BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046197
(395 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 160/388 (41%), Gaps = 37/388 (9%)
Query: 29 KGRRRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXX 88
K +G KN PP P P+IGH+ + H L +S+QYG +
Sbjct: 4 KTSSKGLKN-PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGL 62
Query: 89 EAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVN 148
+ ++ + F RP + IS + G W RR L+ N +
Sbjct: 63 DTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRR------LAQNGLK 116
Query: 149 VFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSEL----------------TINVMM 192
FS I D L + S++ ++V + TL EL NV+
Sbjct: 117 SFS-IASDPASSTSCYLEEHVSKE--AEVLISTL-QELMAGPGHFNPYRYVVVSVTNVIC 172
Query: 193 RIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVK-I 251
I G+RY D ++ GE + G+ NP D +P+L ++ N K +
Sbjct: 173 AICFGRRY--DHNHQELLSLVNLNNNFGE---VVGSGNPADFIPILRYLPNPSLNAFKDL 227
Query: 252 SKRMDEFFQRLVDE--RRNKKEACLENTDSMIDHLLSLQHSEPH--YYTDQTIKGLAMTM 307
+++ F Q++V E + +K + TDS+I+H Q E +D+ I + + +
Sbjct: 228 NEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDL 287
Query: 308 LLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISE 367
AG DT + W++ LV +P V +K ELDT +G+ D S L Y+ I E
Sbjct: 288 FGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILE 347
Query: 368 TLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
T R P +PH ++ D + GF +P
Sbjct: 348 TFRHSSFVPFTIPHSTTRDTSLKGFYIP 375
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 148/380 (38%), Gaps = 31/380 (8%)
Query: 33 RGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQ 92
+G K+ PP P P++GH+ + H L +S++YG + + +
Sbjct: 13 KGLKS-PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIR 71
Query: 93 ECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSP 152
+ + F RP + I+ + G W RR L+ N +N FS
Sbjct: 72 QALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRR------LAQNALNTFS- 124
Query: 153 IRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELT--------------INVMMRIVAGK 198
I D S+ Y + SK E K L S L + V + V G
Sbjct: 125 IASDPASS-----SSCYLEEHVSK-EAKALISRLQELMAGPGHFDPYNQVVVSVANVIGA 178
Query: 199 RYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYE-KRIVKISKRMDE 257
FG E +E + E + + NP D P+L ++ N +R ++R
Sbjct: 179 MCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLW 238
Query: 258 FFQRLVDERRNK--KEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTT 315
F Q+ V E K + + T ++ H + + + I L + AG DT
Sbjct: 239 FLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTV 298
Query: 316 AVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTA 375
+ W++ LV P++ +K ELDT +G++ D +L YL I ET R
Sbjct: 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFL 358
Query: 376 PLLVPHRSSDDCVVGGFDVP 395
P +PH ++ D + GF +P
Sbjct: 359 PFTIPHSTTRDTTLNGFYIP 378
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 28/365 (7%)
Query: 42 PPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFTKNDVV 101
PP +P G LHL++P L +L+++ GP+ +E + V
Sbjct: 31 PPLVP--GFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVD 88
Query: 102 FANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRL 161
FA RP+ S K +S + Y W+ +++T +L R ++ + +L
Sbjct: 89 FAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSM-----EPWVDQL 143
Query: 162 LKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGE 221
++ Q + V ++ FS LT +++ + G + +D L F + V +
Sbjct: 144 TQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK---EDTL-----VHAFHDCVQD 195
Query: 222 AFAL--SGTSNPGDHLPMLNWISNYE-KRIVKISKRMDEFFQRLVDERRNKKEACLENTD 278
+ D +P L + N R+ + + D ++ + RR+K+
Sbjct: 196 LMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQL--RRHKESMVAGQWR 253
Query: 279 SMIDHLL---SLQHSE--PHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVL 333
M D++L Q E P + + + + + GT+TTA T+ WA++ L++HP++
Sbjct: 254 DMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQ 313
Query: 334 QKATAELDTHVGQQHLFDE---PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVG 390
++ ELD +G D ++L L+ I+E LRL P PL +PHR++ +
Sbjct: 314 RRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF 373
Query: 391 GFDVP 395
G+D+P
Sbjct: 374 GYDIP 378
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y V G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWLFKGYG--VAFSNGERAKQLRRFSIATLRGFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + + ++ S NV+ IV G R+ ED+E
Sbjct: 129 -EEAGFLIDALRGTHG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYEDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G +F + TS G M + + + +++ K + +++F + V+ N++
Sbjct: 180 LRMMLG-SFQFTATST-GQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L AGT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y +I E R P+ + HR + D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 154/369 (41%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y + G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSN--GERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + ++ S NV+ IV G R+ +D+E
Sbjct: 129 -EEAGFLIDALRGTGG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYKDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G +F + TS G M + + + +++ ++ + +++F + V+ N++
Sbjct: 180 LRMMLG-SFQFTSTST-GQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L AGT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y+ +I E R P+ + R D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 152/377 (40%), Gaps = 24/377 (6%)
Query: 29 KGRRRGYKNLPPSPPCMPVIGH-LHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXX 87
K G LPP P +PVIG+ L + + L NLSK YGP+
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHG 62
Query: 88 XEAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRV 147
EA +E F+ R + + + + G +W+ +RR + +++
Sbjct: 63 YEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSN--GKKWKEIRRFS---LMTLRNF 117
Query: 148 NVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLE 207
+ D ++ + L + + S + + NV+ I+ KR+ D
Sbjct: 118 GMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKD--- 174
Query: 208 DEEEAGRFKEIVGEAFALSGTSNP-----GDHLPMLNWISNYEKRIVKISKRMDEFFQRL 262
++ E + E + S+P + P++++ +++K M +
Sbjct: 175 --QQFLNLMEKLNENIKI--LSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEK 230
Query: 263 VDERRNKKEACLENTDSMIDHLL----SLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVT 318
V E + + + N ID L +H++P +T ++++ A+ + AGT+TT+ T
Sbjct: 231 VKEHQESMD--MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTT 288
Query: 319 MEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLL 378
+ +A+ L+ HP+V K E++ +G+ D S + Y ++ E R P
Sbjct: 289 LRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS 348
Query: 379 VPHRSSDDCVVGGFDVP 395
+PH + D + +P
Sbjct: 349 LPHAVTCDIKFRNYLIP 365
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 150/373 (40%), Gaps = 18/373 (4%)
Query: 30 GRRRGYKNLPPSPPCMPVIGH-LHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXX 88
++ K PP P +PVIG+ L + + L NLSK YGP+
Sbjct: 2 AKKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGY 61
Query: 89 EAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVN 148
EA +E F+ R + + + + G +W+ +RR + +++
Sbjct: 62 EAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSN--GKKWKEIRRFS---LMTLRNFG 116
Query: 149 VFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDD--VL 206
+ D ++ + L + + S + + NV+ I+ KR+ D L
Sbjct: 117 MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFL 176
Query: 207 EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDER 266
E+ EI+ + + P +L++ +++K M + V E
Sbjct: 177 NLMEKLNENIEILSSPWIQVYNNFPA----LLDYFPGTHNKLLKNVAFMKSYILEKVKEH 232
Query: 267 RNKKEACLENTDSMIDHLL----SLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWA 322
+ + + N ID L +H++P +T ++++ A+ + AGT+TT+ T+ +A
Sbjct: 233 QESMD--MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYA 290
Query: 323 MSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHR 382
+ L+ HP+V K E++ +G+ D S + Y ++ E R P +PH
Sbjct: 291 LLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHA 350
Query: 383 SSDDCVVGGFDVP 395
+ D + +P
