Query 046199
Match_columns 902
No_of_seqs 1099 out of 5959
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 16:57:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.5E-88 5.2E-93 829.8 44.4 621 2-659 6-754 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.3E-71 1.5E-75 675.7 35.4 547 44-620 100-741 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-62 7.1E-67 593.6 44.5 544 44-623 25-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-61 3.9E-66 587.1 43.0 563 48-647 8-627 (680)
5 3j0a_A TOLL-like receptor 5; m 100.0 3E-60 1E-64 585.9 43.5 529 48-624 8-565 (844)
6 4eco_A Uncharacterized protein 100.0 6.3E-61 2.2E-65 572.5 24.1 504 6-620 28-601 (636)
7 3t6q_A CD180 antigen; protein- 100.0 5.2E-59 1.8E-63 556.2 36.3 530 49-624 17-565 (606)
8 4ecn_A Leucine-rich repeat pro 100.0 8.4E-59 2.9E-63 562.2 29.9 530 4-620 265-865 (876)
9 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-57 4.3E-62 544.2 36.5 526 48-624 15-563 (606)
10 3t6q_A CD180 antigen; protein- 100.0 6.6E-57 2.3E-61 538.0 38.6 514 44-599 33-564 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 1.9E-56 6.3E-61 552.1 43.2 527 71-647 7-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 8.5E-56 2.9E-60 528.4 32.9 529 70-648 13-564 (606)
13 2z81_A CD282 antigen, TOLL-lik 100.0 5.2E-53 1.8E-57 498.1 28.7 497 30-625 2-516 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 2.2E-52 7.6E-57 495.3 33.3 528 49-647 12-561 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 1.2E-50 4E-55 480.5 33.6 513 70-648 9-537 (570)
16 4eco_A Uncharacterized protein 100.0 7.1E-52 2.4E-56 494.4 22.1 358 249-646 192-604 (636)
17 2z7x_B TOLL-like receptor 1, v 100.0 9.5E-51 3.2E-55 475.4 26.6 463 72-624 4-486 (520)
18 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-49 6.3E-54 467.9 27.5 479 73-646 10-514 (549)
19 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-48 9E-53 466.5 37.5 527 50-624 37-585 (635)
20 2z7x_B TOLL-like receptor 1, v 100.0 1.7E-48 5.9E-53 456.2 25.1 456 121-647 4-486 (520)
21 4ecn_A Leucine-rich repeat pro 100.0 5.2E-48 1.8E-52 467.8 25.7 452 149-624 323-845 (876)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.2E-47 7.5E-52 450.7 26.6 439 149-624 52-515 (562)
23 4g8a_A TOLL-like receptor 4; l 100.0 6.8E-46 2.3E-50 445.5 35.4 509 45-597 53-582 (635)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.4E-46 1.8E-50 438.8 25.6 462 47-599 34-514 (562)
25 1jl5_A Outer protein YOPM; leu 100.0 1.1E-44 3.9E-49 413.3 24.7 239 316-624 174-416 (454)
26 1ogq_A PGIP-2, polygalacturona 100.0 2.5E-44 8.7E-49 390.9 18.9 289 4-350 2-302 (313)
27 1jl5_A Outer protein YOPM; leu 100.0 9.1E-44 3.1E-48 405.9 23.9 398 148-643 10-410 (454)
28 3v47_A TOLL-like receptor 5B a 100.0 4.5E-43 1.5E-47 403.1 27.2 372 240-628 30-417 (455)
29 3v47_A TOLL-like receptor 5B a 100.0 1.4E-42 4.6E-47 399.2 24.8 330 235-599 74-412 (455)
30 3bz5_A Internalin-J, INLJ; leu 100.0 3.3E-41 1.1E-45 385.0 26.2 365 56-578 30-394 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 8.1E-40 2.8E-44 373.5 26.3 368 156-624 25-392 (457)
32 1o6v_A Internalin A; bacterial 100.0 1.1E-38 3.7E-43 367.2 29.5 343 45-455 47-389 (466)
33 1o6v_A Internalin A; bacterial 100.0 4.7E-38 1.6E-42 361.9 30.4 106 507-620 284-389 (466)
34 2id5_A Lingo-1, leucine rich r 100.0 9.3E-39 3.2E-43 369.3 23.6 348 243-647 14-361 (477)
35 2id5_A Lingo-1, leucine rich r 100.0 3.4E-37 1.2E-41 356.3 26.2 336 232-624 26-361 (477)
36 4fih_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41 333.1 16.6 170 726-900 74-244 (346)
37 3o6n_A APL1; leucine-rich repe 100.0 2.3E-36 7.8E-41 339.7 22.1 337 262-647 43-379 (390)
38 4b9d_A Serine/threonine-protei 100.0 2.7E-37 9.2E-42 334.1 13.8 173 725-900 23-199 (350)
39 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.6E-37 1.9E-41 326.0 14.9 172 725-900 31-208 (311)
40 4fie_A Serine/threonine-protei 100.0 1.8E-36 6.3E-41 335.2 17.8 171 725-900 150-321 (423)
41 3oja_B Anopheles plasmodium-re 100.0 4.3E-36 1.5E-40 356.1 22.2 337 263-648 50-386 (597)
42 4fcg_A Uncharacterized protein 100.0 4.7E-36 1.6E-40 327.7 16.5 260 5-324 24-310 (328)
43 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-35 4E-40 322.7 18.7 253 394-648 51-310 (313)
44 3o6n_A APL1; leucine-rich repe 100.0 6E-35 2.1E-39 328.1 24.3 336 238-623 43-378 (390)
45 4asz_A BDNF/NT-3 growth factor 100.0 2.9E-36 9.9E-41 321.8 12.7 175 723-900 10-204 (299)
46 3oja_B Anopheles plasmodium-re 100.0 4.6E-35 1.6E-39 347.2 23.9 345 23-500 10-359 (597)
47 3hyh_A Carbon catabolite-derep 100.0 1.2E-35 4E-40 311.7 15.4 169 726-900 13-185 (275)
48 3ubd_A Ribosomal protein S6 ki 100.0 2.6E-36 8.9E-41 321.1 9.6 172 725-900 23-200 (304)
49 4aoj_A High affinity nerve gro 100.0 1.3E-35 4.4E-40 321.3 14.9 174 724-900 39-234 (329)
50 3omv_A RAF proto-oncogene seri 100.0 1.1E-35 3.6E-40 317.3 13.8 173 721-899 31-207 (307)
51 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-35 5.4E-40 318.9 13.6 168 724-900 56-230 (336)
52 3fpq_A Serine/threonine-protei 100.0 7.7E-35 2.6E-39 308.4 16.6 166 728-899 28-203 (290)
53 4gt4_A Tyrosine-protein kinase 100.0 4.8E-35 1.7E-39 313.7 13.0 174 724-900 24-221 (308)
54 4fmz_A Internalin; leucine ric 100.0 2.4E-33 8.3E-38 309.9 27.0 307 260-619 40-346 (347)
55 4g31_A Eukaryotic translation 100.0 9.5E-35 3.2E-39 310.7 15.1 172 726-900 5-204 (299)
56 4fmz_A Internalin; leucine ric 100.0 2.3E-33 8E-38 310.0 26.3 308 235-595 39-346 (347)
57 2ft3_A Biglycan; proteoglycan, 100.0 8.8E-33 3E-37 303.2 25.6 292 265-616 34-330 (332)
58 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-32 4.1E-37 302.1 24.2 251 142-452 71-331 (332)
59 3hmm_A TGF-beta receptor type- 100.0 1.4E-33 4.8E-38 303.3 15.8 168 725-899 2-185 (303)
60 4ase_A Vascular endothelial gr 100.0 8.9E-34 3E-38 309.3 14.0 183 715-900 53-261 (353)
61 1xku_A Decorin; proteoglycan, 100.0 4.7E-32 1.6E-36 297.2 25.7 290 263-617 30-330 (330)
62 1xku_A Decorin; proteoglycan, 100.0 5.1E-32 1.7E-36 296.9 24.4 268 150-452 53-330 (330)
63 1z7x_W Ribonuclease inhibitor; 100.0 6.8E-36 2.3E-40 343.9 -11.1 367 44-455 3-412 (461)
64 4b99_A Mitogen-activated prote 100.0 1.5E-32 5.2E-37 305.0 15.3 171 725-900 53-236 (398)
65 3v5w_A G-protein coupled recep 100.0 2.6E-32 9E-37 315.1 17.3 171 723-899 186-363 (689)
66 1z7x_W Ribonuclease inhibitor; 100.0 1.7E-35 5.7E-40 340.7 -9.8 378 197-620 3-441 (461)
67 4f9c_A Cell division cycle 7-r 100.0 3E-32 1E-36 299.5 16.3 169 723-900 18-220 (361)
68 3uto_A Twitchin; kinase, muscl 100.0 8.2E-32 2.8E-36 314.2 17.3 172 725-900 156-330 (573)
69 2z80_A TOLL-like receptor 2, v 100.0 2.3E-31 7.9E-36 294.5 12.8 287 23-353 21-315 (353)
70 4aw2_A Serine/threonine-protei 100.0 1.1E-30 3.7E-35 295.1 15.2 181 716-899 64-249 (437)
71 3ogk_B Coronatine-insensitive 100.0 7.5E-33 2.6E-37 329.1 -4.1 431 31-523 41-526 (592)
72 4fcg_A Uncharacterized protein 100.0 1.1E-29 3.6E-34 277.4 21.0 265 24-353 34-315 (328)
73 2z66_A Variable lymphocyte rec 100.0 3.3E-30 1.1E-34 279.3 16.7 253 29-353 4-262 (306)
74 1wwl_A Monocyte differentiatio 100.0 1.5E-31 5.3E-36 290.3 3.5 253 64-353 39-310 (312)
75 2z66_A Variable lymphocyte rec 100.0 7.8E-30 2.7E-34 276.3 14.5 230 394-624 29-266 (306)
76 3g06_A SSPH2 (leucine-rich rep 100.0 1.7E-29 5.8E-34 296.5 17.6 290 23-417 13-308 (622)
77 3fxz_A Serine/threonine-protei 100.0 3.6E-29 1.2E-33 269.7 18.4 172 724-900 18-190 (297)
78 2vd5_A DMPK protein; serine/th 100.0 1.4E-29 4.6E-34 284.0 15.6 181 716-899 51-236 (412)
79 3ogk_B Coronatine-insensitive 100.0 6.6E-32 2.3E-36 321.0 -4.0 298 313-615 218-547 (592)
80 1o6l_A RAC-beta serine/threoni 100.0 3.1E-29 1.1E-33 274.3 16.7 173 724-900 3-179 (337)
81 3s95_A LIMK-1, LIM domain kina 100.0 5.7E-29 1.9E-33 270.1 18.0 174 724-900 8-196 (310)
82 3v8s_A RHO-associated protein 100.0 3E-29 1E-33 281.0 15.5 179 717-900 60-243 (410)
83 2z80_A TOLL-like receptor 2, v 100.0 6.1E-29 2.1E-33 275.0 17.5 283 237-548 28-315 (353)
84 3zyi_A Leucine-rich repeat-con 100.0 2.1E-28 7.2E-33 280.2 22.5 229 394-624 76-308 (452)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.3E-29 1.1E-33 275.9 15.0 173 723-899 20-197 (353)
86 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-29 1.7E-33 267.1 15.6 221 371-595 14-238 (285)
87 3zyj_A Leucine-rich repeat-con 100.0 2.6E-28 8.9E-33 278.4 22.4 247 372-624 47-297 (440)
88 3fe3_A MAP/microtubule affinit 100.0 4.9E-29 1.7E-33 272.0 15.1 174 722-900 11-187 (328)
89 4dc2_A Protein kinase C IOTA t 100.0 5.3E-29 1.8E-33 277.5 15.6 175 722-900 48-227 (396)
90 1xjd_A Protein kinase C, theta 100.0 6.7E-29 2.3E-33 272.4 15.3 176 721-900 12-192 (345)
91 3niz_A Rhodanese family protei 100.0 1.2E-28 4E-33 267.5 16.6 173 724-900 19-193 (311)
92 3o53_A Protein LRIM1, AGAP0063 100.0 6.1E-30 2.1E-34 278.4 6.4 268 316-624 11-281 (317)
93 3zgw_A Maternal embryonic leuc 100.0 1E-28 3.5E-33 271.0 15.4 173 724-900 8-183 (347)
94 3oja_A Leucine-rich immune mol 100.0 7.3E-30 2.5E-34 293.9 6.2 236 367-614 33-270 (487)
95 3zyi_A Leucine-rich repeat-con 100.0 3.1E-28 1.1E-32 278.8 19.7 246 70-351 56-302 (452)
96 3a8x_A Protein kinase C IOTA t 100.0 1.4E-28 4.9E-33 270.3 16.1 173 724-900 7-184 (345)
97 2c30_A Serine/threonine-protei 100.0 3.2E-28 1.1E-32 265.3 18.1 181 715-900 24-215 (321)
98 4fr4_A YANK1, serine/threonine 100.0 2.2E-28 7.6E-33 271.5 16.8 172 723-899 12-187 (384)
99 2i0e_A Protein kinase C-beta I 100.0 1.4E-28 4.7E-33 270.8 14.9 174 723-900 17-195 (353)
100 1tki_A Titin; serine kinase, m 100.0 3.5E-28 1.2E-32 264.7 17.8 171 725-900 4-177 (321)
101 3o0g_A Cell division protein k 100.0 3.2E-28 1.1E-32 261.8 17.2 171 726-900 2-175 (292)
102 1fot_A TPK1 delta, CAMP-depend 100.0 3.4E-28 1.2E-32 264.1 17.4 170 724-900 4-177 (318)
103 1ozn_A Reticulon 4 receptor; N 100.0 7.5E-28 2.6E-32 257.8 19.4 265 318-616 14-284 (285)
104 2yab_A Death-associated protei 100.0 5E-28 1.7E-32 267.2 18.1 172 724-900 10-192 (361)
105 3uim_A Brassinosteroid insensi 100.0 2.4E-28 8.1E-33 267.3 15.3 184 713-899 17-208 (326)
106 3p86_A Serine/threonine-protei 100.0 1.6E-28 5.6E-33 266.0 13.3 182 715-900 26-213 (309)
107 3c0i_A Peripheral plasma membr 100.0 2.4E-28 8.3E-33 269.7 14.8 174 724-900 22-207 (351)
108 2qkw_B Protein kinase; three-h 100.0 1.8E-28 6.2E-33 267.5 13.6 181 716-899 29-214 (321)
109 2zv2_A Calcium/calmodulin-depe 100.0 4.4E-28 1.5E-32 261.5 16.5 172 724-900 11-211 (298)
110 1ob3_A PFPK5, cell division co 100.0 1.7E-28 5.9E-33 263.3 13.1 171 726-900 2-174 (288)
111 1kob_A Twitchin; kinase, intra 100.0 6.9E-28 2.3E-32 268.5 17.9 172 725-900 50-224 (387)
112 3a62_A Ribosomal protein S6 ki 100.0 2.6E-28 8.8E-33 266.8 14.1 174 723-900 14-195 (327)
113 4hcu_A Tyrosine-protein kinase 100.0 1.7E-28 5.9E-33 260.5 12.2 175 721-899 5-180 (269)
114 3kul_A Ephrin type-A receptor 100.0 4.8E-28 1.7E-32 264.3 15.9 174 723-899 46-227 (325)
115 1wwl_A Monocyte differentiatio 100.0 8E-29 2.7E-33 268.9 9.6 248 146-430 40-309 (312)
116 3soa_A Calcium/calmodulin-depe 100.0 6.1E-28 2.1E-32 273.6 16.8 173 724-900 9-187 (444)
117 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-28 1.3E-32 257.6 14.3 174 722-899 4-178 (268)
118 2psq_A Fibroblast growth facto 100.0 4.5E-28 1.5E-32 269.4 15.3 175 723-900 78-279 (370)
119 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.2E-28 2.1E-32 265.6 16.3 170 724-900 39-212 (350)
120 4eqm_A Protein kinase; transfe 100.0 4.4E-28 1.5E-32 260.8 14.6 173 724-900 9-186 (294)
121 3e7e_A HBUB1, BUB1A, mitotic c 99.9 5.9E-28 2E-32 268.4 15.6 174 721-900 60-259 (365)
122 2r5t_A Serine/threonine-protei 99.9 2.7E-28 9.4E-33 270.3 12.8 174 723-900 35-213 (373)
123 2pmi_A Negative RE, cyclin-dep 99.9 7.7E-28 2.6E-32 261.9 16.2 173 724-900 3-182 (317)
124 3c4z_A Rhodopsin kinase; Ser/T 99.9 8.4E-28 2.9E-32 277.2 17.0 175 723-900 182-363 (543)
125 3qd2_B Eukaryotic translation 99.9 1.2E-27 4E-32 262.4 16.9 173 725-900 5-250 (332)
126 3tki_A Serine/threonine-protei 99.9 7.3E-28 2.5E-32 262.6 14.9 172 725-900 6-181 (323)
127 2y0a_A Death-associated protei 99.9 1.9E-27 6.5E-32 259.8 17.9 170 725-899 10-190 (326)
128 2acx_A G protein-coupled recep 99.9 1.2E-27 4E-32 276.5 16.9 174 723-900 181-359 (576)
129 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-26 5.2E-31 271.5 26.3 269 291-606 40-308 (622)
130 3zyj_A Leucine-rich repeat-con 99.9 6E-27 2E-31 267.1 22.2 249 293-596 45-293 (440)
131 3h4j_B AMPK kdaid, SNF1-like p 99.9 8.2E-28 2.8E-32 262.7 14.4 170 725-900 8-181 (336)
132 3oja_A Leucine-rich immune mol 99.9 4.8E-28 1.7E-32 278.7 12.9 216 394-620 35-251 (487)
133 2bdw_A Hypothetical protein K1 99.9 1.7E-27 5.7E-32 263.8 16.2 172 724-900 27-204 (362)
134 3o53_A Protein LRIM1, AGAP0063 99.9 1.6E-28 5.6E-33 267.1 7.8 265 153-459 14-281 (317)
135 3soc_A Activin receptor type-2 99.9 1.5E-27 5E-32 260.3 15.1 172 722-900 20-207 (322)
136 3cbl_A C-FES, proto-oncogene t 99.9 4.3E-28 1.5E-32 270.4 11.0 176 721-899 109-288 (377)
137 2x4f_A Myosin light chain kina 99.9 1.8E-27 6.2E-32 264.5 15.8 167 729-899 92-261 (373)
138 3gen_A Tyrosine-protein kinase 99.9 7E-28 2.4E-32 257.9 12.0 176 720-899 18-194 (283)
139 3cok_A Serine/threonine-protei 99.9 2.2E-27 7.7E-32 253.2 15.8 173 724-899 9-185 (278)
140 2y94_A 5'-AMP-activated protei 99.9 2.4E-27 8.3E-32 270.4 16.9 172 724-900 14-189 (476)
141 2izr_A Casein kinase I isoform 99.9 1.9E-27 6.4E-32 260.5 15.3 171 724-900 7-191 (330)
142 3p1a_A MYT1 kinase, membrane-a 99.9 1.3E-27 4.3E-32 259.5 13.7 171 724-899 55-229 (311)
143 3ugc_A Tyrosine-protein kinase 99.9 6.9E-28 2.4E-32 259.6 11.5 174 723-899 7-190 (295)
144 4ejn_A RAC-alpha serine/threon 99.9 5.4E-28 1.8E-32 276.1 11.2 175 722-900 144-323 (446)
145 2qol_A Ephrin receptor; recept 99.9 9.4E-28 3.2E-32 266.9 12.8 174 723-899 42-223 (373)
146 4euu_A Serine/threonine-protei 99.9 3.2E-27 1.1E-31 257.4 16.2 172 724-899 7-188 (319)
147 3vhe_A Vascular endothelial gr 99.9 1.5E-27 5.3E-32 264.6 13.7 183 714-899 10-268 (359)
148 3kn6_A Ribosomal protein S6 ki 99.9 3.5E-27 1.2E-31 257.4 16.1 167 727-900 9-183 (325)
149 3f3z_A Calcium/calmodulin-depe 99.9 4.8E-27 1.6E-31 250.5 16.8 170 725-899 8-181 (277)
150 3uc3_A Serine/threonine-protei 99.9 2.5E-27 8.5E-32 262.4 14.7 172 723-900 17-191 (361)
151 4agu_A Cyclin-dependent kinase 99.9 4.1E-27 1.4E-31 255.6 16.1 171 725-899 2-175 (311)
152 2vuw_A Serine/threonine-protei 99.9 2.7E-28 9.1E-33 268.0 6.7 168 723-900 17-251 (336)
153 3rp9_A Mitogen-activated prote 99.9 2.6E-27 8.7E-32 271.7 14.7 170 725-899 52-256 (458)
154 3mtl_A Cell division protein k 99.9 1.4E-27 4.8E-32 260.7 11.7 171 726-900 2-174 (324)
155 3pfq_A PKC-B, PKC-beta, protei 99.9 4.1E-27 1.4E-31 280.8 16.6 175 722-900 337-516 (674)
156 4fvq_A Tyrosine-protein kinase 99.9 1.3E-27 4.5E-32 256.5 11.1 171 723-900 5-191 (289)
157 2qr7_A Ribosomal protein S6 ki 99.9 3.9E-27 1.3E-31 258.5 15.1 169 723-899 19-193 (342)
158 3gni_B Strad alpha; kinase fol 99.9 6.5E-27 2.2E-31 262.4 16.9 175 723-900 22-209 (389)
159 3dls_A PAS domain-containing s 99.9 3.4E-27 1.2E-31 258.6 14.1 172 724-900 22-203 (335)
160 3t9t_A Tyrosine-protein kinase 99.9 1.7E-27 5.9E-32 252.4 11.3 174 722-899 4-178 (267)
161 2rku_A Serine/threonine-protei 99.9 9.9E-27 3.4E-31 250.4 17.4 173 724-900 13-189 (294)
162 1ua2_A CAK, cell division prot 99.9 2.4E-27 8.1E-32 261.4 12.7 173 723-899 7-185 (346)
163 3n9x_A Phosphotransferase; mal 99.9 5.1E-27 1.7E-31 266.6 15.7 171 724-899 24-224 (432)
164 1luf_A Muscle-specific tyrosin 99.9 2.2E-27 7.6E-32 261.5 12.3 178 719-899 40-249 (343)
165 2owb_A Serine/threonine-protei 99.9 8.4E-27 2.9E-31 255.8 16.8 173 724-900 39-215 (335)
166 4e5w_A Tyrosine-protein kinase 99.9 6E-27 2.1E-31 253.1 15.4 173 724-899 19-202 (302)
167 3tt0_A Basic fibroblast growth 99.9 4.3E-27 1.5E-31 263.0 14.7 176 722-900 65-267 (382)
168 2nru_A Interleukin-1 receptor- 99.9 2.1E-26 7.3E-31 249.4 19.7 183 713-899 12-208 (307)
169 1rjb_A FL cytokine receptor; k 99.9 4.6E-27 1.6E-31 259.1 14.6 177 720-899 39-247 (344)
170 1mp8_A Focal adhesion kinase 1 99.9 2.2E-27 7.4E-32 253.8 10.9 174 722-899 11-190 (281)
171 3ork_A Serine/threonine protei 99.9 1.4E-27 4.7E-32 259.3 9.5 173 724-900 10-193 (311)
172 2w4o_A Calcium/calmodulin-depe 99.9 5.5E-27 1.9E-31 258.5 14.4 170 724-900 51-224 (349)
173 3llt_A Serine/threonine kinase 99.9 7.1E-27 2.4E-31 259.3 15.3 181 712-900 21-233 (360)
174 1u5q_A Serine/threonine protei 99.9 5.3E-27 1.8E-31 258.2 14.1 167 725-899 53-223 (348)
175 2ivs_A Proto-oncogene tyrosine 99.9 5E-27 1.7E-31 255.2 13.4 176 721-899 18-225 (314)
176 2a2a_A Death-associated protei 99.9 1.3E-26 4.5E-31 252.7 16.6 170 725-899 11-191 (321)
177 3lxl_A Tyrosine-protein kinase 99.9 7.7E-27 2.6E-31 255.3 14.7 174 723-899 20-203 (327)
178 2j7t_A Serine/threonine-protei 99.9 2.5E-27 8.7E-32 256.1 10.5 173 724-899 17-190 (302)
179 3com_A Serine/threonine-protei 99.9 1.7E-26 5.9E-31 251.0 16.6 173 723-900 26-199 (314)
180 2o6q_A Variable lymphocyte rec 99.9 3.1E-26 1.1E-30 243.0 18.2 217 29-277 2-218 (270)
181 1csn_A Casein kinase-1; phosph 99.9 2.6E-26 9.1E-31 247.5 18.0 172 723-900 7-192 (298)
182 3is5_A Calcium-dependent prote 99.9 9.5E-27 3.2E-31 249.3 14.3 171 725-899 21-199 (285)
183 1opk_A P150, C-ABL, proto-onco 99.9 3.9E-27 1.3E-31 271.9 12.1 175 721-899 215-392 (495)
184 3oz6_A Mitogen-activated prote 99.9 1.2E-26 4.1E-31 260.1 15.6 171 724-900 7-204 (388)
185 3kfa_A Tyrosine-protein kinase 99.9 3.4E-27 1.2E-31 253.2 10.6 177 719-899 6-185 (288)
186 3a7i_A MST3 kinase, serine/thr 99.9 2.7E-26 9.1E-31 248.2 17.6 172 724-900 20-193 (303)
187 3lb7_A RAF proto-oncogene seri 99.9 6.6E-27 2.3E-31 253.1 12.9 172 722-899 32-207 (307)
188 1qpc_A LCK kinase; alpha beta 99.9 6.5E-27 2.2E-31 249.7 12.6 175 720-899 7-183 (279)
189 2eue_A Carbon catabolite derep 99.9 1.2E-26 4.2E-31 247.1 14.6 170 725-900 12-185 (275)
190 4f0f_A Serine/threonine-protei 99.9 2.3E-26 7.9E-31 246.6 16.8 168 723-898 16-198 (287)
191 1t46_A HOMO sapiens V-KIT hard 99.9 7.2E-27 2.5E-31 253.9 13.0 176 721-899 18-220 (313)
192 2pvf_A Fibroblast growth facto 99.9 1.5E-26 5E-31 253.9 15.5 176 721-899 30-232 (334)
193 3l9p_A Anaplastic lymphoma kin 99.9 2.7E-27 9.1E-32 262.9 9.5 174 723-899 68-259 (367)
194 3gbz_A Kinase, CMGC CDK; ssgci 99.9 4.6E-27 1.6E-31 257.2 11.3 174 722-900 30-211 (329)
195 1vzo_A Ribosomal protein S6 ki 99.9 4.6E-27 1.6E-31 259.9 11.4 172 724-899 52-233 (355)
196 4eut_A Serine/threonine-protei 99.9 9.3E-27 3.2E-31 261.5 14.0 172 724-899 7-188 (396)
197 3qup_A Tyrosine-protein kinase 99.9 4.4E-27 1.5E-31 256.9 11.0 178 719-899 16-212 (323)
198 4aaa_A Cyclin-dependent kinase 99.9 1.3E-26 4.3E-31 254.0 14.7 172 724-899 23-197 (331)
199 1qcf_A Haematopoetic cell kina 99.9 2.4E-27 8.2E-32 271.1 9.3 175 720-899 182-358 (454)
200 3q4u_A Activin receptor type-1 99.9 2.2E-26 7.5E-31 248.6 16.3 171 724-900 6-191 (301)
201 2ac3_A MAP kinase-interacting 99.9 1.9E-26 6.6E-31 250.9 16.0 171 725-899 11-194 (316)
202 3kk8_A Calcium/calmodulin depe 99.9 2.8E-26 9.5E-31 245.5 16.9 172 724-900 4-181 (284)
203 3mi9_A Cell division protein k 99.9 1.8E-26 6.1E-31 255.1 15.8 172 725-900 16-202 (351)
204 2clq_A Mitogen-activated prote 99.9 3.1E-26 1.1E-30 246.5 17.2 171 726-899 22-196 (295)
205 1k9a_A Carboxyl-terminal SRC k 99.9 1.2E-26 4E-31 264.9 14.6 172 720-900 187-360 (450)
206 3fdn_A Serine/threonine-protei 99.9 1.6E-26 5.4E-31 246.8 14.6 172 723-900 6-181 (279)
207 1nxk_A MAP kinase-activated pr 99.9 1.9E-26 6.5E-31 258.8 15.8 167 725-900 60-237 (400)
208 3ttj_A Mitogen-activated prote 99.9 1.1E-26 3.7E-31 265.5 14.0 169 724-900 60-237 (464)
209 1x8b_A WEE1HU, WEE1-like prote 99.9 2.9E-26 9.8E-31 245.9 16.4 169 725-900 10-204 (289)
210 3g33_A Cell division protein k 99.9 2.2E-26 7.5E-31 249.4 15.5 173 723-900 6-193 (308)
211 3hko_A Calcium/calmodulin-depe 99.9 1.1E-26 3.8E-31 256.1 13.4 175 722-899 22-247 (345)
212 3pg1_A Mitogen-activated prote 99.9 1.8E-26 6.1E-31 256.3 15.0 180 716-900 12-207 (362)
213 1u59_A Tyrosine-protein kinase 99.9 1.5E-26 5E-31 248.1 13.7 173 723-899 6-186 (287)
214 2y7j_A Phosphorylase B kinase 99.9 3.3E-26 1.1E-30 253.9 17.1 174 721-899 89-272 (365)
215 3dbq_A Dual specificity protei 99.9 1.6E-26 5.5E-31 254.5 14.3 171 723-899 6-182 (343)
216 3mdy_A Bone morphogenetic prot 99.9 3.6E-26 1.2E-30 251.1 17.0 173 719-900 30-220 (337)
217 2buj_A Serine/threonine-protei 99.9 2.3E-26 7.9E-31 250.4 15.3 175 722-899 25-216 (317)
218 3i6u_A CDS1, serine/threonine- 99.9 1.5E-26 5.1E-31 261.5 14.2 170 724-899 133-314 (419)
219 3lij_A Calcium/calmodulin depe 99.9 2.5E-26 8.7E-31 265.7 16.4 170 725-899 36-211 (494)
220 3op5_A Serine/threonine-protei 99.9 1.2E-26 4.3E-31 257.6 13.2 174 723-900 32-235 (364)
221 2yex_A Serine/threonine-protei 99.9 3.8E-26 1.3E-30 243.3 16.1 173 724-900 5-181 (276)
222 1p4o_A Insulin-like growth fac 99.9 5.6E-27 1.9E-31 255.9 9.8 181 716-899 15-213 (322)
223 3poz_A Epidermal growth factor 99.9 1.2E-26 4E-31 253.8 12.3 173 724-900 13-193 (327)
224 2wqm_A Serine/threonine-protei 99.9 3.5E-26 1.2E-30 248.1 15.9 174 724-900 30-210 (310)
225 3bhy_A Death-associated protei 99.9 4.8E-26 1.7E-30 243.5 16.8 170 725-899 4-184 (283)
226 3q5i_A Protein kinase; CDPK, m 99.9 4.6E-26 1.6E-30 264.2 17.8 171 724-899 34-221 (504)
227 2xir_A Vascular endothelial gr 99.9 1.5E-26 5.3E-31 251.6 13.0 182 715-899 16-223 (316)
228 2zmd_A Dual specificity protei 99.9 3E-26 1E-30 256.4 15.5 171 724-900 54-230 (390)
229 3mwu_A Calmodulin-domain prote 99.9 2.6E-26 8.9E-31 265.2 15.5 171 724-899 20-196 (486)
230 1zy4_A Serine/threonine-protei 99.9 2.2E-26 7.5E-31 248.7 14.0 171 725-899 5-203 (303)
231 2x7f_A TRAF2 and NCK-interacti 99.9 1.2E-26 4.1E-31 253.7 12.0 180 716-899 14-202 (326)
232 2w1i_A JAK2; chromosomal rearr 99.9 3.7E-26 1.3E-30 249.7 15.9 174 723-899 38-221 (326)
233 1cm8_A Phosphorylated MAP kina 99.9 2.3E-26 7.9E-31 255.2 14.4 167 725-900 24-199 (367)
234 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 6.7E-27 2.3E-31 267.1 10.2 175 720-899 178-354 (452)
235 2i1m_A Macrophage colony-stimu 99.9 1.3E-26 4.4E-31 254.3 12.0 177 720-899 40-239 (333)
236 2vgo_A Serine/threonine-protei 99.9 4.7E-26 1.6E-30 243.7 16.0 172 723-900 11-186 (284)
237 2z62_A TOLL-like receptor 4, v 99.9 8.3E-26 2.8E-30 240.7 17.8 210 394-625 29-243 (276)
238 3kex_A Receptor tyrosine-prote 99.9 1E-26 3.5E-31 254.0 10.9 172 724-899 11-190 (325)
239 2pml_X PFPK7, Ser/Thr protein 99.9 2.8E-26 9.5E-31 253.3 14.2 171 724-900 29-224 (348)
240 2jam_A Calcium/calmodulin-depe 99.9 3.4E-26 1.1E-30 247.5 14.2 171 724-900 7-181 (304)
241 1phk_A Phosphorylase kinase; g 99.9 7.5E-26 2.6E-30 244.0 17.0 172 723-899 14-196 (298)
242 3f66_A Hepatocyte growth facto 99.9 3.5E-26 1.2E-30 246.6 14.3 173 724-899 23-205 (298)
243 3dtc_A Mitogen-activated prote 99.9 3E-26 1E-30 243.4 13.5 168 724-899 5-187 (271)
244 2h6d_A 5'-AMP-activated protei 99.9 3.5E-26 1.2E-30 243.6 14.1 173 723-900 8-184 (276)
245 1mqb_A Ephrin type-A receptor 99.9 3E-26 1E-30 251.1 13.8 174 723-899 41-223 (333)
246 2h34_A Serine/threonine-protei 99.9 4.3E-26 1.5E-30 247.2 14.7 172 724-899 32-208 (309)
247 3eb0_A Putative uncharacterize 99.9 6.3E-26 2.2E-30 253.7 16.5 170 722-900 3-215 (383)
248 3nyv_A Calmodulin-domain prote 99.9 2.2E-26 7.6E-31 265.8 13.2 171 724-899 24-201 (484)
249 2a19_B Interferon-induced, dou 99.9 4.2E-26 1.4E-30 244.0 14.3 168 724-899 9-194 (284)
250 3g2f_A Bone morphogenetic prot 99.9 5.4E-26 1.8E-30 249.7 15.5 170 722-900 9-202 (336)
251 3og7_A AKAP9-BRAF fusion prote 99.9 2E-26 6.7E-31 247.4 11.6 173 721-899 19-195 (289)
252 3cc6_A Protein tyrosine kinase 99.9 3E-26 1E-30 244.8 12.6 173 723-899 9-187 (281)
253 3kmu_A ILK, integrin-linked ki 99.9 3.4E-26 1.2E-30 242.9 12.9 169 723-900 7-182 (271)
254 2r3i_A Cell division protein k 99.9 4E-26 1.4E-30 246.3 13.5 172 725-900 2-177 (299)
255 3eqc_A Dual specificity mitoge 99.9 2.1E-26 7.3E-31 255.4 11.7 172 723-900 30-204 (360)
256 2p1m_B Transport inhibitor res 99.9 6.6E-29 2.3E-33 295.3 -9.3 351 262-617 154-542 (594)
257 3lxp_A Non-receptor tyrosine-p 99.9 1.2E-25 4.1E-30 244.7 17.1 170 726-900 30-211 (318)
258 2vwi_A Serine/threonine-protei 99.9 1.3E-26 4.3E-31 250.6 9.2 177 720-899 9-199 (303)
259 3c1x_A Hepatocyte growth facto 99.9 2.3E-26 7.9E-31 255.4 11.4 171 726-899 89-269 (373)
260 2w5a_A Serine/threonine-protei 99.9 1.7E-26 5.9E-31 246.4 9.8 173 725-900 5-190 (279)
261 4azs_A Methyltransferase WBDD; 99.9 1.5E-26 5E-31 269.9 10.1 160 733-899 241-412 (569)
262 2ycf_A Serine/threonine-protei 99.9 5.8E-26 2E-30 247.8 13.7 169 725-899 9-189 (322)
