Query         046197
Match_columns 395
No_of_seqs    132 out of 1835
Neff          10.3
Searched_HMMs 46136
Date          Fri Mar 29 09:41:22 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046197hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.4E-66 2.9E-71  490.4  38.2  351   36-395    25-382 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-57 2.7E-62  444.4  38.0  360   34-395    54-423 (543)
  3 PLN02687 flavonoid 3'-monooxyg 100.0 3.3E-57 7.2E-62  439.8  38.3  358   32-395    29-393 (517)
  4 PLN03112 cytochrome P450 famil 100.0 2.3E-56   5E-61  434.4  39.8  363   30-395    25-392 (514)
  5 PLN03234 cytochrome P450 83B1; 100.0 1.6E-55 3.5E-60  427.2  37.6  354   34-395    25-384 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 4.1E-55 8.9E-60  423.0  37.7  354   35-395    29-385 (504)
  7 PLN02183 ferulate 5-hydroxylas 100.0 5.2E-55 1.1E-59  424.3  35.7  346   36-395    35-399 (516)
  8 PTZ00404 cytochrome P450; Prov 100.0   1E-54 2.2E-59  419.9  34.9  377    8-395     2-380 (482)
  9 PLN02394 trans-cinnamate 4-mon 100.0 4.9E-54 1.1E-58  417.3  36.8  353   36-395    29-389 (503)
 10 PLN00168 Cytochrome P450; Prov 100.0 7.5E-54 1.6E-58  416.5  38.0  352   35-395    33-403 (519)
 11 KOG0158 Cytochrome P450 CYP3/C 100.0 2.5E-54 5.5E-59  401.6  30.5  359   19-395    18-390 (499)
 12 PLN02966 cytochrome P450 83A1  100.0 1.7E-53 3.7E-58  412.6  36.5  353   35-395    27-387 (502)
 13 PLN02655 ent-kaurene oxidase   100.0 2.6E-53 5.7E-58  407.6  33.8  351   39-395     1-357 (466)
 14 PLN03018 homomethionine N-hydr 100.0 4.4E-52 9.6E-57  402.8  39.5  360   34-395    37-410 (534)
 15 PLN02290 cytokinin trans-hydro 100.0 1.4E-52   3E-57  408.1  30.9  343   38-395    43-410 (516)
 16 PLN02500 cytochrome P450 90B1  100.0 3.3E-51 7.2E-56  395.7  32.4  333   33-395    34-379 (490)
 17 PF00067 p450:  Cytochrome P450 100.0 1.9E-51   4E-56  395.5  19.8  349   39-395     1-358 (463)
 18 PLN02774 brassinosteroid-6-oxi 100.0 1.8E-49 3.9E-54  380.8  30.5  328   37-395    31-362 (463)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 1.4E-49 3.1E-54  361.9  27.8  351   34-395    47-412 (519)
 20 KOG0157 Cytochrome P450 CYP4/C 100.0 3.6E-49 7.9E-54  378.9  30.4  342   35-395    33-388 (497)
 21 PLN02196 abscisic acid 8'-hydr 100.0 1.5E-48 3.2E-53  374.2  31.8  329   32-395    30-362 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 8.7E-49 1.9E-53  381.2  29.3  346   39-395    32-408 (516)
 23 PLN02302 ent-kaurenoic acid ox 100.0 6.2E-48 1.3E-52  374.0  34.3  337   33-395    38-386 (490)
 24 PLN02738 carotene beta-ring hy 100.0 7.6E-48 1.6E-52  377.6  30.9  334   48-395   142-485 (633)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 7.8E-48 1.7E-52  368.5  30.0  332   35-395     5-350 (452)
 26 PLN02169 fatty acid (omega-1)- 100.0 2.5E-47 5.5E-52  368.1  32.1  339   39-395    33-391 (500)
 27 PLN02987 Cytochrome P450, fami 100.0 1.3E-46 2.9E-51  359.9  31.1  332   33-395    26-365 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-46 2.5E-51  363.3  29.3  340   38-395    13-373 (489)
 29 PLN02426 cytochrome P450, fami 100.0 5.1E-43 1.1E-47  337.8  32.4  331   45-395    49-390 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.5E-39 5.5E-44  288.1  24.4  333   37-395    31-373 (486)
 31 PLN02648 allene oxide synthase 100.0 2.3E-39 5.1E-44  308.1  20.0  321   36-395    16-373 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.2E-33 4.7E-38  264.0  25.7  288   58-395    24-315 (411)
 33 PF12554 MOZART1:  Mitotic-spin  79.8     5.4 0.00012   24.7   4.3   43  299-341     6-48  (48)
 34 PF05952 ComX:  Bacillus compet  61.4     7.9 0.00017   25.0   2.1   23  322-344     5-27  (57)
 35 PF14129 DUF4296:  Domain of un  59.3      43 0.00092   23.8   5.9   48  297-344    31-78  (87)
 36 PF07172 GRP:  Glycine rich pro  47.5      18 0.00039   26.3   2.4   20    1-20      1-20  (95)
 37 PF13893 RRM_5:  RNA recognitio  46.0      54  0.0012   20.6   4.4   36   62-97      1-40  (56)
 38 KOG0114 Predicted RNA-binding   40.4      57  0.0012   24.1   3.9   60   36-97     11-76  (124)
 39 PF15330 SIT:  SHP2-interacting  39.3      93   0.002   23.2   5.1   11   44-54     45-55  (107)
 40 PF14483 Cut8_M:  Cut8 dimerisa  38.8      50  0.0011   19.3   2.9   12  327-338    24-35  (38)
 41 PF11057 Cortexin:  Cortexin of  38.3      44 0.00096   22.7   2.9   23    2-24     26-48  (81)
 42 PF15300 INT_SG_DDX_CT_C:  INTS  35.7      15 0.00033   24.5   0.4   15  357-371    39-53  (65)
 43 TIGR00589 ogt O-6-methylguanin  34.4      31 0.00066   24.2   1.8   60  331-392     2-66  (80)
 44 PF02468 PsbN:  Photosystem II   33.6      95  0.0021   18.8   3.5   22    1-23      1-22  (43)
 45 PF05814 DUF843:  Baculovirus p  29.6      65  0.0014   22.5   2.7   22    6-27     24-45  (83)
 46 COG0851 MinE Septum formation   27.0 1.1E+02  0.0023   21.8   3.4   18  329-346    35-52  (88)
 47 cd01646 RT_Bac_retron_I RT_Bac  25.0 2.6E+02  0.0055   22.2   6.0   57   34-95     50-106 (158)
 48 PRK00901 methylated-DNA--prote  23.8      46   0.001   26.7   1.4   61  330-392    72-137 (155)
 49 PF10454 DUF2458:  Protein of u  23.4   1E+02  0.0022   24.6   3.3   28  314-341     7-34  (150)
 50 PF13625 Helicase_C_3:  Helicas  23.2 2.3E+02  0.0049   21.7   5.2   39   58-98     76-114 (129)
 51 PRK13467 F0F1 ATP synthase sub  23.0 1.2E+02  0.0025   20.4   2.9   24  316-339    20-43  (66)
 52 COG4471 Uncharacterized protei  22.5 2.1E+02  0.0046   20.4   4.2   33   65-97     21-53  (90)
 53 PF10717 ODV-E18:  Occlusion-de  22.1 2.8E+02  0.0062   19.5   4.7   20    8-27     26-45  (85)
 54 PF01035 DNA_binding_1:  6-O-me  21.1      33 0.00072   24.3   0.1   60  331-392     2-66  (85)
 55 COG3954 PrkB Phosphoribulokina  21.1   2E+02  0.0042   24.1   4.4   62  309-370    15-88  (289)
 56 PRK02302 hypothetical protein;  20.9 2.2E+02  0.0048   20.4   4.1   31   67-97     24-54  (89)
 57 PF07849 DUF1641:  Protein of u  20.8 1.1E+02  0.0023   18.3   2.2   19  320-338    13-31  (42)
 58 PF08285 DPM3:  Dolichol-phosph  20.5 1.2E+02  0.0025   21.9   2.7   29  316-344    53-81  (91)
 59 COG3660 Predicted nucleoside-d  20.1 1.5E+02  0.0032   26.2   3.7   49   41-89    128-180 (329)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-66  Score=490.37  Aligned_cols=351  Identities=46%  Similarity=0.773  Sum_probs=309.3

Q ss_pred             CCCCCCCCCCccccccccCCCc-chHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCc-ccccc
Q 046197           36 KNLPPSPPCMPVIGHLHLIKPP-THRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKS-LSGKH  113 (395)
Q Consensus        36 ~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~-~~~~~  113 (395)
                      .++||||+++|++||++++... +|+.+++++++|||++++|+|+.++|+|+++++++|+|++++..|++||.. ...+.
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            6789999999999999999765 999999999999999999999999999999999999999999999999982 24466


Q ss_pred             cccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHH
Q 046197          114 ISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMR  193 (395)
Q Consensus       114 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~  193 (395)
                      +.+++.+++++.+|+.||.+||+....+++....+.......++++.+++.+.+  .... .++|+...+..++.|||++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~--~~~~-~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK--SKKG-EPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh--cCCC-ceeeHHHHHHHHHHHHHHH
Confidence            777788889988999999999999999999999988888778999999999864  2223 7999999999999999999


Q ss_pred             HHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccc-ccccc---ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046197          194 IVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLP-MLNWI---SNYEKRIVKISKRMDEFFQRLVDERRNK  269 (395)
Q Consensus       194 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~  269 (395)
                      ++||.++...+    ++....+.+++.+.+...+.....+++| ++.|+   .+..++......+++.++++.|+++++.
T Consensus       182 ~~fG~rf~~~~----~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  182 MLFGRRFEEED----EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHhCCccccCC----chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999996542    2445568888888888888877888888 45554   3566777777777999999999999875


Q ss_pred             hhhccCCCCCHHHHHHhcccCCCCC-CCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCC
Q 046197          270 KEACLENTDSMIDHLLSLQHSEPHY-YTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQH  348 (395)
Q Consensus       270 ~~~~~~~~~d~~~~ll~~~~~~~~~-~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~  348 (395)
                      . .. ++..|++|.|+...+++... +++++|...+.++++||+||||+|+.|++.+|++||+||+|+++||++++|.++
T Consensus       258 ~-~~-~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r  335 (489)
T KOG0156|consen  258 I-GD-EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGR  335 (489)
T ss_pred             h-cc-CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            4 12 23389999999887644323 999999999999999999999999999999999999999999999999999887


Q ss_pred             ccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          349 LFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       349 ~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      .++.+|+.+||||+|||+||+|+||++|+.+||.+.+||+++||.||
T Consensus       336 ~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IP  382 (489)
T KOG0156|consen  336 LVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIP  382 (489)
T ss_pred             CCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcC
Confidence            79999999999999999999999999999999999999999999998


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.2e-57  Score=444.38  Aligned_cols=360  Identities=27%  Similarity=0.468  Sum_probs=276.1

Q ss_pred             CCCCCCCCCCCCccccccccCC-Cc-chHHHHHHHHhcC-CeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccc
Q 046197           34 GYKNLPPSPPCMPVIGHLHLIK-PP-THRFLYNLSKQYG-PIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLS  110 (395)
Q Consensus        34 ~~~~~ppgp~~~p~lG~~~~~~-~~-~~~~~~~~~~~yG-~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  110 (395)
                      ++.++||||+++|++||++++. +. .+.++.++.++|| +++++++|+.++|+++||+.++++|++++..|.+|+....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            3457899999999999998873 33 3678899999999 8999999999999999999999999999888988876443


Q ss_pred             ccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHH
Q 046197          111 GKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINV  190 (395)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dv  190 (395)
                      ...++.+..+++++.+|+.|+++||+++.++++...++.+.+.++++++.+++.+.+.  ...++++|+.+.+.++++|+
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM--VKNSEPVDLRFVTRHYCGNA  211 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCceehHHHHHHHHHHH
Confidence            3333333334577789999999999998778887777778888888888888877542  12345799999999999999


Q ss_pred             HHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhh---CCCCccccccccccc--ccHHHHHHHHHHHHHHHHHHHHHH
Q 046197          191 MMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALS---GTSNPGDHLPMLNWI--SNYEKRIVKISKRMDEFFQRLVDE  265 (395)
Q Consensus       191 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~  265 (395)
                      |++++||.++...+....++....+.+.++..+...   ....+.+.+|++.++  .++.+......+.+.+++.++|++
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987632110000000111122222222211   111233455655443  233344555567788888889988


Q ss_pred             HHhhhhhcc-CCCCCHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhh
Q 046197          266 RRNKKEACL-ENTDSMIDHLLSLQHSEPH-YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTH  343 (395)
Q Consensus       266 ~~~~~~~~~-~~~~d~~~~ll~~~~~~~~-~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~  343 (395)
                      +++....+. ....|+++.|++..++++. .++++++.+++.++++||+||||++++|++++|++||+||+|+++||+++
T Consensus       292 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        292 RIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            765322111 1246999999986543222 48999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          344 VGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       344 ~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +|.+..++++++++|||++|||+||||+||++|+.+||.+.+|++++||.||
T Consensus       372 ~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~Ip  423 (543)
T PLN02971        372 VGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIP  423 (543)
T ss_pred             hCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEEC
Confidence            9877789999999999999999999999999998889999999999999998


No 3  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.3e-57  Score=439.81  Aligned_cols=358  Identities=37%  Similarity=0.693  Sum_probs=287.6

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccc
Q 046197           32 RRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSG  111 (395)
Q Consensus        32 ~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  111 (395)
                      +.+..+.||||.++|++||++++..+++..+.+++++||++|++++|+.++|+++||++++++++++...|.+|+.....
T Consensus        29 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         29 GKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            33445689999999999999888767889999999999999999999999999999999999999887788887654333


Q ss_pred             cccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHH
Q 046197          112 KHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVM  191 (395)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi  191 (395)
                      ..+...+.+++++.+|+.|+++||.++.++|+..+++.+.+.+.++++.+++.|.+.   ..++++|+.+.+..+++|+|
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ---HGTAPVNLGQLVNVCTTNAL  185 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh---cCCCceeHHHHHHHHHHHHH
Confidence            333333346677778999999999997578999999999999999999999999642   12467999999999999999


Q ss_pred             HHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046197          192 MRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI--SNYEKRIVKISKRMDEFFQRLVDERRNK  269 (395)
Q Consensus       192 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~  269 (395)
                      +.++||.++.+.+.   +.....+.+.+..++...........+|++.|+  ....++..+..+.+.+++.++++++++.
T Consensus       186 ~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        186 GRAMVGRRVFAGDG---DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHhCccccccCC---cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998754321   122234555555555433322222445655544  2223455566777888899999888764