Sbjct: 351 VTCDIKFRNYLIP 363
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 158/385 (41%), Gaps = 38/385 (9%)
Query: 30 GRRRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYN----LSKQYGPIXXXXXXXXXXXXX 85
++ G K P S +P++G L + P H ++N L K+YGPI
Sbjct: 2 AKKTGAK-YPKSLLSLPLVGSLPFL--PRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIV 58
Query: 86 XXXEAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRIT-AIEVLSS 144
+ A+E K F+ RP+ + S N + A G W+ RR+ A L
Sbjct: 59 GHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFK 118
Query: 145 NRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDD 204
+ I EI L L+ + + +++ NV+ I Y D
Sbjct: 119 DGDQKLEKIICQEISTLCDMLATHNGQS----IDISFPVFVAVTNVISLICFNTSYKNGD 174
Query: 205 ----VLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRM-DEFF 259
V+++ E G + ++ D +P L N +K ++ ++
Sbjct: 175 PELNVIQNYNE-GIIDNLSKDSLV--------DLVPWLKIFPNKTLEKLKSHVKIRNDLL 225
Query: 260 QRLVDERRNKKEACLENTDSMIDHLLSLQHS----------EPHYYTDQTIKGLAMTMLL 309
++++ + K + ++ +M+D L+ + + + +D I +
Sbjct: 226 NKILENYKEKFRS--DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFG 283
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETL 369
AG +TT ++W ++ L+++P V +K E+D +VG D ++L L I E L
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 370 RLYPTAPLLVPHRSSDDCVVGGFDV 394
RL P AP+L+PH+++ D +G F V
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAV 368
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 145/392 (36%), Gaps = 44/392 (11%)
Query: 30 GRRRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXE 89
++ K PP P P+IG+ + H L+++YG +
Sbjct: 2 AKKTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGER 61
Query: 90 AAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNV 149
A + + FA+RP S + +S ++ Y + W+ RR S N
Sbjct: 62 AIHQALVQQGSAFADRPSFASFRVVSGG-RSMAFGHYSEHWKVQRRAA-----HSMMRNF 115
Query: 150 FS--PIRR--------DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKR 199
F+ P R E + L+ L + F ++ + L NVM + G R
Sbjct: 116 FTRQPRSRQVLEGHVLSEARELVALLVRGSADGAF--LDPRPLTVVAVANVMSAVCFGCR 173
Query: 200 YFGDD-----VLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKR 254
Y DD +L EE GR G + D +P L + N + + + ++
Sbjct: 174 YSHDDPEFRELLSHNEEFGR----------TVGAGSLVDVMPWLQYFPNPVRTVFREFEQ 223
Query: 255 MDEFFQRLVDERRNKKEACLENT----DSMIDHLLSLQ-------HSEPHYYTDQTIKGL 303
++ F + ++ + L D M +LS + H + +
Sbjct: 224 LNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPAT 283
Query: 304 AMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHC 363
+ A DT + ++W + +PDV + AELD VG+ L D L Y+
Sbjct: 284 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLA 343
Query: 364 IISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ E +R P+ +PH ++ + V G+ +P
Sbjct: 344 FLYEAMRFSSFVPVTIPHATTANTSVLGYHIP 375
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y + G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSN--GERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + ++ S NV+ IV G R+ +D+E
Sbjct: 129 -EEAGFLIDALRGTGG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYKDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G F + TS G M + + + +++ ++ + +++F + V+ N++
Sbjct: 180 LRMMLG-IFQFTSTST-GQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L + GT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y+ +I E R P+ + R D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y + G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSN--GERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + ++ S NV+ IV G R+ +D+E
Sbjct: 129 -EEAGFLIDALRGTGG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYKDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G F + TS G M + + + +++ ++ + +++F + V+ N++
Sbjct: 180 LRMMLG-IFQFTSTST-GQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L + GT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y+ +I E R P+ + R D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y + G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSN--GERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + ++ S NV+ IV G R+ +D+E
Sbjct: 129 -EEAGFLIDALRGTGG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYKDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G F + TS G M + + + +++ ++ + +++F + V+ N++
Sbjct: 180 LRMMLG-IFQFTSTST-GQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L + GT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y+ +I E R P+ + R D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 32/372 (8%)
Query: 38 LPPSPPCMPVIGHL-HLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +PV+G+L + + R L ++YG + +A +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R K I Y + G+RWR LRR + + + +V I+
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY-FGDDVLE-----D 208
+E + L+++L + + + ++ LF +T N++ IV GKR+ + D V
Sbjct: 129 -EEARCLVEELR----KSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 209 EEEAGRFKEIVGEAFAL-SGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERR 267
+ + F L SG L + ++I + + ++ F + V++ R
Sbjct: 184 FQSFSLISSFSSQVFELFSG---------FLKYFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 268 NKKEACLENTDSMID-HLLSLQH--SEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEWAM 323
+ N ID +LL ++ S+P + Q + +++ AGT+TT+ T+ +
Sbjct: 235 ATLDPS--NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGF 292
Query: 324 SNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRS 383
++ +P V ++ E++ +G D +K+ Y +I E RL P VPH
Sbjct: 293 LLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTV 352
Query: 384 SDDCVVGGFDVP 395
+ D G+ +P
Sbjct: 353 TKDTQFRGYVIP 364
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 152/369 (41%), Gaps = 26/369 (7%)
Query: 38 LPPSPPCMPVIG-HLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P IG +L L + L +S++YGP+ +A +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R + + + Y + G+R + LRR I + + + I+
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSN--GERAKQLRRFSIATLRDFGVGKRGIEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
+E L+ L + ++ S NV+ IV G R+ +D+E
Sbjct: 129 -EEAGFLIDALRGTGG----ANIDPTFFLSRTVSNVISSIVFGDRF----DYKDKEFLSL 179
Query: 215 FKEIVGEAFALSGTSNPGDHLPMLNWISNY----EKRIVKISKRMDEFFQRLVDERRNKK 270
+ ++G F + TS G M + + + +++ + + +++F + V+ N++
Sbjct: 180 LRMMLG-IFQFTSTST-GQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEH--NQR 235
Query: 271 EACLENTDSMIDH-LLSLQHSEPHYYTDQTIKGLAMTML---LAGTDTTAVTMEWAMSNL 326
+ ID L+ +Q E + T+ +K L MT L + GT+T + T+ + L
Sbjct: 236 TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLL 295
Query: 327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDD 386
+ HP+V K E+D +G+ D +K+ Y+ +I E R P+ + R D
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 387 CVVGGFDVP 395
F +P
Sbjct: 356 TKFRDFFLP 364
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 36/374 (9%)
Query: 38 LPPSPPCMPVIGHL-HLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +PV+G+L + + R L ++YG + +A +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R K I Y + G+RWR LRR + + + +V I+
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY-FGDDVL------- 206
+E + L+++L + + + ++ LF +T N++ IV GKR+ + D V
Sbjct: 129 -EEARCLVEELR----KSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 207 -EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE 265
+ F V E F+ PG H ++I + + ++ F + V++
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYFPGTH-----------RQIYRNLQEINTFIGQSVEK 232
Query: 266 RRNKKEACLENTDSMID-HLLSLQH--SEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEW 321
R + N ID +LL ++ S+P + Q + +++ AGT+TT+ T+ +
Sbjct: 233 HRATLDPS--NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRY 290
Query: 322 AMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPH 381
++ +P V ++ E++ +G D +K+ Y +I E RL P VPH
Sbjct: 291 GFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 382 RSSDDCVVGGFDVP 395
+ D G+ +P
Sbjct: 351 TVTKDTQFRGYVIP 364
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 36/374 (9%)
Query: 38 LPPSPPCMPVIGHL-HLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +PV+G+L + + R L ++YG + +A +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R K I Y + G+RWR LRR + + + +V I+