263 3nsz_A CK II alpha, casein kin 99.9 1.5E-25 5.1E-30 245.5 17.0 166 724-900 34-204 (330)
264 3byv_A Rhoptry kinase; malaria 99.9 1.6E-26 5.4E-31 257.9 9.3 169 724-900 71-276 (377)
265 3fme_A Dual specificity mitoge 99.9 3.8E-26 1.3E-30 245.2 11.8 171 723-898 4-181 (290)
266 1xbb_A Tyrosine-protein kinase 99.9 6.6E-26 2.2E-30 243.5 13.6 175 720-899 10-193 (291)
267 1t4h_A Serine/threonine-protei 99.9 1.8E-25 6.2E-30 240.0 17.0 170 724-899 24-203 (290)
268 3brb_A Proto-oncogene tyrosine 99.9 5.1E-26 1.8E-30 247.2 12.8 180 717-899 25-222 (313)
269 3lm5_A Serine/threonine-protei 99.9 7.3E-26 2.5E-30 247.4 14.0 177 720-900 22-207 (327)
270 3lzb_A Epidermal growth factor 99.9 4.9E-26 1.7E-30 248.7 12.6 172 724-899 13-192 (327)
271 2eva_A TAK1 kinase - TAB1 chim 99.9 8.8E-26 3E-30 244.4 14.4 169 724-900 6-177 (307)
272 2h8h_A Proto-oncogene tyrosine 99.9 1.4E-26 4.7E-31 269.9 8.4 175 720-899 261-437 (535)
273 3ll6_A Cyclin G-associated kin 99.9 5.8E-26 2E-30 249.4 12.8 174 721-898 23-222 (337)
274 3pls_A Macrophage-stimulating 99.9 1E-25 3.5E-30 242.9 14.3 171 727-900 22-202 (298)
275 2xrw_A Mitogen-activated prote 99.9 1.2E-25 4.3E-30 250.0 15.0 168 725-900 24-200 (371)
276 2wtk_C Serine/threonine-protei 99.9 2E-25 6.8E-30 241.5 16.2 172 725-900 4-185 (305)
277 2fst_X Mitogen-activated prote 99.9 4.9E-26 1.7E-30 252.3 11.6 168 724-900 27-203 (367)
278 3gxj_A TGF-beta receptor type- 99.9 1.4E-26 4.6E-31 250.4 6.9 170 725-900 2-186 (303)
279 2p1m_B Transport inhibitor res 99.9 9.3E-29 3.2E-33 294.0 -11.2 163 416-594 371-543 (594)
280 3qyz_A Mitogen-activated prote 99.9 1.7E-25 5.7E-30 248.5 15.8 170 724-899 25-204 (364)
281 2v62_A Serine/threonine-protei 99.9 5.6E-26 1.9E-30 250.3 11.9 172 724-900 35-234 (345)
282 1fvr_A Tyrosine-protein kinase 99.9 9.7E-26 3.3E-30 246.6 13.4 172 724-899 23-214 (327)
283 4hgt_A Casein kinase I isoform 99.9 2.1E-25 7E-30 240.2 15.8 171 724-900 7-189 (296)
284 2ozo_A Tyrosine-protein kinase 99.9 7.1E-26 2.4E-30 267.6 12.9 172 724-899 333-512 (613)
285 3an0_A Dual specificity mitoge 99.9 6.7E-26 2.3E-30 249.3 11.8 173 722-899 47-226 (340)
286 1u46_A ACK-1, activated CDC42 99.9 1E-25 3.4E-30 242.1 12.8 173 723-899 15-197 (291)
287 2o6q_A Variable lymphocyte rec 99.9 1.1E-24 3.6E-29 231.2 20.1 206 395-624 18-223 (270)
288 3uzp_A CKI-delta, CKID, casein 99.9 3.3E-25 1.1E-29 238.7 16.4 171 724-900 7-189 (296)
289 3kvw_A DYRK2, dual specificity 99.9 1.7E-25 5.9E-30 253.4 14.4 170 723-900 94-273 (429)
290 2yfx_A Tyrosine-protein kinase 99.9 9E-26 3.1E-30 246.8 11.6 174 723-899 27-218 (327)
291 4e7w_A Glycogen synthase kinas 99.9 1.6E-25 5.6E-30 250.9 14.0 169 724-900 38-215 (394)
292 2i6l_A Mitogen-activated prote 99.9 2.4E-25 8.4E-30 242.5 14.9 169 725-899 10-197 (320)
293 1j1b_A Glycogen synthase kinas 99.9 2.7E-25 9.2E-30 251.3 15.7 167 725-900 53-230 (420)
294 3sv0_A Casein kinase I-like; t 99.9 4.6E-25 1.6E-29 252.0 17.7 171 724-900 5-187 (483)
295 3q60_A ROP5B; pseudokinase, tr 99.9 6E-26 2E-30 252.8 9.9 169 725-900 61-265 (371)
296 1byg_A CSK, protein (C-termina 99.9 4.9E-26 1.7E-30 242.8 8.3 169 722-899 17-187 (278)
297 1b6c_B TGF-B superfamily recep 99.9 6.3E-25 2.2E-29 241.8 17.1 177 718-900 34-225 (342)
298 2b9h_A MAP kinase FUS3, mitoge 99.9 4.2E-25 1.4E-29 244.3 15.5 170 724-899 9-195 (353)
299 3rgf_A Cyclin-dependent kinase 99.9 2E-25 6.7E-30 251.6 12.8 170 725-900 19-209 (405)
300 2j0j_A Focal adhesion kinase 1 99.9 2.1E-25 7.3E-30 265.1 13.6 177 719-899 383-565 (656)
301 2jii_A Serine/threonine-protei 99.9 8.7E-26 3E-30 249.6 9.5 167 725-900 41-242 (352)
302 1wak_A Serine/threonine-protei 99.9 2.6E-25 9E-30 250.2 12.7 169 724-900 35-267 (397)
303 1blx_A Cyclin-dependent kinase 99.9 5.3E-25 1.8E-29 240.6 14.6 172 724-900 9-193 (326)
304 4exu_A Mitogen-activated prote 99.9 3.7E-25 1.3E-29 246.3 13.2 166 725-900 41-215 (371)
305 2wei_A Calmodulin-domain prote 99.9 5E-25 1.7E-29 236.2 13.4 172 723-899 19-196 (287)
306 4fl3_A Tyrosine-protein kinase 99.9 2.1E-25 7.3E-30 264.1 11.4 164 732-900 375-546 (635)
307 2y4i_B KSR2, HKSR2, kinase sup 99.9 7.6E-26 2.6E-30 246.5 6.8 179 716-900 23-208 (319)
308 1z57_A Dual specificity protei 99.9 8.8E-25 3E-29 240.1 15.1 169 724-900 12-208 (339)
309 3p23_A Serine/threonine-protei 99.9 1.6E-25 5.6E-30 253.3 9.5 171 722-899 20-199 (432)
310 2pzi_A Probable serine/threoni 99.9 3.1E-25 1.1E-29 266.5 12.4 165 724-899 78-250 (681)
311 3e3p_A Protein kinase, putativ 99.9 1E-24 3.4E-29 242.0 15.6 176 720-899 17-204 (360)
312 3a99_A Proto-oncogene serine/t 99.9 5E-25 1.7E-29 240.0 12.6 175 719-899 36-221 (320)
313 3cek_A Dual specificity protei 99.9 2.9E-25 9.8E-30 241.3 10.6 179 716-900 18-202 (313)
314 2z62_A TOLL-like receptor 4, v 99.9 4.4E-24 1.5E-28 227.3 19.5 207 369-598 29-240 (276)
315 2iwi_A Serine/threonine-protei 99.9 3.1E-25 1.1E-29 240.8 10.3 174 720-899 25-211 (312)
316 1p9a_G Platelet glycoprotein I 99.9 3.4E-24 1.2E-28 229.3 17.9 137 484-622 75-211 (290)
317 3rfs_A Internalin B, repeat mo 99.9 1.1E-24 3.6E-29 231.4 13.8 180 149-356 19-198 (272)
318 3coi_A Mitogen-activated prote 99.9 6.3E-25 2.2E-29 242.8 12.4 166 725-900 23-197 (353)
319 3aln_A Dual specificity mitoge 99.9 1.2E-24 4E-29 238.0 14.2 171 723-898 19-197 (327)
320 2vx3_A Dual specificity tyrosi 99.9 1.3E-24 4.6E-29 242.8 14.6 175 720-900 48-232 (382)
321 3rfs_A Internalin B, repeat mo 99.9 1.5E-24 5.2E-29 230.2 14.0 202 415-625 39-241 (272)
322 1p9a_G Platelet glycoprotein I 99.9 5.7E-24 2E-28 227.6 18.3 206 437-647 6-213 (290)
323 3fhr_A MAP kinase-activated pr 99.9 2.4E-24 8.2E-29 236.2 15.0 167 724-899 26-202 (336)
324 2eu9_A Dual specificity protei 99.9 2.4E-24 8.1E-29 238.4 14.9 169 724-900 17-213 (355)
325 2ast_B S-phase kinase-associat 99.9 3.1E-26 1.1E-30 251.6 -0.7 269 29-335 34-313 (336)
326 2dyl_A Dual specificity mitoge 99.9 1.8E-24 6.2E-29 235.4 13.1 172 723-899 22-197 (318)
327 2rio_A Serine/threonine-protei 99.9 1.8E-24 6.2E-29 245.6 13.2 168 726-900 15-206 (434)
328 3qa8_A MGC80376 protein; kinas 99.9 7.8E-25 2.7E-29 255.2 9.6 172 725-900 13-197 (676)
329 3m19_A Variable lymphocyte rec 99.9 9.8E-24 3.4E-28 221.1 15.6 192 29-278 2-193 (251)
330 3m19_A Variable lymphocyte rec 99.9 2.4E-23 8.3E-28 218.1 18.1 182 442-624 15-197 (251)
331 1q8y_A SR protein kinase; tran 99.9 3.1E-24 1.1E-28 239.3 11.9 169 724-900 17-209 (373)
332 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.9E-28 228.1 13.2 207 117-352 91-307 (310)
333 3en9_A Glycoprotease, O-sialog 99.9 3.5E-24 1.2E-28 248.5 9.7 157 729-900 339-510 (540)
334 3goz_A Leucine-rich repeat-con 99.9 4.4E-25 1.5E-29 244.8 1.7 181 49-277 3-209 (362)
335 4glp_A Monocyte differentiatio 99.9 8E-24 2.8E-28 229.3 11.1 198 417-620 91-308 (310)
336 3goz_A Leucine-rich repeat-con 99.9 8.8E-25 3E-29 242.3 3.1 250 373-623 3-301 (362)
337 2ca6_A RAN GTPase-activating p 99.9 3.1E-25 1.1E-29 248.5 -1.0 197 141-355 86-319 (386)
338 2xwt_C Thyrotropin receptor; s 99.9 5.1E-23 1.8E-27 214.0 14.7 197 393-616 31-236 (239)
339 3cvr_A Invasion plasmid antige 99.9 7E-24 2.4E-28 245.7 8.2 205 23-283 34-249 (571)
340 3uqc_A Probable conserved tran 99.9 7.4E-23 2.5E-27 218.6 13.6 145 724-874 29-177 (286)
341 2ast_B S-phase kinase-associat 99.9 2.6E-24 9E-29 236.2 2.0 126 70-207 49-178 (336)
342 2ca6_A RAN GTPase-activating p 99.9 9.2E-25 3.2E-29 244.6 -3.2 236 387-623 27-320 (386)
343 3m2w_A MAP kinase-activated pr 99.9 1.3E-22 4.6E-27 218.5 13.6 148 725-880 16-174 (299)
344 2xwt_C Thyrotropin receptor; s 99.9 3.6E-22 1.2E-26 207.6 15.9 196 369-592 32-236 (239)
345 1h6u_A Internalin H; cell adhe 99.9 3.6E-22 1.2E-26 215.7 15.4 190 394-620 42-231 (308)
346 3dzo_A Rhoptry kinase domain; 99.9 6.3E-23 2.1E-27 231.3 9.6 167 724-898 76-279 (413)
347 1h6u_A Internalin H; cell adhe 99.9 4.3E-22 1.5E-26 215.2 15.5 151 145-329 81-231 (308)
348 1zar_A RIO2 kinase; serine kin 99.9 2.1E-22 7.3E-27 213.9 10.7 152 718-898 82-251 (282)
349 2o6s_A Variable lymphocyte rec 99.9 9.9E-22 3.4E-26 199.5 14.2 156 28-208 3-159 (208)
350 4ay9_X Follicle-stimulating ho 99.9 6.8E-21 2.3E-25 209.9 18.7 224 235-471 5-232 (350)
351 4ay9_X Follicle-stimulating ho 99.9 2.7E-21 9.1E-26 213.1 15.2 215 371-611 12-231 (350)
352 4b8c_D Glucose-repressible alc 99.9 1.2E-22 4E-27 244.4 4.3 214 5-282 129-359 (727)
353 2o6s_A Variable lymphocyte rec 99.8 6E-21 2E-25 193.8 14.4 172 445-624 11-183 (208)
354 3cvr_A Invasion plasmid antige 99.8 5.6E-21 1.9E-25 221.4 16.0 189 369-607 60-255 (571)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 2.4E-21 8.2E-26 198.2 10.5 156 466-624 15-171 (220)
356 2xot_A Amphoterin-induced prot 99.8 5.8E-21 2E-25 211.3 12.9 178 445-623 22-206 (361)
357 2v9t_B SLIT homolog 2 protein 99.8 5.8E-21 2E-25 195.3 10.6 138 486-623 32-169 (220)
358 3e6j_A Variable lymphocyte rec 99.8 4.6E-20 1.6E-24 190.0 15.2 163 23-210 10-172 (229)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-20 2.6E-24 187.0 14.6 154 445-599 15-170 (220)
360 1dce_A Protein (RAB geranylger 99.8 3.6E-22 1.2E-26 232.8 -4.4 204 65-322 346-567 (567)
361 1m9s_A Internalin B; cell inva 99.8 3.8E-20 1.3E-24 217.0 12.1 173 146-354 40-212 (605)
362 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.9E-24 194.3 14.8 126 66-210 44-169 (291)
363 2v9t_B SLIT homolog 2 protein 99.8 1.6E-19 5.6E-24 184.6 14.6 152 444-596 14-166 (220)
364 3e6j_A Variable lymphocyte rec 99.8 2.7E-19 9.1E-24 184.3 15.0 157 463-623 20-176 (229)
365 1m9s_A Internalin B; cell inva 99.8 2.4E-19 8.1E-24 210.2 16.3 173 64-278 39-211 (605)
366 1dce_A Protein (RAB geranylger 99.8 4.8E-22 1.6E-26 231.8 -7.5 166 429-613 397-567 (567)
367 1h6t_A Internalin B; cell adhe 99.8 4E-19 1.4E-23 190.0 13.6 167 394-595 47-213 (291)
368 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.9E-24 191.2 7.9 170 66-278 17-186 (263)
369 2xot_A Amphoterin-induced prot 99.8 5.3E-19 1.8E-23 195.5 12.5 121 476-596 78-203 (361)
370 4ezg_A Putative uncharacterize 99.8 6.8E-19 2.3E-23 176.8 11.0 153 89-277 41-194 (197)
371 1zth_A RIO1 serine protein kin 99.8 1.6E-19 5.5E-24 189.4 6.4 148 720-879 41-222 (258)
372 4b8c_D Glucose-repressible alc 99.8 1.2E-19 4.1E-24 218.2 6.0 196 68-325 173-369 (727)
373 1xeu_A Internalin C; cellular 99.8 9.8E-19 3.3E-23 184.0 11.4 171 147-354 17-187 (263)
374 1w8a_A SLIT protein; signaling 99.8 5.8E-19 2E-23 176.4 8.8 131 465-598 11-142 (192)
375 1w8a_A SLIT protein; signaling 99.8 4.7E-18 1.6E-22 169.8 13.8 156 489-647 11-167 (192)
376 4ezg_A Putative uncharacterize 99.7 5.7E-18 1.9E-22 170.0 12.8 153 170-352 41-194 (197)
377 3sb4_A Hypothetical leucine ri 99.7 2.1E-17 7.1E-22 180.3 10.3 87 476-564 240-327 (329)
378 2wfh_A SLIT homolog 2 protein 99.7 2E-17 6.9E-22 165.1 9.1 131 489-623 13-143 (193)
379 3sb4_A Hypothetical leucine ri 99.7 8.1E-18 2.8E-22 183.6 5.2 102 509-612 225-327 (329)
380 4gyi_A RIO2 kinase; protein ki 99.7 3.2E-17 1.1E-21 177.9 6.3 148 720-879 89-268 (397)
381 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.6E-21 155.5 10.1 132 486-619 24-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 2E-16 6.7E-21 154.3 9.6 137 462-601 24-165 (168)
383 2je0_A Acidic leucine-rich nuc 99.7 1.8E-16 6E-21 151.3 8.9 128 486-615 17-149 (149)
384 2o6r_A Variable lymphocyte rec 99.6 4.1E-16 1.4E-20 153.5 11.6 132 489-623 10-141 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 3.2E-16 1.1E-20 149.5 8.6 128 462-591 17-149 (149)
386 1ds9_A Outer arm dynein; leuci 99.6 1.7E-17 6E-22 166.6 -2.0 151 64-270 14-180 (198)
387 2o6r_A Variable lymphocyte rec 99.6 2.3E-15 7.8E-20 148.1 13.0 133 464-599 9-141 (177)
388 2wfh_A SLIT homolog 2 protein 99.6 3E-15 1E-19 149.3 12.7 127 466-596 14-140 (193)
389 1a9n_A U2A', U2A'; complex (nu 99.6 3E-15 1E-19 147.1 9.0 135 481-620 14-154 (176)
390 4fdw_A Leucine rich hypothetic 99.6 2.7E-14 9.1E-19 159.1 17.3 130 486-619 248-383 (401)
391 4fdw_A Leucine rich hypothetic 99.6 3.7E-14 1.3E-18 157.9 18.2 174 394-595 204-383 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.5 8.1E-15 2.8E-19 144.0 9.2 134 62-211 13-154 (176)
393 1ds9_A Outer arm dynein; leuci 99.5 8E-17 2.7E-21 161.7 -5.3 133 480-619 42-185 (198)
394 3g39_A Variable lymphocyte rec 99.5 1.7E-14 6E-19 140.6 9.7 108 513-623 12-119 (170)
395 4fs7_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 150.5 21.9 237 310-587 157-393 (394)
396 4fs7_A Uncharacterized protein 99.5 7.8E-13 2.7E-17 147.8 21.2 327 234-611 65-393 (394)
397 2r9u_A Variable lymphocyte rec 99.5 4.8E-14 1.6E-18 137.9 9.8 107 514-623 16-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 3E-13 1E-17 131.7 11.0 108 488-598 11-118 (170)
399 2r9u_A Variable lymphocyte rec 99.4 5.3E-13 1.8E-17 130.4 10.5 105 489-596 15-119 (174)
400 3tm0_A Aminoglycoside 3'-phosp 99.3 2.9E-12 9.9E-17 134.6 11.5 144 725-875 13-213 (263)
401 2ifg_A High affinity nerve gro 99.3 9.8E-13 3.3E-17 144.4 7.0 132 490-624 12-146 (347)
402 2ifg_A High affinity nerve gro 99.3 4.8E-12 1.6E-16 138.9 11.1 107 514-623 12-120 (347)
403 4gt6_A Cell surface protein; l 99.3 2.4E-10 8.3E-15 127.5 22.7 328 235-618 58-390 (394)
404 3un9_A NLR family member X1; l 99.3 1.8E-13 6.2E-18 150.9 -3.5 158 463-620 73-253 (372)
405 3un9_A NLR family member X1; l 99.2 1.2E-13 4.1E-18 152.3 -5.7 110 510-619 155-283 (372)
406 4gt6_A Cell surface protein; l 99.2 5.1E-10 1.7E-14 124.9 22.1 307 234-594 81-390 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 125.6 8.3 139 726-876 20-215 (264)
408 3dxp_A Putative acyl-COA dehyd 99.0 1.2E-09 4E-14 120.3 11.1 142 730-875 42-248 (359)
409 2ra8_A Uncharacterized protein 99.0 2.1E-10 7.2E-15 125.2 4.0 13 92-104 107-119 (362)
410 3rw6_A Nuclear RNA export fact 98.9 1.3E-11 4.4E-16 127.7 -6.6 162 31-203 77-257 (267)
411 4h09_A Hypothetical leucine ri 98.9 4E-08 1.4E-12 108.9 20.6 112 477-591 231-342 (379)
412 4h09_A Hypothetical leucine ri 98.9 6.2E-08 2.1E-12 107.3 20.5 302 287-616 42-343 (379)
413 2ra8_A Uncharacterized protein 98.8 3.4E-09 1.1E-13 115.6 6.6 34 239-272 192-227 (362)
414 3r70_A Aminoglycoside phosphot 98.6 7.3E-08 2.5E-12 104.0 10.2 137 727-876 38-238 (320)
415 1io0_A Tropomodulin; LRR prote 98.6 3E-09 1E-13 104.7 -1.7 127 55-210 23-164 (185)
416 3rw6_A Nuclear RNA export fact 98.5 2.4E-08 8.1E-13 103.2 2.5 41 171-211 168-210 (267)
417 3sg8_A APH(2'')-ID; antibiotic 98.5 1.4E-07 4.9E-12 100.9 8.7 137 731-876 25-224 (304)
418 3tdw_A Gentamicin resistance p 98.4 1.2E-06 4E-11 93.7 12.8 137 731-876 24-225 (306)
419 3d1u_A Putative fructosamine-3 98.4 1E-06 3.5E-11 92.9 12.1 77 729-809 18-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.5E-11 90.9 13.0 136 733-876 31-224 (272)
421 1io0_A Tropomodulin; LRR prote 98.3 7.9E-08 2.7E-12 94.5 0.4 114 481-594 31-163 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.4E-06 4.9E-11 95.2 9.5 76 729-810 44-122 (362)
423 3ats_A Putative uncharacterize 98.3 1.2E-06 3.9E-11 96.1 8.4 80 731-810 25-121 (357)
424 2q83_A YTAA protein; 2635576, 98.0 2E-05 6.8E-10 85.6 11.6 139 732-875 38-252 (346)
425 2olc_A MTR kinase, methylthior 98.0 2.1E-05 7.1E-10 87.4 10.5 75 731-807 35-120 (397)
426 3jr1_A Putative fructosamine-3 97.8 0.00012 4.2E-09 77.7 12.3 137 730-871 40-232 (312)
427 3f7w_A Putative fructosamine-3 97.7 0.00015 5.3E-09 76.4 12.1 80 726-809 15-97 (288)
428 2pyw_A Uncharacterized protein 97.6 0.00019 6.4E-09 80.2 10.1 73 731-806 39-122 (420)
429 3e4g_A ATP synthase subunit S, 97.5 1.8E-05 6.2E-10 75.6 1.1 83 510-592 61-149 (176)
430 2ppq_A HSK, HK, homoserine kin 97.5 0.00026 8.9E-09 75.9 10.4 156 717-875 8-217 (322)
431 3e4g_A ATP synthase subunit S, 97.4 3.6E-05 1.2E-09 73.5 1.5 82 487-568 62-149 (176)
432 3csv_A Aminoglycoside phosphot 97.4 0.00048 1.6E-08 74.3 10.2 140 732-876 24-218 (333)
433 3dxq_A Choline/ethanolamine ki 97.3 0.00052 1.8E-08 72.8 9.7 137 731-876 23-203 (301)
434 1zyl_A Hypothetical protein YI 97.2 0.00094 3.2E-08 71.7 10.4 140 732-875 32-223 (328)
435 3feg_A Choline/ethanolamine ki 97.2 0.00098 3.4E-08 72.7 10.1 140 731-875 55-254 (379)
436 3rfe_A Platelet glycoprotein I 97.0 0.00064 2.2E-08 61.8 5.7 61 561-623 11-72 (130)
437 3i1a_A Spectinomycin phosphotr 97.0 0.0043 1.5E-07 66.9 12.8 67 736-809 33-108 (339)
438 1nw1_A Choline kinase (49.2 KD 97.0 0.0015 5.3E-08 72.7 9.0 73 731-809 78-159 (429)
439 2qg7_A Ethanolamine kinase PV0 96.9 0.003 1E-07 70.8 10.3 74 731-809 113-188 (458)
440 1pgv_A TMD-1, tropomodulin TMD 96.9 0.0003 1E-08 68.5 1.8 85 484-568 39-136 (197)
441 3c5i_A Choline kinase; choline 96.8 0.0023 8E-08 69.9 9.2 74 731-809 38-121 (369)
442 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00026 8.9E-09 68.9 0.2 17 438-454 67-83 (197)
443 3rfe_A Platelet glycoprotein I 96.6 0.0029 9.8E-08 57.4 6.4 35 488-522 33-67 (130)
444 3f2s_A CK, chetk-alpha, cholin 96.4 0.011 3.8E-07 64.5 10.3 141 731-875 57-280 (401)
445 3mes_A Choline kinase; malaria 95.6 0.044 1.5E-06 60.4 10.8 74 731-809 75-157 (424)
446 3g15_A CK, chetk-alpha, cholin 93.9 0.15 5.1E-06 56.0 9.3 30 846-875 245-280 (401)
447 2jwa_A Receptor tyrosine-prote 74.6 1.2 4.1E-05 30.9 1.4 6 668-673 15-20 (44)
448 4ano_A ESSB; membrane protein, 73.1 7.1 0.00024 38.1 7.1 86 780-876 48-134 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 69.3 0.61 2.1E-05 52.1 -1.6 60 729-791 145-213 (463)
450 4ann_A ESSB; membrane protein, 68.2 6.5 0.00022 38.2 5.6 87 780-877 43-130 (215)
451 2ks1_B Epidermal growth factor 66.8 3.2 0.00011 28.9 2.2 28 668-695 15-42 (44)
452 2l2t_A Receptor tyrosine-prote 66.7 3.6 0.00012 28.5 2.4 29 668-696 14-42 (44)
453 2k1k_A Ephrin type-A receptor 57.9 6.7 0.00023 26.3 2.4 16 666-681 12-27 (38)
454 2x6h_A GH13170P, VPS34, phosph 55.9 1.2E+02 0.0041 35.1 14.0 44 824-874 530-575 (696)
455 2k9y_A Ephrin type-A receptor 55.6 6.8 0.00023 26.7 2.3 13 670-682 15-27 (41)
456 3ls8_A Phosphatidylinositol 3- 53.7 1.5E+02 0.005 33.7 14.0 82 785-874 402-501 (614)
457 3hhm_A Phosphatidylinositol-4, 44.5 91 0.0031 38.0 11.0 25 850-874 937-961 (1091)
458 2jwa_A Receptor tyrosine-prote 43.9 11 0.00039 26.1 1.8 27 669-695 13-39 (44)
459 2lz0_A Uncharacterized protein 38.5 36 0.0012 28.4 4.7 46 473-519 7-52 (100)
460 2klu_A T-cell surface glycopro 37.2 27 0.00091 26.3 3.0 36 670-705 12-49 (70)
461 1cja_A Protein (actin-fragmin 35.2 57 0.0019 33.9 6.3 140 728-876 71-238 (342)
462 2lz0_A Uncharacterized protein 31.6 80 0.0027 26.2 5.7 47 496-543 6-52 (100)
463 2yle_A Protein spire homolog 1 30.3 64 0.0022 31.4 5.4 60 808-869 34-93 (229)
464 3eps_A Isocitrate dehydrogenas 20.8 8.8E+02 0.03 26.8 12.7 147 718-877 302-483 (578)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-88 Score=829.85 Aligned_cols=621 Identities=32% Similarity=0.498 Sum_probs=487.6
Q ss_pred CCCCChhHHHHHHHHHhcccc----CCCCCCCCceeeeeEEeeCCCCcEEEEEeccCCccee---cC-------------
Q 046199 2 ANNINTTDQQALLALKARITA----KNWTSNTSVCSWIGITCDVSTHRVTALNISDFGLTGT---IS------------- 61 (902)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~~----~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~------------- 61 (902)
++...++|++||++||+++++ ++|..++|||+|.||+|+ ++||+.|||+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 344468899999999999975 689888899999999999 68999999999999987 55
Q ss_pred ----------cccCCCCCCCeeeccccccccCCCc--cccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcc
Q 046199 62 ----------SQLGNLSSLQTLDLSHNRFSGTIPS--SIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSL 129 (902)
Q Consensus 62 ----------~~l~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l 129 (902)
+.++.+++|++|||++|+++|.+|. .++++++|++|+|++|.+++.+|....+++++|++||+++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 4677888999999999999988888 8899999999999999999888887778888999999999988
Q ss_pred cCcCCcc------------------hhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCCh
Q 046199 130 SGELPAN------------------IFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPS 191 (902)
Q Consensus 130 ~~~~~~~------------------~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 191 (902)
++..+.. .+...+ .++.+++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|.
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCC-BCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccC-CcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 8653321 011110 113444555555555555544444 55555555555555555555555
Q ss_pred hhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCC-CCCceEe
Q 046199 192 SIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNM-STLKALS 270 (902)
Q Consensus 192 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 270 (902)
.++++++|++|+|++|. ++|.+| .. .+++|++|+|++|++++.+|..+..+ ++|++|+
T Consensus 242 ~l~~l~~L~~L~Ls~n~----------l~~~~~---------~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~ 300 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQ----------FVGPIP---------PL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 300 (768)
T ss_dssp HTTTCSSCCEEECCSSC----------CEESCC---------CC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEE
T ss_pred HHhcCCCCCEEECCCCc----------ccCccC---------cc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEE
Confidence 55555555555555554 334443 22 56677777777777776677666654 7777777
Q ss_pred ccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcc-ccccccccEEEccCCcccCcccccccccc-cccEEeccc
Q 046199 271 LLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGF-IFNASKLFLLELTGNSFSGFIPDTLVNLR-NLEHLGLGY 348 (902)
Q Consensus 271 Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~ 348 (902)
|++|++++.+|.. +..+++|++|++++|.+++.+|.. +..+++|++|++++|++++.+|..+..++ +|++|++++
T Consensus 301 Ls~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~ 377 (768)
T 3rgz_A 301 LSGNHFYGAVPPF---FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377 (768)
T ss_dssp CCSSEEEECCCGG---GGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCS
T ss_pred CcCCcCCCccchH---HhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccC
Confidence 7777777666665 566677777777777776666654 66777777777777777766777776665 777777777
Q ss_pred ccCCCCCCcccccccccC--CCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeec
Q 046199 349 NYLTSSTPELSFLSSLAN--SSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGN 426 (902)
Q Consensus 349 N~l~~~~~~~~~l~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 426 (902)
|++++..| ..+.. +++|++|++++|.+.+.+|..+..++ +|++|++++|++++.+|..|..+++|++|++++
T Consensus 378 N~l~~~~~-----~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 378 NNFSGPIL-----PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp SEEEEECC-----TTTTCSTTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CCcCCCcC-----hhhhhcccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 77766554 33444 67788888888888888888888887 888888888888888888888888888888888
Q ss_pred ceecccCCcccccccccCeeecccccccCCCCCcCC---CCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccc
Q 046199 427 NQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLC---QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIP 503 (902)
Q Consensus 427 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 503 (902)
|++++.+|..+..+++|++|++++|++++.+|..+. +|++|++++|++++.+|..|+++++|++|++++|++++.+|
T Consensus 452 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 888888888888888888888888888888886654 78888888888888888888888888888888888888888
Q ss_pred ccccCCCCceEEEcCCCccCCCCcccc-----------------------------------------------------
Q 046199 504 STFWNLNNILSFDFSSNSLNGSLPLDI----------------------------------------------------- 530 (902)
Q Consensus 504 ~~~~~l~~L~~L~ls~N~l~~~~~~~~----------------------------------------------------- 530 (902)
..++.+++|++|++++|+++|.+|..+
T Consensus 532 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 611 (768)
T 3rgz_A 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTC
T ss_pred HHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 888888888888888888887766543
Q ss_pred -----------------ccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCcc
Q 046199 531 -----------------GNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNN 593 (902)
Q Consensus 531 -----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 593 (902)
+.+++|+.|||++|+++|.+|.+|+++++|+.|+|++|+++|.+|..|+.+++|++|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 345778999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCCCCCCCCCCCCCCC
Q 046199 594 LSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSPHLQVPLCKSSPHQ 659 (902)
Q Consensus 594 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~c~~~~~~ 659 (902)
++|.+|..+..+++|++||+++|+++|.||.+++|+++...+|.|||++||.|+. .|......