Q ss_pred             hhhccCCCCCHHHHHHhcccC-----CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          270 KEACLENTDSMIDHLLSLQHS-----EPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       270 ~~~~~~~~~d~~~~ll~~~~~-----~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      .........|+++.++...++     ++..++++++.+++.++++||+||||++++|++++|++||++|+|+++||++++
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        263 GQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            321123457999999976532     234599999999999999999999999999999999999999999999999998


Q ss_pred             cCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          345 GQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       345 ~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +..+.++++++++|||++|||+||||+||++|..++|.+.+|++++||.||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip  393 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIP  393 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEEC
Confidence            876778999999999999999999999999998789999999999999998


No 4  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.3e-56  Score=434.41  Aligned_cols=363  Identities=35%  Similarity=0.644  Sum_probs=288.5

Q ss_pred             cCCCCCCCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc
Q 046197           30 GRRRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSL  109 (395)
Q Consensus        30 ~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~  109 (395)
                      +++++..+.||||+++|++||++++..+++..+.+++++||++|++++|+.++|+++||+++++|+.++...|++++...
T Consensus        25 ~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~  104 (514)
T PLN03112         25 ASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL  104 (514)
T ss_pred             ccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence            45566678899999999999998887778999999999999999999999999999999999999998887888776543


Q ss_pred             cccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHH
Q 046197          110 SGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTIN  189 (395)
Q Consensus       110 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d  189 (395)
                      .......+.+.++++.+|+.|+.+||.+..++|+..+++.+.+.+.++++.+++.+.+.  ...++++|+.+.+.++++|
T Consensus       105 ~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~~~vd~~~~~~~~~~~  182 (514)
T PLN03112        105 AAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA--AQTGKPVNLREVLGAFSMN  182 (514)
T ss_pred             cceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh--hccCCeeeHHHHHHHHHHH
Confidence            22222223344566778999999999976678999999999999999999999987543  1234689999999999999


Q ss_pred             HHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHH
Q 046197          190 VMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI--SNYEKRIVKISKRMDEFFQRLVDERR  267 (395)
Q Consensus       190 vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~  267 (395)
                      ++++++||.++.+.... .......+.+++..++...........+|.+.|+  ....++..+..+.+.+++.+++++++
T Consensus       183 vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  261 (514)
T PLN03112        183 NVTRMLLGKQYFGAESA-GPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHR  261 (514)
T ss_pred             HHHHHHcCCcccccccc-chHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987433211 1122344666666555433222233345555443  12335566677888889999998877


Q ss_pred             hhhhhc--cCCCCCHHHHHHhcccCCC-CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          268 NKKEAC--LENTDSMIDHLLSLQHSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       268 ~~~~~~--~~~~~d~~~~ll~~~~~~~-~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      +.....  .....|+++.+++...+++ ..++++++.+++.++++||+||||++++|++++|++||++|+|+++||++++
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~  341 (514)
T PLN03112        262 RARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVV  341 (514)
T ss_pred             HhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhc
Confidence            643211  1234689999998643322 2489999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          345 GQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       345 ~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++.+.++++++++|||++|||+||||+||++|..++|.+.+|++++||.||
T Consensus       342 ~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IP  392 (514)
T PLN03112        342 GRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIP  392 (514)
T ss_pred             CCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeC
Confidence            876778999999999999999999999999998788999999999999998


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.6e-55  Score=427.19  Aligned_cols=354  Identities=32%  Similarity=0.588  Sum_probs=277.5

Q ss_pred             CCCCCCCCCCCCccccccccCCC-cchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccc
Q 046197           34 GYKNLPPSPPCMPVIGHLHLIKP-PTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGK  112 (395)
Q Consensus        34 ~~~~~ppgp~~~p~lG~~~~~~~-~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  112 (395)
                      +..+.||||+++|++||++++.. +++.++.+++++||++|++++|+.++|+++|||++++|+.+++..|..|+......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            33467999999999999988853 67889999999999999999999999999999999999998887888776432211


Q ss_pred             ccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHH
Q 046197          113 HISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMM  192 (395)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~  192 (395)
                      .+......+.+..+|+.|+++||.+..++|+..++..+.+.+.++++.+++.|.+.  ...++++|+.+.+..+++|+++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~~vd~~~~~~~~t~dvi~  182 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA--ADQSGTVDLSELLLSFTNCVVC  182 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh--ccCCCeEEHHHHHHHHHHHHHH
Confidence            11211222334456889999999865688999999999999999999999999643  2345689999999999999999


Q ss_pred             HHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccc---cccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046197          193 RIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNW---ISNYEKRIVKISKRMDEFFQRLVDERRNK  269 (395)
Q Consensus       193 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  269 (395)
                      .++||.++...+     .....+.+.+.+.+...........+|++.+   +.+..++..++.+++++++.++|+++++.
T Consensus       183 ~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (499)
T PLN03234        183 RQAFGKRYNEYG-----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP  257 (499)
T ss_pred             HHHhCCcccccc-----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999998874221     1223344444443332222222233444322   22334566778888999999999887653


Q ss_pred             hhhccCCCCCHHHHHHhcccCC--CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCC
Q 046197          270 KEACLENTDSMIDHLLSLQHSE--PHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ  347 (395)
Q Consensus       270 ~~~~~~~~~d~~~~ll~~~~~~--~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~  347 (395)
                      .. .....+|+++.+++...++  +..++++++.+++.++++||+||||++++|++++|++||++|+|+++||++++|+.
T Consensus       258 ~~-~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~  336 (499)
T PLN03234        258 NR-PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK  336 (499)
T ss_pred             cc-cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            21 1223568999888654332  23589999999999999999999999999999999999999999999999999877


Q ss_pred             CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          348 HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       348 ~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +.++++|+++|||++|||+|+||+|||+|..++|++.+|++++||.||
T Consensus       337 ~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP  384 (499)
T PLN03234        337 GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIP  384 (499)
T ss_pred             CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEEC
Confidence            778999999999999999999999999998778999999999999998


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.1e-55  Score=422.95  Aligned_cols=354  Identities=29%  Similarity=0.570  Sum_probs=282.8

Q ss_pred             CCCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccccc
Q 046197           35 YKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHI  114 (395)
Q Consensus        35 ~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~  114 (395)
                      ..+.||||+++|++||++.+...++.++.+++++||++|++++|+.++|+++||++++++++++...|.+|+........
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~  108 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHL  108 (504)
T ss_pred             cCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhh
Confidence            34579999999999999888766889999999999999999999999999999999999999888788887754322222


Q ss_pred             ccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHH
Q 046197          115 SYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRI  194 (395)
Q Consensus       115 ~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~  194 (395)
                      ..+.++++++.+|+.|+++||.+++++|+..+++.+.+.+.+++..+++.+.+.  ...++++|+.+.+..+++|+|+.+
T Consensus       109 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~--~~~g~~~~~~~~~~~~~~~vi~~~  186 (504)
T PLN00110        109 AYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL--SQRGEPVVVPEMLTFSMANMIGQV  186 (504)
T ss_pred             ccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh--ccCCCcEeHHHHHHHHHHHHHHHH
Confidence            223345677788999999999997678999999999999999999999998643  224568999999999999999999


Q ss_pred             HhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 046197          195 VAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI--SNYEKRIVKISKRMDEFFQRLVDERRNKKEA  272 (395)
Q Consensus       195 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (395)
                      +||.++....    ......+.+++...+.......+...+|++.|+  ..+.+...+..+.+.+++.+.++++++... 
T Consensus       187 ~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  261 (504)
T PLN00110        187 ILSRRVFETK----GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH-  261 (504)
T ss_pred             HhCCcccccC----chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            9998863221    112234555555554433222233455655543  233345555677788888888887765321 


Q ss_pred             ccCCCCCHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCccC
Q 046197          273 CLENTDSMIDHLLSLQHS-EPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFD  351 (395)
Q Consensus       273 ~~~~~~d~~~~ll~~~~~-~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  351 (395)
                      ......|+++.++..... ++..++++++.+++.++++||+||||++++|++++|++||++|+|+++|++++++....++
T Consensus       262 ~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~  341 (504)
T PLN00110        262 ERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLV  341 (504)
T ss_pred             ccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            112346899999976432 3446999999999999999999999999999999999999999999999999998766789


Q ss_pred             CCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          352 EPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       352 ~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++++++|||++|||+||||+||++|+.+||.+.+|++++||.||
T Consensus       342 ~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip  385 (504)
T PLN00110        342 ESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIP  385 (504)
T ss_pred             HHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEEC
Confidence            99999999999999999999999998789999999999999998


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.2e-55  Score=424.33  Aligned_cols=346  Identities=34%  Similarity=0.604  Sum_probs=271.4

Q ss_pred             CCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccccc
Q 046197           36 KNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHIS  115 (395)
Q Consensus        36 ~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~  115 (395)
                      .++||||+++|++|+++++....+.++.+++++||++|++++|+.++|+++||+++++|+.+++..|+.|+.........
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~  114 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLT  114 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccc
Confidence            46799999999999998876556788999999999999999999999999999999999998877788777543222222


Q ss_pred             cCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHH
Q 046197          116 YNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIV  195 (395)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~  195 (395)
                      .+..+++++.+|+.|+++||.+..++|+...++.+.+. .++++.+++.|.+    ..++++|+.+.+.++++|++++++
T Consensus       115 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~----~~~~~v~~~~~~~~~~~~vi~~~~  189 (516)
T PLN02183        115 YDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS----NIGKPVNIGELIFTLTRNITYRAA  189 (516)
T ss_pred             cCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh----cCCCcEeHHHHHHHHHHHHHHhHh
Confidence            22345677788999999999965578999888888875 4678999998843    234689999999999999999999


Q ss_pred             hcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 046197          196 AGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI--SNYEKRIVKISKRMDEFFQRLVDERRNKKEAC  273 (395)
Q Consensus       196 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (395)
                      ||.+....        ...+.+.+...............+|++.++  ....++..+..+.+.+++.++|++++++....
T Consensus       190 fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (516)
T PLN02183        190 FGSSSNEG--------QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQ  261 (516)
T ss_pred             hcCcccch--------HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99865211        123444444433322222233445555443  12334566667788888888888776532211


Q ss_pred             ------cCCCCCHHHHHHhcccCC-----------CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHH
Q 046197          274 ------LENTDSMIDHLLSLQHSE-----------PHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKA  336 (395)
Q Consensus       274 ------~~~~~d~~~~ll~~~~~~-----------~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl  336 (395)
                            ....+|+++.+++...++           +..++++++.+++.++++||+||||++++|++++|++||++|+|+
T Consensus       262 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl  341 (516)
T PLN02183        262 NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRV  341 (516)
T ss_pred             ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence                  112468999998753221           235899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          337 TAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       337 ~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++||++++|..+.++++++++|||++|||+||||+|||+|+. +|.+.+|++++||.||
T Consensus       342 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IP  399 (516)
T PLN02183        342 QQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIP  399 (516)
T ss_pred             HHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEEC
Confidence            999999998666789999999999999999999999999987 5999999999999998


No 8  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1e-54  Score=419.88  Aligned_cols=377  Identities=23%  Similarity=0.362  Sum_probs=278.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCC
Q 046197            8 ILYACVSFLFVIIALKKLFQFKGRRRGYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSS   87 (395)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~   87 (395)
                      +++.++++++++.+++..++..  ++...+.+|||+++|++||++++..+++..+.+++++|||+|++++|+.++|+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~   79 (482)
T PTZ00404          2 MLFNIILFLFIFYIIHNAYKKY--KKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSD   79 (482)
T ss_pred             chHHHHHHHHHHHHHHHHHHHh--hhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECC
Confidence            3555555655555554444322  22334568999999999999888777899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCcccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHh
Q 046197           88 FEAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSA  167 (395)
Q Consensus        88 p~~~~~il~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  167 (395)
                      |+++++|+.++...|..|+.........  .+..+++.+|+.|+++||+++ +.|+..+++.+.+.+.+.++.+++.|.+
T Consensus        80 p~~~~~il~~~~~~~~~r~~~~~~~~~~--~~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~  156 (482)
T PTZ00404         80 PILIREMFVDNFDNFSDRPKIPSIKHGT--FYHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKK  156 (482)
T ss_pred             HHHHHHHHHhcchhhcCCCCcceeeeec--cCCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHH
Confidence            9999999998776777776543221111  123455678999999999996 7788888999999999999999999964


Q ss_pred             hhcccCCceeeHHHHHHHHHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc-ccHHH
Q 046197          168 NYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI-SNYEK  246 (395)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~  246 (395)
                      .  .+.++.+|+.+.+.++++|+|++++||.++...+... ......+.+.+..++...........++++... ..+.+
T Consensus       157 ~--~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (482)
T PTZ00404        157 I--ESSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIH-NGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLE  233 (482)
T ss_pred             H--HhcCCccCHHHHHHHHHHHHHHHHHhccccccccccc-hhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHH
Confidence            2  2234579999999999999999999998874321110 112234555555554433222222222222111 11222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q 046197          247 RIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNL  326 (395)
Q Consensus       247 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L  326 (395)
                      ...+..+.+.+++.+.++++++..  .....+|+++.+++...+. .....+++++++.++++||+||||++++|++++|
T Consensus       234 ~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L  310 (482)
T PTZ00404        234 HTDKNFKKIKKFIKEKYHEHLKTI--DPEVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLML  310 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcc--CCCCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence            233445667777777776655432  1223578999999764321 1122235889999999999999999999999999


Q ss_pred             hhCcHHHHHHHHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCcccee-cceeCC
Q 046197          327 VNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVV-GGFDVP  395 (395)
Q Consensus       327 ~~~P~vq~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i-~g~~IP  395 (395)
                      ++||++|+|+++||++++++.+.++++++++|||++|||+||||+|||+|+.++|.+.+|+++ +||.||
T Consensus       311 ~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip  380 (482)
T PTZ00404        311 CNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIP  380 (482)
T ss_pred             HcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEEC
Confidence            999999999999999999876678999999999999999999999999998779999999999 999998


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.9e-54  Score=417.25  Aligned_cols=353  Identities=31%  Similarity=0.521  Sum_probs=264.1

Q ss_pred             CCCCCCCCCCccccccccCCCc-chHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccccc
Q 046197           36 KNLPPSPPCMPVIGHLHLIKPP-THRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHI  114 (395)
Q Consensus        36 ~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~  114 (395)
                      .+.||||+++|++|+++++..+ .+..+.+++++||++|++++|++++|+++||+.+++|+.+++..|.++++......+
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~  108 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIF  108 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHh
Confidence            4579999999999999888543 578999999999999999999999999999999999999877777777643332322