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY-FGDDVL------- 206
+E + L+++L + + + ++ LF +T N++ IV GKR+ + D V
Sbjct: 129 -EEARCLVEELR----KSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 207 -EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE 265
+ F V E F+ PG H ++I + + ++ F + V++
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYFPGTH-----------RQIYRNLQEINTFIGQSVEK 232
Query: 266 RRNKKEACLENTDSMID-HLLSLQH--SEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEW 321
R + N ID +LL ++ S+P + Q + +++ AGT+TT+ T+ +
Sbjct: 233 HRATLDPS--NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRY 290
Query: 322 AMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPH 381
++ +P V ++ E++ +G D +K+ Y +I E RL P VPH
Sbjct: 291 GFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 382 RSSDDCVVGGFDVP 395
+ D G+ +P
Sbjct: 351 TVTKDTQFRGYVIP 364
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 36/374 (9%)
Query: 38 LPPSPPCMPVIGHL-HLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +PV+G+L + + R L ++YG + +A +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R K I Y + G+RWR LRR + + + +V I+
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY-FGDDVL------- 206
+E + L+++L + + + ++ LF +T N++ IV GKR+ + D V
Sbjct: 129 -EEARCLVEELR----KSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 207 -EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE 265
+ F V E F+ PG H ++I + + ++ F + V++
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKHFPGTH-----------RQIYRNLQEINTFIGQSVEK 232
Query: 266 RRNKKEACLENTDSMID-HLLSLQH--SEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEW 321
R + N ID +LL ++ S+P + Q + +++ AGT+TT+ T+ +
Sbjct: 233 HRATLDPS--NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRY 290
Query: 322 AMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPH 381
++ +P V ++ E++ +G D +K+ Y +I E RL P VPH
Sbjct: 291 GFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 382 RSSDDCVVGGFDVP 395
+ D G+ +P
Sbjct: 351 TVTKDTQFRGYVIP 364
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 36/374 (9%)
Query: 38 LPPSPPCMPVIGHL-HLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +PV+G+L + + R L ++YG + +A +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R K I Y + G+RWR LRR + + + +V I+
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY-FGDDVL------- 206
+E + L+++L + + + ++ LF +T N++ IV GKR+ + D V
Sbjct: 129 -EEARCLVEELR----KSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 207 -EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE 265
+ F V E F+ PG H ++I + + ++ F + V++
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYFPGTH-----------RQIYRNLQEINTFIGQSVEK 232
Query: 266 RRNKKEACLENTDSMID-HLLSLQH--SEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEW 321
R + N ID +LL ++ S+P + Q + +++ AGT+TT+ T+ +
Sbjct: 233 HRATLDPS--NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRY 290
Query: 322 AMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPH 381
++ +P V ++ E++ +G D +K+ Y +I E RL P VPH
Sbjct: 291 GFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 382 RSSDDCVVGGFDVP 395
+ D G+ +P
Sbjct: 351 TVTKDTQFRGYVIP 364
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 151/366 (41%), Gaps = 21/366 (5%)
Query: 38 LPPSPPCMPVIGHLHLIK-PPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P+IG+L ++ + L++++GP+ +A +E
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
F+ R L H + + G W+++RR +T + + S I+
Sbjct: 71 DYKDEFSGR-GDLPAFHAHRDRGIIFNN--GPTWKDIRRFSLTTLRNYGMGKQGNESRIQ 127
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGR 214
R E LL+ L Q F L NV+ I+ K + +D E+ R
Sbjct: 128 R-EAHFLLEALRKTQG-QPFDPT---FLIGCAPCNVIADILFRKHFDYND-----EKFLR 177
Query: 215 FKEIVGEAFALSGTS--NPGDHLP-MLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKE 271
+ E F L T ++ P L+++ ++++K + E+ V E +
Sbjct: 178 LMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLD 237
Query: 272 A-CLEN-TDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNH 329
C + TD ++ + +HS YT I + AGT+TT+ T+ + + L+ +
Sbjct: 238 PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKY 297
Query: 330 PDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVV 389
P++ +K E+D +G + D ++ Y+ ++ E R P +PH ++ D +
Sbjct: 298 PEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF 357
Query: 390 GGFDVP 395
G+ +P
Sbjct: 358 RGYLIP 363
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 139/351 (39%), Gaps = 32/351 (9%)
Query: 59 HRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFTKNDVVFANRPKSLSGKHISYNY 118
H ++ S+ YG I + +EC +FA+RP L
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP-CLPLFMKMTKM 95
Query: 119 TTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSK-- 176
L+ + YG W + RR L+ N F ++ ++L++ E K
Sbjct: 96 GGLLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 177 -VELKTLFSELTINVMMRIVAGKRYFGDDV---------LEDEEEAGRFKEIVGEAFALS 226
+ K L + N+ I+ G+R+ +D E+ E A + AF
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWI 209
Query: 227 GTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLEN--TDSMIDHL 284
G G H +++ + + + +F RL+++ ++ L D+ +D +
Sbjct: 210 GILPFGKH-----------QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEM 258
Query: 285 LSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV 344
++ ++ + + +++AGT+TT + WA+ + +P++ + E+D +
Sbjct: 259 DQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM 318
Query: 345 GQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
G D K+ Y ++ E LR PL + H +S+D VV G+ +P
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 139/351 (39%), Gaps = 32/351 (9%)
Query: 59 HRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFTKNDVVFANRPKSLSGKHISYNY 118
H ++ S+ YG I + +EC +FA+RP L
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP-CLPLFMKMTKM 95
Query: 119 TTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSK-- 176
L+ + YG W + RR L+ N F ++ ++L++ E K
Sbjct: 96 GGLLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 177 -VELKTLFSELTINVMMRIVAGKRYFGDDV---------LEDEEEAGRFKEIVGEAFALS 226
+ K L + N+ I+ G+R+ +D E+ E A + AF
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWI 209
Query: 227 GTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLEN--TDSMIDHL 284
G G H +++ + + + +F RL+++ ++ L D+ +D +
Sbjct: 210 GILPFGKH-----------QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEM 258
Query: 285 LSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV 344
++ ++ + + +++AGT+TT + WA+ + +P++ + E+D +
Sbjct: 259 DQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM 318
Query: 345 GQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
G D K+ Y ++ E LR PL + H +S+D VV G+ +P
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 33/287 (11%)
Query: 124 APYGDRWRNLRR--ITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKT 181
A YG WR RR ++ + L + ++ + E L AN+S + F
Sbjct: 100 ARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV--TEEAACLCAAFANHSGRPFRP---NG 154
Query: 182 LFSELTINVMMRIVAGKRYFGDDV-------LEDE---EEAGRFKEIVGEAFALSGTSNP 231
L + NV+ + G+R+ DD L E EE+G +E++
Sbjct: 155 LLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL------------ 202
Query: 232 GDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERR---NKKEACLENTDSMIDHLLSLQ 288
+ +P+L I ++++ K L+ E R + + + T++ + + +
Sbjct: 203 -NAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAK 261
Query: 289 HSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQH 348
+ + D+ ++ + + AG TT+ T+ W + ++ HPDV ++ E+D +GQ
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 349 LFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ D + + Y +I E R PL V H +S D V GF +P
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIP 368
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 40/376 (10%)
Query: 38 LPPSPPCMPVIGH-LHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P +P+IG+ L + + N SK YGP+ EA +E
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNRVNVFSPIR 154
N F+ R S + I+ + + G RW+ +RR +T + + ++