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~---~C~~~~~~ 754 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP---RCDPSNAD 754 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC---CCCSCC--
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc---CCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999874 68655433
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-71 Score=675.74 Aligned_cols=547 Identities=33% Similarity=0.490 Sum_probs=454.1
Q ss_pred CcEEEEEeccCCcceecCc--ccCCCCCCCeeeccccccccCCCccc-cCCCcceEEEecCccccCCCCccc--ccCCCc
Q 046199 44 HRVTALNISDFGLTGTISS--QLGNLSSLQTLDLSHNRFSGTIPSSI-FSISTLKILILGDNQLSGSFPSFI--ISNTSS 118 (902)
Q Consensus 44 ~~v~~l~l~~~~l~g~~~~--~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~ls~n~l~~~~~~~~--~~~~~~ 118 (902)
.+++.|||++|.++|.+|. .++.+++|++|||++|++++.+|..+ +++++|++|||++|++++..|..+ ++++++
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4689999999999999998 99999999999999999999998876 789999999999999998776543 567777
Q ss_pred ccEEEcccCcccCcCCc-------------chhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcC
Q 046199 119 LRAIDCNYNSLSGELPA-------------NIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFL 185 (902)
Q Consensus 119 L~~ldls~n~l~~~~~~-------------~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (902)
|++|++++|.+++..+. |.+...++.++++++|++|+|++|++++.+|..++.+++|++|+|++|++
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 259 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCC
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcc
Confidence 77777777777764432 23333333499999999999999999999999999999999999999999
Q ss_pred CCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCC-CCCCEEEccCccccCcCCCcccCCC
Q 046199 186 TGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNL-PNLEVLGIDENHLVGDVPNTIFNMS 264 (902)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~ 264 (902)
++.+|.. .+++|++|+|++|.+ +|.+| ..+..+ ++|++|+|++|++++.+|..+++++
T Consensus 260 ~~~~~~~--~l~~L~~L~L~~n~l----------~~~ip---------~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 260 VGPIPPL--PLKSLQYLSLAENKF----------TGEIP---------DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp EESCCCC--CCTTCCEEECCSSEE----------EESCC---------CCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred cCccCcc--ccCCCCEEECcCCcc----------CCccC---------HHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 9988875 899999999999984 44454 555554 7888888888888888888888888
Q ss_pred CCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccc-cccEEEccCCcccCcccccccc--cccc
Q 046199 265 TLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNAS-KLFLLELTGNSFSGFIPDTLVN--LRNL 341 (902)
Q Consensus 265 ~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~--l~~L 341 (902)
+|++|+|++|+++|.+|... +..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+.. +++|
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~--l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 396 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDT--LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396 (768)
T ss_dssp TCCEEECCSSEEEEECCHHH--HTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCC
T ss_pred CccEEECCCCcccCcCCHHH--HhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCc
Confidence 88888888888887777542 56778888888888888877887777776 7888888888887777777766 7778
Q ss_pred cEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcE
Q 046199 342 EHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTT 421 (902)
Q Consensus 342 ~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 421 (902)
++|++++|++++..| ..+.++++|++|++++|++.+.+|..+..++ +|+.|++++|.+++.+|..+..+++|++
T Consensus 397 ~~L~L~~n~l~~~~p-----~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 397 QELYLQNNGFTGKIP-----PTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp CEEECCSSEEEEECC-----GGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cEEECCCCccccccC-----HHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 888888888877666 6677778888888888888877787777777 7888888888888778888888888888
Q ss_pred EEeecceecccCCcccccccccCeeecccccccCCCCCcCC---CCCeEeccCccccCCCCccccCCCcCceEecCCCCc
Q 046199 422 LHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLC---QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNEL 498 (902)
Q Consensus 422 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 498 (902)
|++++|++++.+|.++..+++|++|++++|++++.+|.++. +|++|++++|++++.+|..+.++++|+.|++++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 88888888877788888888888888888888877776543 777888888888877888888888888888888877
Q ss_pred cCccccc----------------------------------------------------------------------ccC
Q 046199 499 SSFIPST----------------------------------------------------------------------FWN 508 (902)
Q Consensus 499 ~~~~~~~----------------------------------------------------------------------~~~ 508 (902)
++.+|.. |..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 7666543 444
Q ss_pred CCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEe
Q 046199 509 LNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLD 588 (902)
Q Consensus 509 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 588 (902)
+++|++||+++|+++|.+|..+++++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..|+.+++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCccccccCCcccccccccccccccCCccee
Q 046199 589 LSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 589 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
|++|+++|.+|.. ..+..+....+.+|+--|
T Consensus 711 ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 711 LSNNNLSGPIPEM-GQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp CCSSEEEEECCSS-SSGGGSCGGGGCSCTEEE
T ss_pred CcCCcccccCCCc-hhhccCCHHHhcCCchhc
Confidence 9999999999965 456667778888997444
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-62 Score=593.57 Aligned_cols=544 Identities=21% Similarity=0.226 Sum_probs=348.8
Q ss_pred CcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEE
Q 046199 44 HRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAID 123 (902)
Q Consensus 44 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ld 123 (902)
.+++.|+|+++.+++..+..++.+++|++|||++|++++..|..++++++|++|+|++|.++ .+|...++++++|++||
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEE
Confidence 46999999999999877778999999999999999999888989999999999999999999 46776678999999999
Q ss_pred cccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhh--ccCcccE
Q 046199 124 CNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIF--NLSSLLE 201 (902)
Q Consensus 124 ls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~ 201 (902)
+++|++++. .|..++++++|++|+|++|++++..|..++.+++|++|++++|.+++..|..+. .+++|++
T Consensus 104 L~~n~l~~~--------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 104 LMSNSIQKI--------KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CCSSCCCCC--------CSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCccCcc--------ChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 999999742 346789999999999999999988899999999999999999999977777665 4589999
Q ss_pred EeeeeCCCCccccccccccCCccccccccCCCccccCC---------------------------CCCCEEEccCccccC
Q 046199 202 LDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNL---------------------------PNLEVLGIDENHLVG 254 (902)
Q Consensus 202 L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l---------------------------~~L~~L~Ls~N~l~~ 254 (902)
|++++|.++.+ . |..+..+ ++|+.|++++|++++
T Consensus 176 L~L~~n~l~~~----------~---------~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~ 236 (680)
T 1ziw_A 176 LELSSNQIKEF----------S---------PGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST 236 (680)
T ss_dssp EECTTCCCCCB----------C---------TTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCE
T ss_pred EECCCCccccc----------C---------hhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccc
Confidence 99999986642 1 2334444 445555555555555
Q ss_pred cCCCcccCCCC--CceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccC---
Q 046199 255 DVPNTIFNMST--LKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSG--- 329 (902)
Q Consensus 255 ~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~--- 329 (902)
..|..+..++. |+.|+|++|++++..|.. +..+++|++|++++|++.+..|..+..+++|++|++++|...+
T Consensus 237 ~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~ 313 (680)
T 1ziw_A 237 TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDS---FAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313 (680)
T ss_dssp ECTTTTGGGGGSCCCEEECTTSCCCEECTTT---TTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC---
T ss_pred cChhHhhccCcCCCCEEECCCCCcCccCccc---ccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccc
Confidence 55555555543 666666666555444443 4455556666666666555555555555566666665554332
Q ss_pred --cccc----cccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcc--cCccccccc-ccccEEEe
Q 046199 330 --FIPD----TLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGV--LPSSIGNLP-ITLEEIYL 400 (902)
Q Consensus 330 --~~p~----~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~-~~L~~L~L 400 (902)
.+|. .|..+++|++|++++|++++..+ ..+.++++|++|++++|.+... .+..+..+. .+|+.|++
T Consensus 314 ~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L 388 (680)
T 1ziw_A 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS-----NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNL 388 (680)
T ss_dssp ---CCEECTTTTTTCTTCCEEECCSCCBCCCCT-----TTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEEC
T ss_pred cccccccChhhcccCCCCCEEECCCCccCCCCh-----hHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEEC
Confidence 1111 44555556666666665555544 4455555566666655553321 111122111 14555666
Q ss_pred ecCcccccCCcccCCCCCCcEEEeecceecccCC-cccccccccCeeecccccccCCCCCcC---CCCCeEeccCcccc-
Q 046199 401 QNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIP-ITVGRLNTLQGLGLENNKLEGPIPDDL---CQLSELHVDHNKLS- 475 (902)
Q Consensus 401 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~L~~N~l~- 475 (902)
++|++++..|.+|..+++|++|++++|++++.+| ..|..+++|++|++++|++.+..+..+ .+|+.|++++|.++
T Consensus 389 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 468 (680)
T 1ziw_A 389 TKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 468 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBC
T ss_pred CCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccc
Confidence 6666655555555556666666666666554443 455555666666666665554433332 25556666665554
Q ss_pred -CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCc--------cccccccccceeccCCccc
Q 046199 476 -GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLP--------LDIGNMKVVVEINLSRNYL 546 (902)
Q Consensus 476 -~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l 546 (902)
+..|..|.++++|+.|++++|+++++.+..|.++++|++|++++|++++..+ ..|.++++|++|+|++|++
T Consensus 469 ~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 548 (680)
T 1ziw_A 469 VDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF 548 (680)
T ss_dssp TTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCC
T ss_pred cccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCC
Confidence 3455555556666666666666655555555556666666666665553211 1245555566666666666
Q ss_pred cccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccc-cccccccccccCCcceecCC
Q 046199 547 TGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLE-KLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 547 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~l~~N~l~~~~p 623 (902)
+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+. .+++|+.|++++|+|.|.++
T Consensus 549 ~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 549 DEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 533334455566666666666666554445555556666666666666655554454 45556666666666655554
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-61 Score=587.13 Aligned_cols=563 Identities=23% Similarity=0.258 Sum_probs=483.1
Q ss_pred EEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccC
Q 046199 48 ALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYN 127 (902)
Q Consensus 48 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n 127 (902)
.+|.++++++ .+|..+. +++++|||++|++++..|..|+++++|++|+|++|.+++..|. .++++++|++||+++|
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHN 83 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTT-HHHHCTTCCEEECCSS
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHH-HHhcccCcCEEECCCC
Confidence 4667777776 6887665 7999999999999966666799999999999999999976554 4688999999999999
Q ss_pred cccCcCCcchhccCcc-cccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeee
Q 046199 128 SLSGELPANIFRAIPK-DIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSN 206 (902)
Q Consensus 128 ~l~~~~~~~~~~~ip~-~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 206 (902)
.+++ +|. .|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++
T Consensus 84 ~l~~---------l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 154 (680)
T 1ziw_A 84 ELSQ---------LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 154 (680)
T ss_dssp CCCC---------CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCS
T ss_pred ccCc---------cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccC
Confidence 9974 665 589999999999999999976778999999999999999999998899999999999999999
Q ss_pred CCCCccccccccccCCccccccccCCCccc--cCCCCCCEEEccCccccCcCCCcccCC---------------------
Q 046199 207 NSLTGFYMTNNHFTGSIPRNLWQCEIPHEI--GNLPNLEVLGIDENHLVGDVPNTIFNM--------------------- 263 (902)
Q Consensus 207 N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l--~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------------------- 263 (902)
|.++.+ .| ..+ ..+++|+.|++++|++++..|..+..+
T Consensus 155 n~l~~~----------~~---------~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~ 215 (680)
T 1ziw_A 155 NKIQAL----------KS---------EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKL 215 (680)
T ss_dssp SCCCCB----------CH---------HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHH
T ss_pred Cccccc----------CH---------HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHH
Confidence 996632 11 333 356899999999999998888877655
Q ss_pred ------CCCceEeccCcccccCCCcCCcccCCCcc--cceeeccCccCCCCCCccccccccccEEEccCCcccCcccccc
Q 046199 264 ------STLKALSLLNNTLSGSLPSSSKNLIGLPN--IERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTL 335 (902)
Q Consensus 264 ------~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~--L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l 335 (902)
++|+.|++++|.+++..|.. +..++. |++|++++|++++..|..+..+++|++|++++|++.+..|..|
T Consensus 216 ~~~l~~~~L~~L~L~~n~l~~~~~~~---~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (680)
T 1ziw_A 216 CLELANTSIRNLSLSNSQLSTTSNTT---FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292 (680)
T ss_dssp HHHHTTSCCCEEECTTSCCCEECTTT---TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTT
T ss_pred HHHhhhccccEEEccCCcccccChhH---hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhh
Confidence 45777888888888777766 555544 9999999999998888889999999999999999998888899
Q ss_pred cccccccEEecccccCCCCC-----CcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCccc--cc
Q 046199 336 VNLRNLEHLGLGYNYLTSST-----PELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIR--GN 408 (902)
Q Consensus 336 ~~l~~L~~L~Ls~N~l~~~~-----~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~--~~ 408 (902)
..+++|++|++++|...+.. |.+.. ..+..+++|++|++++|.+.+..|..+..++ +|++|++++|.+. ..
T Consensus 293 ~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l 370 (680)
T 1ziw_A 293 HGLFNVRYLNLKRSFTKQSISLASLPKIDD-FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTL 370 (680)
T ss_dssp TTCTTCCEEECTTCBCCC------CCEECT-TTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEE
T ss_pred cCCCCccEEeccchhhhcccccccccccCh-hhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhc
Confidence 99999999999987665422 11100 2577899999999999999998888899998 9999999999854 33
Q ss_pred CCcccCCC--CCCcEEEeecceecccCCcccccccccCeeecccccccCCCCC----cCCCCCeEeccCccccCCCCccc
Q 046199 409 IPKEIGNL--VNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPD----DLCQLSELHVDHNKLSGPIPACF 482 (902)
Q Consensus 409 ~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~L~~L~L~~N~l~~~~p~~~ 482 (902)
.+..|..+ ++|+.|++++|++++..|.+|..+++|++|++++|++.+.+|. .+.+|++|++++|++.+..+..|
T Consensus 371 ~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 450 (680)
T 1ziw_A 371 TNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSF 450 (680)
T ss_dssp CTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTT
T ss_pred chhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhh
Confidence 34445443 5899999999999999999999999999999999999876663 34589999999999999999999
Q ss_pred cCCCcCceEecCCCCcc--CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCc--------c
Q 046199 483 GNLNSLRNLSLGSNELS--SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIP--------T 552 (902)
Q Consensus 483 ~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~ 552 (902)
..+++|+.|++++|.+. +..|..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+ .
T Consensus 451 ~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 530 (680)
T 1ziw_A 451 ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIY 530 (680)
T ss_dssp TTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCC
T ss_pred hcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcch
Confidence 99999999999999987 5688999999999999999999999888889999999999999999996532 3
Q ss_pred ccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCC--cccc
Q 046199 553 TIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGG--SFAN 630 (902)
Q Consensus 553 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~--~~~~ 630 (902)
.|.++++|+.|+|++|+++...+..|..+++|+.|||++|++++..+..|..+++|+.|+|++|++++..|... .+..
T Consensus 531 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 610 (680)
T 1ziw_A 531 FLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRN 610 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTT
T ss_pred hhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccc
Confidence 48899999999999999996556689999999999999999998777788999999999999999998776532 4677
Q ss_pred cccccccCCcccCCCCC
Q 046199 631 FSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 631 ~~~~~~~~n~~lc~~~~ 647 (902)
+....+.+||+.|.++.
T Consensus 611 L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 611 LTELDMRFNPFDCTCES 627 (680)
T ss_dssp CSEEECTTCCCCBCCCC
T ss_pred cCEEEccCCCcccCCcc
Confidence 88889999999999875
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3e-60 Score=585.87 Aligned_cols=529 Identities=23% Similarity=0.213 Sum_probs=431.6
Q ss_pred EEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccC
Q 046199 48 ALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYN 127 (902)
Q Consensus 48 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n 127 (902)
..|.++++++ .+|. ..++|++||||+|++++..|..|.++++|++|+|++|.+.+.++...++++++|++|||++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3455566666 4565 44678888888888876667778888888888888887777776666778888888888888
Q ss_pred cccCcCCcchhccCcccccCcCccceeeecccccCCCCchh--hccccccceeecccCcCCCCCC-hhhhccCcccEEee
Q 046199 128 SLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQE--LGNLAELEWLSLPRSFLTGTIP-SSIFNLSSLLELDF 204 (902)
Q Consensus 128 ~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L 204 (902)
.+++. .|..++++++|++|+|++|.+++.+|.. ++.+++|++|+|++|.+++..| ..|+++++|++|+|
T Consensus 84 ~l~~~--------~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~L 155 (844)
T 3j0a_A 84 KIYFL--------HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDF 155 (844)
T ss_dssp CCCEE--------CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEE
T ss_pred cCccc--------CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEEC
Confidence 77643 5777888888888888888888766665 7788888888888888876544 56788888888888
Q ss_pred eeCCCCccccccccccCCccccccccCCCccccCC--CCCCEEEccCccccCcCCCcccCCCC------CceEeccCccc
Q 046199 205 SNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNL--PNLEVLGIDENHLVGDVPNTIFNMST------LKALSLLNNTL 276 (902)
Q Consensus 205 s~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l 276 (902)
++|.++. .. |..++.+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+
T Consensus 156 s~N~i~~----------~~---------~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 216 (844)
T 3j0a_A 156 SSNQIFL----------VC---------EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGW 216 (844)
T ss_dssp ESSCCCC----------CC---------SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCS
T ss_pred CCCcCCe----------eC---------HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcC
Confidence 8887542 22 3566666 77888888888888777777666655 88888888888
Q ss_pred ccCCCcCCcccCCCcccceeeccC---------ccCCCCCCcccccc--ccccEEEccCCcccCcccccccccccccEEe
Q 046199 277 SGSLPSSSKNLIGLPNIERLNLGL---------NNLSGRIPGFIFNA--SKLFLLELTGNSFSGFIPDTLVNLRNLEHLG 345 (902)
Q Consensus 277 ~~~~p~~~~~l~~l~~L~~L~Ls~---------N~l~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 345 (902)
++.+|..+.......+++.|.++. +.+.+..+..|..+ ++|+.|+|++|.+.+..|..|..+++|+.|+
T Consensus 217 ~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 296 (844)
T 3j0a_A 217 TVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLN 296 (844)
T ss_dssp STTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEE
T ss_pred chhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEE
Confidence 877776654444456677777663 33433444445443 6899999999999988889999999999999
Q ss_pred cccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEee
Q 046199 346 LGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLG 425 (902)
Q Consensus 346 Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 425 (902)
|++|++++..+ ..+..+++|++|++++|.+.+..|..+..++ +|+.|++++|++++..+..|..+++|++|+|+
T Consensus 297 L~~n~i~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 297 LAYNKINKIAD-----EAFYGLDNLQVLNLSYNLLGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp EESCCCCEECT-----TTTTTCSSCCEEEEESCCCSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCCcCCCCCh-----HHhcCCCCCCEEECCCCCCCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 99999998777 6788899999999999999988899999998 99999999999998888899999999999999
Q ss_pred cceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCC-ccccCCCcCceEecCCCCccCcccc
Q 046199 426 NNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIP-ACFGNLNSLRNLSLGSNELSSFIPS 504 (902)
Q Consensus 426 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~ 504 (902)
+|.+++. + .+++|+.|++++|+++ .+|....+++.|++++|++++... ..+.++++|+.|+|++|++++..+.
T Consensus 371 ~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 444 (844)
T 3j0a_A 371 DNALTTI-H----FIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGD 444 (844)
T ss_dssp TCCSCCC-S----SCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSS
T ss_pred CCCCCcc-c----CCCCcchhccCCCCcc-cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccc
Confidence 9999843 2 3789999999999998 778777899999999999997533 2456899999999999999986554
Q ss_pred -cccCCCCceEEEcCCCccC-----CCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccc
Q 046199 505 -TFWNLNNILSFDFSSNSLN-----GSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESF 578 (902)
Q Consensus 505 -~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 578 (902)
.+..+++|+.|++++|.++ +..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+
T Consensus 445 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 524 (844)
T 3j0a_A 445 QTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL 524 (844)
T ss_dssp SSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC
T ss_pred cccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh
Confidence 5667899999999999997 4455678899999999999999999999999999999999999999998877777
Q ss_pred cccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 579 GALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 579 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
. ++|+.|||++|+|++.+|..+. +|+.|++++|++.|.++.
T Consensus 525 ~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 525 P--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECEL 565 (844)
T ss_dssp C--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSSC
T ss_pred h--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCccccccc
Confidence 6 8999999999999999997764 788999999999998885
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.3e-61 Score=572.50 Aligned_cols=504 Identities=20% Similarity=0.279 Sum_probs=309.3
Q ss_pred ChhHHHHHHHHHhcccc-------------CCCCCCCCceee---eeEEeeCCCCcEEEEEeccCCcceecCcccCCCCC
Q 046199 6 NTTDQQALLALKARITA-------------KNWTSNTSVCSW---IGITCDVSTHRVTALNISDFGLTGTISSQLGNLSS 69 (902)
Q Consensus 6 ~~~~~~~l~~~~~~~~~-------------~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~ 69 (902)
...|+.||.+||+++.. .+|+.++|||.| .||+|+.. +||+.|+|++++++|.+|+++++|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 35799999999999765 268878899999 99999865 79999999999999999999999999
Q ss_pred CCeeecccccc------cc------CCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcch
Q 046199 70 LQTLDLSHNRF------SG------TIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANI 137 (902)
Q Consensus 70 L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~ 137 (902)
|++|||++|.+ .| .+|+.. +..|+ +++++|.+.+.+|..+-..+..+..+++....+..
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~------ 177 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK------ 177 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC------
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc------
Confidence 99999999987 33 556544 67788 88888888887665543333333333333322211
Q ss_pred hccCcccccCcCccceeee--cccccCCCCchhhccccccceeecccCcCCCC-----------------CChhhh--cc
Q 046199 138 FRAIPKDIGNLTKLKELYL--GYNKLQGEIPQELGNLAELEWLSLPRSFLTGT-----------------IPSSIF--NL 196 (902)
Q Consensus 138 ~~~ip~~~~~l~~L~~L~L--~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l 196 (902)
.....++.+.+ .+|+++| +|+.++++++|++|+|++|.++|. +|..++ ++
T Consensus 178 --------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l 248 (636)
T 4eco_A 178 --------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNL 248 (636)
T ss_dssp --------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred --------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhccc
Confidence 01112233323 2466665 666666666666666666666654 555555 56
Q ss_pred CcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCcc-ccC-cCCCcccCC------CCCce
Q 046199 197 SSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENH-LVG-DVPNTIFNM------STLKA 268 (902)
Q Consensus 197 ~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~ 268 (902)
++|++|+|++|. +.|.+| +.++++++|++|+|++|+ +++ .+|..++++ ++|++
T Consensus 249 ~~L~~L~L~~n~----------l~~~~p---------~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 249 KDLTDVEVYNCP----------NLTKLP---------TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTCCEEEEECCT----------TCSSCC---------TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred CCCCEEEecCCc----------CCccCh---------HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 666666666555 233333 555556666666666665 555 555555554 55555
Q ss_pred EeccCcccccCCCc--CCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccccccc-ccEEe
Q 046199 269 LSLLNNTLSGSLPS--SSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRN-LEHLG 345 (902)
Q Consensus 269 L~Ls~N~l~~~~p~--~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~ 345 (902)
|+|++|+++ .+|. . +..+++|++|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|+
T Consensus 310 L~L~~n~l~-~ip~~~~---l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~ 383 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETS---LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLS 383 (636)
T ss_dssp EECCSSCCS-SCCCHHH---HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEE
T ss_pred EECCCCcCC-ccCchhh---hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEE
Confidence 555555555 4444 3 4445555555555555554555 4555555555555555555 44445555555 55555
Q ss_pred cccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccccc-ccccEEEeecCcccccCCcccC-------CCC
Q 046199 346 LGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLP-ITLEEIYLQNCKIRGNIPKEIG-------NLV 417 (902)
Q Consensus 346 Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~L~~N~l~~~~p~~~~-------~l~ 417 (902)
+++|+++ .+|..+.... .+|+.|++++|++++..|..|. .++
T Consensus 384 Ls~N~l~------------------------------~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~ 433 (636)
T 4eco_A 384 FAHNKLK------------------------------YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGI 433 (636)
T ss_dssp CCSSCCS------------------------------SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCC
T ss_pred ccCCcCc------------------------------ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCC
Confidence 5555554 3333333221 1566666666666666666666 666
Q ss_pred CCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCC
Q 046199 418 NLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNE 497 (902)
Q Consensus 418 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 497 (902)
+|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..... ..+..+.++++|+.|+|++|+
T Consensus 434 ~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~-------------~~~~~~~~l~~L~~L~Ls~N~ 499 (636)
T 4eco_A 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLK-------------DENENFKNTYLLTSIDLRFNK 499 (636)
T ss_dssp CEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSE-------------ETTEECTTGGGCCEEECCSSC
T ss_pred CCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhc-------------cccccccccCCccEEECcCCc
Confidence 7777777777777443344556777888888877777 44443210 001113344566777777777
Q ss_pred ccCccccccc--CCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcc
Q 046199 498 LSSFIPSTFW--NLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIP 575 (902)
Q Consensus 498 l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 575 (902)
++. +|..+. .+++|++|++++|++++ +|..+..+++|++|+|++|+ ++++|++.+.+|
T Consensus 500 l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p 559 (636)
T 4eco_A 500 LTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWP 559 (636)
T ss_dssp CCB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCC
T ss_pred CCc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccCh
Confidence 763 455554 66677777777777665 56666666666666665554 445555555555
Q ss_pred ccccccccCCeEeCcCccccccCCcccccccccccccccCCccee
Q 046199 576 ESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 576 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
..|+.+++|++|+|++|++ +.+|..+. ++|+.|++++|++.+
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred HHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 5555555555555555555 34555443 455566666665554
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.2e-59 Score=556.20 Aligned_cols=530 Identities=21% Similarity=0.232 Sum_probs=438.6
Q ss_pred EEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCc
Q 046199 49 LNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNS 128 (902)
Q Consensus 49 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~ 128 (902)
++.++.+++ .+|..+.. ++++|||++|++++..|..|+++++|++|+|++|++++..|. .++++++|++||+++|+
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHED-TFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTT-TTTTCTTCCEEECTTCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChh-hccCccccCeeeCCCCc
Confidence 455666666 67776654 789999999999977788999999999999999999875454 45789999999999998
Q ss_pred ccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCC
Q 046199 129 LSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNS 208 (902)
Q Consensus 129 l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 208 (902)
+++. .|..++++++|++|+|++|++++..|..++.+++|++|+|++|++++..+..+..+++|++|++++|.
T Consensus 93 l~~~--------~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 93 LIFM--------AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp CSEE--------CTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred cccc--------ChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 8753 57788999999999999999997667889999999999999999997443445559999999999998
Q ss_pred CCccccccccccCCccccccccCCCccccCCCCCC--EEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcc
Q 046199 209 LTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLE--VLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKN 286 (902)
Q Consensus 209 l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~--~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 286 (902)
++.+ .|..++.+++|+ .|++++|++++..|..+. ..+|+.|++++|... +..
T Consensus 165 l~~~-------------------~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~---~~~--- 218 (606)
T 3t6q_A 165 IHYL-------------------SKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNL---LVI--- 218 (606)
T ss_dssp CCEE-------------------CHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCH---HHH---
T ss_pred cccc-------------------ChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhH---HHH---
Confidence 6632 136788889998 899999999976666554 468999999988622 222
Q ss_pred cCCCcccceeeccCcc-----CCCCCCccccccc--cccEEEccCCcccCcccccccccccccEEecccccCCCCCCccc
Q 046199 287 LIGLPNIERLNLGLNN-----LSGRIPGFIFNAS--KLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELS 359 (902)
Q Consensus 287 l~~l~~L~~L~Ls~N~-----l~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 359 (902)
+..+.++....+..+. .....+..+..+. +|+.|++++|.+++..+..|..+++|++|++++|+++.. |
T Consensus 219 ~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~l-p--- 294 (606)
T 3t6q_A 219 FKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL-P--- 294 (606)
T ss_dssp HHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCC-C---
T ss_pred hhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCC-C---
Confidence 2222222222222111 1122233344433 789999999999988888899999999999999999854 3
Q ss_pred ccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCc-ccCCCCCCcEEEeecceecccC--Ccc
Q 046199 360 FLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPK-EIGNLVNLTTLHLGNNQLSGSI--PIT 436 (902)
Q Consensus 360 ~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~ 436 (902)
..+..+++|++|++++|.+.+..|..+..++ +|++|++++|.+.+.+|. .+..+++|++|++++|++++.. |..
T Consensus 295 --~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 371 (606)
T 3t6q_A 295 --SGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQ 371 (606)
T ss_dssp --SSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTT
T ss_pred --hhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchh
Confidence 4578889999999999999988888888888 899999999998866654 5889999999999999998766 778
Q ss_pred cccccccCeeecccccccCCCCCcC---CCCCeEeccCccccCCCCc-cccCCCcCceEecCCCCccCcccccccCCCCc
Q 046199 437 VGRLNTLQGLGLENNKLEGPIPDDL---CQLSELHVDHNKLSGPIPA-CFGNLNSLRNLSLGSNELSSFIPSTFWNLNNI 512 (902)
Q Consensus 437 ~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 512 (902)
+..+++|++|++++|++.+..|..+ .+|+.|++++|++++..|. .|.++++|+.|++++|++++..|..|..+++|
T Consensus 372 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 451 (606)
T 3t6q_A 372 LRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL 451 (606)
T ss_dssp TTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC
Confidence 9999999999999999987766654 4899999999999887665 48999999999999999999999999999999
Q ss_pred eEEEcCCCccCCC---CccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeC
Q 046199 513 LSFDFSSNSLNGS---LPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDL 589 (902)
Q Consensus 513 ~~L~ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 589 (902)
++|++++|++++. .+..+..+++|++|++++|++++..|..|+.+++|+.|+|++|++++..|..|..+++| .|+|
T Consensus 452 ~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L 530 (606)
T 3t6q_A 452 QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNL 530 (606)
T ss_dssp CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEEC
T ss_pred CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEEC
Confidence 9999999999863 33668899999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCccccccCCcccccccccccccccCCcceecCCC
Q 046199 590 SVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 590 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
++|++++.+|..+..+++|+.|++++|++.|.++.
T Consensus 531 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 531 ASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99999999899999999999999999999998885
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.4e-59 Score=562.16 Aligned_cols=530 Identities=20% Similarity=0.253 Sum_probs=280.2
Q ss_pred CCChhHHHHHHHHHhccccCCCCCCC-----Cc--eee------------eeEEeeCCCCcEEEEEeccCCcceecCccc
Q 046199 4 NINTTDQQALLALKARITAKNWTSNT-----SV--CSW------------IGITCDVSTHRVTALNISDFGLTGTISSQL 64 (902)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l 64 (902)
....+|++||++||+++.+.+|+.+. +| |.| .||+|+. .+||+.|+|++++++|.+|+++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~~l 343 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPDAI 343 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECGGG
T ss_pred ccchHHHHHHHHHHHHcCCCCCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCchHH
Confidence 34568999999999999888996543 55 999 9999987 6799999999999999999999
Q ss_pred CCCCCCCeeec-cccccccCCCccccCC----C-----cceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCC
Q 046199 65 GNLSSLQTLDL-SHNRFSGTIPSSIFSI----S-----TLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELP 134 (902)
Q Consensus 65 ~~l~~L~~L~L-s~n~l~~~~p~~~~~l----~-----~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~ 134 (902)
++|++|++||| ++|.++|..|...... + .++..++. .+....|. .++..+..-.+..+..
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~--~~l~~~~~---~~~s~l~~~~l~~~~~----- 413 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKK--MFLDYDQR---LNLSDLLQDAINRNPE----- 413 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHH--HHTCCCGG---GGSCHHHHHHHHTCTT-----
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhh--hhhccCcc---hhhhHHHHHHhhhCcc-----
Confidence 99999999999 9999998865432211 0 01100000 00000000 0000000000000000
Q ss_pred cchhccCcccccCcCccceeeecc--cccCCCCchhhccccccceeecccCcCCC-----------------CCChhhh-
Q 046199 135 ANIFRAIPKDIGNLTKLKELYLGY--NKLQGEIPQELGNLAELEWLSLPRSFLTG-----------------TIPSSIF- 194 (902)
Q Consensus 135 ~~~~~~ip~~~~~l~~L~~L~L~~--n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~~~- 194 (902)
..+........++.+.+.. |+++| +|..|+++++|++|+|++|+++| .+|..++
T Consensus 414 -----~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 414 -----MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487 (876)
T ss_dssp -----SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred -----ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhh
Confidence 0000001111222222222 44443 44444444444444444444443 2444444
Q ss_pred -ccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCcc-ccC-cCCCcccCCC-------
Q 046199 195 -NLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENH-LVG-DVPNTIFNMS------- 264 (902)
Q Consensus 195 -~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~------- 264 (902)
++++|++|+|++|. +.|.+| ..|+++++|+.|+|++|+ +++ .+|..+++++
T Consensus 488 ~~L~~L~~L~Ls~N~----------l~~~iP---------~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~ 548 (876)
T 4ecn_A 488 SNLKDLTDVELYNCP----------NMTQLP---------DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGP 548 (876)
T ss_dssp GGCTTCCEEEEESCT----------TCCSCC---------GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTT
T ss_pred ccCCCCCEEECcCCC----------CCccCh---------HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccC
Confidence 45555555555444 222222 444445555555555554 444 4444333333
Q ss_pred CCceEeccCcccccCCCc--CCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccccccc-c
Q 046199 265 TLKALSLLNNTLSGSLPS--SSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRN-L 341 (902)
Q Consensus 265 ~L~~L~Ls~N~l~~~~p~--~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L 341 (902)
+|+.|+|++|+++ .+|. . +.++++|++|+|++|+++ .+| .+..+++|+.|+|++|+++ .+|..+..+++ |
T Consensus 549 ~L~~L~Ls~N~L~-~ip~~~~---l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L 621 (876)
T 4ecn_A 549 KIQIFYMGYNNLE-EFPASAS---LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQV 621 (876)
T ss_dssp TCCEEECCSSCCC-BCCCHHH---HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTC
T ss_pred CccEEEeeCCcCC-ccCChhh---hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccC
Confidence 5555555555554 4443 3 444455555555555554 444 4455555555555555555 44445555555 5
Q ss_pred cEEecccccCCCCCCcccccccccCCC--CCceeeeccCCCCcccCccc---c--cccccccEEEeecCcccccCCcccC
Q 046199 342 EHLGLGYNYLTSSTPELSFLSSLANSS--SSKYIVLAENPLNGVLPSSI---G--NLPITLEEIYLQNCKIRGNIPKEIG 414 (902)
Q Consensus 342 ~~L~Ls~N~l~~~~~~~~~l~~l~~l~--~L~~L~Ls~N~l~~~~p~~~---~--~l~~~L~~L~L~~N~l~~~~p~~~~ 414 (902)
++|++++|+++. .| ..+..++ +|+.|++++|++.+.+|... . ..+ +|+.|+|++|+++...+..+.
T Consensus 622 ~~L~Ls~N~L~~-lp-----~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~-~L~~L~Ls~N~L~~lp~~~~~ 694 (876)
T 4ecn_A 622 EGLGFSHNKLKY-IP-----NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGI-NASTVTLSYNEIQKFPTELFA 694 (876)
T ss_dssp CEEECCSSCCCS-CC-----SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCC-CEEEEECCSSCCCSCCHHHHH
T ss_pred CEEECcCCCCCc-Cc-----hhhhccccCCCCEEECcCCcCCCccccchhhhccccCC-CcCEEEccCCcCCccCHHHHc
Confidence 555555555542 22 1122221 13333333333333222111 1 111 344444444444422222223
Q ss_pred CCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCcccc--CCCcCceEe
Q 046199 415 NLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFG--NLNSLRNLS 492 (902)
Q Consensus 415 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ 492 (902)
.+++|+.|+|++|+++ .+|..+..... .....+.+|+.|+|++|+++ .+|..+. .+++|+.|+
T Consensus 695 ~l~~L~~L~Ls~N~L~-~ip~~~~~~~~-------------~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 695 TGSPISTIILSNNLMT-SIPENSLKPKD-------------GNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp TTCCCSEEECCSCCCS-CCCTTSSSCTT-------------SCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEE
T ss_pred cCCCCCEEECCCCcCC-ccChHHhcccc-------------ccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEE
Confidence 4444444454444444 22222111000 00000114444555555554 3444444 566666666
Q ss_pred cCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCC
Q 046199 493 LGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHG 572 (902)
Q Consensus 493 L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 572 (902)
|++|+|++ +|..+..+++|+.|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +
T Consensus 760 Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~ 819 (876)
T 4ecn_A 760 VSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-R 819 (876)
T ss_dssp CCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-C
T ss_pred eCCCCCCc-cchhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-C
Confidence 66666665 45556666666666666654 4566888888888888888888888888888 5
Q ss_pred CccccccccccCCeEeCcCccccccCCcccccccccccccccCCccee
Q 046199 573 PIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 573 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|++..
T Consensus 820 ~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 820 KVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp BCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred ccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 7787765 588888888888887777777777777777788776653
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-57 Score=544.18 Aligned_cols=526 Identities=21% Similarity=0.205 Sum_probs=450.6
Q ss_pred EEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccC
Q 046199 48 ALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYN 127 (902)
Q Consensus 48 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n 127 (902)
.++.++++++ .+|..+. ++|++|||++|++++..|..|.++++|++|+|++|++++..|. .++++++|++||+++|
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~-~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDK-AWHGLHHLSNLILTGN 90 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHH-HhhchhhcCEeECCCC
Confidence 4677788887 6787665 7899999999999977777899999999999999999965444 4588999999999999
Q ss_pred cccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCC-CCChhhhccCcccEEeeee
Q 046199 128 SLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTG-TIPSSIFNLSSLLELDFSN 206 (902)
Q Consensus 128 ~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~ 206 (902)
++++. .|..|+++++|++|+|++|++++..|..++.+++|++|+|++|++++ .+|..|+++++|++|+|++
T Consensus 91 ~l~~~--------~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 91 PIQSF--------SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CCCCC--------CTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred ccccc--------ChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 99853 58889999999999999999997777889999999999999999986 6799999999999999999
Q ss_pred CCCCccccccccccCCccccccccCCCccccCCCCCC----EEEccCccccCcCCCcccCCCCCceEeccCccccc-CCC
Q 046199 207 NSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLE----VLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSG-SLP 281 (902)
Q Consensus 207 N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p 281 (902)
|.++.+ .|..++.+++|+ +|++++|++++..+..+.. .+|+.|++++|.+++ .+|
T Consensus 163 n~l~~~-------------------~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~ 222 (606)
T 3vq2_A 163 NYIQTI-------------------TVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMK 222 (606)
T ss_dssp SCCCEE-------------------CTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHH
T ss_pred Ccceec-------------------ChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHH
Confidence 997642 135566666654 8999999999655555544 499999999999874 344
Q ss_pred cCCcccCCCcccceeeccCccCCC------CCCccccccc--cccEEEc-cCCcccCcccccccccccccEEecccccCC
Q 046199 282 SSSKNLIGLPNIERLNLGLNNLSG------RIPGFIFNAS--KLFLLEL-TGNSFSGFIPDTLVNLRNLEHLGLGYNYLT 352 (902)
Q Consensus 282 ~~~~~l~~l~~L~~L~Ls~N~l~~------~~~~~l~~l~--~L~~L~L-s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 352 (902)
.. +.+++.|+.+++..+.+.+ ..+..+..+. .++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.
T Consensus 223 ~~---~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~ 298 (606)
T 3vq2_A 223 TC---LQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK 298 (606)
T ss_dssp HH---HHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC
T ss_pred HH---hccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch
Confidence 44 6778888888887665542 1222233322 4677777 78899988887 999999999999999997
Q ss_pred CCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceeccc
Q 046199 353 SSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGS 432 (902)
Q Consensus 353 ~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 432 (902)
.. +.+..+++|++|++++|.+ +.+|. + .++ +|++|++++|...+.. .+..+++|++|++++|++++.
T Consensus 299 ~l-------~~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~-~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~ 365 (606)
T 3vq2_A 299 YL-------EDVPKHFKWQSLSIIRCQL-KQFPT-L-DLP-FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFS 365 (606)
T ss_dssp CC-------CCCCTTCCCSEEEEESCCC-SSCCC-C-CCS-SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEE
T ss_pred hh-------hhccccccCCEEEcccccC-ccccc-C-CCC-ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCC
Confidence 54 2577889999999999999 67884 4 777 9999999999666544 678999999999999999976
Q ss_pred --CCcccccccccCeeecccccccCCCCCc---CCCCCeEeccCccccCCCC-ccccCCCcCceEecCCCCccCcccccc
Q 046199 433 --IPITVGRLNTLQGLGLENNKLEGPIPDD---LCQLSELHVDHNKLSGPIP-ACFGNLNSLRNLSLGSNELSSFIPSTF 506 (902)
Q Consensus 433 --~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 506 (902)
.|..+..+++|++|++++|.+++ +|.. +.+|+.|++++|++.+..| ..|.++++|++|++++|++++..|..|
T Consensus 366 ~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 444 (606)
T 3vq2_A 366 GCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIF 444 (606)
T ss_dssp EECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred cchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhh
Confidence 48899999999999999999985 4443 4589999999999999888 689999999999999999999999999
Q ss_pred cCCCCceEEEcCCCccCC-CCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCC
Q 046199 507 WNLNNILSFDFSSNSLNG-SLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLE 585 (902)
Q Consensus 507 ~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 585 (902)
..+++|++|++++|++++ .+|..+..+++|++|++++|++++..|..|+++++|+.|+|++|++++.+|..|+.+++|+
T Consensus 445 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred cCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 999999999999999998 4788999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCcCccccccCCccccccc-ccccccccCCcceecCCC
Q 046199 586 SLDLSVNNLSGVIPISLEKLV-YLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 586 ~L~Ls~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~ 624 (902)
.|||++|+++ .+|..+..++ +|+.|++++|++.|.++.
T Consensus 525 ~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 525 TLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999 6777799997 599999999999998886
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.6e-57 Score=537.98 Aligned_cols=514 Identities=20% Similarity=0.195 Sum_probs=442.5
Q ss_pred CcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEE
Q 046199 44 HRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAID 123 (902)
Q Consensus 44 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ld 123 (902)
..++.|||+++.+++..|..++.+++|++|||++|++++..|..|+++++|++|+|++|++++..|. .++++++|++||
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAET-ALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTT-TTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChh-hhcccccccEee
Confidence 4689999999999988889999999999999999999988899999999999999999999976554 468999999999
Q ss_pred cccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCccc--E
Q 046199 124 CNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLL--E 201 (902)
Q Consensus 124 ls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~ 201 (902)
+++|.+++. .|..++++++|++|+|++|++++..++.+..+++|++|+|++|.+++..|..++.+++|+ .