Q ss_pred             ccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHH
Q 046197          115 SYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRI  194 (395)
Q Consensus       115 ~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~  194 (395)
                      ...+.+.+++.+|+.|+++||.+..++|+...++.+.+.+.++++.+++.|.+. ....++.+++.+.+.++++|+++++
T Consensus       109 ~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~-~~~~~~~v~~~~~~~~~~~dvi~~~  187 (503)
T PLN02394        109 TGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRAN-PEAATEGVVIRRRLQLMMYNIMYRM  187 (503)
T ss_pred             ccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHh-hhccCCcEecHHHHHHHHHHHHHHH
Confidence            222335677788999999999986688999889999999999999999999653 2222346899999999999999999


Q ss_pred             HhcccccCCCCcccHHHHHHHHHHHHHHHHhhCC--CCccccccccccc-ccHHHHHHHHHHH-HHHHHHHHHHHHHhhh
Q 046197          195 VAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGT--SNPGDHLPMLNWI-SNYEKRIVKISKR-MDEFFQRLVDERRNKK  270 (395)
Q Consensus       195 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~  270 (395)
                      +||.++...+    +.....+.............  ......+|++.+. ..+.+........ ...+...+++++++..
T Consensus       188 ~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        188 MFDRRFESED----DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HhCCCccccc----chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999874321    11112222222222222111  1122334433221 1222222222222 2223344566655422


Q ss_pred             hh---ccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCC
Q 046197          271 EA---CLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ  347 (395)
Q Consensus       271 ~~---~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~  347 (395)
                      ..   ..+...|+++.|++...+  +.++++++..++.++++||+||||++++|++|+|++||++|+|+++||+++++.+
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             hhccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            11   112346899999987543  3489999999999999999999999999999999999999999999999999876


Q ss_pred             CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          348 HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       348 ~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +.++++++++|||++|||+||||++|++|...+|.+.+|++++||.||
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP  389 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIP  389 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeC
Confidence            678899999999999999999999999999889999999999999998


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7.5e-54  Score=416.50  Aligned_cols=352  Identities=28%  Similarity=0.476  Sum_probs=270.3

Q ss_pred             CCCCCCCCCCCccccccccCC---CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccc
Q 046197           35 YKNLPPSPPCMPVIGHLHLIK---PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSG  111 (395)
Q Consensus        35 ~~~~ppgp~~~p~lG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  111 (395)
                      ..++||||+++|++||++.+.   ..++..+.+++++||++|++++|+.+.|+++||+++++++.+++..|.+|+.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            346899999999999987653   34678899999999999999999999999999999999999988888887764332


Q ss_pred             cccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHH
Q 046197          112 KHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVM  191 (395)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi  191 (395)
                      ..++.+...+.+..+|+.|+++||.+..++|+..+++.+.+.+.++++.+++.|.+.  ...++.+|+.+.+..++++++
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE--AEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCcCHHHHHHHHHHHHH
Confidence            222222122222368999999998655689999999999999999999999999643  223346899999999999999


Q ss_pred             HHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhh-CCCCcccccccccc-c-ccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046197          192 MRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALS-GTSNPGDHLPMLNW-I-SNYEKRIVKISKRMDEFFQRLVDERRN  268 (395)
Q Consensus       192 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~-~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  268 (395)
                      +.++||.++...       ....+........... ....+...+|.+.+ + ....++..+..+.+.+++.++|+++++
T Consensus       191 ~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        191 VLMCFGERLDEP-------AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHcCCCcChh-------hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999876321       1122323322222111 11222344554422 1 122234556677888899999988765


Q ss_pred             hhhh---cc-------CCCCCHHHHHHhccc--CCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHH
Q 046197          269 KKEA---CL-------ENTDSMIDHLLSLQH--SEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKA  336 (395)
Q Consensus       269 ~~~~---~~-------~~~~d~~~~ll~~~~--~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl  336 (395)
                      ....   +.       ....|+++.|++...  +++..++++++.+++.++++||+||||++++|++++|++||++|+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            3210   00       014589999997643  22345999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCC-CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          337 TAELDTHVGQQ-HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       337 ~~Ei~~~~~~~-~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++||+++++.. +.++++++++|||++|||+||||+||++|..++|.+.+|++++||.||
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip  403 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIP  403 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEEC
Confidence            99999998753 567999999999999999999999999999889999999999999998


No 11 
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.5e-54  Score=401.55  Aligned_cols=359  Identities=28%  Similarity=0.406  Sum_probs=261.9

Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCccccccccCC--CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHH
Q 046197           19 IIALKKLFQFKGRRRGYKNLPPSPPCMPVIGHLHLIK--PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFT   96 (395)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~   96 (395)
                      +.++++-+.+|.++ +    .|+|+++|++||+..+.  +.+.....+...+|||+++++.|..|.++|+|||.+++|++
T Consensus        18 y~~~~~~~~yw~rr-G----i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~i   92 (499)
T KOG0158|consen   18 YLWLRWTYSYWRRR-G----IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILI   92 (499)
T ss_pred             HHHHHhhhhhhccC-C----CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHH
Confidence            33334444455444 2    67888899999998772  22355555555556999999999999999999999999999


Q ss_pred             hCCccccCCCCcccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCce
Q 046197           97 KNDVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSK  176 (395)
Q Consensus        97 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  176 (395)
                      ++..+|.+|......+.........+|+..|+.||+.|..++ +.|+..+++.+.|.+++.++.+++.+.+. ... +..
T Consensus        93 k~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~-~~~-~~~  169 (499)
T KOG0158|consen   93 KDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRK-SEG-GQE  169 (499)
T ss_pred             HhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHh-hcc-cCC
Confidence            999999885422222221111224567788999999999996 89999999999999999999999999764 221 257


Q ss_pred             eeHHHHHHHHHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHh-hCCCC----cccccccccccccHHHHHHHH
Q 046197          177 VELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFAL-SGTSN----PGDHLPMLNWISNYEKRIVKI  251 (395)
Q Consensus       177 ~~~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~p~~~~~~~~~~~~~~~  251 (395)
                      +++.+.+.++|.|||++++||.+......     ....|.......+.. .....    ....+|.+...    -+....
T Consensus       170 ~~~~dl~~~yT~DVI~~~AfG~~~~s~~d-----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~----l~~~~~  240 (499)
T KOG0158|consen  170 GEIKDLCARYTTDVIGSCAFGLDANSLRD-----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP----LRVKLF  240 (499)
T ss_pred             ccHHHHHHHHHHHHHhHhhcccchhhhcC-----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh----hhcccC
Confidence            88999999999999999999988754321     112333322222221 10000    11112222110    011122


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHhcccC--C---CC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q 046197          252 SKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHS--E---PH-YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSN  325 (395)
Q Consensus       252 ~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~--~---~~-~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~  325 (395)
                      .....+++.+++.++.+.++..+..+.|+++.++++..+  .   .. .+|.++|++++..|++||+||||+|+++++|+
T Consensus       241 ~~~~~~~~~~~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYe  320 (499)
T KOG0158|consen  241 PEDVTDFFRKLVNSRVEQREKENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYE  320 (499)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence            234445555555554443333345688999999988743  1   11 49999999999999999999999999999999


Q ss_pred             HhhCcHHHHHHHHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceec-ceeCC
Q 046197          326 LVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVG-GFDVP  395 (395)
Q Consensus       326 L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~-g~~IP  395 (395)
                      ||+||++|+||||||++++.+...+++|.+++|+||++||+||||+||++|.. -|+|.+|++++ ||.||
T Consensus       321 LA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~  390 (499)
T KOG0158|consen  321 LAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIP  390 (499)
T ss_pred             HhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeC
Confidence            99999999999999999976655599999999999999999999999999984 69999999999 88876


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.7e-53  Score=412.64  Aligned_cols=353  Identities=32%  Similarity=0.564  Sum_probs=268.5

Q ss_pred             CCCCCCCCCCCccccccccC-CCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccc
Q 046197           35 YKNLPPSPPCMPVIGHLHLI-KPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKH  113 (395)
Q Consensus        35 ~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  113 (395)
                      ..+.||||+++|++||++++ ..+++..+.+++++||++|++++|+.++|+++||+++++|+.+++..|.+++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            34679999999999999887 44688999999999999999999999999999999999999987766765543222122


Q ss_pred             cccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHH
Q 046197          114 ISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMR  193 (395)
Q Consensus       114 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~  193 (395)
                      ...+.....+..+|+.|+.+||.+..++|+...+..+.+.+.+.++.+++.|.+.  ...++.+|+.+.+..+++|+|+.
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA--ADKSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCceeHHHHHHHHHHHHHHH
Confidence            2222233445567999999999955688999999999999999999999999643  23345799999999999999999


Q ss_pred             HHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc---ccHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046197          194 IVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI---SNYEKRIVKISKRMDEFFQRLVDERRNKK  270 (395)
Q Consensus       194 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (395)
                      ++||.++...+     .....+.+++...............+|++..+   ..+.+......+...+++.+.++++....
T Consensus       185 ~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        185 QAFGKKYNEDG-----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHhCCccCccc-----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99998874321     12233444444433322222222334432211   22222233344556677777776654321


Q ss_pred             hhccCCCCCHHHHHHhcccCC--CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCC-
Q 046197          271 EACLENTDSMIDHLLSLQHSE--PHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ-  347 (395)
Q Consensus       271 ~~~~~~~~d~~~~ll~~~~~~--~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~-  347 (395)
                      . ...+..|+++.++...+++  +..++++++.+++.++++||+||||++++|++++|++||++|+|+++||+++++.. 
T Consensus       260 ~-~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  338 (502)
T PLN02966        260 R-VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG  338 (502)
T ss_pred             c-cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC
Confidence            1 1123468999988765432  23589999999999999999999999999999999999999999999999998742 


Q ss_pred             -CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          348 -HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       348 -~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                       ..++++|+++|||++|||+|+||+||++|..++|.+.+|++++||.||
T Consensus       339 ~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP  387 (502)
T PLN02966        339 STFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIP  387 (502)
T ss_pred             CCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEEC
Confidence             357899999999999999999999999998778999999999999998


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.6e-53  Score=407.60  Aligned_cols=351  Identities=28%  Similarity=0.436  Sum_probs=270.3

Q ss_pred             CCCCCCCccccccccCC-CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccccccC
Q 046197           39 PPSPPCMPVIGHLHLIK-PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHISYN  117 (395)
Q Consensus        39 ppgp~~~p~lG~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~  117 (395)
                      ||||+++|++||++++. .+++..+.+++++||++|++++|+.++|+++||+++++|++++...|.+|+.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999999884 55889999999999999999999999999999999999999988888877643322222222


Q ss_pred             CeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHHhc
Q 046197          118 YTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAG  197 (395)
Q Consensus       118 ~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~fg  197 (395)
                      ...+.+..+|+.|+++||.+.+++|+...++.+.+.+++.++.+++.+.+......++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22334445699999999988778898888888889899999998888865322224567999999999999999999999


Q ss_pred             ccccCCC---CcccHHHHHHHHHHHHHHHHhhCCCCccccccccccccc--HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 046197          198 KRYFGDD---VLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISN--YEKRIVKISKRMDEFFQRLVDERRNKKEA  272 (395)
Q Consensus       198 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (395)
                      .++...+   ..........+.+.+..++.........+.+|++.|+..  +.+...+....+..++++++++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8864321   100000112344444444433322223345666555421  22223333344567777888777654221


Q ss_pred             ccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCccCC
Q 046197          273 CLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDE  352 (395)
Q Consensus       273 ~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  352 (395)
                       .+...|+++.++....    .++++++.+++.++++||+||||++++|++++|++||++|+|+++||++++|+.. +++
T Consensus       241 -~~~~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~  314 (466)
T PLN02655        241 -GEERDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTE  314 (466)
T ss_pred             -CCCcccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCH
Confidence             2234689999997642    4899999999999999999999999999999999999999999999999988644 899


Q ss_pred             CCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          353 PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       353 ~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +++++|||++|||+||||++||+|...||.+.+|++++||.||
T Consensus       315 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip  357 (466)
T PLN02655        315 EDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIP  357 (466)
T ss_pred             HHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEEC
Confidence            9999999999999999999999999888999999999999998


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.4e-52  Score=402.81  Aligned_cols=360  Identities=24%  Similarity=0.431  Sum_probs=264.8

Q ss_pred             CCCCCCCCCCCCccccccccCC-Ccc-hHHHHHHHHhc-CCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccc
Q 046197           34 GYKNLPPSPPCMPVIGHLHLIK-PPT-HRFLYNLSKQY-GPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLS  110 (395)
Q Consensus        34 ~~~~~ppgp~~~p~lG~~~~~~-~~~-~~~~~~~~~~y-G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  110 (395)
                      +..++||||+++|++||++++. ..+ ..++++..++| |+|+++++|+.++|+++||+.++++|++++..|++|+....
T Consensus        37 ~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         37 RSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            3445899999999999999873 333 24566666665 79999999999999999999999999998888888875443


Q ss_pred             ccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHH
Q 046197          111 GKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINV  190 (395)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dv  190 (395)
                      ...++.+..++.+..+|+.|+++||.+++.+++....+.+.+.+.++++.+++.+.+.+  ..++++|+.+.+.++++|+
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~vd~~~~~~~~t~~v  194 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMY--QRSETVDVRELSRVYGYAV  194 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCCceeHHHHHHHHHHHH
Confidence            33333333345666679999999999986666666666666777778889999986431  2335799999999999999


Q ss_pred             HHHHHhcccccCCCC--cccHHHHHHHHHHHHH---HHHhhCCCCcccccc-ccccc--ccHHHHHHHHHHHHHHHHHHH
Q 046197          191 MMRIVAGKRYFGDDV--LEDEEEAGRFKEIVGE---AFALSGTSNPGDHLP-MLNWI--SNYEKRIVKISKRMDEFFQRL  262 (395)
Q Consensus       191 i~~~~fg~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p-~~~~~--~~~~~~~~~~~~~~~~~~~~~  262 (395)
                      |++++||.++...+.  .+.......+...+..   .+.......+.+.+| +++++  .+..++.......+.+++.++
T Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (534)
T PLN03018        195 TMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPI  274 (534)
T ss_pred             HHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            999999998732110  0001111112211221   111111111222333 33311  233334444556778888888