Sbjct: 71 DNGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTLRNFGMGKRSI----- 123
Query: 155 RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDD-----VLEDE 209
D ++ L + + S + + NV+ +V KR+ D +++
Sbjct: 124 EDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRF 183
Query: 210 EEAGRFKEI----VGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE 265
E R V F L PG H +L ++ + + E
Sbjct: 184 NENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVA---------------LTRSYIRE 228
Query: 266 RRNKKEACLE--NTDSMID-HLLSLQHSEPHYYTDQTIKGLAMT---MLLAGTDTTAVTM 319
+ + +A L+ N ID L+ ++ + + ++ I+ L T + +AGT+TT+ T+
Sbjct: 229 KVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTL 288
Query: 320 EWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
+ + L+ HP+V K E+D +G+ D S + Y ++ E R P V
Sbjct: 289 RYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGV 348
Query: 380 PHRSSDDCVVGGFDVP 395
PH + D + +P
Sbjct: 349 PHAVTTDTKFRNYLIP 364
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 35/288 (12%)
Query: 124 APYGDRWRNLRR--ITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKT 181
A YG WR RR ++ + L + ++ + E L AN+S + F
Sbjct: 100 ARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV--TEEAACLCAAFANHSGRPFRP---NG 154
Query: 182 LFSELTINVMMRIVAGKRYFGDDV-------LEDE---EEAGRFKEIVGEAFALSGTSNP 231
L + NV+ + G+R+ DD L E EE+G +E++ + P
Sbjct: 155 LLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL--------NAVP 206
Query: 232 GD-HLPMLNWISNYEKRIVKISKRMDEFFQRLVDERR---NKKEACLENTDSMIDHLLSL 287
D H+P L ++++ K L+ E R + + + T++ + +
Sbjct: 207 VDRHIPAL------AGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKA 260
Query: 288 QHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ 347
+ + + D+ ++ + + AG TT+ T+ W + ++ HPDV ++ E+D +GQ
Sbjct: 261 KGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV 320
Query: 348 HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ D + + Y +I E R PL + H +S D V GF +P
Sbjct: 321 RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIP 368
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 32/376 (8%)
Query: 34 GYKNLPPSPPCMPVIGH-LHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQ 92
G LPP P +PVIG+ L + + L NLSK YGP+ E +
Sbjct: 8 GRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVK 67
Query: 93 ECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSP 152
E F+ R + + + + G RW+ +RR + +++ +
Sbjct: 68 EALIDLGEEFSGRGHFPLAERANRGFGIVFSN--GKRWKEIRRFS---LMTLRNFGMGKR 122
Query: 153 IRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDD-----VLE 207
D ++ + L + + S + + NV+ I+ KR+ D ++E
Sbjct: 123 SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLME 182
Query: 208 DEEEAGRFKEI----VGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLV 263
E R + F PG H +L ++ E I++ K E
Sbjct: 183 KLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMD--- 239
Query: 264 DERRNKKEACLENTDSMID-HLLSLQHSEPHYYTDQTIKGLAMT---MLLAGTDTTAVTM 319
+ N ID L+ ++ + + ++ TI+ L +T +L AGT+TT+ T+
Sbjct: 240 ----------INNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTL 289
Query: 320 EWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
+A+ L+ HP+V K E++ VG+ D + Y ++ E R P +
Sbjct: 290 RYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSL 349
Query: 380 PHRSSDDCVVGGFDVP 395
PH + D + +P
Sbjct: 350 PHAVTCDVKFRNYLIP 365
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 218 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 277
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 278 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 336
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 337 Y-AKEDTVLGG 346
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 218 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 277
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PT+P
Sbjct: 278 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSL 336
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 337 Y-AKEDTVLGG 346
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG ++T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG ++T+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG ++T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG +TT+ +
Sbjct: 218 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 277
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PT P
Sbjct: 278 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSL 336
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 337 Y-AKEDTVLGG 346
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L+ G +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L + E D+ I+ +T L+AG +TT+ +
Sbjct: 221 LVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLS 280
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+ + LV +P VLQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 281 FTLYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 339
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 340 Y-AKEDTVLGG 349
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 137/315 (43%), Gaps = 21/315 (6%)
Query: 89 EAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRR--ITAIEVLSSNR 146
EA +E F+ R K Y + G+RW+ LRR +T + +
Sbjct: 63 EAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFAN--GNRWKVLRRFSVTTMRDFGMGK 120
Query: 147 VNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVL 206
+V I+ +E + L+++L + + + ++ LF +T N++ IV GKR+ D
Sbjct: 121 RSVEERIQ-EEAQCLIEELR----KSKGALMDPTFLFQSITANIICSIVFGKRFHYQD-- 173
Query: 207 EDEEEAGRFKEIVGEAFALSGTSNPGDHLPM----LNWISNYEKRIVKISKRMDEFFQRL 262
+E + + + F+L +S G + L +++ K + ++ +
Sbjct: 174 ---QEFLKMLNLFYQTFSLI-SSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHS 229
Query: 263 VDERRNKKE--ACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTME 320
V++ R + A + D+ + H+ + + ++ Q + +++ AGT+TT+ T+
Sbjct: 230 VEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLR 289
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+ ++ +P V ++ E++ +G + D +K+ Y +I E R P+ VP
Sbjct: 290 YGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVP 349
Query: 381 HRSSDDCVVGGFDVP 395
H + G+ +P
Sbjct: 350 HIVTQHTSFRGYIIP 364
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L + E D+ I+ +T L+AG +TT+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLT 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LR++PTAP
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D ++GG
Sbjct: 335 Y-AKEDTMLGG 344
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 142/363 (39%), Gaps = 17/363 (4%)
Query: 38 LPPSPPCMPVIGH-LHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXXEAAQECFT 96
LPP P P+IG+ L + + L S+ YGP+ EA +E
Sbjct: 11 LPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALV 70
Query: 97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRD 156
FA R + +S + W+ +RR + +++ + D
Sbjct: 71 DLGEEFAGRGSVPILEKVSKGLG--IAFSNAKTWKEMRRFS---LMTLRNFGMGKRSIED 125
Query: 157 EIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFK 216
I+ + L + S + + NV+ ++ R+ D EE +
Sbjct: 126 RIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKD-----EEFLKLM 180
Query: 217 EIVGEAFALSGTS--NPGDHLP-MLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEAC 273
E + E L GT ++ P +L++ K ++K + + F V E ++K
Sbjct: 181 ESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKE--HQKLLD 238
Query: 274 LENTDSMID-HLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDV 332
+ N ID L+ ++ +T +++ + AGT+TT+ T+ +++ L+ HP+V
Sbjct: 239 VNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEV 298
Query: 333 LQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGF 392
+ E++ +G+ D S++ Y +I E R P +PH + D +
Sbjct: 299 AARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNY 358
Query: 393 DVP 395
+P
Sbjct: 359 FIP 361
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L AG + T+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PT P
Sbjct: 276 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQKA AE V + + +LKY+ +++E LRL+PT P
