00 011223466788999999988888876
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|++++. .|.+||.++|-..|+.+.||++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999875 46677779999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCchhhhhhhccCCCCCccCCHHHHHHHHHhchhhhhhhhhhc
Q 046196 402 DGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFVTAKEFSEVFQSFHIGQKLGDELA 481 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1436)
.|+++..-++ .. ..+.+++++.
T Consensus 215 ~Gkvvgt~~~--~~-----------------------------------------~~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--VA-----------------------------------------ETTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--CC-----------------------------------------CCCHHHHHHH---------------
Confidence 9998643211 00 0000000000
Q ss_pred CCCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhccccCcccccccchhhH
Q 046196 482 TPFDKSKSHPAALTTKKYGASKKELLKACFAREYLLMKRNSFVYFFKMFQIFFSASVAMTLFLRTEMHRSTVEDGGIYMG 561 (1436)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~t~f~~~~~~~~~~~~~~~~~g 561 (1436)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHhhcccccchhhhHHHHHHHHhhHHHHHHHHHhhhhhhhccccccHHHHHHH
Q 046196 562 ALFFAVITIMFNGFSELSMTIMKLPVFYKQRDFLFFPAWAYSLPTWILKIPITFIEVGIWVFMTYYVVGFESNIERFVKQ 641 (1436)
Q Consensus 562 ~lff~v~~~~~~~~~~~~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 641 (1436)
|+|=
T Consensus 237 ------------------------------------------------------------------MvG~---------- 240 (501)
T COG3845 237 ------------------------------------------------------------------MVGR---------- 240 (501)
T ss_pred ------------------------------------------------------------------hcCC----------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhceeeccCchhhHHHHHHhHcHHHHHHHHHHHhhhcCC
Q 046196 642 YFLLLCVNQTASGLFRLMGALGRNIIVANTFGSFANLTVLVLGGFILSRDDVKKWWLWGYWFSPMMYGQNALAVNEFLGK 721 (1436)
Q Consensus 642 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 721 (1436)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T COG3845 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCchhHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchHHHHhhhhccCCCC
Q 046196 722 SWGHVPPNSTEPLGVVILKSRGLFPNAYWYWIGVGALLGYVLLFNFLFTVALKYLDPFGKPQAILSEEALAKKNACKTEE 801 (1436)
Q Consensus 722 ~~~~~~~~~~~~~g~~~l~~~g~~~~~~~~w~~~g~l~~~~~~f~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1436)
... .
T Consensus 241 ~v~--------------------------------------------------------------------------~-- 244 (501)
T COG3845 241 EVV--------------------------------------------------------------------------L-- 244 (501)
T ss_pred ccc--------------------------------------------------------------------------c--
Confidence 000 0
Q ss_pred cccccccccccccccccccccccccccCcccCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEE
Q 046196 802 PVELSSGVQSSYGEVRSFNEADQNRKRGMILPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTA 881 (1436)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 881 (1436)
.. ...+ . .| .+..++++|++...+ .....+++|||++++||++|
T Consensus 245 ~~---~~~~---------------~-----~p-g~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvG 288 (501)
T COG3845 245 RV---VKPP---------------S-----TP-GEVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVG 288 (501)
T ss_pred cc---ccCC---------------C-----CC-CCeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEE
Confidence 00 0000 0 00 023467777765432 11357999999999999999
Q ss_pred EEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC----Cccc-ccceEEEeecCCC---CCCCCcHHHHHHHHHHhcC
Q 046196 882 LMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK----NQET-FARISGYCEQTDI---HSPHVTVYESLVYSAWLRL 953 (1436)
Q Consensus 882 i~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~----~~~~-~~~~~gyv~q~~~---~~~~lTv~e~l~~~~~l~~ 953 (1436)
|.|..|-|-+-|+.+|+|..+ +.+|+|.++|.++ +... .+.-++|+|.+-. +.+.+|+.||+.+...-+-
T Consensus 289 IAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~ 366 (501)
T COG3845 289 IAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKK 366 (501)
T ss_pred EEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcccc
Confidence 999999999999999999876 3469999999986 2222 2345899998753 5689999999987654321
Q ss_pred C----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHH
Q 046196 954 P----PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1029 (1436)
Q Consensus 954 ~----~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i 1029 (1436)
| .-.+....+++..++++.++........ ..+.||||++||+-+||+|.++|++|+..+||.|||..+.+.|
T Consensus 367 ~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I 442 (501)
T COG3845 367 PFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFI 442 (501)
T ss_pred ccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHH
Confidence 1 1244566777889999999887332211 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1030 MRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1030 ~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
.+.|.+.++.|++|++++-+.+ ++++++|||.+|.+ |+++...+..
T Consensus 443 ~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 443 HERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred HHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 9999999999999999999987 79999999999996 7887776654
No 45
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.5e-43 Score=406.12 Aligned_cols=203 Identities=20% Similarity=0.256 Sum_probs=159.4
Q ss_pred CceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCc
Q 046196 836 PHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGY 915 (1436)
Q Consensus 836 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 915 (1436)
+..+.++|+++.++. +..++++++|.+.+++.+|++||||||||||||++.|... |..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 457899999887642 2258999999999999999999999999999999999887 56788754332
Q ss_pred cCCcccccceEEEeecC--CCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 916 PKNQETFARISGYCEQT--DIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 916 ~~~~~~~~~~~gyv~q~--~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
. .+++..|+ +.+.-+.++-|++.-.. + .+.+.+.+..++..+||....... ..++||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~~----~----~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPKF----P----DEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHhc----c----ccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 22333343 33444567777664211 1 133455678899999998544332 2578999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||+||..|+.++..|.+|+|||||+|||..+...+-+.|.+. ..+||+++||.. -+-..++++.+..+|+...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999998876 468999999976 377789999999999999999
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 863
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-44 Score=373.16 Aligned_cols=214 Identities=28% Similarity=0.408 Sum_probs=188.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|++.++ +..++|+|||++|++||+++|+|||||||||||+||.|+.. +.+|+|.++|.++.
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5667776554 45679999999999999999999999999999999999887 67999999997653
Q ss_pred ----cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 919 ----QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 919 ----~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
....++.+|+|+|+..+||++||.||+..+...- ...+.++.++.+.+.|+.+||.+.+|.. +.+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2346788999999999999999999998874322 2456677778889999999999988876 5689999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|||||+|||||+.+|+++++|||||.|||+....+.+.+++++++|.|.||+||+... ..+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6778999999995 7888888
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=369.33 Aligned_cols=222 Identities=24% Similarity=0.381 Sum_probs=187.6
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc----cccceEEEecCCCCcC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~~~~~ 240 (1436)
.+..+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|+++... ..++.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 3467999999999999999999999999999999999999998 99999999766321 2356799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
|.+||.||+..+...- ... ..++.......+|+.+||.+.+|.
T Consensus 90 PHlTvleNv~lap~~v---------~~~------------------------~k~eA~~~A~~lL~~VGL~~ka~~---- 132 (240)
T COG1126 90 PHLTVLENVTLAPVKV---------KKL------------------------SKAEAREKALELLEKVGLADKADA---- 132 (240)
T ss_pred ccchHHHHHHhhhHHH---------cCC------------------------CHHHHHHHHHHHHHHcCchhhhhh----
Confidence 9999999999874311 111 112223345668999999998874
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
++..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++ .|.|.+.++|....+.+.+|||+.|
T Consensus 133 -yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 133 -YPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred -CccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHhhheEEEe
Confidence 4567999999999999999999999999999999999999999999999986 4667777899999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHH
Q 046196 401 SDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQE 437 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 437 (1436)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999887 455666556666654
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-41 Score=361.07 Aligned_cols=232 Identities=26% Similarity=0.380 Sum_probs=199.3
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..+++++++.+. +.+.+|+|||++|++||+++||||||+||||||++|.|+.+ |.+|+|.++|.+
T Consensus 7 ~~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~ 71 (263)
T COG1127 7 PLIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGED 71 (263)
T ss_pred ceEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcc
Confidence 357888887654 45679999999999999999999999999999999999988 579999999998
Q ss_pred CCc------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCC
Q 046196 917 KNQ------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGVS 989 (1436)
Q Consensus 917 ~~~------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~ 989 (1436)
+.+ ...++++|+++|+-.+|..+||+||+.|.. |.....+++..++.+..-++.+||... .+.. +.
T Consensus 72 i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----Ps 144 (263)
T COG1127 72 IPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PS 144 (263)
T ss_pred hhccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----ch
Confidence 643 134677999999999999999999999854 333456677777888888999999876 5544 67
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
+||||+|||++|||||+.||+|||+||||+||||.++..+.++|+++.++ |.|++++|||.+ +++..+|++++|.+ |
T Consensus 145 ELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-g 222 (263)
T COG1127 145 ELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-G 222 (263)
T ss_pred hhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-C
Confidence 89999999999999999999999999999999999999999999999876 999999999987 68999999999996 7
Q ss_pred EEEEEcCCCc----chhHHHHHhhhCCC
Q 046196 1069 EEIYVGPLGR----HCSQLIKYFEGIDG 1092 (1436)
Q Consensus 1069 ~~~y~G~~~~----~~~~~~~yf~~~~~ 1092 (1436)
++++.|+..+ ....+.+||....+
T Consensus 223 kv~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 223 KVIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999999631 11346788887654
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=372.05 Aligned_cols=224 Identities=26% Similarity=0.348 Sum_probs=194.5
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDL 238 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~ 238 (1436)
+..++|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..... ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999988876543 367999999999
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
++...||.||++|..+..+.. ..+...++.++|+.+||++.+|
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~--- 136 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKAD--- 136 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc---
Confidence 999999999999998776532 1223456778999999998887
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
+++.+|||||||||+|||||+.+|+|||.|||||+|||.|+..|++.|+++.+.. +.||+.++|-++-+-+.||||.
T Consensus 137 --~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 137 --RYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred --cCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 4456799999999999999999999999999999999999999999999998765 5677779999999999999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhc
Q 046196 399 LLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVT 439 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 439 (1436)
||++|+++++|+..++ |..|.+.-.-.|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999888 34566555566665544
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-41 Score=391.37 Aligned_cols=210 Identities=31% Similarity=0.458 Sum_probs=186.1
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCc
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lT 940 (1436)
++.+|+||||+|++|+++||+||||||||||||+|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 3679999999999999999999999999999999999987 579999999988654 456778999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1020 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsg 1020 (1436)
|+|+|.|.+.++.+.. +...++++++++.++|.+..++. +++||+||||||+||+||+++|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999986543 34456789999999999855444 468999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHhh
Q 046196 1021 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLGRHCSQLIKYFE 1088 (1436)
Q Consensus 1021 LD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~ 1088 (1436)
|||.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|+. .++...+.
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~----~~l~~~~~ 229 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP----EELKEKFG 229 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH----HHHHHhhc
Confidence 99999999999999999887 89999999987 68888999999996 799999975 34555544
No 51
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-41 Score=410.07 Aligned_cols=226 Identities=23% Similarity=0.414 Sum_probs=196.9
Q ss_pred ceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHH
Q 046196 118 TIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLL 197 (1436)
Q Consensus 118 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 197 (1436)
+..|+|+|+++.+.. + ++.+||+|+||+|+|||.|||||||||||||+.
T Consensus 463 ~G~IeF~~VsFaYP~------------------------------R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTia 511 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPT------------------------------R-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIA 511 (716)
T ss_pred cceEEEEEeeeecCC------------------------------C-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHH
Confidence 578999999998731 2 345699999999999999999999999999999
Q ss_pred HHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHH
Q 046196 198 LALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKA 274 (1436)
Q Consensus 198 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 274 (1436)
++|..+++|+ +|+|.+||+|+++++++ +.+|+|.|+|.+|. -||+|||.||..
T Consensus 512 sLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-------------------- 567 (716)
T KOG0058|consen 512 SLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-------------------- 567 (716)
T ss_pred HHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC--------------------
Confidence 9999999998 99999999999988764 78999999999775 599999999843
Q ss_pred ccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCC
Q 046196 275 ANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEIST 354 (1436)
Q Consensus 275 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEpts 354 (1436)
..+.|+++.|+.+++.+.. +.++++++||.||+++. .||||||||++|||||+++|+||||||.||
T Consensus 568 -----~~t~e~i~~AAk~ANah~F--------I~~~p~gY~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATS 633 (716)
T KOG0058|consen 568 -----NATDEEIEAAAKMANAHEF--------ITNFPDGYNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATS 633 (716)
T ss_pred -----CCCHHHHHHHHHHhChHHH--------HHhCccccccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhh
Confidence 3455677778777776655 45799999999999877 599999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHH
Q 046196 355 GLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 355 gLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~ 416 (1436)
+||+.+...+.+.|.+..+ + .|+++|.| +..+.+.+|+|+|+++|++++.|+++|+++
T Consensus 634 ALDaeSE~lVq~aL~~~~~--~-rTVlvIAH-RLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 634 ALDAESEYLVQEALDRLMQ--G-RTVLVIAH-RLSTVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred hcchhhHHHHHHHHHHhhc--C-CeEEEEeh-hhhHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 9999999999999988643 3 45554544 567899999999999999999999999975
No 52
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=360.32 Aligned_cols=210 Identities=24% Similarity=0.373 Sum_probs=186.2
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~ 242 (1436)
++.+++|+|++|++||+++++|||||||||+|++|.++++|+ +|+|.+||.++.+..+ ++.+|||-|+--+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 456999999999999999999999999999999999999998 9999999999987654 5789999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||.|||.+-..+.+..+ ++...+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999998776654321 2234567889999999752 123577
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
++.|||||+|||.+||||+.+|+|++||||+++||+-++.++.+.++++.+..+ +||+.++|+.+|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecC
Confidence 889999999999999999999999999999999999999999999999877664 5566689999999999999999999
Q ss_pred CeEEEecChhHHHH
Q 046196 403 GQIVYQGPRENVLE 416 (1436)
Q Consensus 403 G~iv~~G~~~~~~~ 416 (1436)
|+++..|++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=371.83 Aligned_cols=218 Identities=25% Similarity=0.336 Sum_probs=190.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
+++++++..+... ......+|+|||++|++||++||+|+||||||||++++.++.. |.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5677776544210 1123569999999999999999999999999999999999887 67999999997653
Q ss_pred c------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 Q------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
. +..++.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+..+.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 3456889999999999999999999999877653 56788899999999999999888876 56899
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
|||||||+|||||+.+|+||++|||||.|||.+.+.|.+.|+++.++ |.||+++||+++ -+-+.||||.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999755 999999999976 46779999999996 7999
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99985
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-41 Score=358.30 Aligned_cols=213 Identities=27% Similarity=0.385 Sum_probs=189.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++|+|++..+ .++.+++|+|++|++||+++++|||||||||+|++|.++.+ +++|+|++||.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 5677877554 34679999999999999999999999999999999999987 67999999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP--IREALVGLPGVSGLST 993 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~~g~~~~~~LSg 993 (1436)
. ..++|.+|||-|.-.+||++||.||+.+...+. ..++++.+++++|+++.+||.+ +.++. +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457889999999999999999999998876554 4567788889999999999985 56654 578999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||+|||.+||||+.+|+||+||||++.|||.++..+++-++++.++ |+|||++|||.+ +.+.+.|||.+|++ |+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 999999999987 78999999999995 78877
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.+++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7764
No 55
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=385.61 Aligned_cols=217 Identities=30% Similarity=0.431 Sum_probs=193.4
Q ss_pred eeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc-ceEEEecCCCCcCCCCCHHH
Q 046196 169 ILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ-RTSAYISQNDLHIGEMTVRE 247 (1436)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~~~~~~~lTV~E 247 (1436)
+|+|+|++|+.||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998775 78999999999999999999
Q ss_pred HHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 046196 248 TLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGIS 327 (1436)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 327 (1436)
||.|+.+.++... ++...+++++.+.|+|++..|.. ++.||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999988765321 12345677889999999988754 56799
Q ss_pred hhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEE
Q 046196 328 GGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVY 407 (1436)
Q Consensus 328 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~ 407 (1436)
|||||||++||||+.+|+++|||||+|.||+..+.++...++++.+.. ++++|.++|+..|+..++|+|++|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999976654 5666668999999999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCCHHHHHH
Q 046196 408 QGPRENVLEFFERMGFKCPERKGVADFLQ 436 (1436)
Q Consensus 408 ~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 436 (1436)
.|++.++. ..|...-+|+|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4677766777754
No 56
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-41 Score=366.22 Aligned_cols=217 Identities=26% Similarity=0.404 Sum_probs=184.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ .+ ++|+|||+++++|++++|+||||||||||+|+|.|..+ |.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 588999988874 12 59999999999999999999999999999999999887 5799999999987
Q ss_pred CcccccceEEEeecCCCC--CCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 918 NQETFARISGYCEQTDIH--SPHVTVYESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~--~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
....-+..+|||||...+ ..-+||+|-+..+..-+... ....++.++.++++|+.+|+.+++|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 654445689999995422 23479999998764332210 11123336779999999999999999865 69999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+|+.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999997 5889999999997 5899999
Q ss_pred CCC
Q 046196 1075 PLG 1077 (1436)
Q Consensus 1075 ~~~ 1077 (1436)
|+.
T Consensus 221 ~~~ 223 (254)
T COG1121 221 PPE 223 (254)
T ss_pred Chh
Confidence 874
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-41 Score=361.56 Aligned_cols=204 Identities=25% Similarity=0.377 Sum_probs=180.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 366777776653 2569999999999999999999999999999999999987 5799999999987
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
.. ....+|||+|++.++|-+||+||+.++...+. .+.+++.+++++.++.+||.+..|.. +.+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 24568999999999999999999999876653 34566677899999999999999886 5789999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
||+|||||+.+|+||+||||++.||+.++..+++.|.++.+ .++|||++|||.+ |...++|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999864 4899999999987 678899999999974
No 58
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.7e-36 Score=408.05 Aligned_cols=216 Identities=22% Similarity=0.359 Sum_probs=186.1
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46888998876521 23569999999999999999999999999999999999987 579999999988
Q ss_pred CCc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 917 KNQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 917 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. .+.++.++.++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 743 2345679999999999999999999999876653 223344556889999999998877764 579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 5999999999986 57778999999996 7888988
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 74
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.3e-41 Score=369.60 Aligned_cols=218 Identities=28% Similarity=0.405 Sum_probs=187.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++.+|+++.++ ++.+|+|+||++++|++++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367788887763 4679999999999999999999999999999999999887 5699999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. +.+++.++|+||.....+.+||+|.+.++..-.... ....++..+.++++++.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 457789999999998889999999998874321111 1123334457899999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||+.|||||+++|+||+||||||+||...+..+++.++++++ +|+|||+++||++. ....+|++++|++ |++++
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999984 7889999999996 79999
Q ss_pred EcCCC
Q 046196 1073 VGPLG 1077 (1436)
Q Consensus 1073 ~G~~~ 1077 (1436)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99863
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=387.50 Aligned_cols=223 Identities=29% Similarity=0.432 Sum_probs=197.4
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc-ceEEEecCCCCcCCCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ-RTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~~~~~~~lT 244 (1436)
..++|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+. |.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999998 99999999999987774 78999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|+.+.+.... ..+...+++++|+.++|++.++ +.+.
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChh
Confidence 9999999987432111 0123346788999999998776 4556
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+|||||+.+|++||||||.|+||..-+.++...++++.+.. +.+.|.++|+..|...++|||++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 799999999999999999999999999999999999999999999998766 6666678999999999999999999999
Q ss_pred EEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 046196 405 IVYQGPRENVLEFFERMGFKCPERKGVADFLQEV 438 (1436)
Q Consensus 405 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 438 (1436)
|...|+++|+ |..|...-+|+|+.+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578777888888654
No 61
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=9e-41 Score=368.37 Aligned_cols=210 Identities=33% Similarity=0.442 Sum_probs=181.7
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGE 242 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~ 242 (1436)
++++|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 356999999999999999999999999999999999999998 99999999999877654 689999999888899
Q ss_pred CCHHHHHHhhhhh-cCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 243 MTVRETLAFSARC-QGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 243 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
+||+|-+.+|..- ++.. . ....++...++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~~~~-------------------~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~-- 137 (258)
T COG1120 91 LTVYELVLLGRYPHLGLF-------------------G------------RPSKEDEEIVEEALELLGLEHLADRPVD-- 137 (258)
T ss_pred cEEeehHhhcCCcccccc-------------------c------------CCCHhHHHHHHHHHHHhCcHHHhcCccc--
Confidence 9999999998431 1100 0 0011222356778999999999987765
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.|||||||||.|||||+++|++|+||||||+||.....++++.++++++.. +.++|.++|+.+.+..+||++++|+
T Consensus 138 ---~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 138 ---ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLK 213 (258)
T ss_pred ---ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 599999999999999999999999999999999999999999999998654 5666668899999999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|+++++|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998875
No 62
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-41 Score=364.82 Aligned_cols=224 Identities=30% Similarity=0.446 Sum_probs=189.4
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCc---cCCCccc-cceEEEecCCCCcC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGH---GMEEFVP-QRTSAYISQNDLHI 240 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~~~~~ 240 (1436)
....+++|||+.|+.||+++++|||||||||||++|+|+..|+ +|+|.+||. +.+.... .|.+|||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 6655333 47899999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.|||.+||+||.+++.. .|+ ..+.+.+++++|+.+.|++.++
T Consensus 90 ~HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la~----- 132 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLAD----- 132 (345)
T ss_pred ccchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchhh-----
Confidence 999999999999876521 010 1123446677899999987665
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+++..|||||||||++||||+..|++|+||||+++||...+..+.+.|+++....+.| .+.++|+..|++++||+|++|
T Consensus 133 ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~t-tvfVTHD~eea~~ladrvvvl 211 (345)
T COG1118 133 RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVT-TVFVTHDQEEALELADRVVVL 211 (345)
T ss_pred cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCce-EEEEeCCHHHHHhhcceEEEe
Confidence 6678899999999999999999999999999999999999999999999987655544 445899999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHH
Q 046196 401 SDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQE 437 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 437 (1436)
++|+|...||++|+. ..|...-+..|+-+
T Consensus 212 ~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 212 NQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred cCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 999999999999984 34555555555544
No 63
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=341.59 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=184.0
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC--cccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN--QETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
.++++||||+++.||++||+|+|||||||+|++|++.+. |++|.|++||.+.. +...++.+|.++.+..++..||+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 348999999999999999999999999999999999988 67999999999863 34567889999988889999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+|||.|.+.+. +....+.+++.+++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 34556677889999999999999999876 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|..+...+.+.++++.+.|++||++||..+ ++..+||++++|++ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999988999999999986 78889999999997 799999975
No 64
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.1e-40 Score=354.41 Aligned_cols=193 Identities=31% Similarity=0.450 Sum_probs=168.0
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------cc-cceEEEeecCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------TF-ARISGYCEQTDIHS 936 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~-~~~~gyv~q~~~~~ 936 (1436)
..+|++||++|++||+++|||||||||||||++|.|... |.+|.|.++|.++... .+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 569999999999999999999999999999999999987 5799999999776421 23 45699999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 046196 937 PHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIRE-ALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1015 (1436)
Q Consensus 937 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~-~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlD 1015 (1436)
|++||.||+.+...+... ....+++.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|++|+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245667899999999986655 43 4689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...+||++.|.+|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999865 89999999996 4778999999999854
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.8e-40 Score=346.04 Aligned_cols=211 Identities=25% Similarity=0.357 Sum_probs=179.7
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDL 238 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~ 238 (1436)
..+.||+|||++|++||+++|+|||||||||||++|.|++.|+ +|+|.++|+++.+... ++++|+++|+..
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3456999999999999999999999999999999999999998 9999999999866543 357999999999
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
+|.++||+||+.|..+-.. ++.+ ...+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~---------~lp~------------------------~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------KLPE------------------------SLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhc---------cCCH------------------------HHHHHHHHHHHHhcCCChh----h
Confidence 9999999999999764321 0111 1112233344788999754 2
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
.+.++.+||||++||++||||++.+|+++|+||||+||||.++..+.+.++++.+..+. |+++++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~-T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGL-TVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCC-EEEEEECChHHHHhhhceEE
Confidence 35778889999999999999999999999999999999999999999999998877654 45558999999999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 046196 399 LLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~ 416 (1436)
+|.+|+|+..|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 66
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=355.21 Aligned_cols=192 Identities=25% Similarity=0.367 Sum_probs=170.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
..+|+|||++|++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 56999999999999999999999999999999999999998 999999999883 4567899999999999999999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.|+.+..+... .+...+++.+|+.+||.+..| +.++.|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987654211 111225677899999998876 566789
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.|++.++|+.+|...++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999999987754 566677999999999999999999984
No 67
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-40 Score=348.09 Aligned_cols=220 Identities=27% Similarity=0.342 Sum_probs=186.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888876552 45679999999999999999999999999999999999876 6799999999765
Q ss_pred Cc------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 046196 918 NQ------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-----PEVDSDTRKMFVEEVMELVELNPIREALVGLP 986 (1436)
Q Consensus 918 ~~------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-----~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~ 986 (1436)
.. +.+++.+||++|+..+.+.++|.+|+..+..-+.+ -....++.+..+-+.++.+|+.+.+-+..+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 24567899999999999999999999876432211 122234445567789999999988877654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
.|||||+|||+|||||+.+|+||+.|||+++|||.++..+|+.|+++++ .|.|||++.||.+. ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 6999999999999999999999999999999999999999999999975 48999999999874 678999999999
Q ss_pred cCcEEEEEcCCCc
Q 046196 1066 RGGEEIYVGPLGR 1078 (1436)
Q Consensus 1066 ~Gg~~~y~G~~~~ 1078 (1436)
+ |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 6 79999999754
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=358.69 Aligned_cols=204 Identities=29% Similarity=0.459 Sum_probs=183.7
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCc---cCCc-ccccceEEEeecCCCCCCC
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGY---PKNQ-ETFARISGYCEQTDIHSPH 938 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~q~~~~~~~ 938 (1436)
...+++|||+.|+.||++||+|||||||||||++|+|+.+ +..|.|.+||. +.+. ....|.+|||+|+..+|++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999988 57999999999 5443 3345789999999999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 939 VTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
|||.+|+.|+...+ ....+..+.+.+++++++.+.|+++.+.. +.+|||||||||++||||+.+|++|+||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 22334566778899999999999999886 5789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
++||+.-+..+.+.|+++.++ |.|+|++|||+. ++.+.+|||++|++ |++.-.||.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p 222 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPP 222 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCH
Confidence 999999999999999999876 999999999986 79999999999997 688888886
No 69
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-39 Score=376.64 Aligned_cols=211 Identities=34% Similarity=0.461 Sum_probs=184.1
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc--cccceEEEecCCCCcCCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF--VPQRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~l 243 (1436)
.+++|+||||+|++|++++|+||||||||||+++|+|++.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 467999999999999999999999999999999999999997 99999999887652 3356799999999999999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+|||.|.+++.+... ......++++++.+||++..++. +
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-----~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKANKK-----V 134 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhCcc-----h
Confidence 99999999988875321 01123567789999999854444 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999863 4366666889999999999999999999
Q ss_pred eEEEecChhHHHHHHH
Q 046196 404 QIVYQGPRENVLEFFE 419 (1436)
Q Consensus 404 ~iv~~G~~~~~~~~f~ 419 (1436)
++++.|+.+++...+.
T Consensus 214 ~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 214 KIIAEGTPEELKEKFG 229 (293)
T ss_pred EEEEeCCHHHHHHhhc
Confidence 9999999999876554
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=356.57 Aligned_cols=207 Identities=27% Similarity=0.431 Sum_probs=176.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCC---CCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQN---DLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~---~~~~~~lT 244 (1436)
++|+|||+++++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+.++|||||. |+-| .+|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~f-P~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSF-PIT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCC-CcC
Confidence 4999999999999999999999999999999999999998 99999999988777666789999995 4434 579
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+|.+..+..-+. ...... ..++...++++|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~-----g~~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK-----GWFRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc-----cccccc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999998732110 000001 112234677889999999999988875
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.+. +.+|++++|+...+.++||+|+.| +++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~L-n~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICL-NRH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEE-cCe
Confidence 9999999999999999999999999999999999999999999999764 677777999999999999999999 557
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999998754
No 71
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=373.13 Aligned_cols=214 Identities=29% Similarity=0.430 Sum_probs=191.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..+. ...+|+|+|++|++||.++|+|||||||||||++|||+.. +++|+|.|+|.++
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467777765542 2228999999999999999999999999999999999987 6799999999998
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
+. ...+|.+++|+|+..++|+|||+||+.|+.+.+ ..+.++..++|+++.+.|++.++.|.. +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 445688999999999999999999999998776 345677788899999999999999987 468999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. +...++|||.+|. .|++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999975 7899999999999 579988887
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 5
No 72
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-39 Score=330.60 Aligned_cols=213 Identities=28% Similarity=0.362 Sum_probs=183.7
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
|.|+|++..|. ..+++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 57888776553 23569999999999999999999999999999999999877 57999999999864
Q ss_pred c------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 Q------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
. .-++|.+|+|+||..+.++.||+||+.|..... ..+.++.+++|.++++.+||.+..+.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 135788999999999999999999999987665 345567778899999999999888776 46899
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||+|||+||||++.+|++|+.||||-+|||..+..|++++.++.+.|.|||+.||+.+. +-..-.+++.|++ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999899999999999542 4445678888886 67776
Q ss_pred EcC
Q 046196 1073 VGP 1075 (1436)
Q Consensus 1073 ~G~ 1075 (1436)
...
T Consensus 218 d~~ 220 (223)
T COG2884 218 DES 220 (223)
T ss_pred ccc
Confidence 543
No 73
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-40 Score=336.65 Aligned_cols=213 Identities=30% Similarity=0.338 Sum_probs=185.9
Q ss_pred cCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCC
Q 046196 160 LPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQND 237 (1436)
Q Consensus 160 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~ 237 (1436)
.++++...++++||||+++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..... .++.+|.++.+.
T Consensus 8 ~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~ 84 (245)
T COG4555 8 TKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGER 84 (245)
T ss_pred hhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCc
Confidence 344445556999999999999999999999999999999999999999 999999999875432 357899999888
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
.++..||++|||.|.+++.+.. + .+.+.+++.+.+.|+|.+|.|+.
T Consensus 85 glY~RlT~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rR 130 (245)
T COG4555 85 GLYARLTARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRR 130 (245)
T ss_pred ChhhhhhHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHH
Confidence 8899999999999998875432 1 22334677889999999999999
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+|+ +|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++.. .+.+|+..+|..+|+..+||+|
T Consensus 131 v~~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrv 203 (245)
T COG4555 131 VGE-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRV 203 (245)
T ss_pred Hhh-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheE
Confidence 985 999999999999999999999999999999999999999999998743 3566777899999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 046196 398 ILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~ 416 (1436)
++|++|++++.|+.+++.+
T Consensus 204 ivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 204 IVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEecCcEEEcCCHHHHHH
Confidence 9999999999999988764
No 74
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.7e-39 Score=408.53 Aligned_cols=258 Identities=29% Similarity=0.425 Sum_probs=214.1
Q ss_pred hhhhHHHHHHHHHhcccchHHHHHHHHHHHHhcCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcc
Q 046196 80 FIERRNLIERLLKIAEEDNEKFLLKLKDRIERVGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHV 159 (1436)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1436)
.++-+.-.+|+.++++.++|.-..+. ....+....+++|+|+++.+..
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~--------------------------- 483 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGP--------------------------- 483 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCC---------------------------
Confidence 45667777888888887777322110 1112223568999999999742
Q ss_pred cCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCC
Q 046196 160 LPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQN 236 (1436)
Q Consensus 160 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 236 (1436)
.+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ ++.++||+|+
T Consensus 484 -----~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 484 -----DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred -----CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 1125899999999999999999999999999999999999998 9999999999987765 4789999999
Q ss_pred CCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 237 DLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 237 ~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
+.++ +.||+|||.++ .|+.+.+++++|+.+++.+.. +..++.++||
T Consensus 556 ~~Lf-~gSI~eNi~l~-------------------------~p~~~~e~i~~A~~~ag~~~f--------I~~lP~gy~t 601 (709)
T COG2274 556 PFLF-SGSIRENIALG-------------------------NPEATDEEIIEAAQLAGAHEF--------IENLPMGYDT 601 (709)
T ss_pred chhh-cCcHHHHHhcC-------------------------CCCCCHHHHHHHHHHhCcHHH--------HHhccccccc
Confidence 9855 67999999986 355666788888888877655 4569999999
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++.+ ++|+|+ ++| +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~-IaH-Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVII-IAH-RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEE-EEc-cchHhhhccE
Confidence 9997665 7999999999999999999999999999999999999999999999753 455555 444 3578899999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 046196 397 LILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~~ 416 (1436)
|+||++|+|+.+|+++|+++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 75
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=341.15 Aligned_cols=220 Identities=22% Similarity=0.313 Sum_probs=181.6
Q ss_pred CCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecC
Q 046196 162 SRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQ 235 (1436)
Q Consensus 162 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q 235 (1436)
.+..++++|+|||++|++||+++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|
T Consensus 12 ~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ 88 (258)
T COG3638 12 TYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQ 88 (258)
T ss_pred ecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEec
Confidence 3335567999999999999999999999999999999999999998 9999999988765542 367999999
Q ss_pred CCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccc
Q 046196 236 NDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCAD 315 (1436)
Q Consensus 236 ~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 315 (1436)
+..+.+.+||.+|+..+..-+. +..+. -.+.. ..++...+-+.|+.+|+.+.+-
T Consensus 89 ~~nLv~r~sv~~NVl~grl~~~--s~~~s---------lfglf---------------sk~dk~~Al~aLervgi~~~A~ 142 (258)
T COG3638 89 QFNLVPRLSVLENVLLGRLGYT--STWRS---------LFGLF---------------SKEDKAQALDALERVGILDKAY 142 (258)
T ss_pred cCCcccccHHHHHHHhhhcccc--hHHHH---------HhCCC---------------CHHHHHHHHHHHHHcCcHHHHH
Confidence 9999999999999998753211 11111 01111 1122234445789999998887
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcc
Q 046196 316 TMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFD 395 (1436)
Q Consensus 316 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 395 (1436)
+..+ .|||||+|||+|||||+++|+++|-|||+++||+.++.++++.|++.+...+.|+|+ .+|..+-+.++||
T Consensus 143 qra~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~ 216 (258)
T COG3638 143 QRAS-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYAD 216 (258)
T ss_pred HHhc-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHh
Confidence 7765 499999999999999999999999999999999999999999999998765555555 5677889999999
Q ss_pred cEEEecCCeEEEecChhHHHH
Q 046196 396 DLILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 396 ~iivL~~G~iv~~G~~~~~~~ 416 (1436)
||+-|++|+|+|.||++++.+
T Consensus 217 Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 217 RIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred hheEecCCcEEEeCChhhhhH
Confidence 999999999999999998754
No 76
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=334.12 Aligned_cols=221 Identities=24% Similarity=0.388 Sum_probs=177.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCcc-----ccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 239 (1436)
+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+.. .++++|.|+|.+.-
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 459999999999999999999999999999999998865 45678999999999886542 35789999999998
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCC-cccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGL-EVCADTMV 318 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL-~~~~dt~v 318 (1436)
|| +|++||+.||.+..|... +.+.+ +++.-|+.-+| ++..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh-
Confidence 88 999999999999877533 11111 11222222222 1122222
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
++...+|||||+||++|||||+-+|+|||||||||+|||.++..|.+.+.++.+ .-+|+.++|.+.++.+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 123457999999999999999999999999999999999999999999999853 4566668999999999999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHH
Q 046196 399 LLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFL 435 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 435 (1436)
.+..|++++.|+.+++ |..|.++...||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999987 4456666666654
No 77
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=372.12 Aligned_cols=215 Identities=27% Similarity=0.397 Sum_probs=191.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..+ +...+|+|+|++|++||+++|+|||||||||||++|||... |.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 57788876554 34679999999999999999999999999999999999987 6799999999998
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...+|.+|+|+|+..+||+|||+||+.|+.+++. ....++.+++++++++.++|.+..+.. +.+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 65 3457889999999999999999999999987442 334566778899999999999988876 468999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+||||.|+||..-+..++.-++++.++ |.|.|++|||.. +...++|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998754 999999999976 78999999999996 78888887
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 5
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-38 Score=370.42 Aligned_cols=215 Identities=28% Similarity=0.409 Sum_probs=186.9
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|++..+. ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3588899887652 2459999999999999999999999999999999999987 579999999998
Q ss_pred CCc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 917 KNQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 917 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
+.. ...++.+||++|+..+++.+||+||+.|.+.++. .+..+..++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2345779999999999999999999998766542 233344456789999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 67889999999996 7999999
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 221 ~~ 222 (306)
T PRK13537 221 AP 222 (306)
T ss_pred CH
Confidence 85
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-38 Score=342.75 Aligned_cols=196 Identities=27% Similarity=0.403 Sum_probs=166.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
.++|+|||++|++||+++|+|||||||||||++|.|+..|+ +|+|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999988876542 2569999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++++||+||+.+...+.+.... ......+.+++.+||++..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999987665543210 01223566889999986655
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
++.+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++. .++++++++|+. ++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEEE
Confidence 2335579999999999999999999999999999999999999999999998764 356666677764 77889999999
Q ss_pred ecCCeE
Q 046196 400 LSDGQI 405 (1436)
Q Consensus 400 L~~G~i 405 (1436)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999984
No 80
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.2e-38 Score=365.30 Aligned_cols=229 Identities=21% Similarity=0.363 Sum_probs=188.5
Q ss_pred cCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCC
Q 046196 112 VGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSS 191 (1436)
Q Consensus 112 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 191 (1436)
..+..+.-.|+|+|+++++. .+++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 45667778899999999873 223499999999999999999999999
Q ss_pred CHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhh
Q 046196 192 GKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQEL 268 (1436)
Q Consensus 192 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 268 (1436)
||||++++|.++++ + +|+|.+||.++++..+ ++.+|||||+..+| +.||.+||.+|..
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~-------------- 450 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNP-------------- 450 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCC--------------
Confidence 99999999999998 5 8999999999987665 46799999988755 5699999999842
Q ss_pred hHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeE
Q 046196 269 SRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALF 348 (1436)
Q Consensus 269 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~ill 348 (1436)
+...|++.++|+..+-++. +..|+++++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 451 -----------sas~eeV~e~~k~a~~hd~--------i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 451 -----------SASDEEVVEACKRAGLHDV--------ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred -----------CcCHHHHHHHHHHcCcHHH--------HHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 2222333333333332221 345899999999998875 99999999999999999999999
Q ss_pred EeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHH
Q 046196 349 MDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 349 LDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~ 416 (1436)
+|||||+||+.|...+++.+.+. .++.|+|.+.|.. .+...||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999983 2344444455654 5788999999999999999999999976
No 81
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=328.47 Aligned_cols=218 Identities=26% Similarity=0.348 Sum_probs=185.1
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC---CCceeEEEEEC
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYVSGSITIS 913 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 913 (1436)
..++++|++..+ +.+++|+|||+.|++++++|+||||||||||||++|..... +-..+|+|.++
T Consensus 6 ~~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 357788887766 34679999999999999999999999999999999998532 33578999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCC
Q 046196 914 GYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPG 987 (1436)
Q Consensus 914 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~ 987 (1436)
|+++.. ..+++.+|+|+|.+.-|| +|++||+.|+.++..-.+ ++..+.|++.++...|.+ ++|.+-..
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-- 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-- 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--
Confidence 988643 346888999999999999 999999999987764332 566677888888888864 44555333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
..+|||||+|||||||+|+-+|+||+||||||+|||.+...|-++|.+++ +.-|||++||.+. ......|+..++..
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~- 223 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL- 223 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-
Confidence 35799999999999999999999999999999999999999999999997 4689999999976 57778999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++.+|+.
T Consensus 224 G~LvE~g~T 232 (253)
T COG1117 224 GELVEFGPT 232 (253)
T ss_pred cEEEEEcCH
Confidence 699999986
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.4e-38 Score=367.49 Aligned_cols=217 Identities=25% Similarity=0.324 Sum_probs=185.1
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. ...+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788887766310 112469999999999999999999999999999999999987 57999999998864
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ..++.+||++|+..+++..||+||+.+..... ..+.++.++++.++++.+||.+..+.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 13567999999999999999999999876433 233455566789999999999887765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999976 57788999999985 7999
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99975
No 83
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.5e-37 Score=364.88 Aligned_cols=206 Identities=22% Similarity=0.327 Sum_probs=177.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~~~ 240 (1436)
.++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++....+ ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998876432 35799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.|+.+..+... .+...++.++++.+||++..|...
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754332110 011224567899999988777554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+.. +.+|+.++|+.+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 5699999999999999999999999999999999999999999999987643 456666899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=366.45 Aligned_cols=206 Identities=22% Similarity=0.372 Sum_probs=178.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc-ceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ-RTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~~~~~~~lTV 245 (1436)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+. +.++||+|+..+++++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 99999999988765543 679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+.++... .+....++++++.+||.+..|.. ++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999865432110 01123456789999998776644 457
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 45666689999999999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 85
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.8e-37 Score=367.27 Aligned_cols=208 Identities=24% Similarity=0.349 Sum_probs=179.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcc--eEEEECCccCCCccc-cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFS--GRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~l 243 (1436)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35899999999999999999999999999999999999998 8 999999998865443 36799999999999999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.|+.+..+... .+....++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999865432110 011234567899999998777554
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999999865432566777899999999999999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+++..|+++++.+
T Consensus 216 ~i~~~g~~~~~~~ 228 (362)
T TIGR03258 216 RLAAHGEPQALYD 228 (362)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998853
No 86
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.7e-37 Score=367.14 Aligned_cols=207 Identities=26% Similarity=0.415 Sum_probs=179.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 35899999999999999999999999999999999999998 9999999998865444 4679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+..+.. + .+....++.+++.+||++..|.. ++.
T Consensus 94 ~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~L~~~~~~~-----~~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------R------------------------AEVAERVAELLDLVGLPGSERKY-----PGQ 134 (353)
T ss_pred HHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhCC-----hhh
Confidence 99999986532210 0 01123467789999999877754 456
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543 45666689999999999999999999999
Q ss_pred EEecChhHHHH
Q 046196 406 VYQGPRENVLE 416 (1436)
Q Consensus 406 v~~G~~~~~~~ 416 (1436)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 87
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-38 Score=347.41 Aligned_cols=207 Identities=28% Similarity=0.388 Sum_probs=181.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCC----CccccceEEEecCC-CCcCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGME----EFVPQRTSAYISQN-DLHIG 241 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~-~~~~~ 241 (1436)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|+ +.++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 56999999999999999999999999999999999999998 899999998865 22345789999999 56788
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
..||.|.++|+.+..+... ++...+++.+|+.+||.+.++ +
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLD-----R 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----C
Confidence 8899999999988766432 112345678899999998876 4
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++... ++.++|+++|+...+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 45679999999999999999999999999999999999999999999998753 45677778999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 88
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=351.07 Aligned_cols=202 Identities=26% Similarity=0.384 Sum_probs=173.1
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc------ccccceEEEeecCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ------ETFARISGYCEQTDIHSP 937 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~q~~~~~~ 937 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 359999999999999999999999999999999999987 568999999987642 124567999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1017 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEP 1017 (1436)
.+||+||+.+...... ..+.++..+.++++++.+++.+..++. +..|||||||||+||++|+.+|++|+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLY-----PAELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 123344455678899999998766655 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1018 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1018 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 9999999999999999998764 899999999986 57778999999996 788888874
No 89
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=360.37 Aligned_cols=250 Identities=22% Similarity=0.389 Sum_probs=206.3
Q ss_pred HHHHHHhcccchHHHHHHHHHHHHhcCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCc
Q 046196 87 IERLLKIAEEDNEKFLLKLKDRIERVGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKP 166 (1436)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1436)
+|+.+++++|++| +.+.........++..|.|+|+++.++ .+
T Consensus 509 mEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~---------------------------------p~ 550 (790)
T KOG0056|consen 509 MENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYD---------------------------------PG 550 (790)
T ss_pred HHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecC---------------------------------CC
Confidence 4567777777666 444333444556778999999998874 23
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc---ccceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV---PQRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1436)
+++|+||||++.||+.+|++||||+||||++++|.++.+.+ +|.|+++|++++... .++.+|.|||+..+| +.