Q ss_pred             HHHHHhhhhhc-c-CCCCCHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHH
Q 046197          263 VDERRNKKEAC-L-ENTDSMIDHLLSLQHSEPH-YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAE  339 (395)
Q Consensus       263 i~~~~~~~~~~-~-~~~~d~~~~ll~~~~~~~~-~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~E  339 (395)
                      ++++++..... . ....|+++.++...++++. .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       275 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        275 IDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            88876532111 1 1246899999976543332 4899999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          340 LDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       340 i~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      |+++++.+..++.+++++|||++|||+||||+||++|+..+|++.+|++++||.||
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~Ip  410 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIP  410 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEEC
Confidence            99999876778999999999999999999999999998878999999999999998


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-52  Score=408.12  Aligned_cols=343  Identities=21%  Similarity=0.303  Sum_probs=257.8

Q ss_pred             CCCCCCCCccccccccCCC-------------------cchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhC
Q 046197           38 LPPSPPCMPVIGHLHLIKP-------------------PTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKN   98 (395)
Q Consensus        38 ~ppgp~~~p~lG~~~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~   98 (395)
                      .||||+++|++||++++..                   .....+.+++++|||++++++|+.++|+++||++++++|+++
T Consensus        43 ~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~  122 (516)
T PLN02290         43 GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY  122 (516)
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC
Confidence            4899999999999887631                   122356789999999999999999999999999999999887


Q ss_pred             CccccCCCCcccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceee
Q 046197           99 DVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVE  178 (395)
Q Consensus        99 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  178 (395)
                      . .+.+++........... ++.++..+|+.|+++||.+. +.|+..+++.+.+.+.++++.+++.|.+. ...++.++|
T Consensus       123 ~-~~~~r~~~~~~~~~~~~-g~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~~vd  198 (516)
T PLN02290        123 N-TVTGKSWLQQQGTKHFI-GRGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA-VESGQTEVE  198 (516)
T ss_pred             C-CCCCCcchhhhHHHHHh-cCCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCceEE
Confidence            3 34555432111100011 22345568999999999986 77999999999999999999999999653 122235799


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccc-cHHHHHHHHHHHHHH
Q 046197          179 LKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWIS-NYEKRIVKISKRMDE  257 (395)
Q Consensus       179 ~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~  257 (395)
                      +.+.+..+++|++++++||.++...     +.....+ +.+........   ....+|++.++. ...+++....+.+..
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~-~~~~~~~~~~~---~~~~~p~~~~~p~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLL-TVLQRLCAQAT---RHLCFPGSRFFPSKYNREIKSLKGEVER  269 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHH-HHHHHHHHHhh---hhhcCchhhhCCChhHHHHHHHHHHHHH
Confidence            9999999999999999999876321     1111111 11111111110   111233333332 233445556778889


Q ss_pred             HHHHHHHHHHhhhhhc--cCCCCCHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHH
Q 046197          258 FFQRLVDERRNKKEAC--LENTDSMIDHLLSLQHS---EPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDV  332 (395)
Q Consensus       258 ~~~~~i~~~~~~~~~~--~~~~~d~~~~ll~~~~~---~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~v  332 (395)
                      ++.+.|+++++....+  .....|+++.++.....   ++..++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~v  349 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTW  349 (516)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHH
Confidence            9999998877543211  12357899999875432   223478999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          333 LQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       333 q~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      |+|+++||++++|.. .++++++++|||++|||+||||++||+|. ++|.+.+|++++||.||
T Consensus       350 q~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP  410 (516)
T PLN02290        350 QDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIP  410 (516)
T ss_pred             HHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEEC
Confidence            999999999999864 78999999999999999999999999996 58999999999999998


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.3e-51  Score=395.72  Aligned_cols=333  Identities=19%  Similarity=0.244  Sum_probs=249.0

Q ss_pred             CCCCCCCCCCCCCccccccccC-C----CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Q 046197           33 RGYKNLPPSPPCMPVIGHLHLI-K----PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPK  107 (395)
Q Consensus        33 ~~~~~~ppgp~~~p~lG~~~~~-~----~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~  107 (395)
                      .+..+.||||+++|++||++.+ .    +.++.++.+++++||+++++++|+.++|+++||+++++||++++..|.++..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            3445689999999999997643 2    3456788999999999999999999999999999999999988776754422


Q ss_pred             cccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhh-hhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHH
Q 046197          108 SLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNV-FSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSEL  186 (395)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  186 (395)
                      ......+  + ...++..+|+.|+++||.++ +.|+..+++. +.+.+.+.+..+++.|.+      ++.+|+.+.++.+
T Consensus       114 ~~~~~~~--g-~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~vd~~~~~~~~  183 (490)
T PLN02500        114 RSIGGIL--G-KWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE------NSTFSAQDEAKKF  183 (490)
T ss_pred             hHHHHHh--C-cccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC------CCCEEehHHHHHH
Confidence            1111111  1 12344458999999999996 7788877775 466777777777776621      2468999999999


Q ss_pred             HHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 046197          187 TINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDER  266 (395)
Q Consensus       187 ~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (395)
                      ++|+|++++||.+....       ....+.+.+.........  ....+|...     .++..+..+.+.+++.++++++
T Consensus       184 ~~~vi~~~~fg~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~p~~~-----~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEE-------ETEQLKKEYVTFMKGVVS--APLNFPGTA-----YRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHHhCCCCCch-------HHHHHHHHHHHHHhhhhc--chhcCCCcc-----cHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999864211       111222222222211100  001122211     1344456678888899999887


Q ss_pred             Hhhhhhcc--CCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          267 RNKKEACL--ENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       267 ~~~~~~~~--~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      ++....+.  ....|+++.+++..     .++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++
T Consensus       250 ~~~~~~~~~~~~~~d~l~~ll~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~  324 (490)
T PLN02500        250 IEKLKEEDESVEEDDLLGWVLKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIA  324 (490)
T ss_pred             HHhhhcccCCCCcchHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Confidence            65322111  13468999988742     489999999999999999999999999999999999999999999999886


Q ss_pred             c-----CCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          345 G-----QQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       345 ~-----~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +     ....++++|+++|||++|||+||||+||++|+. +|.+.+|++++||.||
T Consensus       325 ~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IP  379 (490)
T PLN02500        325 RAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIP  379 (490)
T ss_pred             hccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEEC
Confidence            3     224578999999999999999999999999985 7999999999999998


No 17 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.9e-51  Score=395.48  Aligned_cols=349  Identities=30%  Similarity=0.516  Sum_probs=274.3

Q ss_pred             CCCCCCCccccccccCC--CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccc-cc
Q 046197           39 PPSPPCMPVIGHLHLIK--PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKH-IS  115 (395)
Q Consensus        39 ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~-~~  115 (395)
                      ||||+++|++||++.+.  +.++.++.+++++|||||++++|+.+.++|+||+.+++|+.++...++.++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999885  6788999999999999999999999999999999999999998766665533221111 11


Q ss_pred             cCCeeEEecCCchHHHHHHhhHHHhcCChh-HHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHH
Q 046197          116 YNYTTLVQAPYGDRWRNLRRITAIEVLSSN-RVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRI  194 (395)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~  194 (395)
                      ...+..++..+|+.|+.+|+.+++. |+.. .+ .+.+.+.+.++.+++.|.+.  ......+|+.+.+..+++|+++.+
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~~~-~~~~~~~-~~~~~i~~~~~~l~~~l~~~--~~~~~~vd~~~~~~~~~~d~i~~~  156 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLAPA-FSSKKIL-KLEPLIDEEAEELIDQLRKK--AGSSGPVDLFDWLRRFALDVIGRV  156 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHHHH-HSHHHHH-HHHHHHHHHHHHHHHHHHHT--TTSESEEEHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccc-ccccccc-cccccccccccccccccccc--ccccceeeeecccccccccccccc
Confidence            1122334556789999999999754 4444 55 88999999999999999764  222237999999999999999999


Q ss_pred             HhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCC--Cccccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046197          195 VAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTS--NPGDHLPMLNWI-SNYEKRIVKISKRMDEFFQRLVDERRNKKE  271 (395)
Q Consensus       195 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (395)
                      +||.++...+    +.....+.+.+..++......  .+...+|++.++ ....+...++.+.+.+++.++++++++...
T Consensus       157 ~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (463)
T PF00067_consen  157 LFGKDFGSLD----DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELD  232 (463)
T ss_dssp             HHSSHHHGTT----HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             cccceeeecc----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999875332    122334445555444322111  122345544444 234455666678888999999998887653


Q ss_pred             hccCCCCCHHHHHHhcc-cCCC-CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCc
Q 046197          272 ACLENTDSMIDHLLSLQ-HSEP-HYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHL  349 (395)
Q Consensus       272 ~~~~~~~d~~~~ll~~~-~~~~-~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~  349 (395)
                      .+.....|+++.++... ..++ ..++++++..++..+++||+|||+++++|++++|++||++|+|+++||+++.+++..
T Consensus       233 ~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  312 (463)
T PF00067_consen  233 DGDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGRE  312 (463)
T ss_dssp             SSSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            33235789999999886 3333 379999999999999999999999999999999999999999999999999977677


Q ss_pred             cCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          350 FDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       350 ~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++.+++++|||++|||+||||++|++|..++|.+.+|++++||.||
T Consensus       313 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip  358 (463)
T PF00067_consen  313 ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIP  358 (463)
T ss_dssp             HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999997778999999999999997


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.8e-49  Score=380.77  Aligned_cols=328  Identities=19%  Similarity=0.228  Sum_probs=249.8

Q ss_pred             CCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccccccc
Q 046197           37 NLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHISY  116 (395)
Q Consensus        37 ~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~  116 (395)
                      +.||||+++|++||++.+.++++.++.+++++||++|++++|+.++++++||+++++|+.+++..|..+........+  
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l--  108 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL--  108 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh--
Confidence            578999999999998887656778999999999999999999999999999999999998876655332211111111  


Q ss_pred             CCeeEEecCCchHHHHHHhhHHHhcCChhHHhh-hhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHH
Q 046197          117 NYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNV-FSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIV  195 (395)
Q Consensus       117 ~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~  195 (395)
                      + .+.+++.+|+.|+.+|+.++ +.|+...++. +.+.+.+.++.++++|..      ++++|+.+.+..++++++++++
T Consensus       109 g-~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        109 G-TCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG------LKTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             C-ccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC------CCCEEeeHHHHHHHHHHHHHHH
Confidence            1 22344568999999999996 6788888875 678888888888777631      2468999999999999999999


Q ss_pred             hcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 046197          196 AGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLE  275 (395)
Q Consensus       196 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (395)
                      ||.....        ....+.+.+.....  ........+|.     ...++..++.+.+.+++.+.++++++.    ..
T Consensus       181 ~g~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~lp~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~  241 (463)
T PLN02774        181 AGTLSKP--------ISEEFKTEFFKLVL--GTLSLPIDLPG-----TNYRSGVQARKNIVRMLRQLIQERRAS----GE  241 (463)
T ss_pred             cCCCChH--------HHHHHHHHHHHHhc--ccccCCcCCCC-----hhhhHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence            9975311        11122222221111  11011111121     112345566788888899988887643    12


Q ss_pred             CCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcC---CCccCC
Q 046197          276 NTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQ---QHLFDE  352 (395)
Q Consensus       276 ~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~---~~~~~~  352 (395)
                      ..+|+++.++.... ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++.+.   ...+++
T Consensus       242 ~~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~  320 (463)
T PLN02774        242 THTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDW  320 (463)
T ss_pred             CcccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCH
Confidence            35799999987432 23358999999999999999999999999999999999999999999999998763   245789


Q ss_pred             CCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          353 PDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       353 ~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +++++|||++|||+|+||++|++|.. +|.+.+|++++||.||
T Consensus       321 ~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~Ip  362 (463)
T PLN02774        321 NDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIP  362 (463)
T ss_pred             HHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEEC
Confidence            99999999999999999999999965 6999999999999998


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-49  Score=361.89  Aligned_cols=351  Identities=21%  Similarity=0.287  Sum_probs=281.2

Q ss_pred             CCCCCCCCCCCCccccccccCC----CcchHHHHHHHHhcCCeEEEE-eCCeeEEEeCCHHHHHHHHHhCCccccCCC-C
Q 046197           34 GYKNLPPSPPCMPVIGHLHLIK----PPTHRFLYNLSKQYGPIVSLR-FGSRFVVVVSSFEAAQECFTKNDVVFANRP-K  107 (395)
Q Consensus        34 ~~~~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~yG~i~~~~-~g~~~~v~i~~p~~~~~il~~~~~~~~~r~-~  107 (395)
                      ++-...|||+++|++|.++.++    .+.|+.....+++|||||+.. +|+...|.+.+|+.++.+|..++. ++-|| .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            3344678999999999988652    467888999999999999999 999999999999999999988764 46664 2


Q ss_pred             ccc--ccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhc-ccCCceeeHHHHHH
Q 046197          108 SLS--GKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYS-RQEFSKVELKTLFS  184 (395)
Q Consensus       108 ~~~--~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~  184 (395)
                      ...  ...-.++...++++.+|+.|++.|..+++.+.+++.++.+.|.+.+++++++..+.+... .......|+.+.+.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence            111  111123344456778999999999999999999999999999999999999999976522 13446789999999


Q ss_pred             HHHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc-ccHHHHHHHHHHHHHHHHHHHH
Q 046197          185 ELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI-SNYEKRIVKISKRMDEFFQRLV  263 (395)
Q Consensus       185 ~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~i  263 (395)
                      +++++.||.++||.++...... .+++...|.+++..+|..+.....  ..++++++ .+..+++.++++.+.+++.+.|
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~-~~~~a~~fi~ai~~~F~~s~~l~~--~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGES-PPSEAQQFIDAIKKMFESSAQLML--MPSLWRYFPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCC-CCHHHHHHHHHHHHHHHhHHHHHh--cchHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998643322 345667888888888876443322  12444665 4445788888999999999999


Q ss_pred             HHHHhhhhhccC---CCC-CHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHH
Q 046197          264 DERRNKKEACLE---NTD-SMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAE  339 (395)
Q Consensus       264 ~~~~~~~~~~~~---~~~-d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~E  339 (395)
                      +.+.++.+....   ... .++..|..+      .++.+++..+++++++||.||||+|++|++|+|++||++|+||++|
T Consensus       283 d~~l~~l~~~~~~~~~~~~~l~~~L~~~------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  283 DNALEELEKQDSAGSEYTGSLLELLLRK------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHHHc------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            988775432221   122 333444332      3788999999999999999999999999999999999999999999


Q ss_pred             HhhhhcC-CCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          340 LDTHVGQ-QHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       340 i~~~~~~-~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      |.++..+ ...++.+++.++|||+||||||+||||++|+.. |+..+|.+++||.||
T Consensus       357 i~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vP  412 (519)
T KOG0159|consen  357 ILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVP  412 (519)
T ss_pred             HHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceec
Confidence            9999877 467888999999999999999999999999885 999999999999998