Sbjct: 275 FALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ +L+ + E D I +T L+AG +TT+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P VLQK AE T V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHVLQK-VAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L AG + T+ +
Sbjct: 216 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 275
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P LQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 276 FALYFLVKNPHELQKA-AEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 335 Y-AKEDTVLGG 344
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTME 320
LVD+ ++A E +D ++ H+L+ + E D+ I+ +T L AG + T+ +
Sbjct: 215 LVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 274
Query: 321 WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVP 380
+A+ LV +P LQKA AE V + + +LKY+ +++E LRL+PTAP
Sbjct: 275 FALYFLVKNPHELQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 381 HRSSDDCVVGG 391
+ + +D V+GG
Sbjct: 334 Y-AKEDTVLGG 343
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%)
Query: 264 DERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAM 323
D + ++EA + D L + +E D+ + +T +AG +T+A + + +
Sbjct: 208 DWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTV 267
Query: 324 SNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTA 375
L P+++ + AE+D +G + D DL +L+YL ++ E+LRLYP A
Sbjct: 268 MELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPA 319
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D+++R++ E +++L F+ELTI + GK++ D L+ GRF
Sbjct: 119 DQVRRMIADWG------EAGEIDLLDFFAELTIYTSSACLIGKKF--RDQLD-----GRF 165
Query: 216 KEIVGEAFALSGTSNP----GDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKE 271
++ E L ++P +LP+ ++ E R ++ D R+ + +K +
Sbjct: 166 AKLYHE---LERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSD 222
Query: 272 ACLENTDSMIDHLLSL--QHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNH 329
M+D L+++ + P + D+ I G+ ++M+ AG T++ T W + L+ H
Sbjct: 223 R------DMLDVLIAVKAETGTPRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 330 PDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
D ELD G L ++ L ++ ETLRL+P PL++
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLII 323
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D+++R++ E +++L F+ELTI + GK++ D L+ GRF
Sbjct: 119 DQVRRMIADWG------EAGEIDLLDFFAELTIYTSSATLIGKKF--RDQLD-----GRF 165
Query: 216 KEIVGEAFALSGTSNP----GDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKE 271
++ E L ++P +LP+ ++ E R ++ D R+ + +K +
Sbjct: 166 AKLYHE---LERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSD 222
Query: 272 ACLENTDSMIDHLLSL--QHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNH 329
M+D L+++ + P + D+ I G+ ++M+ AG T++ T W + L+ H
Sbjct: 223 R------DMLDVLIAVKAETGTPRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 330 PDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
D ELD G L ++ L ++ ETLRL+P PL++
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLII 323
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D+++R++ E +++L F+ELTI + GK++ D L+ GRF
Sbjct: 119 DQVRRMIADWG------EAGEIDLLDFFAELTIYTSSACLIGKKF--RDQLD-----GRF 165
Query: 216 KEIVGEAFALSGTSNP----GDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKE 271
++ E L ++P +LP+ ++ E R ++ D R+ + +K +
Sbjct: 166 AKLYHE---LERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSD 222
Query: 272 ACLENTDSMIDHLLSL--QHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNH 329
M+D L+++ + P + D+ I G+ ++M+ AG T++ T W + L+ H
Sbjct: 223 R------DMLDVLIAVKAETGTPRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 330 PDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
D ELD G L ++ L ++ ETLRL+P PL++
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLII 323
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D+++R++ E +++L F+ELTI + GK++ D L+ GRF
Sbjct: 119 DQVRRMIADWG------EAGEIDLLDFFAELTIYTSSACLIGKKF--RDQLD-----GRF 165
Query: 216 KEIVGEAFALSGTSNP----GDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKE 271
++ E L ++P +LP+ ++ E R ++ D R+ + +K +
Sbjct: 166 AKLYHE---LERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSD 222
Query: 272 ACLENTDSMIDHLLSL--QHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNH 329
M+D L+++ + P + D+ I G+ ++M+ AG T++ T W + L+ H
Sbjct: 223 R------DMLDVLIAVKAETGTPRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 330 PDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLV 379
D ELD G L ++ L ++ ETLRL+P PL++
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLII 323
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 128 DRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQ-EFSK-VELKTLFSE 185
+ W+ LR + + +S ++ PI I + L N R+ E K V LK +F
Sbjct: 104 EEWKRLRSLLS-PTFTSGKLKEMVPI----IAQYGDVLVRNLRREAETGKPVTLKDVFGA 158
Query: 186 LTINVMMRIVAGKRYFG-----DDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW 240
+++V+ G D +E+ ++ RF + + F LS T P +P+L
Sbjct: 159 YSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL--DPFFLSITVFPF-LIPILEV 215
Query: 241 ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDS--------MIDHLLSLQHSEP 292
++ I + + F ++ V + KE+ LE+T MID S +
Sbjct: 216 LN-----ICVFPREVTNFLRKSV---KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESH 267
Query: 293 HYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDE 352
+D + ++ + AG +TT+ + + M L HPDV QK E+D + +
Sbjct: 268 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 327
Query: 353 PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ +++YL +++ETLRL+P A + + D + G +P
Sbjct: 328 DTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIP 369
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 128 DRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQ-EFSK-VELKTLFSE 185
+ W+ LR + + +S ++ PI I + L N R+ E K V LK +F
Sbjct: 103 EEWKRLRSLLS-PTFTSGKLKEMVPI----IAQYGDVLVRNLRREAETGKPVTLKDVFGA 157
Query: 186 LTINVMMRIVAGKRYFG-----DDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW 240
+++V+ G D +E+ ++ RF + + F LS T P +P+L
Sbjct: 158 YSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL--DPFFLSITVFPF-LIPILEV 214
Query: 241 ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDS--------MIDHLLSLQHSEP 292
++ I + + F ++ V + KE+ LE+T MID S +
Sbjct: 215 LN-----ICVFPREVTNFLRKSV---KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESH 266
Query: 293 HYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDE 352
+D + ++ + AG +TT+ + + M L HPDV QK E+D + +
Sbjct: 267 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 326
Query: 353 PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ +++YL +++ETLRL+P A + + D + G +P
Sbjct: 327 DTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIP 368
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 128 DRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQ-EFSK-VELKTLFSE 185
+ W+ LR + + +S ++ PI I + L N R+ E K V LK +F
Sbjct: 102 EEWKRLRSLLS-PTFTSGKLKEMVPI----IAQYGDVLVRNLRREAETGKPVTLKDVFGA 156
Query: 186 LTINVMMRIVAGKRYFG-----DDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW 240
+++V+ G D +E+ ++ RF + + F LS T P +P+L
Sbjct: 157 YSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL--DPFFLSITVFPF-LIPILEV 213
Query: 241 ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDS--------MIDHLLSLQHSEP 292
++ I + + F ++ V + KE+ LE+T MID S +
Sbjct: 214 LN-----ICVFPREVTNFLRKSV---KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESH 265
Query: 293 HYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDE 352
+D + ++ + AG +TT+ + + M L HPDV QK E+D + +
Sbjct: 266 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 325
Query: 353 PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ +++YL +++ETLRL+P A + + D + G +P
Sbjct: 326 DTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIP 367
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEW 321
LVDE ++ A + D ++ LL + +Q I + +L G++T A T+ W
Sbjct: 226 LVDEIIAERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMW 285
Query: 322 AMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPH 381
+ L +HP+ + E++ G + + E D+ KL++ +I E +RL P +L
Sbjct: 286 LLQALADHPEHADRIRDEVEAVTGGRPVAFE-DVRKLRHTGNVIVEAMRLRPAVWVLT-R 343
Query: 382 RSSDDCVVGGFDVP 395