T Consensus 112 L~~n~i~~l--------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 112 FIQTGISSI--------DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTSCCSCG--------GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred ccccCcccC--------CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 999999852 256789999999999999999974434455599999999999999988889999999999 8
Q ss_pred EeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCccccc---
Q 046199 202 LDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSG--- 278 (902)
Q Consensus 202 L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--- 278 (902)
|++++|.++.+ +.......+|+.|++++|. .++..+..+..++...+.-+.+..
T Consensus 184 L~l~~n~l~~~--------------------~~~~~~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~ 240 (606)
T 3t6q_A 184 LNLNGNDIAGI--------------------EPGAFDSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDD 240 (606)
T ss_dssp EECTTCCCCEE--------------------CTTTTTTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCC
T ss_pred EecCCCccCcc--------------------ChhHhhhccccccccCCch---hHHHHhhhccccchhheechhhccccc
Confidence 99999997632 1233344689999999987 334455555555544443332221
Q ss_pred -CCCcCCcccCCCc--ccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCC
Q 046199 279 -SLPSSSKNLIGLP--NIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSST 355 (902)
Q Consensus 279 -~~p~~~~~l~~l~--~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 355 (902)
.++.. .+..+. +|++|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..
T Consensus 241 ~~i~~~--~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~ 317 (606)
T 3t6q_A 241 EDISPA--VFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLC 317 (606)
T ss_dssp CCCCGG--GGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGG
T ss_pred cccChh--HhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCc
Confidence 11111 133333 7899999999999888888999999999999999998 67888999999999999999998776
Q ss_pred CcccccccccCCCCCceeeeccCCCCcccCcc-cccccccccEEEeecCcccccC--CcccCCCCCCcEEEeecceeccc
Q 046199 356 PELSFLSSLANSSSSKYIVLAENPLNGVLPSS-IGNLPITLEEIYLQNCKIRGNI--PKEIGNLVNLTTLHLGNNQLSGS 432 (902)
Q Consensus 356 ~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~ 432 (902)
| ..+..+++|++|++++|.+.+.+|.. +..++ +|++|++++|.+++.. +..+..+++|++|++++|++.+.
T Consensus 318 ~-----~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 391 (606)
T 3t6q_A 318 Q-----ISASNFPSLTHLSIKGNTKRLELGTGCLENLE-NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSL 391 (606)
T ss_dssp G-----GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT-TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEE
T ss_pred h-----hhhhccCcCCEEECCCCCcccccchhhhhccC-cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcC
Confidence 6 67888999999999999998777655 77787 9999999999999776 78899999999999999999999
Q ss_pred CCcccccccccCeeecccccccCCCCCc----CCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCc---cccc
Q 046199 433 IPITVGRLNTLQGLGLENNKLEGPIPDD----LCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSF---IPST 505 (902)
Q Consensus 433 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~ 505 (902)
.|..|..+++|++|++++|++.+..|.. +.+|+.|++++|.+++..|..|.++++|++|++++|++++. .+..
T Consensus 392 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 471 (606)
T 3t6q_A 392 KTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS 471 (606)
T ss_dssp CTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCG
T ss_pred CHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchh
Confidence 9999999999999999999998776543 45899999999999999999999999999999999999873 3367
Q ss_pred ccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCC
Q 046199 506 FWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLE 585 (902)
Q Consensus 506 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 585 (902)
+..+++|++|++++|++++..|..|..+++|++|+|++|++++..|..|..+++| .|+|++|++++.+|..|..+++|+
T Consensus 472 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~ 550 (606)
T 3t6q_A 472 LQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQR 550 (606)
T ss_dssp GGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSS
T ss_pred hccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCC
Confidence 8999999999999999999889999999999999999999999999999999999 999999999999999999999999
Q ss_pred eEeCcCccccccCC
Q 046199 586 SLDLSVNNLSGVIP 599 (902)
Q Consensus 586 ~L~Ls~N~l~~~~p 599 (902)
.|++++|+++...+
T Consensus 551 ~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 551 TINLRQNPLDCTCS 564 (606)
T ss_dssp EEECTTCCEECSGG
T ss_pred EEeCCCCCccccCC
Confidence 99999999987554
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-56 Score=552.07 Aligned_cols=527 Identities=22% Similarity=0.237 Sum_probs=458.8
Q ss_pred CeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccC-cccccCcC
Q 046199 71 QTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAI-PKDIGNLT 149 (902)
Q Consensus 71 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~i-p~~~~~l~ 149 (902)
+..|.++++++ .+|. -.++|++||||+|.+++..|. .++++++|++||+++|...+. + |..+++++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~--------i~~~~f~~L~ 73 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLT--------IDKEAFRNLP 73 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCE--------ECTTTTSSCT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccc--------cCHHHhcCCC
Confidence 46788999998 8897 458999999999999976554 468999999999999976544 4 77899999
Q ss_pred ccceeeecccccCCCCchhhccccccceeecccCcCCCCCChh--hhccCcccEEeeeeCCCCccccccccccCCccccc
Q 046199 150 KLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSS--IFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNL 227 (902)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~ 227 (902)
+|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.++++ .
T Consensus 74 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~----------~---- 139 (844)
T 3j0a_A 74 NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSL----------Y---- 139 (844)
T ss_dssp TCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCC----------C----
T ss_pred CCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccc----------c----
Confidence 9999999999999888999999999999999999999877765 99999999999999996532 1
Q ss_pred cccCCCccccCCCCCCEEEccCccccCcCCCcccCC--CCCceEeccCcccccCCCcCCcccCCCc------ccceeecc
Q 046199 228 WQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNM--STLKALSLLNNTLSGSLPSSSKNLIGLP------NIERLNLG 299 (902)
Q Consensus 228 ~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~l~------~L~~L~Ls 299 (902)
.+..|+++++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+..|.. +..++ .|++|+++
T Consensus 140 ----~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~---~~~~~~~~~~~~L~~L~Ls 212 (844)
T 3j0a_A 140 ----LHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD---WGKCMNPFRNMVLEILDVS 212 (844)
T ss_dssp ----CCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCC---CCSSSCTTTTCCBSEEBCS
T ss_pred ----cchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccc---hhhcCCccccCceeEEecC
Confidence 23679999999999999999999999999988 89999999999999888776 33343 49999999
Q ss_pred CccCCCCCCcccccc---ccccEEEccC---------CcccCccccccccc--ccccEEecccccCCCCCCccccccccc
Q 046199 300 LNNLSGRIPGFIFNA---SKLFLLELTG---------NSFSGFIPDTLVNL--RNLEHLGLGYNYLTSSTPELSFLSSLA 365 (902)
Q Consensus 300 ~N~l~~~~~~~l~~l---~~L~~L~Ls~---------N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~l~~l~ 365 (902)
+|.+++..+..+... ++++.|+++. |.+.+..+..|..+ ++|+.|++++|.+.+..+ ..+.
T Consensus 213 ~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-----~~~~ 287 (844)
T 3j0a_A 213 GNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-----RVFE 287 (844)
T ss_dssp SCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS-----CCSS
T ss_pred CCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh-----hhhh
Confidence 999998888877654 6788888873 44444555566655 789999999999998777 7789
Q ss_pred CCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCe
Q 046199 366 NSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQG 445 (902)
Q Consensus 366 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 445 (902)
.+++|+.|++++|++.+..|..|..++ +|++|+|++|.+++..|..|..+++|++|++++|++++..+..|..+++|++
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLD-NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCS-SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCC-CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 999999999999999999999999998 9999999999999999999999999999999999999888889999999999
Q ss_pred eecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccc-ccccCCCCceEEEcCCCccCC
Q 046199 446 LGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIP-STFWNLNNILSFDFSSNSLNG 524 (902)
Q Consensus 446 L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~ 524 (902)
|+|++|.+++ ++. +.+|+.|++++|+++. +|.. ..+++.|++++|++++... ..+..+++|++|++++|++++
T Consensus 367 L~Ls~N~l~~-i~~-~~~L~~L~l~~N~l~~-l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~ 440 (844)
T 3j0a_A 367 LDLRDNALTT-IHF-IPSIPDIFLSGNKLVT-LPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSS 440 (844)
T ss_dssp EEEETCCSCC-CSS-CCSCSEEEEESCCCCC-CCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCC
T ss_pred EECCCCCCCc-ccC-CCCcchhccCCCCccc-cccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccc
Confidence 9999999984 333 7799999999999994 4543 4679999999999998533 245689999999999999997
Q ss_pred CCcc-ccccccccceeccCCcccc-----ccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccC
Q 046199 525 SLPL-DIGNMKVVVEINLSRNYLT-----GDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVI 598 (902)
Q Consensus 525 ~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 598 (902)
..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..
T Consensus 441 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 520 (844)
T 3j0a_A 441 CSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLS 520 (844)
T ss_dssp CCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCC
T ss_pred cccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccC
Confidence 5443 4667899999999999997 455677999999999999999999999999999999999999999999877
Q ss_pred CcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCCC
Q 046199 599 PISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 599 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 647 (902)
|..+. ++|+.|+|++|++++.+|. .|..+....+.+||+.|.++.
T Consensus 521 ~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 521 HNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCCCSSSC
T ss_pred hhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCccccccc
Confidence 77776 8999999999999999986 477888889999999997765
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.5e-56 Score=528.39 Aligned_cols=529 Identities=22% Similarity=0.218 Sum_probs=454.1
Q ss_pred CCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcC
Q 046199 70 LQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLT 149 (902)
Q Consensus 70 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~ 149 (902)
.+.++.+++.++ .+|..+. ++|++|+|++|.+++. +...++++++|++||+++|.+++. .|..|++++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~i--------~~~~~~~l~ 80 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKIL-KSYSFSNFSELQWLDLSRCEIETI--------EDKAWHGLH 80 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTCCCCEE--------CTTTTTTCT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEe-ChhhccCCccCcEEeCCCCccccc--------CHHHhhchh
Confidence 467999999998 8998776 8999999999999965 444578999999999999999752 467889999
Q ss_pred ccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccc
Q 046199 150 KLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQ 229 (902)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~ 229 (902)
+|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.++++
T Consensus 81 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----------------- 143 (606)
T 3vq2_A 81 HLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC----------------- 143 (606)
T ss_dssp TCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCC-----------------
T ss_pred hcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccce-----------------
Confidence 999999999999987899999999999999999999977778899999999999999997632
Q ss_pred cCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCc----eEeccCcccccCCCcCCcccCCCcccceeeccCccCC-
Q 046199 230 CEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLK----ALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLS- 304 (902)
Q Consensus 230 ~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~- 304 (902)
.+|..++++++|++|+|++|++++..|..+..+++|+ .|++++|.+++..+.. +. ..+|++|++++|.+.
T Consensus 144 -~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~---~~-~~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 144 -KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQA---FQ-GIKLHELTLRGNFNSS 218 (606)
T ss_dssp -CCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTT---TT-TCEEEEEEEESCCSCH
T ss_pred -echHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCccc---cc-CceeeeeeccCCccch
Confidence 3458999999999999999999988888888887776 7999999999654443 33 348999999999987
Q ss_pred CCCCccccccccccEEEccCCcccC------cccccccccc--cccEEec-ccccCCCCCCcccccccccCCCCCceeee
Q 046199 305 GRIPGFIFNASKLFLLELTGNSFSG------FIPDTLVNLR--NLEHLGL-GYNYLTSSTPELSFLSSLANSSSSKYIVL 375 (902)
Q Consensus 305 ~~~~~~l~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~--~L~~L~L-s~N~l~~~~~~~~~l~~l~~l~~L~~L~L 375 (902)
+..|..+.+++.|+.+++..+.+.+ ..+..+..+. +++.+++ ..|.+.+..| . +..+++|+.|++
T Consensus 219 ~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~-----~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV-----K-FHCLANVSAMSL 292 (606)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGG-----S-CGGGTTCSEEEE
T ss_pred hHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccccccccccc-----c-cccCCCCCEEEe
Confidence 5677888999999999987665542 1222233332 4666677 6777776655 3 788899999999
Q ss_pred ccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccC
Q 046199 376 AENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEG 455 (902)
Q Consensus 376 s~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 455 (902)
++|.+.. +| .+..++ +|++|++++|.+ +.+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|++++
T Consensus 293 ~~~~~~~-l~-~l~~~~-~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 364 (606)
T 3vq2_A 293 AGVSIKY-LE-DVPKHF-KWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSF 364 (606)
T ss_dssp ESCCCCC-CC-CCCTTC-CCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEE
T ss_pred cCccchh-hh-hccccc-cCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCC
Confidence 9999974 55 788887 999999999999 5777 45 9999999999999766444 67899999999999999986
Q ss_pred CC--CC---cCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccc-ccccCCCCceEEEcCCCccCCCCccc
Q 046199 456 PI--PD---DLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIP-STFWNLNNILSFDFSSNSLNGSLPLD 529 (902)
Q Consensus 456 ~~--p~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~ 529 (902)
.. |. .+.+|++|++++|.+++ +|..|.++++|+.|++++|++.+..| ..|..+++|++|++++|.+++..|..
T Consensus 365 ~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 443 (606)
T 3vq2_A 365 SGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI 443 (606)
T ss_dssp EEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred CcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhh
Confidence 52 43 45699999999999986 56889999999999999999999888 78999999999999999999999999
Q ss_pred cccccccceeccCCccccc-cCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccccccc
Q 046199 530 IGNMKVVVEINLSRNYLTG-DIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYL 608 (902)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 608 (902)
+..+++|++|++++|++++ .+|..|+.+++|+.|+|++|++++..|..|+.+++|++|+|++|++++.+|..+..+++|
T Consensus 444 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 523 (606)
T 3vq2_A 444 FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 523 (606)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTC
T ss_pred hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcC
Confidence 9999999999999999998 479999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcceecCCCC-Cccc-ccccccccCCcccCCCCCC
Q 046199 609 KDLNLSFNRLEGEIPSG-GSFA-NFSAQSFMGNDLLCGSPHL 648 (902)
Q Consensus 609 ~~L~l~~N~l~~~~p~~-~~~~-~~~~~~~~~n~~lc~~~~~ 648 (902)
+.|++++|+++ .+|.. ..+. ++....+.+||+.|+++..
T Consensus 524 ~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 524 STLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp CEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 99999999999 56653 3343 4677889999999998874
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.2e-53 Score=498.15 Aligned_cols=497 Identities=19% Similarity=0.195 Sum_probs=325.1
Q ss_pred CceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCC
Q 046199 30 SVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFP 109 (902)
Q Consensus 30 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~ 109 (902)
-.|.|.|+ |+.. +++++ .+|+.+. ++|++|||++|++++..|..|+++++|++|+|++|++++.
T Consensus 2 ~~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-- 65 (549)
T 2z81_A 2 LSCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTI-- 65 (549)
T ss_dssp CEECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEE--
T ss_pred ccCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCcc--
Confidence 35999999 9654 44555 6777665 7899999999999977788899999999999999998864
Q ss_pred cccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCC-C
Q 046199 110 SFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTG-T 188 (902)
Q Consensus 110 ~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~ 188 (902)
.|..++++++|++|+|++|++++..|..|+.+++|++|+|++|.+++ .
T Consensus 66 -------------------------------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 66 -------------------------------EGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp -------------------------------CTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred -------------------------------ChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 33455556666666666666665444456666666666666666654 2
Q ss_pred CChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCce
Q 046199 189 IPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKA 268 (902)
Q Consensus 189 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (902)
+|..++++++|++|++++|.+ .+.+| +..++.+++|++|++++|++++..|..+..+++|+.
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~----------~~~~~--------~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVET----------FSEIR--------RIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSS----------CCEEC--------TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred hhhhhhccCCccEEECCCCcc----------ccccC--------HhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 455566666666666666651 12222 235566666666666666666666666666666666
Q ss_pred EeccCcccccCCCcCCcccCCCcccceeeccCccCCCCC---CccccccccccEEEccCCcccCccccc----ccccccc
Q 046199 269 LSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRI---PGFIFNASKLFLLELTGNSFSGFIPDT----LVNLRNL 341 (902)
Q Consensus 269 L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~---~~~l~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L 341 (902)
|++++|.+. .+|..+ +..+++|++|++++|++++.. ......+++|+.|++++|.+.+..+.. +..+++|
T Consensus 177 L~l~~n~~~-~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L 253 (549)
T 2z81_A 177 LTLHLSESA-FLLEIF--ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILEL 253 (549)
T ss_dssp EEEECSBST-THHHHH--HHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTC
T ss_pred EecccCccc-ccchhh--HhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccc
Confidence 666666654 333321 234566666666666666431 112234567777777777776544433 3456777
Q ss_pred cEEecccccCCCCCCcc-cccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCc
Q 046199 342 EHLGLGYNYLTSSTPEL-SFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLT 420 (902)
Q Consensus 342 ~~L~Ls~N~l~~~~~~~-~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 420 (902)
+.+++++|.+.+..... .....+..+.+++.|++.++.+.... .+. ..+..+...++|+
T Consensus 254 ~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~------------------~l~~~~~~~~~L~ 313 (549)
T 2z81_A 254 SEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFY--LFY------------------DLSTVYSLLEKVK 313 (549)
T ss_dssp CEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGG--GSC------------------CCCHHHHHSTTCC
T ss_pred cccccccccccccccccccchhhhhhhcccccccccccccchhh--hcc------------------cchhhhhhcccce
Confidence 88888877776532200 00122334445555555554433210 000 0111112233455
Q ss_pred EEEeecceecccCCccc-ccccccCeeecccccccCCCC------CcCCCCCeEeccCccccCCCC--ccccCCCcCceE
Q 046199 421 TLHLGNNQLSGSIPITV-GRLNTLQGLGLENNKLEGPIP------DDLCQLSELHVDHNKLSGPIP--ACFGNLNSLRNL 491 (902)
Q Consensus 421 ~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p------~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L 491 (902)
.|++++|+++ .+|..+ ..+++|++|++++|++++.+| ..+.+|+.|++++|++++..+ ..+..+++|++|
T Consensus 314 ~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L 392 (549)
T 2z81_A 314 RITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSL 392 (549)
T ss_dssp EEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEE
T ss_pred EEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEE
Confidence 5555555554 334333 345555555555555544332 223466666666666665432 457888899999
Q ss_pred ecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccC
Q 046199 492 SLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLH 571 (902)
Q Consensus 492 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 571 (902)
++++|++++ +|..+..+++|++|++++|++++ +|..+ .++|++|++++|+|++.. ..+++|++|+|++|+|+
T Consensus 393 ~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~ 464 (549)
T 2z81_A 393 DISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK 464 (549)
T ss_dssp ECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS
T ss_pred ECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC
Confidence 999999985 67788888999999999999884 44433 258999999999998643 57899999999999998
Q ss_pred CCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCC
Q 046199 572 GPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSG 625 (902)
Q Consensus 572 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 625 (902)
.+|. .+.+++|+.|||++|++++.+|..+..+++|+.|++++|++.|.+|..
T Consensus 465 -~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 465 -TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp -SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred -cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 6776 568999999999999999988888999999999999999999998853
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-52 Score=495.27 Aligned_cols=528 Identities=20% Similarity=0.217 Sum_probs=374.4
Q ss_pred EEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCc
Q 046199 49 LNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNS 128 (902)
Q Consensus 49 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~ 128 (902)
++.++.+++ .+|..+. +++++|||++|++++..|..|+++++|++|+|++|++++ ++...++++++|++|++++|+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCc
Confidence 344455565 5676553 578999999999987667789999999999999999885 444456778888888888888
Q ss_pred ccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCC-CCChhhhccCcccEEeeeeC
Q 046199 129 LSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTG-TIPSSIFNLSSLLELDFSNN 207 (902)
Q Consensus 129 l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N 207 (902)
+++. .|..|+.+++|++|+|++|++++..+..++.+++|++|+|++|.+++ .+|..|+++++|++|++++|
T Consensus 88 l~~~--------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n 159 (570)
T 2z63_A 88 IQSL--------ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (570)
T ss_dssp CCEE--------CTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTS
T ss_pred CCcc--------CHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCC
Confidence 7642 34678888888888888888885444468888888888888888876 46888888888888888888
Q ss_pred CCCccccccccccCCccccccccCCCccccCCCCC----CEEEccCccccCcCCCcccCCCCCceEeccCcccccC-CCc
Q 046199 208 SLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNL----EVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGS-LPS 282 (902)
Q Consensus 208 ~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 282 (902)
.++.+ .|..++.+++| +.|++++|.+++..|..+..+ +|+.|++++|..... +|.
T Consensus 160 ~l~~~-------------------~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~ 219 (570)
T 2z63_A 160 KIQSI-------------------YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKT 219 (570)
T ss_dssp CCCEE-------------------CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHH
T ss_pred cccee-------------------cHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhh
Confidence 86532 13566667777 788888888887767666655 788888888754321 122
Q ss_pred CCcccCCCcccceeeccCccCC------CCCCccccccc--cccEEEccCC-cccCcccccccccccccEEecccccCCC
Q 046199 283 SSKNLIGLPNIERLNLGLNNLS------GRIPGFIFNAS--KLFLLELTGN-SFSGFIPDTLVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 283 ~~~~l~~l~~L~~L~Ls~N~l~------~~~~~~l~~l~--~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 353 (902)
. +..++.++.+.+....+. ......+..+. .++.+++++| .+.+..|..+..+++|++|++++|.+++
T Consensus 220 ~---~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~ 296 (570)
T 2z63_A 220 C---IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER 296 (570)
T ss_dssp H---HHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS
T ss_pred h---hcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh
Confidence 2 344555555444432221 11122222222 2456666666 5666666666667777777777776664
Q ss_pred CCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccC
Q 046199 354 STPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSI 433 (902)
Q Consensus 354 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 433 (902)
. | ..+..+ +|++|++++|.+. .+|. ..++ +|+.|++++|.+.+..+. ..+++|++|++++|++++..
T Consensus 297 l-~-----~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~-~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~ 363 (570)
T 2z63_A 297 V-K-----DFSYNF-GWQHLELVNCKFG-QFPT--LKLK-SLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKG 363 (570)
T ss_dssp C-C-----BCCSCC-CCSEEEEESCBCS-SCCB--CBCS-SCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEE
T ss_pred h-h-----hhhccC-CccEEeeccCccc-ccCc--cccc-ccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccc
Confidence 2 2 233444 5666666666555 3333 2333 555566666555544433 45555555555555555332
Q ss_pred --CcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccc-ccccCCC
Q 046199 434 --PITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIP-STFWNLN 510 (902)
Q Consensus 434 --p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 510 (902)
|..+..++ +|++|++++|.+++..+. +..+++|+.|++++|++.+..+ ..|..++
T Consensus 364 ~~~~~~~~~~---------------------~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 364 CCSQSDFGTT---------------------SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp EEEHHHHTCS---------------------CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred cccccccccC---------------------ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 34444444 455555555555554444 8889999999999999988766 5788999
Q ss_pred CceEEEcCCCccCCCCccccccccccceeccCCcccc-ccCccccccCCccceEEccCcccCCCccccccccccCCeEeC
Q 046199 511 NILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLT-GDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDL 589 (902)
Q Consensus 511 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 589 (902)
+|++|++++|.+++..|..+..+++|++|++++|+++ +.+|..|..+++|++|+|++|++++..|..|+.+++|+.|+|
T Consensus 422 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 501 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501 (570)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeC
Confidence 9999999999999888999999999999999999998 678999999999999999999999888999999999999999
Q ss_pred cCccccccCCcccccccccccccccCCcceecCCCCCcc-ccccc--ccccCCcccCCCCC
Q 046199 590 SVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSF-ANFSA--QSFMGNDLLCGSPH 647 (902)
Q Consensus 590 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~-~~~~~--~~~~~n~~lc~~~~ 647 (902)
++|++++..|..+..+++|+.|++++|+++|.+|....+ .++.. ..+.+.+ .|+.|.
T Consensus 502 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~~ 561 (570)
T 2z63_A 502 ASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGSG 561 (570)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTTC
T ss_pred CCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCCC
Confidence 999999988888999999999999999999999975443 33322 2344544 676654
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=480.51 Aligned_cols=513 Identities=22% Similarity=0.230 Sum_probs=367.8
Q ss_pred CCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcC
Q 046199 70 LQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLT 149 (902)
Q Consensus 70 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~ 149 (902)
.+.++.++.+++ .+|..+. +++++|+|++|++++. +...+.++++|++||+++|++++. .|..+++++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~i--------~~~~~~~l~ 76 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTI--------EDGAYQSLS 76 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEE-CTTTTTTCSSCCEEECTTCCCCEE--------CTTTTTTCT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCcc-ChhHhhCCCCceEEECCCCcCCcc--------CcccccCch
Confidence 356777787887 7887654 5788999999988853 333345566666666666655431 234455566
Q ss_pred ccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccc
Q 046199 150 KLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQ 229 (902)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~ 229 (902)
+|++|+|++|++++..|..|+.+++|++|++++|++++..+..++++++|++|+|++|.++.+
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~----------------- 139 (570)
T 2z63_A 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF----------------- 139 (570)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCC-----------------
T ss_pred hCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCcccee-----------------
Confidence 666666666666544445566666666666666666543333455566666666666554321
Q ss_pred cCCCccccCCCCCCEEEccCccccCcCCCcccCCCCC----ceEeccCcccccCCCcCCcccCCCcccceeeccCccCCC
Q 046199 230 CEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTL----KALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSG 305 (902)
Q Consensus 230 ~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 305 (902)
.+|..++++++|++|++++|++++..|..+..+++| +.|++++|.+++.
T Consensus 140 -~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~-------------------------- 192 (570)
T 2z63_A 140 -KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI-------------------------- 192 (570)
T ss_dssp -CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE--------------------------
T ss_pred -cChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceec--------------------------
Confidence 123555555556666666555555445555555555 4555555555544
Q ss_pred CCCccccccccccEEEccCCcccC-cccccccccccccEEecccccCCCCCC----cccccccccCCCCCceeeeccC-C
Q 046199 306 RIPGFIFNASKLFLLELTGNSFSG-FIPDTLVNLRNLEHLGLGYNYLTSSTP----ELSFLSSLANSSSSKYIVLAEN-P 379 (902)
Q Consensus 306 ~~~~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~l~~l~~l~~L~~L~Ls~N-~ 379 (902)
.|+.+... +|+.|++++|.... ..+..+..+++++.+.+..+.+..... ....+..+..+ .++.++++++ .
T Consensus 193 -~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l-~l~~l~l~~~~~ 269 (570)
T 2z63_A 193 -QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL-TIEEFRLAYLDY 269 (570)
T ss_dssp -CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGS-EEEEEEEEETTE
T ss_pred -CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccccc-chhhhhhhcchh
Confidence 33333332 44444444443221 223334444444444443322221100 00001122222 3567777777 6
Q ss_pred CCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCC
Q 046199 380 LNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPD 459 (902)
Q Consensus 380 l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 459 (902)
+.+..|..+..++ +|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+..+.
T Consensus 270 ~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 270 YLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp EESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC
T ss_pred hhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc
Confidence 7778888888888 9999999999998 578888888 9999999999998 5665 5788999999999999877664
Q ss_pred -cCCCCCeEeccCccccCCC--CccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCc-cccccccc
Q 046199 460 -DLCQLSELHVDHNKLSGPI--PACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLP-LDIGNMKV 535 (902)
Q Consensus 460 -~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~ 535 (902)
.+.+|+.|++++|++++.. |..+.++++|++|++++|++++..+. +..+++|++|++++|.+++..| ..+..+++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 422 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCC
Confidence 5669999999999998765 77899999999999999999986555 9999999999999999998766 57899999
Q ss_pred cceeccCCccccccCccccccCCccceEEccCcccC-CCccccccccccCCeEeCcCccccccCCccccccccccccccc
Q 046199 536 VVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLH-GPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLS 614 (902)
Q Consensus 536 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 614 (902)
|++|++++|++++..|..|.++++|+.|+|++|+++ +.+|..|+.+++|+.|+|++|++++..|..+..+++|+.|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 999999999999999999999999999999999998 6789999999999999999999999999999999999999999
Q ss_pred CCcceecCCCC-CcccccccccccCCcccCCCCCC
Q 046199 615 FNRLEGEIPSG-GSFANFSAQSFMGNDLLCGSPHL 648 (902)
Q Consensus 615 ~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~~ 648 (902)
+|++++..|.. ..+..+....+.+|+..|..|..
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999887753 56677888899999999987753
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.1e-52 Score=494.36 Aligned_cols=358 Identities=19% Similarity=0.267 Sum_probs=247.8
Q ss_pred CccccCcCCCcccCCCCCceEeccCcccccC-----------------CCcCCcccC--CCcccceeeccCccCCCCCCc
Q 046199 249 ENHLVGDVPNTIFNMSTLKALSLLNNTLSGS-----------------LPSSSKNLI--GLPNIERLNLGLNNLSGRIPG 309 (902)
Q Consensus 249 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~~l~--~l~~L~~L~Ls~N~l~~~~~~ 309 (902)
.|++++ +|..++++++|++|+|++|++++. +|.. +. ++++|++|+|++|++.+.+|.
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~---l~~~~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED---LKWDNLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC---CCGGGCTTCCEEEEECCTTCSSCCT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchh---hhhcccCCCCEEEecCCcCCccChH
Confidence 355554 555555555555555555555553 5655 44 566677777777776667777
Q ss_pred cccccccccEEEccCCc-ccC-ccccccccc------ccccEEecccccCCCCCCcccccc--cccCCCCCceeeeccCC
Q 046199 310 FIFNASKLFLLELTGNS-FSG-FIPDTLVNL------RNLEHLGLGYNYLTSSTPELSFLS--SLANSSSSKYIVLAENP 379 (902)
Q Consensus 310 ~l~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~~~~~~l~--~l~~l~~L~~L~Ls~N~ 379 (902)
.++++++|++|+|++|+ +++ .+|..++.+ ++|++|++++|+++ ..| . .+.++++|++|++++|.
T Consensus 268 ~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip-----~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFP-----VETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCC-----CHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccC-----chhhhccCCCCCEEeCcCCc
Confidence 77777777777777776 776 667766665 77777777777776 333 3 45555666666666666
Q ss_pred CCcccCcccccccccccEEEeecCcccccCCcccCCCCC-CcEEEeecceecccCCccccccc--ccCeeecccccccCC
Q 046199 380 LNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVN-LTTLHLGNNQLSGSIPITVGRLN--TLQGLGLENNKLEGP 456 (902)
Q Consensus 380 l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~ 456 (902)
+.|.+| .+..++ +|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..+. +|++|++++|+++
T Consensus 342 l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~-- 415 (636)
T 4eco_A 342 LEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIG-- 415 (636)
T ss_dssp CEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTT--
T ss_pred Cccchh-hhCCCC-CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCC--
Confidence 665555 555555 6666666666666 55555666666 666666666666 4555554433 4555555555554
Q ss_pred CCCcCCCCCeEeccCccccCCCCcccc-------CCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccc
Q 046199 457 IPDDLCQLSELHVDHNKLSGPIPACFG-------NLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLD 529 (902)
Q Consensus 457 ~p~~l~~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 529 (902)
+..|..|. .+++|+.|+|++|+++++.+..+..+++|++|++++|+++ .+|..
T Consensus 416 -------------------~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~ 475 (636)
T 4eco_A 416 -------------------SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKN 475 (636)
T ss_dssp -------------------TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSS
T ss_pred -------------------CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHH
Confidence 44444444 5667777777777777655555666777777777777777 34443
Q ss_pred ccc--------ccccceeccCCccccccCccccc--cCCccceEEccCcccCCCccccccccccCCeEeC------cCcc
Q 046199 530 IGN--------MKVVVEINLSRNYLTGDIPTTIG--GLTNLQLLSLENNRLHGPIPESFGALTSLESLDL------SVNN 593 (902)
Q Consensus 530 ~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~ 593 (902)
+.. +++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|+
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~ 553 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCB
T ss_pred HhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCc
Confidence 322 238888888888888 6777776 88888899999998886 7888888888999988 6788
Q ss_pred ccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCC
Q 046199 594 LSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSP 646 (902)
Q Consensus 594 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 646 (902)
+.+.+|..+..+++|+.|+|++|++ +.+|.. -+..+....+.+|+..|-..
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEEC
T ss_pred ccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccccH
Confidence 9999999999999999999999999 788875 33778888999999887543
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.5e-51 Score=475.36 Aligned_cols=463 Identities=20% Similarity=0.226 Sum_probs=316.4
Q ss_pred eeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCcc
Q 046199 72 TLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKL 151 (902)
Q Consensus 72 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L 151 (902)
+||+++|+++ .+|..+. ++|++|+|++|.+++..| ..++++++|++||+++|++++. .|..++++++|
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~--------~~~~~~~l~~L 71 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWT-SDILSLSKLRILIISHNRIQYL--------DISVFKFNQEL 71 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCH-HHHTTCTTCCEEECCSSCCCEE--------EGGGGTTCTTC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccCh-hhccccccccEEecCCCccCCc--------ChHHhhcccCC
Confidence 4455555554 4444443 455555555555543222 1223344444444444444321 35667777777
Q ss_pred ceeeecccccCCCCchhhccccccceeecccCcCCC-CCChhhhccCcccEEeeeeCCCCccccccccccCCcccccccc
Q 046199 152 KELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTG-TIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQC 230 (902)
Q Consensus 152 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~ 230 (902)
++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.++.
T Consensus 72 ~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~------------------- 129 (520)
T 2z7x_B 72 EYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK------------------- 129 (520)
T ss_dssp CEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-------------------
T ss_pred CEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch-------------------
Confidence 77777777777 56665 67777777777777775 466777777777777777777542
Q ss_pred CCCccccCCCCC--CEEEccCccc--cCcCCCcccCCC-CCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCC
Q 046199 231 EIPHEIGNLPNL--EVLGIDENHL--VGDVPNTIFNMS-TLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSG 305 (902)
Q Consensus 231 ~lp~~l~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 305 (902)
..+..+++| +.|++++|++ .+..|..+..+. +...+++++|++.+.++... +.++++|+.|++++|.-..
T Consensus 130 ---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~--~~~l~~L~~L~l~~n~~~~ 204 (520)
T 2z7x_B 130 ---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVS--VKTVANLELSNIKCVLEDN 204 (520)
T ss_dssp ---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCC--CTTCSEEEECCEEECCSTT
T ss_pred ---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhh--hhcccceeecccccccccc
Confidence 234445555 7777777777 666666666554 23345566666655544432 4445555555555544100
Q ss_pred CCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccC
Q 046199 306 RIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLP 385 (902)
Q Consensus 306 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p 385 (902)
... .+.+.+| .+..+++|+.|++++|.+++..+ .+..
T Consensus 205 ~~~-----------------~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~------------------------~~~~- 241 (520)
T 2z7x_B 205 KCS-----------------YFLSILA-KLQTNPKLSNLTLNNIETTWNSF------------------------IRIL- 241 (520)
T ss_dssp TTH-----------------HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHH------------------------HHHH-
T ss_pred ccc-----------------eeecchh-hhccccchhhccccccccCHHHH------------------------HHHH-
Confidence 000 0333333 45566666666666665543111 0000
Q ss_pred cccccccccccEEEeecCcccccCCccc-----CCCCCCcEEEeecceecccCC-cccccc---cccCeeecccccccCC
Q 046199 386 SSIGNLPITLEEIYLQNCKIRGNIPKEI-----GNLVNLTTLHLGNNQLSGSIP-ITVGRL---NTLQGLGLENNKLEGP 456 (902)
Q Consensus 386 ~~~~~l~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~ 456 (902)
..+ ..+ +|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.
T Consensus 242 ~~~-~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~ 317 (520)
T 2z7x_B 242 QLV-WHT-TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHM 317 (520)
T ss_dssp HHH-HTS-SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHh-hhC-cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccc
Confidence 000 012 56677777777776666666 7777888888888887 344 455544 5688888888887654
Q ss_pred C-CCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccC--cccccccCCCCceEEEcCCCccCCCCcc-cccc
Q 046199 457 I-PDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSS--FIPSTFWNLNNILSFDFSSNSLNGSLPL-DIGN 532 (902)
Q Consensus 457 ~-p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~ 532 (902)
. +..+.+|++|++++|++++..|..+.++++|+.|++++|++++ .+|..|..+++|++|++++|++++.+|. .+..
T Consensus 318 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 397 (520)
T 2z7x_B 318 LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW 397 (520)
T ss_dssp CCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCC
T ss_pred cchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhcc
Confidence 3 3667789999999999998889999999999999999999997 4567899999999999999999985565 4888
Q ss_pred ccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcc-cccccccccc
Q 046199 533 MKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPIS-LEKLVYLKDL 611 (902)
Q Consensus 533 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L 611 (902)
+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++ +|.. +..+++|+.|
T Consensus 398 l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 398 TKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKI 473 (520)
T ss_dssp CTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEE
T ss_pred CccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEE
Confidence 99999999999999988887775 79999999999999 788888899999999999999995 5654 8999999999
Q ss_pred cccCCcceecCCC
Q 046199 612 NLSFNRLEGEIPS 624 (902)
Q Consensus 612 ~l~~N~l~~~~p~ 624 (902)
++++|+++|.++.