T Consensus 551 k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLF-Nd 626 (790)
T KOG0056|consen 551 KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLF-ND 626 (790)
T ss_pred CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceee-cc
Confidence 56999999999999999999999999999999999999987 999999999987543 346799999998866 45
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|+..||.|+ +|++..|++.+|++.++-++ ++++++++++|.||+++.
T Consensus 627 TI~yNIrya-------------------------k~~AsneevyaAAkAA~IHd--------rIl~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 627 TILYNIRYA-------------------------KPSASNEEVYAAAKAAQIHD--------RILQFPEGYNTRVGERGL 673 (790)
T ss_pred eeeeheeec-------------------------CCCCChHHHHHHHHHhhHHH--------HHhcCchhhhhhhhhccc
Confidence 999999986 34444455555544433222 478999999999999999
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+ |||||||||+|||+++..|.|++|||.||+||..+.++|..+|.+++. ++|+|+.. |+..+.-.+|.|+++++|
T Consensus 674 k-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ILvi~~G 748 (790)
T KOG0056|consen 674 K-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADLILVISNG 748 (790)
T ss_pred c-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccEEEEEeCC
Confidence 7 999999999999999999999999999999999999999999999875 67777743 345677789999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+|++.|.++|++.
T Consensus 749 ~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 749 RIVERGRHEELLK 761 (790)
T ss_pred eEeecCcHHHHHh
Confidence 9999999999875
No 90
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1e-38 Score=327.32 Aligned_cols=207 Identities=25% Similarity=0.353 Sum_probs=183.7
Q ss_pred CCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccc----cceEEEeecCCCC
Q 046196 860 PDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETF----ARISGYCEQTDIH 935 (1436)
Q Consensus 860 ~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~----~~~~gyv~q~~~~ 935 (1436)
++++++++++||+.+++||++||+|||||||||.+.++.|... +.+|+|.+||.+++.... +.-+||+||+...
T Consensus 13 ~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SI 90 (243)
T COG1137 13 SYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASI 90 (243)
T ss_pred hhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchH
Confidence 3456789999999999999999999999999999999999987 579999999999865332 2348999999999
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 046196 936 SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1015 (1436)
Q Consensus 936 ~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlD 1015 (1436)
|..+||+||+......+.. +....+++...+++++.+++.++++... ..||||||||+.|||||+.+|+.++||
T Consensus 91 Fr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLD 164 (243)
T COG1137 91 FRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLD 164 (243)
T ss_pred hhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEec
Confidence 9999999999877666532 2233466667889999999999999873 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||++|+||-+...|+++++.+++.|..|++|-|... +....+||.+++.+ |+++..|.+
T Consensus 165 EPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 165 EPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred CCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 999999999999999999999999999999999987 78999999999997 799999975
No 91
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=369.43 Aligned_cols=206 Identities=26% Similarity=0.368 Sum_probs=178.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+++++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 45999999999999999999999999999999999999998 9999999998876544 3679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+..+.. + .+....++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------K------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 99999986532210 0 011234567899999988776554 56
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++||||||||+||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999986533 56677789999999999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 92
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-37 Score=367.89 Aligned_cols=214 Identities=27% Similarity=0.397 Sum_probs=187.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 477888877652 2458999999999999999999999999999999999987 5799999999886
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...+|.+||++|+..++|++||+||+.|....+ ..+.++.++.++++++.++|.++.+.. +.+||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 223577999999999999999999999986543 234455667789999999999888765 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68899999999996 78999997
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 5
No 93
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=367.84 Aligned_cols=214 Identities=26% Similarity=0.399 Sum_probs=185.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888876651 12458999999999999999999999999999999999987 57999999998864
Q ss_pred c-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 919 Q-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 919 ~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
. ...++.+|||+|+..++|++||+||+.|....+ ..+..+..+.++++++.++|.+..+.. ++.|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRK-----PRELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHH
Confidence 3 223467999999999999999999999986543 234455566789999999999888776 4579999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 68899999999985 799999985
No 94
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=365.68 Aligned_cols=214 Identities=25% Similarity=0.402 Sum_probs=187.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 578889887652 2458999999999999999999999999999999999987 5799999999887
Q ss_pred Ccc-cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQE-TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
... ..++.+|||+|+..++|++||+||+.|....+ ..+.++.+++++++++.+++.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 532 23467999999999999999999999987543 234455667889999999999887765 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68899999999996 78999997
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 5
No 95
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.8e-37 Score=363.52 Aligned_cols=215 Identities=26% Similarity=0.376 Sum_probs=186.0
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999887652 3459999999999999999999999999999999999987 569999999988
Q ss_pred CCc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 917 KNQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 917 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
+.. ...++.+||++|+..+++.+||+|++.+.+.+.. .+..+..+.++++++.++|.+..++.+ ++||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999997665432 223334456788999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||+|++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999986 67889999999996 7999999
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 85
No 96
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.8e-37 Score=364.39 Aligned_cols=208 Identities=20% Similarity=0.309 Sum_probs=179.2
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDL 238 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~ 238 (1436)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999998 9999999998876543 457999999999
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
+++++||+||+.|+.+..+... .+....+..+++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865433210 011224566789999987776554
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
..|||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+.. +.+|+.++|+..++..++|+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999886533 4566668999999999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 046196 399 LLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~ 416 (1436)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 97
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-38 Score=396.41 Aligned_cols=226 Identities=24% Similarity=0.418 Sum_probs=196.5
Q ss_pred ceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHH
Q 046196 118 TIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLL 197 (1436)
Q Consensus 118 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 197 (1436)
..+|+|+|+++.+. ++ +..+||+|+|++|++|+.+||||||||||||.+
T Consensus 985 ~G~I~~~~V~F~YP------------------------------sR-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI 1033 (1228)
T KOG0055|consen 985 KGDIEFRNVSFAYP------------------------------TR-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVI 1033 (1228)
T ss_pred eeEEEEeeeEeeCC------------------------------CC-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHH
Confidence 46799999998862 22 345699999999999999999999999999999
Q ss_pred HHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHH
Q 046196 198 LALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKA 274 (1436)
Q Consensus 198 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 274 (1436)
.+|-.+++|+ +|+|.++|+++++++.+ +++|.|+|+|.+| +.|+||||.||.+
T Consensus 1034 ~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF-~~TIrENI~YG~~-------------------- 1089 (1228)
T KOG0055|consen 1034 SLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLF-NGTIRENIAYGSE-------------------- 1089 (1228)
T ss_pred HHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCchhh-cccHHHHHhccCC--------------------
Confidence 9999999998 99999999999988764 6899999999966 5599999999821
Q ss_pred ccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCC
Q 046196 275 ANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEIST 354 (1436)
Q Consensus 275 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEpts 354 (1436)
+.+++++++|+..++.+.. +.+||+++||.||+++. .||||||||++||||+++||+||||||.||
T Consensus 1090 -----~vs~~eIi~Aak~ANaH~F--------I~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATS 1155 (1228)
T KOG0055|consen 1090 -----EVSEEEIIEAAKLANAHNF--------ISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATS 1155 (1228)
T ss_pred -----CCCHHHHHHHHHHhhhHHH--------HhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccch
Confidence 1244667777777776655 56899999999999887 599999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHH
Q 046196 355 GLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 355 gLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~ 416 (1436)
+||+++.+-+.+.|.+.. .++|+|+. .|+..+...+|.|+|+++|+|+++|++++++.
T Consensus 1156 ALDseSErvVQeALd~a~--~gRT~IvI--AHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1156 ALDSESERVVQEALDRAM--EGRTTIVI--AHRLSTIQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred hhhhhhHHHHHHHHHHhh--cCCcEEEE--ecchhhhhcCCEEEEEECCEEEecccHHHHHh
Confidence 999999999999999864 36677763 34567899999999999999999999999976
No 98
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.9e-37 Score=358.04 Aligned_cols=206 Identities=27% Similarity=0.375 Sum_probs=177.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|.++..+... .+....++.+++.+||.+..++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998655432110 0011234667899999988887765
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|...++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999854 35667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 99
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-37 Score=314.18 Aligned_cols=201 Identities=22% Similarity=0.343 Sum_probs=174.1
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc-ceEEEecCCCCcCCCCCHHHHHH
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ-RTSAYISQNDLHIGEMTVRETLA 250 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1436)
.+++.|.+||++||+||||||||||||+|+|+..|. +|+|.+||++.....|. |-++.++|+..+|..+||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 578899999999999999999999999999999998 99999999998876664 77999999999999999999999
Q ss_pred hhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 046196 251 FSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQ 330 (1436)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 330 (1436)
+|..- +- ++. .+....++.++..+||..+.+..- ..|||||
T Consensus 94 LGl~P---~L------kL~-------------------------a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGq 134 (231)
T COG3840 94 LGLSP---GL------KLN-------------------------AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQ 134 (231)
T ss_pred ccCCc---cc------ccC-------------------------HHHHHHHHHHHHHhChhhHhhhCc-----cccCchH
Confidence 87421 10 011 112345677899999999887554 4699999
Q ss_pred hhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecC
Q 046196 331 RKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGP 410 (1436)
Q Consensus 331 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 410 (1436)
||||++||+|+.+.+||+||||+|+||+.-+.+....+.+++... +.|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999988765 4555567888899999999999999999999999
Q ss_pred hhHHH
Q 046196 411 RENVL 415 (1436)
Q Consensus 411 ~~~~~ 415 (1436)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98775
No 100
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.5e-37 Score=365.12 Aligned_cols=218 Identities=27% Similarity=0.386 Sum_probs=184.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998865544 4679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+..+.. + .+....++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------A------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 99999986532210 0 011224567899999988777554 56
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 55666689999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCCHHHHH
Q 046196 406 VYQGPRENVLEFFERMGFKCPERKGVADFL 435 (1436)
Q Consensus 406 v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 435 (1436)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998743 45444445554
No 101
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.8e-37 Score=316.25 Aligned_cols=208 Identities=25% Similarity=0.356 Sum_probs=180.4
Q ss_pred ccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEE
Q 046196 159 VLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAY 232 (1436)
Q Consensus 159 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~y 232 (1436)
+++.|.....+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|++|.
T Consensus 7 V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGv 83 (223)
T COG2884 7 VSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGV 83 (223)
T ss_pred hhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeee
Confidence 3344555566999999999999999999999999999999999999998 9999999999875542 478999
Q ss_pred ecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc
Q 046196 233 ISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV 312 (1436)
Q Consensus 233 v~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 312 (1436)
|+|+..+++..||.||++|+.+..|..+ .+.+.++..+|+..||.+
T Consensus 84 VFQD~rLL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~ 129 (223)
T COG2884 84 VFQDFRLLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKH 129 (223)
T ss_pred EeeeccccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccch
Confidence 9999999999999999999988766432 122345677899999998
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHH
Q 046196 313 CADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYE 392 (1436)
Q Consensus 313 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 392 (1436)
.++. .+..|||||||||+||||++.+|++|+-||||-.||+.++..|++.+.++.+ .||+|++.+|+..-+..
T Consensus 130 k~~~-----lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~ 202 (223)
T COG2884 130 KARA-----LPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNR 202 (223)
T ss_pred hhhc-----CccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHh
Confidence 8764 4567999999999999999999999999999999999999999999999865 47888888999888888
Q ss_pred hcccEEEecCCeEEEecC
Q 046196 393 LFDDLILLSDGQIVYQGP 410 (1436)
Q Consensus 393 ~~D~iivL~~G~iv~~G~ 410 (1436)
+--+++.|++|+++....
T Consensus 203 ~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 203 MRHRVLALEDGRLVRDES 220 (223)
T ss_pred ccCcEEEEeCCEEEeccc
Confidence 888999999999987643
No 102
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.3e-37 Score=365.02 Aligned_cols=214 Identities=26% Similarity=0.353 Sum_probs=186.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCcee--EEEEECCc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVS--GSITISGY 915 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 915 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 477888887653 2358999999999999999999999999999999999987 567 99999998
Q ss_pred cCCc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 916 PKNQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 916 ~~~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
++.. ...++.+||++|+..++|++||+||+.|....+ ..+.++.+++++++++.++|.+..++. ++.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~-----~~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHL-----PAQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCC-----hhhCCHH
Confidence 8643 223567999999999999999999999986543 234455566789999999999888876 4589999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|+|++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 67889999999986 79999
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9975
No 103
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.6e-37 Score=360.81 Aligned_cols=202 Identities=28% Similarity=0.396 Sum_probs=176.6
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCc
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lT 940 (1436)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3469999999999999999999999999999999999987 579999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1020 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsg 1020 (1436)
|+|++.+.+.++. .+..+..+.++++++.++|.+..++.+ +.|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 223344556889999999988777654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1021 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1021 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 67788999999996 789999975
No 104
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-37 Score=341.90 Aligned_cols=199 Identities=31% Similarity=0.426 Sum_probs=169.3
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc-cccceEEEeecCCCCCCCCcHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE-TFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 459999999999999999999999999999999999876 5699999999876432 2345689999998888999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
|++.+..... ....+...+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRY-----PHELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765332 122333445678899999998776665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1023 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999876 4899999999976 57788999999996 6776654
No 105
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.5e-37 Score=392.44 Aligned_cols=206 Identities=26% Similarity=0.393 Sum_probs=171.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|++++| +.|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HGT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-CcC
Confidence 5899999999999999999999999999999999999 86 8999999999887654 46799999999866 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++. |+.+.+++.+++...+.+.. +-.|+++.||.||+++.
T Consensus 439 I~eNI~~g~-------------------------~~~~~eei~~al~~a~l~~~--------i~~lp~G~dT~vge~G~- 484 (588)
T PRK11174 439 LRDNVLLGN-------------------------PDASDEQLQQALENAWVSEF--------LPLLPQGLDTPIGDQAA- 484 (588)
T ss_pred HHHHhhcCC-------------------------CCCCHHHHHHHHHHhCHHHH--------HHhcccccccccccCCC-
Confidence 999999862 22233444445444333221 23478889999998754
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+|+ ++|.. ++...+|+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIi-ItHrl-~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLM-VTHQL-EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCh-HHHHhCCEEEEEeCCe
Confidence 699999999999999999999999999999999999999999998863 2445444 56654 6678899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++++
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999999874
No 106
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.4e-37 Score=342.41 Aligned_cols=207 Identities=25% Similarity=0.327 Sum_probs=173.9
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567788776521 11359999999999999999999999999999999999876 56899999998763
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ..++.++|++|++.+++.+||.||+.+....+. ...++..+.++++++.+++.+..+.. +..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHAL-----PMQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 134679999999999999999999988754331 22333445678999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 566789999999864
No 107
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=341.91 Aligned_cols=215 Identities=24% Similarity=0.343 Sum_probs=188.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.+.++|++|.++. +..+|+|+|+.|++||.++|+|+||||||||+++|+|..+ +.+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeec
Confidence 3678888887631 1469999999999999999999999999999999999988 5689999999986
Q ss_pred C----cccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 918 N----QETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 918 ~----~~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
. ...+++.+|||+|++. .+..-||.|.+.|+.... ..+.++.+++++++++.+++.+.++.. +..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccC
Confidence 5 3456788999999964 456789999999986543 345566788899999999999988775 46899
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
|||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |+|||++|||.+ .+.+.+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 689999999976 57788999999996 7899
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99974
No 108
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.5e-37 Score=363.21 Aligned_cols=214 Identities=24% Similarity=0.351 Sum_probs=186.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999887653 2458999999999999999999999999999999999987 5799999999886
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...++.+||++|+..++|++||+||+.|+...+ ..+..+.++.++++++.++|.+..+.. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 223567999999999999999999999976533 233445566789999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68889999999996 79999987
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 109
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.2e-37 Score=361.80 Aligned_cols=216 Identities=26% Similarity=0.405 Sum_probs=184.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66778776652 2459999999999999999999999999999999999987 56999999998864
Q ss_pred cc-cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 919 QE-TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 919 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ..++.+||++|+..++|++||+||+.|....... ...+.++..++++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 32 2346799999999999999999999987653211 1223445566789999999998877765 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998766 899999999986 68889999999996 79999997
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-37 Score=326.19 Aligned_cols=205 Identities=26% Similarity=0.308 Sum_probs=175.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc----ccceEEEecCCC--CcCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV----PQRTSAYISQND--LHIG 241 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~--~~~~ 241 (1436)
++|+|||++|.+||..+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+|++ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998765542 246789999995 6788
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
..||++.|.=+.+..+..+ ...++.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----hc
Confidence 8999999876554322111 1112567899999986432 46
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.+..|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+. .+.+++.++|+..-+..+||||+||+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeee
Confidence 67789999999999999999999999999999999999999999999998764 45677779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999999864
No 111
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.1e-35 Score=374.02 Aligned_cols=217 Identities=29% Similarity=0.452 Sum_probs=177.1
Q ss_pred cCCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEE
Q 046196 832 LPFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSIT 911 (1436)
Q Consensus 832 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~ 911 (1436)
.|.-...++|+|++|+++. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|+.+ |.+|+|+
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 3444568999999998852 22369999999999999999999999999999999999988 5799999
Q ss_pred ECCccCC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCC-------cccccc
Q 046196 912 ISGYPKN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVEL-------NPIREA 981 (1436)
Q Consensus 912 i~g~~~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l-------~~~~~~ 981 (1436)
+||.+++ ...+++.+|||+|++.++ +-|++||+.++. | ..+.++ +.++++.-|. ..-.++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~----p-~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN----P-EATDEE----IIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC----C-CCCHHH----HHHHHHHhCcHHHHHhccccccc
Confidence 9999864 456789999999998876 469999998643 2 222222 2222222222 222345
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeE
Q 046196 982 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDEL 1061 (1436)
Q Consensus 982 ~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v 1061 (1436)
.+|. ++.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ .+..+|+|
T Consensus 602 ~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred cccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 5554 356899999999999999999999999999999999999999999999975 4799999999975 78899999
Q ss_pred EEEecCcEEEEEcCC
Q 046196 1062 LLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1062 ~~l~~Gg~~~y~G~~ 1076 (1436)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99995 799999986
No 112
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=359.20 Aligned_cols=210 Identities=26% Similarity=0.355 Sum_probs=177.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999998865443 3679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+....... ... .+....++.+++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PNA------------------------AAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccC------CCH------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 9999998643210000 000 011234567899999987776544 56
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+. .+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 355667789999999999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 113
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-37 Score=338.88 Aligned_cols=198 Identities=26% Similarity=0.432 Sum_probs=170.1
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYE 943 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 943 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..++.++|++|+..+++.+|++|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 358999999999999999999999999999999999876 579999999987643 34567999999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 046196 944 SLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1023 (1436)
Q Consensus 944 ~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~ 1023 (1436)
|+.+....+. ....+..+.++++++.+++.+..++. +..||||||||++||++|+.+|++++|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988654432 22333445678899999998766654 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1024 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1024 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999998877899999999976 56778999999986 6776654
No 114
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=342.72 Aligned_cols=207 Identities=28% Similarity=0.376 Sum_probs=172.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 35999999999999999999999999999999999999997 999999998875432 235699999999889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++.+.... ... .+....++.+++.+||++..++.+
T Consensus 90 ~~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (235)
T cd03261 90 DSLTVFENVAFPLREHTR---------LSE------------------------EEIREIVLEKLEAVGLRGAEDLYP-- 134 (235)
T ss_pred CCCcHHHHHHHHHhhccC---------CCH------------------------HHHHHHHHHHHHHcCCchhhcCCh--
Confidence 999999999886432100 000 001123456788999987666555
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.++||+|++|
T Consensus 135 ---~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 135 ---AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEE
Confidence 469999999999999999999999999999999999999999999997643 2456666889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988763
No 115
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=339.82 Aligned_cols=200 Identities=28% Similarity=0.391 Sum_probs=171.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYE 943 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 943 (1436)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999876 569999999987642 3467999999998888999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 046196 944 SLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1023 (1436)
Q Consensus 944 ~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~ 1023 (1436)
|+.+....+. ...+...+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAY-----PHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654331 22333445678999999998766665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEec-CcEEEEEcCC
Q 046196 1024 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKR-GGEEIYVGPL 1076 (1436)
Q Consensus 1024 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-Gg~~~y~G~~ 1076 (1436)
.++..+.+.|+++.+ .|+|||+++|+++ ++...+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 57788999999995 4788887764
No 116
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.6e-37 Score=356.17 Aligned_cols=214 Identities=25% Similarity=0.367 Sum_probs=182.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888877652 2459999999999999999999999999999999999886 5699999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046196 918 NQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGq 995 (1436)
.. ...++.+||++|+..+++.+||+|++.+.+... ..+..+..+.++++++.+++.+..++.+ +.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 223567999999999999999999998755432 1223333456788999999988777654 5799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57788999999986 78999997
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 117
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.1e-37 Score=389.74 Aligned_cols=225 Identities=28% Similarity=0.441 Sum_probs=187.4
Q ss_pred CceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHH
Q 046196 117 PTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTL 196 (1436)
Q Consensus 117 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 196 (1436)
+..+++|+|+++.++. ++++|+|+|++++|||.+||+||||||||||
T Consensus 325 ~~~~I~f~~vsf~y~~---------------------------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl 371 (567)
T COG1132 325 TIGSIEFENVSFSYPG---------------------------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTL 371 (567)
T ss_pred CCCeEEEEEEEEEcCC---------------------------------CCccccCceEEEcCCCEEEEECCCCCCHHHH
Confidence 4467999999988631 3459999999999999999999999999999
Q ss_pred HHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHH
Q 046196 197 LLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREK 273 (1436)
Q Consensus 197 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~ 273 (1436)
+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|. .||+|||.++.
T Consensus 372 ~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-------------------- 427 (567)
T COG1132 372 IKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-------------------- 427 (567)
T ss_pred HHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC--------------------
Confidence 99999999997 9999999999987765 478999999988776 79999999973
Q ss_pred HccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCC
Q 046196 274 AANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEIS 353 (1436)
Q Consensus 274 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEpt 353 (1436)
|+.+.|++.++++..+.++. +..|+++.||.||+++. +||||||||++||||++.+|+||+|||||
T Consensus 428 -----~~at~eei~~a~k~a~~~d~--------I~~lp~g~dt~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaT 493 (567)
T COG1132 428 -----PDATDEEIEEALKLANAHEF--------IANLPDGYDTIVGERGV-NLSGGQRQRLAIARALLRNPPILILDEAT 493 (567)
T ss_pred -----CCCCHHHHHHHHHHhChHHH--------HHhCcccccceecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccc
Confidence 22333555555554433222 23468899999996655 69999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHH
Q 046196 354 TGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 354 sgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~ 416 (1436)
|+||+.+...|.+.++++.+ ++|+++ +.|.. .+...+|+|++|++|+++++|+++|++.
T Consensus 494 SalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRl-sti~~aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 494 SALDTETEALIQDALKKLLK--GRTTLI-IAHRL-STIKNADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred cccCHHhHHHHHHHHHHHhc--CCEEEE-EeccH-hHHHhCCEEEEEECCEEEEecCHHHHHH
Confidence 99999999999999997643 456666 66655 4555699999999999999999999976
No 118
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=340.04 Aligned_cols=201 Identities=30% Similarity=0.396 Sum_probs=172.4
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 459999999999999999999999999999999999876 569999999987532 2234578999999989999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+|++.+....+. ...++..+.++++++.+++.+..++. +..||||||||++||+||+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr~~la~al~~~p~llllDEPt~~L 162 (220)
T cd03265 91 WENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRL-----VKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGL 162 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 999988654431 22333445678999999998776665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 163 DPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999876 899999999986 57788999999986 688888764
No 119
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-36 Score=338.32 Aligned_cols=210 Identities=26% Similarity=0.404 Sum_probs=176.1
Q ss_pred EEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc
Q 046196 840 TFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ 919 (1436)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 919 (1436)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 4667766542 2358999999999999999999999999999999999876 569999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046196 920 E-TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKR 998 (1436)
Q Consensus 920 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqR 998 (1436)
. ..++.++|++|++.+++..|++||+.+....+ ....++..+.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRK-----PKQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCC-----hhhCCHHHHHH
Confidence 2 22356999999998888999999998765432 122344455678899999998776665 35799999999
Q ss_pred HHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 999 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 999 l~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999975 57778999999986 6777765
No 120
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-36 Score=349.64 Aligned_cols=205 Identities=19% Similarity=0.228 Sum_probs=154.9
Q ss_pred CCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECC
Q 046196 835 EPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISG 914 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 914 (1436)
.+..+.+.++.+.++. +.-+++.+++..++.-..++++|+||+||||+++++.|... +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 3456888888766531 11268999999999999999999999999999999999766 4578776654
Q ss_pred ccCCcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 915 YPKNQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 915 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
+++++|-.|..+-+-++.|-+- .+....+ |. ...+ ..++-+..+||..-. +-. .+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~-pG-~~~e----e~r~hl~~~Gl~g~l---a~~-si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF-PG-KTEE----EIRRHLGSFGLSGEL---ALQ-SIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC-CC-CCHH----HHHHHHHhcCCCchh---hhc-cccccCCc
Confidence 3568899987655444555432 2333332 22 2222 246778888887422 111 25689999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||-||.+|.....+|.+|+|||||+.||-.+-..+.+.|++. +..||++||+.+ -+-..|+++++.++|...-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999986 457999999965 3667899999999876555566
Q ss_pred C
Q 046196 1075 P 1075 (1436)
Q Consensus 1075 ~ 1075 (1436)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 4
No 121
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-36 Score=359.59 Aligned_cols=202 Identities=25% Similarity=0.312 Sum_probs=177.6
Q ss_pred cccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---cc----cceEEEeecCCCC
Q 046196 863 RLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---TF----ARISGYCEQTDIH 935 (1436)
Q Consensus 863 ~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~q~~~~ 935 (1436)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999987 5799999999887532 22 5679999999999
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 046196 936 SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1015 (1436)
Q Consensus 936 ~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlD 1015 (1436)
+|++||+||+.|...+. ..+.+++.+++.++++.++|.+..+.. +..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 234455667789999999998877765 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||++||+.++..+++.++++.++ |+|||++||+++ ++...+|+|++|++ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999998754 899999999976 57889999999986 789999974
No 122
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.1e-37 Score=311.40 Aligned_cols=196 Identities=28% Similarity=0.338 Sum_probs=172.5
Q ss_pred cceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-ccccceEEEeecCCCCCCCCcHHHHHHH
Q 046196 869 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-ETFARISGYCEQTDIHSPHVTVYESLVY 947 (1436)
Q Consensus 869 ~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~ 947 (1436)
..++.|.+||++||+||||||||||||+|+|... |.+|+|+|||.+... ....|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 3678999999999999999999999999999987 579999999998654 3345668999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 046196 948 SAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1027 (1436)
Q Consensus 948 ~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~ 1027 (1436)
+.. |.-.-..+.+++++.++..+||..+.+.+. ..|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 542 211113445667899999999999988874 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1028 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1028 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
.+..++.+++++ +.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999854 899999999997 78999999999997 799999985
No 123
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-37 Score=329.42 Aligned_cols=224 Identities=26% Similarity=0.365 Sum_probs=188.7
Q ss_pred CCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc----ceEEEecCCC
Q 046196 162 SRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ----RTSAYISQND 237 (1436)
Q Consensus 162 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~~ 237 (1436)
++....++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++..+|..
T Consensus 12 k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~ 88 (250)
T COG0411 12 KRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQIT 88 (250)
T ss_pred eecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccc
Confidence 3446678999999999999999999999999999999999999998 99999999999887765 3478889999
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
.+|++|||.||+..+...+.. +...... +.. .-+..+.......+|+.+||.+.+|+.
T Consensus 89 rlF~~lTVlENv~va~~~~~~---~~~~l~~----------~~~---------~~~e~~~~e~A~~~Le~vgL~~~a~~~ 146 (250)
T COG0411 89 RLFPGLTVLENVAVGAHARLG---LSGLLGR----------PRA---------RKEEREARERARELLEFVGLGELADRP 146 (250)
T ss_pred cccCCCcHHHHHHHHhhhhhh---hhhhhcc----------ccc---------hhhHHHHHHHHHHHHHHcCCchhhcch
Confidence 999999999999988654321 0000000 000 001112234456789999999999998
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
.|+ ||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ ..+.+|+.+-|++.-++.+||||
T Consensus 147 A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri 220 (250)
T COG0411 147 AGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRI 220 (250)
T ss_pred hhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEE
Confidence 875 999999999999999999999999999999999999999999999865 35678888999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 046196 398 ILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~ 416 (1436)
+||+.|+++.+|+++++.+
T Consensus 221 ~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 221 VVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred EeccCCcCcccCCHHHHhc
Confidence 9999999999999999864
No 124
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-36 Score=342.87 Aligned_cols=204 Identities=28% Similarity=0.375 Sum_probs=172.5
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---c-ccceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---T-FARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 358999999999999999999999999999999999976 5689999999876432 1 234589999999999999
Q ss_pred cHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 046196 940 TVYESLVYSAWLRLPPE-------VDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSII 1012 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~-------~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~il 1012 (1436)
||+|++.+......... ....+..+.++++++.+++.+..+.. ++.||||||||++||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988754321110 01233445678999999998766654 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1013 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1013 llDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999998877899999999986 57788999999986 788888874
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-37 Score=325.73 Aligned_cols=216 Identities=26% Similarity=0.347 Sum_probs=177.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++.+|++..+.... ....+|+|||++|.+||++||+|+||||||||.++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 467788776653211 11259999999999999999999999999999999999987 5799999999876
Q ss_pred Ccc----cccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 046196 918 NQE----TFARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGVSG 990 (1436)
Q Consensus 918 ~~~----~~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~ 990 (1436)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++.+ +++.++++.+||.+- .+.. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 443 35678999999974 67999999988644322 2233332 338999999999753 3332 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
||||||||++|||||+.+|++|++|||||+||+..+..|+++|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 789999999976 47779999999997 79
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..+|.
T Consensus 220 ivE~~~~ 226 (252)
T COG1124 220 IVEIGPT 226 (252)
T ss_pred EEEeech
Confidence 9999986
No 126
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=359.43 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=183.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. ..++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678887766310 112469999999999999999999999999999999999987 56999999998864
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ..++.+||++|+..+++.+||+||+.+....+ ..+..+.++.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 23467999999999999999999999875443 123344456688999999998777665 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999986 7899
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99874
No 127
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=359.63 Aligned_cols=207 Identities=23% Similarity=0.339 Sum_probs=178.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.+|||+|+..+++.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998865443 4679999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
.||+.|+.+..+.. + .+....++.+++.+||.+..+.. +++
T Consensus 109 ~eNi~~~l~~~~~~----------~------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------K------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQ 149 (377)
T ss_pred HHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 99999986532210 0 01122456789999998766644 457
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++|||||||++||..++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999886544 46666689999999999999999999999
Q ss_pred EEecChhHHHH
Q 046196 406 VYQGPRENVLE 416 (1436)
Q Consensus 406 v~~G~~~~~~~ 416 (1436)
+..|+++++.+
T Consensus 229 ~~~g~~~~~~~ 239 (377)
T PRK11607 229 VQIGEPEEIYE 239 (377)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 128
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.6e-36 Score=341.72 Aligned_cols=201 Identities=26% Similarity=0.364 Sum_probs=172.3
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---c-ccceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---T-FARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 459999999999999999999999999999999999986 5689999999875321 1 234689999999999999
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 046196 940 TVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1019 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTs 1019 (1436)
||+||+.+....+. ....+..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 162 (232)
T cd03218 91 TVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGERRRVEIARALATNPKFLLLDEPFA 162 (232)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999987643321 22233445678899999998766655 45799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1020 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1020 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 217 (232)
T cd03218 163 GVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTP 217 (232)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCH
Confidence 99999999999999999877899999999986 68889999999986 788888875
No 129
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=360.14 Aligned_cols=214 Identities=24% Similarity=0.374 Sum_probs=186.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588899887652 2358999999999999999999999999999999999987 5699999999886
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...++.+||++|+..++|++||.||+.|....+ ..+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234577999999999999999999999876543 233455566789999999999887765 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ .|.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999999865 4899999999986 68899999999996 79999998
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 130
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-36 Score=359.52 Aligned_cols=206 Identities=25% Similarity=0.390 Sum_probs=176.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998865433 3579999999999999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.|+.+..+.. . .+....++.+++.+||++..++.+ ..
T Consensus 93 ~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------K------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 99999976432210 0 001124566889999987776554 46
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 45666689999999999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 131
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.5e-36 Score=338.58 Aligned_cols=215 Identities=28% Similarity=0.438 Sum_probs=178.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4677777665310 011259999999999999999999999999999999999876 56999999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 919 Q--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 919 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
. ..+++.++|++|++.+++.+||+||+.+....+ ....++..+.++++++.+++.+..+.. ++.||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 234567999999998999999999998765433 122334456678999999998776665 357999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++...+|++++|++ |+++..|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999976 57788999999986 6776543
No 132
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=361.46 Aligned_cols=214 Identities=26% Similarity=0.390 Sum_probs=183.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888877652 2458999999999999999999999999999999999987 5699999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQ-ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...++.+||++|+..+++.+||+||+.|....+ ..+.++..+.++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~-----~~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRK-----PKALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHH
Confidence 43 123467999999999999999999999876543 123344556789999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67889999999996 78999887
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 133
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.9e-36 Score=353.58 Aligned_cols=206 Identities=26% Similarity=0.368 Sum_probs=176.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
+++|+|+|++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 1356999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+.++..+... .+....++.+++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998755432110 0011235668999999987776664
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE--EGVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 35667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998765
No 134
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-36 Score=359.36 Aligned_cols=206 Identities=31% Similarity=0.475 Sum_probs=169.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+..+ +++++||+|++.++ ..|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-ccc
Confidence 6899999999999999999999999999999999999998 9999999999877664 57899999999855 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
+||||.++.. +.+.+++.++....+ +.+.+.-+++.||.+|+.+ +
T Consensus 411 ireNi~l~~~-------------------------~~s~e~i~~al~~a~---------l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARP-------------------------DASDEEIIAALDQAG---------LLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCC-------------------------cCCHHHHHHHHHHhc---------HHHhhcCCCcccchhccCC-C
Confidence 9999999732 222222333222211 2233333668899999765 5
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+|||||+|||++|||++++++++++||||++||.+|+..|.+.|.++++ ++| ++.++|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~kt-vl~itHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKT-VLVITHR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCe-EEEEEcC-hHHHhcCCEEEEecCCc
Confidence 7999999999999999999999999999999999999999999999865 344 4445554 46677899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999864
No 135
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.1e-36 Score=353.62 Aligned_cols=206 Identities=28% Similarity=0.375 Sum_probs=176.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999999899999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|.....+... . +....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------R------------------------EIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987554332100 0 011234567889999988887765
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. .+++|+.++|+..++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 35667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 136
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-36 Score=338.45 Aligned_cols=192 Identities=31% Similarity=0.444 Sum_probs=164.5
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCccc-------ccceEEEeecCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQET-------FARISGYCEQTDIHS 936 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~-------~~~~~gyv~q~~~~~ 936 (1436)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 469999999999999999999999999999999999986 56999999998764311 235699999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 046196 937 PHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1016 (1436)
Q Consensus 937 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDE 1016 (1436)
+.+||+|++.+....+. ....+..+.++++++.+++.+..+.. ++.||||||||++||++|+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998764431 22233445678999999998776655 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1017 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1017 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++|
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 9999999999999999999976 5899999999976 34 489999999874
No 137
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=340.88 Aligned_cols=217 Identities=27% Similarity=0.397 Sum_probs=179.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888877652 2459999999999999999999999999999999999876 5699999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046196 918 NQE-TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 918 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGq 995 (1436)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+..+.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHH
Confidence 432 2245689999999888899999999886543211 0012233345678899999998766655 35799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999765 899999999986 57788999999986 7888888
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 74
No 138
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=314.30 Aligned_cols=207 Identities=30% Similarity=0.459 Sum_probs=175.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~l 243 (1436)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|.+||++++.+.+. +..+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999887764 5679999998888889
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+|-+.+|..-.+.+. .| .++..+++..|...++.+.+.. ..
T Consensus 91 tv~eVV~mGr~p~~~g~-----------------~~---------------~e~~~i~~~ala~~d~~~la~R-----~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGR-----------------EP---------------EEDERIAAQALAATDLSGLAGR-----DY 133 (259)
T ss_pred EHHHHHHhcccccccCC-----------------Cc---------------hhhHHHHHHHHHHcChhhhhcc-----ch
Confidence 99999999864332111 00 0122345667777788776653 34
Q ss_pred ccCChhhhhHHHHHHHHhc------CCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 324 RGISGGQRKRLTTGEMLVG------PARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~------~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. +-.|+.+.|+.+-+..+||+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhee
Confidence 6799999999999999975 44699999999999999999999999999874 355666889999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999886
No 139
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.3e-36 Score=352.44 Aligned_cols=212 Identities=25% Similarity=0.377 Sum_probs=183.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+||++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 66777776652 2459999999999999999999999999999999999877 57999999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 919 Q--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 919 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..+.++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998776542 223344456789999999998877764 57999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999986 68889999999996 799999985
No 140
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=322.07 Aligned_cols=208 Identities=25% Similarity=0.396 Sum_probs=173.9
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc----ceEEEecCCCCcC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ----RTSAYISQNDLHI 240 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~~~~~ 240 (1436)
.+.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+. .-++||||....|
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 3467999999999999999999999999999999999999987 99999999999887664 4589999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhC-Cccccccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILG-LEVCADTMVG 319 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg 319 (1436)
++|||+|||..++....... . ...+ .|.+.+.+- |.+.++..-|
T Consensus 91 ~~LTVeENL~~g~~~~~~~~-----------~------~~~~------------------~e~v~~lFP~Lker~~~~aG 135 (237)
T COG0410 91 PRLTVEENLLLGAYARRDKE-----------A------QERD------------------LEEVYELFPRLKERRNQRAG 135 (237)
T ss_pred hhCcHHHHHhhhhhcccccc-----------c------cccc------------------HHHHHHHChhHHHHhcCccc
Confidence 99999999998754321000 0 0000 122333332 4444455544
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
.|||||||.++|||||+++|++|+|||||.||-|.-..+|++.++++.+. .+.+|+.+.|+...+.+++|+.+|
T Consensus 136 -----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yv 209 (237)
T COG0410 136 -----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYV 209 (237)
T ss_pred -----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEE
Confidence 49999999999999999999999999999999999999999999998753 457888899999999999999999
Q ss_pred ecCCeEEEecChhHHHH
Q 046196 400 LSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~~ 416 (1436)
|.+|+|++.|+.+++.+
T Consensus 210 le~Griv~~G~~~eL~~ 226 (237)
T COG0410 210 LENGRIVLSGTAAELLA 226 (237)
T ss_pred EeCCEEEEecCHHHHhc
Confidence 99999999999999864
No 141
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=346.94 Aligned_cols=204 Identities=25% Similarity=0.303 Sum_probs=173.6
Q ss_pred CccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---c----ccceEEEeecCC
Q 046196 861 DDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---T----FARISGYCEQTD 933 (1436)
Q Consensus 861 ~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~ 933 (1436)
++.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 445679999999999999999999999999999999999987 5689999999876421 1 135699999999
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 046196 934 IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1013 (1436)
Q Consensus 934 ~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~ill 1013 (1436)
.+++.+||+||+.+..... .....+..+.++++++.++|.+..++. +..||||||||++||+||+.+|++|+
T Consensus 112 ~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~lAral~~~p~ill 183 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKY-----PDELSGGMQQRVGLARALAVDPDILL 183 (269)
T ss_pred ccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999998865432 122333445678899999998777765 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 184 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 184 MDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999998754 899999999976 57788999999986 788888874
No 142
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.1e-37 Score=321.76 Aligned_cols=202 Identities=24% Similarity=0.406 Sum_probs=185.7
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcH
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+.+++|+||.++||+++|++|+|||||||++++|.|... +++|+|.++|.++++. .+.++||.|.+.-++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCcH
Confidence 56789999999999999999999999999999999999987 6799999999998754 35678999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
.|.|.|.|.++ .++.++.+...+.+|+.+++....... ++.||.|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 99999999887 456677777889999999999887776 4679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||.+.+.+.+.+.+++++|.|||+++|+++ .+.++||++++|++ |+.|.+|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999986 68899999999996 788899986
No 143
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.9e-36 Score=361.39 Aligned_cols=217 Identities=27% Similarity=0.370 Sum_probs=183.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 367888877652 3469999999999999999999999999999999999987 5799999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ..+++.+||++|+..+++.+||+|++.+........ .....+..+.++++++.+++.+..++. ++.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCH
Confidence 43 345677999999999989999999998754211100 101233445689999999999887765 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57789999999996 789999
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 221 G~~ 223 (402)
T PRK09536 221 GPP 223 (402)
T ss_pred cCH
Confidence 985
No 144
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.2e-36 Score=334.82 Aligned_cols=195 Identities=30% Similarity=0.408 Sum_probs=167.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-ccccceEEEeecCCCCCCCCcHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-ETFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
+.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 459999999999999999999999999999999999876 579999999987643 23345789999999889999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
||+.+....+. . ..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKK-----VKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99987654321 1 123468899999998776665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1023 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999998877899999999976 56678999999996 6777654
No 145
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=354.26 Aligned_cols=206 Identities=24% Similarity=0.339 Sum_probs=175.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~~~ 240 (1436)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999998 9999999998765432 35699999999989
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754332100 001123466789999987776554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 3566777899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 146
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.4e-36 Score=335.85 Aligned_cols=221 Identities=38% Similarity=0.627 Sum_probs=180.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC-CceeEEEEECCccC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYVSGSITISGYPK 917 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 917 (1436)
+.|+|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577887766311 0135699999999999999999999999999999999998751 24689999999887
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEE-VMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~-vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.....++.++|++|++.+++.+||+||+.+......+.....+.....+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544456779999999999999999999998765443222222222234455 88888888766654 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468899999999996 6887765
No 147
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.9e-36 Score=335.33 Aligned_cols=206 Identities=28% Similarity=0.360 Sum_probs=172.9
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46777776542 12359999999999999999999999999999999999876 56999999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. .+++.++|++|++.+++.+|+.||+.+....+. ...+...+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 234679999999988899999999988754321 22333445678899999998765554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999864
No 148
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.6e-36 Score=338.76 Aligned_cols=202 Identities=25% Similarity=0.309 Sum_probs=169.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCC-----CCCceeEEEEECCccCCc-----ccccceEEEeecCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYVSGSITISGYPKNQ-----ETFARISGYCEQTD 933 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~ 933 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|.. + +.+|+|.++|.++.. ...++.++|++|++
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 35999999999999999999999999999999999987 5 578999999987532 22456799999998
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 046196 934 IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1013 (1436)
Q Consensus 934 ~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~ill 1013 (1436)
.++ .+||+||+.+....+. ....++..+.++++++.+++.+..+.... +.+||||||||++||++|+.+|++|+
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 877 7999999988654331 11122234567889999999876555320 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.++..+++.|++++++ +|||+++|+++ .+...+|++++|++ |++++.|+.