No 20 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.6e-49  Score=378.88  Aligned_cols=342  Identities=26%  Similarity=0.454  Sum_probs=250.8

Q ss_pred             CCCCCCCCCCCccccccccCC-C--cchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-c
Q 046197           35 YKNLPPSPPCMPVIGHLHLIK-P--PTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSL-S  110 (395)
Q Consensus        35 ~~~~ppgp~~~p~lG~~~~~~-~--~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~-~  110 (395)
                      ....||||+++|++|+.+++. .  ....++.++..+||++|+.|+|+.+.|+++||+.+++|+.++...+...+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            456799999999999998884 2  46678888999999999999999999999999999999965443332222111 1


Q ss_pred             ccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHH
Q 046197          111 GKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINV  190 (395)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dv  190 (395)
                      ...  ..+.+++ +++|+.|+++||++. +.|+...++.+.+...+.+..+...+...   ..++.+|+.+.++++|+|+
T Consensus       113 ~~~--~lG~gll-~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~tld~  185 (497)
T KOG0157|consen  113 LKP--WLGDGLL-FSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELA---ASGEEVDLQDLLKRLTLDI  185 (497)
T ss_pred             HHH--HhcCccc-cCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hcCCeEcHHHHHHHHHHHH
Confidence            111  1122444 445999999999986 78998899998888888887777777432   1223399999999999999


Q ss_pred             HHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccc-ccccc--ccHHHHHHHHHHHHHHHHHHHHHHHH
Q 046197          191 MMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLP-MLNWI--SNYEKRIVKISKRMDEFFQRLVDERR  267 (395)
Q Consensus       191 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~  267 (395)
                      |+.++||....+.+.    .....+.+++..+.......   ...| ...++  .+..++..++.+.++.+++++|++|+
T Consensus       186 i~~~~~G~~~~~~~~----~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr  258 (497)
T KOG0157|consen  186 ICKTAMGPESLDAEG----PELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERR  258 (497)
T ss_pred             HHHHhcCCccccccC----CcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999922211111    11223344444322221111   1122 22222  22557788889999999999999988


Q ss_pred             hhhhhcc----CCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhh
Q 046197          268 NKKEACL----ENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTH  343 (395)
Q Consensus       268 ~~~~~~~----~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~  343 (395)
                      +......    ....|+++.+....+   ..+++++|++++.+|++|||||||++++|++++|++||+||+|+++|++++
T Consensus       259 ~~~~~~~~~~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i  335 (497)
T KOG0157|consen  259 EELEKEGSGEEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEI  335 (497)
T ss_pred             HHHHhcCCcccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            6533221    235677775333222   469999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCccCCCCC--CCChhHHHHHHhhhcCCCCCCcCCCcccCcccee-cceeCC
Q 046197          344 VGQQHLFDEPDL--SKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVV-GGFDVP  395 (395)
Q Consensus       344 ~~~~~~~~~~~l--~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i-~g~~IP  395 (395)
                      +|..... +++.  ++|+|+++||+||||||||+|+. .|.+.+|+++ +||.||
T Consensus       336 ~~~~~~~-~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IP  388 (497)
T KOG0157|consen  336 LGNRDDK-WEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIP  388 (497)
T ss_pred             hCCCCCC-CChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeC
Confidence            9743322 3333  35999999999999999999987 5999999999 589998


No 21 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.5e-48  Score=374.18  Aligned_cols=329  Identities=18%  Similarity=0.245  Sum_probs=252.8

Q ss_pred             CCCCCCCCCCCCCCccccccccC-CCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccc
Q 046197           32 RRGYKNLPPSPPCMPVIGHLHLI-KPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLS  110 (395)
Q Consensus        32 ~~~~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  110 (395)
                      +.+..+.||||+++|++||++++ .++++.++.+++++||+++++++|+.++|+++||+++++|+.++...|.  +....
T Consensus        30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~  107 (463)
T PLN02196         30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPA  107 (463)
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCch
Confidence            33445789999999999998875 6788999999999999999999999999999999999999988766552  22211


Q ss_pred             ccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHH
Q 046197          111 GKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINV  190 (395)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dv  190 (395)
                      ......+ ...++..+|+.|+++||+++ +.|+.++++.+.+.+.+.+..+++.|.       ++.+|+.+.++.+++|+
T Consensus       108 ~~~~~~g-~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~v  178 (463)
T PLN02196        108 SKERMLG-KQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-------GTQINTYQEMKTYTFNV  178 (463)
T ss_pred             HHHHHcC-cccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-------CCeEEeHHHHHHHHHHH
Confidence            1111111 23445578999999999997 678888999999999999888887762       24689999999999999


Q ss_pred             HHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046197          191 MMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKK  270 (395)
Q Consensus       191 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (395)
                      ++.++||.+....        ...+.+..... ..  .   ...+|+... ....++..++.+.+.+++.+.++++++. 
T Consensus       179 ~~~~~fG~~~~~~--------~~~~~~~~~~~-~~--~---~~~~~~~~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~-  242 (463)
T PLN02196        179 ALLSIFGKDEVLY--------REDLKRCYYIL-EK--G---YNSMPINLP-GTLFHKSMKARKELAQILAKILSKRRQN-  242 (463)
T ss_pred             HHHHHcCCCCchH--------HHHHHHHHHHH-hc--c---hhcccccCC-CccchHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            9999999864210        11122211111 10  0   011221100 1112345567778888888888876543 


Q ss_pred             hhccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcC---C
Q 046197          271 EACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQ---Q  347 (395)
Q Consensus       271 ~~~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~---~  347 (395)
                         ..+..|+++.++...    ..++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++.+.   .
T Consensus       243 ---~~~~~d~l~~ll~~~----~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  315 (463)
T PLN02196        243 ---GSSHNDLLGSFMGDK----EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEG  315 (463)
T ss_pred             ---CCCcccHHHHHHhcC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccC
Confidence               123578999888532    358999999999999999999999999999999999999999999999988763   3


Q ss_pred             CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          348 HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       348 ~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ..++++++++|||++|||+||||++|++|+.. |.+.+|++++||.||
T Consensus       316 ~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~Ip  362 (463)
T PLN02196        316 ESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIP  362 (463)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeC
Confidence            45788999999999999999999999999875 989999999999998


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=8.7e-49  Score=381.23  Aligned_cols=346  Identities=20%  Similarity=0.280  Sum_probs=245.7

Q ss_pred             CCCCCCCccccccccCCCcchHHHHHHHHhc---CCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccccc
Q 046197           39 PPSPPCMPVIGHLHLIKPPTHRFLYNLSKQY---GPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHIS  115 (395)
Q Consensus        39 ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~y---G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~  115 (395)
                      +|||+++|++||++.+..+ +..+.++.++|   |++|++++|+.+.++++||+++++||.++...|..++...  ....
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~--~~~~  108 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH--SYME  108 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH--HHHH
Confidence            6899999999998765322 34566777777   8999999999999999999999999987644454332111  0010


Q ss_pred             cCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhH-HHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHH
Q 046197          116 YNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIR-RDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRI  194 (395)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~  194 (395)
                      ...++.+++.+|+.|+++||.++ +.|+..+++.+.+.+ .+.++.+++.+.+.  ...++++|+.+.+..+++|+|+++
T Consensus       109 ~~~g~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~--~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        109 VLLGDGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQA--SFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHhcCeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCeEcHHHHHHHHHHHHHHHH
Confidence            01123356678999999999996 678888899888876 56677777777532  123467999999999999999999


Q ss_pred             HhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccc-cc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 046197          195 VAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLN-WI-SNYEKRIVKISKRMDEFFQRLVDERRNKKEA  272 (395)
Q Consensus       195 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (395)
                      +||.++...+....   ...+.+.++......... ....++.+. ++ ....+++.+..+.+++++.+.+++++++...
T Consensus       186 ~fG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        186 GFGVEIGTLSPSLP---ENPFAQAFDTANIIVTLR-FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HhCCCccccccCCC---ccHHHHHHHHHHHHHHHH-HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99998753221000   012333332221111000 000111111 11 1222344556777888898999887654211


Q ss_pred             c----cCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcC--
Q 046197          273 C----LENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQ--  346 (395)
Q Consensus       273 ~----~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~--  346 (395)
                      .    .....|+++.++...++++..++++++.+++.++++||+|||+++++|++|+|++||++|+|+++||++++++  
T Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        262 ARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             cccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence            1    1235689999997654334468999999999999999999999999999999999999999999999987642  


Q ss_pred             ------------------CCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccce-ecceeCC
Q 046197          347 ------------------QHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCV-VGGFDVP  395 (395)
Q Consensus       347 ------------------~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~-i~g~~IP  395 (395)
                                        .+.++++++++|||++|||+||||+|||+|... |.+.+|++ ++||.||
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~Ip  408 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVK  408 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEEC
Confidence                              235788999999999999999999999999885 55556655 5999998


No 23 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.2e-48  Score=373.97  Aligned_cols=337  Identities=26%  Similarity=0.355  Sum_probs=252.9

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CCcchHHHHHHHHhcCC--eEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCC
Q 046197           33 RGYKNLPPSPPCMPVIGHLHLI-----KPPTHRFLYNLSKQYGP--IVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANR  105 (395)
Q Consensus        33 ~~~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r  105 (395)
                      .+..++||||+++|++|+++++     .++++.++.+++++||+  ++++++|+.++|+++||+++++|+.+++ .|.++
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccC
Confidence            3445689999999999998875     24688899999999997  7899999999999999999999998764 44433


Q ss_pred             CCcccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHH
Q 046197          106 PKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSE  185 (395)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  185 (395)
                      ........  .+ .+.++..+|+.|+++||.+++.+.+.+.++.+.+.++++++.+++.+..      .+.+|+.+.+..
T Consensus       117 ~~~~~~~~--~g-~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~------~~~v~~~~~~~~  187 (490)
T PLN02302        117 WPESTVEL--IG-RKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK------MGEIEFLTELRK  187 (490)
T ss_pred             CchhHHHH--hc-cccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC------CCCEehHHHHHH
Confidence            21111111  11 1233446799999999999755446778889999999999999988732      235899999999


Q ss_pred             HHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046197          186 LTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDE  265 (395)
Q Consensus       186 ~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (395)
                      +++|++++++||.++...        ...+...+.........  ....+|...     .++..++.+.+.+++.+.+++
T Consensus       188 ~~~~vi~~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~p~~~-----~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        188 LTFKIIMYIFLSSESELV--------MEALEREYTTLNYGVRA--MAINLPGFA-----YHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHHcCCCChHH--------HHHHHHHHHHHHHHhhh--CCcCCCchh-----hHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864211        11122211111110000  001122111     123345567788888888888


Q ss_pred             HHhhhhhc-cCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          266 RRNKKEAC-LENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       266 ~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      +++..+.+ .....|+++.+++..++++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       253 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~  332 (490)
T PLN02302        253 RRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIA  332 (490)
T ss_pred             HHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            76543211 12457899999987554455689999999999999999999999999999999999999999999999987


Q ss_pred             cCC----CccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          345 GQQ----HLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       345 ~~~----~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +..    ..++++++++|||++|||+|+||++|++|.. +|.+.+|++++||.||
T Consensus       333 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip  386 (490)
T PLN02302        333 KKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIP  386 (490)
T ss_pred             hcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEEC
Confidence            642    1268889999999999999999999999976 6989999999999998


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.6e-48  Score=377.59  Aligned_cols=334  Identities=25%  Similarity=0.369  Sum_probs=245.2

Q ss_pred             ccccccC-CCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcccccccccCCeeEEecCC
Q 046197           48 IGHLHLI-KPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGKHISYNYTTLVQAPY  126 (395)
Q Consensus        48 lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  126 (395)
                      +||+..+ ++..+..+.++|++|||||++++|+.++++|+||+.+++||.++...|..++........   .+..++..+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~---~g~~l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV---MGKGLIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc---cCCceecCC
Confidence            4555555 456788999999999999999999999999999999999999876666654321111111   122345578


Q ss_pred             chHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHHhcccccCCCCc
Q 046197          127 GDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVL  206 (395)
Q Consensus       127 g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~fg~~~~~~~~~  206 (395)
                      |+.|+++|+.++ ++|+...+..+++.+.+.++.++++|.+.  ...++.+|+...+..+++|||+.++||.++..... 
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~--~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~-  294 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAA--ASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN-  294 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc-
Confidence            999999999996 78899999999999999999999999643  23456899999999999999999999998753211 


Q ss_pred             ccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------c--cCCC
Q 046197          207 EDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEA-------C--LENT  277 (395)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~--~~~~  277 (395)
                       ++.....+...+...........+...+|.+..+..+.++..+..+.+..+..++++.+++....       .  ....
T Consensus       295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~  373 (633)
T PLN02738        295 -DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERD  373 (633)
T ss_pred             -chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccccc
Confidence             11222223333322211111111111122222222222344445555666666666544331100       0  1224


Q ss_pred             CCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCccCCCCCCC
Q 046197          278 DSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSK  357 (395)
Q Consensus       278 ~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~l~~  357 (395)
                      .|+++.|++..    ..++++++.+++.++++||+||||++++|++++|++||++|+||++||++++++ ..++++++++
T Consensus       374 ~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~k  448 (633)
T PLN02738        374 PSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKK  448 (633)
T ss_pred             chHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHcc
Confidence            57999888753    248899999999999999999999999999999999999999999999999884 5689999999


Q ss_pred             ChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          358 LKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       358 l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ||||+|||+|+|||||++|.+ +|.+.+|++++||.||
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IP  485 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIK  485 (633)
T ss_pred             CHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEEC
Confidence            999999999999999999986 5888999999999998


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=7.8e-48  Score=368.51  Aligned_cols=332  Identities=18%  Similarity=0.192  Sum_probs=245.0

Q ss_pred             CCCCCCCCCCCccccccccC-----CCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc
Q 046197           35 YKNLPPSPPCMPVIGHLHLI-----KPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSL  109 (395)
Q Consensus        35 ~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~  109 (395)
                      +.++||||.++|++||++++     ..+++.++.+++++||+||++++|+.+.|+++||++++++|.+++..|..+....
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~   84 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKS   84 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchh
Confidence            44579999999999999887     2468899999999999999999999999999999999999998877776553221