R+ + +GG+ +P
Sbjct: 344 RAVAESELGGYRIP 357
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 238 LNWI-SNYEKRIVKISKRMDEFFQRLVDERRNK---KEACLENTDSMIDHLLSLQHSEPH 293
++W+ YEK + K + + + L+ E+R + +E E D + +L+ + +
Sbjct: 237 ISWLYKKYEKSV----KDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGD-- 290
Query: 294 YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEP 353
T + + + ML+A DT +V++ + + + HP+V + E+ T +G++ + +
Sbjct: 291 -LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKID- 348
Query: 354 DLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDV 394
D+ KLK + I E++R P L++ DD V+ G+ V
Sbjct: 349 DIQKLKVMENFIYESMRYQPVVDLVMRKALEDD-VIDGYPV 388
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 148/390 (37%), Gaps = 75/390 (19%)
Query: 36 KNLPP---SPPCM----PVIGHLHLIKPPTHRFLYNLSKQYGPIXXXXXXXXXXXXXXXX 88
K LP SPP + P +GH FL N ++YGP+
Sbjct: 4 KTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGS 63
Query: 89 EAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVN 148
+AA ++F ++ + L+ + + Y+ L +G +
Sbjct: 64 DAAA-------LLFNSKNEDLNAEDV---YSRLTTPVFG---------------KGVAYD 98
Query: 149 VFSPIRRDEIKRLLKKLSANYSRQEFSKVELKT-----------------LFSELTINVM 191
V +P+ ++ K L L+ + +Q S +E +T SEL I
Sbjct: 99 VPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTA 158
Query: 192 MRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFAL--SGTSNPGDHLPMLNWISNYEKRIV 249
+ GK E + E V + +A G S+ LP + ++ +R
Sbjct: 159 SHCLHGK-----------EIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRR-D 206
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ + + + F + + +RR +E D ++ LL + + TD + G+ + +LL
Sbjct: 207 RAHREIKDIFYKAIQKRRQSQE----KIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLL 262
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ---HLFDEPDLSKLKYLHCIIS 366
AG T++ T W L + +K E T G+ +D+ L L L I
Sbjct: 263 AGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQ--LKDLNLLDRCIK 320
Query: 367 ETLRLYPTAPLLVPHR-SSDDCVVGGFDVP 395
ETLRL P P+++ R + V G+ +P
Sbjct: 321 ETLRLRP--PIMIMMRMARTPQTVAGYTIP 348
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 53/275 (19%)
Query: 121 LVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELK 180
+Q+ G R LR + A + R+ P R +++L+ KL + +F V+
Sbjct: 89 FLQSLDGADHRRLRGL-ATHPFTPRRITAVQPFVRSTVEQLIDKLP----QGDFDFVQ-- 141
Query: 181 TLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW 240
L VM +++ LED + GR LS +N G L
Sbjct: 142 HFAHPLPALVMCQLLGFP-------LEDYDTVGR----------LSIETNLGLAL----- 179
Query: 241 ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTI 300
SN + +VK+ + + F LV +K +E D + ++ H D +
Sbjct: 180 -SNDQDILVKVEQGLGRMFDYLVAAIEKRK---VEPGDDLTSDIVRAFHD--GVLDDYEL 233
Query: 301 KGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKY 360
+ L T+L+AG +TT + AM + HPD K + + P+L+
Sbjct: 234 RTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMK-------------IKENPELAPQA- 279
Query: 361 LHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ E LR PT P+ +++D V G +P
Sbjct: 280 ----VEEVLRWSPTLPVTATRVAAEDFEVNGVRIP 310
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 44/287 (15%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 104 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 157
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + +P ++
Sbjct: 158 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAKM--------ESSLIPAAVFLPI 203
Query: 244 YEKRIVKISKRMDEF---FQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQT- 299
K + S R E Q+++ E ++A N DS LLS S Y D T
Sbjct: 204 LLKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSA--VYRDGTP 261
Query: 300 -----IKGLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHL 349
+ G+ + + AG T+++T W+M +L V H + L+K E + ++
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV 321
Query: 350 FDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRS-SDDCVVGGFDVP 395
DE + + E++R P PLL+ R D VG + VP
Sbjct: 322 MDE-----MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 361
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 53/275 (19%)
Query: 121 LVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELK 180
+Q+ G R LR + A + R+ P R +++L+ KL + +F V+
Sbjct: 99 FLQSLDGADHRRLRGL-ATHPFTPRRITAVQPFVRSTVEQLIDKLP----QGDFDFVQ-- 151
Query: 181 TLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW 240
L VM +++ LED + GR LS +N G L
Sbjct: 152 HFPHPLPALVMCQLLGFP-------LEDYDTVGR----------LSIETNLGLAL----- 189
Query: 241 ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTI 300
SN + +VK+ + + F LV +K +E D + ++ H D +
Sbjct: 190 -SNDQDILVKVEQGLGRMFDYLVAAIEKRK---VEPGDDLTSDIVRAFHD--GVLDDYEL 243
Query: 301 KGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKY 360
+ L T+L+AG +TT + AM + HPD K + + P+L+
Sbjct: 244 RTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMK-------------IKENPELAPQA- 289
Query: 361 LHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ E LR PT P+ +++D V G +P
Sbjct: 290 ----VEEVLRWSPTLPVTATRVAAEDFEVNGVRIP 320
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 309 LAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISET 368
LA +TTA ++ W + NL +P ++ E+ + + DL + YL + E+
Sbjct: 293 LAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKES 352
Query: 369 LRLYPTAPLLVPHRSSDD-CVVGGFDVP 395
+RL P+ P R+ D V+G + +P
Sbjct: 353 MRLTPSVPFTT--RTLDKPTVLGEYALP 378
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 91 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 144
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + + + P +
Sbjct: 145 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAK---MESSLIPAAVFLPILLKLP 195
Query: 244 YEK--RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIK 301
+ R + + + ++ R+ ++ +T ++ LLS + + + +
Sbjct: 196 LPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVC 255
Query: 302 GLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHLFDEPDLS 356
G+ + + AG T+++T W+M +L V H + L+K E + ++ DE
Sbjct: 256 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 311
Query: 357 KLKYLHCIISETLRLYPTAPLLVPHRS-SDDCVVGGFDVP 395
+ + E++R P PLL+ R D VG + VP
Sbjct: 312 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 348
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 104 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 157
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + + + P +
Sbjct: 158 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAK---MESSLIPAAVFLPILLKLP 208
Query: 244 YEK--RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIK 301
+ R + + + ++ R+ ++ +T ++ LLS + + + +
Sbjct: 209 LPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVC 268
Query: 302 GLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHLFDEPDLS 356
G+ + + AG T+++T W+M +L V H + L+K E + ++ DE
Sbjct: 269 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 324
Query: 357 KLKYLHCIISETLRLYPTAPLLVPHRS-SDDCVVGGFDVP 395
+ + E++R P PLL+ R D VG + VP
Sbjct: 325 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 361
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 90 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 143
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + + + P +
Sbjct: 144 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAK---MESSLIPAAVFLPILLKLP 194
Query: 244 YEK--RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIK 301
+ R + + + ++ R+ ++ +T ++ LLS + + + +
Sbjct: 195 LPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVC 254
Query: 302 GLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHLFDEPDLS 356
G+ + + AG T+++T W+M +L V H + L+K E + ++ DE
Sbjct: 255 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 310
Query: 357 KLKYLHCIISETLRLYPTAPLLVPHRS-SDDCVVGGFDVP 395
+ + E++R P PLL+ R D VG + VP
Sbjct: 311 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 347
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 92 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 145
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + + + P +
Sbjct: 146 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAK---MESSLIPAAVFLPILLKLP 196