T Consensus 474 ~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 474 WLHTNPWDCSCPR 486 (520)
T ss_dssp ECCSSCBCCCHHH
T ss_pred ECcCCCCcccCCc
Confidence 9999999998874
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.8e-49 Score=467.87 Aligned_cols=479 Identities=23% Similarity=0.260 Sum_probs=334.3
Q ss_pred eeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccc
Q 046199 73 LDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLK 152 (902)
Q Consensus 73 L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~ 152 (902)
.|+++|.++ .+|+.+. ++|++|+|++|++++. .|..++++++|+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~---------------------------------~~~~~~~l~~L~ 53 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYI---------------------------------GHGDLRACANLQ 53 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEE---------------------------------CSSTTSSCTTCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCcc---------------------------------ChhhhhcCCccc
Confidence 456666666 6666544 5666666666665532 355666777777
Q ss_pred eeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCC
Q 046199 153 ELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEI 232 (902)
Q Consensus 153 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~l 232 (902)
+|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.++.+ ..
T Consensus 54 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~------------------~~ 115 (549)
T 2z81_A 54 VLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTL------------------GV 115 (549)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSS------------------CS
T ss_pred EEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCccccc------------------ch
Confidence 777777777766667777777777777777777766666677777777777777775421 12
Q ss_pred CccccCCCCCCEEEccCccccCcCC-CcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccc
Q 046199 233 PHEIGNLPNLEVLGIDENHLVGDVP-NTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFI 311 (902)
Q Consensus 233 p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l 311 (902)
|..++++++|++|++++|++.+.+| ..+.++++|++|++++|++++..|.. +..+++|++|+++.|.+....+..+
T Consensus 116 ~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---l~~l~~L~~L~l~~n~~~~~~~~~~ 192 (549)
T 2z81_A 116 TSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS---LKSIRDIHHLTLHLSESAFLLEIFA 192 (549)
T ss_dssp SCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT---TTTCSEEEEEEEECSBSTTHHHHHH
T ss_pred hhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh---hhccccCceEecccCcccccchhhH
Confidence 3556667777777777776433443 45666666666666666666555544 4445555555555555542222222
Q ss_pred cccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCc----c
Q 046199 312 FNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPS----S 387 (902)
Q Consensus 312 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~----~ 387 (902)
..+++|++|++++|++++.... + ......+++|+.|++++|.+.+..+. .
T Consensus 193 ~~l~~L~~L~L~~n~l~~~~~~----------------------~----~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 246 (549)
T 2z81_A 193 DILSSVRYLELRDTNLARFQFS----------------------P----LPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246 (549)
T ss_dssp HSTTTBSEEEEESCBCTTCCCC----------------------C----CSSCCCCCCCCEEEEESCEEEHHHHHHHHGG
T ss_pred hhcccccEEEccCCcccccccc----------------------c----cchhhhhhcccceeccccccchhHHHHHHHH
Confidence 3344555555555554432100 0 01122344555555555555443222 2
Q ss_pred cccccccccEEEeecCcccccC------CcccCCCCCCcEEEeecceeccc-----CCcccccccccCeeecccccccCC
Q 046199 388 IGNLPITLEEIYLQNCKIRGNI------PKEIGNLVNLTTLHLGNNQLSGS-----IPITVGRLNTLQGLGLENNKLEGP 456 (902)
Q Consensus 388 ~~~l~~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~ 456 (902)
+..++ +++.+++++|.+.+.. ...+..+++|+.|+++++.+... ++..+....+|+.|++++|++. .
T Consensus 247 ~~~~~-~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ 324 (549)
T 2z81_A 247 LRYIL-ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-L 324 (549)
T ss_dssp GGGCT-TCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-C
T ss_pred hhhhc-cccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-c
Confidence 23334 6777777777776531 23456778899999999887632 2223445678999999999997 6
Q ss_pred CCCc----CCCCCeEeccCccccCCCC---ccccCCCcCceEecCCCCccCccc--ccccCCCCceEEEcCCCccCCCCc
Q 046199 457 IPDD----LCQLSELHVDHNKLSGPIP---ACFGNLNSLRNLSLGSNELSSFIP--STFWNLNNILSFDFSSNSLNGSLP 527 (902)
Q Consensus 457 ~p~~----l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~ls~N~l~~~~~ 527 (902)
+|.. +.+|++|++++|++++..| ..++.+++|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|
T Consensus 325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 403 (549)
T 2z81_A 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMP 403 (549)
T ss_dssp CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCC
T ss_pred CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCC
Confidence 7753 5699999999999998764 357889999999999999998654 56899999999999999999 578
Q ss_pred cccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccc
Q 046199 528 LDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVY 607 (902)
Q Consensus 528 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 607 (902)
..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++
T Consensus 404 ~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~ 474 (549)
T 2z81_A 404 DSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPV 474 (549)
T ss_dssp SCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTT
T ss_pred hhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCcc
Confidence 89999999999999999998 4555442 68999999999999753 57899999999999999 6776 567999
Q ss_pred cccccccCCcceecCCCC-CcccccccccccCCcccCCCC
Q 046199 608 LKDLNLSFNRLEGEIPSG-GSFANFSAQSFMGNDLLCGSP 646 (902)
Q Consensus 608 L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 646 (902)
|+.|+|++|++++.+|.. ..+..+....+.+|++.|..|
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999999999888763 566778888999999988766
No 19
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.6e-48 Score=466.48 Aligned_cols=527 Identities=21% Similarity=0.222 Sum_probs=403.8
Q ss_pred EeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcc
Q 046199 50 NISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSL 129 (902)
Q Consensus 50 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l 129 (902)
|-++.+|+ .+|+.+- +++++||||+|++++..|.+|.++++|++|||++|++++ +|...++++++|++|||++|++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcC
Confidence 33455665 6776553 468889999998885445678888999999999998884 5555668888888888888888
Q ss_pred cCcCCcchhccCc-ccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCC-CCChhhhccCcccEEeeeeC
Q 046199 130 SGELPANIFRAIP-KDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTG-TIPSSIFNLSSLLELDFSNN 207 (902)
Q Consensus 130 ~~~~~~~~~~~ip-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N 207 (902)
++ +| ..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|
T Consensus 113 ~~---------l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 113 QS---------LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp CE---------ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CC---------CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 64 44 457888889999999998886555678888889999999888875 46778888888999999888
Q ss_pred CCCccccccccccCCccccccccCCCccccCCCC----CCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcC
Q 046199 208 SLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPN----LEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSS 283 (902)
Q Consensus 208 ~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~----L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 283 (902)
+|+.+. |..+..+.+ +..++++.|.++. ++........++.+++++|..+..++..
T Consensus 184 ~l~~~~-------------------~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~n~~~~~~~~~ 243 (635)
T 4g8a_A 184 KIQSIY-------------------CTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKT 243 (635)
T ss_dssp CCCEEC-------------------GGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSSHHHHHH
T ss_pred cccccc-------------------cccccchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhcccccccccch
Confidence 866431 234444433 3467888888874 4444445556778888888665332222
Q ss_pred CcccCCCcccceeeccCcc------CCCCCCccccccccccEEEccCCcccCc---ccccccccccccEEecccccCCCC
Q 046199 284 SKNLIGLPNIERLNLGLNN------LSGRIPGFIFNASKLFLLELTGNSFSGF---IPDTLVNLRNLEHLGLGYNYLTSS 354 (902)
Q Consensus 284 ~~~l~~l~~L~~L~Ls~N~------l~~~~~~~l~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~~~ 354 (902)
. +..+..++...+..+. +.......+.....+...++..+..... .+..+..+.+++.+++..+.+...
T Consensus 244 ~--~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 244 C--IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp H--HHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred h--hcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc
Confidence 1 4455555555554332 3333444555666777777766554322 234456678888888888877654
Q ss_pred CCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceec--cc
Q 046199 355 TPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLS--GS 432 (902)
Q Consensus 355 ~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~ 432 (902)
..+....+++.|++.+|.+.+..+..+ + .++.+++..|.+... ..+..+++|+.|++++|.+. +.
T Consensus 322 -------~~~~~~~~L~~L~l~~~~~~~~~~~~l---~-~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 322 -------KDFSYNFGWQHLELVNCKFGQFPTLKL---K-SLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp -------GGGGSCCCCSEEEEESCEESSCCCCBC---T-TCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEE
T ss_pred -------cccccchhhhhhhcccccccCcCcccc---h-hhhhcccccccCCCC--cccccccccccchhhccccccccc
Confidence 334566788889999988876544333 3 788899999987743 33557889999999999886 34
Q ss_pred CCcccccccccCeeecccccccCCCCC--cCCCCCeEeccCccccCCCC-ccccCCCcCceEecCCCCccCcccccccCC
Q 046199 433 IPITVGRLNTLQGLGLENNKLEGPIPD--DLCQLSELHVDHNKLSGPIP-ACFGNLNSLRNLSLGSNELSSFIPSTFWNL 509 (902)
Q Consensus 433 ~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 509 (902)
.+..+..+.+|+.++++.|.+....+. .+.+|+.+++++|......+ ..|..+++++.++++.|++.+..+..+..+
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~ 468 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 468 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred cccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 566777888999999999987643332 34589999999888776654 478899999999999999999999999999
Q ss_pred CCceEEEcCCCcc-CCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEe
Q 046199 510 NNILSFDFSSNSL-NGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLD 588 (902)
Q Consensus 510 ~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 588 (902)
+.++.|++++|.+ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++||
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 9999999999985 445788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCccccccCCcccccc-cccccccccCCcceecCCC
Q 046199 589 LSVNNLSGVIPISLEKL-VYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 589 Ls~N~l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~ 624 (902)
|++|+|++..|..+..+ ++|+.|+|++|+|.|.+.-
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 99999999999999988 6899999999999998764
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-48 Score=456.18 Aligned_cols=456 Identities=20% Similarity=0.248 Sum_probs=353.4
Q ss_pred EEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCccc
Q 046199 121 AIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLL 200 (902)
Q Consensus 121 ~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 200 (902)
+||+++|.++. +|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|+
T Consensus 4 ~l~ls~n~l~~---------ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 72 (520)
T 2z7x_B 4 LVDRSKNGLIH---------VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72 (520)
T ss_dssp EEECTTSCCSS---------CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCC
T ss_pred eEecCCCCccc---------cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCC
Confidence 45555555542 565555 6889999999999877778888999999999999999877788888999999
Q ss_pred EEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccC-cCCCcccCCCCCceEeccCcccccC
Q 046199 201 ELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVG-DVPNTIFNMSTLKALSLLNNTLSGS 279 (902)
Q Consensus 201 ~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ 279 (902)
+|+|++|+|+. +| .. .+++|++|+|++|++++ .+|..++++++|++|++++|++++.
T Consensus 73 ~L~Ls~N~l~~-----------lp---------~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 130 (520)
T 2z7x_B 73 YLDLSHNKLVK-----------IS---------CH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS 130 (520)
T ss_dssp EEECCSSCCCE-----------EE---------CC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG
T ss_pred EEecCCCceee-----------cC---------cc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh
Confidence 99999998663 22 44 68889999999998886 4678888888888888888888751
Q ss_pred CCcCCcccCCCccc--ceeeccCccC--CCCCCccccccc-cccEEEccCCcccCcccc-cccccccccEEecccccCCC
Q 046199 280 LPSSSKNLIGLPNI--ERLNLGLNNL--SGRIPGFIFNAS-KLFLLELTGNSFSGFIPD-TLVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 280 ~p~~~~~l~~l~~L--~~L~Ls~N~l--~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~ 353 (902)
. +..+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+.++. .+..+++|+.|++++|.-..
T Consensus 131 ---~---~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 204 (520)
T 2z7x_B 131 ---S---VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDN 204 (520)
T ss_dssp ---G---GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTT
T ss_pred ---h---ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccc
Confidence 2 4455555 7777777777 666666665544 334556666666544333 34455555555555554110
Q ss_pred CCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccC---CCCCCcEEEeecceec
Q 046199 354 STPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIG---NLVNLTTLHLGNNQLS 430 (902)
Q Consensus 354 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~ 430 (902)
... .+.+.+| .+..++ +|+.|++++|.+++..+..+. ..++|++|++++|+++
T Consensus 205 ~~~----------------------~~~~~~~-~l~~l~-~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 260 (520)
T 2z7x_B 205 KCS----------------------YFLSILA-KLQTNP-KLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQ 260 (520)
T ss_dssp TTH----------------------HHHHHHH-GGGGCT-TCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEE
T ss_pred ccc----------------------eeecchh-hhcccc-chhhccccccccCHHHHHHHHHHhhhCcccEEEeeccccc
Confidence 000 0333444 556666 788888888877754322221 2468999999999999
Q ss_pred ccCCccc-----ccccccCeeecccccccCCCCC-cC------CCCCeEeccCccccCCCCccccCCCcCceEecCCCCc
Q 046199 431 GSIPITV-----GRLNTLQGLGLENNKLEGPIPD-DL------CQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNEL 498 (902)
Q Consensus 431 ~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~-~l------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 498 (902)
|.+|..+ ..+++|+.+++++|.+ .+|. .+ .+|+.|++++|.+.+.. .+..+++|++|++++|++
T Consensus 261 ~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l 336 (520)
T 2z7x_B 261 GQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLL 336 (520)
T ss_dssp SCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCC
T ss_pred CccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCcc
Confidence 9999998 9999999999999999 5662 22 36999999999987543 236889999999999999
Q ss_pred cCcccccccCCCCceEEEcCCCccCC--CCccccccccccceeccCCccccccCcc-ccccCCccceEEccCcccCCCcc
Q 046199 499 SSFIPSTFWNLNNILSFDFSSNSLNG--SLPLDIGNMKVVVEINLSRNYLTGDIPT-TIGGLTNLQLLSLENNRLHGPIP 575 (902)
Q Consensus 499 ~~~~~~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p 575 (902)
++..|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|. .|..+++|+.|++++|++++.+|
T Consensus 337 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 337 TDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred ChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 99999999999999999999999997 4567899999999999999999985665 48899999999999999998888
Q ss_pred ccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCC--CcccccccccccCCcccCCCCC
Q 046199 576 ESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSG--GSFANFSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 576 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~lc~~~~ 647 (902)
..+. ++|+.|||++|+++ .+|..+..+++|+.|++++|+++ .+|.. ..+..+....+.+|+..|.++.
T Consensus 417 ~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 417 RCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 7775 79999999999999 78988889999999999999999 46653 4566777888999999887664
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.2e-48 Score=467.84 Aligned_cols=452 Identities=18% Similarity=0.225 Sum_probs=354.9
Q ss_pred CccceeeecccccCCCCchhhccccccceeec-ccCcCCCCCChhhhccCcccEEeeeeCCCCccc----------cccc
Q 046199 149 TKLKELYLGYNKLQGEIPQELGNLAELEWLSL-PRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFY----------MTNN 217 (902)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----------~~~~ 217 (902)
..++.|+|++|.++|.+|++|++|++|++|+| ++|.++|..|-..... .++++...+..+. ....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~----~~~l~~~~l~~lr~~~~~~~l~~~~~~ 398 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL----TPDMSEERKHRIRMHYKKMFLDYDQRL 398 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC----CSSCCHHHHHHHHTHHHHHHTCCCGGG
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc----ccccchhHHHHHHHhhhhhhhccCcch
Confidence 35788888888888888888888888888888 7887777644221111 0011000000000 0000
Q ss_pred cccCCccccccc--cCCCccccCCCCCCEEEccC--ccccCcCCCcccCCCCCceEeccCccccc---------------
Q 046199 218 HFTGSIPRNLWQ--CEIPHEIGNLPNLEVLGIDE--NHLVGDVPNTIFNMSTLKALSLLNNTLSG--------------- 278 (902)
Q Consensus 218 ~~~g~ip~~~~~--~~lp~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--------------- 278 (902)
.+++.++..+-. ...+........++.+.++. |++++ +|..++++++|+.|+|++|++++
T Consensus 399 ~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~ 477 (876)
T 4ecn_A 399 NLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYA 477 (876)
T ss_dssp GSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred hhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccc
Confidence 011101000000 00011112233444455544 88887 88889999999999999999987
Q ss_pred --CCCcCCcccC--CCcccceeeccCccCCCCCCccccccccccEEEccCCc-ccC-cccccccccc-------cccEEe
Q 046199 279 --SLPSSSKNLI--GLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNS-FSG-FIPDTLVNLR-------NLEHLG 345 (902)
Q Consensus 279 --~~p~~~~~l~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~-------~L~~L~ 345 (902)
.+|.. +. ++++|++|+|++|++.+.+|..++++++|+.|+|++|+ +++ .+|..+..++ +|++|+
T Consensus 478 ~g~iP~~---l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 478 KQYENEE---LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHTTSC---CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred cccCChh---hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 37877 55 89999999999999999999999999999999999998 988 7888777776 999999
Q ss_pred cccccCCCCCCcccccc--cccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCC-CcEE
Q 046199 346 LGYNYLTSSTPELSFLS--SLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVN-LTTL 422 (902)
Q Consensus 346 Ls~N~l~~~~~~~~~l~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L 422 (902)
+++|+++ ..| . .+.++++|++|++++|.+. .+| .+..++ +|+.|+|++|+++ .+|..+..+++ |+.|
T Consensus 555 Ls~N~L~-~ip-----~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L 624 (876)
T 4ecn_A 555 MGYNNLE-EFP-----ASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDFCAFTDQVEGL 624 (876)
T ss_dssp CCSSCCC-BCC-----CHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTTSCEECTTCCEE
T ss_pred eeCCcCC-ccC-----ChhhhhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHHHhhccccCCEE
Confidence 9999999 555 4 6889999999999999998 788 888888 9999999999999 88889999999 9999
Q ss_pred EeecceecccCCcccccccc--cCeeecccccccCCCCCcC--------CCCCeEeccCccccCCCCccccCCCcCceEe
Q 046199 423 HLGNNQLSGSIPITVGRLNT--LQGLGLENNKLEGPIPDDL--------CQLSELHVDHNKLSGPIPACFGNLNSLRNLS 492 (902)
Q Consensus 423 ~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~l--------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 492 (902)
+|++|+++ .+|..+..+.. |+.|++++|++.+.+|... .+|+.|+|++|+++...+..+..+++|+.|+
T Consensus 625 ~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 625 GFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703 (876)
T ss_dssp ECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEE
T ss_pred ECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEE
Confidence 99999999 78888887755 9999999999998776422 2799999999999965555566899999999
Q ss_pred cCCCCccCcccccccCC-------CCceEEEcCCCccCCCCccccc--cccccceeccCCccccccCccccccCCccceE
Q 046199 493 LGSNELSSFIPSTFWNL-------NNILSFDFSSNSLNGSLPLDIG--NMKVVVEINLSRNYLTGDIPTTIGGLTNLQLL 563 (902)
Q Consensus 493 L~~N~l~~~~~~~~~~l-------~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 563 (902)
|++|+|+.+.+..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|
T Consensus 704 Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L 781 (876)
T 4ecn_A 704 LSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781 (876)
T ss_dssp CCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEE
T ss_pred CCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEE
Confidence 99999996544444433 39999999999999 6788887 99999999999999997 79999999999999
Q ss_pred EccC------cccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 564 SLEN------NRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 564 ~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+.
T Consensus 782 ~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 782 GIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp ECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG
T ss_pred ECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH
Confidence 9977 889999999999999999999999999 68898876 6999999999999865553
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.2e-47 Score=450.69 Aligned_cols=439 Identities=21% Similarity=0.229 Sum_probs=307.6
Q ss_pred CccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCcccccc
Q 046199 149 TKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLW 228 (902)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~ 228 (902)
++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|++|.|+.
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----------------- 114 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN----------------- 114 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-----------------
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-----------------
Confidence 355566666666654444556666666666666666665555556666666666666665442
Q ss_pred ccCCCccccCCCCCCEEEccCccccC-cCCCcccCCCCCceEeccCcccccCCCcCCcccCCCccc--ceeeccCccC--
Q 046199 229 QCEIPHEIGNLPNLEVLGIDENHLVG-DVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNI--ERLNLGLNNL-- 303 (902)
Q Consensus 229 ~~~lp~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L--~~L~Ls~N~l-- 303 (902)
+|.. .+++|++|+|++|++++ .+|..+.++++|++|+|++|++++. . +..+++| ++|++++|.+
T Consensus 115 ---lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~---~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 115 ---ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---D---LLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp ---ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---T---TGGGTTSCEEEEEEEESSCCC
T ss_pred ---cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---c---hhhhhhceeeEEEeecccccc
Confidence 1233 45566666666666654 2345566666666666666666531 2 2223333 6666666666
Q ss_pred CCCCCccccccc-cccEEEccCCcccCcccc-cccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCC
Q 046199 304 SGRIPGFIFNAS-KLFLLELTGNSFSGFIPD-TLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLN 381 (902)
Q Consensus 304 ~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~ 381 (902)
++..|..+..+. ....+++++|.+.+.++. .+..+++|+.|++++|+..... -...+..+..+++++.++++++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~-l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQR-LMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHH-HHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccch-HHHHHHHHhccCcceEEEecCCcCc
Confidence 556666655543 122456666666654443 3456677777777776421000 0011234556666777777666655
Q ss_pred ccc----CcccccccccccEEEeecCcccccCCccc-----CCCCCCcEEEeecceecccCC-cccccc---cccCeeec
Q 046199 382 GVL----PSSIGNLPITLEEIYLQNCKIRGNIPKEI-----GNLVNLTTLHLGNNQLSGSIP-ITVGRL---NTLQGLGL 448 (902)
Q Consensus 382 ~~~----p~~~~~l~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L 448 (902)
+.. +..+ ..+ +|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+| .++..+ .+|++|++
T Consensus 263 ~~~~~~~~~~~-~~~-~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 263 WKCSVKLFQFF-WPR-PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp HHHHHHHHHHH-TTS-SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred HHHHHHHHHhh-hcc-cccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 421 1111 123 79999999999998888877 6777777777777777 344 333333 67999999
Q ss_pred ccccccCCCC-CcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcc--cccccCCCCceEEEcCCCccCCC
Q 046199 449 ENNKLEGPIP-DDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFI--PSTFWNLNNILSFDFSSNSLNGS 525 (902)
Q Consensus 449 ~~N~l~~~~p-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~ls~N~l~~~ 525 (902)
++|.+..... ..+.+|++|++++|++++..|..|.++++|++|++++|+++++. |..|..+++|++|++++|++++.
T Consensus 339 ~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 418 (562)
T 3a79_B 339 SDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH 418 (562)
T ss_dssp ESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSC
T ss_pred cCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCc
Confidence 9999875433 67779999999999999999999999999999999999999843 56799999999999999999984
Q ss_pred Cc-cccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcc-cc
Q 046199 526 LP-LDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPIS-LE 603 (902)
Q Consensus 526 ~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~ 603 (902)
+| ..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +.
T Consensus 419 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~ 494 (562)
T 3a79_B 419 AYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFD 494 (562)
T ss_dssp CSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTT
T ss_pred cChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHh
Confidence 55 4588999999999999999988877665 79999999999999 688777799999999999999995 5655 99
Q ss_pred cccccccccccCCcceecCCC
Q 046199 604 KLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 604 ~l~~L~~L~l~~N~l~~~~p~ 624 (902)
.+++|+.|++++|+|.|.+|.
T Consensus 495 ~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 495 RLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TCTTCCCEECCSCCBCCCHHH
T ss_pred cCCCCCEEEecCCCcCCCcch
Confidence 999999999999999998885
No 23
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.8e-46 Score=445.47 Aligned_cols=509 Identities=22% Similarity=0.223 Sum_probs=416.1
Q ss_pred cEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEc
Q 046199 45 RVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDC 124 (902)
Q Consensus 45 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldl 124 (902)
.++.|||++|.|++..+.++..+++|++|||++|++++..|..|.++++|++|+|++|+|++ +|...++++++|++||+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~-l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-ECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC-CCHHHhcCCCCCCEEEC
Confidence 58999999999997666789999999999999999996556679999999999999999985 67677899999999999
Q ss_pred ccCcccCcCCcchhccCc-ccccCcCccceeeecccccCC-CCchhhccccccceeecccCcCCCCCChhhhccCccc--
Q 046199 125 NYNSLSGELPANIFRAIP-KDIGNLTKLKELYLGYNKLQG-EIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLL-- 200 (902)
Q Consensus 125 s~n~l~~~~~~~~~~~ip-~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-- 200 (902)
++|++++ +| ..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|++++..|..+..+++++
T Consensus 132 s~N~l~~---------l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~ 202 (635)
T 4g8a_A 132 VETNLAS---------LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 202 (635)
T ss_dssp TTSCCCC---------STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CCCcCCC---------CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhh
Confidence 9999985 44 468999999999999999985 4789999999999999999999988888888877654
Q ss_pred --EEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCc-CCCcccCCCCCceEeccCcccc
Q 046199 201 --ELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGD-VPNTIFNMSTLKALSLLNNTLS 277 (902)
Q Consensus 201 --~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 277 (902)
.++++.|.++.+ +........++.|++++|..... .+..+..+..++...+..+...
T Consensus 203 ~~~~~ls~n~l~~i--------------------~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~ 262 (635)
T 4g8a_A 203 NLSLDLSLNPMNFI--------------------QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 262 (635)
T ss_dssp CCEEECTTCCCCEE--------------------CTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCT
T ss_pred hhhhhcccCccccc--------------------CcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccc
Confidence 678888886632 23444445678888888876532 3445667788877776544332
Q ss_pred cCCC---cCCcccCCCcccceeeccCccCC---CCCCccccccccccEEEccCCcccCcccccccccccccEEecccccC
Q 046199 278 GSLP---SSSKNLIGLPNIERLNLGLNNLS---GRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYL 351 (902)
Q Consensus 278 ~~~p---~~~~~l~~l~~L~~L~Ls~N~l~---~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 351 (902)
.... .....+..+..+...++..+... ...+..+....+++.+++.+|.+.... .+....+|+.|++++|.+
T Consensus 263 ~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~ 340 (635)
T 4g8a_A 263 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKF 340 (635)
T ss_dssp TSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEE
T ss_pred cccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccc
Confidence 1110 11112444556666666555443 223445667788999999999887543 456678899999999998
Q ss_pred CCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCccc--ccCCcccCCCCCCcEEEeeccee
Q 046199 352 TSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIR--GNIPKEIGNLVNLTTLHLGNNQL 429 (902)
Q Consensus 352 ~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l 429 (902)
....+ ..+..|+.+++++|...... ....++ +|+.|++++|.+. +..+..+..+.+|+.++++.|.+
T Consensus 341 ~~~~~--------~~l~~L~~l~l~~n~~~~~~--~~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~ 409 (635)
T 4g8a_A 341 GQFPT--------LKLKSLKRLTFTSNKGGNAF--SEVDLP-SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGV 409 (635)
T ss_dssp SSCCC--------CBCTTCCEEEEESCCSCCBC--CCCBCT-TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSE
T ss_pred cCcCc--------ccchhhhhcccccccCCCCc--cccccc-ccccchhhccccccccccccchhhhhhhhhhhcccccc
Confidence 86544 34678889999999876533 344666 8999999999986 34566778889999999999999
Q ss_pred cccCCcccccccccCeeecccccccCCCCC----cCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCc-cCcccc
Q 046199 430 SGSIPITVGRLNTLQGLGLENNKLEGPIPD----DLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNEL-SSFIPS 504 (902)
Q Consensus 430 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~~~ 504 (902)
.. .+..+..+++|+.++++.|+.....+. .+.+++.++++.|.+.+..+..+..+++|+.|++++|++ .+..|.
T Consensus 410 ~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~ 488 (635)
T 4g8a_A 410 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 488 (635)
T ss_dssp EE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred cc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCch
Confidence 84 566788999999999999988765553 345899999999999999999999999999999999974 556888
Q ss_pred cccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccccccc-cc
Q 046199 505 TFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGAL-TS 583 (902)
Q Consensus 505 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~ 583 (902)
.|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+ ++
T Consensus 489 ~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~ 568 (635)
T 4g8a_A 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568 (635)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTT
T ss_pred hhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 68
Q ss_pred CCeEeCcCcccccc
Q 046199 584 LESLDLSVNNLSGV 597 (902)
Q Consensus 584 L~~L~Ls~N~l~~~ 597 (902)
|+.|+|++|+++-.
T Consensus 569 L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 569 LAFLNLTQNDFACT 582 (635)
T ss_dssp CCEEECTTCCBCCS
T ss_pred CCEEEeeCCCCccc
Confidence 99999999999853
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.4e-46 Score=438.79 Aligned_cols=462 Identities=21% Similarity=0.221 Sum_probs=268.3
Q ss_pred EEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEccc
Q 046199 47 TALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNY 126 (902)
Q Consensus 47 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~ 126 (902)
+.+|++++++++ +|..+. ++|++|||++|++++..|..|+++++|++|+|++|++++..|. .++++++|++||+++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFH-VFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTT-TTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHH-HhCCCCCCCEEECCC
Confidence 678888888884 777654 7888888888888865566788888888888888888754332 234455555555555
Q ss_pred CcccCcCCcchhccCcccccCcCccceeeecccccCC-CCchhhccccccceeecccCcCCCCCChhhhccCcc--cEEe
Q 046199 127 NSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQG-EIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSL--LELD 203 (902)
Q Consensus 127 n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~ 203 (902)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+
T Consensus 110 N~l~---------~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~ 175 (562)
T 3a79_B 110 NRLQ---------NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCIL 175 (562)
T ss_dssp SCCC---------EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEE
T ss_pred CcCC---------ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEE
Confidence 5554 13433 45555555555555553 2334555555555555555555431 23333333 5555
Q ss_pred eeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCC--CCceEeccCcccccCCC
Q 046199 204 FSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMS--TLKALSLLNNTLSGSLP 281 (902)
Q Consensus 204 Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 281 (902)
+++|.+. . ++..|..+..+. .+ .+++++|.+.+.++
T Consensus 176 L~~n~l~--------~---------------------------------~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~ 213 (562)
T 3a79_B 176 LDLVSYH--------I---------------------------------KGGETESLQIPNTTVL-HLVFHPNSLFSVQV 213 (562)
T ss_dssp EEESSCC--------C---------------------------------CSSSCCEEEECCEEEE-EEEECSSSCCCCCC
T ss_pred eeccccc--------c---------------------------------cccCcccccccCcceE-EEEecCccchhhhh
Confidence 5555431 0 333444333322 11 23444444443333
Q ss_pred cCCcccCCCcccceeeccCccC-----CCCCCccccccccccEEEccCCcccCccccc---ccccccccEEecccccCCC
Q 046199 282 SSSKNLIGLPNIERLNLGLNNL-----SGRIPGFIFNASKLFLLELTGNSFSGFIPDT---LVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 282 ~~~~~l~~l~~L~~L~Ls~N~l-----~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~L~~L~Ls~N~l~~ 353 (902)
... +..+++|+.|++++|+. .+. ...+..+++|+.|+++++.+++..... .....+|++|++++|.+++
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 290 (562)
T 3a79_B 214 NMS--VNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITE 290 (562)
T ss_dssp EEE--ESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECS
T ss_pred hhc--ccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeec
Confidence 221 33444444444444421 111 112333444444444444433211100 0112355555555555554
Q ss_pred CCCcccccccccCCCCCceeeeccCCCCcccC-cccccc---cccccEEEeecCcccccCCcccCCCCCCcEEEeeccee
Q 046199 354 STPELSFLSSLANSSSSKYIVLAENPLNGVLP-SSIGNL---PITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQL 429 (902)
Q Consensus 354 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 429 (902)
..|...+.....+++.|+.++++.|.+ .+| ..+..+ + +++.|++++|.+.... ....+++|++|++++|++
T Consensus 291 ~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~-~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 291 RIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEM-NIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp CCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTC-CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCC
T ss_pred cccchhhhcccccchheehhhccccee--ecChhhhhhhhccC-cceEEEccCCCccccc--CccCCCCceEEECCCCcc
Confidence 444110000013344444444444443 222 111111 2 4666666666664221 114566666666666666
Q ss_pred cccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccC-cccccccC
Q 046199 430 SGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSS-FIPSTFWN 508 (902)
Q Consensus 430 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~ 508 (902)
++..|..+..+++|++|++++|++++. + ..|..|.++++|++|++++|++++ +.+..|..
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~-~------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 426 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNF-F------------------KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAW 426 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBT-T------------------HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCC
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCc-c------------------cchhhhcCCCCCCEEECCCCcCCCccChhhhcC
Confidence 666666666666665555555555421 0 234567888888999999998888 44456888
Q ss_pred CCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccc-ccccccCCeE
Q 046199 509 LNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPES-FGALTSLESL 587 (902)
Q Consensus 509 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L 587 (902)
+++|++|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. |..+++|+.|
T Consensus 427 l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L 502 (562)
T 3a79_B 427 AESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYI 502 (562)
T ss_dssp CTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCE
T ss_pred cccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEE
Confidence 88999999999998877666554 68999999999999 678777799999999999999995 5554 9999999999
Q ss_pred eCcCccccccCC
Q 046199 588 DLSVNNLSGVIP 599 (902)
Q Consensus 588 ~Ls~N~l~~~~p 599 (902)
+|++|++++..|
T Consensus 503 ~l~~N~~~c~c~ 514 (562)
T 3a79_B 503 WLHDNPWDCTCP 514 (562)
T ss_dssp ECCSCCBCCCHH
T ss_pred EecCCCcCCCcc
Confidence 999999997655
No 25
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-44 Score=413.33 Aligned_cols=239 Identities=29% Similarity=0.328 Sum_probs=113.2
Q ss_pred cccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccc
Q 046199 316 KLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITL 395 (902)
Q Consensus 316 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 395 (902)
+|++|++++|++++ +| .+..+++|++|++++|++++.+. ..+ +|
T Consensus 174 ~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~---------~~~-------------------------~L 217 (454)
T 1jl5_A 174 SLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD---------LPL-------------------------SL 217 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC---------CCT-------------------------TC
T ss_pred cccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC---------CcC-------------------------cc
Confidence 55555555555554 33 35555666666666665554211 001 44
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcccc
Q 046199 396 EEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLS 475 (902)
Q Consensus 396 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~ 475 (902)
++|++++|.++ .+| .++.+++|++|++++|++++ +|.. .++|++|++++|++++ +|..+.+|+.|++++|+++
T Consensus 218 ~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 218 ESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFS 290 (454)
T ss_dssp CEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred cEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcccCcCCEEECcCCccC
Confidence 45555555554 333 24555555555555555553 2321 2455555555555553 4444456666666666665
Q ss_pred CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccc
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIG 555 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 555 (902)
+. |.. .++|+.|++++|+++++ +. -.++|++|++++|++++ +|.. +++|++|++++|+++ .+|.
T Consensus 291 ~l-~~~---~~~L~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~--- 354 (454)
T 1jl5_A 291 GL-SEL---PPNLYYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE--- 354 (454)
T ss_dssp EE-SCC---CTTCCEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---
T ss_pred cc-cCc---CCcCCEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---
Confidence 42 111 14566666666666652 11 11466677777777665 4433 356677777777776 3454
Q ss_pred cCCccceEEccCcccCC--CccccccccccCCeEeCcCccccccCCcccccccccccccccCCccee--cCCC
Q 046199 556 GLTNLQLLSLENNRLHG--PIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG--EIPS 624 (902)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~ 624 (902)
.+++|++|++++|++++ .+|.+++.+ +.|++.|.+|.. +++|+.|++++|++++ .+|.