Q ss_pred             cccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhh-hhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHH
Q 046197          110 SGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNV-FSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTI  188 (395)
Q Consensus       110 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (395)
                      ....+  + .+.++..+|+.||++|++++ +.|+...+.. ..+.+.+.++.+++.|.      .++.+++.+.+..+++
T Consensus        85 ~~~l~--g-~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         85 LTELM--G-KSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR------DDPPVLVQDETKKIAF  154 (452)
T ss_pred             HHHHh--C-cccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc------CCCCEEhHHHHHHHHH
Confidence            11111  1 12345568999999999987 4565555543 34455555555554431      2357899999999999


Q ss_pred             HHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046197          189 NVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRN  268 (395)
Q Consensus       189 dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  268 (395)
                      +++++++||.+...        ....+.+.+.........  ....+|..    .+ ++..++.+++.+++.++|+++++
T Consensus       155 ~vi~~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~p~~----~~-~~~~~~~~~l~~~~~~~i~~~~~  219 (452)
T PLN03141        155 EVLVKALISLEPGE--------EMEFLKKEFQEFIKGLMS--LPIKLPGT----RL-YRSLQAKKRMVKLVKKIIEEKRR  219 (452)
T ss_pred             HHHHHHHcCCCchH--------HHHHHHHHHHHHhhhHHh--CccCCCch----Hh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999975421        112222222222211100  11111211    11 23445678889999999988775


Q ss_pred             hhhhcc----CCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          269 KKEACL----ENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       269 ~~~~~~----~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      ....+.    ....|+++.++...   +..++++++..++.++++||+|||+++++|++++|++||++|+|+++||+++.
T Consensus       220 ~~~~~~~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        220 AMKNKEEDETGIPKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             HHhccCccccCChhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            432111    12468999988754   23589999999999999999999999999999999999999999999998875


Q ss_pred             c----CCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          345 G----QQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       345 ~----~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      +    .+..++.+++.+|||++|||+|+||+||++|. +||.+.+|++++||.||
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IP  350 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIP  350 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEEC
Confidence            3    23457888999999999999999999999985 58999999999999998


No 26 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.5e-47  Score=368.06  Aligned_cols=339  Identities=18%  Similarity=0.272  Sum_probs=239.7

Q ss_pred             CCCCCCCccccccccCCCc---chHHHHHHHHhcCCeEE---EEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccc
Q 046197           39 PPSPPCMPVIGHLHLIKPP---THRFLYNLSKQYGPIVS---LRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGK  112 (395)
Q Consensus        39 ppgp~~~p~lG~~~~~~~~---~~~~~~~~~~~yG~i~~---~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  112 (395)
                      .|||+++|++||++.+..+   .++++.+..++||..+.   .++|+.++++++||+.+++||.++...|.+++..... 
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~-  111 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI-  111 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH-
Confidence            5789899999998766322   23444444556886554   6789999999999999999999876555544321111 


Q ss_pred             ccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhh--hhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHH
Q 046197          113 HISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNV--FSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINV  190 (395)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dv  190 (395)
                       ... .+..+++++|+.|+++||+++ ++|+...+..  ..+.+.+.++.+++.+.+.  ...++++|+.+.+.++|+|+
T Consensus       112 -~~~-~g~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        112 -FDV-LGEGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNA--AHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             -HHh-hcCcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCeEeHHHHHHHHHHHH
Confidence             111 123455668999999999996 7887776653  2356667778888888542  22346799999999999999


Q ss_pred             HHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccc-----cccc-ccHHHHHHHHHHHHHHHHHHHHH
Q 046197          191 MMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPM-----LNWI-SNYEKRIVKISKRMDEFFQRLVD  264 (395)
Q Consensus       191 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~-~~~~~~~~~~~~~~~~~~~~~i~  264 (395)
                      |++++||.+....+..   .....+.+++.........   ....|+     ..|+ .++.++..++.+.+++++.++|+
T Consensus       187 i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~  260 (500)
T PLN02169        187 SSILMTGYDPMSLSIE---MLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIIS  260 (500)
T ss_pred             HHhheeCCCccccCCC---CCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHH
Confidence            9999999876422110   0112233333322111100   011121     1222 23446677888899999999998


Q ss_pred             HHHhhhhhc---cCCCCCHHHHHHhcccCC---CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHH
Q 046197          265 ERRNKKEAC---LENTDSMIDHLLSLQHSE---PHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATA  338 (395)
Q Consensus       265 ~~~~~~~~~---~~~~~d~~~~ll~~~~~~---~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~  338 (395)
                      ++++.....   .+..+|+++.+++...++   +..++++++.+++.++++||+||||++++|++++|++||++|+|+++
T Consensus       261 ~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~  340 (500)
T PLN02169        261 SRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRH  340 (500)
T ss_pred             HHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            887542111   112468999998764321   12478899999999999999999999999999999999999999999


Q ss_pred             HHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          339 ELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       339 Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ||++++      +++|+++|||++|||+||||+|||+|+..++.+.+|+.++||.||
T Consensus       341 Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~Ip  391 (500)
T PLN02169        341 EINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVD  391 (500)
T ss_pred             HHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEEC
Confidence            998764      578999999999999999999999998874444444556999998


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.3e-46  Score=359.94  Aligned_cols=332  Identities=18%  Similarity=0.248  Sum_probs=243.5

Q ss_pred             CCCCCCCCCCCCCccccccccCC-----CcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Q 046197           33 RGYKNLPPSPPCMPVIGHLHLIK-----PPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPK  107 (395)
Q Consensus        33 ~~~~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~  107 (395)
                      ....++||||.++|++||++++.     .+++.++.+++++||+++++++|+.++++++||+++++++.+++..|..++.
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            34456899999999999998762     4578889999999999999999999999999999999999998777755432


Q ss_pred             cccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHH
Q 046197          108 SLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELT  187 (395)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  187 (395)
                      ......+  + ...++..+|+.|+++||++. ++++...+..+.   .+++.++++...+.+    .+++++.+.+.+++
T Consensus       106 ~~~~~~l--g-~~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t  174 (472)
T PLN02987        106 GSISNLL--G-KHSLLLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW----SSRVLLMEEAKKIT  174 (472)
T ss_pred             HHHHHHh--C-cccccccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh----ccceehHHHHHHHH
Confidence            1111212  1 12344458999999999975 555554444332   223334433322221    13689999999999


Q ss_pred             HHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 046197          188 INVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERR  267 (395)
Q Consensus       188 ~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  267 (395)
                      +|++++++||.+....    .+.....+......+        ....+|++   ....++..++.+++.+++.+++++++
T Consensus       175 ~~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~--------~~~~~p~l---~~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        175 FELTVKQLMSFDPGEW----TESLRKEYVLVIEGF--------FSVPLPLF---STTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHHcCCCChHH----HHHHHHHHHHHHhhh--------hcCCCcCC---CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999754211    011111122111111        11123332   12235566778889999999999887


Q ss_pred             hhhhhccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhc--
Q 046197          268 NKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVG--  345 (395)
Q Consensus       268 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~--  345 (395)
                      +....+.+..+|+++.++....    .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+  
T Consensus       240 ~~~~~~~~~~~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~  315 (472)
T PLN02987        240 KEEEEGAEKKKDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMK  315 (472)
T ss_pred             hhhhccCcccccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHccc
Confidence            6432222235789999997642    4899999999999999999999999999999999999999999999998875  


Q ss_pred             -CCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          346 -QQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       346 -~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                       ....++++++.+|||++|||+||||+||+++. .+|.+.+|++++||.||
T Consensus       316 ~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip  365 (472)
T PLN02987        316 SDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIP  365 (472)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEEC
Confidence             23457888999999999999999999999985 47999999999999998


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-46  Score=363.32  Aligned_cols=340  Identities=24%  Similarity=0.321  Sum_probs=254.5

Q ss_pred             CCCCCCCCccccccccC-----CCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCccccc
Q 046197           38 LPPSPPCMPVIGHLHLI-----KPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSLSGK  112 (395)
Q Consensus        38 ~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  112 (395)
                      +=.|..|||++|+.++.     .+.++..+.+++++|||++++++|+.+.++++||+++++|+.+++..|..++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            45688899999987654     3568899999999999999999999999999999999999988766666543221111


Q ss_pred             ccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhh-hHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHH
Q 046197          113 HISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSP-IRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVM  191 (395)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi  191 (395)
                      .+   .+..++..+|+.|+++||.++ +.|+...++.+.+ .+.++++.+++.|.+.  ...+.++|+.+.++++++|+|
T Consensus        93 ~~---~~~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~--~~~g~~vd~~~~~~~~~~dvi  166 (489)
T PLN02936         93 FL---FGSGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPV--ALSGEAVNMEAKFSQLTLDVI  166 (489)
T ss_pred             HH---hcCccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCceeHHHHHHHHHHHHH
Confidence            11   123345578999999999996 6778777876644 7788899999998653  223468999999999999999


Q ss_pred             HHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccc-----cccccHHHHHHHHHHHHHHHHHHHHHHH
Q 046197          192 MRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPML-----NWISNYEKRIVKISKRMDEFFQRLVDER  266 (395)
Q Consensus       192 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (395)
                      +.++||.++...+.  ..+....+...+......     ....+|++     .++.+..++..++.+.+..++.+.++++
T Consensus       167 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~  239 (489)
T PLN02936        167 GLSVFNYNFDSLTT--DSPVIQAVYTALKEAETR-----STDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKC  239 (489)
T ss_pred             HHHHcCCCcccccc--CcHHHHHHHHHHHHHHHh-----hhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998753221  111111222222111100     11122221     1122223456667778888888888876


Q ss_pred             Hhhhhhc----------cCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHH
Q 046197          267 RNKKEAC----------LENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKA  336 (395)
Q Consensus       267 ~~~~~~~----------~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl  336 (395)
                      +...+..          .+...|+++.|+...+    .++++++.+++.++++||+||||++++|++++|++||++|+|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl  315 (489)
T PLN02936        240 KEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKA  315 (489)
T ss_pred             HHHHhhcccccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            6432110          0124578888886542    3889999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecceeCC
Q 046197          337 TAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       337 ~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      ++||+++++. +.++++++++|||++|||+||||++||+|.+.+|.+.+|++++||.||
T Consensus       316 ~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip  373 (489)
T PLN02936        316 QEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVN  373 (489)
T ss_pred             HHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEEC
Confidence            9999999875 457889999999999999999999999999988887888888999998


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.1e-43  Score=337.75  Aligned_cols=331  Identities=17%  Similarity=0.236  Sum_probs=236.8

Q ss_pred             CccccccccCCCcchHHHHHHHHhcC-CeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-cccccccCCeeEE
Q 046197           45 MPVIGHLHLIKPPTHRFLYNLSKQYG-PIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANRPKSL-SGKHISYNYTTLV  122 (395)
Q Consensus        45 ~p~lG~~~~~~~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~-~~~~~~~~~~~~~  122 (395)
                      .++.|++...-.+.+.++..+.++++ .+++++.++.  ++++||+.+++|+.++...|....... ....+   .+..+
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~---~g~gi  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL---LGRGI  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh---cCCce
Confidence            45778876543345666666777887 5777765554  899999999999988755554332111 11111   12345


Q ss_pred             ecCCchHHHHHHhhHHHhcCChhHHhhh--hhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHHhcccc
Q 046197          123 QAPYGDRWRNLRRITAIEVLSSNRVNVF--SPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRY  200 (395)
Q Consensus       123 ~~~~g~~w~~~Rr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~fg~~~  200 (395)
                      ++.+|+.|+++||.++ +.|+..+++.+  ++.+.+.++.+++.+.+......+.++|+.++++++++|+|+.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            6678999999999996 77888777765  36777777888888854311222467999999999999999999999987


Q ss_pred             cCCCCcccHHHHHHHHHHHHHHHHhhCCCCcccccccc----ccc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 046197          201 FGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPML----NWI-SNYEKRIVKISKRMDEFFQRLVDERRNKKEACLE  275 (395)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (395)
                      ...+...   ....+.++++.+....... ....+|++    .++ .+..+++.+..+.+++++.++|+++++..   ..
T Consensus       203 ~~l~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---~~  275 (502)
T PLN02426        203 GCLELSL---PISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG---FS  275 (502)
T ss_pred             cccCCCC---CccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc---cC
Confidence            4332110   1122333333322111000 00111211    122 12335566777889999999998877532   12


Q ss_pred             CCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCC-CccCCCC
Q 046197          276 NTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQ-HLFDEPD  354 (395)
Q Consensus       276 ~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~-~~~~~~~  354 (395)
                      ...|+++.+++..      .+++++.+++.++++||+||||++++|++|+|++||++|+|+++||+++.+.. ..+++++
T Consensus       276 ~~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~  349 (502)
T PLN02426        276 ASKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEE  349 (502)
T ss_pred             CcchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHH
Confidence            3578999999754      25789999999999999999999999999999999999999999999988753 3679999


Q ss_pred             CCCChhHHHHHHhhhcCCCCCCcCCCcccCcccee-cceeCC
Q 046197          355 LSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVV-GGFDVP  395 (395)
Q Consensus       355 l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i-~g~~IP  395 (395)
                      +++|||++|||+||||+|||+|... |.+.+|+++ +||.||
T Consensus       350 l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip  390 (502)
T PLN02426        350 MKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVA  390 (502)
T ss_pred             HhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEEC
Confidence            9999999999999999999999874 888888776 999998


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.5e-39  Score=288.15  Aligned_cols=333  Identities=17%  Similarity=0.253  Sum_probs=239.3

Q ss_pred             CCCCCCC-CCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhCCccccCC--CCcccccc
Q 046197           37 NLPPSPP-CMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKNDVVFANR--PKSLSGKH  113 (395)
Q Consensus        37 ~~ppgp~-~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r--~~~~~~~~  113 (395)
                      +.||.-. .+||+|+...++++|..++.+..+|||+||++.++++.+.++.+|+....++.......+-.  ........
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            4577554 58999999999999999999999999999999999999999999999999997653222211  11111111


Q ss_pred             cccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHH-HHhhhcccCCceeeHHHHHHHHHHHHHH
Q 046197          114 ISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKK-LSANYSRQEFSKVELKTLFSELTINVMM  192 (395)
Q Consensus       114 ~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~dvi~  192 (395)
                      ++   .+.+....+...-.+.+.+ +......+++.+.+.|.++++.++.. |.     +.+.+..+......+.+.+--
T Consensus       111 Fg---~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~-----~s~~~d~l~~~~~~ii~tAs~  181 (486)
T KOG0684|consen  111 FG---KGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLG-----ESGETDGLYTFCRLIIFTASR  181 (486)
T ss_pred             cC---CCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhcccc-----cccchhHhhhhhHHHhhhhHH
Confidence            21   2233333344444555555 46778889999999999999888876 32     123333344444445554444