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 99999999999999999999999876 99999999976 56778999999996 788888875
No 149
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=339.27 Aligned_cols=217 Identities=27% Similarity=0.341 Sum_probs=179.9
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677777655210 001269999999999999999999999999999999999987 56899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 124679999999999999999999988654331 22333445678899999998776654 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999976 56778999999986 7888
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 150
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-36 Score=341.84 Aligned_cols=204 Identities=29% Similarity=0.348 Sum_probs=170.4
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc------ccccceEEEeecCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ------ETFARISGYCEQTDIHSP 937 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~q~~~~~~ 937 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 459999999999999999999999999999999999876 568999999987642 123567999999999999
Q ss_pred CCcHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 046196 938 HVTVYESLVYSAWLRL-----PPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSII 1012 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~il 1012 (1436)
.+||+||+.+...... ......+...+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 00111123345678899999997766554 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1013 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1013 llDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999998764 899999999986 57778999999996 788888875
No 151
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-36 Score=339.33 Aligned_cols=214 Identities=22% Similarity=0.349 Sum_probs=179.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46777776542 2459999999999999999999999999999999999876 57999999998764
Q ss_pred c-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 919 Q-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 919 ~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
. ...++.++|++|+..+++.+||+|++.+...... ....++..+.++++++.+|+.+..+.. ++.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2235679999999988999999999987542111 123334455678999999998766654 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 56678999999986 789998
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 152
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.1e-36 Score=335.60 Aligned_cols=200 Identities=28% Similarity=0.417 Sum_probs=171.4
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 459999999999999999999999999999999999876 579999999987643 2345669999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+||+.+....+. ...++..+.++++++.++|.+..++. +..||+|||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654431 22333345678899999998766665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999875 599999999986 46678999999986 788888864
No 153
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4e-36 Score=334.29 Aligned_cols=193 Identities=27% Similarity=0.383 Sum_probs=165.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------cccceEEEeecCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------TFARISGYCEQTDIHSP 937 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~~~~~ 937 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 359999999999999999999999999999999999876 5699999999876421 23467999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1017 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEP 1017 (1436)
.+|++||+.+....+. ...++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754331 22333445678899999998766654 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1018 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1018 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
|+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++|
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999998777999999999975 466789999999864
No 154
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=335.05 Aligned_cols=217 Identities=25% Similarity=0.334 Sum_probs=178.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+... ...+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 47888988776310 011459999999999999999999999999999999999876 5799999999876
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046196 918 NQET------F-ARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSG 990 (1436)
Q Consensus 918 ~~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~ 990 (1436)
.... . ++.++|++|+..+++.+|++||+.+..... ....++.++.++++++.+++.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4311 1 256999999998899999999998865432 122334445688999999998766654 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 34 44689999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..||.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9888875
No 155
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=346.56 Aligned_cols=218 Identities=22% Similarity=0.321 Sum_probs=179.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. ....+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 6788887765310 0012459999999999999999999999999999999999987 56999999998864
Q ss_pred c-----ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 046196 919 Q-----ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN--PIREALVGLPGVSG 990 (1436)
Q Consensus 919 ~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~--~~~~~~~g~~~~~~ 990 (1436)
. ...++.+||++|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..++. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134567999999863 334579999998865432 234455556788999999996 455544 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 46678999999996 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999875
No 156
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.3e-37 Score=314.77 Aligned_cols=210 Identities=21% Similarity=0.363 Sum_probs=181.1
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc----ceEEEecCCCCcC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ----RTSAYISQNDLHI 240 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~~~~~ 240 (1436)
+++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++.+... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 3456999999999999999999999999999999999999999 99999999999876553 3489999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
-.+||+|||.-..+...... ...+.+...+.+|+.++|.++++..-.
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a~- 138 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKAY- 138 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCccc-
Confidence 99999999987654431100 001223456789999999999986543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
.||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.. .+.-|+..-|...|+...|||.+++
T Consensus 139 ----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 139 ----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 5999999999999999999999999999999999999999999998865 4566666789999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 046196 401 SDGQIVYQGPRENVLE 416 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~~ 416 (1436)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 157
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-36 Score=332.24 Aligned_cols=200 Identities=28% Similarity=0.433 Sum_probs=167.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 45999999999999999999999999999999999999987 9999999988754322 3569999999888889999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.++....+.. .. .....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KA------------------------EIRARVRELLELVGLEGLLNRYP-----HE 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 99998864321100 00 01123456788999987766555 45
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999997643 355666788999899999999999999999
Q ss_pred EEec
Q 046196 406 VYQG 409 (1436)
Q Consensus 406 v~~G 409 (1436)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 158
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.6e-36 Score=347.74 Aligned_cols=206 Identities=29% Similarity=0.388 Sum_probs=174.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999999988 999999998764322 2357999999998889999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+..+..+... . +....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------R------------------------EIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543221100 0 001124557889999888777664
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|++++. .+++|+.++|+..++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 35667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999998754
No 159
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=339.52 Aligned_cols=201 Identities=28% Similarity=0.397 Sum_probs=172.0
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCc
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lT 940 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 358999999999999999999999999999999999876 568999999987542 234567899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP--IREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
|+||+.+....+ ..+.++..+.++++++.+++.+ ..+.. ++.||||||||++||++|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999998765432 1233344556789999999985 55544 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999764 899999999986 57788999999996 788888874
No 160
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-36 Score=333.80 Aligned_cols=191 Identities=30% Similarity=0.394 Sum_probs=162.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCC-CCCCCcHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDI-HSPHVTVY 942 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~-~~~~lTv~ 942 (1436)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.....++.++|++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 459999999999999999999999999999999999876 579999999987644344567999999864 34567999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
||+.+..... . . ..+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 123578899999998777665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 1023 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999777999999999986 56678999999996 554
No 161
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.7e-36 Score=340.03 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=179.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888877652 2359999999999999999999999999999999999876 56899999998754
Q ss_pred c-----------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046196 919 Q-----------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPG 987 (1436)
Q Consensus 919 ~-----------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~ 987 (1436)
. ...++.++|++|++.+++..|++||+.+...... ....+...+.++++++.+++.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1234578999999988999999999987543211 122334455678899999998766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999976 57788999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 788888874
No 162
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-36 Score=332.52 Aligned_cols=205 Identities=29% Similarity=0.379 Sum_probs=172.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 35999999999999999999999999999999999999987 999999998764321 1356999999998899999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+..+..+.. . .+....++.+++.+||++..++.+ .
T Consensus 90 v~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (220)
T cd03265 90 GWENLYIHARLYGVP----------G------------------------AERRERIDELLDFVGLLEAADRLV-----K 130 (220)
T ss_pred HHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----h
Confidence 999999864432110 0 001123466789999987777655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+.+|+|++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 59999999999999999999999999999999999999999999998653 25567778999999999999999999999
Q ss_pred EEEecChhHH
Q 046196 405 IVYQGPRENV 414 (1436)
Q Consensus 405 iv~~G~~~~~ 414 (1436)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987754
No 163
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=343.66 Aligned_cols=222 Identities=24% Similarity=0.352 Sum_probs=179.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-------cccceEEEecCCC-Cc
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-------VPQRTSAYISQND-LH 239 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~-~~ 239 (1436)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 4999999999999999999999999999999999999998 99999999987521 1235699999985 34
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTMV 318 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 318 (1436)
+...||.||+.|+.+..+.. . .+....++.+++.+||. +..++
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------K------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 55579999999976433210 0 00112346678899996 34443
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
.++.||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. .+.+|++++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEE
Confidence 3457999999999999999999999999999999999999999999998754 35667778999999999999999
Q ss_pred EecCCeEEEecChhHHH---HHHHhcCCCCCCCCCHHH
Q 046196 399 LLSDGQIVYQGPRENVL---EFFERMGFKCPERKGVAD 433 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad 433 (1436)
+|++|+++++|+++++. +.++..|+.+|.....++
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~ 253 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFAD 253 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHH
Confidence 99999999999999875 345567777775444333
No 164
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5e-36 Score=335.45 Aligned_cols=199 Identities=30% Similarity=0.425 Sum_probs=167.7
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---c-ccceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---T-FARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|+..+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 358999999999999999999999999999999999987 5689999999876431 1 245699999999999999
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 940 TVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELV-ELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
|++||+.+...... ..+..+.++++++.+ ++.+..++. ++.||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122234466777777 466555544 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||+.++..+++.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999976 57788999999986 788888874
No 165
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-36 Score=339.21 Aligned_cols=212 Identities=26% Similarity=0.363 Sum_probs=177.7
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 46677766542 2458999999999999999999999999999999999876 56899999998764
Q ss_pred cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046196 919 QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKR 998 (1436)
Q Consensus 919 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqR 998 (1436)
. ..+.++|++|+..+++.+||.||+.+....+ .....+..+.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 2245799999998889999999998764432 122333445688999999998766654 45799999999
Q ss_pred HHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEec-CcEEEEEcCC
Q 046196 999 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKR-GGEEIYVGPL 1076 (1436)
Q Consensus 999 l~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-Gg~~~y~G~~ 1076 (1436)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ .+...+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999985 5888887764
No 166
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.9e-36 Score=386.33 Aligned_cols=205 Identities=30% Similarity=0.413 Sum_probs=169.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 35899999999999999999999999999999999999998 9999999999987665 46799999999866 56
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|++|||.++.. .+.+++.++++..+.+.. .-.|+++.||.+|+.+
T Consensus 542 TI~eNi~~~~~--------------------------~~~e~i~~al~~a~l~~~--------i~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP--------------------------LTLDEAWEAARMAGLAED--------IRAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC--------------------------CCHHHHHHHHHHcCcHHH--------HHhccccccccccCCC-
Confidence 99999998632 111223333333222211 2247888999999875
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
.+||||||||++||||++++|++|+||||||+||+.++.++.+.|++. ++|+ +.++|.. ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~-IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTR-IVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeE-EEEecCh-HHHHcCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999874 3444 4466654 667889999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 167
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-36 Score=323.49 Aligned_cols=207 Identities=27% Similarity=0.380 Sum_probs=180.8
Q ss_pred CccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCccc----ccceEEEeecCCCCC
Q 046196 861 DDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQET----FARISGYCEQTDIHS 936 (1436)
Q Consensus 861 ~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~ 936 (1436)
.+...+++|||+++++||++||+||||||||||+|+|+|.++ |++|+|.++|.++.... .+.-++.-+|...+|
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 356779999999999999999999999999999999999988 57999999999875422 234577889999999
Q ss_pred CCCcHHHHHHHHHHhc--------CCCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 046196 937 PHVTVYESLVYSAWLR--------LPPE-VDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVA 1007 (1436)
Q Consensus 937 ~~lTv~e~l~~~~~l~--------~~~~-~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~ 1007 (1436)
++|||.||+..++..+ .+.. ...++..+++.++++.+||.+.+|...| +||+||||||.|||||+.
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~ 166 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALAT 166 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhc
Confidence 9999999998875433 1211 1234556778899999999999999865 699999999999999999
Q ss_pred CCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1008 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1008 ~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.+ -++.+||||+||+. |+++..|++
T Consensus 167 ~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P 234 (250)
T COG0411 167 QPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTP 234 (250)
T ss_pred CCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCH
Confidence 99999999999999999999999999999874 699999999997 48999999999996 799999986
No 168
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=311.97 Aligned_cols=214 Identities=27% Similarity=0.419 Sum_probs=182.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
|+.+|++|+.. ++++|++||++++|||++||+||||||||||||+|+|... +.+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 56778888763 4679999999999999999999999999999999999887 56899999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCC--CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPE--VDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~--~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
. ..+++..+..+|+..+....||+|-+.++.. |.. ....+..+.++++|+..++.+++... ...|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~---p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRI---PHRSGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccc---ccccCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCc
Confidence 4 3456778999999988878999999998743 322 22224455678999999999887765 357999
Q ss_pred HHHHHHHHHHHHhh------CCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 994 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 994 GqrqRl~iA~aL~~------~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
||||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|+|++|.+
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~- 216 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ- 216 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-
Confidence 99999999999976 345899999999999999999999999999999999999999984 6778999999996
Q ss_pred cEEEEEcCCC
Q 046196 1068 GEEIYVGPLG 1077 (1436)
Q Consensus 1068 g~~~y~G~~~ 1077 (1436)
|+++..|++.
T Consensus 217 Grv~a~g~p~ 226 (259)
T COG4559 217 GRVIASGSPQ 226 (259)
T ss_pred CeEeecCCHH
Confidence 7999999863
No 169
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=334.98 Aligned_cols=210 Identities=28% Similarity=0.381 Sum_probs=172.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999987 9999999988754332 3569999999988889999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.++....+...+. .. .+....++.+++.+||++..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERP------PE------------------------AEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhccccccC------CH------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 99999865322110000 00 001123456788999987666554 46
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999998653 245666688888889999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 170
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-36 Score=328.91 Aligned_cols=221 Identities=24% Similarity=0.358 Sum_probs=193.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
..-++|+|++|+.||+..|||=||||||||+++|.++++|+ +|+|.++|.++..... ++.++.|+|+..+
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 45689999999999999999999999999999999999998 9999999999876553 2569999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
+|..||.||..|+.+.+|++.. +.+.+..+.|+..||+...+..
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y-- 161 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY-- 161 (386)
T ss_pred ccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC--
Confidence 9999999999999999886431 1223455679999999888744
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
++.||||+||||.|||||+.+|+|||||||+|+|||--+.++.+.|.++....++ ||+.++|+.+|.+++.|||.+
T Consensus 162 ---p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~K-TIvFitHDLdEAlriG~rIai 237 (386)
T COG4175 162 ---PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKK-TIVFITHDLDEALRIGDRIAI 237 (386)
T ss_pred ---cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCC-eEEEEecCHHHHHhccceEEE
Confidence 5679999999999999999999999999999999999999999999988776654 555689999999999999999
Q ss_pred ecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 046196 400 LSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEV 438 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 438 (1436)
|++|+|+..|+++|++. .|...-+++|.+.+
T Consensus 238 mkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 238 MKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred ecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 99999999999999864 46666677777654
No 171
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.7e-36 Score=340.39 Aligned_cols=204 Identities=27% Similarity=0.305 Sum_probs=169.7
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc------ccccceEEEeecCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ------ETFARISGYCEQTDIHSP 937 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~q~~~~~~ 937 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 459999999999999999999999999999999999886 569999999987542 123567999999998899
Q ss_pred CCcHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 046196 938 HVTVYESLVYSAWLRL-----PPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSII 1012 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~il 1012 (1436)
.+||+||+.+...... .......+..++++++++.+++.+..+.. +..||||||||++||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999976421100 00011223345678899999998766654 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1013 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1013 llDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 230 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAP 230 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCH
Confidence 999999999999999999999998764 899999999986 46788999999996 688888875
No 172
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.3e-35 Score=335.23 Aligned_cols=215 Identities=26% Similarity=0.370 Sum_probs=173.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2459999999998999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++....+... .... ....+ ..+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~------~~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA------RARRE-----------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc------ccccc-----------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999998754321000 0000 00000 0011224566889999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE--RGITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999864 345666788999999999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 173
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-36 Score=342.73 Aligned_cols=215 Identities=27% Similarity=0.368 Sum_probs=179.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ +++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 477888887652 12359999999999999999999999999999999999887 5699999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.+||++|++. .++..||.||+.|..... ..+.++..+.++++++.++|.+..+.. +..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKP-----PYHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----hhhCCH
Confidence 43 223467999999863 445689999998764322 223334445678999999998777665 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999976 46688999999986 788999
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 875
No 174
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-35 Score=341.28 Aligned_cols=215 Identities=20% Similarity=0.292 Sum_probs=180.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899887652 2458999999999999999999999999999999999986 5689999999876
Q ss_pred Ccc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046196 918 NQE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGL 991 (1436)
Q Consensus 918 ~~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~L 991 (1436)
... ..++.++|++|+..+++.+||.||+.+...... ..+.++..+.++++++.+++.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 421 134568999999988899999999987543211 122333345678889999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 992 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 992 SgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999975 57788999999986 789
Q ss_pred EEEcCC
Q 046196 1071 IYVGPL 1076 (1436)
Q Consensus 1071 ~y~G~~ 1076 (1436)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 175
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.6e-35 Score=333.55 Aligned_cols=205 Identities=21% Similarity=0.372 Sum_probs=172.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 35999999999999999999999999999999999999987 9999999988754332 2459999999988999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------K------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 99999998864321100 0 001123456788999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ .+++++.++|+..++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998764 355677788998899999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988763
No 176
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=345.50 Aligned_cols=218 Identities=22% Similarity=0.309 Sum_probs=179.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
+.++|+++.++.. ......+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 6788888876311 0011359999999999999999999999999999999999987 46899999986531
Q ss_pred ---------------------------cccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 046196 919 ---------------------------QETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVM 970 (1436)
Q Consensus 919 ---------------------------~~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl 970 (1436)
....++.+||++|++ ..+...||+|++.|..... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356799999985 3344579999998865432 234445556789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 046196 971 ELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1049 (1436)
Q Consensus 971 ~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1049 (1436)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 556654 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1050 PSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1050 ~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
++ .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 75 57788999999986 789999985
No 177
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.91 Aligned_cols=218 Identities=22% Similarity=0.325 Sum_probs=175.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-------cccceEEEecCCC-C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-------VPQRTSAYISQND-L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~-~ 238 (1436)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35899999999999999999999999999999999999998 99999999987531 1135699999985 2
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
.+...||+||+.|+.+..+.. . .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------E------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 455679999999875432210 0 00112356788999996 445544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
++.|||||||||+||+||+.+|++|||||||+|||+.+..++.+.|+++... .+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999998653 3566777899999999999999
Q ss_pred EEecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 046196 398 ILLSDGQIVYQGPRENVLE---FFERMGFKCPE 427 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 427 (1436)
++|++|+++++|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 23344555443
No 178
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=345.03 Aligned_cols=218 Identities=25% Similarity=0.316 Sum_probs=179.2
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+.... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888763110 012459999999999999999999999999999999999987 56899999998763
Q ss_pred c-------ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046196 919 Q-------ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVS 989 (1436)
Q Consensus 919 ~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~ 989 (1436)
. ...++.+||++|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..++. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999852 233579999998875432 223444455689999999996 555554 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 179
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=332.96 Aligned_cols=205 Identities=26% Similarity=0.355 Sum_probs=172.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCCcCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDLHIG 241 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~~~~ 241 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999997 9999999998754321 356999999999888
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
.+||+||+.++....+.. . ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------K------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 999999998864322110 0 001123456788999987766554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+. ++++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999987653 35566668888888999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 180
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=343.04 Aligned_cols=218 Identities=23% Similarity=0.380 Sum_probs=177.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-----ccceEEEecCCCC-cC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDL-HI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~-~~ 240 (1436)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999886532 2357999999863 45
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc--ccccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE--VCADTMV 318 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 318 (1436)
..+||+||+.|+....+.. . .+....++++++.+||+ +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------E------------------------EEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhccCC-
Confidence 5689999999864322110 0 01122456789999996 445543
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
++.||||||||++||+||+.+|++|||||||+|||+.++.++.+.|+++++. .+++|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999998653 35677778999999999999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 046196 399 LLSDGQIVYQGPRENVLE---FFERMGFKCPE 427 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 427 (1436)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23344555543
No 181
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=343.42 Aligned_cols=217 Identities=26% Similarity=0.352 Sum_probs=179.2
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|+++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 6788888876310 0011359999999999999999999999999999999999987 56999999998863
Q ss_pred c-------ccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046196 919 Q-------ETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGV 988 (1436)
Q Consensus 919 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~ 988 (1436)
. ..+++.+||++|++ .++ ..||.|++.|..... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 12456799999986 344 469999999875432 223445566788999999996 354543 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|+|++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 689999999999999999999999999999999999999999999999877999999999975 57788999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999985
No 182
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-36 Score=330.34 Aligned_cols=197 Identities=35% Similarity=0.502 Sum_probs=167.5
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|+||++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 35999999999999 999999999999999999999876 569999999987643 2235678999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
.|++.+....+. .+.++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654431 22233345678899999998766654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999876 599999999976 46678999999996 6777654
No 183
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-35 Score=330.41 Aligned_cols=194 Identities=23% Similarity=0.343 Sum_probs=163.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHIG 241 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~~ 241 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 5999999999999999999999999999999999999987 999999998875432 1357999999998899
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
.+||+||+.++.+..+.. . .+....++.+++.+||++..++.+
T Consensus 94 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVP----------P------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 999999999875432110 0 001123456788999987766554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+.+++..+||+|++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR--RGTTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 35566778899889999999999999
Q ss_pred CCeE
Q 046196 402 DGQI 405 (1436)
Q Consensus 402 ~G~i 405 (1436)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9974
No 184
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1e-35 Score=330.71 Aligned_cols=194 Identities=27% Similarity=0.386 Sum_probs=165.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-----ccccceEEEeecCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-----ETFARISGYCEQTDIHSPH 938 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~ 938 (1436)
+.+|+++||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 458999999999999999999999999999999999986 569999999987632 2345679999999999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 939 VTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
+|++||+.+...... ....++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987642111 122333445678899999998766665 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999877899999999986 567889999999864
No 185
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-35 Score=331.16 Aligned_cols=208 Identities=26% Similarity=0.331 Sum_probs=173.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56777776652 12358999999999999999999999999999999999986 57999999998763
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. .+++.++|++|++.+++.+|++||+.+....+ ..+.++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 13567899999998888999999998865433 123333445678899999998766654 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++...+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 46678999999996 554
No 186
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-35 Score=327.84 Aligned_cols=199 Identities=31% Similarity=0.429 Sum_probs=167.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCHH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5899999999999999999999999999999999999987 9999999988754332 35699999999888899999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.++.+..+... .+....++.+++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988643321100 001123456788999987777655 459
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEE
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIV 406 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv 406 (1436)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999986532 456666889888999999999999999999
Q ss_pred Eec
Q 046196 407 YQG 409 (1436)
Q Consensus 407 ~~G 409 (1436)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 187
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.6e-35 Score=332.91 Aligned_cols=217 Identities=24% Similarity=0.295 Sum_probs=171.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677777655210 001258999999999999999999999999999999999876 56999999998764
Q ss_pred c------ccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046196 919 Q------ETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVS 989 (1436)
Q Consensus 919 ~------~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~ 989 (1436)
. ..+++.++|++|++ .+++.+||+||+.+......+. ...+.....++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999997 4667899999998765433211 11111122235788889985 444544 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 56678999999996 6
Q ss_pred EEEEEc
Q 046196 1069 EEIYVG 1074 (1436)
Q Consensus 1069 ~~~y~G 1074 (1436)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 776554
No 188
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-36 Score=349.72 Aligned_cols=208 Identities=26% Similarity=0.376 Sum_probs=170.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.++.++|... ++..
T Consensus 351 ~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~h-lF~~ 426 (573)
T COG4987 351 TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVH-LFSG 426 (573)
T ss_pred cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchH-HHHH
Confidence 36999999999999999999999999999999999999998 9999999999877765 357888999765 5667
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|+|+||..+. |+.+.+++.++....+.++. ..+.++..||.+|+.+.
T Consensus 427 Tlr~NL~lA~-------------------------~~AsDEel~~aL~qvgL~~l--------~~~~p~gl~t~lge~G~ 473 (573)
T COG4987 427 TLRDNLRLAN-------------------------PDASDEELWAALQQVGLEKL--------LESAPDGLNTWLGEGGR 473 (573)
T ss_pred HHHHHHhhcC-------------------------CCCCHHHHHHHHHHcCHHHH--------HHhChhhhhchhccCCC
Confidence 9999999863 34444444444332222211 22355677999997654
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
.||||||||++|||+|++++++++|||||.|||+.|+.++++.+.+.+ ++++++.++|+... .+.||+|++|++|
T Consensus 474 -~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~---~~kTll~vTHrL~~-le~~drIivl~~G 548 (573)
T COG4987 474 -RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA---EGKTLLMVTHRLRG-LERMDRIIVLDNG 548 (573)
T ss_pred -cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh---cCCeEEEEeccccc-HhhcCEEEEEECC
Confidence 699999999999999999999999999999999999999999998754 35556667777654 4789999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+++++|.++++++
T Consensus 549 kiie~G~~~~Ll~ 561 (573)
T COG4987 549 KIIEEGTHAELLA 561 (573)
T ss_pred eeeecCCHHhhhc
Confidence 9999999999875
No 189
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=345.87 Aligned_cols=218 Identities=22% Similarity=0.332 Sum_probs=179.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 58999999877411 0012359999999999999999999999999999999999987 5699999999775
Q ss_pred Cc-------------------ccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 046196 918 NQ-------------------ETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN 976 (1436)
Q Consensus 918 ~~-------------------~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~ 976 (1436)
.. ...++.+|||+|++ .+++ .||+||+.|..... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3454 59999998864321 223444455688999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 046196 977 -PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1055 (1436)
Q Consensus 977 -~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1055 (1436)
+..+.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455543 4679999999999999999999999999999999999999999999998777999999999975 467
Q ss_pred HhhCeEEEEecCcEEEEEcCC
Q 046196 1056 DAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1056 ~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
..+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999996 799999975
No 190
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=335.86 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=179.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67778776552 2459999999999999999999999999999999999876 56899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 919 QE----TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 919 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
.. ..++.++|++|++.+++.+||.||+.+...... ..+.++....++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 134569999999988899999999987643221 122334455678899999998765554 4579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||++|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|+++ ++...+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999975 57788999999986 7888888
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 191
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=342.99 Aligned_cols=215 Identities=22% Similarity=0.333 Sum_probs=173.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCC------------------------
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEE------------------------ 223 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------------------------ 223 (1436)
++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+...
T Consensus 21 ~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 21 KALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred cceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceeccccccccccccccccccccccccccc
Confidence 5899999999999999999999999999999999999998 8999999875421
Q ss_pred ---ccccceEEEecCCC-CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhH
Q 046196 224 ---FVPQRTSAYISQND-LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNV 299 (1436)
Q Consensus 224 ---~~~~~~~~yv~Q~~-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 299 (1436)
...++.+|||+|++ ..++..||+|||.|+....+... .+...
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~ 143 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAKK 143 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHHH
Confidence 01135699999985 45667899999998754322110 01112
Q ss_pred HHHHHHHHhCCc-ccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCe
Q 046196 300 VTDYVLKILGLE-VCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGT 378 (1436)
Q Consensus 300 ~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t 378 (1436)
.++.+++.+||+ +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .++
T Consensus 144 ~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g~ 216 (305)
T PRK13651 144 RAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QGK 216 (305)
T ss_pred HHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCC
Confidence 356678999996 455544 456999999999999999999999999999999999999999999999863 356
Q ss_pred EEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHH---HHHhcCCCCC
Q 046196 379 AVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLE---FFERMGFKCP 426 (1436)
Q Consensus 379 ~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~---~f~~~G~~~p 426 (1436)
+|+.++|+.+++.+.+|+|++|++|+++++|+++++.+ .....|...|
T Consensus 217 tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p 267 (305)
T PRK13651 217 TIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSDNKFLIENNMEPP 267 (305)
T ss_pred EEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCHHHHHHCCCCCC
Confidence 67778999999999999999999999999999988752 2334454444
No 192
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.7e-35 Score=343.41 Aligned_cols=205 Identities=26% Similarity=0.366 Sum_probs=176.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999998875422 2357999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|.++..+... .+....++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765432110 0011234668999999988876654
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+||+++|++|+|||||+|||+.++..+.+.++++.. +++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK---DKTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998742 3667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998765
No 193
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=337.16 Aligned_cols=215 Identities=23% Similarity=0.295 Sum_probs=179.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478888887653 2459999999999999999999999999999999999986 5689999999865
Q ss_pred Cc----------------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 046196 918 NQ----------------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIR-E 980 (1436)
Q Consensus 918 ~~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~-~ 980 (1436)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+..+.+.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1235679999999999999999999987542111 122344456678999999997653 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCe
Q 046196 981 ALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDE 1060 (1436)
Q Consensus 981 ~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1060 (1436)
.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 33 4679999999999999999999999999999999999999999999999877999999999976 56678999
Q ss_pred EEEEecCcEEEEEcCC
Q 046196 1061 LLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1061 v~~l~~Gg~~~y~G~~ 1076 (1436)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999996 788888874
No 194
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=351.10 Aligned_cols=206 Identities=22% Similarity=0.320 Sum_probs=175.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
..+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|+..+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999998 9999999998865432 2469999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++.+||+||+.|+.+..+... .+....++++++.+||++..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998765432110 001123456789999987666544
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEE
Confidence 569999999999999999999999999999999999999999999987643 355666689999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 046196 400 LSDGQIVYQGPRENVL 415 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~ 415 (1436)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999998874
No 195
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=341.98 Aligned_cols=215 Identities=26% Similarity=0.394 Sum_probs=180.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. +++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 588999988762 12359999999999999999999999999999999999987 5799999999886
Q ss_pred Cc-----ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046196 918 NQ-----ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGL 991 (1436)
Q Consensus 918 ~~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~L 991 (1436)
.. ..+++.+||++|++. .+...||+|++.+..... ..+.++..+.++++++.++|.+..++. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 234567999999863 334689999998764322 223344455688999999998777765 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 992 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 992 SgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999976 46678999999996 689
Q ss_pred EEEcCC
Q 046196 1071 IYVGPL 1076 (1436)
Q Consensus 1071 ~y~G~~ 1076 (1436)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999985
No 196
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=339.06 Aligned_cols=208 Identities=24% Similarity=0.331 Sum_probs=174.7
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQND 237 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~ 237 (1436)
...++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3456999999999999999999999999999999999999987 9999999988754321 24699999999
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
.+++.+||+||+.++....+... ......++.+++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88889999999998654321100 00112345678999998777766
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
++ .|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEE
Confidence 54 59999999999999999999999999999999999999999999998653 3456666889988999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988774
No 197
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.3e-36 Score=330.57 Aligned_cols=193 Identities=25% Similarity=0.382 Sum_probs=163.2
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCC-CCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDI-HSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~-~~~~l 939 (1436)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+.. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 459999999999999999999999999999999999876 569999999987642 234567899999874 46678
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 046196 940 TVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1019 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTs 1019 (1436)
|++||+.+..... ........+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 122233345678899999997666654 45799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1020 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1020 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999976 566779999999874
No 198
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=336.40 Aligned_cols=206 Identities=21% Similarity=0.263 Sum_probs=175.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 588999987763 2359999999999999999999999999999999999976 5689999999765
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
. ..++.++|++|++.+++.+||+||+.+... . ...+.++++++.+++.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 235679999999988898999999987421 0 1124568899999998766654 4579999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+...+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999976 46778999999996 688887764
No 199
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=338.41 Aligned_cols=215 Identities=21% Similarity=0.338 Sum_probs=175.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCC-CcCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQND-LHIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~-~~~~~l 243 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4899999999999999999999999999999999999998 9999999998754322 35699999996 367788
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+|||.|+.+..+.. . .+....++.+++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIP----------H------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 9999999875432210 0 001123566889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999998653 356666678888877 589999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 046196 404 QIVYQGPRENVLE---FFERMGFKCP 426 (1436)
Q Consensus 404 ~iv~~G~~~~~~~---~f~~~G~~~p 426 (1436)
+++..|+++++.+ .++..|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 217 QVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred EEEEECCHHHHHcChHHHHHcCCCCc
Confidence 9999999988753 2344455544
No 200
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.3e-36 Score=330.99 Aligned_cols=199 Identities=27% Similarity=0.420 Sum_probs=163.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCC--CCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHS--PHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~lTv 941 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 458999999999999999999999999999999999876 56999999998653 2456799999987653 34899
Q ss_pred HHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 046196 942 YESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1020 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsg 1020 (1436)
+||+.+........ ....+...+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321100 011123345678899999998766654 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1021 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1021 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998877899999999976 57788999999975 4 55544
No 201
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.8e-35 Score=334.60 Aligned_cols=214 Identities=26% Similarity=0.335 Sum_probs=176.2
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCc---eeEEEEECCc
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---VSGSITISGY 915 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g~ 915 (1436)
++++|+++.+. +..+|+|+|++|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56777776552 2358999999999999999999999999999999999976321 2899999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 046196 916 PKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN----PIREALVGLP 986 (1436)
Q Consensus 916 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~~g~~ 986 (1436)
++.. ...++.++|++|+..+++ .|++||+.+....+. ..+.++..+.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 223567999999988888 999999988654331 112334445678899999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 468999999999999999999999999999999999999999999999876 489999999976 57788999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 688888874
No 202
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=341.69 Aligned_cols=218 Identities=22% Similarity=0.341 Sum_probs=179.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKG--------TPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCC--------CccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36788888776310 0012359999999999999999999999999999999999987 5689999999876
Q ss_pred Cc-------ccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 046196 918 NQ-------ETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPG 987 (1436)
Q Consensus 918 ~~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~ 987 (1436)
.. ...++.+||++|++ .+++ .||.||+.|..... ..+.++..+.++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13456799999985 3444 59999998865332 233444556788999999996 555554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 468999999999999999999999999999999999999999999999975 4899999999976 46788999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 789999875
No 203
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-35 Score=350.47 Aligned_cols=209 Identities=26% Similarity=0.418 Sum_probs=176.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 45999999999999999999999999999999999999997 9999999998765432 35799999999888999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.++..... .+.. .. .......++.+++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~--~~~~---~~-------------------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR--SRFD---TW-------------------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc--cccc---CC-------------------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998642110 0000 00 0011234577899999988777655
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.|||||||||.|||||+++|++|||||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999875 3 456777889999999999999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 204
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=342.77 Aligned_cols=217 Identities=20% Similarity=0.377 Sum_probs=174.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-------------------ccc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-------------------VPQ 227 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 227 (1436)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35899999999999999999999999999999999999998 99999999877532 113
Q ss_pred ceEEEecCCC-CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHH
Q 046196 228 RTSAYISQND-LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLK 306 (1436)
Q Consensus 228 ~~~~yv~Q~~-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (1436)
+.++||+|++ ..+...||+||+.|+....+.. . .+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK----------K------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 5699999986 2344569999999874322110 0 001123456788
Q ss_pred HhCCc-ccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 046196 307 ILGLE-VCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQ 385 (1436)
Q Consensus 307 ~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q 385 (1436)
.+||+ +..+ +.+..|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.. .+++|++++|
T Consensus 162 ~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITH 234 (320)
T ss_pred HcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEec
Confidence 99996 3444 33457999999999999999999999999999999999999999999998754 3566777889
Q ss_pred CchhHHHhcccEEEecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 046196 386 PAPETYELFDDLILLSDGQIVYQGPRENVLE---FFERMGFKCPE 427 (1436)
Q Consensus 386 ~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 427 (1436)
+..++.++||+|++|++|++++.|+++++.+ .++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9888999999999999999999999998752 34455666554
No 205
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=326.19 Aligned_cols=198 Identities=26% Similarity=0.368 Sum_probs=166.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 35999999999999999999999999999999999999987 9999999987754 2345799999999888899999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.+..+..+... .+....++.+++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988644322100 001123456788999987766554 469
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEE
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIV 406 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv 406 (1436)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR--AGKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998764 2456677889998999999999999999998
Q ss_pred Eec
Q 046196 407 YQG 409 (1436)
Q Consensus 407 ~~G 409 (1436)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 206
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.6e-35 Score=331.43 Aligned_cols=212 Identities=26% Similarity=0.401 Sum_probs=175.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45677766542 2459999999999999999999999999999999999976 56999999998764
Q ss_pred cc--cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 919 QE--TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 919 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
.. ...+.++|++|+..+++.+|++|++.+....+ ....++..+.++++++.+++.+..++. +..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDK-----VRELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHH
Confidence 21 22346899999988888999999998765432 122333445678899999998766654 357999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|++ |+++..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 5899999999986 34 45999999986 68888876
Q ss_pred C
Q 046196 1076 L 1076 (1436)
Q Consensus 1076 ~ 1076 (1436)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 207
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.4e-35 Score=328.73 Aligned_cols=203 Identities=25% Similarity=0.415 Sum_probs=168.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 35999999999999999999999999999999999999987 9999999988754432 3469999999988999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKIL-GLEVCADTMVGDE 321 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 321 (1436)
+||+||+.++....+ . .+ ....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~-----~~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R-----AK-----------------------------RKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c-----hh-----------------------------HHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988643211 0 00 001223455666 4665555444
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999999864 35666668899889999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987763
No 208
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-36 Score=363.43 Aligned_cols=217 Identities=28% Similarity=0.433 Sum_probs=181.5
Q ss_pred CCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECC
Q 046196 835 EPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISG 914 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 914 (1436)
-...++|+||+|.|+..+ ..++|+|+||+|+|||.+||+||||+||||+.++|-..+. |.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 345799999999997543 4579999999999999999999999999999999998887 6799999999
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHH-----HHHHHHHcCCcccccccccCC
Q 046196 915 YPKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMF-----VEEVMELVELNPIREALVGLP 986 (1436)
Q Consensus 915 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~-----v~~vl~~l~l~~~~~~~~g~~ 986 (1436)
.|+.+ ..+++.+|+|.|++.+|. -||+||+.|+.. +.+.++.... +.+-+ .++.+-.|+.+|..
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEK 601 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCc
Confidence 99754 457789999999999986 599999998753 2233322111 11122 35666688999866
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
| ..||||||||++|||||++||+||+|||+||.||+++...|++.|.++.+ ++|||+++|+.+ ..+.+|+|+++++
T Consensus 602 G-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 G-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred c-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 4 47999999999999999999999999999999999999999999998765 699999999965 7888999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|..
T Consensus 678 -G~V~E~G~h 686 (716)
T KOG0058|consen 678 -GRVVEMGTH 686 (716)
T ss_pred -CeEEecccH
Confidence 799998853
No 209
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=340.83 Aligned_cols=216 Identities=25% Similarity=0.320 Sum_probs=180.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++. .+.+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKE----------DQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCC----------CCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788888877631 012358999999999999999999999999999999999987 5699999999886
Q ss_pred Cc---ccccceEEEeecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTD-IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.+||++|++ ..++..||+||+.|..... ..+.++..+.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKERE-----PARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 23456799999986 3677889999998865332 233444556789999999998777665 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999976 34 57999999986 78988
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 210
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-35 Score=315.68 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=170.7
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCCCCCC
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTDIHSP 937 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~ 937 (1436)
++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++... ..++-++||||....||
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 45679999999999999999999999999999999999987 4589999999997542 23456999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELV-ELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1016 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDE 1016 (1436)
.+||+|||..++..+.. ........+++.+.+ .|.+.++...| .|||||||.++|||||+.+|++|+|||
T Consensus 92 ~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDE 162 (237)
T COG0410 92 RLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDE 162 (237)
T ss_pred hCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999987654422 111111256777766 35556666654 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1017 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1017 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||.||-|.-.+.|.+.|+++.++ |.||+++-+... ...+.+||.++|.+ |++++.||.
T Consensus 163 Ps~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~ 221 (237)
T COG0410 163 PSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTA 221 (237)
T ss_pred CccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCH
Confidence 99999999999999999999866 779999988765 47789999999996 799999985
No 211
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=339.33 Aligned_cols=203 Identities=25% Similarity=0.295 Sum_probs=170.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCC-cCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL-HIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~l 243 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4899999999999999999999999999999999999997 9999999998764322 356999999863 46678
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.|+.+..+.. . .+....++++++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------K------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 9999999864322110 0 001123466789999987776555
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+..++.++||+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 3 566777899999999999999999999
Q ss_pred eEEEecChhHH
Q 046196 404 QIVYQGPRENV 414 (1436)
Q Consensus 404 ~iv~~G~~~~~ 414 (1436)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998754
No 212
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=376.60 Aligned_cols=209 Identities=24% Similarity=0.374 Sum_probs=169.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 35899999999999999999999999999999999999998 9999999999877654 467999999988664 6
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|++|||.++... +.+.+++.+++...+.+. . .-.|+++.||.+|+++
T Consensus 432 Ti~~Ni~~~~~~------------------------~~~~~~i~~al~~~~l~~------~--i~~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTE------------------------QYSREQIEEAARMAYAMD------F--INKMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCC------------------------CCCHHHHHHHHHHhCcHH------H--HHhcccccCceeCCCC-
Confidence 999999986310 012223333332222211 1 1237888999999875
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
++||||||||++|||||+++|++|+||||||+||+.++..+.+.|++... ++| +|.++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~t-vI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRT-SLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCE-EEEEecch-HHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998632 344 44466654 677889999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 213
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=340.97 Aligned_cols=219 Identities=25% Similarity=0.323 Sum_probs=178.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+... ....+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36778887765310 0012459999999999999999999999999999999999987 5799999999876
Q ss_pred Cc-------ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046196 918 NQ-------ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGV 988 (1436)
Q Consensus 918 ~~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~ 988 (1436)
.. ...++.+||++|++. .+..+||.|++.|..... ....++..++++++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----P 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----c
Confidence 32 123457999999862 333589999998765432 223344556688999999996 566654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999976 57789999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89998874
No 214
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.4e-35 Score=331.04 Aligned_cols=204 Identities=24% Similarity=0.339 Sum_probs=168.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc-----CCCCCcceEEEECCccCCCcc-----ccceEEEecCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKL-----GKDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQN 236 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 236 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 35999999999999999999999999999999999999 776 999999998875432 23569999999
Q ss_pred CCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 237 DLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 237 ~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
+.++ .+||+||+.++.+..+... . .+....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL---------K------------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8877 8999999988754321100 0 0011234567889999876554
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
.+. +..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 420 357999999999999999999999999999999999999999999999854 3 6677788999899999999
Q ss_pred EEEecCCeEEEecChhH
Q 046196 397 LILLSDGQIVYQGPREN 413 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~ 413 (1436)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998765
No 215
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.5e-35 Score=385.97 Aligned_cols=205 Identities=26% Similarity=0.361 Sum_probs=168.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|
T Consensus 493 ~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~gT 568 (710)
T TIGR03796 493 PLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EGT 568 (710)
T ss_pred CcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hcc
Confidence 5899999999999999999999999999999999999998 9999999999877654 47899999999866 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++. |+.+.+++.+++...+.+.. +-.|+++.||.+|+.+ .