T Consensus 355 ~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 355 LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---------------------------------
T ss_pred hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 35677777777777776 556555432 335555555543 3566666666666665 5553
No 26
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.5e-44 Score=390.94 Aligned_cols=289 Identities=29% Similarity=0.471 Sum_probs=234.0
Q ss_pred CCChhHHHHHHHHHhcccc----CCCCCCCCcee--eeeEEeeCCC--CcEEEEEeccCCcce--ecCcccCCCCCCCee
Q 046199 4 NINTTDQQALLALKARITA----KNWTSNTSVCS--WIGITCDVST--HRVTALNISDFGLTG--TISSQLGNLSSLQTL 73 (902)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~----~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L 73 (902)
.|+++|++||++||+++.+ ++|..+.|||. |.||+|+..+ ++|+.|+|++++++| .+|+.++.+++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 5899999999999999976 68988889998 9999998765 799999999999999 999999999999999
Q ss_pred eccc-cccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccc
Q 046199 74 DLSH-NRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLK 152 (902)
Q Consensus 74 ~Ls~-n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~ 152 (902)
+|++ |.+++.+|..++++++|++|+|++|.+++. +|..++++++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~---------------------------------~p~~~~~l~~L~ 128 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA---------------------------------IPDFLSQIKTLV 128 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEE---------------------------------CCGGGGGCTTCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCc---------------------------------CCHHHhCCCCCC
Confidence 9995 999999999999999999999999999865 566677777788
Q ss_pred eeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccC-cccEEeeeeCCCCccccccccccCCccccccccC
Q 046199 153 ELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLS-SLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCE 231 (902)
Q Consensus 153 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~ 231 (902)
+|+|++|.+++.+|..++.+++|++|+|++|++++.+|..+++++ +|++|+|++|.++ |.+|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~----------~~~~------- 191 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT----------GKIP------- 191 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEE----------EECC-------
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeee----------ccCC-------
Confidence 888888888777787788888888888888888777777777777 7788888777743 3333
Q ss_pred CCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccc
Q 046199 232 IPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFI 311 (902)
Q Consensus 232 lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l 311 (902)
..++.++ |+.|+|++|++++..|..+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+
T Consensus 192 --~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 192 --PTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK----VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp --GGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG----CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred --hHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc----ccccCCCCEEECcCCcccCcCChHH
Confidence 6666665 78888888888777777777788888888888887755543 4556777777777777777777777
Q ss_pred cccccccEEEccCCcccCcccccccccccccEEeccccc
Q 046199 312 FNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNY 350 (902)
Q Consensus 312 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 350 (902)
..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 77777777777777777777665 667777777777776
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.1e-44 Score=405.87 Aligned_cols=398 Identities=26% Similarity=0.306 Sum_probs=247.2
Q ss_pred cCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccc
Q 046199 148 LTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNL 227 (902)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~ 227 (902)
.+.|++|++++|++ |.+|++++++++|++|++++|.+.|.+|.+++++++|+.+++++|.
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~------------------- 69 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCL------------------- 69 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHH-------------------
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhh-------------------
Confidence 35566666666666 4666666666666666666666666666666666665555444432
Q ss_pred cccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCC
Q 046199 228 WQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRI 307 (902)
Q Consensus 228 ~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~ 307 (902)
..+++.|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++++|++++.
T Consensus 70 -----------~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~------~~~L~~L~l~~n~l~~l- 126 (454)
T 1jl5_A 70 -----------DRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL------PQSLKSLLVDNNNLKAL- 126 (454)
T ss_dssp -----------HHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC------CTTCCEEECCSSCCSCC-
T ss_pred -----------ccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc------cCCCcEEECCCCccCcc-
Confidence 0244555555555542 2321 2455555555555554 4432 24555666666655532
Q ss_pred CccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcc
Q 046199 308 PGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSS 387 (902)
Q Consensus 308 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~ 387 (902)
|.. .++|++|++++|++++ +| .+.++++|++|++++|++++.+. ...+|++|++++|++.+ +| .
T Consensus 127 ~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~---------~~~~L~~L~L~~n~l~~-l~-~ 190 (454)
T 1jl5_A 127 SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPD---------LPPSLEFIAAGNNQLEE-LP-E 190 (454)
T ss_dssp CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSS-CC-C
T ss_pred cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCC---------CcccccEEECcCCcCCc-Cc-c
Confidence 211 1466777777777765 44 46677777777777777765322 12467777777777776 45 4
Q ss_pred cccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeE
Q 046199 388 IGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSEL 467 (902)
Q Consensus 388 ~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L 467 (902)
+..++ +|++|++++|++++ +|... ++|++|++++|+++ .+| .++.+++|++|++++|++++ +|..+.+|+.|
T Consensus 191 ~~~l~-~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L 262 (454)
T 1jl5_A 191 LQNLP-FLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDLPPSLEAL 262 (454)
T ss_dssp CTTCT-TCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSCCTTCCEE
T ss_pred ccCCC-CCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccccccccCEE
Confidence 77777 88999999998886 44432 58999999999999 677 48999999999999999995 77777899999
Q ss_pred eccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccc-cccceeccCCccc
Q 046199 468 HVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNM-KVVVEINLSRNYL 546 (902)
Q Consensus 468 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l 546 (902)
++++|++++ +|.. .++|+.|++++|+++++ |.. .++|++|++++|++++ ++ .+ ++|++|++++|++
T Consensus 263 ~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l 329 (454)
T 1jl5_A 263 NVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKL 329 (454)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCC
T ss_pred ECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcc
Confidence 999999997 4543 37899999999999984 221 2689999999999986 22 23 5899999999999
Q ss_pred cccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccc--cCCcccccccccccccccCCcceecCCC
Q 046199 547 TGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSG--VIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 547 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
++ +|.. +++|+.|++++|+++ .+|. .+++|++|+|++|++++ .+|.++.. ++.|.+.|.+|.
T Consensus 330 ~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~ 393 (454)
T 1jl5_A 330 IE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPE 393 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------
T ss_pred cc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccc
Confidence 96 6654 589999999999999 4666 47899999999999998 67776654 346888888887
Q ss_pred CCcccccccccccCCcccC
Q 046199 625 GGSFANFSAQSFMGNDLLC 643 (902)
Q Consensus 625 ~~~~~~~~~~~~~~n~~lc 643 (902)
.+..+....+.+|+...
T Consensus 394 --~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 394 --LPQNLKQLHVETNPLRE 410 (454)
T ss_dssp -------------------
T ss_pred --ccCcCCEEECCCCcCCc
Confidence 34667777888887643
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.5e-43 Score=403.15 Aligned_cols=372 Identities=19% Similarity=0.230 Sum_probs=324.6
Q ss_pred CCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccE
Q 046199 240 PNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFL 319 (902)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 319 (902)
++|++|+|++|++++..|..+.++++|++|+|++|.+.+.++... |.++++|++|+|++|++++..|..+..+++|++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 107 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNT--FRGLSSLIILKLDYNQFLQLETGAFNGLANLEV 107 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTT--TTTCTTCCEEECTTCTTCEECTTTTTTCTTCCE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccc--ccccccCCEEeCCCCccCccChhhccCcccCCE
Confidence 689999999999998889999999999999999999986665443 788999999999999999999999999999999
Q ss_pred EEccCCcccCccccc--ccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccccc-cccc
Q 046199 320 LELTGNSFSGFIPDT--LVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLP-ITLE 396 (902)
Q Consensus 320 L~Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~~L~ 396 (902)
|+|++|++++..|.. +..+++|++|++++|++++..|. ..+.++++|++|++++|.+.+..|..+..+. .+++
T Consensus 108 L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~ 183 (455)
T 3v47_A 108 LTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA----SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFT 183 (455)
T ss_dssp EECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC----GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEE
T ss_pred EeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc----cccCCCCcccEEeCCCCcccccChhhhhcccccccc
Confidence 999999999866555 89999999999999999988762 2378899999999999999999888887762 2899
Q ss_pred EEEeecCcccccCCccc--------CCCCCCcEEEeecceecccCCcccccc---cccCeeecccccccCCCCCcCCCCC
Q 046199 397 EIYLQNCKIRGNIPKEI--------GNLVNLTTLHLGNNQLSGSIPITVGRL---NTLQGLGLENNKLEGPIPDDLCQLS 465 (902)
Q Consensus 397 ~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~L~ 465 (902)
.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+..
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------- 255 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS-------- 255 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------
Confidence 99999999997666543 366889999999999998888877665 88999999998876432
Q ss_pred eEeccCccccCCCCccccCC--CcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCC
Q 046199 466 ELHVDHNKLSGPIPACFGNL--NSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSR 543 (902)
Q Consensus 466 ~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (902)
+..+.+.+..+..+..+ ++|+.|++++|++++..|..|..+++|++|++++|++++..|..|..+++|++|+|++
T Consensus 256 ---~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 332 (455)
T 3v47_A 256 ---FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQ 332 (455)
T ss_dssp ---TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ---cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCC
Confidence 22334444444444444 6899999999999999999999999999999999999988888999999999999999
Q ss_pred ccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 544 NYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 544 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|+++|.+|
T Consensus 333 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 333 NFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99998889999999999999999999998889999999999999999999998777788999999999999999999999
Q ss_pred CCCcc
Q 046199 624 SGGSF 628 (902)
Q Consensus 624 ~~~~~ 628 (902)
....+
T Consensus 413 ~~~~l 417 (455)
T 3v47_A 413 RIDYL 417 (455)
T ss_dssp TTHHH
T ss_pred cchHH
Confidence 64443
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-42 Score=399.19 Aligned_cols=330 Identities=21% Similarity=0.282 Sum_probs=219.3
Q ss_pred cccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcc-ccc
Q 046199 235 EIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGF-IFN 313 (902)
Q Consensus 235 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-l~~ 313 (902)
.|..+++|++|+|++|++++..|..+.++++|++|+|++|++++.+|.. ..+..+++|++|+|++|++++..|.. +..
T Consensus 74 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 152 (455)
T 3v47_A 74 TFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG-NFFKPLTSLEMLVLRDNNIKKIQPASFFLN 152 (455)
T ss_dssp TTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS-STTTTCTTCCEEECCSSBCCSCCCCGGGGG
T ss_pred cccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCc-ccccCcccCCEEECCCCccCccCcccccCC
Confidence 3444445555555555554444555555555555555555554322211 11444555555555555555554543 556
Q ss_pred cccccEEEccCCcccCccccccccc--ccccEEecccccCCCCCCcccc---cccccCCCCCceeeeccCCCCcccCccc
Q 046199 314 ASKLFLLELTGNSFSGFIPDTLVNL--RNLEHLGLGYNYLTSSTPELSF---LSSLANSSSSKYIVLAENPLNGVLPSSI 388 (902)
Q Consensus 314 l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~---l~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 388 (902)
+++|++|++++|++.+..|..+..+ .+|+.|++++|.+.+..+.... ...+..++
T Consensus 153 l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~-------------------- 212 (455)
T 3v47_A 153 MRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT-------------------- 212 (455)
T ss_dssp CTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC--------------------
T ss_pred CCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc--------------------
Confidence 6666666666666666666666554 5677777777776654431100 01112233
Q ss_pred ccccccccEEEeecCcccccCCcccCCC---CCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCC
Q 046199 389 GNLPITLEEIYLQNCKIRGNIPKEIGNL---VNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLS 465 (902)
Q Consensus 389 ~~l~~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~ 465 (902)
+|++|++++|++++..|..+... ++|+.|++++|.+.+... ....+..+....+.+. ...+|+
T Consensus 213 -----~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~L~ 278 (455)
T 3v47_A 213 -----SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF-GHTNFKDPDNFTFKGL--------EASGVK 278 (455)
T ss_dssp -----EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-TCCSSCCCCTTTTGGG--------TTSCCC
T ss_pred -----eeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-chhhhccCcccccccc--------cccCce
Confidence 44444444444444444433322 556666666665543211 0111111110000000 123788
Q ss_pred eEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCcc
Q 046199 466 ELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNY 545 (902)
Q Consensus 466 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 545 (902)
.|++++|++++..|..|..+++|++|++++|++++..|..|.++++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 279 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 358 (455)
T 3v47_A 279 TCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNH 358 (455)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSC
T ss_pred EEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCc
Confidence 89999999988899999999999999999999999989999999999999999999998889999999999999999999
Q ss_pred ccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCC
Q 046199 546 LTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIP 599 (902)
Q Consensus 546 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 599 (902)
+++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 359 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 359 IRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999999999999999999998777888999999999999999998876
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-41 Score=385.01 Aligned_cols=365 Identities=20% Similarity=0.234 Sum_probs=181.5
Q ss_pred cceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCc
Q 046199 56 LTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPA 135 (902)
Q Consensus 56 l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~ 135 (902)
..+..+..++.+++|++|||++|++++ +| .++.+++|++|+|++|++++. | ++++++|++||+++|.+++
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~---~~~l~~L~~L~Ls~N~l~~---- 99 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D---LSQNTNLTYLACDSNKLTN---- 99 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSC----
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c---cccCCCCCEEECcCCCCce----
Confidence 334444566677777777777777774 45 577777777777777777652 2 3455555555555555543
Q ss_pred chhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccc
Q 046199 136 NIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMT 215 (902)
Q Consensus 136 ~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 215 (902)
+| ++++++|++|+|++|++++ +| ++.+++|++|++++|++++ +| ++++++|++|++++|...
T Consensus 100 -----~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~----- 161 (457)
T 3bz5_A 100 -----LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKI----- 161 (457)
T ss_dssp -----CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCC-----
T ss_pred -----ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcc-----
Confidence 22 4455555555555555553 33 4555555555555555553 22 444555555555554310
Q ss_pred cccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccce
Q 046199 216 NNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIER 295 (902)
Q Consensus 216 ~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 295 (902)
+.+ .++.+++|+.|++++|++++ +| +..+++|+.|++++|+
T Consensus 162 -----~~~-----------~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~-------------------- 202 (457)
T 3bz5_A 162 -----TKL-----------DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNN-------------------- 202 (457)
T ss_dssp -----CCC-----------CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSC--------------------
T ss_pred -----ccc-----------ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCc--------------------
Confidence 110 13334444444444444443 22 3444444444444444
Q ss_pred eeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeee
Q 046199 296 LNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVL 375 (902)
Q Consensus 296 L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~L 375 (902)
+++. .+..+++|++|++++|++++ +| +..+++|++|++++|++++.++ ..+++|+.|++
T Consensus 203 -------l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~--------~~l~~L~~L~l 261 (457)
T 3bz5_A 203 -------ITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV--------STLSKLTTLHC 261 (457)
T ss_dssp -------CSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC--------TTCTTCCEEEC
T ss_pred -------CCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH--------HHCCCCCEEec
Confidence 4432 13344445555555555544 22 4445555555555555544221 12233333333
Q ss_pred ccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccC
Q 046199 376 AENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEG 455 (902)
Q Consensus 376 s~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 455 (902)
++| +|+.|++++|. +.+.+| ++.+++|+.|++++|...+
T Consensus 262 ~~n---------------~L~~L~l~~n~------------------------~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 262 IQT---------------DLLEIDLTHNT------------------------QLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp TTC---------------CCSCCCCTTCT------------------------TCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred cCC---------------CCCEEECCCCc------------------------cCCccc--ccccccCCEEECCCCcccc
Confidence 322 22233333333 333333 2334444444444444444
Q ss_pred CCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccc
Q 046199 456 PIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKV 535 (902)
Q Consensus 456 ~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 535 (902)
.+|....+|+.|++++| ++|++|++++|+++++ + ++.+++|+.|++++|++++ ++.
T Consensus 301 ~l~~~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~ 356 (457)
T 3bz5_A 301 LLDCQAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSS 356 (457)
T ss_dssp EEECTTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTT
T ss_pred eeccCCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccc
Confidence 44433334444443333 4566666666666653 2 5566666666666666654 234
Q ss_pred cceeccCCccccccCccccccCCccceEEccCcccCCCccccc
Q 046199 536 VVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESF 578 (902)
Q Consensus 536 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 578 (902)
|..|++++|+++|. +.+..|+.+++++|+++|.+|..+
T Consensus 357 L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 357 VGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp GGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred cccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 55556666666654 234455556666666666665543
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.1e-40 Score=373.54 Aligned_cols=368 Identities=20% Similarity=0.197 Sum_probs=254.7
Q ss_pred ecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCcc
Q 046199 156 LGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHE 235 (902)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~ 235 (902)
.......+..+..++.+++|++|++++|.+++ +| .++.+++|++|+|++|.+++ +|
T Consensus 25 ~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~--------------------~~-- 80 (457)
T 3bz5_A 25 AAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT--------------------LD-- 80 (457)
T ss_dssp HHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC--------------------CC--
T ss_pred HHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe--------------------Ec--
Confidence 33334444455556666666666666666664 34 45666666666666666442 11
Q ss_pred ccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccc
Q 046199 236 IGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNAS 315 (902)
Q Consensus 236 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 315 (902)
++.+++|++|+|++|++++. | ++++++|++|++++|++++ +| +..+++|++|++++|++++. + ++.++
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~-----~~~l~~L~~L~l~~N~l~~l-~--l~~l~ 148 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD-----VSQNPLLTYLNCARNTLTEI-D--VSHNT 148 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC-----CTTCTTCCEEECTTSCCSCC-C--CTTCT
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec-----CCCCCcCCEEECCCCcccee-c--cccCC
Confidence 45556666666666666642 2 5566666666666666654 22 45566666666666666653 2 55666
Q ss_pred cccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccc
Q 046199 316 KLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITL 395 (902)
Q Consensus 316 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 395 (902)
+|++|++++|+..+.+ .+..+++|++|++++|++++.. +..+++|++|++++|++.+. .+..++ +|
T Consensus 149 ~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~--------l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L 214 (457)
T 3bz5_A 149 QLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD--------VSQNKLLNRLNCDTNNITKL---DLNQNI-QL 214 (457)
T ss_dssp TCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--------CTTCTTCCEEECCSSCCSCC---CCTTCT-TC
T ss_pred cCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--------cccCCCCCEEECcCCcCCee---ccccCC-CC
Confidence 6666666666444333 3556666777777777666531 44566666777777766654 255666 78
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcccc
Q 046199 396 EEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLS 475 (902)
Q Consensus 396 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~ 475 (902)
++|++++|++++ +| +..+++|+.|++++|++++.. ++.+++|+.|++++|++ +.|++++|.+.
T Consensus 215 ~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L-----------~~L~l~~n~~~ 277 (457)
T 3bz5_A 215 TFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDL-----------LEIDLTHNTQL 277 (457)
T ss_dssp SEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCC-----------SCCCCTTCTTC
T ss_pred CEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCC-----------CEEECCCCccC
Confidence 888888888886 44 778888888888888888653 45677888888887654 47888888888
Q ss_pred CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccc
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIG 555 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 555 (902)
+.+| +..+++|+.|++++|++.+.+|. ...+|+.|++++| ++|++|++++|+|++. + ++
T Consensus 278 ~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~ 336 (457)
T 3bz5_A 278 IYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VS 336 (457)
T ss_dssp CEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CT
T ss_pred Cccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cc
Confidence 7776 56788999999999988777664 3455666655554 6789999999999974 3 89
Q ss_pred cCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 556 GLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
.+++|+.|++++|+|++ ++.|+.|++++|+++|. ..+..|..+++++|+++|.+|.
T Consensus 337 ~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 337 HNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp TCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred cCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 99999999999999986 35677888999999986 3567888999999999999997
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-38 Score=367.22 Aligned_cols=343 Identities=28% Similarity=0.449 Sum_probs=276.0
Q ss_pred cEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEc
Q 046199 45 RVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDC 124 (902)
Q Consensus 45 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldl 124 (902)
+++.|+++++++.. +| .+..+++|++|||++|+++ .+|+ ++++++|++|++++|++++..| ++++++|++||+
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~L 119 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTL 119 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGG---GTTCTTCCEEEC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccC-Cchh-hhccccCCEEECCCCccccChh---hcCCCCCCEEEC
Confidence 58889999988873 55 4788899999999999998 4555 8899999999999999987544 688999999999
Q ss_pred ccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEee
Q 046199 125 NYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDF 204 (902)
Q Consensus 125 s~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (902)
++|.+++ +|. ++++++|++|+|++|.+++ +| .++.+++|++|+++ |.+.+. + .+.++++|++|++
T Consensus 120 ~~n~l~~---------~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l 184 (466)
T 1o6v_A 120 FNNQITD---------IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDI 184 (466)
T ss_dssp CSSCCCC---------CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEEC
T ss_pred CCCCCCC---------ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEEC
Confidence 9998874 443 7888899999999999884 54 48889999999996 555533 3 3888999999999
Q ss_pred eeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCC
Q 046199 205 SNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSS 284 (902)
Q Consensus 205 s~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 284 (902)
++|.++.+ ..+..+++|+.|++++|++++..| ++.+++|+.|++++|++++. +
T Consensus 185 ~~n~l~~~---------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--- 237 (466)
T 1o6v_A 185 SSNKVSDI---------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G--- 237 (466)
T ss_dssp CSSCCCCC---------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G---
T ss_pred cCCcCCCC---------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-h---
Confidence 99986632 347788899999999999886655 77888999999999988742 2
Q ss_pred cccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccc
Q 046199 285 KNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSL 364 (902)
Q Consensus 285 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l 364 (902)
.+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +
T Consensus 238 -~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-------~ 305 (466)
T 1o6v_A 238 -TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-------I 305 (466)
T ss_dssp -GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-------G
T ss_pred -hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-------h
Confidence 26778889999999999886655 7788889999999999886654 7888899999999998886532 5
Q ss_pred cCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccC
Q 046199 365 ANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQ 444 (902)
Q Consensus 365 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 444 (902)
..+++|++|++++|++.+..| +..++ +|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+
T Consensus 306 ~~l~~L~~L~L~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 378 (466)
T 1o6v_A 306 SNLKNLTYLTLYFNNISDISP--VSSLT-KLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378 (466)
T ss_dssp GGCTTCSEEECCSSCCSCCGG--GGGCT-TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCC
T ss_pred cCCCCCCEEECcCCcCCCchh--hccCc-cCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCC
Confidence 678888888888888887665 66666 888888888888865 467888888888888888887766 77888888
Q ss_pred eeecccccccC
Q 046199 445 GLGLENNKLEG 455 (902)
Q Consensus 445 ~L~L~~N~l~~ 455 (902)
.|++++|++++
T Consensus 379 ~L~l~~n~~~~ 389 (466)
T 1o6v_A 379 QLGLNDQAWTN 389 (466)
T ss_dssp EEECCCEEEEC
T ss_pred EEeccCCcccC
Confidence 88888888875
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-38 Score=361.90 Aligned_cols=106 Identities=26% Similarity=0.379 Sum_probs=47.3
Q ss_pred cCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCe
Q 046199 507 WNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLES 586 (902)
Q Consensus 507 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 586 (902)
..+++|++|++++|++++..+ +..+++|++|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 357 (466)
T 1o6v_A 284 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINW 357 (466)
T ss_dssp TTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCE
T ss_pred cCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCE
Confidence 333344444444444433222 3344444444444444443332 34444455555555544432 23444555555
Q ss_pred EeCcCccccccCCcccccccccccccccCCccee
Q 046199 587 LDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 587 L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
|++++|++++..| +..+++|+.|++++|++++
T Consensus 358 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 358 LSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred EeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555554443 4445555555555555554
No 34
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=369.34 Aligned_cols=348 Identities=20% Similarity=0.199 Sum_probs=194.7
Q ss_pred CEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEc
Q 046199 243 EVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLEL 322 (902)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 322 (902)
+.++.++++++ .+|..+. ++++.|+|++|++++..|.. |.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDE---FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTT---TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhH---ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 46677777776 4555443 45666666666666544443 455555666666666555555555555555555555
Q ss_pred cCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeec
Q 046199 323 TGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQN 402 (902)
Q Consensus 323 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~ 402 (902)
++|++++..+..|.++++|++|++++|++++ ..|..+..++ +|++|++++
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-----------------------------~~~~~~~~l~-~L~~L~l~~ 137 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVI-----------------------------LLDYMFQDLY-NLKSLEVGD 137 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCE-----------------------------ECTTTTTTCT-TCCEEEECC
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCcccc-----------------------------CChhHccccc-cCCEEECCC
Confidence 5555554444445555555555555555544 3344444444 555555555
Q ss_pred CcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccc
Q 046199 403 CKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACF 482 (902)
Q Consensus 403 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~ 482 (902)
|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+. +..+..|
T Consensus 138 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~---------------------~~~~~~~ 196 (477)
T 2id5_A 138 NDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN---------------------AIRDYSF 196 (477)
T ss_dssp TTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC---------------------EECTTCS
T ss_pred CccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc---------------------EeChhhc
Confidence 5555555555555555555555555555444444444444444444444433 3333345
Q ss_pred cCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccce
Q 046199 483 GNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQL 562 (902)
Q Consensus 483 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 562 (902)
..+++|+.|++++|.+.+.+|.......+|++|++++|++++..+..+..+++|++|+|++|++++..+..|.++++|+.
T Consensus 197 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 276 (477)
T 2id5_A 197 KRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQE 276 (477)
T ss_dssp CSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCE
T ss_pred ccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCE
Confidence 55555555555555554444444444445666666666665444445556666666666666666555666666666666
Q ss_pred EEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCccc
Q 046199 563 LSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLL 642 (902)
Q Consensus 563 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 642 (902)
|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.++....+.+.....+.++...
T Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~ 356 (477)
T 2id5_A 277 IQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPT 356 (477)
T ss_dssp EECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCB
T ss_pred EECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCce
Confidence 66666666666666666666666666666666665555666666666777777766665543222222223345556666
Q ss_pred CCCCC
Q 046199 643 CGSPH 647 (902)
Q Consensus 643 c~~~~ 647 (902)
|+.|.
T Consensus 357 C~~p~ 361 (477)
T 2id5_A 357 CATPE 361 (477)
T ss_dssp EEESG
T ss_pred eCCch
Confidence 65543
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=356.26 Aligned_cols=336 Identities=21% Similarity=0.221 Sum_probs=246.5
Q ss_pred CCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccc
Q 046199 232 IPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFI 311 (902)
Q Consensus 232 lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l 311 (902)
+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|.. |.++++|++|+|++|++++..+..|
T Consensus 26 ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~ 100 (477)
T 2id5_A 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA---FNNLFNLRTLGLRSNRLKLIPLGVF 100 (477)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT---TTTCTTCCEEECCSSCCCSCCTTSS
T ss_pred CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhh---hhCCccCCEEECCCCcCCccCcccc
Confidence 445443 58999999999999888899999999999999999999877776 7889999999999999998888889
Q ss_pred cccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccc
Q 046199 312 FNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNL 391 (902)
Q Consensus 312 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 391 (902)
..+++|++|+|++|++.+..|..|..+++|++|++++|.+++..+ ..+.+++
T Consensus 101 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~----------------------- 152 (477)
T 2id5_A 101 TGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-----RAFSGLN----------------------- 152 (477)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECT-----TSSTTCT-----------------------
T ss_pred cCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeCh-----hhccCCC-----------------------
Confidence 999999999999999998888899999999999999998876544 3344444
Q ss_pred cccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccC
Q 046199 392 PITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDH 471 (902)
Q Consensus 392 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~ 471 (902)
+|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.
T Consensus 153 --~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~------------ 218 (477)
T 2id5_A 153 --SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP------------ 218 (477)
T ss_dssp --TCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT------------
T ss_pred --CCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc------------
Confidence 555555555555554455566666666666666666666566666666666666666555433332
Q ss_pred ccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCc
Q 046199 472 NKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIP 551 (902)
Q Consensus 472 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 551 (902)
.+....+|+.|++++|+++++.+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..|
T Consensus 219 ---------~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (477)
T 2id5_A 219 ---------NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289 (477)
T ss_dssp ---------TTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT
T ss_pred ---------ccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH
Confidence 22222356666666666665544556666666666666666666556666777777777777777777778
Q ss_pred cccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 552 TTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 552 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++...-+. ..-...+..+++.++...|..|.
T Consensus 290 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 290 YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp TTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESG
T ss_pred HHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCch
Confidence 8888888888888888888877777788888888888888888754332 11122344566777777777775
No 36
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.1e-37 Score=333.09 Aligned_cols=170 Identities=29% Similarity=0.372 Sum_probs=156.2
Q ss_pred ccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEcc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEYM 804 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (902)
+.|++.+.||+|+||+||+|++.. |+.||||+++.......+.+.+|+++++.++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 569999999999999999999864 9999999998766666778999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcccee
Q 046199 805 ANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMRT 884 (902)
Q Consensus 805 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 884 (902)
+||+|.+++.. ..+++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+........
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999999865 35899999999999999999999 99999999999999999999999999999998876655566
Q ss_pred cccccccccccccccc
Q 046199 885 QTLGTIGYMAPGLWVV 900 (902)
Q Consensus 885 ~~~gt~~y~APE~l~~ 900 (902)
+.+||+.|||||++..
T Consensus 229 ~~~GTp~YmAPEvl~~ 244 (346)
T 4fih_A 229 SLVGTPYWMAPELISR 244 (346)
T ss_dssp CCCSCGGGCCHHHHTT
T ss_pred ccccCcCcCCHHHHCC
Confidence 6899999999999854
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-36 Score=339.69 Aligned_cols=337 Identities=21% Similarity=0.213 Sum_probs=234.3
Q ss_pred CCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccc
Q 046199 262 NMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNL 341 (902)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 341 (902)
.+++++.|++++|.++ .+|..+ +..+++|++|++++|.+++..+..|..+++|++|+|++|++.+..|..|..+++|
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~--~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 119 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAAL--LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHH--HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred ccCCceEEEecCCchh-hCChhH--hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC
Confidence 3566666666666665 333322 4455666666666666665555556666666666666666665555555556666
Q ss_pred cEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcE
Q 046199 342 EHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTT 421 (902)
Q Consensus 342 ~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 421 (902)
++|++++|+++..++ ..+..++ +|++|++++|.+++..|..|..+++|++
T Consensus 120 ~~L~L~~n~l~~l~~-----------------------------~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 169 (390)
T 3o6n_A 120 TVLVLERNDLSSLPR-----------------------------GIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQN 169 (390)
T ss_dssp CEEECCSSCCCCCCT-----------------------------TTTTTCT-TCCEEECCSSCCCBCCTTTTSSCTTCCE
T ss_pred CEEECCCCccCcCCH-----------------------------HHhcCCC-CCcEEECCCCccCccChhhccCCCCCCE
Confidence 666666655554332 2234444 5666666666666555666666666666
Q ss_pred EEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCc
Q 046199 422 LHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSF 501 (902)
Q Consensus 422 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 501 (902)
|++++|++++. .+..+++|+.|++++|.+++. ....+|+.|++++|+++..... ..++|+.|++++|++++.
T Consensus 170 L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~--~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~ 241 (390)
T 3o6n_A 170 LQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL--AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT 241 (390)
T ss_dssp EECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE--ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC
T ss_pred EECCCCcCCcc---ccccccccceeeccccccccc--CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc
Confidence 66666666643 244556666667776666531 1123677777777777754322 246788888888888864
Q ss_pred ccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccccccc
Q 046199 502 IPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGAL 581 (902)
Q Consensus 502 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 581 (902)
..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 242 --~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l 317 (390)
T 3o6n_A 242 --AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 317 (390)
T ss_dssp --GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred --HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccccc
Confidence 578888889999999998888778888889999999999999984 5777788999999999999998 577788999
Q ss_pred ccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCCC
Q 046199 582 TSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 582 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 647 (902)
++|+.|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|+.+.
T Consensus 318 ~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 318 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTC
T ss_pred CcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccc
Confidence 9999999999999854 3 77788999999999999986543 3455666667788888887654
No 38
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-37 Score=334.13 Aligned_cols=173 Identities=27% Similarity=0.416 Sum_probs=148.4
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.++|++.+.||+|+||+||+|++.. ++.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4789999999999999999999864 9999999997653 345678999999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 802 EYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||+||+|.+++...+ ..+++..+..|+.||+.||+||| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997544 45789999999999999999999 9999999999999999999999999999998765443
Q ss_pred cceecccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~~ 900 (902)
......+||+.|||||++..
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~ 199 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICEN 199 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTT
T ss_pred ccccccCCCccccCHHHHCC
Confidence 33445689999999999864
No 39
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.6e-37 Score=326.05 Aligned_cols=172 Identities=31% Similarity=0.466 Sum_probs=153.4
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
.++|++.+.||+|+||+||+|++.. ++.||||+++... ....+.+.+|++++++++|||||++++++++++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4689999999999999999999864 8999999997542 33457899999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
||||+||+|.+++.+. +.+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999999654 46999999999999999999999 9999999999999999999999999999999875433
Q ss_pred --cceecccccccccccccccc
Q 046199 881 --SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 --~~~~~~~gt~~y~APE~l~~ 900 (902)
....+.+||+.|||||++..
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~ 208 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTE 208 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHH
T ss_pred CcccccCcccCcccCCHHHHcC
Confidence 23345789999999999853
No 40
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=335.21 Aligned_cols=171 Identities=29% Similarity=0.372 Sum_probs=156.9
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.+.|++.+.||+|+||.||+|++.. |+.||||++........+.+.+|+.+++.++|||||+++++|.+++.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 3579999999999999999999864 899999999877666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccce
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMR 883 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 883 (902)
|+||+|.+++... .+++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.......
T Consensus 230 ~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 230 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 9999999998653 5899999999999999999999 9999999999999999999999999999999887665556
Q ss_pred ecccccccccccccccc
Q 046199 884 TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 884 ~~~~gt~~y~APE~l~~ 900 (902)
...+||+.|||||++..
T Consensus 305 ~~~~GTp~YmAPEvl~~ 321 (423)
T 4fie_A 305 KSLVGTPYWMAPELISR 321 (423)
T ss_dssp CCCEECTTTCCHHHHTT
T ss_pred cccccCcCcCCHHHHCC
Confidence 66889999999999864
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-36 Score=356.12 Aligned_cols=337 Identities=21% Similarity=0.215 Sum_probs=232.9
Q ss_pred CCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccccccccc
Q 046199 263 MSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLE 342 (902)
Q Consensus 263 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 342 (902)
+++++.|++++|.+.. +|..+ +..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|+
T Consensus 50 l~~l~~l~l~~~~l~~-lp~~~--~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 126 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRK-LPAAL--LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 126 (597)
T ss_dssp GCCCSEEEESSCEESE-ECTHH--HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCceEEEeeCCCCCC-cCHHH--HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCC
Confidence 4455566666665553 23221 34455555555555555555554555555555555555555554444455555555
Q ss_pred EEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEE
Q 046199 343 HLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTL 422 (902)
Q Consensus 343 ~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 422 (902)
+|+|++|.+++ ..+..|..++ +|++|+|++|.+++..|..|..+++|++|
T Consensus 127 ~L~L~~n~l~~-----------------------------l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 127 VLVLERNDLSS-----------------------------LPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp EEECCSSCCCC-----------------------------CCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred EEEeeCCCCCC-----------------------------CCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 55555555543 3333344555 66666666666666666666666666666
Q ss_pred EeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcc
Q 046199 423 HLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFI 502 (902)
Q Consensus 423 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 502 (902)
+|++|.+++. .+..+++|+.|++++|.+++. ....+|+.|++++|.++...+.. .++|+.|+|++|.+++
T Consensus 177 ~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~l--~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~-- 246 (597)
T 3oja_B 177 QLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL--AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD-- 246 (597)
T ss_dssp ECTTSCCSBC---CGGGCTTCSEEECCSSCCSEE--ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--
T ss_pred ECcCCCCCCc---ChhhhhhhhhhhcccCccccc--cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--
Confidence 6666666643 244556666777777666532 11236777777777776544332 2578888888888886
Q ss_pred cccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccc
Q 046199 503 PSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALT 582 (902)
Q Consensus 503 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 582 (902)
+..+..+++|+.|++++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..++
T Consensus 247 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~ 324 (597)
T 3oja_B 247 TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 324 (597)
T ss_dssp CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHT
T ss_pred ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCC
Confidence 4678888899999999999988888888899999999999999985 5777888999999999999999 6888899999
Q ss_pred cCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCCCC
Q 046199 583 SLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSPHL 648 (902)
Q Consensus 583 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 648 (902)
+|+.|+|++|++++. | +..+++|+.|++++|+|+|..+. ..+..+....+.+++..|+.+..
T Consensus 325 ~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 325 RLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp TCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCE
T ss_pred CCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchh
Confidence 999999999999865 3 67788999999999999987653 34666777778899999987543
No 42
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.7e-36 Score=327.74 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=156.4
Q ss_pred CChhHHHHHHHHHhcccc------CCC----CCCCCceeeeeEEeeC--------CCCcEEEEEeccCCcceecCcccCC
Q 046199 5 INTTDQQALLALKARITA------KNW----TSNTSVCSWIGITCDV--------STHRVTALNISDFGLTGTISSQLGN 66 (902)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~------~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~~~~~l~~ 66 (902)
.-.+|++||++||+++.. .+| ....++|.|.|++|+. ...+|+.|+|++++++ .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 446899999999998853 357 4567899999999953 3456778888888777 77777777
Q ss_pred CCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCccccc
Q 046199 67 LSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIG 146 (902)
Q Consensus 67 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~ 146 (902)
+++|++|+|++|+++ .+|..++.+++|++|+|++|.++ . +|..++
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~---------------------------------lp~~l~ 147 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-A---------------------------------LPASIA 147 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-C---------------------------------CCGGGG
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-c---------------------------------CcHHHh
Confidence 777777777777777 77777777777777777777776 3 555666
Q ss_pred CcCccceeeecccccCCCCchhhcc---------ccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccc
Q 046199 147 NLTKLKELYLGYNKLQGEIPQELGN---------LAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNN 217 (902)
Q Consensus 147 ~l~~L~~L~L~~n~l~~~~p~~l~~---------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 217 (902)
++++|++|+|++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|.++
T Consensus 148 ~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~------- 219 (328)
T 4fcg_A 148 SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS------- 219 (328)
T ss_dssp GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-------
T ss_pred cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-------
Confidence 6666666666666666666665543 555555555555555 44555555555555555555533
Q ss_pred cccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceee
Q 046199 218 HFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLN 297 (902)
Q Consensus 218 ~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 297 (902)
.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|.. +..+++|++|+
T Consensus 220 -------------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~---~~~l~~L~~L~ 283 (328)
T 4fcg_A 220 -------------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD---IHRLTQLEKLD 283 (328)
T ss_dssp -------------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT---GGGCTTCCEEE
T ss_pred -------------cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchh---hhcCCCCCEEe
Confidence 12234444555555555555555455554545555555555544444444433 33334444444
Q ss_pred ccCccCCCCCCccccccccccEEEccC
Q 046199 298 LGLNNLSGRIPGFIFNASKLFLLELTG 324 (902)
Q Consensus 298 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 324 (902)
|++|.+.+.+|..++.+++|+.+++..