Q ss_pred             HHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046197          193 RIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI-SNYEKRIVKISKRMDEFFQRLVDERRNKKE  271 (395)
Q Consensus       193 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (395)
                      .+++|+.....+        ..+...+.++..-.  ......||.  ++ ....++..++.+++.+.+.+.+.++++.. 
T Consensus       182 ~ll~~e~r~~~d--------~~~a~l~~dLd~~F--~~~d~~FP~--~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~-  248 (486)
T KOG0684|consen  182 LLLGGEVRDQLD--------ADVAKLYHDLDQGF--QPFDFLFPY--NLPIPLLRRRDRARKKISKIFSKIILDRRASI-  248 (486)
T ss_pred             Hhhhhhhhhhhc--------chHHHHHHHHhccc--cchHhhccc--CCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            445554432211        12222233322211  111223553  22 12234445778888889988888877642 


Q ss_pred             hccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCc-c
Q 046197          272 ACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHL-F  350 (395)
Q Consensus       272 ~~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~-~  350 (395)
                        ++...|+++.+++ ...++...+|+|+.+..+.+++||+.||+.|.+|++++|++|||+++.+++|+.+++|.... +
T Consensus       249 --s~~~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l  325 (486)
T KOG0684|consen  249 --SKWDNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKL  325 (486)
T ss_pred             --ccccHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCC
Confidence              2345588999888 55667789999999999999999999999999999999999999999999999999987654 8


Q ss_pred             CCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceecc----eeCC
Q 046197          351 DEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVGG----FDVP  395 (395)
Q Consensus       351 ~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~g----~~IP  395 (395)
                      +++++++||.|+.||+|||||+||.+..+ |.+.+|.++.+    |.||
T Consensus       326 ~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip  373 (486)
T KOG0684|consen  326 TYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIP  373 (486)
T ss_pred             CHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecC
Confidence            99999999999999999999999999876 99999999877    8887


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.3e-39  Score=308.14  Aligned_cols=321  Identities=14%  Similarity=0.169  Sum_probs=218.6

Q ss_pred             CCCCCCCCCCccccccccC-----CCcchHHHHHHHHhcCC-eEEEEeCCeeE-------EEeCCHHHHHHHHHh----C
Q 046197           36 KNLPPSPPCMPVIGHLHLI-----KPPTHRFLYNLSKQYGP-IVSLRFGSRFV-------VVVSSFEAAQECFTK----N   98 (395)
Q Consensus        36 ~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~g~~~~-------v~i~~p~~~~~il~~----~   98 (395)
                      .+.|||+.|+|++|+..++     ..++..++.+..+|||+ ||++++++.|+       |+++||++++.+|.+    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            3469999999999998754     34567999999999999 99999987555       999999999999974    3


Q ss_pred             CccccCCCCcccccccccCCeeEEecCCchHHHHHHhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceee
Q 046197           99 DVVFANRPKSLSGKHISYNYTTLVQAPYGDRWRNLRRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVE  178 (395)
Q Consensus        99 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  178 (395)
                      +..+.... ......++......++..+|+.|+++||++. ++|+. .++.+.+.|.+.++.+++.|...  ...+.++|
T Consensus        96 ~~~~~~~~-~~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~--~~~~~~vd  170 (480)
T PLN02648         96 RDVFTGTY-MPSTAFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAE--LAKKGKAE  170 (480)
T ss_pred             cccceeee-ccCccccCCceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHH--HhhCCCcc
Confidence            33233211 1111111111011455678999999999997 67774 66889999999999999999532  12334699


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccCCCCcccHHHHHHHHHHHHHHHHhhCCCCccccccccccc-ccHHHHH---------
Q 046197          179 LKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAGRFKEIVGEAFALSGTSNPGDHLPMLNWI-SNYEKRI---------  248 (395)
Q Consensus       179 ~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~---------  248 (395)
                      +.+.++.+++|++++++||.+....      .....+...+...+...       .+|..... ....++.         
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~~------~l~~~~~~~~~~~~~~~-------~~p~~~~~l~~~~~~~i~~~~~~~~  237 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSET------ALGSDGPALIQKWLALQ-------LAPLASTGLPHVLEELLLHTFPLPF  237 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcchh------hhccchhHHHHHHHHHH-------hhHHHHcCchHHHHHHhhcccCCch
Confidence            9999999999999999999864321      01112222222211100       00100000 0000000         


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHhcccCCCCCCCHHHHHHHHHH-HHHhcccchHHHHHHHHH
Q 046197          249 ---VKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPHYYTDQTIKGLAMT-MLLAGTDTTAVTMEWAMS  324 (395)
Q Consensus       249 ---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~l~~~~~~-ll~AG~dTta~~l~~~~~  324 (395)
                         .+..+.+.+++++                  .++.+++...+  ..++++++.++++. +.++|++||+++++|++|
T Consensus       238 ~~~~~~~~~~~~~~~~------------------~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~  297 (480)
T PLN02648        238 FLVKSDYDKLYDFFRA------------------SATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLK  297 (480)
T ss_pred             hhhhccHHHHHHHHHH------------------HHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence               0000111111111                  12233332222  23899999999875 446677788889999999


Q ss_pred             HHhhCcH-HHHHHHHHHhhhhcC-CCccCCCCCCCChhHHHHHHhhhcCCCCCCcCCCcccCccceec----ceeCC
Q 046197          325 NLVNHPD-VLQKATAELDTHVGQ-QHLFDEPDLSKLKYLHCIISETLRLYPTAPLLVPHRSSDDCVVG----GFDVP  395 (395)
Q Consensus       325 ~L~~~P~-vq~kl~~Ei~~~~~~-~~~~~~~~l~~l~yl~avikEtlRl~p~~p~~~pr~~~~d~~i~----g~~IP  395 (395)
                      +|++||+ +|+|+++||+++.+. ...++++++++|||+++||+|+||+||++|... |.+.+|++++    ||.||
T Consensus       298 ~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~Ip  373 (480)
T PLN02648        298 WVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIK  373 (480)
T ss_pred             HHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEEC
Confidence            9999995 999999999998863 346889999999999999999999999999875 7788999996    79987


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.2e-33  Score=263.97  Aligned_cols=288  Identities=25%  Similarity=0.368  Sum_probs=218.2

Q ss_pred             chHHHHHHHHhcCCeEEEEeCCee--EEEeCCHHHHHHHHHhCCccccCCCCcccccc--cccCCeeEEecCCchHHHHH
Q 046197           58 THRFLYNLSKQYGPIVSLRFGSRF--VVVVSSFEAAQECFTKNDVVFANRPKSLSGKH--ISYNYTTLVQAPYGDRWRNL  133 (395)
Q Consensus        58 ~~~~~~~~~~~yG~i~~~~~g~~~--~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~--~~~~~~~~~~~~~g~~w~~~  133 (395)
                      +........+.||.++.++..++.  .+++++|+.+++++.++. .+++.........  ......+.+...+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344555667789999888765443  789999999999998865 2222221111110  11112222556789999999


Q ss_pred             HhhHHHhcCChhHHhhhhhhHHHHHHHHHHHHHhhhcccCCceeeHHHHHHHHHHHHHHHHHhcccccCCCCcccHHHHH
Q 046197          134 RRITAIEVLSSNRVNVFSPIRRDEIKRLLKKLSANYSRQEFSKVELKTLFSELTINVMMRIVAGKRYFGDDVLEDEEEAG  213 (395)
Q Consensus       134 Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~  213 (395)
                      ||+++ +.|++..++.+.|.+.+.+..+++.+ ..    . +.+++.+....+++++|+ .+||.+..         ...
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~----~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~---------~~~  165 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ----G-GADLVLDFAAELTLRVIA-ELLGVPLE---------DRP  165 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc----C-CchhHHHHhhhhhHHHHH-HHhCCCHH---------HHH
Confidence            99997 78999999999999999999999887 32    1 567889999999999999 99997642         112


Q ss_pred             HHHHHHHHHHHhhCCCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHhcccCCCC
Q 046197          214 RFKEIVGEAFALSGTSNPGDHLPMLNWISNYEKRIVKISKRMDEFFQRLVDERRNKKEACLENTDSMIDHLLSLQHSEPH  293 (395)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~  293 (395)
                      .+..........   ..     |.. +......+..++...+.+++.++|++++.      +..+|+++.++.+.++++.
T Consensus       166 ~~~~~~~~~~~~---~~-----~~~-~~~~~~~~~~~a~~~~~~~~~~li~~rR~------~~~~dlls~l~~a~~~~~~  230 (411)
T COG2124         166 QLLRWSDALLLR---LD-----PDL-GPEEPWRRARAARRELDAYLRALIAERRA------APRDDLLSLLLSAEDDGGG  230 (411)
T ss_pred             HHHHHHHHHHhc---cC-----ccc-CCcccHHHHHHHHHHHHHHHHHHHHHhcc------CCcccHHHHHHHHhhCCCC
Confidence            232322222211   00     111 01111245567788999999999999873      3568899999988776554


Q ss_pred             CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhhcCCCccCCCCCCCChhHHHHHHhhhcCCC
Q 046197          294 YYTDQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHVGQQHLFDEPDLSKLKYLHCIISETLRLYP  373 (395)
Q Consensus       294 ~~~~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avikEtlRl~p  373 (395)
                      .+|++||+++++.+++||||||+++++|++|.|++||++++++++|.+.                ||++++|+|+||+||
T Consensus       231 ~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~p  294 (411)
T COG2124         231 RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYP  294 (411)
T ss_pred             cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCC
Confidence            6999999999999999999999999999999999999999999999764                999999999999999


Q ss_pred             CCCcCCCcccCccceecceeCC
Q 046197          374 TAPLLVPHRSSDDCVVGGFDVP  395 (395)
Q Consensus       374 ~~p~~~pr~~~~d~~i~g~~IP  395 (395)
                      |++. ++|.+.+|++++|+.||
T Consensus       295 pv~~-~~R~~~~d~~igg~~Ip  315 (411)
T COG2124         295 PVPL-ARRVATEDVELGGYRIP  315 (411)
T ss_pred             chhc-cceeccCCEeeCCEEeC
Confidence            9998 78999999999999997


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=79.77  E-value=5.4  Score=24.70  Aligned_cols=43  Identities=16%  Similarity=0.211  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHh
Q 046197          299 TIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELD  341 (395)
Q Consensus       299 ~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~  341 (395)
                      ++...+..++-.|-|..+-.++..+.+..-||+....+..|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            5667778888889999999999999999999999999999874


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=61.39  E-value=7.9  Score=24.95  Aligned_cols=23  Identities=26%  Similarity=0.434  Sum_probs=17.9

Q ss_pred             HHHHHhhCcHHHHHHHHHHhhhh
Q 046197          322 AMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       322 ~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      ++.||.+||++.+|+.+.=.+.+
T Consensus         5 iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEe
Confidence            56799999999999998533333


No 35 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=59.32  E-value=43  Score=23.79  Aligned_cols=48  Identities=6%  Similarity=0.053  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          297 DQTIKGLAMTMLLAGTDTTAVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       297 ~~~l~~~~~~ll~AG~dTta~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      ...........++-=|.+++....-.+.+-++||+..+++++.+.+-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            344555566788999999999999999999999999999999987654


No 36 
>PF07172 GRP:  Glycine rich protein family;  InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=47.49  E-value=18  Score=26.30  Aligned_cols=20  Identities=25%  Similarity=0.243  Sum_probs=10.3

Q ss_pred             CCCcchhHHHHHHHHHHHHH
Q 046197            1 MEKKNTTILYACVSFLFVII   20 (395)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~   20 (395)
                      |-+|.+++|..+++++++++
T Consensus         1 MaSK~~llL~l~LA~lLlis   20 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLIS   20 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHH
Confidence            77777644444444444433


No 37 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=45.98  E-value=54  Score=20.56  Aligned_cols=36  Identities=25%  Similarity=0.441  Sum_probs=24.1

Q ss_pred             HHHHHHhcCCeEEEEeCCe----eEEEeCCHHHHHHHHHh
Q 046197           62 LYNLSKQYGPIVSLRFGSR----FVVVVSSFEAAQECFTK   97 (395)
Q Consensus        62 ~~~~~~~yG~i~~~~~g~~----~~v~i~~p~~~~~il~~   97 (395)
                      +.+...+||+|..+.+..+    -.|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            3567789999998876442    34555688888877753


No 38 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=40.35  E-value=57  Score=24.07  Aligned_cols=60  Identities=27%  Similarity=0.375  Sum_probs=37.8

Q ss_pred             CCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCee------EEEeCCHHHHHHHHHh
Q 046197           36 KNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRF------VVVVSSFEAAQECFTK   97 (395)
Q Consensus        36 ~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~------~v~i~~p~~~~~il~~   97 (395)
                      ..+||--..+-++-|++.-  --.+.+.++.-+||+|.++++|..+      .|+-.|-..++....+
T Consensus        11 ~rlppevnriLyirNLp~~--ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPFK--ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCChhhheeEEEecCCcc--ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3455544455555555422  1246777888899999999998543      3555666666666544


No 39 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=39.28  E-value=93  Score=23.19  Aligned_cols=11  Identities=36%  Similarity=0.455  Sum_probs=7.7

Q ss_pred             CCccccccccC
Q 046197           44 CMPVIGHLHLI   54 (395)
Q Consensus        44 ~~p~lG~~~~~   54 (395)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            56788887654


No 40 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=38.75  E-value=50  Score=19.34  Aligned_cols=12  Identities=25%  Similarity=0.562  Sum_probs=9.8

Q ss_pred             hhCcHHHHHHHH
Q 046197          327 VNHPDVLQKATA  338 (395)
Q Consensus       327 ~~~P~vq~kl~~  338 (395)
                      .+||++++.++.
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            399999988765


No 41 
>PF11057 Cortexin:  Cortexin of kidney;  InterPro: IPR020066 Cortexin is a neuron-specific, 82-residue membrane protein which is found especially in vertebrate brain cortex tissue. It may mediate extracellular or intracellular signalling of cortical neurons during forebrain development. Cortexin is present at significant levels in the foetal brain, suggesting that it may be important to neurons of both the developing and adult cerebral cortex. Cortexin has a conserved single membrane-spanning region in the middle of each sequence []. In humans, there is selective expression of Cortexin 3 (CTXN3) in the kidney as well as the brain []. This entry contains Cortexins 1, 2 and 3.; GO: 0031224 intrinsic to membrane
Probab=38.30  E-value=44  Score=22.73  Aligned_cols=23  Identities=9%  Similarity=0.254  Sum_probs=16.2