T Consensus 569 i~eNi~l~~-------------------------~~~~~~~i~~al~~~~l~~~--------i~~lp~gl~t~i~e~G-~ 614 (710)
T TIGR03796 569 VRDNLTLWD-------------------------PTIPDADLVRACKDAAIHDV--------ITSRPGGYDAELAEGG-A 614 (710)
T ss_pred HHHHhhCCC-------------------------CCCCHHHHHHHHHHhCCHHH--------HHhCcCcccceeccCC-C
Confidence 999998752 11222333333333222211 2247788899999875 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++++|+||+||||||+||+.++.+|.+.|++ .++|+|+ ++|.. ++...+|+|++|++|+
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLERGK 688 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeCCE
Confidence 7999999999999999999999999999999999999999999985 2445444 66655 5667799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++++
T Consensus 689 i~~~G~~~~Ll~ 700 (710)
T TIGR03796 689 VVQRGTHEELWA 700 (710)
T ss_pred EEEecCHHHHHH
Confidence 999999999875
No 216
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.3e-35 Score=382.91 Aligned_cols=207 Identities=28% Similarity=0.457 Sum_probs=171.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|. .|
T Consensus 479 ~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~T 554 (694)
T TIGR03375 479 PALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-GT 554 (694)
T ss_pred cceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-hh
Confidence 4899999999999999999999999999999999999998 9999999999887654 468999999998665 69
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++. |+.+.+++.+++...+.+.. +-.|++..||.+|+.+.
T Consensus 555 I~eNi~~~~-------------------------~~~~~~~i~~a~~~~~l~~~--------i~~lp~gl~T~i~e~G~- 600 (694)
T TIGR03375 555 LRDNIALGA-------------------------PYADDEEILRAAELAGVTEF--------VRRHPDGLDMQIGERGR- 600 (694)
T ss_pred HHHHHhCCC-------------------------CCCCHHHHHHHHHHcChHHH--------HHhCcccccceecCCCC-
Confidence 999998862 12223334444333332211 22478889999998754
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++++|++++||||||+||+.++..|.+.|++..+ ++|+|+ ++|.. ++...||+|++|++|+
T Consensus 601 ~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~ii-ItHrl-~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 601 SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVL-VTHRT-SLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCH-HHHHhCCEEEEEeCCE
Confidence 6999999999999999999999999999999999999999999998642 444444 66654 5678999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++++
T Consensus 677 i~e~G~~~eLl~ 688 (694)
T TIGR03375 677 IVADGPKDQVLE 688 (694)
T ss_pred EEeeCCHHHHHH
Confidence 999999999875
No 217
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=333.22 Aligned_cols=212 Identities=22% Similarity=0.331 Sum_probs=176.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 478888887652 2459999999999999999999999999999999999976 5689999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 046196 918 NQE----TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELV-ELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 918 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~~g~~~~~~LS 992 (1436)
... ..++.++|++|+..+++.+||.||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 13456999999998899999999998754221 1122233466777777 465544443 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999976 57889999999996 78999
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9875
No 218
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.5e-35 Score=328.32 Aligned_cols=210 Identities=26% Similarity=0.344 Sum_probs=170.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4567777665210 112459999999999999999999999999999999999976 56999999998764
Q ss_pred cc---c---cc-ceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046196 919 QE---T---FA-RISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGL 991 (1436)
Q Consensus 919 ~~---~---~~-~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~L 991 (1436)
.. . ++ +.++|++|+..+++.+||+|++.+....+. ....+..+.+.++++.+++.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 21 1 12 568999999988889999999988654321 12233345678899999998766654 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 992 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 992 SgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998764 899999999976 34 55799999996 554
No 219
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=338.86 Aligned_cols=213 Identities=22% Similarity=0.323 Sum_probs=177.7
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. +++.+|+||||+|++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 45677776542 12359999999999999999999999999999999999876 57999999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 919 Q----ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 919 ~----~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
. ...++.+||++|++. .+...|+.||+.+..... ..+.++..+.++++++.+++.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCH
Confidence 2 233567999999865 466789999998765332 223344455688999999998776665 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 34 66999999986 789999
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 975
No 220
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.6e-35 Score=343.84 Aligned_cols=229 Identities=21% Similarity=0.257 Sum_probs=183.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 57889988776421100000001123469999999999999999999999999999999999987 5689999999886
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046196 918 NQE------TFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGV 988 (1436)
Q Consensus 918 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~ 988 (1436)
... .+++.++|++|++ .++|.+||.|++.+......+ ..+.++.++.++++++.++|. ...+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 578899999999886543211 234455566788999999994 344443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
.+||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 689999999999999999999999999999999999999999999999765 899999999976 46678999999986
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999975
No 221
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.1e-35 Score=329.96 Aligned_cols=203 Identities=29% Similarity=0.415 Sum_probs=170.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 45999999999999999999999999999999999999987 999999998875321 2356999999998888999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+..+..+... . +....++.+++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------S------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999988654322100 0 00123456788999987777655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ + .+++.++|+..++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998753 3 567778898888989999999999999
Q ss_pred EEEecChhHH
Q 046196 405 IVYQGPRENV 414 (1436)
Q Consensus 405 iv~~G~~~~~ 414 (1436)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 222
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=328.51 Aligned_cols=201 Identities=28% Similarity=0.386 Sum_probs=168.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999988753 245799999999888889999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988654321100 001123456788999987666554 469
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec--CCe
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS--DGQ 404 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~--~G~ 404 (1436)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987543 34566668888888999999999999 799
Q ss_pred EEEecChh
Q 046196 405 IVYQGPRE 412 (1436)
Q Consensus 405 iv~~G~~~ 412 (1436)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 223
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=333.30 Aligned_cols=214 Identities=27% Similarity=0.385 Sum_probs=172.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 45999999999999999999999999999999999999887 999999998876543 135699999999888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++..... ... ... .+..+ ......++.+++.+||++..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~---~~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STW---RSL------FGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhh---hhh------cccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987632110 000 000 00000 001123456788999987665544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|++++.. .+++|+.++|+..++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998643 2456677889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 224
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=332.80 Aligned_cols=213 Identities=26% Similarity=0.354 Sum_probs=178.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67788877652 2359999999999999999999999999999999999976 56899999998752
Q ss_pred ---------cccccceEEEeecCCCCCCCCcHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046196 919 ---------QETFARISGYCEQTDIHSPHVTVYESLVYS-AWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGV 988 (1436)
Q Consensus 919 ---------~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~-~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 988 (1436)
....++.++|++|++.+++.+||.||+.+. .... .....+..+.+++.++.+|+.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 012345789999999999999999999753 2221 122233345678899999998766665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777999999999986 56678999999996 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 88898874
No 225
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=350.93 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=173.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---c----ccceEEEeecCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---T----FARISGYCEQTDIHS 936 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~~~ 936 (1436)
..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.+||++|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 458999999999999999999999999999999999987 5699999999886431 1 134699999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 046196 937 PHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1016 (1436)
Q Consensus 937 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDE 1016 (1436)
+++||+||+.+....+. .+.++..+.++++++.++|.+..++. ++.||||||||++|||||+.+|++|+|||
T Consensus 119 ~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999998765431 23344456688999999998877765 45799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1017 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1017 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+|||+.++..+++.|+++.+ .|+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999976 57788999999996 688888864
No 226
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.8e-35 Score=334.55 Aligned_cols=214 Identities=23% Similarity=0.321 Sum_probs=178.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35677776652 2358999999999999999999999999999999999876 56999999998763
Q ss_pred c----------------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 046196 919 Q----------------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREAL 982 (1436)
Q Consensus 919 ~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~ 982 (1436)
. ...++.++|++|++.+++..|+.||+.+..... .....++..+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123334445678899999998766654
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeE
Q 046196 983 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDEL 1061 (1436)
Q Consensus 983 ~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1061 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999986 567789999
Q ss_pred EEEecCcEEEEEcCC
Q 046196 1062 LLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1062 ~~l~~Gg~~~y~G~~ 1076 (1436)
++|++ |+++..|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 788888874
No 227
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.7e-35 Score=334.75 Aligned_cols=207 Identities=21% Similarity=0.344 Sum_probs=172.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~~~~ 240 (1436)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999987 9999999988754321 34699999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++...... .... .....++.+++.+||++..++.+
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-- 141 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAP------------------------LLHSTVMMKLEAVGLRGAAKLMP-- 141 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHcCChhhhhCCh--
Confidence 899999999886321100 0000 01123456788999988777655
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++... .+++|+.++|+..++.+++|+|++|
T Consensus 142 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 142 ---SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 469999999999999999999999999999999999999999999998643 3556666889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 228
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-35 Score=381.78 Aligned_cols=206 Identities=26% Similarity=0.418 Sum_probs=166.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.++ +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 35899999999999999999999999999999999999998 9999999999877654 46799999999865 57
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|+||||.++.. +.+.+++.+++...+.+. . +-.|+++.||.+|+++
T Consensus 570 TIreNI~~g~~-------------------------~~~~e~i~~al~~a~l~~------~--i~~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLT-------------------------DTPDEEIMAAAKAANAHD------F--IMEFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCC-------------------------CCCHHHHHHHHHHcCCHH------H--HHhCCCccCCcccCCC-
Confidence 99999998632 111222333332222211 1 1236778899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
.+||||||||++||||++++|+||+||||||+||+.++..+.+ ... . ++++++.++|.. ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~-~~~TvIiItHrl-~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---R-ASRTVLLIAHRL-STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---c-CCCeEEEEeccH-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999998888 221 2 344555566765 567789999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+|+++|+++++++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999875
No 229
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5e-35 Score=327.44 Aligned_cols=197 Identities=24% Similarity=0.355 Sum_probs=170.4
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYE 943 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 943 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 458999999999999999999999999999999999876 57999999998764322 256899999998889999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 046196 944 SLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1023 (1436)
Q Consensus 944 ~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~ 1023 (1436)
|+.+....+. .+ ...+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 12467889999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1024 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1024 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999877899999999986 57788999999986 7898988763
No 230
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=338.24 Aligned_cols=236 Identities=29% Similarity=0.428 Sum_probs=198.2
Q ss_pred HhcCCCCCceeEEeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCC
Q 046196 110 ERVGLDIPTIEVRFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPP 189 (1436)
Q Consensus 110 ~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 189 (1436)
++..++.|+..+..|++++-- ...++++|+|+||.+.+|+-++|+|||
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~P--------------------------------Pg~~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAAP--------------------------------PGQKKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred CCCCCCCCCceeeEeeeeecC--------------------------------CCCCCcceecceeEecCCceEEEECCC
Confidence 346667788889999987621 113357999999999999999999999
Q ss_pred CCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhh
Q 046196 190 SSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQ 266 (1436)
Q Consensus 190 GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 266 (1436)
|||||||.++|.|..+|. +|.|.+||.+++.+++. +.+||.||+-.+| ..||.|||. |+
T Consensus 372 gSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF-~GTIaeNIa---Rf----------- 433 (580)
T COG4618 372 GSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELF-DGTIAENIA---RF----------- 433 (580)
T ss_pred CccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceec-CCcHHHHHH---hc-----------
Confidence 999999999999999997 99999999999888764 7899999987755 569999995 22
Q ss_pred hhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCce
Q 046196 267 ELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARA 346 (1436)
Q Consensus 267 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~i 346 (1436)
.++.|.+.+.+|+.+++.++- ++.|++++||.||+.+. +||||||||+++|||++++|.+
T Consensus 434 -----------~~~~d~~kIieAA~lAgvHel--------Il~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 434 -----------GEEADPEKVIEAARLAGVHEL--------ILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred -----------cccCCHHHHHHHHHHcChHHH--------HHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCcE
Confidence 234566777788777765543 56899999999998765 6999999999999999999999
Q ss_pred eEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecChhHHHHHH
Q 046196 347 LFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGPRENVLEFF 418 (1436)
Q Consensus 347 llLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f 418 (1436)
++||||-|.||+.....+.+.+.+... .++++|+ ++ |++.+...+|+|++|++|++..+|+++|++...
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-ia-HRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-IA-HRPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-Ee-cCHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999998643 4555554 43 456899999999999999999999999998754
No 231
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.6e-35 Score=346.85 Aligned_cols=208 Identities=23% Similarity=0.299 Sum_probs=175.9
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCc----cCCCccc-------cceEEEe
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGH----GMEEFVP-------QRTSAYI 233 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 233 (1436)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333221 1469999
Q ss_pred cCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccc
Q 046196 234 SQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVC 313 (1436)
Q Consensus 234 ~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 313 (1436)
+|+..+++.+||+||+.|+.+..+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865432110 0111235667899999887
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHh
Q 046196 314 ADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYEL 393 (1436)
Q Consensus 314 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 393 (1436)
.|..+ ..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+.. +++|+.++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 77655 4599999999999999999999999999999999999999999999986533 56666689999999999
Q ss_pred cccEEEecCCeEEEecChhHHH
Q 046196 394 FDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 394 ~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 232
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-35 Score=332.16 Aligned_cols=217 Identities=25% Similarity=0.309 Sum_probs=177.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 367888877652 235899999999999999999999999999999999987632 4689999999
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCC
Q 046196 915 YPKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI----REALVGLPG 987 (1436)
Q Consensus 915 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~----~~~~~g~~~ 987 (1436)
.++.. ...++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.+++.+. .+..
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87642 23456799999998888999999999886533211 11223344567889999998542 2332
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ .+.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999999864 899999999986 56788999999986
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 788888874
No 233
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=333.20 Aligned_cols=215 Identities=22% Similarity=0.248 Sum_probs=175.5
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999987652 235899999999999999999999999999999999987642 3589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN----PIREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~~g~ 985 (1436)
.++.. ...++.++|++|+..+++ +||+||+.+...... ........+.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 899999988654321 112233345678888888874 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ .+.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999986 4799999999986 5678899999998
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 234
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-35 Score=300.69 Aligned_cols=200 Identities=27% Similarity=0.398 Sum_probs=177.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYE 943 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 943 (1436)
..+|+|||++|.+||.++++||||||||||||+++|..+ |..|+|.+||+++.... ...|.|+|++.++|-+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 349999999999999999999999999999999999987 67999999999886433 23489999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 046196 944 SLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1023 (1436)
Q Consensus 944 ~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~ 1023 (1436)
|+.|+.+++ .+++.+|.+.+.+.+..+||.+..++. +-+||||||||+.|||||+.+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 466788999999999999999888766 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhhCeEEEEecC-cEEEEEcCC
Q 046196 1024 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFDAFDELLLMKRG-GEEIYVGPL 1076 (1436)
Q Consensus 1024 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G-g~~~y~G~~ 1076 (1436)
-+++.++++|-++. .+|+.++++||+.+ +..-+++++++|+.| |+++..=|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 99999999998876 45999999999986 455578999999964 677766665
No 235
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.1e-35 Score=329.09 Aligned_cols=205 Identities=20% Similarity=0.332 Sum_probs=171.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-----ccceEEEecCCCCcCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDLHIG 241 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~~~~ 241 (1436)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 35999999999999999999999999999999999999987 999999998875421 1356999999998888
Q ss_pred CCCHHHHHHhhhhh-cCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 242 EMTVRETLAFSARC-QGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
.+||+||+.++... .+. .. .+....++++++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGA----------SK------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999886321 110 00 001123456788999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. .+++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE--EGMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3566677889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 236
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=334.84 Aligned_cols=217 Identities=21% Similarity=0.252 Sum_probs=178.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 477888887652 2459999999999999999999999999999999999976 5799999999876
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC----------CCC--CHHHHHHHHHHHHHHcCCcccccc
Q 046196 918 NQE---T-FARISGYCEQTDIHSPHVTVYESLVYSAWLRLP----------PEV--DSDTRKMFVEEVMELVELNPIREA 981 (1436)
Q Consensus 918 ~~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~----------~~~--~~~~~~~~v~~vl~~l~l~~~~~~ 981 (1436)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.+++.++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233489999999999999999999986431110 000 112233457888999999876665
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCe
Q 046196 982 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDE 1060 (1436)
Q Consensus 982 ~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~ 1060 (1436)
. ++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 4579999999999999999999999999999999999999999999998775 899999999976 57788999
Q ss_pred EEEEecCcEEEEEcCC
Q 046196 1061 LLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1061 v~~l~~Gg~~~y~G~~ 1076 (1436)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999986 788888875
No 237
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-35 Score=332.00 Aligned_cols=206 Identities=25% Similarity=0.385 Sum_probs=171.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 35999999999999999999999999999999999999987 9999999988754322 35689999999989899
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc--cccccccCc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV--CADTMVGDE 321 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 321 (1436)
||+||+.++.+..+.. . ......+..+++.+||++ ..++
T Consensus 91 tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~l~~~~~~~~----- 131 (242)
T cd03295 91 TVEENIALVPKLLKWP----------K------------------------EKIRERADELLALVGLDPAEFADR----- 131 (242)
T ss_pred cHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----
Confidence 9999998864332110 0 001123456788999975 4444
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.++.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 34569999999999999999999999999999999999999999999998653 35667778888888999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|++++.|+++++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988764
No 238
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=334.44 Aligned_cols=213 Identities=25% Similarity=0.359 Sum_probs=177.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56778776652 2459999999999999999999999999999999999876 57899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGq 995 (1436)
. ...++.++|++|+..+++.+||+|++.+..... ....+...+.++++++.+++.+..++. +..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRD-----YPQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHH
Confidence 2 223456899999988888899999998754221 111222344578899999998766665 45799999
Q ss_pred HHHHHHHHHHh------hCCCcceeeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 996 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 996 rqRl~iA~aL~------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. .+...+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 66899999999976 56778999999996 6
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 239
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=337.17 Aligned_cols=214 Identities=25% Similarity=0.367 Sum_probs=178.9
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. +++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67788877652 12348999999999999999999999999999999999877 57999999998764
Q ss_pred c---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 919 Q---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
. ...++.+||++|++. .+...||.||+.+..... ..+.+...+.++++++.+++.+..++. ++.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRV-----PHHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCCHH
Confidence 3 234567899999863 344689999998765322 233444455678999999998776665 4579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 57789999999996 689999
Q ss_pred cCC
Q 046196 1074 GPL 1076 (1436)
Q Consensus 1074 G~~ 1076 (1436)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 975
No 240
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-35 Score=332.81 Aligned_cols=220 Identities=27% Similarity=0.298 Sum_probs=177.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 477888887652 235899999999999999999999999999999999997642 3589999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 046196 915 YPKN-----QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGV 988 (1436)
Q Consensus 915 ~~~~-----~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~ 988 (1436)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....++..+.++++++.+++.+. .+.. . ..+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~ 147 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRL-N-DYP 147 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhh-c-cCh
Confidence 8764 123456799999999999999999999876543211 11223334457888999888532 1111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|++ |
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 224 (253)
T PRK14267 148 SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-G 224 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999865 699999999976 57788999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
+++..|+.
T Consensus 225 ~i~~~~~~ 232 (253)
T PRK14267 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 89998875
No 241
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3e-35 Score=333.79 Aligned_cols=213 Identities=23% Similarity=0.328 Sum_probs=171.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999987 999999998875432 135699999999889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++..... .... ... +.. .......++.+++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~~------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SLL------GRF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hhh------ccc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532110 0000 000 000 0001123456788999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+. .+++|+.++|+..++.++||++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 469999999999999999999999999999999999999999999987653 3556666889998999999999999
Q ss_pred cCCeEEEecChhHH
Q 046196 401 SDGQIVYQGPRENV 414 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~ 414 (1436)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998875
No 242
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4e-35 Score=371.76 Aligned_cols=206 Identities=26% Similarity=0.424 Sum_probs=166.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLF-SAT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhh-ccc
Confidence 5899999999999999999999999999999999999998 9999999999887654 35799999998866 469
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++||+.++.. +.+.+++.++++..+.+. . .-. +++.||.||+++.
T Consensus 430 i~~Ni~~~~~-------------------------~~~~~~i~~al~~~~l~~------~--i~~-p~GldT~vge~g~- 474 (574)
T PRK11160 430 LRDNLLLAAP-------------------------NASDEALIEVLQQVGLEK------L--LED-DKGLNAWLGEGGR- 474 (574)
T ss_pred HHHHhhcCCC-------------------------ccCHHHHHHHHHHcCCHH------H--HcC-ccccCchhcCCCC-
Confidence 9999998632 111222222222222111 1 123 6788999998654
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.||||||||++||||++++|++|+||||||+||+.++..|.+.|++..+ ++|+|+ ++|... ....+|+|++|++|+
T Consensus 475 ~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tvii-itHr~~-~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 475 QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLM-ITHRLT-GLEQFDRICVMDNGQ 550 (574)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEE-EecChh-HHHhCCEEEEEeCCe
Confidence 6999999999999999999999999999999999999999999998642 445544 566554 456799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++|+++
T Consensus 551 i~~~g~~~~l~~ 562 (574)
T PRK11160 551 IIEQGTHQELLA 562 (574)
T ss_pred EEEeCCHHHHHh
Confidence 999999999865
No 243
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-35 Score=333.43 Aligned_cols=214 Identities=25% Similarity=0.309 Sum_probs=175.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899887652 235899999999999999999999999999999999987531 3689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ..+++.++|++|+..+++ +|++||+.+..... ..+.++..+.++++++.+++.. ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988877 89999998865432 1223333455788999998842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999976 5678899999998
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 6 789998874
No 244
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.5e-35 Score=323.56 Aligned_cols=195 Identities=26% Similarity=0.400 Sum_probs=165.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-cccceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-VPQRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~~~~~~~lTV 245 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 35999999999999999999999999999999999999987 99999999877542 123569999999988989999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.+.....+. ....++.+++.+||++..++.+ +.
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KG 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hh
Confidence 9999886432110 0112355788899987766554 45
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ .+.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 345666688998899999999999999999
Q ss_pred EEec
Q 046196 406 VYQG 409 (1436)
Q Consensus 406 v~~G 409 (1436)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 245
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-34 Score=327.10 Aligned_cols=206 Identities=26% Similarity=0.375 Sum_probs=170.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc--cceEEEecCCCCcCCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP--QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~~~~~~~lT 244 (1436)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 35999999999999999999999999999999999999988 9999999987754322 246999999988888999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+.....+.. . .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------R------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 999998764322100 0 0001234567888999877766554
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++++. .+.++++++|+..++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHh-hCCEEEEEeCCe
Confidence 59999999999999999999999999999999999999999999998643 3456666788888775 599999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887754
No 246
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=326.55 Aligned_cols=201 Identities=25% Similarity=0.327 Sum_probs=166.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999987 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++.+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------P------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 88999999999864322110 0 001123456789999987666544
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+.|||||||||+||+|++.+|++|||||||+|||+.++..+.+.|+++... ++++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999987542 35566668888877665 589999
Q ss_pred ecCCeEEEecCh
Q 046196 400 LSDGQIVYQGPR 411 (1436)
Q Consensus 400 L~~G~iv~~G~~ 411 (1436)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 247
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.8e-35 Score=325.87 Aligned_cols=198 Identities=31% Similarity=0.421 Sum_probs=166.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCCH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lTV 245 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999987 999999998875321 23579999999988888999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.+..+..+.. . .+....++.+++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------G------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 99998754322110 0 001123466789999987766554 46
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+.+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 355677788998899999999999999999
Q ss_pred EEec
Q 046196 406 VYQG 409 (1436)
Q Consensus 406 v~~G 409 (1436)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8765
No 248
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.1e-35 Score=382.65 Aligned_cols=207 Identities=28% Similarity=0.412 Sum_probs=170.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|++.+| +.|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIF-SGS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceeh-hHH
Confidence 4899999999999999999999999999999999999998 9999999999877654 46799999999866 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+|||.++.+ |+.+.+++.+++...+.++. +..|+.+.||.||+.+ .
T Consensus 564 I~eNi~l~~~------------------------~~~~~~~i~~a~~~a~l~~~--------i~~lp~gldt~i~e~G-~ 610 (708)
T TIGR01193 564 ILENLLLGAK------------------------ENVSQDEIWAACEIAEIKDD--------IENMPLGYQTELSEEG-S 610 (708)
T ss_pred HHHHHhccCC------------------------CCCCHHHHHHHHHHhCCHHH--------HHhcccccCcEecCCC-C
Confidence 9999998631 11222333344333332211 2247888999999865 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++++|++|+||||||+||+.++..+.+.|+++ .++| +|.++|.. ++.+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T-~IiitHr~-~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKT-IIFVAHRL-SVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCE-EEEEecch-HHHHcCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999874 2444 45466655 5678899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999999865
No 249
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-35 Score=337.04 Aligned_cols=207 Identities=20% Similarity=0.285 Sum_probs=170.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-------ccceEEEecCCC-C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-------PQRTSAYISQND-L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~-~ 238 (1436)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 235799999985 2
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
.+...||+||+.|+....+.. . .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 344469999999874322110 0 00112346678899996 455544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
++.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.++++... .+++|++++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999998643 4567777899999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 046196 398 ILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~ 416 (1436)
++|++|++++.|+++++.+
T Consensus 217 ~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999988653
No 250
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.9e-35 Score=372.41 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=168.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|+++++||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 4899999999999999999999999999999999999998 9999999999887654 4689999999987764 9
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++.. . +.+++.+++...+.++ .++ .|++..||.+|+.+.
T Consensus 431 i~~NI~~~~~---~-----------------------~d~~i~~a~~~~gl~~------~i~--~lp~Gldt~i~e~g~- 475 (592)
T PRK10790 431 FLANVTLGRD---I-----------------------SEEQVWQALETVQLAE------LAR--SLPDGLYTPLGEQGN- 475 (592)
T ss_pred HHHHHHhCCC---C-----------------------CHHHHHHHHHHcCcHH------HHH--hccccccccccCCCC-
Confidence 9999998631 0 1112222222222111 111 267888999998654
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++|||||+.+|+|++||||||+||+.++..|.+.|++... ++|+|+ ++|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-vtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVV-IAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998643 445554 55554 6677899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 251
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.5e-35 Score=331.08 Aligned_cols=207 Identities=24% Similarity=0.255 Sum_probs=167.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc---cc-cceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE---TF-ARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~-~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.++... .. +..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 458999999999999999999999999999999999842125789999999876431 12 23489999999999999
Q ss_pred cHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 046196 940 TVYESLVYSAWLRLPP----EVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1014 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~----~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illl 1014 (1436)
|++|++.+........ ..+..+..+.++++++.+++. ...+..++ ..||||||||++||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 012223345678899999997 34454321 24999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hCeEEEEecCcEEEEEcCC
Q 046196 1015 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDA-FDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1015 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++ |++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999877899999999976 45566 799999986 788898875
No 252
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1e-34 Score=330.80 Aligned_cols=204 Identities=24% Similarity=0.370 Sum_probs=170.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-----------cccceEEEecCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-----------VPQRTSAYISQN 236 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 236 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5899999999999999999999999999999999999987 99999999887532 113569999999
Q ss_pred CCcCCCCCHHHHHHhhhhh-cCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccc
Q 046196 237 DLHIGEMTVRETLAFSARC-QGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCAD 315 (1436)
Q Consensus 237 ~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 315 (1436)
+.+++.+||+||+.++... .+. . . ......++.+++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~-~---------~------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE-P---------K------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC-C---------H------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 9888899999999875321 110 0 0 001123456788899987666
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcc
Q 046196 316 TMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFD 395 (1436)
Q Consensus 316 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 395 (1436)
+.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+.+|+.++|+..++.+++|
T Consensus 140 ~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ--EKRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcC
Confidence 544 46999999999999999999999999999999999999999999998764 24566668899999999999
Q ss_pred cEEEecCCeEEEecChhHHH
Q 046196 396 DLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 396 ~iivL~~G~iv~~G~~~~~~ 415 (1436)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 253
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.4e-35 Score=330.81 Aligned_cols=215 Identities=24% Similarity=0.327 Sum_probs=177.1
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+||++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56777776542 2358999999999999999999999999999999999876 56899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 919 QE----TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP--P---EVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 919 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~--~---~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.. ..++.++|++|++.+++.+||+||+.+....... . ....++..+.++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 21 1234699999999999999999999876432100 0 011223345678999999998766654 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 789999999976 57778999999996 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888874
No 254
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=336.08 Aligned_cols=213 Identities=24% Similarity=0.351 Sum_probs=176.1
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 46777776552 2459999999999999999999999999999999999887 56999999998763
Q ss_pred c-----ccccceEEEeecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 Q-----ETFARISGYCEQTDIH-SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~-----~~~~~~~gyv~q~~~~-~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
. ...++.++|++|++.. +...|+.||+.+..... ....++..+.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1234679999998653 34568999998764332 122333445678899999998776654 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998877899999999976 56788999999996 78888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8874
No 255
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.9e-33 Score=374.85 Aligned_cols=134 Identities=21% Similarity=0.250 Sum_probs=106.4
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 046196 935 HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1010 (1436)
Q Consensus 935 ~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~---~~p~ 1010 (1436)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44578999999876542211111223334445 47888999765 4554 3579999999999999998 6999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 046196 1011 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK-----RGGEEIYVGPL 1076 (1436)
Q Consensus 1011 illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~Gg~~~y~G~~ 1076 (1436)
+++|||||+|||+.+...+++.|++++++|.|||+++|++. .+ ..+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999976 34 8999999996 36899999975
No 256
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-35 Score=324.73 Aligned_cols=194 Identities=26% Similarity=0.343 Sum_probs=163.5
Q ss_pred cceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc-cccceEEEeecCCCCCCCCcHHHHHHH
Q 046196 869 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE-TFARISGYCEQTDIHSPHVTVYESLVY 947 (1436)
Q Consensus 869 ~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~~ 947 (1436)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999986 5689999999876431 234679999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 046196 948 SAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1027 (1436)
Q Consensus 948 ~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~ 1027 (1436)
....+.. . .+...+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5432111 1 122344578999999998776665 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1028 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1028 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
.+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999976 56778999999996 6776543
No 257
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.3e-34 Score=340.02 Aligned_cols=208 Identities=23% Similarity=0.254 Sum_probs=173.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCC--C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQND--L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~--~ 238 (1436)
.++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999997 5
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
+++.+||.||+.+..+..... ..+ .+....++.+++.+||+ +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~--------~~~------------------------~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPK--------LSR------------------------QEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccC--------CCH------------------------HHHHHHHHHHHHHcCCChHHhc--
Confidence 788999999998865322100 000 01112345678999994 3344
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+.++.|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 258
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=336.06 Aligned_cols=215 Identities=27% Similarity=0.317 Sum_probs=180.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788888876521 12359999999999999999999999999999999999987 5699999999886
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNRE-----PHRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCC-----cccCCH
Confidence 43 234567999999973 667789999998765432 223344456689999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 899999999976 34 46999999986 78999
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9975
No 259
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-34 Score=340.28 Aligned_cols=214 Identities=21% Similarity=0.251 Sum_probs=175.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc-------ceEEEecCCC--
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ-------RTSAYISQND-- 237 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q~~-- 237 (1436)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++.....+ +.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 4699999999999999999999999999999999999987423489999999988654321 3699999997
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
.+.+.+||.+++.+....... ... .+....+..+|+.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~~------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MSK------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CCH------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 678899999999865432110 000 0111234567889999764332
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+ ++.++.|||||||||+||+||+.+|++||+||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567789999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 046196 398 ILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~ 416 (1436)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 260
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.1e-34 Score=317.61 Aligned_cols=202 Identities=18% Similarity=0.299 Sum_probs=155.7
Q ss_pred CCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECC
Q 046196 835 EPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISG 914 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 914 (1436)
.|+.+-++|++|.++ +.++++++++|-|.--..+||+||||.||||||++|.|.+. |..|+.+-|-
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKnh 648 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKNH 648 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhccc
Confidence 455678888888763 45679999999999999999999999999999999999887 4577764331
Q ss_pred ccCCcccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 915 YPKNQETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 915 ~~~~~~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
+-.+|+..|+. .+...-|.-|.|.-.. +.+.++ +...+-.+||...++++- +..||
T Consensus 649 --------rL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq~----ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 649 --------RLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQE----ARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred --------eeeeechhhhhHHhhccccCHHHHHHHhc------CCChHH----HHHHhhhhhhhhccceEe----eeecC
Confidence 23478877753 3445667777775321 222222 356788899998888863 56899
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||||-||++|..-++.|+||+|||||++||.++...+-+.|++. ...||+++||-+. +.+.-..++|+.+.|.--.
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999887 4579999999763 5555567777776554444
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|..
T Consensus 783 dGdF 786 (807)
T KOG0066|consen 783 DGDF 786 (807)
T ss_pred cccH
Confidence 4443
No 261
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-35 Score=297.31 Aligned_cols=205 Identities=27% Similarity=0.384 Sum_probs=178.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||.+++. |....|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 9999999998864 334569999999999999999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||++|+.+..|+++.. ...++.+++...||++..+. ++-.|
T Consensus 93 dNvafgL~l~Gi~k~~----------------------------------R~~~a~q~l~~VgL~~~~~~-----~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ----------------------------------RREIAHQMLALVGLEGAEHK-----YIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHHH----------------------------------HHHHHHHHHHHhCccccccc-----ceEee
Confidence 9999999988865321 12345678899999987664 44579
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec--CCe
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS--DGQ 404 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~--~G~ 404 (1436)
||||||||.|||||..+|+.|+||||+++||.-|++++.+.|-++.+.. +..++.++|+.+|..-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999999887654 5566668999999999999999998 689
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
|+..=+++--..
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998877764443
No 262
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=333.58 Aligned_cols=216 Identities=25% Similarity=0.355 Sum_probs=178.1
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56778776552 2459999999999999999999999999999999999876 56899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
. ...++.++|++|+..+++.+|+.|++.+....... .....+...+.++++++.+++.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23345689999998888889999999875211000 0111122344578899999998766665 4579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777899999999986 57889999999986 6888888
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 221 ~~ 222 (255)
T PRK11231 221 TP 222 (255)
T ss_pred CH
Confidence 75
No 263
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.40 Aligned_cols=216 Identities=26% Similarity=0.386 Sum_probs=175.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCC-cCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL-HIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~ 242 (1436)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 34899999999999999999999999999999999999998 9999999998765332 356999999973 6778
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
.||+||+.++.+..+.. . .+....++++++.+||++..++.+
T Consensus 97 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------R------------------------EEMVERVDQALRQVGMEDFLNREP---- 138 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCc----
Confidence 89999999864332110 0 001123567889999987777655
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++.. .+++|++++|+..++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 139 -HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998653 3566666788887775 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 046196 403 GQIVYQGPRENVLE---FFERMGFKCP 426 (1436)
Q Consensus 403 G~iv~~G~~~~~~~---~f~~~G~~~p 426 (1436)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3444455444
No 264
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.7e-35 Score=327.50 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=161.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 9999999998765331 3469999999988
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++.+||+||+.++....+.. . ......++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------K------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 99999999999875432210 0 001123456788999987666554
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++. .||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 469999999999999999999999999999999999999999999998642 2456666788887775 9999999
Q ss_pred ecCCeE
Q 046196 400 LSDGQI 405 (1436)
Q Consensus 400 L~~G~i 405 (1436)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 265
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.7e-33 Score=362.98 Aligned_cols=123 Identities=25% Similarity=0.323 Sum_probs=102.1
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---Ccce
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1013 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p---~ill 1013 (1436)
++||.|++.|...+. . .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 1123678899999753 3443 3579999999999999999999 9999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK-----RGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446899999994 47899999975
No 266
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.3e-35 Score=323.58 Aligned_cols=192 Identities=28% Similarity=0.364 Sum_probs=161.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCC-cCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDL-HIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~-~~~~lTV 245 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 45999999999999999999999999999999999999988 9999999988754333457999999963 3557899
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.++....+ . ....++.+++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987542110 0 0012456788999987776555 46
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA--QGKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 355666688988899999999999999997
Q ss_pred E
Q 046196 406 V 406 (1436)
Q Consensus 406 v 406 (1436)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 267
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=330.13 Aligned_cols=221 Identities=25% Similarity=0.330 Sum_probs=176.3
Q ss_pred CceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC---CCceeEEEEE
Q 046196 836 PHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYVSGSITI 912 (1436)
Q Consensus 836 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i 912 (1436)
|..++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34688999987763 2358999999999999999999999999999999999753 1136899999
Q ss_pred CCccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046196 913 SGYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPG 987 (1436)
Q Consensus 913 ~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~ 987 (1436)
+|.++.. ...++.++|++|+..+++ .||+||+.+....+.. ...+...+.++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987642 123567999999988887 5999999886543211 1222334567888999988542111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999999854 799999999976 56788999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 688888864
No 268
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6.8e-35 Score=327.50 Aligned_cols=198 Identities=25% Similarity=0.380 Sum_probs=166.9
Q ss_pred cccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHHHHH
Q 046196 867 LKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYESLV 946 (1436)
Q Consensus 867 L~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 946 (1436)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999986 57999999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHH
Q 046196 947 YSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1026 (1436)
Q Consensus 947 ~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~ 1026 (1436)
+......+ ..+.++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 223334455678899999998766655 457999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1027 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1027 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999996 688877754
No 269
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-35 Score=322.69 Aligned_cols=196 Identities=29% Similarity=0.408 Sum_probs=165.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--ccceEEEecCCCCcCCCCCH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lTV 245 (1436)
++|+|+|+++++| +++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 5999999999999 99999999999999999999999998 999999998875432 23569999999988999999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.+.....+.. + .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIP----------S------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCC----------H------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 99998864432110 0 001123456788999987777655 45
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
|||||||||+||+|++.+|++++|||||+|||+.+..++.+.|++++. + ++++.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5677788999889899999999999999
Q ss_pred EEec
Q 046196 406 VYQG 409 (1436)
Q Consensus 406 v~~G 409 (1436)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 270
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-34 Score=319.26 Aligned_cols=196 Identities=31% Similarity=0.581 Sum_probs=163.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCcc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYP 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 916 (1436)
.++|+|++|.++.+ .+++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999988532 13456999999999999999999999999999999999987633 579999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 917 KNQ--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 917 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
+.. ...++.++|++|++.+++.+||+|++.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998653211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 677777766643467889999999996 677765
Q ss_pred c
Q 046196 1074 G 1074 (1436)
Q Consensus 1074 G 1074 (1436)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 271
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=322.10 Aligned_cols=233 Identities=24% Similarity=0.304 Sum_probs=188.0
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC-C-CCCcceEEEECCccCCCccc-------cceEEEecCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG-K-DLKFSGRVTYNGHGMEEFVP-------QRTSAYISQN 236 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 236 (1436)
..++++||||++++||+++|+|.|||||||+.++|+|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33468999999998755442 2479999999
Q ss_pred --CCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccc
Q 046196 237 --DLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCA 314 (1436)
Q Consensus 237 --~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 314 (1436)
..+-|.+||.+.+.-..+..... . ..++....+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~---------~-----------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKG---------L-----------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcc---------h-----------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 46788889988886544321100 0 0111233456689999998643
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhc
Q 046196 315 DTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELF 394 (1436)
Q Consensus 315 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 394 (1436)
. +-+.++..|||||||||.||.||+.+|++||.||||++||..+..+|++.|+++.+ ..+++++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 33678899999999999999999999999999999999999999999999999987 45788888999999999999
Q ss_pred ccEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCCHHHHHHHhcCc
Q 046196 395 DDLILLSDGQIVYQGPRENVLEFFERMGFKCPERKGVADFLQEVTSR 441 (1436)
Q Consensus 395 D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~ 441 (1436)
|+|+||..|+||+.|+.+++. .-|.+.-....+..+.+.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P~~ 260 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLPRL 260 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCccc
Confidence 999999999999999999874 456555555555554433
No 272
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.76 Aligned_cols=217 Identities=24% Similarity=0.332 Sum_probs=175.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.. ....+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 6788887765310 0011359999999999999999999999999999999999876 57999999998764
Q ss_pred c-------ccccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 046196 919 Q-------ETFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGV 988 (1436)
Q Consensus 919 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~ 988 (1436)
. ...++.++|++|+. .+++ .||+||+.+..... ..+.++..+.++++++.+++.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 22456789999986 3444 69999998764332 1223334456788999999963 44443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877899999999976 56778999999996 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888874
No 273
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.3e-35 Score=399.11 Aligned_cols=213 Identities=22% Similarity=0.351 Sum_probs=174.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC---------------------------------------
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--------------------------------------- 207 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 207 (1436)
.++|+|+|++|+||+.+||+||||||||||+++|+|+++|+
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999982
Q ss_pred ------------CCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHH
Q 046196 208 ------------LKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRRE 272 (1436)
Q Consensus 208 ------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 272 (1436)
...+|+|++||+++++... ++.++||+|++.+| +.||+|||.++.
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~------------------- 1320 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGK------------------- 1320 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCC-------------------
Confidence 0138999999999987664 46799999999865 679999999973
Q ss_pred HHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCC
Q 046196 273 KAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEI 352 (1436)
Q Consensus 273 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEp 352 (1436)
|+.+.+++.+|++.++.+.. +..|++++||.||+++. .||||||||++|||||+++|+|||||||
T Consensus 1321 ------~~at~eeI~~A~k~A~l~~f--------I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1321 ------EDATREDVKRACKFAAIDEF--------IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred ------CCCCHHHHHHHHHHcCCHHH--------HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 22233445555555444332 23589999999997665 5999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC----CeEE-EecChhHHHH
Q 046196 353 STGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD----GQIV-YQGPRENVLE 416 (1436)
Q Consensus 353 tsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~----G~iv-~~G~~~~~~~ 416 (1436)
||+||+.++..|.+.|++.....++|+|+ +.|.. ++.+.||+|++|++ |+++ ++|+++|+++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEE-EechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999864212445444 56654 67788999999999 9955 8999999864
No 274
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=334.09 Aligned_cols=217 Identities=21% Similarity=0.293 Sum_probs=179.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578889887763 2359999999999999999999999999999999999976 5689999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.++|++|+..+++..|++|++.+......+. ....+...+.++++++.+++.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 223456899999998888999999998642111000 001123345678899999998766654 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57889999999986 78889
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 225 ~g~~ 228 (265)
T PRK10253 225 QGAP 228 (265)
T ss_pred eCCH
Confidence 9875
No 275
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=327.41 Aligned_cols=206 Identities=21% Similarity=0.366 Sum_probs=171.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 35999999999999999999999999999999999999987 9999999988754332 3569999999988888
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.+..+.... ... .+....++.+++.+||++..+..
T Consensus 93 ~tv~enl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LSA------------------------EQREDRANELMEEFHIEHLRDSM----- 134 (241)
T ss_pred CcHHHHHhhhhhcccc---------cCH------------------------HHHHHHHHHHHHHcCCHHHhhcc-----
Confidence 9999999876432100 000 00112345678889998665544
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
.+.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.++++.. .+.+++.++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 135 GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 345666688888899999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 276
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1e-34 Score=332.83 Aligned_cols=219 Identities=27% Similarity=0.362 Sum_probs=179.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCcc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYP 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 916 (1436)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 477888877652 245999999999999999999999999999999999987643 236999999987
Q ss_pred CCc--------ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 046196 917 KNQ--------ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPP-----EVDSDTRKMFVEEVMELVELNPIREALV 983 (1436)
Q Consensus 917 ~~~--------~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~-----~~~~~~~~~~v~~vl~~l~l~~~~~~~~ 983 (1436)
+.. ...++.++|++|+..+++.+||+||+.+......+. ....++....++++++.+++.+..+..
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 149 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR- 149 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-
Confidence 532 123456899999999899999999998753211000 011123345678999999998766665
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEE
Q 046196 984 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELL 1062 (1436)
Q Consensus 984 g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1062 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|+++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 150 ----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred ----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999999754 899999999986 4778899999
Q ss_pred EEecCcEEEEEcCC
Q 046196 1063 LMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1063 ~l~~Gg~~~y~G~~ 1076 (1436)
+|++ |++++.|+.