T Consensus 284 L~~n~~~~~iP~~l~~L~~L~~l~l~~ 310 (328)
T 4fcg_A 284 LRGCVNLSRLPSLIAQLPANCIILVPP 310 (328)
T ss_dssp CTTCTTCCCCCGGGGGSCTTCEEECCG
T ss_pred CCCCCchhhccHHHhhccCceEEeCCH
Confidence 444444444444444444444444333
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-35 Score=322.67 Aligned_cols=253 Identities=33% Similarity=0.564 Sum_probs=210.8
Q ss_pred cccEEEeecCcccc--cCCcccCCCCCCcEEEeec-ceecccCCcccccccccCeeecccccccCCCCCcC---CCCCeE
Q 046199 394 TLEEIYLQNCKIRG--NIPKEIGNLVNLTTLHLGN-NQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDL---CQLSEL 467 (902)
Q Consensus 394 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L 467 (902)
+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|..+++|++|++++|++++.+|..+ .+|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45556666666655 5555666666666666663 56655566666666666666666666655555433 366677
Q ss_pred eccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCC-CceEEEcCCCccCCCCccccccccccceeccCCccc
Q 046199 468 HVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLN-NILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYL 546 (902)
Q Consensus 468 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 546 (902)
++++|++++.+|..|.++++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |++|++++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 7777777778888899999999999999999988999999998 999999999999999999999987 99999999999
Q ss_pred cccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCC
Q 046199 547 TGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGG 626 (902)
Q Consensus 547 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 626 (902)
++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999977666 8899999999999999999999999999999999999999999999998
Q ss_pred cccccccccccCCcccCCCCCC
Q 046199 627 SFANFSAQSFMGNDLLCGSPHL 648 (902)
Q Consensus 627 ~~~~~~~~~~~~n~~lc~~~~~ 648 (902)
++.++....+.+|+++||.|+.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTSS
T ss_pred cccccChHHhcCCCCccCCCCC
Confidence 9999999999999999999875
No 44
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6e-35 Score=328.10 Aligned_cols=336 Identities=18% Similarity=0.186 Sum_probs=261.3
Q ss_pred CCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccc
Q 046199 238 NLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKL 317 (902)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 317 (902)
.++++++|++++|.++...+..+..+++|++|+|++|.+++..+.. +..+++|++|++++|.+++..|..+..+++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 119 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYA---FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTT---TTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhh---ccCCCCcCEEECCCCCCCcCCHHHhcCCCCC
Confidence 4689999999999998544445788999999999999999765555 7889999999999999999999999999999
Q ss_pred cEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccE
Q 046199 318 FLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEE 397 (902)
Q Consensus 318 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 397 (902)
++|+|++|+++...+..|..+++|++|++++|.+++..+ ..+..+++|++|++++|++.+.. +..++ +|+.
T Consensus 120 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~---~~~l~-~L~~ 190 (390)
T 3o6n_A 120 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED-----DTFQATTSLQNLQLSSNRLTHVD---LSLIP-SLFH 190 (390)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT-----TTTSSCTTCCEEECCSSCCSBCC---GGGCT-TCSE
T ss_pred CEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccCh-----hhccCCCCCCEEECCCCcCCccc---ccccc-ccce
Confidence 999999999997666667999999999999999987766 55666777777777777666431 23333 5555
Q ss_pred EEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCC
Q 046199 398 IYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGP 477 (902)
Q Consensus 398 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~ 477 (902)
|++++|.+++. ...++|+ +|++++|.+.........+|+.|++++|++++.
T Consensus 191 L~l~~n~l~~~-----~~~~~L~------------------------~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~ 241 (390)
T 3o6n_A 191 ANVSYNLLSTL-----AIPIAVE------------------------ELDASHNSINVVRGPVNVELTILKLQHNNLTDT 241 (390)
T ss_dssp EECCSSCCSEE-----ECCSSCS------------------------EEECCSSCCCEEECCCCSSCCEEECCSSCCCCC
T ss_pred eeccccccccc-----CCCCcce------------------------EEECCCCeeeeccccccccccEEECCCCCCccc
Confidence 55555555432 1223444 444554444422222234677777777777754
Q ss_pred CCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccC
Q 046199 478 IPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGL 557 (902)
Q Consensus 478 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 557 (902)
..+..+++|++|++++|++++..|..|..+++|++|++++|++++ +|..+..+++|++|++++|+++ .+|..+..+
T Consensus 242 --~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l 317 (390)
T 3o6n_A 242 --AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 317 (390)
T ss_dssp --GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred --HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccccc
Confidence 468889999999999999999889999999999999999999985 6777788999999999999999 678889999
Q ss_pred CccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 558 TNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 558 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
++|+.|+|++|++++. | +..+++|+.|++++|+++..-... -+..+....+.++...+..|
T Consensus 318 ~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~--~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 318 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRA--LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHH--HTTTCCTTTBCCCCSCCCTT
T ss_pred CcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHHH--HHHHHHhhcccccCceeccc
Confidence 9999999999999854 3 778899999999999998753322 23445555666666655544
No 45
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.9e-36 Score=321.79 Aligned_cols=175 Identities=29% Similarity=0.490 Sum_probs=152.0
Q ss_pred hhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
+..++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|++.+++.
T Consensus 10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 34578999999999999999999874 367899999987766677889999999999999999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhC------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc
Q 046199 797 KALVLEYMANGSLEKCLYSS------------NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV 864 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (902)
.|+|||||++|+|.++++.. ...+++.++..++.||+.||+||| +++||||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCc
Confidence 99999999999999999753 246899999999999999999999 999999999999999999999
Q ss_pred EEEEeecCceecCCCcccee--cccccccccccccccc
Q 046199 865 AHLSDFGIAKLLNGEESMRT--QTLGTIGYMAPGLWVV 900 (902)
Q Consensus 865 ~kL~DFG~a~~~~~~~~~~~--~~~gt~~y~APE~l~~ 900 (902)
+||+|||+|+.......... ...||+.|||||++..
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~ 204 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 204 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcC
Confidence 99999999987654433222 2469999999999853
No 46
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-35 Score=347.24 Aligned_cols=345 Identities=20% Similarity=0.233 Sum_probs=184.0
Q ss_pred CCCCCCCCcee----eeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCcc-ccCCCcceEE
Q 046199 23 KNWTSNTSVCS----WIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSS-IFSISTLKIL 97 (902)
Q Consensus 23 ~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L 97 (902)
++|.++.+||. |.++.|+. ++ +....+.. .+..-..+++++.|++++|.+. .+|+. +..+++|++|
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~---~i---~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L 80 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDV---HI---DMQTQDVY--FGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELL 80 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSC---EE---CSSCCCCE--ESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEE
T ss_pred cCCCCCCcCcccCcCceeEecCc---ee---cccccccc--cCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEE
Confidence 78988878874 66665542 11 11111111 1111123556667777777665 34443 4556666666
Q ss_pred EecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccce
Q 046199 98 ILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEW 177 (902)
Q Consensus 98 ~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (902)
+|++|.+++. .|..++.+++|++|+|++|.+++..|..|+.+++|++
T Consensus 81 ~L~~n~l~~~---------------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 81 NLNDLQIEEI---------------------------------DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp ECTTSCCCEE---------------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ECCCCCCCCC---------------------------------ChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 6666666542 2335555566666666666666545555566666666
Q ss_pred eecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCC
Q 046199 178 LSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVP 257 (902)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p 257 (902)
|+|++|.+++..+..|+++++|++|+|++|.++. .. |..|+.+++|++|+|++|++++.
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~----------~~---------~~~~~~l~~L~~L~L~~N~l~~~-- 186 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER----------IE---------DDTFQATTSLQNLQLSSNRLTHV-- 186 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB----------CC---------TTTTTTCTTCCEEECTTSCCSBC--
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC----------CC---------hhhhhcCCcCcEEECcCCCCCCc--
Confidence 6666666653333334555555555555555331 11 23445555555555555555432
Q ss_pred CcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccc
Q 046199 258 NTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVN 337 (902)
Q Consensus 258 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 337 (902)
.+..+++|+.|++++|.+++ +...++|+.|++++|.+....+. +
T Consensus 187 -~~~~l~~L~~L~l~~n~l~~--------------------------------l~~~~~L~~L~ls~n~l~~~~~~-~-- 230 (597)
T 3oja_B 187 -DLSLIPSLFHANVSYNLLST--------------------------------LAIPIAVEELDASHNSINVVRGP-V-- 230 (597)
T ss_dssp -CGGGCTTCSEEECCSSCCSE--------------------------------EECCTTCSEEECCSSCCCEEECS-C--
T ss_pred -ChhhhhhhhhhhcccCcccc--------------------------------ccCCchhheeeccCCcccccccc-c--
Confidence 13334444555555444432 11223344444444444422211 1
Q ss_pred cccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCC
Q 046199 338 LRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLV 417 (902)
Q Consensus 338 l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~ 417 (902)
.++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|..+..++ +|+.|+|++|.+++ +|..+..++
T Consensus 231 ~~~L~~L~L~~n~l~~~-------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~-l~~~~~~l~ 301 (597)
T 3oja_B 231 NVELTILKLQHNNLTDT-------AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ-RLERLYISNNRLVA-LNLYGQPIP 301 (597)
T ss_dssp CSCCCEEECCSSCCCCC-------GGGGGCTTCSEEECCSSCCCEEESGGGTTCS-SCCEEECTTSCCCE-EECSSSCCT
T ss_pred CCCCCEEECCCCCCCCC-------hhhccCCCCCEEECCCCccCCCCHHHhcCcc-CCCEEECCCCCCCC-CCcccccCC
Confidence 13455555555555532 2344445555555555555555555566665 66666666666664 345556667
Q ss_pred CCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCC
Q 046199 418 NLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNE 497 (902)
Q Consensus 418 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 497 (902)
+|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.. +..+++|+.|++++|.
T Consensus 302 ~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~------------------------~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 302 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK------------------------LSTHHTLKNLTLSHND 356 (597)
T ss_dssp TCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC------------------------CCTTCCCSEEECCSSC
T ss_pred CCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC------------------------hhhcCCCCEEEeeCCC
Confidence 7777777777777 45666666666666666666665322 3445666667777776
Q ss_pred ccC
Q 046199 498 LSS 500 (902)
Q Consensus 498 l~~ 500 (902)
+.+
T Consensus 357 ~~~ 359 (597)
T 3oja_B 357 WDC 359 (597)
T ss_dssp EEH
T ss_pred CCC
Confidence 654
No 47
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-35 Score=311.69 Aligned_cols=169 Identities=23% Similarity=0.432 Sum_probs=136.8
Q ss_pred ccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
++|++.+.||+|+||+||+|++. +++.||+|+++... ....+++.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999985 48999999997542 234567899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+ +|+|.+++.+. ..+++..+..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 67999998664 46999999999999999999999 9999999999999999999999999999998765433
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
...+.+||+.|||||++..
T Consensus 167 ~~~~~~GT~~Y~APE~~~~ 185 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISG 185 (275)
T ss_dssp --------CTTSCHHHHSS
T ss_pred ccCCeeECcccCChhhhcC
Confidence 3344789999999999854
No 48
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.6e-36 Score=321.12 Aligned_cols=172 Identities=28% Similarity=0.351 Sum_probs=144.5
Q ss_pred cccccccCeecccceeeEEEEEeC----CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
.++|++.+.||+|+||+||+|++. .++.||+|+++... .....++.+|++++++++|||||++++++.+++..|
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 368999999999999999999873 36889999997542 223457889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+|||||+||+|.+++.+. +.+++..+..++.||+.||+||| ++||+||||||+|||++++|.+||+|||+|+....
T Consensus 103 ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999999654 46999999999999999999999 99999999999999999999999999999987665
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
......+.+||+.|||||++..
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~ 200 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNR 200 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHT
T ss_pred CCccccccccCcccCCHHHhcc
Confidence 5555556789999999999853
No 49
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=321.31 Aligned_cols=174 Identities=28% Similarity=0.458 Sum_probs=145.8
Q ss_pred hcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
..++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 4467888999999999999999864 3788999999877666778899999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC
Q 046199 798 ALVLEYMANGSLEKCLYSSN--------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM 863 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (902)
|+|||||++|+|.++++... ..+++.++..|+.||+.||+||| +++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCC
Confidence 99999999999999987532 35899999999999999999999 99999999999999999999
Q ss_pred cEEEEeecCceecCCCccc--eecccccccccccccccc
Q 046199 864 VAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 864 ~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~~ 900 (902)
.+||+|||+|+........ .....||+.|||||++..
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~ 234 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY 234 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTT
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcC
Confidence 9999999999876543322 233679999999998864
No 50
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=317.30 Aligned_cols=173 Identities=28% Similarity=0.494 Sum_probs=147.4
Q ss_pred HHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
|++..+++++.+.||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.+ +..|
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 4566788999999999999999999874 369999987543 3456789999999999999999999998865 5689
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+|||||+||+|.++++.....+++..+..|+.||+.||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999999877778999999999999999999999 99999999999999999999999999999987643
Q ss_pred Ccc--ceeccccccccccccccc
Q 046199 879 EES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~--~~~~~~gt~~y~APE~l~ 899 (902)
... .....+||+.|||||++.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~ 207 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIR 207 (307)
T ss_dssp ---------CCCCTTSCCHHHHH
T ss_pred CCcceeecccccCCCccCHHHhh
Confidence 222 233468999999999985
No 51
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-35 Score=318.87 Aligned_cols=168 Identities=26% Similarity=0.337 Sum_probs=145.0
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..+.|++.+.||+|+||.||+|++.. |+.||||+++... ...+|+.+++.++|||||++++++.+++..|+|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 34678899999999999999999865 8999999997542 22479999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC-cEEEEeecCceecCCCcc
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM-VAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL~DFG~a~~~~~~~~ 881 (902)
||+||+|.+++++. +.+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+.+.....
T Consensus 131 y~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred ccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999999764 46999999999999999999999 99999999999999999988 699999999998754332
Q ss_pred c-----eecccccccccccccccc
Q 046199 882 M-----RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~-----~~~~~gt~~y~APE~l~~ 900 (902)
. ....+||+.|||||++..
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~ 230 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMG 230 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTT
T ss_pred ccceecCCccccCccccCHHHHCC
Confidence 1 122579999999999864
No 52
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-35 Score=308.37 Aligned_cols=166 Identities=30% Similarity=0.435 Sum_probs=143.7
Q ss_pred ccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec----CCeeEEE
Q 046199 728 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNFKALV 800 (902)
Q Consensus 728 y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 800 (902)
|++.+.||+|+||+||+|++.. ++.||+|++.... ....+++.+|++++++++|||||+++++|.+ ++.+|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4677889999999999999865 8899999997543 3445789999999999999999999999864 3568999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcC-CCcEEEEeecCceecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLDD-DMVAHLSDFGIAKLLN 877 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~-~~~~kL~DFG~a~~~~ 877 (902)
||||+||+|.+++.+. ..+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999654 46899999999999999999999 888 999999999999974 7899999999998643
Q ss_pred CCccceeccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~ 899 (902)
. ....+.+||+.|||||++.
T Consensus 184 ~--~~~~~~~GTp~YmAPE~~~ 203 (290)
T 3fpq_A 184 A--SFAKAVIGTPEFMAPEMYE 203 (290)
T ss_dssp T--TSBEESCSSCCCCCGGGGG
T ss_pred C--CccCCcccCccccCHHHcC
Confidence 2 2334578999999999874
No 53
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.8e-35 Score=313.75 Aligned_cols=174 Identities=24% Similarity=0.390 Sum_probs=148.9
Q ss_pred hcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
..+++++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|++.+++.
T Consensus 24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 3456788899999999999999863 36789999997543 3345789999999999999999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC
Q 046199 797 KALVLEYMANGSLEKCLYSSN---------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD 861 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (902)
.++|||||++|+|.+++.... ..+++..+.+++.||+.||+||| +++||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECC
Confidence 999999999999999996532 35889999999999999999999 999999999999999999
Q ss_pred CCcEEEEeecCceecCCCcc--ceecccccccccccccccc
Q 046199 862 DMVAHLSDFGIAKLLNGEES--MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 862 ~~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~APE~l~~ 900 (902)
++.+||+|||+|+....... .....+||+.|||||++..
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~ 221 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY 221 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhC
Confidence 99999999999987644332 2233679999999998753
No 54
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-33 Score=309.85 Aligned_cols=307 Identities=24% Similarity=0.366 Sum_probs=207.9
Q ss_pred ccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccc
Q 046199 260 IFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLR 339 (902)
Q Consensus 260 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 339 (902)
+..+++|+.|++++|.+.. +|. +..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~~----~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~ 110 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQG----IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLT 110 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CTT----GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred chhcccccEEEEeCCcccc-chh----hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCC
Confidence 4567788888888888763 332 5667778888888887775443 67777777777777777753 3577777
Q ss_pred cccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCC
Q 046199 340 NLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNL 419 (902)
Q Consensus 340 ~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 419 (902)
+|++|++++|.+++.. .+..+++|++|++++|.....++. +..++ +|++|++++|.+.+..+ +..+++|
T Consensus 111 ~L~~L~l~~n~i~~~~-------~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~-~L~~L~l~~~~~~~~~~--~~~l~~L 179 (347)
T 4fmz_A 111 NLRELYLNEDNISDIS-------PLANLTKMYSLNLGANHNLSDLSP-LSNMT-GLNYLTVTESKVKDVTP--IANLTDL 179 (347)
T ss_dssp TCSEEECTTSCCCCCG-------GGTTCTTCCEEECTTCTTCCCCGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTC
T ss_pred cCCEEECcCCcccCch-------hhccCCceeEEECCCCCCcccccc-hhhCC-CCcEEEecCCCcCCchh--hccCCCC
Confidence 7777777777776432 245555566666666544332222 44444 44455555444443222 4444444
Q ss_pred cEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCcc
Q 046199 420 TTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELS 499 (902)
Q Consensus 420 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 499 (902)
++|++++|.+.+..+ +..++ +|+.|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 180 ~~L~l~~n~l~~~~~--~~~l~---------------------~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP--LASLT---------------------SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp SEEECTTSCCCCCGG--GGGCT---------------------TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred CEEEccCCccccccc--ccCCC---------------------ccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 444444444442211 33333 55666666666655443 677788888888888888
Q ss_pred CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccccc
Q 046199 500 SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFG 579 (902)
Q Consensus 500 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 579 (902)
+..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..|+
T Consensus 235 ~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 235 DLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 7544 77888888888888888753 4577888888888888888854 4588888999999999998888888888
Q ss_pred ccccCCeEeCcCccccccCCcccccccccccccccCCcce
Q 046199 580 ALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLE 619 (902)
Q Consensus 580 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 619 (902)
.+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 88999999999999887666 788888999999998875
No 55
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.5e-35 Score=310.72 Aligned_cols=172 Identities=26% Similarity=0.402 Sum_probs=138.1
Q ss_pred ccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCccceeeeeecCC--------
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGN-------- 795 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 795 (902)
++|++.+.||+|+||+||+|++. +++.||||+++.... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46999999999999999999986 489999999976543 34578899999999999999999999986543
Q ss_pred ----eeEEEEEccCCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEe
Q 046199 796 ----FKALVLEYMANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSD 869 (902)
Q Consensus 796 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (902)
+.|+|||||+||+|.+++..... ..++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999975432 2456678899999999999999 99999999999999999999999999
Q ss_pred ecCceecCCCccc------------eecccccccccccccccc
Q 046199 870 FGIAKLLNGEESM------------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 870 FG~a~~~~~~~~~------------~~~~~gt~~y~APE~l~~ 900 (902)
||+|+........ .++.+||+.|||||++..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~ 204 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTT
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcC
Confidence 9999876543221 123579999999999864
No 56
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.3e-33 Score=309.98 Aligned_cols=308 Identities=26% Similarity=0.388 Sum_probs=257.9
Q ss_pred cccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcccccc
Q 046199 235 EIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNA 314 (902)
Q Consensus 235 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l 314 (902)
.+..+++|+.|++++|.++ .+| .+..+++|++|++++|++++. |. +..+++|++|++++|.++.. + .+..+
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~----~~~l~~L~~L~L~~n~i~~~-~-~~~~l 109 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP----LSNLVKLTNLYIGTNKITDI-S-ALQNL 109 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG----GTTCTTCCEEECCSSCCCCC-G-GGTTC
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh----hhcCCcCCEEEccCCcccCc-h-HHcCC
Confidence 3557889999999999998 455 488999999999999999843 32 77899999999999999863 3 58899
Q ss_pred ccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccccccc
Q 046199 315 SKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPIT 394 (902)
Q Consensus 315 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~ 394 (902)
++|++|++++|++.+..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..++ +
T Consensus 110 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~------~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~-~ 178 (347)
T 4fmz_A 110 TNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL------SPLSNMTGLNYLTVTESKVKDVTP--IANLT-D 178 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC------GGGTTCTTCCEEECCSSCCCCCGG--GGGCT-T
T ss_pred CcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc------cchhhCCCCcEEEecCCCcCCchh--hccCC-C
Confidence 999999999999996544 889999999999999766544 347899999999999999986654 77777 9
Q ss_pred ccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccc
Q 046199 395 LEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKL 474 (902)
Q Consensus 395 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l 474 (902)
|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|+++
T Consensus 179 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~-------------------- 234 (347)
T 4fmz_A 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT-------------------- 234 (347)
T ss_dssp CSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC--------------------
T ss_pred CCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC--------------------
Confidence 9999999999996544 8899999999999999996544 677777777777777665
Q ss_pred cCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCcccc
Q 046199 475 SGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTI 554 (902)
Q Consensus 475 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 554 (902)
+..+ +..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..|..|
T Consensus 235 -~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 235 -DLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp -CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred -CCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 2222 77788888888888888874 4688888999999999988864 457888999999999999998889999
Q ss_pred ccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc
Q 046199 555 GGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS 595 (902)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 595 (902)
+.+++|+.|++++|++++..| +..+++|+.||+++|+|+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999997766 889999999999999886
No 57
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8.8e-33 Score=303.18 Aligned_cols=292 Identities=22% Similarity=0.282 Sum_probs=176.6
Q ss_pred CCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEE
Q 046199 265 TLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHL 344 (902)
Q Consensus 265 ~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 344 (902)
+++.+++++|.++ .+|..+ .++|++|++++|.+++..|..+..+++|++|+|++|++++..|..|..+++|++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~-----~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI-----SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC-----CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred cCCEEECCCCCcc-ccCCCC-----CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 4566666666665 445432 1456666666666665556666666777777777777766666667777777777
Q ss_pred ecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEe
Q 046199 345 GLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHL 424 (902)
Q Consensus 345 ~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 424 (902)
++++|+++..+ ..+. + +|++|++++|++++..+..|..+++|++|++
T Consensus 108 ~L~~n~l~~l~------------------------------~~~~--~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 154 (332)
T 2ft3_A 108 YISKNHLVEIP------------------------------PNLP--S-SLVELRIHDNRIRKVPKGVFSGLRNMNCIEM 154 (332)
T ss_dssp ECCSSCCCSCC------------------------------SSCC--T-TCCEEECCSSCCCCCCSGGGSSCSSCCEEEC
T ss_pred ECCCCcCCccC------------------------------cccc--c-cCCEEECCCCccCccCHhHhCCCccCCEEEC
Confidence 77776665322 2222 2 7788888888888776777888888888888
Q ss_pred ecceec--ccCCcccccccccCeeecccccccCCCCCcC-CCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCc
Q 046199 425 GNNQLS--GSIPITVGRLNTLQGLGLENNKLEGPIPDDL-CQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSF 501 (902)
Q Consensus 425 ~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 501 (902)
++|.++ +..|..+..+ +|++|++++|++++ +|..+ .+|++|++++|++++..+..|.++++|+.|++++|++++.
T Consensus 155 ~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 155 GGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp CSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred CCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 888886 3667777777 88888888888874 44433 2666666666666666556666666666666666666665
Q ss_pred ccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccccccc
Q 046199 502 IPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGAL 581 (902)
Q Consensus 502 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 581 (902)
.+..|..+++|++|++++|+++ .+|..+..+++|++|++++|+|++..+..|..... -...
T Consensus 233 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~ 293 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKR 293 (332)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSS
T ss_pred ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccc------------------cccc
Confidence 5555555566666666555555 34444444555555555555554443333332100 0002
Q ss_pred ccCCeEeCcCcccc--ccCCcccccccccccccccCC
Q 046199 582 TSLESLDLSVNNLS--GVIPISLEKLVYLKDLNLSFN 616 (902)
Q Consensus 582 ~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~l~~N 616 (902)
++|+.|++++|.+. +..|..+..+++|+.+++++|
T Consensus 294 ~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred ccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 34555555555554 444555555555555555555
No 58
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-32 Score=302.09 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=150.1
Q ss_pred cccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccC
Q 046199 142 PKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTG 221 (902)
Q Consensus 142 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g 221 (902)
|..++++++|++|+|++|++++..|..++.+++|++|+|++|+++ .+|..+. ++|++|++++|.++.
T Consensus 71 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~---------- 137 (332)
T 2ft3_A 71 KDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRK---------- 137 (332)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCC----------
T ss_pred HhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCc----------
Confidence 445666667777777777776555666777777777777777766 5555444 566667766666542
Q ss_pred CccccccccCCCccccCCCCCCEEEccCcccc--CcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeecc
Q 046199 222 SIPRNLWQCEIPHEIGNLPNLEVLGIDENHLV--GDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLG 299 (902)
Q Consensus 222 ~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls 299 (902)
+| +..++.+++|+.|++++|+++ +..|..+..+ +|+.|++++|++++ +|..+ .++|++|+++
T Consensus 138 -~~--------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~-----~~~L~~L~l~ 201 (332)
T 2ft3_A 138 -VP--------KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDL-----PETLNELHLD 201 (332)
T ss_dssp -CC--------SGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSS-----CSSCSCCBCC
T ss_pred -cC--------HhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccc-----cCCCCEEECC
Confidence 11 234566666666666666664 2455555555 66666666666653 44331 1455566666
Q ss_pred CccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCC
Q 046199 300 LNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENP 379 (902)
Q Consensus 300 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~ 379 (902)
+|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|+++
T Consensus 202 ~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------------- 254 (332)
T 2ft3_A 202 HNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS--------------------------- 254 (332)
T ss_dssp SSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC---------------------------
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe---------------------------
Confidence 66665555555555555555555555555554445555555555555555554
Q ss_pred CCcccCcccccccccccEEEeecCcccccCCcccCC------CCCCcEEEeecceec--ccCCcccccccccCeeecccc
Q 046199 380 LNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGN------LVNLTTLHLGNNQLS--GSIPITVGRLNTLQGLGLENN 451 (902)
Q Consensus 380 l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N 451 (902)
.+|..+..++ +|++|++++|+|++..+..|+. ...|+.|++++|.+. +..|.+|..+++|+.+++++|
T Consensus 255 ---~lp~~l~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 255 ---RVPAGLPDLK-LLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp ---BCCTTGGGCT-TCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred ---ecChhhhcCc-cCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 3444455555 6666666666666555555544 356778888888776 566777778888888888777
Q ss_pred c
Q 046199 452 K 452 (902)
Q Consensus 452 ~ 452 (902)
+
T Consensus 331 ~ 331 (332)
T 2ft3_A 331 K 331 (332)
T ss_dssp -
T ss_pred c
Confidence 4
No 59
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-33 Score=303.30 Aligned_cols=168 Identities=27% Similarity=0.411 Sum_probs=138.9
Q ss_pred cccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC----eeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN----FKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 800 (902)
.++|.+.+.||+|+||+||+|++ +|+.||||+++.... .....+.|+..+.+++|||||++++++.+++ ..|+|
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 35788999999999999999998 689999999865422 1223345666667889999999999997653 67999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC--------CeEEcCCCCCCEEEcCCCcEEEEeecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN--------PVVHCDIKPSNILLDDDMVAHLSDFGI 872 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~--------~ivHrDlkp~NIll~~~~~~kL~DFG~ 872 (902)
||||++|+|.++++.. .+++..+.+++.|++.||+||| ++ +||||||||+|||++.++.+||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH---~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLH---MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---CCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999754 5889999999999999999999 55 999999999999999999999999999
Q ss_pred ceecCCCccce----eccccccccccccccc
Q 046199 873 AKLLNGEESMR----TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 873 a~~~~~~~~~~----~~~~gt~~y~APE~l~ 899 (902)
|+......... ...+||+.|||||++.
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~ 185 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHT
T ss_pred CccccCCCCceeeecccccccccccCHHHhc
Confidence 98775443321 2357999999999985
No 60
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.9e-34 Score=309.33 Aligned_cols=183 Identities=22% Similarity=0.389 Sum_probs=156.4
Q ss_pred ccCHHHHHhhcccccccCeecccceeeEEEEEeCC------CcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCC-CCccc
Q 046199 715 RFSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRH-RNLVK 786 (902)
Q Consensus 715 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~ 786 (902)
.+..++|++..++|++.+.||+|+||+||+|++.. ++.||||+++.... ...+.+.+|+++++++.| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 45677899999999999999999999999998643 46799999975543 345789999999999965 99999
Q ss_pred eeeeeec-CCeeEEEEEccCCCChHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 046199 787 IISSCSN-GNFKALVLEYMANGSLEKCLYSS---------------NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHC 850 (902)
Q Consensus 787 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHr 850 (902)
++|+|.+ ++..|+|||||++|+|.++++.. ...+++..+..++.||+.||+||| +++||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence 9999866 46789999999999999999753 234789999999999999999999 9999999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCceecCCCccc--eecccccccccccccccc
Q 046199 851 DIKPSNILLDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 851 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~~ 900 (902)
||||+|||+++++.+||+|||+|+.+...... ....+||+.|||||++..
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~ 261 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 261 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc
Confidence 99999999999999999999999876544332 233679999999998853
No 61
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.7e-32 Score=297.18 Aligned_cols=290 Identities=22% Similarity=0.295 Sum_probs=181.2
Q ss_pred CCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccccccccc
Q 046199 263 MSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLE 342 (902)
Q Consensus 263 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 342 (902)
..+++.++++++.++ .+|..+ .+++++|++++|++++..+..|..+++|++|+|++|++++..|..|..+++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~-----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDL-----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSC-----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred cCCCeEEEecCCCcc-ccCccC-----CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 346788888888877 456542 25677777777777766666677777777777777777766677777777777
Q ss_pred EEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEE
Q 046199 343 HLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTL 422 (902)
Q Consensus 343 ~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 422 (902)
+|++++|+++.. |..+. + +|++|++++|++++..+..|.++++|++|
T Consensus 104 ~L~Ls~n~l~~l------------------------------~~~~~--~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (330)
T 1xku_A 104 RLYLSKNQLKEL------------------------------PEKMP--K-TLQELRVHENEITKVRKSVFNGLNQMIVV 150 (330)
T ss_dssp EEECCSSCCSBC------------------------------CSSCC--T-TCCEEECCSSCCCBBCHHHHTTCTTCCEE
T ss_pred EEECCCCcCCcc------------------------------Chhhc--c-cccEEECCCCcccccCHhHhcCCccccEE
Confidence 777777766532 22222 2 77888888888887777778888888888
Q ss_pred Eeecceecc--cCCcccccccccCeeecccccccCCCCCcC-CCCCeEeccCccccCCCCccccCCCcCceEecCCCCcc
Q 046199 423 HLGNNQLSG--SIPITVGRLNTLQGLGLENNKLEGPIPDDL-CQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELS 499 (902)
Q Consensus 423 ~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 499 (902)
++++|++.. ..+..+..+++|++|++++|+++. +|..+ .+|++|++++|++++..|..|.++++|+.|++++|+++
T Consensus 151 ~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 151 ELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp ECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 888888853 667778888888888888888773 44332 35555555555555555555555555555555555555
Q ss_pred CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCcccccc
Q 046199 500 SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFG 579 (902)
Q Consensus 500 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 579 (902)
+..+..|..+++|++|++++|+++ .+|..+..+++|++|+|++|+|++..+..|.
T Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 230 AVDNGSLANTPHLRELHLNNNKLV-------------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTTTGGGSTTCCEEECCSSCCS-------------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred eeChhhccCCCCCCEEECCCCcCc-------------------------cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 554445555555555555555554 3444444555555555555555544444443
Q ss_pred c------cccCCeEeCcCccccc--cCCcccccccccccccccCCc
Q 046199 580 A------LTSLESLDLSVNNLSG--VIPISLEKLVYLKDLNLSFNR 617 (902)
Q Consensus 580 ~------l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~ 617 (902)
. .+.|+.|++++|.+.. ..|..+..+.+|+.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 2 2455666666666542 344556666666666666653
No 62
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.1e-32 Score=296.89 Aligned_cols=268 Identities=22% Similarity=0.284 Sum_probs=143.1
Q ss_pred ccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccc
Q 046199 150 KLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQ 229 (902)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~ 229 (902)
.|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.++.
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------------------ 114 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE------------------ 114 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB------------------
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc------------------
Confidence 44555555555553333345555555555555555554445555555555555555554431
Q ss_pred cCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCccccc--CCCcCCcccCCCcccceeeccCccCCCCC
Q 046199 230 CEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSG--SLPSSSKNLIGLPNIERLNLGLNNLSGRI 307 (902)
Q Consensus 230 ~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~ 307 (902)
+|..+. ++|+.|++++|++++..+..+.++++|+.|++++|.++. ..+.. +.++++|++|++++|.++. +
T Consensus 115 --l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~~~l~~L~~L~l~~n~l~~-l 186 (330)
T 1xku_A 115 --LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGA---FQGMKKLSYIRIADTNITT-I 186 (330)
T ss_dssp --CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTG---GGGCTTCCEEECCSSCCCS-C
T ss_pred --cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhh---ccCCCCcCEEECCCCcccc-C
Confidence 112221 345555555555554444445555555555555555532 22222 4445555555555555543 2
Q ss_pred CccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcc
Q 046199 308 PGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSS 387 (902)
Q Consensus 308 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~ 387 (902)
|..+. ++|++|++++|++++..|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++. .+|..
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN-----GSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECT-----TTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeCh-----hhccCCCCCCEEECCCCcCc-cCChh
Confidence 22221 455555555555555555555555556666666665554443 34455555555555555555 45555
Q ss_pred cccccccccEEEeecCcccccCCcccCCC------CCCcEEEeecceecc--cCCcccccccccCeeeccccc
Q 046199 388 IGNLPITLEEIYLQNCKIRGNIPKEIGNL------VNLTTLHLGNNQLSG--SIPITVGRLNTLQGLGLENNK 452 (902)
Q Consensus 388 ~~~l~~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 452 (902)
+..++ +|++|++++|+|++..+..|+.. +.++.|++++|.+.. ..|..|..+..++.++|++|+
T Consensus 259 l~~l~-~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 LADHK-YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTCS-SCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hccCC-CcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66665 67777777777776666666433 667788888888753 456677777888888887774
No 63
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=6.8e-36 Score=343.95 Aligned_cols=367 Identities=20% Similarity=0.177 Sum_probs=240.4
Q ss_pred CcEEEEEeccCCcceecCc-ccCCCCCCCeeecccccccc----CCCccccCCCcceEEEecCccccCCCCcccccCCC-
Q 046199 44 HRVTALNISDFGLTGTISS-QLGNLSSLQTLDLSHNRFSG----TIPSSIFSISTLKILILGDNQLSGSFPSFIISNTS- 117 (902)
Q Consensus 44 ~~v~~l~l~~~~l~g~~~~-~l~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~- 117 (902)
.+++.|||+++.++..... .+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+...++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3689999999998754333 37788999999999999874 56777888899999999999998755555555555
Q ss_pred ---cccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhcc-----ccccceeecccCcCCCC-
Q 046199 118 ---SLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGN-----LAELEWLSLPRSFLTGT- 188 (902)
Q Consensus 118 ---~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~n~l~~~- 188 (902)
+|++||+++|.++.. ....+|..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~----~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGA----GCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp TTCCCCEEECTTSCCBGG----GHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred CCCceeEEEccCCCCCHH----HHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 699999999988632 11236778888889999999999887555554442 45799999999988863
Q ss_pred ---CChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCcccc-CCCCCCEEEccCccccCc----CCCcc
Q 046199 189 ---IPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIG-NLPNLEVLGIDENHLVGD----VPNTI 260 (902)
Q Consensus 189 ---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~-~l~~L~~L~Ls~N~l~~~----~p~~~ 260 (902)
++..+..+++|++|+|++|.++..... .+...+. .+++|+.|+|++|++++. ++..+
T Consensus 159 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~---------------~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 223 (461)
T 1z7x_W 159 CEPLASVLRAKPDFKELTVSNNDINEAGVR---------------VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 223 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHH---------------HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCEEECcCCCcchHHHH---------------HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHH
Confidence 356667788899999998886531100 0111111 356888888888888753 56667
Q ss_pred cCCCCCceEeccCcccccCCCcCC--cccCCCcccceeeccCccCCCC----CCccccccccccEEEccCCcccCccccc
Q 046199 261 FNMSTLKALSLLNNTLSGSLPSSS--KNLIGLPNIERLNLGLNNLSGR----IPGFIFNASKLFLLELTGNSFSGFIPDT 334 (902)
Q Consensus 261 ~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 334 (902)
..+++|++|++++|++++.....+ ..+..+++|++|++++|.++.. ++..+..+++|++|+|++|.+.+..+..