Query: 244 YEK--RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIK 301
+ R + + + ++ R+ ++ +T ++ LLS + + + +
Sbjct: 197 LPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVC 256
Query: 302 GLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHLFDEPDLS 356
G+ + + AG T+++T W+M +L V H + L+K E + ++ DE
Sbjct: 257 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 312
Query: 357 KLKYLHCIISETLRLYPTAPLLVPHRSS-DDCVVGGFDVP 395
+ + E++R P PLL+ R D VG + VP
Sbjct: 313 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 349
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 124 APYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLF 183
APY R R A E L+ + F P + E+++ + +AN+ + E ++ L
Sbjct: 91 APY-PRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFM---AANWDKDE-GEINLLEDC 144
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN 243
S + IN A + FG+D L +A RF +++ + + + P +
Sbjct: 145 STMIINT-----ACQCLFGED-LRKRLDARRFAQLLAK---MESSLIPAAVFLPILLKLP 195
Query: 244 YEK--RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIK 301
+ R + + + ++ R+ ++ +T ++ LLS + + + +
Sbjct: 196 LPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVC 255
Query: 302 GLAMTMLLAGTDTTAVTMEWAMSNL-----VNHPDVLQKATAELDTHVGQQHLFDEPDLS 356
G+ + + AG T+++T W+M +L V H + L+K E + ++ DE
Sbjct: 256 GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE---- 311
Query: 357 KLKYLHCIISETLRLYPTAPLLVPHRS-SDDCVVGGFDVP 395
+ + E++R P PLL+ R D VG + VP
Sbjct: 312 -MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVP 348
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 103/288 (35%), Gaps = 42/288 (14%)
Query: 127 GDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSEL 186
G WR R +VLS V F P ++ ++ ++S Q K L+ L
Sbjct: 108 GPEWRFNRLRLNPDVLSPKAVQRFLP--------MVDAVARDFS-QALKKKVLQNARGSL 158
Query: 187 TINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEK 246
T++V + EA + GE L G S L L+ + K
Sbjct: 159 TLDVQ-----------PSIFHYTIEASNLA-LFGERLGLVGHSPSSASLNFLHALEVMFK 206
Query: 247 RIVKISKRMDEFFQRLVDERRNKK-----EACLENTDSMIDHLLS-LQHSEPHYYTD--- 297
V++ M R + + K+ + + D+ I + L + P +YT
Sbjct: 207 STVQL-MFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVA 265
Query: 298 ----------QTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ 347
+ IK +M + DTTA + + L +PDV Q E
Sbjct: 266 ELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASI 325
Query: 348 HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
+ ++L L + ETLRLYP L + S D V+ + +P
Sbjct: 326 SEHPQKATTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIP 372
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 39/175 (22%)
Query: 233 DHLPMLNWISNYEKRIVKISK-------------RMDEFFQRLVDERRNKKEACLENTDS 279
DH + W S I IS+ ++ ++ ++ ERR N S
Sbjct: 186 DHEKISEWHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERR-------VNPGS 238
Query: 280 MIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAE 339
+ +L E +D+ I L + +LLA T+ T+ + +L+N+P+ +
Sbjct: 239 DLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV--- 295
Query: 340 LDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDV 394
L+ + I+ETLR P L+P + S D VVGG ++
Sbjct: 296 ---------------LADRSLVPRAIAETLRYKPPVQ-LIPRQLSQDTVVGGMEI 334
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 255 MDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDT 314
M + RL+D +R ++ + ++ L+ + T + + G+A +L+AG +T
Sbjct: 214 MSGYLSRLIDSKRG------QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 315 TAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPT 374
T + M L++HPD L A++ L D L+Y + S T R +P
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRADMT-------LLDGAVEEMLRYEGPVESATYR-FPV 319
Query: 375 APL 377
P+
Sbjct: 320 EPV 322
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 255 MDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDT 314
M + RL+D +R ++ + ++ L+ + T + + G+A +L+AG +T
Sbjct: 214 MSGYLSRLIDSKRG------QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 315 TAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPT 374
T + M L++HPD L A++ L D L+Y + S T R +P
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRADMT-------LLDGAVEEMLRYEGPVESATYR-FPV 319
Query: 375 APL 377
P+
Sbjct: 320 EPV 322
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 255 MDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDT 314
M + RL+D +R ++ + ++ L+ + T + + G+A +L+AG +T
Sbjct: 214 MSGYLSRLIDSKRG------QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 315 TAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPT 374
T + M L++HPD L A++ L D L+Y + S T R +P
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRADMT-------LLDGAVEEMLRYEGPVESATYR-FPV 319
Query: 375 APL 377
P+
Sbjct: 320 EPV 322
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 63/296 (21%)
Query: 130 WRNLRRITAIEVLS----SNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKV--ELKTLF 183
W+ R + EV++ N + + +P+ +D + L K++ S + + +L
Sbjct: 109 WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFA 168
Query: 184 SELTINVMMRIVAGKRYFGDDVLEDEE----EAGRFKEIVGEAFALSGTSNPGDHLPMLN 239
E NVM FG+ + EE EA +F + V + F S +P+LN
Sbjct: 169 FESITNVM---------FGERLGMLEETVNPEAQKFIDAVYKMFHTS--------VPLLN 211
Query: 240 -------------W---ISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDH 283
W ++ ++ K K + F+Q L R K E N ++
Sbjct: 212 VPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDL----RRKTE--FRNYPGILYC 265
Query: 284 LLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTH 343
LL SE D +K ML G +TT++T++W + + +V + E+
Sbjct: 266 LLK---SEKMLLED--VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNA 320
Query: 344 VGQQHLFDEPDLSKL----KYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
Q E D+SK+ L I ETLRL+P + L + S D V+ + +P
Sbjct: 321 RRQA----EGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPES-DLVLQDYLIP 371
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 104/269 (38%), Gaps = 47/269 (17%)
Query: 130 WRNLRRITAIEVLSSNRVNVFSP----IRRDEI----KRLLKKLSANYSRQEFSKVELKT 181
W+ R EV++ F P + RD + +R+ K S NYS + S +
Sbjct: 104 WKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYS-GDISDDLFRF 162
Query: 182 LFSELTINVMMRIVAGKRYFGDDVLED--EEEAGRFKEIVGEAFALSGTSNPGDHLPMLN 239
F +T ++ G+R +LE+ EA RF + + + F S +PMLN
Sbjct: 163 AFESIT-----NVIFGER---QGMLEEVVNPEAQRFIDAIYQMFHTS--------VPMLN 206
Query: 240 -------------WISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLS 286
W + V SK D + Q E R +K + + ++ LL
Sbjct: 207 LPPDLFRLFRTKTWKDHVAAWDVIFSK-ADIYTQNFYWELR-QKGSVHHDYRGILYRLLG 264
Query: 287 LQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQ 346
+ + IK ML G DTT++T++W + + + V AE+ Q
Sbjct: 265 DSKM-----SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 319
Query: 347 QHLFDEPDLSKLKYLHCIISETLRLYPTA 375
L + L I ETLRL+P +
Sbjct: 320 AQGDMATMLQLVPLLKASIKETLRLHPIS 348
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 48/289 (16%)
Query: 130 WRNLRRITAIEVLSSNRVNVFSP----IRRDEI----KRLLKKLSANYSRQEFSKVELKT 181
W+ R EV++ F P + RD + +R+ K S NYS + S +
Sbjct: 107 WKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYS-GDISDDLFRF 165
Query: 182 LFSELTINVMMRIVAGKRYFGDDVLED--EEEAGRFKEIVGEAFALSGTSNPGDHLPMLN 239
F +T ++ G+R +LE+ EA RF + + + F S +PMLN
Sbjct: 166 AFESIT-----NVIFGER---QGMLEEVVNPEAQRFIDAIYQMFHTS--------VPMLN 209
Query: 240 -------------WISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLS 286
W + V SK D + Q E R +K + + ++ LL
Sbjct: 210 LPPDLFRLFRTKTWKDHVAAWDVIFSK-ADIYTQNFYWELR-QKGSVHHDYRGILYRLLG 267
Query: 287 LQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQ 346
S+ + + IK ML G DTT++T++W + + + V AE+ Q
Sbjct: 268 --DSKMSF---EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 322
Query: 347 QHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP 395
L + L I ETLRL+P + L + +D V+ + +P
Sbjct: 323 AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYL-VNDLVLRDYMIP 370
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEW 321
++DERR LEN ++ LL + T + + L ++ AGTDTT + +
Sbjct: 212 VLDERRRNP---LEN--DVLTMLLQAEADGSRLSTKELV-ALVGAIIAAGTDTTIYLIAF 265
Query: 322 AMSNLVNHPDVLQKATAE 339