T Consensus 225 ~l~~-g~i~~~g~~ 237 (262)
T PRK09984 225 ALRQ-GHVFYDGSS 237 (262)
T ss_pred EEEC-CEEEEeCCH
Confidence 9996 688888875
No 277
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.06 Aligned_cols=213 Identities=24% Similarity=0.367 Sum_probs=174.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47889988765310 001248999999999999999999999999999999999976 5699999999876
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046196 918 NQET------F-ARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSG 990 (1436)
Q Consensus 918 ~~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~ 990 (1436)
.... . ++.++|++|+..+++.+|+.||+.+....+ .....+..+.++++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 4311 1 246999999998889999999998765432 122334455688999999998766654 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999976 34 56999999986 56
Q ss_pred EEE
Q 046196 1070 EIY 1072 (1436)
Q Consensus 1070 ~~y 1072 (1436)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 653
No 278
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.79 Aligned_cols=217 Identities=21% Similarity=0.265 Sum_probs=177.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887652 235899999999999999999999999999999999987632 2699999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|+..+++.+||+||+.+....+. ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87631 2345679999999989999999999987654321 1123334456788899998842 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 468999999999999999999999999999999999999999999999864 689999999976 5778899999997
Q ss_pred c-----CcEEEEEcCC
Q 046196 1066 R-----GGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~-----Gg~~~y~G~~ 1076 (1436)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4799999875
No 279
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.25 Aligned_cols=215 Identities=23% Similarity=0.317 Sum_probs=179.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5788998876521 12458999999999999999999999999999999999987 5689999999886
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++....++++++.+++.+..++. ++.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCC-----cccCCH
Confidence 43 234567999999964 567899999998764322 123334455678999999998777665 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5899999999863 4 47999999986 78888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 280
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-35 Score=333.40 Aligned_cols=217 Identities=27% Similarity=0.371 Sum_probs=178.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478888887652 2359999999999999999999999999999999999876 5689999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ..+++.++|++|+..+++.+|+.||+.+....... .........+.++++++.+++.+..+.. +..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----VDSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCH
Confidence 32 23456799999998888899999999875321100 0011122344578899999998766655 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 57788999999986 78888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 281
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.2e-35 Score=327.36 Aligned_cols=198 Identities=27% Similarity=0.331 Sum_probs=165.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 459999999999999999999999999999999999987 5799999999876421 1245689999999999999
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 940 TVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVE-LNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~-l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
|+.|++.+....+. .. ..+..+++++.++ +.+..+.. ++.||||||||++||++|+.+|++++|||||
T Consensus 91 tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt 159 (230)
T TIGR03410 91 TVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPT 159 (230)
T ss_pred cHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999987654321 11 1223567777776 45444544 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~ 216 (230)
T TIGR03410 160 EGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAG 216 (230)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999998764 899999999976 56678999999986 788898875
No 282
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.71 Aligned_cols=220 Identities=22% Similarity=0.272 Sum_probs=178.5
Q ss_pred CCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--C-CceeEE
Q 046196 833 PFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYVSGS 909 (1436)
Q Consensus 833 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~-~~~~G~ 909 (1436)
|.+...++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+
T Consensus 8 ~~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~ 74 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE 74 (260)
T ss_pred cCCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE
Confidence 33455688999987763 2358999999999999999999999999999999999864 2 146899
Q ss_pred EEECCccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccc
Q 046196 910 ITISGYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IRE 980 (1436)
Q Consensus 910 i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~ 980 (1436)
|.++|.++.. ..+++.++|++|+..+++ .|++||+.+...... ..+.++..+.++++++.+++.+ ..+
T Consensus 75 i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 75 ILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred EEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHh
Confidence 9999987632 234567999999988777 899999987653221 1223333456788999998843 223
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCe
Q 046196 981 ALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDE 1060 (1436)
Q Consensus 981 ~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1060 (1436)
.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|+
T Consensus 152 ~~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 152 QS-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred cC-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 22 46799999999999999999999999999999999999999999999986 4789999999976 56778999
Q ss_pred EEEEecCcEEEEEcCC
Q 046196 1061 LLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1061 v~~l~~Gg~~~y~G~~ 1076 (1436)
+++|++ |+++..|+.
T Consensus 225 i~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 225 TAFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999996 788888874
No 283
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=8e-34 Score=321.38 Aligned_cols=173 Identities=25% Similarity=0.313 Sum_probs=138.3
Q ss_pred cccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcHHHHHH
Q 046196 867 LKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTVYESLV 946 (1436)
Q Consensus 867 L~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 946 (1436)
|.-=.++|..||+++++||||-||||+.++|+|..+ |++|+ .. .-.++|=||--.-..+.||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 333457888999999999999999999999999987 46776 11 124688888766667889999876
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHH
Q 046196 947 YSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1026 (1436)
Q Consensus 947 ~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~ 1026 (1436)
-...-+... ..+..++++-|.|..+.+..+ .+|||||.|||+||.+|.+++++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 433221111 123468888999998888764 58999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 1027 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 1027 ~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
..+-+.||+... +++|.+++-||.-+ +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999875 47899999999653 334678888886
No 284
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=9.2e-35 Score=344.29 Aligned_cols=203 Identities=22% Similarity=0.298 Sum_probs=175.2
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc----CCc---cc---c-cceEEEee
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP----KNQ---ET---F-ARISGYCE 930 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv~ 930 (1436)
+...+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+ +.. .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 34568999999999999999999999999999999999987 579999999962 211 11 1 24699999
Q ss_pred cCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 046196 931 QTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPS 1010 (1436)
Q Consensus 931 q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~ 1010 (1436)
|+..++|.+||+||+.|....+ ..+..++.+.++++++.+||.+..+.. +..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~-----~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKK-----PGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 233455566789999999998877765 35799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1011 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1011 illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999765 899999999986 57789999999996 789999975
No 285
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.4e-34 Score=332.07 Aligned_cols=223 Identities=23% Similarity=0.312 Sum_probs=178.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++.....+ ..+++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67788877653110000 0113469999999999999999999999999999999999987 57999999998764
Q ss_pred cc------cccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046196 919 QE------TFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVS 989 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~ 989 (1436)
.. ..++.++|++|++ .+.+.+||+|++.+..... .....+...+.++++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1345799999986 4667899999997654321 1122233445678999999995 555554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999976 56678999999985 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 89998875
No 286
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.92 Aligned_cols=214 Identities=28% Similarity=0.358 Sum_probs=177.4
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56777776652 12358999999999999999999999999999999999886 56899999998763
Q ss_pred c-----ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 Q-----ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
. ...++.++|++|+.. .+...||.|++.+..... ....++..+.+.++++.++|.+..++. ++.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKP-----PHHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCC-----hhhCC
Confidence 1 123567999999863 334579999998764321 123344455678899999998877765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999976 56778999999996 78888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 287
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=328.58 Aligned_cols=219 Identities=23% Similarity=0.306 Sum_probs=174.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCC---CCCceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 914 (1436)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888877652 235899999999999999999999999999999999962 3212489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.+++.+..+.... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 233567999999988776 6999999876543311 1122234557889999998642211111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999985 4799999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999975
No 288
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-34 Score=316.82 Aligned_cols=190 Identities=55% Similarity=0.942 Sum_probs=161.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46788888776311 012458999999999999999999999999999999999753235799999999876
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
. ...++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 5 33456799999999889999999999864311 0 49999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++...+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887789999999998644678899999998657888865
No 289
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=327.72 Aligned_cols=201 Identities=27% Similarity=0.381 Sum_probs=167.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999988 99999999887542 24589999999888889999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.++....+.. . .+....++.+++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 9998864322110 0 001123456788999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec--CCe
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS--DGQ 404 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~--~G~ 404 (1436)
||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.++||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999987543 35566668899999999999999998 599
Q ss_pred EEEecChh
Q 046196 405 IVYQGPRE 412 (1436)
Q Consensus 405 iv~~G~~~ 412 (1436)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988654
No 290
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.4e-34 Score=326.23 Aligned_cols=201 Identities=30% Similarity=0.420 Sum_probs=168.6
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEee-cCCCCCCC
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCE-QTDIHSPH 938 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-q~~~~~~~ 938 (1436)
+.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |.+.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34569999999999999999999999999999999999876 569999999986432 23456789997 55677789
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 939 VTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
+|++|++.+....+ ....++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTP-----VRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765433 122333445678899999998777765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 56788999999986 6777654
No 291
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=324.66 Aligned_cols=201 Identities=29% Similarity=0.408 Sum_probs=171.8
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc-cccceEEEeecCCCCCCCCcHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE-TFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+...++.+|+.
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 359999999999999999999999999999999999987 5689999999876432 1245789999999888899999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
||+.+....+. .......+.++++++.+++.+..+.. +..||+|||||++|||+|+.+|++++|||||+|||
T Consensus 91 ~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 22233344578899999998777665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1023 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999998764 899999999975 57788999999996 688888863
No 292
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=335.90 Aligned_cols=206 Identities=24% Similarity=0.333 Sum_probs=171.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCC--c---cccceEEEecCCCC-cCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEE--F---VPQRTSAYISQNDL-HIG 241 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~~~-~~~ 241 (1436)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999999987 9999999998741 1 12356999999863 345
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
..||+||+.++....+.. . .+....++++++.+||.+..++.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhCCc---
Confidence 689999998864322110 0 001123567889999987766554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.++||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 25566668899999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|++++.|+++++.+
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988754
No 293
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=337.67 Aligned_cols=214 Identities=19% Similarity=0.225 Sum_probs=172.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CcceEEEECCccCCCccc-------cceEEEecCCC-
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL-KFSGRVTYNGHGMEEFVP-------QRTSAYISQND- 237 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~- 237 (1436)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... .+.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987421 138999999998765432 13599999997
Q ss_pred -CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 238 -LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 238 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
.+.+.+||.+++......... ..+ .+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~~~------------------------~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------GNK------------------------KTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------CCH------------------------HHHHHHHHHHHHHCCCCChHH-
Confidence 478899999998765432100 000 011234566899999975221
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
+-++.++.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 113456679999999999999999999999999999999999999999999998653 356777789999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 046196 397 LILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~~ 416 (1436)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999998853
No 294
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-34 Score=331.35 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=177.0
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45677766542 2459999999999999999999999999999999999876 56899999998764
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
. ...++.++|++|+..+++.+||+||+.+....... .....++..+.+.++++.+++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHH
Confidence 3 22345689999998778889999999875211000 0011122334678899999998766665 4579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999986 57789999999996 6888888
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 75
No 295
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-34 Score=324.12 Aligned_cols=202 Identities=26% Similarity=0.345 Sum_probs=166.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 35999999999999999999999999999999999999997 9999999988754322 3469999999988999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhC-CcccccccccCc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILG-LEVCADTMVGDE 321 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 321 (1436)
+||+||+.++.+..+.. . ....+.+++.++ +++..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCC----
Confidence 99999998864321100 0 001233455565 44444444
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+. .+++++.++|+..++.+++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999987642 35566668899999999999999999
Q ss_pred CCeEEEecChhHH
Q 046196 402 DGQIVYQGPRENV 414 (1436)
Q Consensus 402 ~G~iv~~G~~~~~ 414 (1436)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 296
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=329.71 Aligned_cols=224 Identities=24% Similarity=0.278 Sum_probs=180.3
Q ss_pred CCCCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC---CceeEE
Q 046196 833 PFEPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYVSGS 909 (1436)
Q Consensus 833 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~---~~~~G~ 909 (1436)
|..+..++++|+++.++ .+.+|+|+|+++++||++||+|+|||||||||++|+|..++ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 44455789999988763 24599999999999999999999999999999999998753 146899
Q ss_pred EEECCccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc
Q 046196 910 ITISGYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVG 984 (1436)
Q Consensus 910 i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g 984 (1436)
|.++|.++.. ...++.++|++|+..+++ .||+||+.+..... + ....+...+.++++++.+++.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567999999988777 69999998764322 1 11233344567888999988532212222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 985 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 985 ~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
. .+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.+|++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2 256899999999999999999999999999999999999999999999985 4799999999986 577899999999
Q ss_pred ecCcEEEEEcCC
Q 046196 1065 KRGGEEIYVGPL 1076 (1436)
Q Consensus 1065 ~~Gg~~~y~G~~ 1076 (1436)
++ |+++..|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 789999885
No 297
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=316.55 Aligned_cols=179 Identities=42% Similarity=0.733 Sum_probs=153.8
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC---CCCCcceEEEECCccCCCcc--ccceEEEecCCCCcC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG---KDLKFSGRVTYNGHGMEEFV--PQRTSAYISQNDLHI 240 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~ 240 (1436)
++.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 19 ~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~ 95 (202)
T cd03233 19 KIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHF 95 (202)
T ss_pred CceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccC
Confidence 3569999999999999999999999999999999999998 55 999999999876432 245799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++.+.. . +
T Consensus 96 ~~~tv~~~l~~~~~~~---------------------------------------------------------~-----~ 113 (202)
T cd03233 96 PTLTVRETLDFALRCK---------------------------------------------------------G-----N 113 (202)
T ss_pred CCCcHHHHHhhhhhhc---------------------------------------------------------c-----c
Confidence 9999999998753210 1 1
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.+++++.||+.+++.+.+|++++|
T Consensus 114 ~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l 193 (202)
T cd03233 114 EFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVL 193 (202)
T ss_pred cchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEE
Confidence 22346999999999999999999999999999999999999999999999865334566776777778999999999999
Q ss_pred cCCeEEEec
Q 046196 401 SDGQIVYQG 409 (1436)
Q Consensus 401 ~~G~iv~~G 409 (1436)
++|++++.|
T Consensus 194 ~~G~i~~~g 202 (202)
T cd03233 194 YEGRQIYYG 202 (202)
T ss_pred ECCEEEecC
Confidence 999998765
No 298
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=325.26 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=166.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 3469999999988888
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKIL-GLEVCADTMVGDE 321 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 321 (1436)
+||+||+.++..... . + + ....++.+++.+ +|.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999988632110 0 0 0 001123345555 355444433
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
++.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. ++.+|+.++|+..++.+.+|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE--QGMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 356999999999999999999999999999999999999999999998764 24566668899889999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998874
No 299
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=337.65 Aligned_cols=225 Identities=24% Similarity=0.278 Sum_probs=182.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 47889988776421100 0 00112469999999999999999999999999999999999986 4689999999886
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 046196 918 NQE------TFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGV 988 (1436)
Q Consensus 918 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~ 988 (1436)
... .+++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 58899999999876544321 2334455667899999999963 44443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
..||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+.+ .+...+|+|++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 689999999999999999999999999999999999999999999999764 899999999976 46678999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 300
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=331.13 Aligned_cols=215 Identities=25% Similarity=0.307 Sum_probs=179.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5889998876531 11348999999999999999999999999999999999987 5699999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.++|++|++. +++..|+.+++.+..... ....++..+.++++++.+++.+..+.. ++.||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677889999998764322 122333445678899999998776654 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 455 4999999986 78999
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 9875
No 301
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.09 Aligned_cols=203 Identities=26% Similarity=0.380 Sum_probs=169.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCC-cCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDL-HIGE 242 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~-~~~~ 242 (1436)
++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4999999999999999999999999999999999999987 9999999998754321 356999999965 4677
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
.||+||+.|+.+..+.. . .+....++.+++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------P------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 89999999865322110 0 001123456788999987777655
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.. .+++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998764 356677788888887 57999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999998864
No 302
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.3e-34 Score=319.67 Aligned_cols=198 Identities=25% Similarity=0.301 Sum_probs=166.7
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-ccccceEEEeecCCCCCCCCcHHHH
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-ETFARISGYCEQTDIHSPHVTVYES 944 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~lTv~e~ 944 (1436)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 4679999999999999999999999999999999987 569999999987642 2345679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHH
Q 046196 945 LVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1024 (1436)
Q Consensus 945 l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~ 1024 (1436)
+.+...... . ......+.++++++.+++.+..++. ++.||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 1 1112234578899999998766665 4579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcC
Q 046196 1025 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGP 1075 (1436)
Q Consensus 1025 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~ 1075 (1436)
++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999976 56778999999985 78887763
No 303
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.8e-35 Score=323.15 Aligned_cols=195 Identities=24% Similarity=0.355 Sum_probs=163.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999999987 999999998875432 135699999999889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++.+..+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------P------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999999875432110 0 001123456788899987766554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
.+||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.+ .+++++.++|+..++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK--AGTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999754 3556777889888898999999999
Q ss_pred cCCeE
Q 046196 401 SDGQI 405 (1436)
Q Consensus 401 ~~G~i 405 (1436)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 304
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.2e-34 Score=324.97 Aligned_cols=206 Identities=23% Similarity=0.369 Sum_probs=168.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 4899999999999999999999999999999999999763 12379999999987542 1135799999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE----VCADT 316 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 316 (1436)
+ +||+||+.++.+..+... . .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------K------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 999999998654321000 0 00112345678889997 44444
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
. ++.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ + .+++.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999998754 3 5666688999899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 046196 397 LILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~ 415 (1436)
|++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 305
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=326.72 Aligned_cols=194 Identities=20% Similarity=0.284 Sum_probs=164.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRE 247 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E 247 (1436)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 4899999999999999999999999999999999999987 9999999976543 2456999999998888899999
Q ss_pred HHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 046196 248 TLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGIS 327 (1436)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 327 (1436)
|+.++... . ....++.+++.+||++..+..+ ..||
T Consensus 101 nl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 99875210 0 0012345788899987665544 5699
Q ss_pred hhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEE
Q 046196 328 GGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVY 407 (1436)
Q Consensus 328 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~ 407 (1436)
|||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+. .+.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999987543 34566668899888999999999999999999
Q ss_pred ecChh
Q 046196 408 QGPRE 412 (1436)
Q Consensus 408 ~G~~~ 412 (1436)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 306
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.1e-34 Score=323.43 Aligned_cols=232 Identities=24% Similarity=0.293 Sum_probs=179.2
Q ss_pred EeeceeEEEEEecCCCcCCCchhhHHHHHHHHhhhhcccCCCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHh
Q 046196 122 RFEHLNVEAEAYIGSRALPTVFNSCANMLEGFLNYLHVLPSRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALA 201 (1436)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~ 201 (1436)
+.+|++.++.... ..+++.+...+.+ ..+...+++|+|+|+++++|++++|+|||||||||||++|+
T Consensus 2 ~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~ 68 (236)
T cd03267 2 EVSNLSKSYRVYS---KEPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILS 68 (236)
T ss_pred ceecchhhccCcC---CccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 4567777765432 2233333333322 12223456999999999999999999999999999999999
Q ss_pred cCcCCCCCcceEEEECCccCCCc--cccceEEEec-CCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCC
Q 046196 202 GKLGKDLKFSGRVTYNGHGMEEF--VPQRTSAYIS-QNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIK 278 (1436)
Q Consensus 202 G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (1436)
|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 69 Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~------------------ 127 (236)
T cd03267 69 GLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP------------------ 127 (236)
T ss_pred CCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH------------------
Confidence 999998 99999999875332 1235789998 55677788999999988644321100
Q ss_pred CCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCCh
Q 046196 279 PDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDS 358 (1436)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~ 358 (1436)
.+....++.+++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||+
T Consensus 128 ----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 128 ----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred ----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 0011234567888999988887664 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEec
Q 046196 359 STTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQG 409 (1436)
Q Consensus 359 ~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G 409 (1436)
.++..+.+.|+++++. ++.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 187 ~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 187 VAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998653 3456666888888899999999999999998765
No 307
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=361.64 Aligned_cols=221 Identities=21% Similarity=0.300 Sum_probs=184.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+||||+|++||+++|+||||||||||+++|+|..++++.+|+|.++|.++
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 478888887652 2459999999999999999999999999999999999876434699999999876
Q ss_pred Cccc----ccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQET----FARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~~~----~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.... .++.+||++|+..+++.+||+|++.+....+.....+.++..+.++++++.+++.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATP-----VGNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccc-----hhhCCH
Confidence 4321 2356999999998899999999998765332111112333445688999999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|+++ .+...+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999976 56778999999996 789999
Q ss_pred cCCCc
Q 046196 1074 GPLGR 1078 (1436)
Q Consensus 1074 G~~~~ 1078 (1436)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98643
No 308
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=325.46 Aligned_cols=220 Identities=21% Similarity=0.298 Sum_probs=176.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--CC-ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 477888877652 2359999999999999999999999999999999999864 21 3589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ..+++.++|++|+..+++.+|++||+.+...... ....++..+.++++++.+++......... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 2345679999999999999999999987543321 11222334457888999998542111111 1256
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999975 689999999976 56788999999985 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9898875
No 309
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=334.68 Aligned_cols=219 Identities=19% Similarity=0.309 Sum_probs=176.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++.. ......+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKK--------TPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCC--------CccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 57889988776310 0001348999999999999999999999999999999999987 5689999999875
Q ss_pred Cc--------ccccceEEEeecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 046196 918 NQ--------ETFARISGYCEQTDIH-SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPG 987 (1436)
Q Consensus 918 ~~--------~~~~~~~gyv~q~~~~-~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~ 987 (1436)
.. ...++.++|++|++.. ....|++||+.|..... ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345679999998632 23469999998764322 122333445678889999994 455544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
++.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998764 899999999976 57788999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 788888874
No 310
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=336.32 Aligned_cols=224 Identities=17% Similarity=0.215 Sum_probs=179.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC-C-ceeEEEEECCc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YVSGSITISGY 915 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~ 915 (1436)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 36788888776321 1124699999999999999999999999999999999998752 1 46899999998
Q ss_pred cCCcc---cc----cceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 046196 916 PKNQE---TF----ARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLP 986 (1436)
Q Consensus 916 ~~~~~---~~----~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~ 986 (1436)
++... .+ ++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+... .
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~ 149 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--V 149 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--C
Confidence 86431 11 23699999997 47899999988866543321 2234455667899999999975322211 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
.+.+|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|+|++|.
T Consensus 150 ~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~ 228 (326)
T PRK11022 150 YPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY 228 (326)
T ss_pred CchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2468999999999999999999999999999999999999999999999976 4899999999976 4667899999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|+.
T Consensus 229 ~-G~ive~g~~ 238 (326)
T PRK11022 229 A-GQVVETGKA 238 (326)
T ss_pred C-CEEEEECCH
Confidence 5 799999974
No 311
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.3e-34 Score=336.88 Aligned_cols=224 Identities=21% Similarity=0.289 Sum_probs=181.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-ceeEEEEECCcc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YVSGSITISGYP 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 916 (1436)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58899988766321 12246999999999999999999999999999999999998632 138999999988
Q ss_pred CCc---cc---cc-ceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046196 917 KNQ---ET---FA-RISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPG 987 (1436)
Q Consensus 917 ~~~---~~---~~-~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~ 987 (1436)
+.. .. ++ +.++|++|++ .+.|.+|+.+++........ ..+.++..+++.++++.++|.+..+... ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~--~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMK--MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhc--CC
Confidence 643 11 12 4699999997 67899999999876544321 2334455567889999999975433221 23
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
+.+||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+...+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5789999999999999999999999999999999999999999999999765 899999999976 46678999999985
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 312
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=329.79 Aligned_cols=220 Identities=24% Similarity=0.277 Sum_probs=176.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC---CceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 688999988763 23589999999999999999999999999999999998753 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ..+++.++|++|++.+++. ||.||+.+....+.. .....+..+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2245678999999887774 999999886543311 11222334567889999999642111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999976 46678999999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 8888874
No 313
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=333.05 Aligned_cols=217 Identities=23% Similarity=0.289 Sum_probs=179.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCc-eeEEEEECCcc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-VSGSITISGYP 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 916 (1436)
.++++|+++.++. .++.+|+|||++|++||++||+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788888876531 12359999999999999999999999999999999999876321 13999999988
Q ss_pred CCc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 917 KNQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
+.. ...++.+||++|++. .++..||+||+.|..... ..+.++..+.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 743 224567999999974 567899999998764322 233444556688999999998776665 46899
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 8999999999863 4 57999999986 7899
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99975
No 314
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=335.59 Aligned_cols=210 Identities=21% Similarity=0.302 Sum_probs=169.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|+++++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998631 01289999999988532 2246799999999866
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.||+||+.|+....+... .+ .....+..+++.++|.+..++.+++
T Consensus 176 -~~ti~eNi~~~~~~~~~~~----------~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND----------RK-----------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh----------HH-----------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 5899999998753321100 00 0011234456777776555566654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
...+|||||||||+||||++.+|+||||||||+|||+.+...+.+.|+++.+ +.++++++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998753 356777889998899999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999984
No 315
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=335.38 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=173.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCC--C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQND--L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~--~ 238 (1436)
.++|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999999887 9999999998765432 35699999997 5
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV-CADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 317 (1436)
+.+.+||.+++....+.... ..+ .+....+.++|+.+||+. ..++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSA------------------------AERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCH------------------------HHHHHHHHHHHHHCCCChHHhcC-
Confidence 78889999999875432110 000 011224567899999963 4554
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
.++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45679999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 046196 398 ILLSDGQIVYQGPRENVLE 416 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~~ 416 (1436)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 316
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.1e-35 Score=290.36 Aligned_cols=198 Identities=28% Similarity=0.399 Sum_probs=170.0
Q ss_pred CccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc------c-ccceEEEeecCC
Q 046196 861 DDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE------T-FARISGYCEQTD 933 (1436)
Q Consensus 861 ~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~q~~ 933 (1436)
.....||++|++.|++||-+||+|||||||||||-+|+|+.. +.+|+|.+.|++.... . ..+.+|+|+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 456789999999999999999999999999999999999987 5799999999986431 1 346799999999
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 046196 934 IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1013 (1436)
Q Consensus 934 ~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~ill 1013 (1436)
.+.|++|..||+...+.++... ..+......+.++.+||.+-.+.+ +.+|||||+|||+||||++..|+|||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLf 169 (228)
T COG4181 98 HLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLF 169 (228)
T ss_pred eccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEe
Confidence 9999999999999877776422 222334567899999998766655 46899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
-||||-+||..+...|.+++-.+.+ .|.|.|++||||. ...-|||.+-|.. |+++
T Consensus 170 ADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 170 ADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999988864 4999999999975 6678999999986 5654
No 317
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.2e-34 Score=322.42 Aligned_cols=194 Identities=28% Similarity=0.398 Sum_probs=162.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999999887 999999999876532 135699999999888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999998744321100 001123456788999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+++++.++|+..++..+||++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK--RGTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEEEEe
Confidence 46999999999999999999999999999999999999999999999754 3456777889999999999999999
Q ss_pred cCCe
Q 046196 401 SDGQ 404 (1436)
Q Consensus 401 ~~G~ 404 (1436)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 318
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.3e-34 Score=320.23 Aligned_cols=189 Identities=23% Similarity=0.357 Sum_probs=161.5
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC---c----ccccceEEEeecCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN---Q----ETFARISGYCEQTDIHS 936 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~q~~~~~ 936 (1436)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 459999999999999999999999999999999999886 56899999998743 1 12346799999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 046196 937 PHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1016 (1436)
Q Consensus 937 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDE 1016 (1436)
+.+|++||+.+..... .....+..+.++++++.+++.+..+.. +.+||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQK-----IYELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 122333445678999999998776665 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 1017 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 1017 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777899999999975 44689999875
No 319
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=329.44 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc---ccceEEEecCCCC-cCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV---PQRTSAYISQNDL-HIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~ 242 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999875432 2356999999963 5778
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++....+.. . .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------P------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 99999998864321100 0 001123566789999987776655
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++... ++++++.++|+..++ ..+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~-~~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEA-ILADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHH-hhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998642 335666677777776 47999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 320
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=326.40 Aligned_cols=205 Identities=21% Similarity=0.278 Sum_probs=169.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc----------------cccceE
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF----------------VPQRTS 230 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 230 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 35999999999999999999999999999999999999987 89999999876421 113569
Q ss_pred EEecCCCCcCCCCCHHHHHHhhhh-hcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhC
Q 046196 231 AYISQNDLHIGEMTVRETLAFSAR-CQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILG 309 (1436)
Q Consensus 231 ~yv~Q~~~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 309 (1436)
+|++|++.+++.+||+||+.++.. ..+. .. ......+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGL----------SK------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCC----------CH------------------------HHHHHHHHHHHHHcC
Confidence 999999998989999999987532 1110 00 001123456788999
Q ss_pred Ccccc-cccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCch
Q 046196 310 LEVCA-DTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAP 388 (1436)
Q Consensus 310 L~~~~-dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~ 388 (1436)
|++.. +. .++.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.. .+.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHH
Confidence 97643 43 3457999999999999999999999999999999999999999999998754 3566666889998
Q ss_pred hHHHhcccEEEecCCeEEEecChhHHH
Q 046196 389 ETYELFDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 389 ~~~~~~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
++..+||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 321
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=332.72 Aligned_cols=219 Identities=20% Similarity=0.281 Sum_probs=179.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 478889887763100 0012459999999999999999999999999999999999987 5799999999886
Q ss_pred Cc----ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 918 NQ----ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 918 ~~----~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ...++.+||++|++. .+...||.|++.|..... .....+..+.++++++.++|.+..++. +..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHA-----PHLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCC
Confidence 43 224567999999864 233469999998865432 223344456688999999998877765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEI 1071 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1071 (1436)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 344 4999999986 7888
Q ss_pred EEcCC
Q 046196 1072 YVGPL 1076 (1436)
Q Consensus 1072 y~G~~ 1076 (1436)
..|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 98875
No 322
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=326.22 Aligned_cols=206 Identities=33% Similarity=0.497 Sum_probs=170.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35899999999999999999999999999999999999987 9999999987754322 34689999998887889
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.++....+. . . .+....++.+++.+||++..++.+
T Consensus 92 tv~e~l~~~~~~~~~-~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 132 (258)
T PRK13548 92 TVEEVVAMGRAPHGL-S---------R------------------------AEDDALVAAALAQVDLAHLAGRDY----- 132 (258)
T ss_pred CHHHHHHhhhcccCC-C---------c------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----
Confidence 999999886421110 0 0 001123456788999987666655
Q ss_pred ccCChhhhhHHHHHHHHh------cCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 324 RGISGGQRKRLTTGEMLV------GPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~------~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
..|||||||||+||+||+ .+|++++|||||+|||+.+...+.+.|+++.+. .+++|+.++|+..++.+++|+|
T Consensus 133 ~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 133 PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHE-RGLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhcCEE
Confidence 469999999999999999 599999999999999999999999999998633 3456666889998999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 323
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=330.62 Aligned_cols=206 Identities=24% Similarity=0.352 Sum_probs=170.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc----ccceEEEecCCCC-cCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV----PQRTSAYISQNDL-HIG 241 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~-~~~ 241 (1436)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999875422 2457999999963 344
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 001123567889999988777665
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 35566667888888765 99999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998753
No 324
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=326.40 Aligned_cols=209 Identities=27% Similarity=0.356 Sum_probs=173.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888877652 2358999999999999999999999999999999999876 5699999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.++|++|+..+++ .||+||+.+....+ . . ....++++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999997653221 1 1 123467889999996 444543 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999976 56778999999996 68888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8874
No 325
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4e-34 Score=326.13 Aligned_cols=206 Identities=22% Similarity=0.326 Sum_probs=171.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc----------------ccceE
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV----------------PQRTS 230 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 230 (1436)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 35999999999999999999999999999999999999987 999999998775321 13569
Q ss_pred EEecCCCCcCCCCCHHHHHHhhhhh-cCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhC
Q 046196 231 AYISQNDLHIGEMTVRETLAFSARC-QGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILG 309 (1436)
Q Consensus 231 ~yv~Q~~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 309 (1436)
+|++|++.+++.+||+||+.++... .+.. . ......++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcC
Confidence 9999999889899999999875321 0100 0 001123456788999
Q ss_pred CcccccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchh
Q 046196 310 LEVCADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPE 389 (1436)
Q Consensus 310 L~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 389 (1436)
|++..+.. ++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+. .+++++.++|+..+
T Consensus 136 l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 98766544 4569999999999999999999999999999999999999999999987653 35677778899999
Q ss_pred HHHhcccEEEecCCeEEEecChhHHH
Q 046196 390 TYELFDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 390 ~~~~~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
+.+++|++++|++|++++.|+++++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 326
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3e-34 Score=323.91 Aligned_cols=201 Identities=28% Similarity=0.417 Sum_probs=171.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc-cccceEEEeecCCCCCCCCcHH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE-TFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 359999999999999999999999999999999999876 5689999999886432 2345799999999888999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
||+.+....+. .......+.++++++.+++.+..++. .+.||+||+||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRY-----PNQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 22233345678899999998766665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1023 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
+.+...+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999998765 899999999986 56788999999986 788888875
No 327
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-34 Score=320.06 Aligned_cols=196 Identities=23% Similarity=0.331 Sum_probs=160.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999987 9999999998765332 1469999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++.+||+||+.++....... .. +....+..+++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK------------------------EAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCh-
Confidence 88999999998864321100 00 01123456788999987666544
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++ +.+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~-~~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELA-KKLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHH-hhcCEEEE
Confidence 4699999999999999999999999999999999999999999999886532 45566678887776 45899999
Q ss_pred ecCCeEE
Q 046196 400 LSDGQIV 406 (1436)
Q Consensus 400 L~~G~iv 406 (1436)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 328
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=323.02 Aligned_cols=199 Identities=29% Similarity=0.407 Sum_probs=170.7
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc-cccceEEEeecCCCCCCCCcHHHH
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE-TFARISGYCEQTDIHSPHVTVYES 944 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~ 944 (1436)
+|+|+|++|+|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999877 5789999999876431 224579999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHH
Q 046196 945 LVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1024 (1436)
Q Consensus 945 l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~ 1024 (1436)
+.+..... .....+..+.+.++++.+++.+..++. +..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRK-----PETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcC-----cccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 122333445578899999998777665 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1025 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1025 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 899999999975 46778999999986 788888874
No 329
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=333.72 Aligned_cols=205 Identities=21% Similarity=0.298 Sum_probs=169.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-------cccceEEEecCCC-C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-------VPQRTSAYISQND-L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~-~ 238 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35899999999999999999999999999999999999998 99999999887532 1134699999986 2
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
.+..+||+||+.|+....+.. . .+....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998864322110 0 00112346678999996 455554
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. .+++|+.++|+..++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999998753 3667777899999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 330
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=330.48 Aligned_cols=218 Identities=25% Similarity=0.358 Sum_probs=175.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC------ceeEEEEE
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YVSGSITI 912 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i 912 (1436)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56777776542 245999999999999999999999999999999999987632 02899999
Q ss_pred CCccCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046196 913 SGYPKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGV 988 (1436)
Q Consensus 913 ~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 988 (1436)
+|.++.. ..+++.++|++|++..++.+||+||+.+....... ......+..+.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987642 23445689999998766679999999875321110 0111123345678899999998766554 4
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhh
Q 046196 989 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAF 1058 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~---------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 1058 (1436)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++...+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999986 577789
Q ss_pred CeEEEEecCcEEEEEcCC
Q 046196 1059 DELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1059 D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|++++|++ |+++..|+.
T Consensus 223 d~i~~l~~-G~i~~~g~~ 239 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAP 239 (272)
T ss_pred CEEEEEEC-CeEEEecCH
Confidence 99999986 789998875
No 331
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=325.78 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=174.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC-CceeEEEEECCccC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYVSGSITISGYPK 917 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 917 (1436)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56777776652 23589999999999999999999999999999999998642 25789999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
.. ...++.++|++|+..+++ .|++||+.+....+... ...+...+.++++++.+++.+....... ..++.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999988887 69999998865433110 0122334457889999999532111111 124679999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999976 57788999999996 7899988
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 74
No 332
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=325.46 Aligned_cols=206 Identities=20% Similarity=0.285 Sum_probs=164.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998631 1389999999876421 1245699999998777
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE----VCADT 316 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 316 (1436)
.+||+||+.|+....+.... ......++.+++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 48999999987533211000 00012234556777763 33444
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
. ++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999999842 35666688999899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 046196 397 LILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~ 415 (1436)
|++|++|+++.+|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 333
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=332.35 Aligned_cols=205 Identities=24% Similarity=0.344 Sum_probs=171.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCC-cCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL-HIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~l 243 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999998 9999999988754322 346899999963 45578
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.++....+... ......++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987643221100 001123566889999987777655
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+.||+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999998653 3566777889999999999999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 334
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=327.91 Aligned_cols=205 Identities=27% Similarity=0.365 Sum_probs=168.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCC--c---cccceEEEecCCCC-cC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEE--F---VPQRTSAYISQNDL-HI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~~~-~~ 240 (1436)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 34899999999999999999999999999999999999998 9999999998742 1 11356999999864 34
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+..|+.||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------E------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 5678999998864322110 0 001123456788899987766554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999764 2 456777889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998764
No 335
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.3e-34 Score=323.33 Aligned_cols=212 Identities=23% Similarity=0.337 Sum_probs=172.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 35999999999999999999999999999999999999988 9999999987754332 2459999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++..... ..+....... .......++.+++.+||++..++.+
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFRL------------------------SAEEKDRIEEVLETIGLADEADRLA---- 141 (242)
T ss_pred CCHHHHHHHhhhccc--cccccccccc------------------------HHHHHHHHHHHHHHcCCchhhcCCh----
Confidence 999999988643110 0000000000 0011234567889999987766555
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.++||+|++|++
T Consensus 142 -~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 142 -GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 45999999999999999999999999999999999999999999998753 3 5666688999999999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 336
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=323.09 Aligned_cols=211 Identities=24% Similarity=0.317 Sum_probs=174.8
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++ ..|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYH-------------HL--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEEC-------------Cc--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 56778777653 11 238999999999999999999999999999999876 57899999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 919 QE-TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 919 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
.. ..++.++|++|++.+++.+|+.||+.+...... .. .+...+.++++++.+++.+..++. +..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARL-----PGQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCC-----cccCCHHHHH
Confidence 32 124568999999999999999999986532110 11 123345678999999998777765 3579999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 56788999999996 788898874
No 337
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=324.96 Aligned_cols=205 Identities=20% Similarity=0.296 Sum_probs=165.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCcc-----ccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEFV-----PQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++.... .++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 48999999999999999999999999999999999987510 12899999998874321 235699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE----VCADT 316 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 316 (1436)
+ +||+||+.|+.+..+.. .. +....++.+++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGAN----------KK------------------------DLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 89999999875332110 00 0011245567888874 23343
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
.+..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|+
T Consensus 151 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~ 222 (258)
T PRK14268 151 -----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDY 222 (258)
T ss_pred -----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999998742 35666688999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 046196 397 LILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~ 415 (1436)
|++|++|++++.|+++++.
T Consensus 223 i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988763
No 338
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-34 Score=328.10 Aligned_cols=204 Identities=21% Similarity=0.320 Sum_probs=166.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-------ccceEEEecCCCC-c
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-------PQRTSAYISQNDL-H 239 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~-~ 239 (1436)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 5899999999999999999999999999999999999997 999999998875421 1356999999862 3
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc-cccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV-CADTMV 318 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 318 (1436)
+...||+||+.|.....+.. . .+....++.+++.+||.. ..+..
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFEKN- 142 (280)
T ss_pred hccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC-
Confidence 44579999998864322110 0 001123456788899963 44544
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ .+++|+.++|+..++.+++|+++
T Consensus 143 ----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 143 ----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ--SGMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhCCEEE
Confidence 456999999999999999999999999999999999999999999998754 35566668898888999999999
Q ss_pred EecCCeEEEecChhHHH
Q 046196 399 LLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~ 415 (1436)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999998874
No 339
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=329.49 Aligned_cols=204 Identities=27% Similarity=0.363 Sum_probs=169.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-----cccceEEEecCCCC-cCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDL-HIG 241 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~-~~~ 241 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 99999999887421 11356999999962 345
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
.+||+||+.++....+. .+. +....+..+++.+||++..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL----------SKE------------------------EVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHCCCchhhcCChh--
Confidence 67999999876321110 000 011234567899999877776554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.||||||||++||++++.+|++++|||||+|||+.+..++.+.|+++.+ .+++|+.++|+..++.++||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~--~~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK--EGITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999864 35667778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 046196 402 DGQIVYQGPRENVL 415 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~ 415 (1436)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999999875
No 340
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.6e-34 Score=359.98 Aligned_cols=208 Identities=26% Similarity=0.405 Sum_probs=165.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||+++.+... ++.++||+|++.+++ .|
T Consensus 332 ~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~-~t 407 (544)
T TIGR01842 332 PTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFP-GT 407 (544)
T ss_pred cccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCccccc-cc
Confidence 5899999999999999999999999999999999999998 9999999998876543 467999999998775 59
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++||+.++.+ +.+.+++.++++..+ .+..++ .|++..||.+|+.+ .
T Consensus 408 i~~Ni~~~~~-------------------------~~~~~~~~~~~~~~~------~~~~i~--~l~~gl~t~~~~~g-~ 453 (544)
T TIGR01842 408 VAENIARFGE-------------------------NADPEKIIEAAKLAG------VHELIL--RLPDGYDTVIGPGG-A 453 (544)
T ss_pred HHHHHhccCC-------------------------CCCHHHHHHHHHHhC------hHHHHH--hCccccccccCCCc-C
Confidence 9999985421 011112222221111 112233 35667789998764 5
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++++|++|+|||||||||+.++..+.+.|+++.. ++.+++.++|+.. ..+.+|+|++|++|+
T Consensus 454 ~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~--~~~tvi~ith~~~-~~~~~d~i~~l~~G~ 530 (544)
T TIGR01842 454 TLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA--RGITVVVITHRPS-LLGCVDKILVLQDGR 530 (544)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh--CCCEEEEEeCCHH-HHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998642 2344554666654 567899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++.+
T Consensus 531 i~~~g~~~~l~~ 542 (544)
T TIGR01842 531 IARFGERDEVLA 542 (544)
T ss_pred EEeeCCHHHHhh
Confidence 999999998753
No 341
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=323.16 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=168.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCC------c---cccceEEEecCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEE------F---VPQRTSAYISQNDL 238 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~~~ 238 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999987 9999999987631 0 11346999999998
Q ss_pred cCCCCCHHHHHHhhh-hhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 239 HIGEMTVRETLAFSA-RCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
+++.+||+||+.+.. ...+.. . .+....++.+++.+||++..++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 899999999997532 111100 0 00112345678899998766655
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+ +.|||||||||+||||++.+|++++|||||+|||+.+...+.+.|+++.. .+++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998753 3566777889988999999999
Q ss_pred EEecCCeEEEecChhHH
Q 046196 398 ILLSDGQIVYQGPRENV 414 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~ 414 (1436)
++|++|+++++|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 342
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-34 Score=343.45 Aligned_cols=213 Identities=25% Similarity=0.433 Sum_probs=177.3
Q ss_pred CCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECC
Q 046196 835 EPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISG 914 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 914 (1436)
++..+..+|++|.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 345566779888764 23379999999999999999999999999999999999987 4799999999
Q ss_pred ccC---CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc------ccccC
Q 046196 915 YPK---NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIRE------ALVGL 985 (1436)
Q Consensus 915 ~~~---~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~------~~~g~ 985 (1436)
.+. +...+++.++||+|++.+++ -|++||+.++. + +.+++ .+.++++..++.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s~e----~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DASDE----EIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCCHH----HHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 44568899999999998876 59999998653 2 22222 3567777777766544 33443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
++++|||||+|||++||||+++++++++||||++||.++.+.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4678999999999999999999999999999999999999999999999876 599999999964 566789999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 6 788888864
No 343
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.5e-34 Score=321.21 Aligned_cols=202 Identities=33% Similarity=0.524 Sum_probs=163.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC---CCCCcceEEEECCccCCCccccceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG---KDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~l 243 (1436)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 569999999999999999999999999999999999998 66 999999998875433456799999999989999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHH-HHHHhCCcccccccccCcc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDY-VLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~ 322 (1436)
||+||+.|+.......... .+ ......+. .++.+++++..++.