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHH
Q 046197            2 EKKNTTILYACVSFLFVIIALKK   24 (395)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~   24 (395)
                      ||+.....+.++++.+++..+|+
T Consensus        26 eqkt~faFV~~L~~fL~~liVRC   48 (81)
T PF11057_consen   26 EQKTAFAFVGLLCLFLGLLIVRC   48 (81)
T ss_pred             ccceeehHHHHHHHHHHHHHHHH
Confidence            67777677777777777666665


No 42 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=35.73  E-value=15  Score=24.48  Aligned_cols=15  Identities=27%  Similarity=0.585  Sum_probs=12.7

Q ss_pred             CChhHHHHHHhhhcC
Q 046197          357 KLKYLHCIISETLRL  371 (395)
Q Consensus       357 ~l~yl~avikEtlRl  371 (395)
                      +.-+++.+|+|++|+
T Consensus        39 r~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   39 RKQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            456899999999996


No 43 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=34.36  E-value=31  Score=24.16  Aligned_cols=60  Identities=15%  Similarity=0.082  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHhhhhcCCCccCCCCCCC---ChhHHHHHHhhhcCCCCCCcCCC--cccCccceecce
Q 046197          331 DVLQKATAELDTHVGQQHLFDEPDLSK---LKYLHCIISETLRLYPTAPLLVP--HRSSDDCVVGGF  392 (395)
Q Consensus       331 ~vq~kl~~Ei~~~~~~~~~~~~~~l~~---l~yl~avikEtlRl~p~~p~~~p--r~~~~d~~i~g~  392 (395)
                      +.|+++.+.+.++ +.+...||.++.+   .|---..+--+|+-+|. |..+|  |+...+-.++||
T Consensus         2 ~f~~~V~~~l~~I-P~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~-~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTI-PYGETKSYGQLAARIGNPKAVRAVGGANGRNPL-AILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCC-CCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCC-CCCCCCceeECCCCCCCCC
Confidence            5688899988875 4456677766543   23223344445666665 45566  677777777776


No 44 
>PF02468 PsbN:  Photosystem II reaction centre N protein (psbN);  InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=33.62  E-value=95  Score=18.75  Aligned_cols=22  Identities=18%  Similarity=0.203  Sum_probs=10.1

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHH
Q 046197            1 MEKKNTTILYACVSFLFVIIALK   23 (395)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~   23 (395)
                      ||... .+...+.++++.+..+.
T Consensus         1 Me~a~-~~~i~i~~~lv~~Tgy~   22 (43)
T PF02468_consen    1 METAT-VLAIFISCLLVSITGYA   22 (43)
T ss_pred             CCcee-eHHHHHHHHHHHHHhhh
Confidence            88333 34444444444444443


No 45 
>PF05814 DUF843:  Baculovirus protein of unknown function (DUF843);  InterPro: IPR008561 This family consists of several unidentified baculovirus proteins of around 85 residues long with no known function.
Probab=29.57  E-value=65  Score=22.55  Aligned_cols=22  Identities=0%  Similarity=0.327  Sum_probs=16.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhh
Q 046197            6 TTILYACVSFLFVIIALKKLFQ   27 (395)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~   27 (395)
                      +.+++.++++.++++++.+.|.
T Consensus        24 s~li~~~LilfviF~~~L~~yy   45 (83)
T PF05814_consen   24 SELIITLLILFVIFFCVLQVYY   45 (83)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            5577888888888888877764


No 46 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=26.96  E-value=1.1e+02  Score=21.82  Aligned_cols=18  Identities=22%  Similarity=0.429  Sum_probs=15.6

Q ss_pred             CcHHHHHHHHHHhhhhcC
Q 046197          329 HPDVLQKATAELDTHVGQ  346 (395)
Q Consensus       329 ~P~vq~kl~~Ei~~~~~~  346 (395)
                      -|+..+.+++||-+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999988764


No 47 
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=24.97  E-value=2.6e+02  Score=22.24  Aligned_cols=57  Identities=18%  Similarity=0.229  Sum_probs=37.6

Q ss_pred             CCCCCCCCCCCCccccccccCCCcchHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHH
Q 046197           34 GYKNLPPSPPCMPVIGHLHLIKPPTHRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECF   95 (395)
Q Consensus        34 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il   95 (395)
                      ...++|.|+...|+++|+..     +..-....+..+.+..++....-+++..+.+.+++++
T Consensus        50 ~~~GlpqG~~lS~~L~~~~l-----~~~d~~i~~~~~~~~~~RY~DD~~i~~~~~~~~~~~~  106 (158)
T cd01646          50 QTNGLPIGPLTSRFLANIYL-----NDVDHELKSKLKGVDYVRYVDDIRIFADSKEEAEEIL  106 (158)
T ss_pred             CCceEccCcchHHHHHHHHH-----HHHHHHHHhccCCceEEEecCcEEEEcCCHHHHHHHH
Confidence            34568889998999998642     2223333343666776777777777777877766554


No 48 
>PRK00901 methylated-DNA--protein-cysteine methyltransferase; Provisional
Probab=23.80  E-value=46  Score=26.71  Aligned_cols=61  Identities=10%  Similarity=0.101  Sum_probs=39.8

Q ss_pred             cHHHHHHHHHHhhhhcCCCccCCCCCCC---ChhHHHHHHhhhcCCCCCCcCCC--cccCccceecce
Q 046197          330 PDVLQKATAELDTHVGQQHLFDEPDLSK---LKYLHCIISETLRLYPTAPLLVP--HRSSDDCVVGGF  392 (395)
Q Consensus       330 P~vq~kl~~Ei~~~~~~~~~~~~~~l~~---l~yl~avikEtlRl~p~~p~~~p--r~~~~d~~i~g~  392 (395)
                      .+.|+++.+++.++ +-+...||.++.+   -|---..+--++.-+|. |+.+|  |+...|-.++||
T Consensus        72 t~fq~~Vw~~l~~I-p~G~t~tY~~lA~~~g~p~a~RAVg~A~~~NP~-~iiIPCHRVv~~~G~lggy  137 (155)
T PRK00901         72 TEFQKKVWKALQEI-PYGETRSYKEIAVNIGNPKACRAVGLANNKNPI-PIFIPCHRVIGANGKLVGY  137 (155)
T ss_pred             ChHHHHHHHHHccC-CCCCcCCHHHHHHHHCCCchHHHHHHHHHhCCC-CCccCCceEECCCCCCCCC
Confidence            47889999988865 3445667766543   23333455566776655 56667  677777778887


No 49 
>PF10454 DUF2458:  Protein of unknown function (DUF2458);  InterPro: IPR018858  This entry represents a family of uncharacterised proteins. 
Probab=23.38  E-value=1e+02  Score=24.58  Aligned_cols=28  Identities=18%  Similarity=0.415  Sum_probs=23.9

Q ss_pred             chHHHHHHHHHHHhhCcHHHHHHHHHHh
Q 046197          314 TTAVTMEWAMSNLVNHPDVLQKATAELD  341 (395)
Q Consensus       314 Tta~~l~~~~~~L~~~P~vq~kl~~Ei~  341 (395)
                      |-..+|...+-.+++||+.++++++=|.
T Consensus         7 ~w~~ALryv~~~v~~n~~~~~~Ir~Li~   34 (150)
T PF10454_consen    7 TWPAALRYVMKTVAQNPEFLQRIRRLIK   34 (150)
T ss_pred             cHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            5677899999999999999999987443


No 50 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.18  E-value=2.3e+02  Score=21.73  Aligned_cols=39  Identities=10%  Similarity=0.281  Sum_probs=29.5

Q ss_pred             chHHHHHHHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHhC
Q 046197           58 THRFLYNLSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTKN   98 (395)
Q Consensus        58 ~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~   98 (395)
                      ....+.+|.++||.+--  ......+...|++.++++....
T Consensus        76 v~~~i~~w~~~~g~v~l--~~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRL--YKGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEE--ecCeEEEEECCHHHHHHHHhCh
Confidence            45688899999998763  3345567788999999998653


No 51 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=23.03  E-value=1.2e+02  Score=20.41  Aligned_cols=24  Identities=8%  Similarity=0.195  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHH
Q 046197          316 AVTMEWAMSNLVNHPDVLQKATAE  339 (395)
Q Consensus       316 a~~l~~~~~~L~~~P~vq~kl~~E  339 (395)
                      +...+-++--++|+||.+.+++.-
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~   43 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSL   43 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHH
Confidence            455667778899999999999875


No 52 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.55  E-value=2.1e+02  Score=20.36  Aligned_cols=33  Identities=15%  Similarity=0.288  Sum_probs=26.7

Q ss_pred             HHHhcCCeEEEEeCCeeEEEeCCHHHHHHHHHh
Q 046197           65 LSKQYGPIVSLRFGSRFVVVVSSFEAAQECFTK   97 (395)
Q Consensus        65 ~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~   97 (395)
                      .-++||+|....=-.+.+++-++-+.+.+++.+
T Consensus        21 qLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          21 QLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             HHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            346999999777677888888888899998865


No 53 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=22.05  E-value=2.8e+02  Score=19.47  Aligned_cols=20  Identities=40%  Similarity=0.517  Sum_probs=13.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q 046197            8 ILYACVSFLFVIIALKKLFQ   27 (395)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~   27 (395)
                      ++.++++++++++.+..+|+
T Consensus        26 ~lMtILivLVIIiLlImlfq   45 (85)
T PF10717_consen   26 TLMTILIVLVIIILLIMLFQ   45 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            46666777777777666775


No 54 
>PF01035 DNA_binding_1:  6-O-methylguanine DNA methyltransferase, DNA binding domain;  InterPro: IPR014048 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase This entry represents the DNA binding region of 6-O-methylguanine-DNA methyltransferases.  The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources [].; GO: 0003824 catalytic activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A 2KIM_A 2KIF_A ....
Probab=21.12  E-value=33  Score=24.25  Aligned_cols=60  Identities=12%  Similarity=0.249  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHhhhhcCCCccCCCCCCC---ChhHHHHHHhhhcCCCCCCcCCC--cccCccceecce
Q 046197          331 DVLQKATAELDTHVGQQHLFDEPDLSK---LKYLHCIISETLRLYPTAPLLVP--HRSSDDCVVGGF  392 (395)
Q Consensus       331 ~vq~kl~~Ei~~~~~~~~~~~~~~l~~---l~yl~avikEtlRl~p~~p~~~p--r~~~~d~~i~g~  392 (395)
                      +-|+++.+.+.++ +.+...|+.++.+   .|---..+--.|+-.| .|..+|  |+...|-.++||
T Consensus         2 ~f~~~V~~~v~~I-P~G~v~TYg~iA~~~g~p~~ar~Vg~al~~np-~~~~iP~HRVv~~~G~l~~~   66 (85)
T PF01035_consen    2 PFQRRVWEAVRQI-PYGKVTTYGEIARLLGRPKAARAVGSALARNP-IPIIIPCHRVVNSDGSLGGY   66 (85)
T ss_dssp             HHHHHHHHHHTTS--TT-BEEHHHHHHHTT-TTCHHHHHHHHHTSS-CTTTSGGGGEEBTTSBECTT
T ss_pred             hHHHHHHHHHHcC-CCCceEeHHHHHHHHhhcccHHHHHHHhcccc-ccCCCCeEEEECCCCCcCCC
Confidence            4578888888875 4445566655432   2334445556677766 455566  777778777776


No 55 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=21.11  E-value=2e+02  Score=24.12  Aligned_cols=62  Identities=16%  Similarity=0.164  Sum_probs=37.1

Q ss_pred             HhcccchHHHHHHHHHHHhhCcHHHH----------HHHHHHhhhhcCCCccCC--CCCCCChhHHHHHHhhhc
Q 046197          309 LAGTDTTAVTMEWAMSNLVNHPDVLQ----------KATAELDTHVGQQHLFDE--PDLSKLKYLHCIISETLR  370 (395)
Q Consensus       309 ~AG~dTta~~l~~~~~~L~~~P~vq~----------kl~~Ei~~~~~~~~~~~~--~~l~~l~yl~avikEtlR  370 (395)
                      .||+-||+.+..-++..+.-++.+-+          ....+|++....+..+++  .+-+.++.|+.++.|-=|
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~   88 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQ   88 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhcc
Confidence            47888888888888877765553322          223333333222333333  456788999999988543


No 56 
>PRK02302 hypothetical protein; Provisional
Probab=20.92  E-value=2.2e+02  Score=20.39  Aligned_cols=31  Identities=26%  Similarity=0.388  Sum_probs=24.7

Q ss_pred             HhcCCeEEEEeCCeeEEEeCCHHHHHHHHHh
Q 046197           67 KQYGPIVSLRFGSRFVVVVSSFEAAQECFTK   97 (395)
Q Consensus        67 ~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~   97 (395)
                      ++||+|..+.=-.+.+++=.|-+.+.++..+
T Consensus        24 rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         24 SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            6999999776666777777888888888755


No 57 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.82  E-value=1.1e+02  Score=18.32  Aligned_cols=19  Identities=16%  Similarity=0.239  Sum_probs=14.2

Q ss_pred             HHHHHHHhhCcHHHHHHHH
Q 046197          320 EWAMSNLVNHPDVLQKATA  338 (395)
Q Consensus       320 ~~~~~~L~~~P~vq~kl~~  338 (395)
                      -|-++-++++||||.-+.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4566778899999987754


No 58 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.52  E-value=1.2e+02  Score=21.93  Aligned_cols=29  Identities=10%  Similarity=0.306  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHhhhh
Q 046197          316 AVTMEWAMSNLVNHPDVLQKATAELDTHV  344 (395)
Q Consensus       316 a~~l~~~~~~L~~~P~vq~kl~~Ei~~~~  344 (395)
                      ..++.|-++-.-.+||..+.+.+||++..
T Consensus        53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   53 LFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            34567777777799999999999998864


No 59 
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.09  E-value=1.5e+02  Score=26.25  Aligned_cols=49  Identities=18%  Similarity=0.173  Sum_probs=32.0

Q ss_pred             CCCCCccccccccCCCcchHHHHHHHHhcC----CeEEEEeCCeeEEEeCCHH
Q 046197           41 SPPCMPVIGHLHLIKPPTHRFLYNLSKQYG----PIVSLRFGSRFVVVVSSFE   89 (395)
Q Consensus        41 gp~~~p~lG~~~~~~~~~~~~~~~~~~~yG----~i~~~~~g~~~~v~i~~p~   89 (395)
                      |+.-+|+.|..+.+.........+..+.|+    +.+.+.+|++.--+...+|
T Consensus       128 ~~Nilpi~Gs~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d  180 (329)
T COG3660         128 GPNILPINGSPHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQED  180 (329)
T ss_pred             CCceeeccCCCCcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHH
Confidence            666788899888886666666777778885    4666666654333334333


Done!