A+ NL+ P+ L+ AE
Sbjct: 266 AVLNLLRSPEALELVKAE 283
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 262 LVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEW 321
++DERR LEN ++ LL + T + + L ++ AGTDTT + +
Sbjct: 212 VLDERRRNP---LEN--DVLTMLLQAEADGSRLSTKELV-ALVGAIIAAGTDTTIYLIAF 265
Query: 322 AMSNLVNHPDVLQKATAE 339
A+ NL+ P+ L+ AE
Sbjct: 266 AVLNLLRSPEALELVKAE 283
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 296 TDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV 344
T+ + LAM +L AG D+ A M+ + L HPD Q+A A D V
Sbjct: 227 TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPD--QRAAALADPDV 273
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+S+Q + + + +A+ +LL
Sbjct: 186 QAAREVVNFILDLVERRRT------EPGDDLLSALISVQDDDDGRLSADELTSIALVLLL 239
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVLQKATAE 339
AG + + + L+ HPD L A+
Sbjct: 240 AGFEASVSLIGIGTYLLLTHPDQLALVRAD 269
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 268 NKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLV 327
+K+A E D ++D L++ Q E D+ + +A+ +L+AG +TT + L+
Sbjct: 204 GRKQA--EPEDGLLDELIARQLEEGDLDHDEVVM-IALVLLVAGHETTVNAIALGALTLI 260
Query: 328 NHPD 331
HP+
Sbjct: 261 QHPE 264
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+ +Q + + + +A+ +LL
Sbjct: 187 QAAREVVNFILDLVERRRT------EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVL 333
AG +T+ + L+ HPD L
Sbjct: 241 AGFETSVSLIGIGTYLLLTHPDQL 264
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 275 ENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPD--- 331
E D+++ LL++ + + + + +AM +L+AG +TT + + L+ HPD
Sbjct: 201 EPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRK 260
Query: 332 VLQKATAELDTHVGQQHLFDEP 353
+L + + + + V + FD P
Sbjct: 261 LLAEDPSLISSAVEEFLRFDSP 282
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 275 ENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPD--- 331
E D+++ LL++ + + + + +AM +L+AG +TT + + L+ HPD
Sbjct: 201 EPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRK 260
Query: 332 VLQKATAELDTHVGQQHLFDEP 353
+L + + + + V + FD P
Sbjct: 261 LLAEDPSLISSAVEEFLRFDSP 282
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+ +Q + + + +A+ +LL
Sbjct: 187 QAAREVVNFILDLVERRRT------EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVL 333
AG +++ + L+ HPD L
Sbjct: 241 AGFESSVSLIGIGTYLLLTHPDQL 264
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+ +Q + + + +A+ +LL
Sbjct: 186 QAAREVVNFILDLVERRRT------EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 239
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVL 333
AG +++ + L+ HPD L
Sbjct: 240 AGFESSVSLIGIGTYLLLTHPDQL 263
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 281 IDHLLSLQHSEPH-------------YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLV 327
+D+LL+ Q ++P TD+ +KGL ++L G +T A + + + L+
Sbjct: 203 LDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALL 262
Query: 328 NHPDVLQ 334
++P ++
Sbjct: 263 DNPGQIE 269
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+ +Q + + + +A+ +LL
Sbjct: 186 QAAREVVNFILDLVERRRT------EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 239
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVL 333
AG + + + L+ HPD L
Sbjct: 240 AGFEASVSLIGIGTYLLLTHPDQL 263
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 250 KISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLL 309
+ ++ + F LV+ RR E D ++ L+ +Q + + + +A+ +LL
Sbjct: 187 QAAREVVNFILDLVERRRT------EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 310 AGTDTTAVTMEWAMSNLVNHPDVL 333
AG + + + L+ HPD L
Sbjct: 241 AGFEASVSLIGIGTYLLLTHPDQL 264
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 297 DQTIKGLAMTMLLAGTDTTAVTME-WAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDL 355
D ++ AM + L T A W M L+ HP+ L+ E+ G +HL E
Sbjct: 250 DAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQ 306
Query: 356 SKLKYLHCIISETLRLYPTAPLLVPHRSSDD---CVVGG 391
++ ETLRL TA L+ + D C+ G
Sbjct: 307 KNTPVFDSVLWETLRL--TAAALITRDVTQDKKICLSNG 343
>pdb|3KB4|A Chain A, Crystal Structure Of The Alr8543 Protein In Complex With
Geranylgeranyl Monophosphate And Magnesium Ion From
Nostoc Sp. Pcc 7120, Northeast Structural Genomics
Consortium Target Nsr141
pdb|3KB4|B Chain B, Crystal Structure Of The Alr8543 Protein In Complex With
Geranylgeranyl Monophosphate And Magnesium Ion From
Nostoc Sp. Pcc 7120, Northeast Structural Genomics
Consortium Target Nsr141
pdb|3KB4|C Chain C, Crystal Structure Of The Alr8543 Protein In Complex With
Geranylgeranyl Monophosphate And Magnesium Ion From
Nostoc Sp. Pcc 7120, Northeast Structural Genomics
Consortium Target Nsr141
pdb|3KB4|D Chain D, Crystal Structure Of The Alr8543 Protein In Complex With
Geranylgeranyl Monophosphate And Magnesium Ion From
Nostoc Sp. Pcc 7120, Northeast Structural Genomics
Consortium Target Nsr141
Length = 225
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 323 MSNLVNHPDVLQKATAELD-THVGQQHLFDEPDLSK--LKYLHCIISETL 369
+S+++N PD LQK A L T G+Q D P L K L+ LH + + TL
Sbjct: 34 LSHVLNDPDTLQKVVAVLSLTPQGKQAFEDRPXLGKIDLEQLHQLPNYTL 83
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 258 FFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAV 317
+FQ L +ER NK + SM+ H + ++ P Y G + +++ G DTT
Sbjct: 220 YFQVLWNERVNKDPG--NDLISMLAHSPATRNMTPEEYL-----GNVLLLIVGGNDTTRN 272
Query: 318 TMEWAMSNLVNHPDVLQKATA 338
+M + L +PD K A
Sbjct: 273 SMTGGVLALHKNPDQFAKLKA 293
>pdb|3IZ3|B Chain B, Cryoem Structure Of Cytoplasmic Polyhedrosis Virus
pdb|3IZ3|C Chain C, Cryoem Structure Of Cytoplasmic Polyhedrosis Virus
pdb|3J17|B Chain B, Structure Of A Transcribing Cypovirus By Cryo-Electron
Microscopy
pdb|3J17|C Chain C, Structure Of A Transcribing Cypovirus By Cryo-Electron
Microscopy
Length = 1333
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D I R L +ANY R E V++ T + + NV +R V+ KRYF ++ LE + A R
Sbjct: 406 DHIIRCLMLAAANYPRLEGIIVQINTGYVA-SANV-IRPVSEKRYFPEN-LEQNQSAARL 462
Query: 216 KEIV 219
V
Sbjct: 463 VSAV 466
>pdb|3CNF|A Chain A, 3.88 Angstrom Structure Of Cytoplasmic Polyhedrosis Virus
By Cryo-Electron Microscopy
pdb|3CNF|B Chain B, 3.88 Angstrom Structure Of Cytoplasmic Polyhedrosis Virus
By Cryo-Electron Microscopy
pdb|3IZX|B Chain B, 3.1 Angstrom Cryoem Structure Of Cytoplasmic Polyhedrosis
Virus
pdb|3IZX|C Chain C, 3.1 Angstrom Cryoem Structure Of Cytoplasmic Polyhedrosis
Virus
Length = 1333
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 156 DEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRF 215
D I R L +ANY R E V++ T + + NV +R V+ KRYF ++ LE + A R
Sbjct: 406 DHIIRCLMLAAANYPRLEGIIVQINTGYVA-SANV-IRPVSEKRYFPEN-LEQNQSAARL 462
Query: 216 KEIV 219
V
Sbjct: 463 VSAV 466
>pdb|3VR6|A Chain A, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|B Chain B, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|C Chain C, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
Length = 600
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 234 HLPMLNWISNYEKRIVKISKRMDEFFQR 261
H P +NWI +Y ++ + MD+ Q+
Sbjct: 431 HFPSINWIQSYSLYSTEVGRYMDQILQQ 458
>pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From
Thermotoga Maritima At 2.05 A Resolution
Length = 341
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 EAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVN 148
E AQE F + A R K +S H+S+N + + P+ D +I ++E +S
Sbjct: 119 ETAQEAFIHHWSFIARRYKGISSTHLSFN--LINEPPFPD-----PQIXSVEDHNSLIKR 171
Query: 149 VFSPIRRDEIKRLL 162
+ IR+ + +RL+
Sbjct: 172 TITEIRKIDPERLI 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,174,741
Number of Sequences: 62578
Number of extensions: 429627
Number of successful extensions: 1235
Number of sequences better than 100.0: 120
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1044
Number of HSP's gapped (non-prelim): 163
length of query: 395
length of database: 14,973,337
effective HSP length: 101
effective length of query: 294
effective length of database: 8,652,959
effective search space: 2543969946
effective search space used: 2543969946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)