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGNL----- 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhccc-----
Confidence 9999999875432110000 00 00011223 67888887665544
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCc-hhHHHhcccEEEec
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPA-PETYELFDDLILLS 401 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~iivL~ 401 (1436)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ . +.+++.++|+. .++.+++|++++|+
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~-~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-R-NRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 456999999999999999999999999999999999999999999998754 3 44555566665 68999999999999
Q ss_pred CCeEEEec
Q 046196 402 DGQIVYQG 409 (1436)
Q Consensus 402 ~G~iv~~G 409 (1436)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 344
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=324.70 Aligned_cols=210 Identities=22% Similarity=0.314 Sum_probs=164.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++|++++|+|||||||||||++|+|.++ |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 48999999999999999999999999999999999864 1001289999999887531 1135699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.++....+.... ......++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999987533221000 000122345677778754221122 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA---RYTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCeEEEEEecHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 356666889998999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 345
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=326.41 Aligned_cols=204 Identities=23% Similarity=0.304 Sum_probs=168.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc---ccceEEEecCCCC-cCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV---PQRTSAYISQNDL-HIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 243 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 999999998875432 2356999999974 67888
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||++|+.|.....+.. . .+....++.+++.+||.+..|+.+
T Consensus 100 ~v~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------Y------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 001123456788999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.||||||||++||||++.+|+++||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 569999999999999999999999999999999999999999999987542 34566667888777765 9999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998874
No 346
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.3e-34 Score=312.28 Aligned_cols=190 Identities=49% Similarity=0.851 Sum_probs=161.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCC--CCCceeEEEEECCc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYVSGSITISGY 915 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 915 (1436)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 477888887763110 001246999999999999999999999999999999999987 6 57999999999
Q ss_pred cCCcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046196 916 PKNQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQ 995 (1436)
Q Consensus 916 ~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGq 995 (1436)
++.....++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999998889999999997542110 499999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 996 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 996 rqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998877999999999986557788999999996 6777654
No 347
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=328.28 Aligned_cols=219 Identities=22% Similarity=0.276 Sum_probs=174.5
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEEC
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITIS 913 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 913 (1436)
..+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4588999987763 235899999999999999999999999999999999986521 468999999
Q ss_pred CccCC-----cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046196 914 GYPKN-----QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGV 988 (1436)
Q Consensus 914 g~~~~-----~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 988 (1436)
|.++. ....++.++|++|++.+++ .||+||+.+.+..+. ... ...+.++++++.+++....+.... ..+
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~-~~~ 152 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLN-ESG 152 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhC-CCc
Confidence 98753 1234567999999988887 499999988754331 111 223456778888877421111111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec--
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR-- 1066 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~-- 1066 (1436)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++
T Consensus 153 ~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~ 230 (269)
T PRK14259 153 YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEE 230 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEeccc
Confidence 67999999999999999999999999999999999999999999999854 799999999986 57889999999996
Q ss_pred ------C--cEEEEEcCC
Q 046196 1067 ------G--GEEIYVGPL 1076 (1436)
Q Consensus 1067 ------G--g~~~y~G~~ 1076 (1436)
| |+++..|+.
T Consensus 231 ~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 231 VEGGSGGKVGYLVEFNET 248 (269)
T ss_pred cccccccccceEEEeCCH
Confidence 2 678888875
No 348
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.4e-34 Score=321.67 Aligned_cols=196 Identities=21% Similarity=0.297 Sum_probs=163.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999998875432 135699999999888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 99999999988643321100 000112345788899987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.+ .+++++.++|+..++...+|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3566777899999999999999999
Q ss_pred cCCeEE
Q 046196 401 SDGQIV 406 (1436)
Q Consensus 401 ~~G~iv 406 (1436)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 349
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.3e-34 Score=342.30 Aligned_cols=194 Identities=25% Similarity=0.389 Sum_probs=168.8
Q ss_pred cceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-------ccccceEEEeecCCCCCCCCcH
Q 046196 869 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-------ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 869 ~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999987 568999999987632 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+||+.|..... ...+..+.++++++.++|.+..+.. +..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 1233345678999999998877765 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999986 57788999999996 789998875
No 350
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=321.83 Aligned_cols=200 Identities=22% Similarity=0.344 Sum_probs=166.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4899999999999999999999999999999999999987 9999999988754322 356999999987775 69
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-ccccccccCccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTMVGDEML 323 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 323 (1436)
|+||+.++....+ . ....++.+++.+||+ +..++ .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 001234568889996 34443 34
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++... .+++|+.++|+..++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 569999999999999999999999999999999999999999999987642 2456666889999999999999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 351
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-34 Score=324.65 Aligned_cols=221 Identities=21% Similarity=0.262 Sum_probs=172.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc----cceEEEecCCCCcCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 242 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 35999999999999999999999999999999999999987 9999999988764332 2348999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++....... +....... .+... ....+....++.+++.+||++..++.+
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~-------~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLK-------TPAFR---------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhcc-------ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 99999999864311000 00000000 00000 000011123556788999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999987652 255666688999999999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 352
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.6e-34 Score=327.93 Aligned_cols=224 Identities=21% Similarity=0.273 Sum_probs=178.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+..+.. ....+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3788999877631100 000012459999999999999999999999999999999999987 5799999999876
Q ss_pred Ccc---cccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCC
Q 046196 918 NQE---TFARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGL 991 (1436)
Q Consensus 918 ~~~---~~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~L 991 (1436)
... ..++.++|++|+.. +.+.+|+.|++.+...... .....+..+.++++++.+++. +..+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 421 22356899999874 5678899999987654331 122333445678899999994 444543 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 992 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 992 SgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++...+|++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999986 57778999999986 788
Q ss_pred EEEcCC
Q 046196 1071 IYVGPL 1076 (1436)
Q Consensus 1071 ~y~G~~ 1076 (1436)
+..|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888864
No 353
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=318.63 Aligned_cols=191 Identities=25% Similarity=0.394 Sum_probs=162.6
Q ss_pred cceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-------ccccceEEEeecCCCCCCCCcH
Q 046196 869 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-------ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 869 ~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999986 569999999987531 1234579999999988899999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+||+.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223345678899999998766654 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1022 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999976 46678999999996 6777654
No 354
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.1e-34 Score=318.15 Aligned_cols=198 Identities=25% Similarity=0.350 Sum_probs=167.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 35999999999999999999999999999999999999987 999999998765322 25799999999888889999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.+.....+.. ...+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 9998764321100 012345688899987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEE
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIV 406 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv 406 (1436)
|||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+.+|+.++|+..++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE--QGITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999754 3456666888888899999999999999999
Q ss_pred EecChhH
Q 046196 407 YQGPREN 413 (1436)
Q Consensus 407 ~~G~~~~ 413 (1436)
+.|++.+
T Consensus 204 ~~~~~~~ 210 (223)
T TIGR03740 204 YQGKINK 210 (223)
T ss_pred EecChhh
Confidence 9998653
No 355
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=325.51 Aligned_cols=219 Identities=21% Similarity=0.268 Sum_probs=175.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC--C-ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 914 (1436)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999887652 23589999999999999999999999999999999998652 1 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.+||++|+..+++. ||+||+.+...... ....++..+.++++++.+++.+....... ..+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 2335679999999888875 99999987643321 11223334557788999888542111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9998875
No 356
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=316.44 Aligned_cols=199 Identities=25% Similarity=0.315 Sum_probs=181.2
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---c---c-ccceEEEeecCCCCCCC
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---E---T-FARISGYCEQTDIHSPH 938 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~-~~~~~gyv~q~~~~~~~ 938 (1436)
-++|+|++++.||++.|||-||||||||+++|.++.+ |+.|+|+++|.++.. . . .++.+++|+|...++|+
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPh 120 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPH 120 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccc
Confidence 5899999999999999999999999999999999887 679999999998642 1 2 24568999999999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 939 VTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
.||.||..|+..++ .++.+++++++.+.++.+||....+.. +.+||||+||||.|||||+.+|+||+||||+
T Consensus 121 rtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDEaF 192 (386)
T COG4175 121 RTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDEAF 192 (386)
T ss_pred hhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecCch
Confidence 99999999998776 567888999999999999999999887 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|.|||--+..+++-|.++.++ ++|||++|||.+ +.+.+-|||.+|+ +|+++..|.+
T Consensus 193 SALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp 249 (386)
T COG4175 193 SALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTP 249 (386)
T ss_pred hhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCH
Confidence 999999999999999998655 899999999997 7889999999998 5899999975
No 357
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-34 Score=324.42 Aligned_cols=219 Identities=26% Similarity=0.307 Sum_probs=173.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--CC-ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478889887652 2358999999999999999999999999999999999743 21 2489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ..+++.++|++|+..+++ .||+||+.+....+. ....+...+.++++++.+++.+....... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLH-DSAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcc
Confidence 87632 123567999999988777 899999987653321 11122334557788888887531111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 689999999976 57788999999996 68
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 8888874
No 358
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=335.42 Aligned_cols=226 Identities=16% Similarity=0.210 Sum_probs=178.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC--CceeEEEEECCc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYVSGSITISGY 915 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~ 915 (1436)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 36788887766321 1234699999999999999999999999999999999998752 246899999998
Q ss_pred cCCc---cc----ccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCcccccccc
Q 046196 916 PKNQ---ET----FARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPE---VDSDTRKMFVEEVMELVELNPIREALV 983 (1436)
Q Consensus 916 ~~~~---~~----~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~---~~~~~~~~~v~~vl~~l~l~~~~~~~~ 983 (1436)
++.. .. .++.++|++|++. +.|.+||.+++........... ....+..+.+.++++.++|.+..+...
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 7642 11 1246999999875 6788999999975422110000 111234456889999999975332111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEE
Q 046196 984 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELL 1062 (1436)
Q Consensus 984 g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1062 (1436)
..+.+|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|+++
T Consensus 154 --~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~ 230 (330)
T PRK15093 154 --SFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKIN 230 (330)
T ss_pred --CCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEE
Confidence 124689999999999999999999999999999999999999999999999874 899999999976 5668899999
Q ss_pred EEecCcEEEEEcCC
Q 046196 1063 LMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1063 ~l~~Gg~~~y~G~~ 1076 (1436)
+|.+ |+++..|+.
T Consensus 231 vm~~-G~ive~g~~ 243 (330)
T PRK15093 231 VLYC-GQTVETAPS 243 (330)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 799999974
No 359
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-32 Score=357.41 Aligned_cols=209 Identities=29% Similarity=0.372 Sum_probs=175.5
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++|+++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999998741 22469999999999999999999999999999999999987 579999999998
Q ss_pred CC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+. ...+++.+|||+|++.+++ -|++||+.+.. | .+.+ .+.++++..++.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~e----~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTLD----EAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCHH----HHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 3457788999999998875 59999998642 2 2222 25667777776643 24555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999886 589999999975 5678999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 799999985
No 360
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.52 Aligned_cols=212 Identities=23% Similarity=0.290 Sum_probs=168.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCcc---ccceEEEecCCCCcCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEFV---PQRTSAYISQNDLHIGE 242 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~ 242 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 5899999999999999999999999999999999998741 113899999998875432 23579999999888899
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++.+..+.... . .+....++.+++.+||.+..+... +..
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------K------------------------KELQERVRWALEKAQLWDEVKDRL-DAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------H------------------------HHHHHHHHHHHHHcCCCcchhhhh-cCC
Confidence 9999999987532210000 0 001123456788888864211111 233
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+.+|+|++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998742 45667788988888999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+++++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999998774
No 361
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.5e-34 Score=321.12 Aligned_cols=201 Identities=23% Similarity=0.298 Sum_probs=166.3
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC--ceeEEEEECCccCCcccc-cceEEEeecCCC--CCCCCc
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YVSGSITISGYPKNQETF-ARISGYCEQTDI--HSPHVT 940 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~q~~~--~~~~lT 940 (1436)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|+.. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 589999999999999999999999999999999987631 168999999988654322 357899999974 557789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP---IREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1017 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~---~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEP 1017 (1436)
+.|++.+...... ...+...+.++++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 112333456789999999973 34443 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1018 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1018 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 57778999999986 788888874
No 362
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.5e-34 Score=321.07 Aligned_cols=201 Identities=25% Similarity=0.332 Sum_probs=162.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc------ccceEEEecCCC--Cc
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV------PQRTSAYISQND--LH 239 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~--~~ 239 (1436)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999987 999999999876533 235799999997 45
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTMV 318 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 318 (1436)
++.+||+||+.+.....+.... + + ......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~----------~-----------~-----------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK----------K-----------E-----------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH----------H-----------H-----------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999886432211000 0 0 0001123567888885 4445443
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEE
Confidence 469999999999999999999999999999999999999999999998652 24566668888888888999999
Q ss_pred EecCCeEEEec
Q 046196 399 LLSDGQIVYQG 409 (1436)
Q Consensus 399 vL~~G~iv~~G 409 (1436)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 363
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=323.94 Aligned_cols=218 Identities=21% Similarity=0.272 Sum_probs=175.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888877652 235899999999999999999999999999999999986531 2689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGV 988 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~ 988 (1436)
.++.. ...++.++|++|++.+++ .|++||+.|....... ...++..+.++++++.+++.+ +.+.. . ..+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~ 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDL-K-KSA 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCc
Confidence 87632 123566999999988887 8999999876543211 122334456788899998742 11111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |
T Consensus 146 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G 222 (251)
T PRK14270 146 LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-G 222 (251)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999876 689999999976 57788999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 223 ~i~~~~~~ 230 (251)
T PRK14270 223 DLIEFNKT 230 (251)
T ss_pred eEEEeCCH
Confidence 88898875
No 364
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=327.27 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=169.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc---ccceEEEecCCCC-cCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV---PQRTSAYISQNDL-HIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 243 (1436)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4899999999999999999999999999999999999887222399999999875432 2356999999974 67789
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.|+.+..+.. . .+....++.+++.+||++..++.+
T Consensus 101 tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------R------------------------PEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998864322110 0 001123566789999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++ ..||++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999988653 355666678888777 589999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 365
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=323.28 Aligned_cols=219 Identities=23% Similarity=0.307 Sum_probs=174.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888877652 235899999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|+..+++ .|++||+.+....+.. ...++..+.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKK-SAL 145 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhc-CCC
Confidence 87642 124567999999988777 8999999886543211 12233445678888888874211111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14240 146 GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFLN-GE 222 (250)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999854 799999999975 57788999999996 68
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 223 i~~~~~~ 229 (250)
T PRK14240 223 IVEFGDT 229 (250)
T ss_pred EEEeCCH
Confidence 8888864
No 366
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-35 Score=338.97 Aligned_cols=212 Identities=27% Similarity=0.424 Sum_probs=174.1
Q ss_pred CCceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECC
Q 046196 835 EPHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISG 914 (1436)
Q Consensus 835 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 914 (1436)
.+..|+|+|+.+++. +++++|+++||+|++||.+||+|+|||||||++|+|.+... .+|+|+|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999998874 23459999999999999999999999999999999999875 589999999
Q ss_pred ccCC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------cccccccc
Q 046196 915 YPKN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-------PIREALVG 984 (1436)
Q Consensus 915 ~~~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-------~~~~~~~g 984 (1436)
++++ .+.+|+.+|||||+..++ +-||.+|+.|+. ...+.++ |-++.+..++. +-..+.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHh
Confidence 9864 356788999999987776 569999999864 1233322 33444444443 33445566
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 985 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 985 ~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
.. +..|||||||||+||||+++||+|+++|||||.||+.+...+++.+++. ..|+|+|++.|+. +....||+|++|
T Consensus 483 er-G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ER-GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hc-ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 54 3569999999999999999999999999999999999999999999984 4589999999995 578899999999
Q ss_pred ecCcEEEEEcCC
Q 046196 1065 KRGGEEIYVGPL 1076 (1436)
Q Consensus 1065 ~~Gg~~~y~G~~ 1076 (1436)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 97 678888875
No 367
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=324.23 Aligned_cols=207 Identities=21% Similarity=0.269 Sum_probs=166.6
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC--C-ceeEEEEECCccCCc-----ccccceEEEeecCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YVSGSITISGYPKNQ-----ETFARISGYCEQTDIH 935 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~~ 935 (1436)
+.+|+|+||+|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 4589999999999999999999999999999999998642 1 368999999987532 1245679999999888
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 046196 936 SPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1015 (1436)
Q Consensus 936 ~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlD 1015 (1436)
++. |++||+.+....+. .....+...+.++++++.+++.+........ .+..||||||||++|||+|+.+|++|+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 775 99999987643321 1112223345578889999986521111111 24679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999976 56778999999996 688888874
No 368
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=339.34 Aligned_cols=195 Identities=24% Similarity=0.378 Sum_probs=168.9
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-------cccceEEEecCCCCcCCCCC
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-------VPQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 244 (1436)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886431 12467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998863200 0112456788999987776554 5
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998653 25566778999999999999999999999
Q ss_pred EEEecChhHHH
Q 046196 405 IVYQGPRENVL 415 (1436)
Q Consensus 405 iv~~G~~~~~~ 415 (1436)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999885
No 369
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=317.61 Aligned_cols=206 Identities=27% Similarity=0.367 Sum_probs=172.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCH
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTV 245 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1436)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|+++.+... ++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 35999999999999999999999999999999999999997 8999999998764332 3579999999988889999
Q ss_pred HHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 046196 246 RETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRG 325 (1436)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 325 (1436)
+||+.++....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999988644321100 001123456788999987776554 46
Q ss_pred CChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeE
Q 046196 326 ISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQI 405 (1436)
Q Consensus 326 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~i 405 (1436)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.... +.+|+.++|+..++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876522 45666678888889999999999999999
Q ss_pred EEecChhHHH
Q 046196 406 VYQGPRENVL 415 (1436)
Q Consensus 406 v~~G~~~~~~ 415 (1436)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887764
No 370
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=340.68 Aligned_cols=190 Identities=24% Similarity=0.387 Sum_probs=166.8
Q ss_pred cceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-------ccccceEEEeecCCCCCCCCcH
Q 046196 869 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-------ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 869 ~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..++|++||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999987 569999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+||+.|... ....+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 11234578999999998877765 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999986 67889999999996 789998875
No 371
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=323.04 Aligned_cols=219 Identities=25% Similarity=0.329 Sum_probs=174.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 367888877652 235899999999999999999999999999999999986531 2689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....+...+.+++.++.+++.+..+.... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGT 145 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChh
Confidence 87642 123567999999988877 899999987653321 11222334456788888888542111111 1256
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~ 222 (250)
T PRK14262 146 RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GE 222 (250)
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999976 57788999999996 68
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14262 223 LIEYGPT 229 (250)
T ss_pred EEEecCH
Confidence 8888874
No 372
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.1e-34 Score=370.11 Aligned_cols=207 Identities=29% Similarity=0.450 Sum_probs=168.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
.+|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.++ +.|
T Consensus 471 ~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf-~~t 546 (694)
T TIGR01846 471 EVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLF-SRS 546 (694)
T ss_pred cccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCeeh-hhh
Confidence 4899999999999999999999999999999999999998 9999999999887654 46799999998855 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++.. +.+.+++.+++...+.++ . .-.|++..||.+|+.+ .
T Consensus 547 i~eNi~~~~~-------------------------~~~~~~i~~a~~~~~l~~------~--i~~lp~gl~t~i~~~g-~ 592 (694)
T TIGR01846 547 IRDNIALCNP-------------------------GAPFEHVIHAAKLAGAHD------F--ISELPQGYNTEVGEKG-A 592 (694)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHcChHH------H--HHhCcCccCcEecCCC-C
Confidence 9999987521 112223333333222211 1 2236778899999765 5
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++.+|++|+||||||+||+.++..+.+.|++.. .+.+++.++|..+ ....+|+|++|++|+
T Consensus 593 ~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~---~~~t~i~itH~~~-~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 593 NLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC---RGRTVIIIAHRLS-TVRACDRIIVLEKGQ 668 (694)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh---CCCEEEEEeCChH-HHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999863 2345555666654 556799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++++|+++++++
T Consensus 669 i~~~g~~~~l~~ 680 (694)
T TIGR01846 669 IAESGRHEELLA 680 (694)
T ss_pred EEEeCCHHHHHH
Confidence 999999999865
No 373
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.48 Aligned_cols=212 Identities=21% Similarity=0.310 Sum_probs=167.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCC--cc---ccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEE--FV---PQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. .. .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4899999999999999999999999999999999998762 1138999999998752 11 235699999999889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++....+..... . .....++.+++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------K------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------H------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 8999999998865322110000 0 00112355677888743211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+..++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999999753 3 56666889988999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 374
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=6.2e-34 Score=363.12 Aligned_cols=207 Identities=22% Similarity=0.338 Sum_probs=167.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 4899999999999999999999999999999999999998 9999999999887654 36799999999866 569
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++.. +.+.+++.+++...+.+ ..+ -.|++..||.+|+.+ +
T Consensus 425 i~~Ni~~~~~-------------------------~~~d~~i~~al~~~~l~------~~i--~~lp~gldt~i~~~g-~ 470 (588)
T PRK13657 425 IEDNIRVGRP-------------------------DATDEEMRAAAERAQAH------DFI--ERKPDGYDTVVGERG-R 470 (588)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCHH------HHH--HhCcccccchhcCCC-C
Confidence 9999988621 11112222222221111 111 236778899998864 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.||||||||++||||++++|+|++||||||+||+.++..+.+.|++.. .+ .++++++|+. +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~--~~-~tvIiitHr~-~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM--KG-RTTFIIAHRL-STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--cC-CEEEEEEecH-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998763 23 4455466665 5678899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++.+|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 375
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=327.36 Aligned_cols=216 Identities=22% Similarity=0.297 Sum_probs=179.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++. ..+..+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4788898877631 012358999999999999999999999999999999999987 5799999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDI-HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.+++.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999964 567789999998764322 123333445678999999998776654 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 8999999999763 4 46999999996 68888
Q ss_pred EcCC
Q 046196 1073 VGPL 1076 (1436)
Q Consensus 1073 ~G~~ 1076 (1436)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8874
No 376
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-34 Score=325.90 Aligned_cols=209 Identities=25% Similarity=0.375 Sum_probs=170.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 5999999999999999999999999999999999999987 9999999987754322 346999999988888999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|.||+.++..... .. . + .. . ......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~~-~~-~-------------~-~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPWH-GA-L-------------G-RF-G-------------AADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCccccc-cc-c-------------c-CC-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 9999987532100 00 0 0 00 0 0011234567889999876666554
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+||+.+|++|||||||+|||..++..+.+.|++++.. .+++|+.++|+.+++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 59999999999999999999999999999999999999999999998643 24566768899999999999999999999
Q ss_pred EEEecChhHHH
Q 046196 405 IVYQGPRENVL 415 (1436)
Q Consensus 405 iv~~G~~~~~~ 415 (1436)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999987763
No 377
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.5e-34 Score=325.55 Aligned_cols=207 Identities=25% Similarity=0.322 Sum_probs=170.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc------cceEEEecCCC--C
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP------QRTSAYISQND--L 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~~--~ 238 (1436)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999987 9999999988764322 34699999996 4
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
+.+.+||+||+.+...... .... ......++.+++.+||+ +..+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~---------~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT---------SLDE------------------------SEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc---------CCCH------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 5678999999987532110 0000 00112345678899996 455544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+ +.|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++.+. .+++|+.++|+...+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcEE
Confidence 4 469999999999999999999999999999999999999999999998653 3566777889999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+++++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999998874
No 378
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.9e-34 Score=319.61 Aligned_cols=204 Identities=23% Similarity=0.291 Sum_probs=167.3
Q ss_pred eeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC----CCCcceEEEECCccCCCccc-cceEEEecCCCC--cCC
Q 046196 169 ILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK----DLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDL--HIG 241 (1436)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~ 241 (1436)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 58999999999999999999999999999999999988 6 8999999998765432 247999999974 456
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc---cccccc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV---CADTMV 318 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~v 318 (1436)
.+|+.|++.+.....+.. . ......++.+++.+||++ ..+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 120 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLK--- 120 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHh---
Confidence 789999998754321100 0 001123466788999974 334
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
+.+..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.+. .+++|+.++|+.+++..++|+|+
T Consensus 121 --~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 121 --KYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred --CChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 334569999999999999999999999999999999999999999999987642 35566668899889999999999
Q ss_pred EecCCeEEEecChhHHH
Q 046196 399 LLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~ 415 (1436)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988874
No 379
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-33 Score=320.75 Aligned_cols=213 Identities=23% Similarity=0.275 Sum_probs=169.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCcceEEEECCccCCCccc----cceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKL--GKDLKFSGRVTYNGHGMEEFVP----QRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 240 (1436)
.++|+|+|++|++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 35999999999999999999999999999999999995 566 8999999988754332 23489999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc-ccccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV-CADTMVG 319 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 319 (1436)
+.+||+|++.+..+....... . ...+ ..+....++.+++.+||++ ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~----------~------~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG----------E------EPLD-----------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc----------c------cccc-----------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999886432110000 0 0000 0011123567889999973 4554432
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHh-cccEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYEL-FDDLI 398 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~D~ii 398 (1436)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999854 345666688888888888 89999
Q ss_pred EecCCeEEEecChhHHH
Q 046196 399 LLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~ 415 (1436)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 380
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=322.48 Aligned_cols=219 Identities=23% Similarity=0.263 Sum_probs=174.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888876652 245899999999999999999999999999999999987632 3589999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046196 915 YPKNQ----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSG 990 (1436)
Q Consensus 915 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~ 990 (1436)
.++.. ...++.++|++|++.+++ .||.||+.+...... ....+...+.+++.++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87631 234567999999988887 899999987643221 111223345567788888875321111111 2467
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999986 57788999999996 789
Q ss_pred EEEcCC
Q 046196 1071 IYVGPL 1076 (1436)
Q Consensus 1071 ~y~G~~ 1076 (1436)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 888874
No 381
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-33 Score=323.21 Aligned_cols=208 Identities=29% Similarity=0.406 Sum_probs=170.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 35999999999999999999999999999999999999987 9999999988765432 24689999998778889
Q ss_pred CHHHHHHhhhh-hcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 244 TVRETLAFSAR-CQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 244 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
||+||+.++.. ... .. . .+ ..+....++.+++.+||.+..++.+
T Consensus 91 tv~e~l~~~~~~~~~----------~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (256)
T TIGR03873 91 TVRDVVALGRIPHRS----------LW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM---- 135 (256)
T ss_pred CHHHHHHhcchhhhh----------hc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 99999988521 000 00 0 00 0001123456788899977666555
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+++|+.++|+..++.+++|+|++|++
T Consensus 136 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 136 -STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 45999999999999999999999999999999999999999999998753 356677788999999999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|+++..|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999988763
No 382
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=332.49 Aligned_cols=218 Identities=17% Similarity=0.174 Sum_probs=171.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CcceEEEECCccCCCccc-------cceEEEecCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL-KFSGRVTYNGHGMEEFVP-------QRTSAYISQNDL 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~ 238 (1436)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... .+.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 469999999999999999999999999999999999986411 138999999998765432 136999999975
Q ss_pred --cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccc
Q 046196 239 --HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADT 316 (1436)
Q Consensus 239 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 316 (1436)
+.+.+||.+++.+.......... . ... ..+....+..+|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~------~---------~~~-------------~~~~~~~~~~~L~~~gL~~~~~- 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGR------W---------WQR-------------FGWRKRRAIELLHRVGIKDHKD- 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccc------c---------ccc-------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 57889999999764221000000 0 000 0001123566899999975321
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhccc
Q 046196 317 MVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDD 396 (1436)
Q Consensus 317 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 396 (1436)
+-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 151 -~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~dr 228 (330)
T PRK15093 151 -AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWADK 228 (330)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCE
Confidence 113455679999999999999999999999999999999999999999999998653 356777799999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 046196 397 LILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 397 iivL~~G~iv~~G~~~~~~ 415 (1436)
|++|++|+|++.|+.+++.
T Consensus 229 i~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 229 INVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998874
No 383
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.28 Aligned_cols=220 Identities=22% Similarity=0.270 Sum_probs=176.5
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC---CceeEEEEEC
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYVSGSITIS 913 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 913 (1436)
..++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3588999988763 23589999999999999999999999999999999998652 1368999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046196 914 GYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGV 988 (1436)
Q Consensus 914 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 988 (1436)
|.++.. ...++.++|++|+..+++. |++||+.+...... ....+..++.++++++.+++.+......+ ..+
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-ENA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CCc
Confidence 987642 1345679999999888875 99999987654321 11222233457888888888532111111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 789999999976 57788999999996 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 88888874
No 384
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=356.37 Aligned_cols=218 Identities=25% Similarity=0.338 Sum_probs=182.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+||+|++||++||+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 377888887652 2459999999999999999999999999999999999987 5689999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 918 NQE----TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 918 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
... ..++.++|++|++.+++.+||+|++.+....... ...+.++.++.++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCC
Confidence 321 1235689999999899999999999876432111 11223334456789999999988777653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|+++ ++...+|++++|++ |+++.
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIA 221 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999996 78888
Q ss_pred EcCCC
Q 046196 1073 VGPLG 1077 (1436)
Q Consensus 1073 ~G~~~ 1077 (1436)
.|+..
T Consensus 222 ~~~~~ 226 (501)
T PRK10762 222 EREVA 226 (501)
T ss_pred ecCcC
Confidence 88864
No 385
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=323.22 Aligned_cols=209 Identities=27% Similarity=0.395 Sum_probs=170.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 35999999999999999999999999999999999999887 9999999987654322 34699999998888889
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||.||+.++..-.. ..+. .. + ......++.+++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~~---~~----------~---------------~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG---RL----------S---------------AEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhcc---CC----------C---------------HHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988631000 0000 00 0 001123456788899987666654
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. .+++++.++|+..++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3556777889999999999999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999988763
No 386
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-34 Score=324.20 Aligned_cols=216 Identities=23% Similarity=0.309 Sum_probs=176.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC-c--eeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--VSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478889887653 235899999999999999999999999999999999987632 2 489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|++.+++ .||+||+.+....+. ..+..+..+.++++++.+++.+ ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 146 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNK---- 146 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcC----
Confidence 87632 223457999999988887 899999987654331 1122333455778888888842 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
.+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 147 -~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 147 -SALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 2568999999999999999999999999999999999999999999999865 699999999986 5788999999998
Q ss_pred c----CcEEEEEcCC
Q 046196 1066 R----GGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~----Gg~~~y~G~~ 1076 (1436)
. .|+++..|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999975
No 387
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=331.54 Aligned_cols=221 Identities=19% Similarity=0.235 Sum_probs=177.8
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC---CceeEEEEEC
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYVSGSITIS 913 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 913 (1436)
..++++|+++.+.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46899999887631 123589999999999999999999999999999999998642 2468999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHHHcCCcccccccccCCC
Q 046196 914 GYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVD-SDTRKMFVEEVMELVELNPIREALVGLPG 987 (1436)
Q Consensus 914 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~-~~~~~~~v~~vl~~l~l~~~~~~~~g~~~ 987 (1436)
|.++.. ..+++.++|++|++.+++ .|++||+.|..... ... .+...+.++++++.++|.+-.+..++. .
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~ 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-A 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-C
Confidence 998742 234567999999988774 79999999864322 112 222234467788888875322233332 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|+|++|++
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 568999999999999999999999999999999999999999999999875 699999999976 46677999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|..
T Consensus 300 G~i~e~g~~ 308 (329)
T PRK14257 300 GWIEEAGET 308 (329)
T ss_pred CEEEEeCCH
Confidence 799999875
No 388
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.80 Aligned_cols=221 Identities=23% Similarity=0.272 Sum_probs=177.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. +..+|+|+||++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999987763 235899999999999999999999999999999999987632 1479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|+..+++ .|++||+.+....... .+..+..+.++++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 233567999999988887 8999999876433211 12223345678889999885422111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecC-
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRG- 1067 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G- 1067 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 8999999999999999999999999999999999999999999999865 4899999999986 578899999999964
Q ss_pred ---cEEEEEcCC
Q 046196 1068 ---GEEIYVGPL 1076 (1436)
Q Consensus 1068 ---g~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 789999885
No 389
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.5e-33 Score=316.69 Aligned_cols=197 Identities=25% Similarity=0.335 Sum_probs=162.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999988 9999999988765432 24699999999888
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++....+.. . .+....++.+++.+||++..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES----------S------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 9999999998864322100 0 001123456788999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986432 45666678887776 569999999
Q ss_pred cCCeEEEe
Q 046196 401 SDGQIVYQ 408 (1436)
Q Consensus 401 ~~G~iv~~ 408 (1436)
++|+++++
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 390
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.3e-34 Score=317.27 Aligned_cols=209 Identities=24% Similarity=0.363 Sum_probs=173.4
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+.. ..+.+.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 567777765421 0112569999999999999999999999999999999999876 57999999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046196 919 QE------TFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LS 992 (1436)
.. ..++.++|++|++.+++++|+.||+.+...... ....++..+.++++++.+++.+..+.. ++.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 21 235679999999988899999999998654321 123344455688999999998766665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+|
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~g 217 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999876 4899999999975 46789999999864
No 391
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.40 Aligned_cols=216 Identities=24% Similarity=0.343 Sum_probs=172.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc--------ccceEEEecCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV--------PQRTSAYISQNDL 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~~~ 238 (1436)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999999875223699999998774321 1346899999998
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
+++.+||+||+.++..... . ..... .... ..+....++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTC--FSWF---------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhh--cccc---------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987632100 0 00000 0000 0011224567889999987766555
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+. ++++|+.++|+..++.+++|+|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 459999999999999999999999999999999999999999999998653 35677778899989999999999
Q ss_pred EecCCeEEEecChhHH
Q 046196 399 LLSDGQIVYQGPRENV 414 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~ 414 (1436)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 392
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.8e-34 Score=317.48 Aligned_cols=193 Identities=27% Similarity=0.349 Sum_probs=159.8
Q ss_pred CccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCc
Q 046196 861 DDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 861 ~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lT 940 (1436)
++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+|
T Consensus 32 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~t 100 (224)
T cd03220 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELT 100 (224)
T ss_pred cCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCc
Confidence 345679999999999999999999999999999999999876 579999999976421 111233457799
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1020 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsg 1020 (1436)
|+||+.+...... ....+..+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+|
T Consensus 101 v~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEP~~g 172 (224)
T cd03220 101 GRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLP-----VKTYSSGMKARLAFAIATALEPDILLIDEVLAV 172 (224)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987654321 22333445678889999998777665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 1021 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 1021 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |++++.|
T Consensus 173 LD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 173 GDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999998777899999999975 56678999999986 6777654
No 393
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-35 Score=327.41 Aligned_cols=209 Identities=25% Similarity=0.376 Sum_probs=175.5
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCC
Q 046196 166 PLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGE 242 (1436)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~ 242 (1436)
.+++|+++|+++++|++++++||+|+||||++++|-.+++++ +|.|+++|+++.+... ++.+|.|||+..+| +
T Consensus 275 ~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDtvLF-N 350 (497)
T COG5265 275 RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLF-N 350 (497)
T ss_pred cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccceeh-h
Confidence 356999999999999999999999999999999999999998 9999999999876543 46799999998865 5
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
.|...|+.|+. |+...+++.+++........ +-.||+++||.||+++
T Consensus 351 Dti~yni~ygr-------------------------~~at~eev~aaa~~aqi~~f--------i~~lP~gy~t~Vgerg 397 (497)
T COG5265 351 DTIAYNIKYGR-------------------------PDATAEEVGAAAEAAQIHDF--------IQSLPEGYDTGVGERG 397 (497)
T ss_pred hhHHHHHhccC-------------------------ccccHHHHHHHHHHhhhhHH--------HHhCchhhhcccchhe
Confidence 69999999873 23333344444333322222 2348999999999998
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
.+ |||||||||+|||+++.+|+||+|||.||+||++|..+|...|++.. .++|+++. .|+..+.--+|.|+||++
T Consensus 398 lk-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvi--ahrlsti~~adeiivl~~ 472 (497)
T COG5265 398 LK-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVI--AHRLSTIIDADEIIVLDN 472 (497)
T ss_pred ee-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEE--eehhhhccCCceEEEeeC
Confidence 86 99999999999999999999999999999999999999999999976 36777763 334567778999999999
Q ss_pred CeEEEecChhHHHH
Q 046196 403 GQIVYQGPRENVLE 416 (1436)
Q Consensus 403 G~iv~~G~~~~~~~ 416 (1436)
|+|++.|++++++.
T Consensus 473 g~i~erg~h~~ll~ 486 (497)
T COG5265 473 GRIVERGTHEELLA 486 (497)
T ss_pred CEEEecCcHHHHHH
Confidence 99999999999986
No 394
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=324.10 Aligned_cols=209 Identities=25% Similarity=0.363 Sum_probs=171.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999988754322 24699999999888899
Q ss_pred CHHHHHHhhhhhc-CCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 244 TVRETLAFSARCQ-GVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 244 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
||+||+.++..-. ..... .+ ......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~~~~~~----------------~~---------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTR----------------WR---------------KEDEEAVTKAMQATGITHLADQSV---- 141 (265)
T ss_pred cHHHHHHhCcccccccccC----------------CC---------------HHHHHHHHHHHHHcCCHHHhcCCc----
Confidence 9999998752100 00000 00 001123456788999987666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 142 -DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred -ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 569999999999999999999999999999999999999999999998642 255667788999999999999999999
Q ss_pred CeEEEecChhHHH
Q 046196 403 GQIVYQGPRENVL 415 (1436)
Q Consensus 403 G~iv~~G~~~~~~ 415 (1436)
|++++.|+++++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 395
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6e-34 Score=319.86 Aligned_cols=202 Identities=26% Similarity=0.328 Sum_probs=166.1
Q ss_pred eecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCCCCHHHHH
Q 046196 170 LHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGEMTVRETL 249 (1436)
Q Consensus 170 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l 249 (1436)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999999987 9999999988765332 348999999888999999999
Q ss_pred HhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChh
Q 046196 250 AFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGG 329 (1436)
Q Consensus 250 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 329 (1436)
.++..... .. ... .+....++.+++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~-~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVL-PD-------LSK------------------------SERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcc-cC-------CCH------------------------HHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 88632100 00 000 001123456788999987766655 459999
Q ss_pred hhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEec
Q 046196 330 QRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQG 409 (1436)
Q Consensus 330 qkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G 409 (1436)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|+.++|+..++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999987653 3456666889999999999999999999999988
Q ss_pred ChhHH
Q 046196 410 PRENV 414 (1436)
Q Consensus 410 ~~~~~ 414 (1436)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 396
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.8e-34 Score=315.93 Aligned_cols=202 Identities=23% Similarity=0.297 Sum_probs=171.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478899887652 2358999999999999999999999999999999999887 5689999999876
Q ss_pred CcccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046196 918 NQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRK 997 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrq 997 (1436)
.....++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.+++.+..+.. +..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTL-----VRQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCC-----hhhCCHHHHH
Confidence 543344568999999888888999999987654321 11 123467889999998766665 3579999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 998 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 998 Rl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
|++||++++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999986 68889999999863
No 397
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=321.69 Aligned_cols=216 Identities=25% Similarity=0.299 Sum_probs=174.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCc---eeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---VSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 914 (1436)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788877652 2359999999999999999999999999999999999876432 479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1335579999999999999999999987643221 1122333445667777776542 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999986 5777899999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 688888874
No 398
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.38 Aligned_cols=215 Identities=24% Similarity=0.284 Sum_probs=174.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc-
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP- 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 916 (1436)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478899887653 2358999999999999999999999999999999999886 568999999987
Q ss_pred ----CCcc---c----ccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 046196 917 ----KNQE---T----FARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREAL 982 (1436)
Q Consensus 917 ----~~~~---~----~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~ 982 (1436)
+... . .++.++|++|+.. +.+.+|+.|++.+..... . .....+....++++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAV-G-ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999873 567789999987643211 1 1112233456788999999963 44443
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeE
Q 046196 983 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDEL 1061 (1436)
Q Consensus 983 ~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1061 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+...+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4679999999999999999999999999999999999999999999998765 899999999976 466789999
Q ss_pred EEEecCcEEEEEcCC
Q 046196 1062 LLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1062 ~~l~~Gg~~~y~G~~ 1076 (1436)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 789998874
No 399
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=6.8e-34 Score=362.52 Aligned_cols=208 Identities=25% Similarity=0.398 Sum_probs=167.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|+++++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+| +.|
T Consensus 346 ~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~T 421 (571)
T TIGR02203 346 PALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLF-NDT 421 (571)
T ss_pred ccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCcccc-ccc
Confidence 5899999999999999999999999999999999999998 9999999998876653 35799999999755 669
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++..- +.+.+++.+++...+.+ +.+ -.|++..||.||+.+ +
T Consensus 422 i~~Ni~~~~~~------------------------~~~~~~i~~~l~~~~l~------~~i--~~lp~gldt~i~~~g-~ 468 (571)
T TIGR02203 422 IANNIAYGRTE------------------------QADRAEIERALAAAYAQ------DFV--DKLPLGLDTPIGENG-V 468 (571)
T ss_pred HHHHHhcCCCC------------------------CCCHHHHHHHHHHcChH------HHH--HhCcCcccceecCCC-C
Confidence 99999876310 11122232322221111 111 236778899999874 5
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.||||||||++||||++.+|+|++||||||+||..++..|.+.|++.. .++ ++|.++|+. +..+.||+|++|++|+
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~-tiIiitH~~-~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGR-TTLVIAHRL-STIEKADRIVVMDDGR 544 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCC-EEEEEehhh-HHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999863 234 444466654 6678999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++..|+++++.+
T Consensus 545 i~~~g~~~~l~~ 556 (571)
T TIGR02203 545 IVERGTHNELLA 556 (571)
T ss_pred EEeeCCHHHHHH
Confidence 999999999864
No 400
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.42 Aligned_cols=213 Identities=21% Similarity=0.266 Sum_probs=173.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC--ceeEEEEECCc
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YVSGSITISGY 915 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~ 915 (1436)
.++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578889887651 24899999999999999999999999999999999997631 17899999998
Q ss_pred cCCcccc-cceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---ccccccCCCCC
Q 046196 916 PKNQETF-ARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI---REALVGLPGVS 989 (1436)
Q Consensus 916 ~~~~~~~-~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~---~~~~~g~~~~~ 989 (1436)
++..... ++.++|++|++. +.+..|+.+++.+.+.... ... ..+.++++++.+++.+. .+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 8753322 356999999974 4567899999876443221 111 12457889999999762 3333 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999976 46778999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
+++..|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 89888874
No 401
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.8e-34 Score=336.99 Aligned_cols=200 Identities=26% Similarity=0.441 Sum_probs=170.0
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-------ccceEEEecCCCCcCCCCC
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-------PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~lT 244 (1436)
|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999998 999999998875321 2356999999999999999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.|+.+... .. +....++.+++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~------------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------PS------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC------------hh------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998743110 00 01123466789999987777554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999986532 4566668899999999999999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
+++.|+++++..
T Consensus 210 i~~~g~~~~~~~ 221 (354)
T TIGR02142 210 VAAAGPIAEVWA 221 (354)
T ss_pred EEEECCHHHHhc
Confidence 999999988753
No 402
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.2e-34 Score=359.31 Aligned_cols=207 Identities=25% Similarity=0.341 Sum_probs=166.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|++.++. .|
T Consensus 329 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~t 404 (569)
T PRK10789 329 PALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS-DT 404 (569)
T ss_pred ccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeecc-cc
Confidence 5899999999999999999999999999999999999998 9999999998876543 357999999988665 69
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++... .+.+++.+++...+.+. ....|+++.||.+|+.+ .
T Consensus 405 i~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~l~~--------~i~~lp~gl~t~~~~~g-~ 450 (569)
T PRK10789 405 VANNIALGRPD-------------------------ATQQEIEHVARLASVHD--------DILRLPQGYDTEVGERG-V 450 (569)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHcCCHH--------HHHhCcCcccceecCCC-C
Confidence 99999886311 11111222221111110 12357888899999864 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. .++| ++.++|+. +....+|+|++|++|+
T Consensus 451 ~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t-ii~itH~~-~~~~~~d~i~~l~~G~ 526 (569)
T PRK10789 451 MLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRT-VIISAHRL-SALTEASEILVMQHGH 526 (569)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCE-EEEEecch-hHHHcCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999863 2445 44466655 4567899999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++.+|+++++.+
T Consensus 527 i~~~g~~~~l~~ 538 (569)
T PRK10789 527 IAQRGNHDQLAQ 538 (569)
T ss_pred EEEecCHHHHHH
Confidence 999999998864
No 403
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.16 Aligned_cols=212 Identities=19% Similarity=0.285 Sum_probs=167.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|....+|+|.++|+++.+... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 358999999999999999999999999999999999975311138999999998765322 356999999988776 6
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+||+.++....+.... . ......++.+++.+||........ ++.+
T Consensus 94 tv~eni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN--------K------------------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC--------h------------------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999986433211000 0 001122456788888853211111 2345
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+.+|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEEECC
Confidence 67999999999999999999999999999999999999999999998742 456666889999999999999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 404
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=320.03 Aligned_cols=210 Identities=18% Similarity=0.256 Sum_probs=166.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc---CCCCCcceEEEECCccCCCcc-----ccceEEEecCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKL---GKDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDL 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~---~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~ 238 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.. ++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 35899999999999999999999999999999999973 331 13899999999875421 1356999999988
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
+++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 6999999886433211000 001123456788888865322222
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEE
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLI 398 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 398 (1436)
+..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+++
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEE
Confidence 234557999999999999999999999999999999999999999999999742 3 566668899889999999999
Q ss_pred EecCCeEEEecChhHHH
Q 046196 399 LLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 399 vL~~G~iv~~G~~~~~~ 415 (1436)
+|++|+++++|+++++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 405
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.83 Aligned_cols=210 Identities=18% Similarity=0.256 Sum_probs=164.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 48999999999999999999999999999999999986 2111389999999887421 1135699999998777
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ +||+||+.++.+...... . .+....++.+++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------R------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------H------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 6 899999988643211000 0 001123456778888743211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+....||||||||++||+||+.+|++|+|||||+|||..++..+.+.|+++.. +++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998742 356667889888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 406
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=328.07 Aligned_cols=205 Identities=18% Similarity=0.299 Sum_probs=166.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCC----c----cccceEEEecCCCC-
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEE----F----VPQRTSAYISQNDL- 238 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~~~- 238 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4899999999999999999999999999999999999987 9999999987642 1 12356999999963
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTM 317 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 317 (1436)
.+...||+||+.|+....+.. .. +....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN----------KQ------------------------EAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhHhcCC
Confidence 234569999998864321100 00 0011245578888995 455544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
+ ..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||+|
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999988653 3556666889998999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 407
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.8e-34 Score=315.24 Aligned_cols=195 Identities=22% Similarity=0.357 Sum_probs=161.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCc-----cccceEEEecCCCCcCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHIG 241 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~ 241 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999999987 99999999877421 11357999999998888
Q ss_pred CCCHHHHHHhhhh-hcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 242 EMTVRETLAFSAR-CQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 242 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
.+||+||+.++.. ..+.. . .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------K------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999988642 11100 0 001123456788899987666554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+++|+.++|+..++.+++|+|++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999864 3456666889999999999999999
Q ss_pred cCCeE
Q 046196 401 SDGQI 405 (1436)
Q Consensus 401 ~~G~i 405 (1436)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 408
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-33 Score=315.99 Aligned_cols=202 Identities=22% Similarity=0.366 Sum_probs=168.8
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCHHHHHH
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTVRETLA 250 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1436)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998754322 356999999998898999999998
Q ss_pred hhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 046196 251 FSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQ 330 (1436)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 330 (1436)
++... .... .+ .....++.+++.+||++..++.+ +.|||||
T Consensus 94 ~~~~~-~~~~--------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKL--------NA-------------------------AQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccCC--------CH-------------------------HHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 0000 00 01123466788999987777655 4699999
Q ss_pred hhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEecC
Q 046196 331 RKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQGP 410 (1436)
Q Consensus 331 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 410 (1436)
||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+. .+++++.++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQE-RQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999987653 24566668899989999999999999999999999
Q ss_pred hhHHHH
Q 046196 411 RENVLE 416 (1436)
Q Consensus 411 ~~~~~~ 416 (1436)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887753
No 409
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=322.56 Aligned_cols=219 Identities=23% Similarity=0.281 Sum_probs=177.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578999988763 245899999999999999999999999999999999987631 4689999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046196 915 YPKNQ----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSG 990 (1436)
Q Consensus 915 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~ 990 (1436)
.++.. ...++.++|++|+..+++ .|++||+.+..... ...+.++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234567999999988887 89999998764322 112233334456788899988643221111 12568
Q ss_pred CCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEE
Q 046196 991 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEE 1070 (1436)
Q Consensus 991 LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1070 (1436)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999976 57788999999996 789
Q ss_pred EEEcCC
Q 046196 1071 IYVGPL 1076 (1436)
Q Consensus 1071 ~y~G~~ 1076 (1436)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998875
No 410
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.6e-34 Score=315.22 Aligned_cols=194 Identities=30% Similarity=0.436 Sum_probs=160.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCC-cCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL-HIGE 242 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~ 242 (1436)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999987 9999999988754321 356899999964 4678
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 99999998864321100 0 001123456788899987666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++..+||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA--EGKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998865 256677788999999999999999999
Q ss_pred Ce
Q 046196 403 GQ 404 (1436)
Q Consensus 403 G~ 404 (1436)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 411
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.45 Aligned_cols=211 Identities=20% Similarity=0.312 Sum_probs=166.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 4899999999999999999999999999999999998741 01289999999887531 1235689999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.|+....+.... + .+....++.+++.+||.+...... +
T Consensus 113 ~-~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 P-KSIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred C-CcHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 4999999987543211000 0 000123456788888864211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++..++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998753 3 56666889888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 412
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.3e-34 Score=313.39 Aligned_cols=199 Identities=22% Similarity=0.287 Sum_probs=164.4
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45667766542 2458999999999999999999999999999999999987 56899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046196 919 Q--ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQR 996 (1436)
Q Consensus 919 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqr 996 (1436)
. ...++.++|++|++.+++.+|+.|++.+...... . ...+.++++++.+++.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988999999999988654321 1 1234578899999998766654 457999999
Q ss_pred HHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 997 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 997 qRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
||++||++|+++|++++|||||+|||+.+...+++.|++++++|+|||+++|+++ .+-..-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999976 344444555554
No 413
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=356.16 Aligned_cols=218 Identities=27% Similarity=0.335 Sum_probs=181.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 478888887652 2459999999999999999999999999999999999986 5689999999876
Q ss_pred Cccc----ccceEEEeecCCCCCCCCcHHHHHHHHHHhc--C-CC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 918 NQET----FARISGYCEQTDIHSPHVTVYESLVYSAWLR--L-PP-EVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 918 ~~~~----~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~--~-~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.... .++.++|++|+..+++.+||+|++.+..... . .. ..+.++..+.++++++.+++.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 4311 2346999999998899999999998653210 0 00 0122334456889999999987777653 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
+|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+...+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999976 56778999999996 78
Q ss_pred EEEEcCCC
Q 046196 1070 EIYVGPLG 1077 (1436)
Q Consensus 1070 ~~y~G~~~ 1077 (1436)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 89998764
No 414
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.4e-33 Score=316.60 Aligned_cols=205 Identities=27% Similarity=0.390 Sum_probs=171.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCHH
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTVR 246 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~ 246 (1436)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 5999999999999999999999999999999999999987 9999999988764333 35799999999888889999
Q ss_pred HHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 046196 247 ETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGI 326 (1436)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 326 (1436)
||+.+..+..+.. .. .....++.+++.+||.+..++.+ +.|
T Consensus 91 enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHP----------KA------------------------KIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 9998864422100 00 00112356788889976666554 469
Q ss_pred ChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEE
Q 046196 327 SGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIV 406 (1436)
Q Consensus 327 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv 406 (1436)
|||||||++||++++.+|++++|||||+|||..+...+.+.|+++.. ..+.+++.++|...++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 22456666788888899999999999999999
Q ss_pred EecChhHHH
Q 046196 407 YQGPRENVL 415 (1436)
Q Consensus 407 ~~G~~~~~~ 415 (1436)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988774
No 415
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=320.62 Aligned_cols=210 Identities=19% Similarity=0.270 Sum_probs=167.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 34 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 113 (267)
T PRK14237 34 EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPF 113 (267)
T ss_pred eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCccc
Confidence 5899999999999999999999999999999999998641 11389999999887532 1145699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.++.+..+... + ......++.+++.+||.+..+... +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~ 158 (267)
T PRK14237 114 A-KSIYENITFALERAGVKD---------K------------------------KVLDEIVETSLKQAALWDQVKDDL-H 158 (267)
T ss_pred c-ccHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCchhhhhh-c
Confidence 6 699999988643221100 0 001123445678888864322222 3
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.||||||||++|||+++.+|++++|||||+|||+.+...+.+.|+++.. +.+|+.++|+..++.++||++++|
T Consensus 159 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l 235 (267)
T PRK14237 159 KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNMQQAARASDYTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhcCEEEEE
Confidence 45567999999999999999999999999999999999999999999998742 356677888888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 236 YLGDLIEYDKTRNIF 250 (267)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998874
No 416
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.1e-34 Score=312.63 Aligned_cols=184 Identities=27% Similarity=0.340 Sum_probs=159.2
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 458999999999999999999999999999999999986 568999999987532 2345679999999888889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
+|++.+.... . ..+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999874311 1 123468899999998766654 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
|+.+...+.+.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998777999999999976 577788998876
No 417
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=318.91 Aligned_cols=210 Identities=20% Similarity=0.330 Sum_probs=164.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222389999999887431 1245699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ +||+||+.++....+.... ......++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999986433211000 000112345677777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 56667889988999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 418
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.60 Aligned_cols=211 Identities=21% Similarity=0.313 Sum_probs=166.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 58999999999999999999999999999999999987411 1389999999876421 1235699999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+.+||+||+.++....+... . ......++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------K------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 99999999988653221000 0 001123455678888742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..+..|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998743 3 56666889999999999999999
Q ss_pred c------CCeEEEecChhHHH
Q 046196 401 S------DGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~------~G~iv~~G~~~~~~ 415 (1436)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 89999999998874
No 419
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=3.6e-32 Score=350.28 Aligned_cols=123 Identities=24% Similarity=0.308 Sum_probs=99.5
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCcce
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-REALVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1013 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~---~p~ill 1013 (1436)
++||.|.+.|...+. .. ....++++.+||... .+.. ...||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777777755331 11 123577888898653 3333 45799999999999999997 599999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK-----RGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 57899999975
No 420
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.5e-32 Score=352.17 Aligned_cols=211 Identities=23% Similarity=0.368 Sum_probs=174.7
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|++|+++ +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|++||.+
T Consensus 472 ~~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 4699999999874 12359999999999999999999999999999999999987 579999999988
Q ss_pred CC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+. ...+++.+|||+|++.+++ .|++||+.+... ++.+.+ .+.++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~~----~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQD----EIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCHH----HHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 64 3456788999999998876 499999986421 122222 24556666655432 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
+.+||||||||++|||||+++|+||+||||||+||+.+...+++.|+++ +|+|+|+++|+++ ....+|+|++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4799999999975 5678999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 789999984
No 421
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=320.15 Aligned_cols=219 Identities=20% Similarity=0.261 Sum_probs=173.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 477888877652 235899999999999999999999999999999999987632 1369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|+..+++. |++||+.+....+.. . ..+...+.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT-T-AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC-C-hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999888875 999999886543311 1 112223456777888887532111111 1256
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 899999999999999999999999999999999999999999999985 5899999999976 57788999999986 68
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 8888874
No 422
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=318.15 Aligned_cols=212 Identities=18% Similarity=0.259 Sum_probs=167.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1436)
.++|+|+|++|++||+++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|+..+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111389999999887432 124569999999988
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++.+||+||+.++.+..+... .. +....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------RS------------------------EADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 999999999987643211000 00 00113455677888754211111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+..+..||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ + ++|+.++|+..++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 133457999999999999999999999999999999999999999999999853 3 5666688999899999999999
Q ss_pred ecCCeEEEecChhHHH
Q 046196 400 LSDGQIVYQGPRENVL 415 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~ 415 (1436)
|++|+++..|+++++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 423
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=318.40 Aligned_cols=211 Identities=19% Similarity=0.304 Sum_probs=166.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCcc-----ccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 239 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998751 113899999999875321 13569999999887
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++ +||+||+.|+....+.... .+....++.+++.+||.+......
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 76 8999999987543221000 000112345677887742111111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+..++.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. + .+++.++|+..++.+++|++++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEE
Confidence 234557999999999999999999999999999999999999999999998753 3 5666678888899999999999
Q ss_pred ecCCeEEEecChhHHH
Q 046196 400 LSDGQIVYQGPRENVL 415 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~ 415 (1436)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999998874
No 424
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=321.99 Aligned_cols=204 Identities=21% Similarity=0.272 Sum_probs=168.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc---ccceEEEecCCCC-cCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV---PQRTSAYISQNDL-HIGEM 243 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 243 (1436)
++|+|+|+++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 21 NQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 5899999999999999999999999999999999999998 999999998875422 2356999999963 67788
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||.||+.++.+..+.. .. +....++.+++.+||.+..++.+
T Consensus 98 tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~----- 138 (277)
T PRK13642 98 TVEDDVAFGMENQGIP----------RE------------------------EMIKRVDEALLAVNMLDFKTREP----- 138 (277)
T ss_pred CHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 9999998764321110 00 00123466788899987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~~~-~~d~i~~l~~G 216 (277)
T PRK13642 139 ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDEAA-SSDRILVMKAG 216 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH-hCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999988652 2556666888888875 69999999999
Q ss_pred eEEEecChhHHH
Q 046196 404 QIVYQGPRENVL 415 (1436)
Q Consensus 404 ~iv~~G~~~~~~ 415 (1436)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (277)
T PRK13642 217 EIIKEAAPSELF 228 (277)
T ss_pred EEEEeCCHHHHh
Confidence 999999998875
No 425
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.3e-34 Score=314.95 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=160.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcC--CCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHI--GEMT 244 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~--~~lT 244 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 45999999999999999999999999999999999999988 9999999987642 345799999997653 3489
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.++..... ..+.. .. ......++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~--~~~~~---~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHK--GLFRR---LS-------------------------KADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhcccccc--ccccC---CC-------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 9999988643110 00000 00 001123466788999987666554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++++.++|+..++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 5999999999999999999999999999999999999999999999864 3556777889999999999999999886
Q ss_pred EEEec
Q 046196 405 IVYQG 409 (1436)
Q Consensus 405 iv~~G 409 (1436)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 426
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=320.19 Aligned_cols=219 Identities=24% Similarity=0.262 Sum_probs=174.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCc---eeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---VSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 914 (1436)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+.+ .+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478888887652 2359999999999999999999999999999999999754222 489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ....+..+.++++++.+++.+....... ..+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87642 2335679999999888874 999999987544311 1222334457788888887531111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999875 689999999976 46678999999996 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 8888875
No 427
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.6e-32 Score=354.34 Aligned_cols=210 Identities=28% Similarity=0.397 Sum_probs=174.5
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999998742 22469999999999999999999999999999999999987 579999999998
Q ss_pred CC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+. ...+++.+|||+|++.+++ .|++||+.+.. | +.+.+ .+.++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~~~----~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIPDA----DLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCCHH----HHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 64 3456788999999988875 69999997531 1 22222 24566666666543 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
+.+||||||||++|||||+++|+||+||||||+||+.+...+++.|++ .++|+|+++|+++ ....+|+|++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999975 5677999999986
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 799999985
No 428
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.43 Aligned_cols=218 Identities=18% Similarity=0.214 Sum_probs=175.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.+.++++++.+ +++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 8 ~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 74 (261)
T PRK14263 8 VMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLG 74 (261)
T ss_pred eEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECC
Confidence 46666666554 2346999999999999999999999999999999999987531 2689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ..+++.++|++|+..++ .+|+.||+.+....+. .. .+..+.++++++.+++.+..+...+ ...+
T Consensus 75 ~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 148 (261)
T PRK14263 75 QDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---YK-GDLGDRVKHALQGAALWDEVKDKLK-VSGL 148 (261)
T ss_pred EeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---ch-HHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 13456799999998776 5999999988754331 11 2233467888999998643222222 1356
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe----
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK---- 1065 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~---- 1065 (1436)
.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~ 226 (261)
T PRK14263 149 SLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDIS 226 (261)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 899999999999999999999999999999999999999999999985 4799999999986 5778899999996
Q ss_pred ---cCcEEEEEcCC
Q 046196 1066 ---RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ---~Gg~~~y~G~~ 1076 (1436)
++|+++..|+.
T Consensus 227 ~~~~~G~i~~~g~~ 240 (261)
T PRK14263 227 QGTRTGYLVEMGPT 240 (261)
T ss_pred cccCCceEEEeCCH
Confidence 45899999975
No 429
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.7e-33 Score=357.40 Aligned_cols=207 Identities=21% Similarity=0.318 Sum_probs=165.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.++|.++.+... ++.++||+|++.++ +.|
T Consensus 349 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf-~~t 424 (585)
T TIGR01192 349 QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDAGLF-NRS 424 (585)
T ss_pred ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCCccC-ccc
Confidence 4899999999999999999999999999999999999998 9999999998876543 46799999998866 579
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
++|||.++... .+.+++.+++...+.+ .. ...+++..||.+|+.+ .
T Consensus 425 i~~Ni~~~~~~-------------------------~~~~~~~~a~~~~~~~------~~--i~~l~~g~~t~~~~~~-~ 470 (585)
T TIGR01192 425 IRENIRLGREG-------------------------ATDEEVYEAAKAAAAH------DF--ILKRSNGYDTLVGERG-N 470 (585)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhCcH------HH--HHhccccccchhcCCC-C
Confidence 99999886321 1111222222111111 01 2236677789998764 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++|||||+.+|++++|||||||||+.++..+.+.|++.. . +.+++.++|..+.+ +.+|+|++|++|+
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~-~~tvI~isH~~~~~-~~~d~i~~l~~G~ 546 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--K-NRTTFIIAHRLSTV-RNADLVLFLDQGR 546 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--C-CCEEEEEEcChHHH-HcCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998763 2 44555567766554 6799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (585)
T TIGR01192 547 LIEKGSFQELIQ 558 (585)
T ss_pred EEEECCHHHHHH
Confidence 999999998864
No 430
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=312.30 Aligned_cols=195 Identities=23% Similarity=0.337 Sum_probs=163.0
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCHHHHHH
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTVRETLA 250 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1436)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999988754332 356999999999888999999998
Q ss_pred hhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 046196 251 FSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGISGGQ 330 (1436)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 330 (1436)
++..... .. .+ .....++.+++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~--------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KL--------TA-------------------------EDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Cc--------cH-------------------------HHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7632110 00 00 01123456788999987766554 4699999
Q ss_pred hhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEEec
Q 046196 331 RKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVYQG 409 (1436)
Q Consensus 331 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~~G 409 (1436)
|||++||+|++.+|++++|||||+|||..++..+.+.|+++... .+.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999987642 2456666899999999999999999999998764
No 431
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=315.63 Aligned_cols=204 Identities=26% Similarity=0.439 Sum_probs=171.5
Q ss_pred eeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-cceEEEecCCCCcCCCCCHHH
Q 046196 169 ILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDLHIGEMTVRE 247 (1436)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E 247 (1436)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765322 357999999998898999999
Q ss_pred HHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 046196 248 TLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGIS 327 (1436)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 327 (1436)
|+.++....+... . +....++.+++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------K------------------------EIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221000 0 01112355788899987776655 4699
Q ss_pred hhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEE
Q 046196 328 GGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVY 407 (1436)
Q Consensus 328 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~ 407 (1436)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++.... +++++.++|+.+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999976532 4566668888889999999999999999999
Q ss_pred ecChhHHH
Q 046196 408 QGPRENVL 415 (1436)
Q Consensus 408 ~G~~~~~~ 415 (1436)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 432
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=324.72 Aligned_cols=215 Identities=21% Similarity=0.306 Sum_probs=173.5
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--C-CceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 914 (1436)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999887752 2348999999999999999999999999999999999743 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+.....+.+.++++.+++.. ..+.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 178 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDK---- 178 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhC----
Confidence 87532 1245679999999888775 999999986533211 112223455678888888742 2232
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
.+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 179 -~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 179 -NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2468999999999999999999999999999999999999999999999865 689999999986 5677899999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 433
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-33 Score=387.16 Aligned_cols=206 Identities=22% Similarity=0.278 Sum_probs=170.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++|+|||.+||+|++|||||||+++|.|+++|+ +|+|.+||.++++... ++.++||||++.+|. .|
T Consensus 1253 ~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~-GT 1328 (1622)
T PLN03130 1253 PVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFS-GT 1328 (1622)
T ss_pred ceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEECCCCcccc-cc
Confidence 4899999999999999999999999999999999999998 9999999999987654 467999999998765 59
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|||||..+.. .+.+++.++++..+.+.. +-.|+.+.||.||+++.
T Consensus 1329 IreNLd~~~~--------------------------~tdeei~~Al~~a~l~~~--------I~~lp~GLdt~Vge~G~- 1373 (1622)
T PLN03130 1329 VRFNLDPFNE--------------------------HNDADLWESLERAHLKDV--------IRRNSLGLDAEVSEAGE- 1373 (1622)
T ss_pred HHHHhCcCCC--------------------------CCHHHHHHHHHHcCcHHH--------HHhCccccCccccCCCC-
Confidence 9999986521 112233344333332211 22467888999998655
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. ++.|++++.|.. ++...||+|+||++|+
T Consensus 1374 nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~---~~~TvI~IAHRL-~tI~~~DrIlVLd~G~ 1449 (1622)
T PLN03130 1374 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF---KSCTMLIIAHRL-NTIIDCDRILVLDAGR 1449 (1622)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC---CCCEEEEEeCCh-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999853 345566576765 4556799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
|+++|+++++++
T Consensus 1450 IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1450 VVEFDTPENLLS 1461 (1622)
T ss_pred EEEeCCHHHHHh
Confidence 999999999974
No 434
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=322.50 Aligned_cols=215 Identities=20% Similarity=0.258 Sum_probs=173.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--C-CceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999987653 2359999999999999999999999999999999999742 1 14689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|++.+++. |++||+.+...... ........+.+++.++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1235679999999888775 99999987643221 1112223345677888888752 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999976 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 789998874
No 435
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=319.20 Aligned_cols=210 Identities=19% Similarity=0.304 Sum_probs=165.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999987 3212389999999987421 1235699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+. ||+||+.|+.+..+... .. +....++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKN---------KK------------------------KLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 99999988643221100 00 00112345677778753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..++.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. +.+++.++|+..++.+.+|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998742 356666888888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998874
No 436
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.45 Aligned_cols=215 Identities=25% Similarity=0.347 Sum_probs=173.4
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC--C-ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 914 (1436)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478889887652 23599999999999999999999999999999999998752 1 3689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|++.+++ .||+||+.+...... ....+...+.++++++.+++.. ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 143 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDR---- 143 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhcc----
Confidence 87532 123567999999988776 799999987643321 1112223345778888888842 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
.+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|+
T Consensus 144 -~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 144 -NAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 2468999999999999999999999999999999999999999999999854 689999999976 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 688888874
No 437
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-33 Score=352.03 Aligned_cols=219 Identities=21% Similarity=0.340 Sum_probs=179.3
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 46777776652 24599999999999999999999999999999999998764336899999998764
Q ss_pred ccc----ccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 046196 919 QET----FARISGYCEQTDIHSPHVTVYESLVYSAWLRLPP-EVDSDTRKMFVEEVMELVELNPIR-EALVGLPGVSGLS 992 (1436)
Q Consensus 919 ~~~----~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~LS 992 (1436)
... .++.+||++|++.+++.+||+|++.+........ ....++..+.++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356899999998899999999998764322111 122233445678999999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEE
Q 046196 993 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIY 1072 (1436)
Q Consensus 993 gGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y 1072 (1436)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999976 56778999999996 68888
Q ss_pred EcCCC
Q 046196 1073 VGPLG 1077 (1436)
Q Consensus 1073 ~G~~~ 1077 (1436)
.|+..
T Consensus 222 ~~~~~ 226 (500)
T TIGR02633 222 TKDMS 226 (500)
T ss_pred ecCcc
Confidence 88764
No 438
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=324.12 Aligned_cols=217 Identities=24% Similarity=0.400 Sum_probs=173.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578889887652 12458999999999999999999999999999999999977 5799999999876
Q ss_pred CcccccceEEEeecCCCCC--CCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046196 918 NQETFARISGYCEQTDIHS--PHVTVYESLVYSAWLRLP-PEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTE 994 (1436)
Q Consensus 918 ~~~~~~~~~gyv~q~~~~~--~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgG 994 (1436)
.....++.++|++|++.+. ...+++|++.+....... .........+.++++++.+++.+..++. +..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQ-----IGELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCC-----cccCCHH
Confidence 4322234689999987542 234788888653211000 0011122334567889999998777665 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEc
Q 046196 995 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVG 1074 (1436)
Q Consensus 995 qrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G 1074 (1436)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999976 577889999776 4 7899988
Q ss_pred CC
Q 046196 1075 PL 1076 (1436)
Q Consensus 1075 ~~ 1076 (1436)
+.
T Consensus 224 ~~ 225 (272)
T PRK15056 224 PT 225 (272)
T ss_pred CH
Confidence 75
No 439
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.2e-33 Score=322.40 Aligned_cols=207 Identities=21% Similarity=0.262 Sum_probs=169.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCC--cCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL--HIG 241 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~--~~~ 241 (1436)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc-ccccccccC
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE-VCADTMVGD 320 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 320 (1436)
.+||.|++.+..+.... ... .+....++.+++.+||. +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LEP------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccC---------CCH------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999876432100 000 00112345678999994 5555443
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++.+. .+++|+.++|+..++..+||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 3566666889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 440
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.3e-33 Score=308.11 Aligned_cols=178 Identities=28% Similarity=0.355 Sum_probs=150.1
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-----ccccceEEEeecCCC-CCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-----ETFARISGYCEQTDI-HSP 937 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~-~~~ 937 (1436)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 459999999999999999999999999999999999887 569999999987631 123567899999863 333
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 046196 938 HVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1017 (1436)
Q Consensus 938 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEP 1017 (1436)
..||+||+.+..... ..+.++..+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865432 123333445678899999998776665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 046196 1018 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1051 (1436)
Q Consensus 1018 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1051 (1436)
|+|||+.++..+.+.|++++++|+|||+++|+++
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 441
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-33 Score=352.64 Aligned_cols=211 Identities=22% Similarity=0.323 Sum_probs=179.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488899987763 2459999999999999999999999999999999999986 5699999999876
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQE---T-FARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
... . .++.+||++|++.+++.+||+|++.+.... ..+.++.++++++.+++.+..+.. +..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSS-----AGSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCC-----hhhCCH
Confidence 421 1 124589999999999999999999874310 122345678899999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999976 46788999999996 688899
Q ss_pred cCCC
Q 046196 1074 GPLG 1077 (1436)
Q Consensus 1074 G~~~ 1077 (1436)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8863
No 442
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=296.60 Aligned_cols=204 Identities=25% Similarity=0.388 Sum_probs=179.5
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCC
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPH 938 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~ 938 (1436)
+.+.+|+++|..|++|.+++|+|||||||||||.+++++.+ ..+|+|+++|.++.. ..+++.++..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45779999999999999999999999999999999998876 579999999998643 4567778888998888889
Q ss_pred CcHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 046196 939 VTVYESLVYSAWLRLPP--EVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1016 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~--~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDE 1016 (1436)
+||+|-+.|+. .|. ....++.+..+++.++.++|+++.|... .+||||||||.-||+.|+++.+.++|||
T Consensus 90 lTV~dLv~FGR---fPYSqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDE 161 (252)
T COG4604 90 LTVRDLVGFGR---FPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDE 161 (252)
T ss_pred eEHHHHhhcCC---CcccCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecC
Confidence 99999999873 343 2334556677999999999999999874 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1017 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1017 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
|.++||...+..+|+.||+++++ |+|||++.||.+. .-...|+|+-|++ |+++..|++.
T Consensus 162 PLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 162 PLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 99999999999999999999876 9999999999874 4557899999996 7999999973
No 443
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.76 Aligned_cols=219 Identities=24% Similarity=0.302 Sum_probs=172.0
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCc---eeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---VSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 914 (1436)
.+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+..+ .+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478888887652 2358999999999999999999999999999999999753112 489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|+..+++ .|++||+.+....+.. ...+...+.+.+.++.+++......... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 87632 134567999999988887 6999999886543311 1122223345677787776421111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ .+.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 589999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 8888874
No 444
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.40 Aligned_cols=211 Identities=20% Similarity=0.332 Sum_probs=166.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1436)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 11389999999877532 123569999999887
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++ +||+||+.++....+.... ......++..++.+|+.+..+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-H
Confidence 76 8999999886432211000 00011234567777775321111 1
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
++.+++||||||||++||+|++.+|++++|||||+|||..+...+.+.|+++.. + ++++.++|+..++.+++|+|++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 344567999999999999999999999999999999999999999999998743 3 5666688888889999999999
Q ss_pred ecCCeEEEecChhHHH
Q 046196 400 LSDGQIVYQGPRENVL 415 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~ 415 (1436)
|++|+++..|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988874
No 445
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=307.27 Aligned_cols=197 Identities=26% Similarity=0.412 Sum_probs=170.9
Q ss_pred ecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-------ccceEEEecCCCCcCCCC
Q 046196 171 HDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-------PQRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 171 ~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~l 243 (1436)
=++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|++|||+|+..+||.+
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3677777776899999999999999999999999999 999999998664321 247899999999999999
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
||+-||.|+...- .....|++.+.||++|..+ +++
T Consensus 92 tVrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~-----R~P 126 (352)
T COG4148 92 TVRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLD-----RYP 126 (352)
T ss_pred EEecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHh-----hCC
Confidence 9999999985321 0112366788999999887 455
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
..|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.+.. +.-|+.++|...|+.+++|+|++|++|
T Consensus 127 ~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 127 GTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred CccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCC
Confidence 6799999999999999999999999999999999999999999999987654 455777899999999999999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999998854
No 446
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.1e-33 Score=321.05 Aligned_cols=223 Identities=23% Similarity=0.320 Sum_probs=177.7
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+.... .+ + ...++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~-~~--~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG-LS--G-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc-cc--c-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888877653100 00 0 0012469999999999999999999999999999999999876 57999999998764
Q ss_pred cc------cccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046196 919 QE------TFARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVS 989 (1436)
Q Consensus 919 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~ 989 (1436)
.. ..++.++|++|+. .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2356799999997 3667899999987643211 1122334445688999999996 455544 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999976 56778999999985 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 229 ~i~~~g~~ 236 (268)
T PRK10419 229 QIVETQPV 236 (268)
T ss_pred EEeeeCCh
Confidence 89999875
No 447
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=312.82 Aligned_cols=223 Identities=22% Similarity=0.307 Sum_probs=180.5
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC-C-C-ceeEEEEECCc
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YVSGSITISGY 915 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~-~-~-~~~G~i~i~g~ 915 (1436)
++.+|++..+... .+...+++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4567766555421 123469999999999999999999999999999999999886 2 2 46789999998
Q ss_pred cCC---cc---c-ccceEEEeecCC--CCCCCCcHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHHcCCcccccccccC
Q 046196 916 PKN---QE---T-FARISGYCEQTD--IHSPHVTVYESLVYSAWLRLPPEV-DSDTRKMFVEEVMELVELNPIREALVGL 985 (1436)
Q Consensus 916 ~~~---~~---~-~~~~~gyv~q~~--~~~~~lTv~e~l~~~~~l~~~~~~-~~~~~~~~v~~vl~~l~l~~~~~~~~g~ 985 (1436)
++. .+ . +-+.++|++|++ .+.|.+||.+.+.=...... .. ..++.++++.++++.+++.+-......
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~- 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRLKS- 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHHhh-
Confidence 752 22 1 235699999996 47799999888765544321 12 345556778899999999865433322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhCeEEEE
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLM 1064 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l 1064 (1436)
.+.+|||||||||.||.||+.+|++|+.||||++||...+++|+++|+++.+ .|.|+|++|||.. -+.+.+|||.||
T Consensus 150 -YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VM 227 (316)
T COG0444 150 -YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVM 227 (316)
T ss_pred -CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEE
Confidence 3578999999999999999999999999999999999999999999999986 5999999999987 488999999999
Q ss_pred ecCcEEEEEcCC
Q 046196 1065 KRGGEEIYVGPL 1076 (1436)
Q Consensus 1065 ~~Gg~~~y~G~~ 1076 (1436)
.. |++|..||.
T Consensus 228 Ya-G~iVE~g~~ 238 (316)
T COG0444 228 YA-GRIVEEGPV 238 (316)
T ss_pred EC-cEEEEeCCH
Confidence 95 899999985
No 448
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=302.76 Aligned_cols=156 Identities=29% Similarity=0.450 Sum_probs=141.9
Q ss_pred cccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcHH
Q 046196 865 EFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 865 ~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+.
T Consensus 14 ~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 91 (173)
T cd03230 14 TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTVR 91 (173)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcHH
Confidence 58999999999999999999999999999999999876 568999999987643 23456799999999888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1022 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD 1022 (1436)
|++. ||||||||++||++|+.+|++|+|||||+|||
T Consensus 92 ~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~LD 127 (173)
T cd03230 92 ENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGLD 127 (173)
T ss_pred HHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCC
Confidence 9873 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1023 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1023 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+.++..+.+.|++++++|.|||+++|+++ .+.+.+|++++|++|
T Consensus 128 ~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 128 PESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999877899999999976 567789999999975
No 449
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.3e-34 Score=321.17 Aligned_cols=196 Identities=24% Similarity=0.370 Sum_probs=154.6
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCc
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lT 940 (1436)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 458999999999999999999999999999999999986 568999999987532 234567999999987764 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKM-----FVEEVMELV--ELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1013 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~-----~v~~vl~~l--~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~ill 1013 (1436)
|.||+.+... ........+ ..++.++.+ ++....+. .+..|||||||||+|||+|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976421 111111000 112223332 23222222 246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.+...+.+.|+++++ |+|||+++|+++ .+ ..+|++++|++ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999864 899999999986 34 56999999996 789998874
No 450
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.6e-33 Score=317.74 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=167.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCcc-----CCCccc-------cceEEEecC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHG-----MEEFVP-------QRTSAYISQ 235 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 235 (1436)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5899999999999999999999999999999999999997 9999999987 554322 235999999
Q ss_pred CC--CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc-
Q 046196 236 ND--LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV- 312 (1436)
Q Consensus 236 ~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 312 (1436)
++ .+.+.+|+.||+.+.....+... .. +....++++++.+|+.+
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~-----------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGARH----------------------YG-----------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccCc----------------------HH-----------HHHHHHHHHHHHcCCChh
Confidence 96 35677899999976422110000 00 01123456788999963
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHH
Q 046196 313 CADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYE 392 (1436)
Q Consensus 313 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 392 (1436)
..++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++... .+.+|+.++|+..++.+
T Consensus 144 ~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHH
Confidence 445443 469999999999999999999999999999999999999999999987653 35667778999999999
Q ss_pred hcccEEEecCCeEEEecChhHHH
Q 046196 393 LFDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 393 ~~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 451
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=322.19 Aligned_cols=213 Identities=24% Similarity=0.299 Sum_probs=172.9
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCC---CceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999987652 23599999999999999999999999999999999998752 14689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP----IREALVGL 985 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 985 (1436)
.++.. ...++.++|++|+..+++. ||.||+.+....+. ... ...+.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654331 112 23345788899998853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEE-EE
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELL-LM 1064 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~-~l 1064 (1436)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+...+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 468999999999999999999999999999999999999999999999976 489999999976 5677899976 55
Q ss_pred ecCcEEEEEcCC
Q 046196 1065 KRGGEEIYVGPL 1076 (1436)
Q Consensus 1065 ~~Gg~~~y~G~~ 1076 (1436)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 65 788888874
No 452
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.9e-33 Score=314.87 Aligned_cols=203 Identities=23% Similarity=0.374 Sum_probs=166.6
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899887652 2459999999999999999999999999999999999876 5799999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELN-PIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~LSg 993 (1436)
.. ..+++.++|++|+..+++ .|++||+.+....+.. .. ..+.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 224567899999988876 5999999875433211 11 123467899999995 344443 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++ |.|||+++|+++ .+ ..+|++++|++.+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~ 214 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHA 214 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEeccc
Confidence 9999999999999999999999999999999999999999998754 899999999986 34 5699999996433
No 453
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-33 Score=317.97 Aligned_cols=207 Identities=18% Similarity=0.279 Sum_probs=162.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC-----CCCCcceEEEECCccCCCcc-----ccceEEEecCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG-----KDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQND 237 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~ 237 (1436)
++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 48999999999999999999999999999999999864 45 899999998875321 235699999998
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTM 317 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 317 (1436)
.+++. ||+||+.++.+..+... .. .....+...++.+|+.+.....
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERR---------KS------------------------VLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCc---------HH------------------------HHHHHHHHHHHHcCCCcchHHH
Confidence 87774 99999988643211000 00 0011233456667764211011
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
. ++.+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|+|
T Consensus 158 ~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 L-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred H-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1 234457999999999999999999999999999999999999999999999743 3 56666888888899999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 454
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.1e-32 Score=350.12 Aligned_cols=212 Identities=29% Similarity=0.439 Sum_probs=174.4
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++++|++|.++. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 46999999998741 22458999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
+++ ..+++.++||+|++.+++ .|++||+.+.. | +.+.+ .+.++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~~~----~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAPFE----HVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCCHH----HHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 643 456778999999988775 69999997532 2 22222 24455555555432 35555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
..+||||||||++|||||+++|++|+||||||+||+.+...+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 56899999999999999999999999999999999999999999999974 5899999999975 4567999999996
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999984
No 455
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=350.72 Aligned_cols=216 Identities=28% Similarity=0.343 Sum_probs=179.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 477888887652 2359999999999999999999999999999999999876 5689999999876
Q ss_pred Cc----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046196 918 NQ----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLST 993 (1436)
Q Consensus 918 ~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSg 993 (1436)
.. ...++.+||++|+..+++.+||.||+.+..........+..+.++.++++++.+++.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 42 123457999999998999999999998753211111122334445688999999998666554 457999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEE
Q 046196 994 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYV 1073 (1436)
Q Consensus 994 GqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~ 1073 (1436)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 56788999999996 677766
Q ss_pred cC
Q 046196 1074 GP 1075 (1436)
Q Consensus 1074 G~ 1075 (1436)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 64
No 456
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-33 Score=386.66 Aligned_cols=206 Identities=21% Similarity=0.270 Sum_probs=169.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++|+|||.++|+||+|||||||+++|.|+++|+ +|+|.+||.++++... ++.++||||++.+|. .|
T Consensus 1250 ~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~-gT 1325 (1495)
T PLN03232 1250 PVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFS-GT 1325 (1495)
T ss_pred cccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEECCCCeeeC-cc
Confidence 4899999999999999999999999999999999999998 9999999999987654 467999999998775 59
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|||||.++.. .+.+++.++++..+.+.. +-.+++..||.||+.+.
T Consensus 1326 Ir~NL~~~~~--------------------------~sdeei~~al~~a~l~~~--------I~~lp~GLdt~v~e~G~- 1370 (1495)
T PLN03232 1326 VRFNIDPFSE--------------------------HNDADLWEALERAHIKDV--------IDRNPFGLDAEVSEGGE- 1370 (1495)
T ss_pred HHHHcCCCCC--------------------------CCHHHHHHHHHHcCCHHH--------HHhCcCCCCceecCCCC-
Confidence 9999986421 111233333332222211 12467788999998654
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
+||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. ++.|++++.|.. ++...||+|++|++|+
T Consensus 1371 ~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~---~~~TvI~IAHRl-~ti~~~DrIlVL~~G~ 1446 (1495)
T PLN03232 1371 NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF---KSCTMLVIAHRL-NTIIDCDKILVLSSGQ 1446 (1495)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc---CCCEEEEEeCCH-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999752 345555576765 5566799999999999
Q ss_pred EEEecChhHHHH
Q 046196 405 IVYQGPRENVLE 416 (1436)
Q Consensus 405 iv~~G~~~~~~~ 416 (1436)
|++.|+++++++
T Consensus 1447 ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1447 VLEYDSPQELLS 1458 (1495)
T ss_pred EEEECCHHHHHh
Confidence 999999999874
No 457
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=319.49 Aligned_cols=209 Identities=20% Similarity=0.284 Sum_probs=162.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 106 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPF 106 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccc
Confidence 48999999999999999999999999999999999986310 1289999999876421 1235699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.++....+... + ....++.+++.+++....+... +
T Consensus 107 ~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~~-~ 149 (269)
T PRK14259 107 P-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDKL-N 149 (269)
T ss_pred h-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhhh-C
Confidence 7 599999998754321100 0 0012234566666632111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.++||++++|
T Consensus 150 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l 226 (269)
T PRK14259 150 ESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTAFF 226 (269)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999998742 356677889999999999999999
Q ss_pred cC-----------CeEEEecChhHHHH
Q 046196 401 SD-----------GQIVYQGPRENVLE 416 (1436)
Q Consensus 401 ~~-----------G~iv~~G~~~~~~~ 416 (1436)
++ |++++.|+++++.+
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred eccccccccccccceEEEeCCHHHHHh
Confidence 96 67999999988753
No 458
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=315.73 Aligned_cols=210 Identities=21% Similarity=0.334 Sum_probs=163.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK--DLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 489999999999999999999999999999999998753 112389999999987531 1235699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ +||+||+.++....+.... . .....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------~------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------K------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------H------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 6 8999999987543221000 0 00112344566666642111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998742 356666888888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 459
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=320.58 Aligned_cols=218 Identities=22% Similarity=0.251 Sum_probs=172.3
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCC--C-CceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 914 (1436)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999987653 2358999999999999999999999999999999999864 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREALVGLPGV 988 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~ 988 (1436)
.++.. ..+++.++|++|+..+++ .||+||+.+....+. ..+.+...+.+.++++.+++.. +.+.. . ..+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~-~~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRL-H-DNA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHH-h-cCc
Confidence 87632 234567999999988877 599999988653321 1112222344567777765431 21111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-G 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999865 799999999976 46778999999986 6
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
+++..|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 88888874
No 460
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.6e-33 Score=357.34 Aligned_cols=208 Identities=22% Similarity=0.377 Sum_probs=166.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
+.+|+|+|++++|||.++|+||||||||||+++|+|+++|. +|+|.+||.++++..+ ++.++|++|++.++ +.
T Consensus 353 ~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf-~~ 428 (576)
T TIGR02204 353 QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQDPVLF-AA 428 (576)
T ss_pred CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEccCCccc-cc
Confidence 35899999999999999999999999999999999999998 9999999999876654 35799999998855 67
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEML 323 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 323 (1436)
|++|||.++.+. .+.+++.++++..+.. +.++ .+++..||.+|+.+
T Consensus 429 Ti~~Ni~~~~~~-------------------------~~~~~~~~~l~~~~l~------~~i~--~l~~gl~t~i~~~g- 474 (576)
T TIGR02204 429 SVMENIRYGRPD-------------------------ATDEEVEAAARAAHAH------EFIS--ALPEGYDTYLGERG- 474 (576)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCcH------HHHH--hCCCCCCceeCCCC-
Confidence 999999886311 1111222222211111 1122 25667799998764
Q ss_pred ccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCC
Q 046196 324 RGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDG 403 (1436)
Q Consensus 324 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G 403 (1436)
..||||||||++||||++++|++++||||||+||..++..+.+.|++.. .+.++|.++|.. +....+|+|++|++|
T Consensus 475 ~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~---~~~t~IiitH~~-~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 475 VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM---KGRTTLIIAHRL-ATVLKADRIVVMDQG 550 (576)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh---CCCEEEEEecch-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999863 234555566765 556789999999999
Q ss_pred eEEEecChhHHHH
Q 046196 404 QIVYQGPRENVLE 416 (1436)
Q Consensus 404 ~iv~~G~~~~~~~ 416 (1436)
+++..|+++++.+
T Consensus 551 ~~~~~g~~~~l~~ 563 (576)
T TIGR02204 551 RIVAQGTHAELIA 563 (576)
T ss_pred EEEeeecHHHHHH
Confidence 9999999998754
No 461
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=297.52 Aligned_cols=211 Identities=22% Similarity=0.319 Sum_probs=185.8
Q ss_pred CCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccccceEEEecCCCCcCCC
Q 046196 163 RKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQRTSAYISQNDLHIGE 242 (1436)
Q Consensus 163 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~ 242 (1436)
+..++++++|+||.++||++.+++|||||||||.+++|+|+++|+ +|+|+++|.+++... ..+|||.|.+.-+++.
T Consensus 11 ~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k 86 (300)
T COG4152 11 SFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPK 86 (300)
T ss_pred ccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCcc
Confidence 345677999999999999999999999999999999999999998 999999999886543 3569999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 046196 243 MTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEM 322 (1436)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 322 (1436)
+||.|.|.|-++++|+... +.....++.|+.+++.......|
T Consensus 87 ~tv~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~kI---- 128 (300)
T COG4152 87 MTVEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKKI---- 128 (300)
T ss_pred CcHHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccchH----
Confidence 9999999999999886431 12234567899999987766444
Q ss_pred cccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecC
Q 046196 323 LRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSD 402 (1436)
Q Consensus 323 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~ 402 (1436)
..||-|.+|++.+-.+++.+|++++||||+|||||.++..+-+.+.++.. .|.+|+..+|.+..+.++||++++|++
T Consensus 129 -k~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~k 205 (300)
T COG4152 129 -KELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKK 205 (300)
T ss_pred -HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecC
Confidence 57999999999999999999999999999999999999999999999854 466777788999999999999999999
Q ss_pred CeEEEecChhHHHHHH
Q 046196 403 GQIVYQGPRENVLEFF 418 (1436)
Q Consensus 403 G~iv~~G~~~~~~~~f 418 (1436)
|+.|.+|+.+++..-|
T Consensus 206 G~~V~~G~v~~ir~~~ 221 (300)
T COG4152 206 GQTVLYGTVEDIRRSF 221 (300)
T ss_pred CceEEeccHHHHHHhc
Confidence 9999999999998754
No 462
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=320.39 Aligned_cols=220 Identities=19% Similarity=0.232 Sum_probs=173.9
Q ss_pred CceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEE
Q 046196 836 PHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITI 912 (1436)
Q Consensus 836 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i 912 (1436)
+..+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 34688999987752 235899999999999999999999999999999999986421 25899999
Q ss_pred CCccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046196 913 SGYPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPG 987 (1436)
Q Consensus 913 ~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~ 987 (1436)
+|.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ....+.+++.++.+++......... ..
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~ 158 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EK 158 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CC
Confidence 9987632 2345679999999887764 99999987643321 11 1122345677788776421111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe--
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK-- 1065 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-- 1065 (1436)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 ~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~ 236 (274)
T PRK14265 159 GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTE 236 (274)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecc
Confidence 467999999999999999999999999999999999999999999999865 789999999986 5778999999997
Q ss_pred ------cCcEEEEEcCC
Q 046196 1066 ------RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ------~Gg~~~y~G~~ 1076 (1436)
+.|+++..|+.
T Consensus 237 ~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 237 IDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccCceEEEeCCH
Confidence 25899999986
No 463
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.3e-33 Score=317.28 Aligned_cols=197 Identities=26% Similarity=0.359 Sum_probs=167.3
Q ss_pred ccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCcHH
Q 046196 866 FLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVTVY 942 (1436)
Q Consensus 866 iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~ 942 (1436)
+|+|+||++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.++.. ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999874 38999999987642 22345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCcceee
Q 046196 943 ESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1015 (1436)
Q Consensus 943 e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~-------~p~illlD 1015 (1436)
||+.+.... ..+.++..+.++++++.+++.+..+.. ++.||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345678999999998766654 45799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1016 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1016 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999976 57789999999996 788888875
No 464
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.2e-33 Score=318.09 Aligned_cols=215 Identities=25% Similarity=0.305 Sum_probs=172.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc-
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP- 916 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 916 (1436)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 367888877652 2358999999999999999999999999999999999987 568999999976
Q ss_pred ----CCc---cc----ccceEEEeecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 046196 917 ----KNQ---ET----FARISGYCEQTDI--HSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-IREAL 982 (1436)
Q Consensus 917 ----~~~---~~----~~~~~gyv~q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~ 982 (1436)
+.. .. .++.++|++|++. +.+.+|+.|++.+..... .. ....+..+.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 422 11 1346899999864 446679999986542211 10 111223456788999999963 44543
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeE
Q 046196 983 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDEL 1061 (1436)
Q Consensus 983 ~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1061 (1436)
++.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998654 899999999976 566789999
Q ss_pred EEEecCcEEEEEcCC
Q 046196 1062 LLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1062 ~~l~~Gg~~~y~G~~ 1076 (1436)
++|++ |+++..|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 788888874
No 465
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8.9e-32 Score=349.49 Aligned_cols=212 Identities=28% Similarity=0.441 Sum_probs=176.2
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|++|+++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999998741 23459999999999999999999999999999999999987 579999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPI-------REALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~ 986 (1436)
++. ..+++.++||+|++.+++ .|++||+.+.. | +.+.+ .+.++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~~~----~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YADDE----EILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCCHH----HHHHHHHHcChHHHHHhCcccccceecCC
Confidence 643 456788999999998876 59999997642 1 22222 24566666665432 35555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
..+||||||||++|||||+++|+||+||||||+||+.+...+++.|+++. +++|+|+++|+++ ....+|+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999876 4799999999975 5678999999986
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999974
No 466
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=315.71 Aligned_cols=212 Identities=19% Similarity=0.291 Sum_probs=166.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCcc-----ccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEFV-----PQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 239 (1436)
+++|+|+|++|++|++++|+||||||||||+++|+|..+ |+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 358999999999999999999999999999999999976 21113899999998764321 24579999999887
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCccccccccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVG 319 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 319 (1436)
++. ||+||+.++....+..... ......++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-
Confidence 775 9999998864322110000 000112455788889865322222
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEE
Q 046196 320 DEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLIL 399 (1436)
Q Consensus 320 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iiv 399 (1436)
+..++.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++. . +.+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEE
Confidence 23456799999999999999999999999999999999999999999999873 2 45666688998899999999999
Q ss_pred ecCCeEEEecChhHHH
Q 046196 400 LSDGQIVYQGPRENVL 415 (1436)
Q Consensus 400 L~~G~iv~~G~~~~~~ 415 (1436)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 467
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.9e-33 Score=309.05 Aligned_cols=199 Identities=20% Similarity=0.293 Sum_probs=165.3
Q ss_pred eeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-ccceEEEecCCCCcCCCCCHHH
Q 046196 169 ILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-PQRTSAYISQNDLHIGEMTVRE 247 (1436)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~E 247 (1436)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999998 999999999875432 2356999999998898999999
Q ss_pred HHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 046196 248 TLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLRGIS 327 (1436)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 327 (1436)
|+.+...... ... ......++.+++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 000 001123456788999987666554 4699
Q ss_pred hhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCeEEE
Q 046196 328 GGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQIVY 407 (1436)
Q Consensus 328 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~iv~ 407 (1436)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++... .+++|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999987642 35667778899889999999999999999999
Q ss_pred ecC
Q 046196 408 QGP 410 (1436)
Q Consensus 408 ~G~ 410 (1436)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 468
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.2e-34 Score=360.47 Aligned_cols=212 Identities=28% Similarity=0.458 Sum_probs=175.8
Q ss_pred CceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCc
Q 046196 836 PHSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGY 915 (1436)
Q Consensus 836 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 915 (1436)
...++|+|++|.++. ++++|+|+|++++|||++||+||||||||||++.|.|..+ +.+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCE
Confidence 346999999998752 3569999999999999999999999999999999999987 57999999998
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------CcccccccccC
Q 046196 916 PKNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVE-------LNPIREALVGL 985 (1436)
Q Consensus 916 ~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~-------l~~~~~~~~g~ 985 (1436)
+++. ..+++.++||+|+..++. -||+||+.++. + +.++++ ++++++..+ +.+-.|+.+|
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vg- 460 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATDEE----IEEALKLANAHEFIANLPDGYDTIVG- 460 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhChHHHHHhCcccccceec-
Confidence 8653 557788999999988887 89999998753 1 123222 233333322 2234578887
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 986 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 986 ~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
+++..||||||||++||||+++||+||+||||||+||+.+...+++.++++. +|+|+++++|+++ ....+|+|++|+
T Consensus 461 e~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~ 537 (567)
T COG1132 461 ERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD 537 (567)
T ss_pred CCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE
Confidence 3456899999999999999999999999999999999999999999999876 5789999999985 455599999999
Q ss_pred cCcEEEEEcCC
Q 046196 1066 RGGEEIYVGPL 1076 (1436)
Q Consensus 1066 ~Gg~~~y~G~~ 1076 (1436)
+ |+++..|..
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 7 689999975
No 469
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-33 Score=314.89 Aligned_cols=208 Identities=22% Similarity=0.297 Sum_probs=164.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCc-----cccceEEEecCCCCc
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLH 239 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1436)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 359999999999999999999999999999999999987631 1379999999887531 123569999999988
Q ss_pred CCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc----cccc
Q 046196 240 IGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE----VCAD 315 (1436)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 315 (1436)
++.+||+||+.++....+... .+ + .....+.+++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-~~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-RD---H-----------------------------LMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-HH---H-----------------------------HHHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987643221100 00 0 001122344455442 2334
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcc
Q 046196 316 TMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFD 395 (1436)
Q Consensus 316 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 395 (1436)
+. ++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.+ + ++++.++|+..++.+.+|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 33 456999999999999999999999999999999999999999999998742 3 666778899989999999
Q ss_pred cEEEecCCeEEEecChhHHH
Q 046196 396 DLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 396 ~iivL~~G~iv~~G~~~~~~ 415 (1436)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 470
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.2e-33 Score=310.13 Aligned_cols=197 Identities=27% Similarity=0.376 Sum_probs=163.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|++..+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56777776542 2358999999999999999999999999999999999876 56899999998753
Q ss_pred cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046196 919 QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKR 998 (1436)
Q Consensus 919 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqR 998 (1436)
....++.++|++|++.+++.+||.|++.+....+. .. .+.++++++.+++.+..+.. ++.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHH
Confidence 22245678999998888889999999987543321 11 12368899999998765554 35799999999
Q ss_pred HHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEe
Q 046196 999 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMK 1065 (1436)
Q Consensus 999 l~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1065 (1436)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998777999999999975 343 3 8887774
No 471
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.7e-33 Score=315.80 Aligned_cols=220 Identities=23% Similarity=0.292 Sum_probs=173.8
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.+. ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478888887652 2359999999999999999999999999999999999731125789999999876
Q ss_pred Ccc---cccc-eEEEeecCCCCCCCCcHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046196 918 NQE---TFAR-ISGYCEQTDIHSPHVTVYESLVYSAWLRLP----PEVDSDTRKMFVEEVMELVELN-PIREALVGLPGV 988 (1436)
Q Consensus 918 ~~~---~~~~-~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~----~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~ 988 (1436)
... ...+ .++|++|++.+++.+|+.+++.+....... ......+..+.++++++.+++. ...+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998765432110 0111222335577889999986 34444321
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hCeEEEEecC
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDA-FDELLLMKRG 1067 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~G 1067 (1436)
.+||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 259999999999999999999999999999999999999999999998877999999999976 34444 799999985
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999875
No 472
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.9e-33 Score=278.70 Aligned_cols=202 Identities=25% Similarity=0.346 Sum_probs=171.7
Q ss_pred CCCCcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc-------cceEEEec
Q 046196 162 SRKKPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP-------QRTSAYIS 234 (1436)
Q Consensus 162 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 234 (1436)
....+.+||++|++.|++||.++|+|||||||||||-+|+|+-+|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3445678999999999999999999999999999999999999998 9999999998865542 36799999
Q ss_pred CCCCcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccc
Q 046196 235 QNDLHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCA 314 (1436)
Q Consensus 235 Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 314 (1436)
|...++|+||-.||+....+++|-..+ +........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999988777652211 0112234568999998766
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhc
Q 046196 315 DTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELF 394 (1436)
Q Consensus 315 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 394 (1436)
+ .++..|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+. .+++++.++|+. ....-|
T Consensus 141 ~-----HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc 213 (228)
T COG4181 141 T-----HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARC 213 (228)
T ss_pred c-----cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhh
Confidence 5 456679999999999999999999999999999999999999999999988764 567777777774 677889
Q ss_pred ccEEEecCCeEEE
Q 046196 395 DDLILLSDGQIVY 407 (1436)
Q Consensus 395 D~iivL~~G~iv~ 407 (1436)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 473
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=315.14 Aligned_cols=211 Identities=21% Similarity=0.303 Sum_probs=164.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCC-c---cccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEE-F---VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~~~~~ 240 (1436)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 35899999999999999999999999999999999998752 0138999999987642 1 1235699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.++....+.... . .....++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~---------~------------------------~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK---------K------------------------VLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch---------H------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 8999999886432211000 0 00112334566666643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..+..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+ + ++|+.++|+..++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999753 3 56666888888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 218 LMGELVEHDDTQVIF 232 (249)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 474
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=317.51 Aligned_cols=211 Identities=27% Similarity=0.354 Sum_probs=167.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCcc----ccceEEEecCCCCcC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEFV----PQRTSAYISQNDLHI 240 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~ 240 (1436)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|. ...+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 35999999999999999999999999999999999998751 013899999998875431 245799999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ +||+||+.++.+...... .. +....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP---------RK------------------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC---------HH------------------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 899999988643211000 00 00112345677888865332222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 56667889999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-33 Score=314.91 Aligned_cols=210 Identities=21% Similarity=0.355 Sum_probs=164.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--KDLKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111389999999876431 1235699999998777
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.++....+.... + .....++.+++.+||........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999886432211000 0 00112345677778742110011 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.+..||||||||++||||++.+|++++|||||+|||+.+...+.+.|+++.+ +++|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECCHHHHHhhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999998743 356777889998999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 476
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=350.08 Aligned_cols=205 Identities=26% Similarity=0.340 Sum_probs=172.7
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcc----cccceEEEeecCCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQE----TFARISGYCEQTDIHSPHV 939 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~~l 939 (1436)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 5699999999876421 2345699999998888999
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 046196 940 TVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1019 (1436)
Q Consensus 940 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTs 1019 (1436)
||+||+.+..........+.++..+.++++++.+++.+..+.. +..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211010112233345688999999998766665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCCC
Q 046196 1020 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPLG 1077 (1436)
Q Consensus 1020 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~~ 1077 (1436)
|||+.+...+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+..
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 219 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLA 219 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChh
Confidence 99999999999999999878999999999976 56778999999996 7899998764
No 477
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.89 Aligned_cols=210 Identities=19% Similarity=0.252 Sum_probs=165.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDL--KFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 48999999999999999999999999999999999998751 1259999999877432 1245799999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+. ||+||+.++....+.... + .....++.+++.+||.+...... +
T Consensus 98 ~~-tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTAQ-----S----------------------------RLDEVVEKSLRQAALWDEVKDNL-H 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCChh-----h----------------------------HHHHHHHHHHHHhCCchhhhhHh-h
Confidence 75 999999987543221000 0 00012234456666643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. . +.+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--Q-NYTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 2 456777899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999988774
No 478
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-33 Score=316.85 Aligned_cols=213 Identities=28% Similarity=0.389 Sum_probs=169.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-----CCcceEEEECCccCCCccc---cceEEEecCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD-----LKFSGRVTYNGHGMEEFVP---QRTSAYISQNDL 238 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~ 238 (1436)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 35999999999999999999999999999999999999874 1127999999988754322 345899999987
Q ss_pred cCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccc
Q 046196 239 HIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMV 318 (1436)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 318 (1436)
.++.+||+||+.++..... .... ... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~--~~~~---~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHA--RRAG---ALT-------------------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhcccccc--cccc---cCC-------------------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 6777999999988532100 0000 000 001123456788999986655444
Q ss_pred cCcccccCChhhhhHHHHHHHHh---------cCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchh
Q 046196 319 GDEMLRGISGGQRKRLTTGEMLV---------GPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPE 389 (1436)
Q Consensus 319 g~~~~~~LSGGqkqRvsia~al~---------~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 389 (1436)
..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+. .+++|+.++|+..+
T Consensus 144 -----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tviiisH~~~~ 217 (272)
T PRK13547 144 -----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WNLGVLAIVHDPNL 217 (272)
T ss_pred -----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHH
Confidence 469999999999999999 599999999999999999999999999997653 24566668898888
Q ss_pred HHHhcccEEEecCCeEEEecChhHHH
Q 046196 390 TYELFDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 390 ~~~~~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 98999999999999999999988763
No 479
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=318.69 Aligned_cols=218 Identities=20% Similarity=0.231 Sum_probs=172.5
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899887653 235899999999999999999999999999999999975421 3689999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKN-----QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~-----~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++. ....++.++|++|+..+++ .|+.||+.+....+. .. .+..+.++++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567999999988777 499999987653321 11 1223445677787777431111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec---
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR--- 1066 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~--- 1066 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999875 589999999986 58889999999982
Q ss_pred -----CcEEEEEcCC
Q 046196 1067 -----GGEEIYVGPL 1076 (1436)
Q Consensus 1067 -----Gg~~~y~G~~ 1076 (1436)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4789999874
No 480
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.2e-33 Score=313.69 Aligned_cols=209 Identities=27% Similarity=0.413 Sum_probs=166.6
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.+. ..++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-----------~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYP-----------NQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcC-----------CCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 56777766542 112459999999999999999999999999999999999876 56899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 046196 919 Q---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVG------LPGVS 989 (1436)
Q Consensus 919 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g------~~~~~ 989 (1436)
. ...++.++|++|+..+++ .||.|++.+... ... .+.++++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223457999999988776 699999975321 111 1235677888888776655321 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|+++ ..+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999976 3478999999996 67
Q ss_pred EEEEc
Q 046196 1070 EIYVG 1074 (1436)
Q Consensus 1070 ~~y~G 1074 (1436)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 76654
No 481
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=317.43 Aligned_cols=210 Identities=20% Similarity=0.303 Sum_probs=165.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|++|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5899999999999999999999999999999999998741 01389999999887531 1245799999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+. ||+||+.++....+... + . .....++.+++.+|+.+...+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~-------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R-------R------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H-------H------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 99999988654322100 0 0 00112344567777753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+.++.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ + .+++.++|+..++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999853 3 45666889888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|++++.|+++++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 482
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=6.1e-33 Score=316.61 Aligned_cols=203 Identities=25% Similarity=0.281 Sum_probs=166.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC----CCCcceEEEECCccCCCccc-cceEEEecCCCC--cC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGK----DLKFSGRVTYNGHGMEEFVP-QRTSAYISQNDL--HI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~--~~ 240 (1436)
++|+|+|+++++||+++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~ 93 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFN 93 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccC
Confidence 489999999999999999999999999999999999988 5 8999999988754322 256999999974 34
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcc---ccccc
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEV---CADTM 317 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~ 317 (1436)
+..|+.+++.+.++..+.. . ....++.+++.+||.+ ..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~~~~~~- 136 (254)
T PRK10418 94 PLHTMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAARVLKL- 136 (254)
T ss_pred ccccHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChhhhhhc-
Confidence 5679999987643221100 0 0023456788899875 2343
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccE
Q 046196 318 VGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDL 397 (1436)
Q Consensus 318 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 397 (1436)
.+..|||||||||+|||||+.+|++|||||||+|||..++..+.+.|+++++. .+++|+.++|+..++.+.+|++
T Consensus 137 ----~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v 211 (254)
T PRK10418 137 ----YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDV 211 (254)
T ss_pred ----CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEE
Confidence 34569999999999999999999999999999999999999999999998653 3566777889998999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 046196 398 ILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 398 ivL~~G~iv~~G~~~~~~ 415 (1436)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 212 AVMSHGRIVEQGDVETLF 229 (254)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999988774
No 483
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=318.85 Aligned_cols=195 Identities=26% Similarity=0.336 Sum_probs=155.8
Q ss_pred cccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCcH
Q 046196 865 EFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 865 ~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|+..+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 58999999999999999999999999999999999986 579999999987532 234567999999988776 699
Q ss_pred HHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 046196 942 YESLVYSAWLRLPPEVDSDTRK-----MFVEEVMELV--ELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1014 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~-----~~v~~vl~~l--~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illl 1014 (1436)
+||+.+.... ....... ..+++.++.+ ++.+..+.. +..||+|||||++||++|+.+|++++|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999764321 1111110 1123444444 444333332 568999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1015 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1015 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
||||+|||+.+...+.+.|+++.+ |.|||+++|+++ ++. .+|++++|++ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~-~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TIE-NADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HHh-hCCEEEEecC-CeEeeeCCH
Confidence 999999999999999999999864 899999999986 454 5999999997 678888764
No 484
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.6e-33 Score=319.46 Aligned_cols=210 Identities=20% Similarity=0.295 Sum_probs=171.1
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|+++.++. +...+|+|+|++|++||+++|+|+||||||||+++|+|..+ .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3778998877631 12358999999999999999999999999999999999875 479999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 046196 918 NQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGL------PGV 988 (1436)
Q Consensus 918 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~------~~~ 988 (1436)
.. ..+++.++|++|++.+++ .|++||+.... .... +.+.+.++.++|.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345667999999998887 49999996321 1111 2356778888987665554321 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCc
Q 046196 989 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGG 1068 (1436)
Q Consensus 989 ~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1068 (1436)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999975 34 45999999986 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 89999975
No 485
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-33 Score=359.94 Aligned_cols=210 Identities=24% Similarity=0.379 Sum_probs=172.9
Q ss_pred ceeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCcc
Q 046196 837 HSITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYP 916 (1436)
Q Consensus 837 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 916 (1436)
..++|+|+++.+. +++.+|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986432 1245899999999999999999999999999999999987 4 48999999988
Q ss_pred CCc---ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 046196 917 KNQ---ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNP-------IREALVGLP 986 (1436)
Q Consensus 917 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~~ 986 (1436)
+.. ..+++.++||+|++.++. .|++||+.++. | +.+.+ .++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~----~-~~~~e----ei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN----P-DASDE----QLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC----C-CCCHH----HHHHHHHHhCHHHHHHhcccccccccccC
Confidence 643 456788999999998876 59999998752 2 23332 2455566555543 235666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEec
Q 046196 987 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKR 1066 (1436)
Q Consensus 987 ~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1066 (1436)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|+|++|++
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 46799999999999999999999999999999999999999999999875 5899999999974 5678999999986
Q ss_pred CcEEEEEcCC
Q 046196 1067 GGEEIYVGPL 1076 (1436)
Q Consensus 1067 Gg~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 789988874
No 486
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=314.08 Aligned_cols=210 Identities=21% Similarity=0.286 Sum_probs=164.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCcceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKD--LKFSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 5899999999999999999999999999999999987531 11379999999987542 1135699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ .||+||+.|+.+..+.... ......++.+++.++|.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999987543211000 000112334566677643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
+..+.||||||||++|||+++.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998753 3 56666889988999999999999
Q ss_pred cCCeEEEecChhHHH
Q 046196 401 SDGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~~G~iv~~G~~~~~~ 415 (1436)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999988764
No 487
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-33 Score=319.03 Aligned_cols=196 Identities=30% Similarity=0.412 Sum_probs=154.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc---ccccceEEEeecCCCCCCCCc
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ---ETFARISGYCEQTDIHSPHVT 940 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lT 940 (1436)
+.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 458999999999999999999999999999999999976 569999999987532 223456999999987776 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 046196 941 VYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREAL-------VGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1013 (1436)
Q Consensus 941 v~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~-------~g~~~~~~LSgGqrqRl~iA~aL~~~p~ill 1013 (1436)
|+|++.+.... ...+ ..++.++..++.+..+.+ .. ..+..||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764211 1111 122333333332221111 11 1246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1014 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1014 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++ +.+|++++|++ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7899999999976 34 47999999997 688888874
No 488
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=315.54 Aligned_cols=217 Identities=24% Similarity=0.305 Sum_probs=172.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeE------EEE
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSG------SIT 911 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G------~i~ 911 (1436)
.+.++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+| ++.
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~--~~~G~v~~~G~~~ 74 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIE--IYDSKIKVDGKVL 74 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCcCceeEcCEEE
Confidence 477888876652 3468999999999999999999999999999999999876 3454 455
Q ss_pred ECCccCC---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCC
Q 046196 912 ISGYPKN---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIR-EALVGLPG 987 (1436)
Q Consensus 912 i~g~~~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~ 987 (1436)
++|.+.. ....++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+.. +.... .
T Consensus 75 ~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~ 150 (257)
T PRK14246 75 YFGKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNS--P 150 (257)
T ss_pred ECCcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcC--C
Confidence 5555442 12345679999999999999999999988643321 112234445678899999986421 11111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+..||+|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+...+|++++|++
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999999865 699999999976 46688999999985
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 788888874
No 489
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.1e-33 Score=313.66 Aligned_cols=206 Identities=28% Similarity=0.432 Sum_probs=159.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCccc---cceEEEecCCCCcCCCC
Q 046196 167 LTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVP---QRTSAYISQNDLHIGEM 243 (1436)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 243 (1436)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 35899999999999999999999999999999999999987 9999999987654322 35699999998765 57
Q ss_pred CHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHh--CCcccccccccCc
Q 046196 244 TVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKIL--GLEVCADTMVGDE 321 (1436)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 321 (1436)
||+||+.+... . ...+...+ +... ...+..++.+ |++...+ +
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~---------------------~~~~------~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIE---------------------AAKL------AGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHH---------------------HHHH------cCcHHHHHhCcccccchhh-----c
Confidence 99999987532 1 00000000 0000 0012234444 4443333 3
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.+..|||||||||+||||++.+|++++|||||+|||+.+...+.+.|+++. . +.+|+.++|+..++ ..+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--A-GRTVIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--C-CCEEEEEeCCHHHH-HhCCEEEEEE
Confidence 445799999999999999999999999999999999999999999999874 2 45566677887777 5699999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|++++.|+++++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999888754
No 490
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-34 Score=290.72 Aligned_cols=211 Identities=27% Similarity=0.376 Sum_probs=181.4
Q ss_pred CcceeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCC
Q 046196 165 KPLTILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIG 241 (1436)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~ 241 (1436)
.++.+|+|+|+.|++|.+|+++|||||||||||.+++++++.+ +|+|+++|.++.....+ +..+..-|+...-.
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~ 88 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINS 88 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhh
Confidence 4467999999999999999999999999999999999999998 99999999998776543 55677889888888
Q ss_pred CCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 046196 242 EMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDE 321 (1436)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 321 (1436)
.+||||-+.||.--..-|. + ..++...++..++-|+|++..|..+
T Consensus 89 rlTV~dLv~FGRfPYSqGR------------------l--------------t~eD~~~I~~aieyl~L~~l~dryL--- 133 (252)
T COG4604 89 RLTVRDLVGFGRFPYSQGR------------------L--------------TKEDRRIINEAIEYLHLEDLSDRYL--- 133 (252)
T ss_pred eeEHHHHhhcCCCcccCCC------------------C--------------chHHHHHHHHHHHHhcccchHHHhH---
Confidence 9999999999842211110 0 1123346777899999998877554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEec
Q 046196 322 MLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLS 401 (1436)
Q Consensus 322 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~ 401 (1436)
.+||||||||.-||..++++.+.++||||.+.||...+.++++.|+++++..++|+|+ +.|+...+-.++|+|+-|+
T Consensus 134 --d~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~IVAlK 210 (252)
T COG4604 134 --DELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHIVALK 210 (252)
T ss_pred --HhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhheeeec
Confidence 5699999999999999999999999999999999999999999999999988777666 6788999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 046196 402 DGQIVYQGPRENVLE 416 (1436)
Q Consensus 402 ~G~iv~~G~~~~~~~ 416 (1436)
+|+++.+|+++|+.+
T Consensus 211 ~G~vv~~G~~~eii~ 225 (252)
T COG4604 211 NGKVVKQGSPDEIIQ 225 (252)
T ss_pred CCEEEecCCHHHhcC
Confidence 999999999999864
No 491
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-33 Score=307.71 Aligned_cols=192 Identities=27% Similarity=0.404 Sum_probs=160.3
Q ss_pred cceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcc-------ccceEEEecCCCCcCCCCC
Q 046196 172 DVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFV-------PQRTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~lT 244 (1436)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998764211 1356999999998888999
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+||+.+..... . .. .....++.+++.+||++..++.+ +
T Consensus 92 ~~~~l~~~~~~~---~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R---------NR------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C---------HH------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998763210 0 00 00123456788999986665444 4
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEecCCe
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILLSDGQ 404 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL~~G~ 404 (1436)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.+++++.. .+++++.++|+..++.+.+|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998653 25567778899999999999999999999
Q ss_pred EEEec
Q 046196 405 IVYQG 409 (1436)
Q Consensus 405 iv~~G 409 (1436)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98876
No 492
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=302.35 Aligned_cols=159 Identities=32% Similarity=0.450 Sum_probs=142.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc-----ccccceEEEeecCCCCCCC
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ-----ETFARISGYCEQTDIHSPH 938 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~ 938 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 358999999999999999999999999999999999876 569999999987642 2345679999999888888
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 046196 939 VTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1018 (1436)
Q Consensus 939 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPT 1018 (1436)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999987531 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 1019 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 1019 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999877 899999999975 466689999999874
No 493
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-33 Score=314.87 Aligned_cols=219 Identities=24% Similarity=0.300 Sum_probs=174.2
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCC---ceeEEEEECC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YVSGSITISG 914 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 914 (1436)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..... +.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367788876652 245999999999999999999999999999999999975311 3689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046196 915 YPKNQ-----ETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVS 989 (1436)
Q Consensus 915 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 989 (1436)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+...+.+.+.++.+++.+....... ..+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87642 1345679999999888875 99999987643221 11223334567888888888542211111 1256
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcE
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGE 1069 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1069 (1436)
.||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 8999999999999999999999999999999999999999999999854 899999999986 57888999999986 78
Q ss_pred EEEEcCC
Q 046196 1070 EIYVGPL 1076 (1436)
Q Consensus 1070 ~~y~G~~ 1076 (1436)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9998874
No 494
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=313.81 Aligned_cols=193 Identities=19% Similarity=0.264 Sum_probs=163.7
Q ss_pred ccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCcccccceEEEeecCCCCCCCCcH
Q 046196 862 DRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 862 ~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
..+.+|+|+|++|+|||+++|+||||||||||+++|+|..+ +.+|+|.++|. ++++.|...+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 34579999999999999999999999999999999999987 56899999984 3566777767788999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
.||+.+..... ..+.++..+.++++++.+++.+..+.. ++.||||||||++||++|+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 122344445567888888887766654 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecCcEEEEEcCC
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRGGEEIYVGPL 1076 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~y~G~~ 1076 (1436)
|+.+...+.+.|+++.+.|+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~ 227 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGEL 227 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCH
Confidence 999999999999998777999999999975 56778999999985 788888875
No 495
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1e-32 Score=314.07 Aligned_cols=219 Identities=24% Similarity=0.296 Sum_probs=169.1
Q ss_pred eEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCC
Q 046196 839 ITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKN 918 (1436)
Q Consensus 839 i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 918 (1436)
++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.++.
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56777776652 23589999999999999999999999999999999998421157899999998763
Q ss_pred cc---c-ccceEEEeecCCCCCCCCcHHHHHHHHHH-hcC--CC-CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046196 919 QE---T-FARISGYCEQTDIHSPHVTVYESLVYSAW-LRL--PP-EVDSDTRKMFVEEVMELVELN-PIREALVGLPGVS 989 (1436)
Q Consensus 919 ~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~~~~~-l~~--~~-~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~ 989 (1436)
.. . .++.++|++|++.+++.+|+.+++.+... ++. .. ........+.+++.++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 22468999999888888887776643211 110 00 011122345677888888884 3344332 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hCeEEEEecCc
Q 046196 990 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDA-FDELLLMKRGG 1068 (1436)
Q Consensus 990 ~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~Gg 1068 (1436)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||++||++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999976 34444 899999985 7
Q ss_pred EEEEEcCC
Q 046196 1069 EEIYVGPL 1076 (1436)
Q Consensus 1069 ~~~y~G~~ 1076 (1436)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 88999875
No 496
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-33 Score=327.88 Aligned_cols=211 Identities=24% Similarity=0.384 Sum_probs=176.7
Q ss_pred eeEEecccceeecchhhhccCCCCccccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccC
Q 046196 838 SITFDDIRYALDMPQEMKAQGIPDDRLEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPK 917 (1436)
Q Consensus 838 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 917 (1436)
.++++|++++++. ...++|+|+|+++++||.+||+|+||||||||+..|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6899999998853 23469999999999999999999999999999999999887 5799999999886
Q ss_pred C---cccccceEEEeecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCC
Q 046196 918 N---QETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREAL-------VGLPG 987 (1436)
Q Consensus 918 ~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~-------~g~~~ 987 (1436)
. ...+++.+++++|...++ .-|+++||..+. | +.+++ .+.++++.+||.+..... +|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~----~-~AsDE----el~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN----P-DASDE----ELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC----C-CCCHH----HHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 4 334566789999976655 569999997643 2 23332 257788888988765433 443 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEEEecC
Q 046196 988 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKRG 1067 (1436)
Q Consensus 988 ~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1067 (1436)
++.||||||||++|||+|++|.++++|||||.|||+.+.+++++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 678999999999999999999999999999999999999999999998664 899999999965 5688999999996
Q ss_pred cEEEEEcCC
Q 046196 1068 GEEIYVGPL 1076 (1436)
Q Consensus 1068 g~~~y~G~~ 1076 (1436)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 799998864
No 497
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=4.6e-33 Score=305.67 Aligned_cols=183 Identities=25% Similarity=0.322 Sum_probs=153.9
Q ss_pred ccccccceEEEeCCeEEEEEccCCCChhHHHHhHcCCCCCCceeEEEEECCccCCc--ccccceEEEeecCCCCCCCCcH
Q 046196 864 LEFLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVSGSITISGYPKNQ--ETFARISGYCEQTDIHSPHVTV 941 (1436)
Q Consensus 864 ~~iL~~vs~~i~~Ge~~ai~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 941 (1436)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (198)
T TIGR01189 13 RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELSA 90 (198)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCcH
Confidence 459999999999999999999999999999999999876 568999999987532 2234678999999888888999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 046196 942 YESLVYSAWLRLPPEVDSDTRKMFVEEVMELVELNPIREALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1021 (1436)
Q Consensus 942 ~e~l~~~~~l~~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~p~illlDEPTsgL 1021 (1436)
.|++.+....+. . + .+.++++++.+++.+..++. +..||||||||++||++|+.+|++++|||||+||
T Consensus 91 ~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 158 (198)
T TIGR01189 91 LENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLP-----AAQLSAGQQRRLALARLWLSRAPLWILDEPTTAL 158 (198)
T ss_pred HHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987643321 1 1 23468889999998776655 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhCeEEE
Q 046196 1022 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLL 1063 (1436)
Q Consensus 1022 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1063 (1436)
|+.++..+++.|++++++|.|||+++|++. ++ .+++++.
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 159 DKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 999999999999998777999999999975 22 3466553
No 498
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=322.67 Aligned_cols=203 Identities=19% Similarity=0.330 Sum_probs=162.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--C---CCCcceEEEECCccCCCc-----cccceEEEecCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLG--K---DLKFSGRVTYNGHGMEEF-----VPQRTSAYISQND 237 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~---~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~ 237 (1436)
.+|+|+|++|++|++++|+||||||||||+++|+|..+ | + +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 59999999999999999999999999999999999864 3 5 89999999876432 1235799999998
Q ss_pred CcCCCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCc----cc
Q 046196 238 LHIGEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLE----VC 313 (1436)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 313 (1436)
.+++ .||+||+.++.+..+.... ......+..+++.+|+. +.
T Consensus 130 ~l~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFP-KSIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCc-cCHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhhH
Confidence 8776 4999999986433211000 00011233456677763 22
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHh
Q 046196 314 ADTMVGDEMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYEL 393 (1436)
Q Consensus 314 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 393 (1436)
.+ +.+..|||||||||+|||||+.+|++|||||||+|||+.+...+.+.|+++.. +.+|+.++|+..++.++
T Consensus 176 ~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~ 247 (286)
T PRK14275 176 LD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRV 247 (286)
T ss_pred hh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHh
Confidence 33 33457999999999999999999999999999999999999999999998753 35677788999999999
Q ss_pred cccEEEecCCeEEEecChhHHH
Q 046196 394 FDDLILLSDGQIVYQGPRENVL 415 (1436)
Q Consensus 394 ~D~iivL~~G~iv~~G~~~~~~ 415 (1436)
+|++++|++|+++..|+++++.
T Consensus 248 ~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 248 SDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988774
No 499
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.6e-33 Score=353.35 Aligned_cols=177 Identities=29% Similarity=0.444 Sum_probs=144.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcceEEEECCccCCCcccc---ceEEEecCCCCcCCCCC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLKFSGRVTYNGHGMEEFVPQ---RTSAYISQNDLHIGEMT 244 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~lT 244 (1436)
++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++. .. +.++||+|++.+| +.|
T Consensus 349 ~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~---~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF-~~T 423 (529)
T TIGR02868 349 PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL---QGEVTLDGVSVSSL-QDELRRRISVFAQDAHLF-DTT 423 (529)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEhhhH-HHHHHhheEEEccCcccc-ccc
Confidence 3899999999999999999999999999999999999998 99999999998877 53 5799999999866 559
Q ss_pred HHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 046196 245 VRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGDEMLR 324 (1436)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 324 (1436)
|+|||.++. |+.+.+++.++++..+.++. ...|+++.||.||+++.
T Consensus 424 I~eNI~~g~-------------------------~~~~~e~i~~al~~a~l~~~--------i~~lp~GldT~ige~G~- 469 (529)
T TIGR02868 424 VRDNLRLGR-------------------------PDATDEELWAALERVGLADW--------LRSLPDGLDTVLGEGGA- 469 (529)
T ss_pred HHHHHhccC-------------------------CCCCHHHHHHHHHHcCCHHH--------HHhCcccccchhccccC-
Confidence 999999862 12222334444443333221 23478899999998665
Q ss_pred cCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecC
Q 046196 325 GISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQP 386 (1436)
Q Consensus 325 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~ 386 (1436)
+||||||||++||||++++|+||+||||||+||+.++..|.+.+++.. +++|++.++|.
T Consensus 470 ~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~---~~~TvIiItHr 528 (529)
T TIGR02868 470 RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL---SGKTVVVITHH 528 (529)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc---CCCEEEEEecC
Confidence 699999999999999999999999999999999999999999999752 23444446664
No 500
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=314.27 Aligned_cols=210 Identities=20% Similarity=0.268 Sum_probs=164.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCC--cceEEEECCccCCCc-----cccceEEEecCCCCcC
Q 046196 168 TILHDVSGIIKPQRLTLLLGPPSSGKTTLLLALAGKLGKDLK--FSGRVTYNGHGMEEF-----VPQRTSAYISQNDLHI 240 (1436)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~--~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1436)
++|+|+|+++++||+++|+|+||||||||+++|+|.++++.. .+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 489999999999999999999999999999999999875311 389999999887431 1234699999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCchhhhhhhhHHHHHccCCCCCcHHHHHHHhhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 046196 241 GEMTVRETLAFSARCQGVGPRYEVLQELSRREKAANIKPDPDIDLIMKAASLEGQEKNVVTDYVLKILGLEVCADTMVGD 320 (1436)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 320 (1436)
+ +||+||+.++....+... + ......++.+++.+|+.+..... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~-------------------~--------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLP-------------------Q--------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCC-------------------H--------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 6 899999988643221000 0 00011234456777763211101 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCceeEEeCCCCCCChHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHHhcccEEEe
Q 046196 321 EMLRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQSIHILNGTAVISLLQPAPETYELFDDLILL 400 (1436)
Q Consensus 321 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~iivL 400 (1436)
..+..|||||||||+|||||+.+|++++|||||+|||+.+..++.+.|+++.. + .+|+.++|+.+++.+++|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 56677889999999999999999
Q ss_pred c-----CCeEEEecChhHHH
Q 046196 401 S-----DGQIVYQGPRENVL 415 (1436)
Q Consensus 401 ~-----~G~iv~~G~~~~~~ 415 (1436)
+ +|+++++|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 8 59999999999874
Done!