T Consensus 224 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 303 (461)
T 1z7x_W 224 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 303 (461)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred HhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHH
Confidence 778888888888888764211000 0022456677777777766643 3444555666666666666665443333
Q ss_pred cccc-----ccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccC
Q 046199 335 LVNL-----RNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNI 409 (902)
Q Consensus 335 l~~l-----~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~ 409 (902)
+... ++|++|++++|.+++.... .++..+..++ +|++|++++|.+++..
T Consensus 304 l~~~l~~~~~~L~~L~L~~n~l~~~~~~-------------------------~l~~~l~~~~-~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 304 LCETLLEPGCQLESLWVKSCSFTAACCS-------------------------HFSSVLAQNR-FLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHH-------------------------HHHHHHHHCS-SCCEEECCSSBCHHHH
T ss_pred HHHHhccCCccceeeEcCCCCCchHHHH-------------------------HHHHHHhhCC-CccEEEccCCcccccc
Confidence 3322 3555555555555432100 1233344444 6666666666665544
Q ss_pred CcccCC-----CCCCcEEEeecceecc----cCCcccccccccCeeecccccccC
Q 046199 410 PKEIGN-----LVNLTTLHLGNNQLSG----SIPITVGRLNTLQGLGLENNKLEG 455 (902)
Q Consensus 410 p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 455 (902)
+..+.. .++|++|+|++|++++ .+|..+..+++|++|++++|++++
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 433332 5677777777777775 566677777777777777777653
No 64
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.5e-32 Score=305.01 Aligned_cols=171 Identities=29% Similarity=0.401 Sum_probs=146.2
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec------CC
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN------GN 795 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 795 (902)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++++.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999986 49999999997543 2345678899999999999999999998753 36
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+|||||+ |+|.+++.. .+.+++..+..+++||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 689998865 456999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCc----cceecccccccccccccccc
Q 046199 876 LNGEE----SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~----~~~~~~~gt~~y~APE~l~~ 900 (902)
+.... ....+.+||+.|||||++..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~ 236 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLS 236 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTT
T ss_pred cccCccccccccccceeChHhcCHHHhcC
Confidence 64322 22334689999999999764
No 65
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98 E-value=2.6e-32 Score=315.07 Aligned_cols=171 Identities=27% Similarity=0.354 Sum_probs=147.6
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHH---HHHHHHhCCCCCccceeeeeecCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDA---ECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
...++|++.+.||+|+||+||+|++.. |+.||||+++... ........+ ++.+++.++|||||+++++|++++
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence 345789999999999999999999865 8999999997532 112233333 456677789999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+|||||+||+|.+++.+. +.+++..+..++.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999999764 45999999999999999999999 99999999999999999999999999999998
Q ss_pred cCCCccceeccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+.... ..+.+||+.|||||++.
T Consensus 342 ~~~~~--~~t~~GTp~YmAPEvl~ 363 (689)
T 3v5w_A 342 FSKKK--PHASVGTHGYMAPEVLQ 363 (689)
T ss_dssp CSSCC--CCSCCSCGGGCCHHHHS
T ss_pred cCCCC--CCCccCCcCccCHHHHh
Confidence 75433 34478999999999985
No 66
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.7e-35 Score=340.66 Aligned_cols=378 Identities=21% Similarity=0.202 Sum_probs=233.5
Q ss_pred CcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccC----cCCCcccCCCCCceEecc
Q 046199 197 SSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVG----DVPNTIFNMSTLKALSLL 272 (902)
Q Consensus 197 ~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls 272 (902)
++|++|+|++|.++... ....+..+++|++|+|++|+++. .++..+..+++|++|+|+
T Consensus 3 ~~l~~L~Ls~~~l~~~~------------------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls 64 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDAR------------------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64 (461)
T ss_dssp EEEEEEEEESCCCCHHH------------------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECT
T ss_pred ccceehhhhhcccCchh------------------HHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCC
Confidence 46788888888765321 11336677888888888888874 346667777888888888
Q ss_pred CcccccCCCcCCcccCCCc----ccceeeccCccCCC----CCCccccccccccEEEccCCcccCcccccccc-----cc
Q 046199 273 NNTLSGSLPSSSKNLIGLP----NIERLNLGLNNLSG----RIPGFIFNASKLFLLELTGNSFSGFIPDTLVN-----LR 339 (902)
Q Consensus 273 ~N~l~~~~p~~~~~l~~l~----~L~~L~Ls~N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~ 339 (902)
+|.++...+..+ +..++ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+.. .+
T Consensus 65 ~n~l~~~~~~~l--~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 65 SNELGDVGVHCV--LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp TCCCHHHHHHHH--HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCcCChHHHHHH--HHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 888765333221 12233 57777777777763 34666667777777777777776544433322 34
Q ss_pred cccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccC-----
Q 046199 340 NLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIG----- 414 (902)
Q Consensus 340 ~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~----- 414 (902)
+|++|++++|++++.... .....+..+++ |++|++++|.++...+..+.
T Consensus 143 ~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~-------------------------L~~L~L~~n~i~~~~~~~l~~~l~~ 196 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCE-PLASVLRAKPD-------------------------FKELTVSNNDINEAGVRVLCQGLKD 196 (461)
T ss_dssp CCCEEECTTSCCBGGGHH-HHHHHHHHCTT-------------------------CCEEECCSSBCHHHHHHHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHH-HHHHHHhhCCC-------------------------CCEEECcCCCcchHHHHHHHHHHhc
Confidence 567777766666542210 00122333344 44444444444433222222
Q ss_pred CCCCCcEEEeecceeccc----CCcccccccccCeeecccccccCCC--------CCcCCCCCeEeccCccccCC----C
Q 046199 415 NLVNLTTLHLGNNQLSGS----IPITVGRLNTLQGLGLENNKLEGPI--------PDDLCQLSELHVDHNKLSGP----I 478 (902)
Q Consensus 415 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~--------p~~l~~L~~L~L~~N~l~~~----~ 478 (902)
..++|++|++++|.+++. ++..+..+++|++|++++|++++.. .....+|++|++++|++++. +
T Consensus 197 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 276 (461)
T 1z7x_W 197 SPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDL 276 (461)
T ss_dssp SCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHH
Confidence 134555555555555532 3444555556666666666554321 11234667777777776653 4
Q ss_pred CccccCCCcCceEecCCCCccCcccccccC-----CCCceEEEcCCCccCCC----CccccccccccceeccCCcccccc
Q 046199 479 PACFGNLNSLRNLSLGSNELSSFIPSTFWN-----LNNILSFDFSSNSLNGS----LPLDIGNMKVVVEINLSRNYLTGD 549 (902)
Q Consensus 479 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~ 549 (902)
+..+.++++|++|++++|++++..+..+.. .++|++|++++|.+++. ++..+..+++|++|++++|++++.
T Consensus 277 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 277 CRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 666777888888888888887654444432 36888888888888764 455566678888888888888876
Q ss_pred Ccccccc-----CCccceEEccCcccCC----CccccccccccCCeEeCcCccccccCCcccc-----cccccccccccC
Q 046199 550 IPTTIGG-----LTNLQLLSLENNRLHG----PIPESFGALTSLESLDLSVNNLSGVIPISLE-----KLVYLKDLNLSF 615 (902)
Q Consensus 550 ~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~l~~ 615 (902)
.+..+.. .++|+.|+|++|++++ .+|..+..+++|++|||++|++++.-...+. ...+|+.|++.+
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~ 436 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 436 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecc
Confidence 6665554 6788888888888885 6788888888888999988888764222221 122455666666
Q ss_pred Cccee
Q 046199 616 NRLEG 620 (902)
Q Consensus 616 N~l~~ 620 (902)
+.+..
T Consensus 437 ~~~~~ 441 (461)
T 1z7x_W 437 IYWSE 441 (461)
T ss_dssp CCCCH
T ss_pred cccCH
Confidence 55543
No 67
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.98 E-value=3e-32 Score=299.46 Aligned_cols=169 Identities=24% Similarity=0.324 Sum_probs=145.1
Q ss_pred hhcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+|+||+||+|+++ .++.||+|++.... ...++.+|+++++.+ .||||+++++++.+++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 44678999999999999999999863 36789999886543 346788999999998 699999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-CcEEEEeecCceec
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD-MVAHLSDFGIAKLL 876 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kL~DFG~a~~~ 876 (902)
|+||||++||+|.+++. .+++.++..+++|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999983 4899999999999999999999 9999999999999999876 79999999999865
Q ss_pred CCCcc----------------------------ceecccccccccccccccc
Q 046199 877 NGEES----------------------------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~----------------------------~~~~~~gt~~y~APE~l~~ 900 (902)
.+... ..+..+||+.|||||++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 220 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK 220 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence 43221 1123579999999999864
No 68
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=8.2e-32 Score=314.22 Aligned_cols=172 Identities=25% Similarity=0.374 Sum_probs=155.9
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.++|++.+.||+|+||.||+|+++. |+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 3689999999999999999999864 899999999877666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC--CcEEEEeecCceecCCCcc
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD--MVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~--~~~kL~DFG~a~~~~~~~~ 881 (902)
|+||+|.+++......+++.++..+++||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999776677999999999999999999999 9999999999999999854 8999999999998765443
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
....+||+.|||||++..
T Consensus 313 -~~~~~GT~~y~APEv~~~ 330 (573)
T 3uto_A 313 -VKVTTGTAEFAAPEVAEG 330 (573)
T ss_dssp -EEEECSSGGGCCHHHHTT
T ss_pred -eeeeEECccccCHHHhCC
Confidence 344689999999999864
No 69
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=294.51 Aligned_cols=287 Identities=21% Similarity=0.223 Sum_probs=172.9
Q ss_pred CCCCCCCCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCc
Q 046199 23 KNWTSNTSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDN 102 (902)
Q Consensus 23 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n 102 (902)
..|....++|.|.|+ |+. ++++++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|
T Consensus 21 ~~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 456666788999998 865 445555 6776655 48999999999998554557889999999999999
Q ss_pred cccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCccc-ccCcCccceeeecccccCCCCch--hhccccccceee
Q 046199 103 QLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKD-IGNLTKLKELYLGYNKLQGEIPQ--ELGNLAELEWLS 179 (902)
Q Consensus 103 ~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~-~~~l~~L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~ 179 (902)
++++..| ..++++++|++||+++|++++ +|.. ++++++|++|+|++|+++ .+|. .+..+++|++|+
T Consensus 87 ~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~---------~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 87 GINTIEE-DSFSSLGSLEHLDLSYNYLSN---------LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILR 155 (353)
T ss_dssp CCCEECT-TTTTTCTTCCEEECCSSCCSS---------CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEE
T ss_pred ccCccCH-hhcCCCCCCCEEECCCCcCCc---------CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEE
Confidence 9886433 334667777777777777653 4443 666777777777777776 4544 566777777777
Q ss_pred cccC-cCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCC
Q 046199 180 LPRS-FLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPN 258 (902)
Q Consensus 180 L~~n-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~ 258 (902)
+++| .+.+..|..|+++++|++|++++|.++. . .|..++.+++|+.|++++|+++...+.
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~----------~---------~~~~l~~l~~L~~L~l~~n~l~~~~~~ 216 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS----------Y---------EPKSLKSIQNVSHLILHMKQHILLLEI 216 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCE----------E---------CTTTTTTCSEEEEEEEECSCSTTHHHH
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCc----------c---------CHHHHhccccCCeecCCCCccccchhh
Confidence 7776 3554445667777777777777776542 1 235666677777777777776532222
Q ss_pred cccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCC----CCCccccccccccEEEccCCcccCccccc
Q 046199 259 TIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSG----RIPGFIFNASKLFLLELTGNSFSGFIPDT 334 (902)
Q Consensus 259 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 334 (902)
.+..+++|+.|++++|++++..+..+......+.++.++++++.+.+ .+|..+..+++|++|+|++|+++...+..
T Consensus 217 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~ 296 (353)
T 2z80_A 217 FVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI 296 (353)
T ss_dssp HHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT
T ss_pred hhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH
Confidence 33346677777777777765444333223334445555555555442 23444444555555555555555322222
Q ss_pred ccccccccEEecccccCCC
Q 046199 335 LVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 335 l~~l~~L~~L~Ls~N~l~~ 353 (902)
|..+++|++|++++|++.+
T Consensus 297 ~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 297 FDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp TTTCTTCCEEECCSSCBCC
T ss_pred HhcCCCCCEEEeeCCCccC
Confidence 3445555555555555444
No 70
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=1.1e-30 Score=295.07 Aligned_cols=181 Identities=24% Similarity=0.342 Sum_probs=159.9
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeee
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSC 791 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 791 (902)
..+.++....++|++.+.||+|+||+||+|++.. ++.||+|+++... ....+.+.+|+.+++.++||||+++++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3456777888999999999999999999999875 7889999997532 22345588999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
.+++..|+||||++||+|.+++......+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 9999999999999999999999876677999999999999999999999 9999999999999999999999999999
Q ss_pred CceecCCCccce-eccccccccccccccc
Q 046199 872 IAKLLNGEESMR-TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 872 ~a~~~~~~~~~~-~~~~gt~~y~APE~l~ 899 (902)
+|+......... ...+||+.|||||++.
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHh
Confidence 998775544332 3368999999999985
No 71
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=7.5e-33 Score=329.14 Aligned_cols=431 Identities=13% Similarity=0.077 Sum_probs=206.6
Q ss_pred ceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeecccccc---ccCCCcccc------------CCCcce
Q 046199 31 VCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRF---SGTIPSSIF------------SISTLK 95 (902)
Q Consensus 31 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~ 95 (902)
|++|.++.+.. . ..+.+.. .+....+..+..+++|++|+|+++.. .|.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~--~~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--R--EHVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--C--CEEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--c--cEEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45899885432 1 2222332 23333445567788899999988532 245665544 567777
Q ss_pred EEEecCccccCCCCcccccCCCc-ccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCC----Cchhhc
Q 046199 96 ILILGDNQLSGSFPSFIISNTSS-LRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGE----IPQELG 170 (902)
Q Consensus 96 ~L~ls~n~l~~~~~~~~~~~~~~-L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~----~p~~l~ 170 (902)
+|+|++|.+++..+..+...++. |++|++++|.-.. ...++..+..+++|++|+|++|.+++. ++..+.
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~------~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT------TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE------HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC------HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 77777777665433332222223 5555555554100 001222223445555555555555433 223334
Q ss_pred cccccceeecccCcCC----CCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEE
Q 046199 171 NLAELEWLSLPRSFLT----GTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLG 246 (902)
Q Consensus 171 ~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~ 246 (902)
.+++|++|+|++|.++ +.++..+.++++|++|+|++|
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~--------------------------------------- 230 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDF--------------------------------------- 230 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSC---------------------------------------
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCc---------------------------------------
Confidence 4455555555555554 122333344455555555544
Q ss_pred ccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCc
Q 046199 247 IDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNS 326 (902)
Q Consensus 247 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 326 (902)
.+.+ +|..+..+++|+.|+++.+......+.....+..+++|+.|+++++.. ..+|..+..+++|++|+|++|.
T Consensus 231 ----~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 231 ----EILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp ----BGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCC
T ss_pred ----cHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCc
Confidence 4442 334444444444444443221111111112234445555555554322 2344445555555555555555
Q ss_pred ccCccc-ccccccccccEEecccccCCCCCCcccccccccCCCCCceeeecc-----------CCCCcc-cCcccccccc
Q 046199 327 FSGFIP-DTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAE-----------NPLNGV-LPSSIGNLPI 393 (902)
Q Consensus 327 l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~-----------N~l~~~-~p~~~~~l~~ 393 (902)
+++... ..+..+++|++|+++ +.+.... .......+++|++|++++ |.++.. ++.....++
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~----l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~- 378 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETR-NVIGDRG----LEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQ- 378 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEE-GGGHHHH----HHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCT-
T ss_pred CCHHHHHHHHHhCcCCCEEecc-CccCHHH----HHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCc-
Confidence 443322 223455566666655 2222110 001123445566666662 344332 111123344
Q ss_pred cccEEEeecCcccccCCcccCC-CCCCcEEEee----cceeccc-----CCcccccccccCeeeccccc--ccCCCCC--
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGN-LVNLTTLHLG----NNQLSGS-----IPITVGRLNTLQGLGLENNK--LEGPIPD-- 459 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~--l~~~~p~-- 459 (902)
+|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|+++.+. +++..+.
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 7777777777777665555554 7778888885 5667653 33346667888888886432 4422221
Q ss_pred --cCCCCCeEeccCccccC-CCCccccCCCcCceEecCCCCccCc-ccccccCCCCceEEEcCCCccC
Q 046199 460 --DLCQLSELHVDHNKLSG-PIPACFGNLNSLRNLSLGSNELSSF-IPSTFWNLNNILSFDFSSNSLN 523 (902)
Q Consensus 460 --~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~ 523 (902)
.+.+|+.|++++|++++ .++..+.++++|++|++++|.+++. ++..+..+++|++|++++|+++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 12244444444444443 1223334445555555555554332 1222233444444444444444
No 72
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.1e-29 Score=277.40 Aligned_cols=265 Identities=21% Similarity=0.273 Sum_probs=214.4
Q ss_pred CCCC--CCCceeeeeEEeeCCCCcEEEEEeccCCccee----cCccc--CCCCCCCeeeccccccccCCCccccCCCcce
Q 046199 24 NWTS--NTSVCSWIGITCDVSTHRVTALNISDFGLTGT----ISSQL--GNLSSLQTLDLSHNRFSGTIPSSIFSISTLK 95 (902)
Q Consensus 24 ~w~~--~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~----~~~~l--~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 95 (902)
.|.. ..|+|.|.++-|...... -..+...|. ++..+ ...+.+++|+|++|+++ .+|+.++++++|+
T Consensus 34 ~~k~~~~~~~~~~~~~w~~~~~~~-----~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~ 107 (328)
T 4fcg_A 34 QWQRHYNADRNRWHSAWRQANSNN-----PQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQ 107 (328)
T ss_dssp HHHHHHHHCCTTHHHHHHHHTTTC-----TTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCS
T ss_pred HHHHhccCCchhhhhhhccccccc-----ccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCC
Confidence 4643 257899998877433221 111222221 12211 23578899999999998 8898888899999
Q ss_pred EEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhcccccc
Q 046199 96 ILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAEL 175 (902)
Q Consensus 96 ~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 175 (902)
+|+|++|.++ . +|..++.+++|++|+|++|+++ .+|..++.+++|
T Consensus 108 ~L~L~~n~l~-~---------------------------------lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L 152 (328)
T 4fcg_A 108 HMTIDAAGLM-E---------------------------------LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRL 152 (328)
T ss_dssp EEEEESSCCC-C---------------------------------CCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTC
T ss_pred EEECCCCCcc-c---------------------------------hhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCC
Confidence 9999998887 3 7788889999999999999999 899999999999
Q ss_pred ceeecccCcCCCCCChhhhc---------cCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEE
Q 046199 176 EWLSLPRSFLTGTIPSSIFN---------LSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLG 246 (902)
Q Consensus 176 ~~L~L~~n~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~ 246 (902)
++|+|++|++.+.+|..++. +++|++|+|++|.++ .+|..++++++|++|+
T Consensus 153 ~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~--------------------~lp~~l~~l~~L~~L~ 212 (328)
T 4fcg_A 153 RELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR--------------------SLPASIANLQNLKSLK 212 (328)
T ss_dssp CEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC--------------------CCCGGGGGCTTCCEEE
T ss_pred CEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC--------------------cchHhhcCCCCCCEEE
Confidence 99999999998899987765 889999999999865 3457788899999999
Q ss_pred ccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCc
Q 046199 247 IDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNS 326 (902)
Q Consensus 247 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 326 (902)
|++|+++ .+|..+..+++|++|+|++|++.+.+|.. +..+++|++|++++|.+.+.+|..+..+++|++|+|++|+
T Consensus 213 L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~---~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 213 IRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPI---FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp EESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCC---TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred ccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHH---hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCC
Confidence 9999998 46677888999999999999888888876 6778889999999988888888888888899999999988
Q ss_pred ccCcccccccccccccEEecccccCCC
Q 046199 327 FSGFIPDTLVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 327 l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 353 (902)
+.+.+|..+..+++|+.+++..+.+..
T Consensus 289 ~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 289 NLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp TCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred chhhccHHHhhccCceEEeCCHHHHHH
Confidence 888888888888888888888776654
No 73
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.3e-30 Score=279.26 Aligned_cols=253 Identities=23% Similarity=0.275 Sum_probs=140.0
Q ss_pred CCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCcc-ccCCCcceEEEecCccccCC
Q 046199 29 TSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSS-IFSISTLKILILGDNQLSGS 107 (902)
Q Consensus 29 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~ls~n~l~~~ 107 (902)
.+.|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++ .+|.. +.++++|++|+|++|.++..
T Consensus 4 ~C~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 4 RCSCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFK 67 (306)
T ss_dssp TCEEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEE
T ss_pred CCeeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcc
Confidence 45589988888643 333 4565443 68899999999998 66664 67899999999999988732
Q ss_pred --CCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCc-hhhccccccceeecccCc
Q 046199 108 --FPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIP-QELGNLAELEWLSLPRSF 184 (902)
Q Consensus 108 --~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~ 184 (902)
.|.. ..++++|++||+++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.
T Consensus 68 ~~~~~~-~~~~~~L~~L~Ls~n~i~---------~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 68 GCCSQS-DFGTTSLKYLDLSFNGVI---------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp EEEEHH-HHSCSCCCEEECCSCSEE---------EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred cCcccc-cccccccCEEECCCCccc---------cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 1111 223555555555555543 144445555555555555555553222 345555555555555555
Q ss_pred CCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccC-cCCCcccCC
Q 046199 185 LTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVG-DVPNTIFNM 263 (902)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l 263 (902)
+.+..|..+.++++|++|+|++|. +++ .+|..+..+
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~-------------------------------------------l~~~~~~~~~~~l 174 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNS-------------------------------------------FQENFLPDIFTEL 174 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCE-------------------------------------------EGGGEECSCCTTC
T ss_pred CCccchhhcccCcCCCEEECCCCc-------------------------------------------cccccchhHHhhC
Confidence 554444445555555555555554 443 234444444
Q ss_pred CCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccccc-cccc
Q 046199 264 STLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNL-RNLE 342 (902)
Q Consensus 264 ~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~ 342 (902)
++|++|++++|++++..|.. +..+++|++|++++|.+++..+..+..+++|++|+|++|++++..|..+..+ ++|+
T Consensus 175 ~~L~~L~Ls~n~l~~~~~~~---~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 251 (306)
T 2z66_A 175 RNLTFLDLSQCQLEQLSPTA---FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 251 (306)
T ss_dssp TTCCEEECTTSCCCEECTTT---TTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCC
T ss_pred cCCCEEECCCCCcCCcCHHH---hcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCC
Confidence 44444444444444333333 3344444444444444444444444555555555555555555555555555 2556
Q ss_pred EEecccccCCC
Q 046199 343 HLGLGYNYLTS 353 (902)
Q Consensus 343 ~L~Ls~N~l~~ 353 (902)
+|++++|.+++
T Consensus 252 ~L~L~~N~~~~ 262 (306)
T 2z66_A 252 FLNLTQNDFAC 262 (306)
T ss_dssp EEECTTCCEEC
T ss_pred EEEccCCCeec
Confidence 66666665554
No 74
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.5e-31 Score=290.30 Aligned_cols=253 Identities=22% Similarity=0.222 Sum_probs=164.0
Q ss_pred cCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccc-cCCCCcccc------cCCCcccEEEcccCcccCcCCcc
Q 046199 64 LGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQL-SGSFPSFII------SNTSSLRAIDCNYNSLSGELPAN 136 (902)
Q Consensus 64 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l-~~~~~~~~~------~~~~~L~~ldls~n~l~~~~~~~ 136 (902)
.+..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|.... .++++|++||+++|++++.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---- 110 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGT---- 110 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSC----
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccch----
Confidence 34455677777777777 666665543 77777777777 334443321 1466666666666666654
Q ss_pred hhccCcccc--cCcCccceeeecccccCCCCchhhccc-----cccceeecccCcCCCCCChhhhccCcccEEeeeeCCC
Q 046199 137 IFRAIPKDI--GNLTKLKELYLGYNKLQGEIPQELGNL-----AELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSL 209 (902)
Q Consensus 137 ~~~~ip~~~--~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 209 (902)
+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 111 ----~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 111 ----APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp ----CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT
T ss_pred ----hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc
Confidence 44444 6677777777777777754 7777766 7777777777777766667777777777777777774
Q ss_pred CccccccccccCCccccccccCCCccc--cCCCCCCEEEccCccccC--cCC-CcccCCCCCceEeccCcccccCCCcCC
Q 046199 210 TGFYMTNNHFTGSIPRNLWQCEIPHEI--GNLPNLEVLGIDENHLVG--DVP-NTIFNMSTLKALSLLNNTLSGSLPSSS 284 (902)
Q Consensus 210 ~~~~~~~~~~~g~ip~~~~~~~lp~~l--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 284 (902)
. |.++ +|..+ +.+++|++|+|++|++++ .++ ..+.++++|++|+|++|++++..|...
T Consensus 186 ~----------~~~~-------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 248 (312)
T 1wwl_A 186 L----------GERG-------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS 248 (312)
T ss_dssp C----------HHHH-------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSC
T ss_pred C----------cchH-------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhh
Confidence 3 2111 11233 667777777777777762 122 233466777777777777776554322
Q ss_pred cccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCC
Q 046199 285 KNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTS 353 (902)
Q Consensus 285 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 353 (902)
+..+++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 249 --~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 249 --CDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --CCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --hhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 455677777777777777 5555554 6777777777777765 44 7777777777777777764
No 75
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.8e-30 Score=276.34 Aligned_cols=230 Identities=23% Similarity=0.254 Sum_probs=168.2
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceeccc--CCcccccccccCeeecccccccCCCCC---cCCCCCeEe
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGS--IPITVGRLNTLQGLGLENNKLEGPIPD---DLCQLSELH 468 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~---~l~~L~~L~ 468 (902)
++++|+|++|+++...+..|.++++|++|+|++|+++.. .|..+..+++|++|++++|.+++ +|. .+.+|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEE
Confidence 566666666666644444456666666666666666522 24455556666666666666652 332 233666677
Q ss_pred ccCccccCCCC-ccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCC-CCccccccccccceeccCCccc
Q 046199 469 VDHNKLSGPIP-ACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNG-SLPLDIGNMKVVVEINLSRNYL 546 (902)
Q Consensus 469 L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l 546 (902)
+++|++++..+ ..|..+++|++|++++|++++..+..|..+++|++|++++|.+++ ..|..+..+++|++|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 77777766554 567788888888888888887777788888888888888888876 4677788888888888888888
Q ss_pred cccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccccc-ccccccccCCcceecCCC
Q 046199 547 TGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLV-YLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 547 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~ 624 (902)
++..|..|..+++|+.|+|++|++++..+..|..+++|+.|||++|++++..|..+..++ +|+.|+|++|+++|.++.
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 877788888888888888888888877777788888888888888888888888888874 888888888888876553
No 76
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.7e-29 Score=296.46 Aligned_cols=290 Identities=26% Similarity=0.332 Sum_probs=162.4
Q ss_pred CCCCCCCCceeeeeEEe------eCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceE
Q 046199 23 KNWTSNTSVCSWIGITC------DVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKI 96 (902)
Q Consensus 23 ~~w~~~~~~c~w~gv~c------~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 96 (902)
++|..+.+||.|.|..| ......++.|++++++++ .+|..+. ++|++|+|++|+++ .+|. .+++|++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 35877788999987432 222224677888888887 7777665 67888888888877 6776 4677888
Q ss_pred EEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccc
Q 046199 97 LILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELE 176 (902)
Q Consensus 97 L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (902)
|+|++|++++ +|. .+++|++|++++|.+++ +|. .+++|++|+|++|+++ .+|.. +++|+
T Consensus 86 L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~---------l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~ 144 (622)
T 3g06_A 86 LEVSGNQLTS-LPV----LPPGLLELSIFSNPLTH---------LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQ 144 (622)
T ss_dssp EEECSCCCSC-CCC----CCTTCCEEEECSCCCCC---------CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCC
T ss_pred EEcCCCcCCc-CCC----CCCCCCEEECcCCcCCC---------CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCC
Confidence 8888887763 343 45566666666666553 333 2345666666666665 34443 25555
Q ss_pred eeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcC
Q 046199 177 WLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDV 256 (902)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~ 256 (902)
+|+|++|+++ .+|. .+++|+.|++++|.|+. +| ..+++|+.|+|++|++++ +
T Consensus 145 ~L~Ls~N~l~-~l~~---~~~~L~~L~L~~N~l~~--------------------l~---~~~~~L~~L~Ls~N~l~~-l 196 (622)
T 3g06_A 145 ELSVSDNQLA-SLPA---LPSELCKLWAYNNQLTS--------------------LP---MLPSGLQELSVSDNQLAS-L 196 (622)
T ss_dssp EEECCSSCCS-CCCC---CCTTCCEEECCSSCCSC--------------------CC---CCCTTCCEEECCSSCCSC-C
T ss_pred EEECcCCcCC-CcCC---ccCCCCEEECCCCCCCC--------------------Cc---ccCCCCcEEECCCCCCCC-C
Confidence 5666666555 2333 12445555555555442 11 223455555555555552 3
Q ss_pred CCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCccccccc
Q 046199 257 PNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLV 336 (902)
Q Consensus 257 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 336 (902)
|.. +++|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| .
T Consensus 197 ~~~---~~~L~~L~L~~N~l~-~l~~~------------------------------~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 197 PTL---PSELYKLWAYNNRLT-SLPAL------------------------------PSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp CCC---CTTCCEEECCSSCCS-SCCCC------------------------------CTTCCEEECCSSCCSC-CC---C
T ss_pred CCc---cchhhEEECcCCccc-ccCCC------------------------------CCCCCEEEccCCccCc-CC---C
Confidence 321 244555555555554 22221 2445555555555543 22 2
Q ss_pred ccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCC
Q 046199 337 NLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNL 416 (902)
Q Consensus 337 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l 416 (902)
.+++|+.|++++|+|++.++ .+++|++|++++|++. .+|..+..++ +|+.|+|++|.+++..|..+..+
T Consensus 239 ~l~~L~~L~Ls~N~L~~lp~---------~~~~L~~L~Ls~N~L~-~lp~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 239 LPSELKELMVSGNRLTSLPM---------LPSGLLSLSVYRNQLT-RLPESLIHLS-SETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCC-SCCGGGGGSC-TTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCcCcEEECCCCCCCcCCc---------ccccCcEEeCCCCCCC-cCCHHHhhcc-ccCEEEecCCCCCCcCHHHHHhc
Confidence 33455555555555553221 3345555555555555 4455666666 67777777777766666655544
Q ss_pred C
Q 046199 417 V 417 (902)
Q Consensus 417 ~ 417 (902)
+
T Consensus 308 ~ 308 (622)
T 3g06_A 308 T 308 (622)
T ss_dssp H
T ss_pred c
Confidence 3
No 77
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96 E-value=3.6e-29 Score=269.68 Aligned_cols=172 Identities=34% Similarity=0.458 Sum_probs=155.4
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 3468999999999999999999975 489999999987666666788999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccc
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM 882 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 882 (902)
|+++|+|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|.........
T Consensus 98 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp CCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 99999999998654 5899999999999999999999 999999999999999999999999999999887665555
Q ss_pred eecccccccccccccccc
Q 046199 883 RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 883 ~~~~~gt~~y~APE~l~~ 900 (902)
.....||+.|+|||++..
T Consensus 173 ~~~~~gt~~y~aPE~~~~ 190 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTR 190 (297)
T ss_dssp BCCCCSCGGGCCHHHHHC
T ss_pred cCCccCCcCccChhhhcC
Confidence 555789999999998753
No 78
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=284.05 Aligned_cols=181 Identities=27% Similarity=0.395 Sum_probs=160.1
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeee
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSC 791 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 791 (902)
+.+++.....++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.++..++||+|+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 456677788899999999999999999999986 48999999997532 23346688999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
.+++..|+||||++||+|.+++.+.+..+++..+..++.||+.||+||| ++||+||||||+||+++.++++||+|||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999999776667999999999999999999999 9999999999999999999999999999
Q ss_pred CceecCCCccce-eccccccccccccccc
Q 046199 872 IAKLLNGEESMR-TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 872 ~a~~~~~~~~~~-~~~~gt~~y~APE~l~ 899 (902)
+|+......... ...+||+.|||||++.
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 236 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQ 236 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHh
Confidence 998876544322 2368999999999986
No 79
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.6e-32 Score=321.01 Aligned_cols=298 Identities=14% Similarity=0.042 Sum_probs=158.5
Q ss_pred ccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccccc
Q 046199 313 NASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLP 392 (902)
Q Consensus 313 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 392 (902)
.+++|+.|++++|.+.+ +|..+..+++|++|+++..... .+.......+..+++|+.|+++++. .+.+|..+..++
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~ 293 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAA 293 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGG
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc--cchHHHHHHhhccccccccCccccc-hhHHHHHHhhcC
Confidence 34455555555555443 3344555555555555432111 0001111344455555666655532 224455555555
Q ss_pred ccccEEEeecCcccccCC-cccCCCCCCcEEEeecceecccCCcccccccccCeeeccc-----------ccccCCCC--
Q 046199 393 ITLEEIYLQNCKIRGNIP-KEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLEN-----------NKLEGPIP-- 458 (902)
Q Consensus 393 ~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-----------N~l~~~~p-- 458 (902)
+|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|++|++++ |.+++...
T Consensus 294 -~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~ 372 (592)
T 3ogk_B 294 -QIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIA 372 (592)
T ss_dssp -GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHH
T ss_pred -CCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHH
Confidence 67777777776554332 2346677777777773322233344445566777777772 44442211
Q ss_pred --CcCCCCCeEeccCccccCCCCccccC-CCcCceEecC----CCCccCc-----ccccccCCCCceEEEcCCC--ccCC
Q 046199 459 --DDLCQLSELHVDHNKLSGPIPACFGN-LNSLRNLSLG----SNELSSF-----IPSTFWNLNNILSFDFSSN--SLNG 524 (902)
Q Consensus 459 --~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~ls~N--~l~~ 524 (902)
..+.+|++|+++.|.+++..+..+.. +++|+.|+++ .|++++. ++..+.++++|++|+++++ .+++
T Consensus 373 l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~ 452 (592)
T 3ogk_B 373 LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD 452 (592)
T ss_dssp HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH
T ss_pred HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH
Confidence 12346666666666666555554544 6667777774 5666653 2333555677777777543 2444
Q ss_pred CCcccccc-ccccceeccCCccccc-cCccccccCCccceEEccCcccCCCc-cccccccccCCeEeCcCccccccCCcc
Q 046199 525 SLPLDIGN-MKVVVEINLSRNYLTG-DIPTTIGGLTNLQLLSLENNRLHGPI-PESFGALTSLESLDLSVNNLSGVIPIS 601 (902)
Q Consensus 525 ~~~~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 601 (902)
..+..+.. +++|++|++++|++++ .++..+..+++|+.|+|++|++++.. +..+..+++|+.|+|++|++++.-...
T Consensus 453 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~ 532 (592)
T 3ogk_B 453 LGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDL 532 (592)
T ss_dssp HHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTG
T ss_pred HHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHH
Confidence 33333332 5667777777777664 23444566677777777777765432 333456677777777777766543322
Q ss_pred c-ccccccccccccC
Q 046199 602 L-EKLVYLKDLNLSF 615 (902)
Q Consensus 602 l-~~l~~L~~L~l~~ 615 (902)
+ ..++.+....+..
T Consensus 533 l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 533 MQMARPYWNIELIPS 547 (592)
T ss_dssp GGGCCTTEEEEEECC
T ss_pred HHHhCCCcEEEEecC
Confidence 3 2345554444443
No 80
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96 E-value=3.1e-29 Score=274.33 Aligned_cols=173 Identities=28% Similarity=0.350 Sum_probs=152.8
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+++++.++||||+++++++...+..|+
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 35789999999999999999999864 8999999997542 3345678899999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.....
T Consensus 83 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999988654 45899999999999999999999 999999999999999999999999999999875444
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
.......+||+.|+|||++..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~ 179 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLED 179 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSS
T ss_pred CCcccccccChhhCChhhhcC
Confidence 444455789999999999854
No 81
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=5.7e-29 Score=270.13 Aligned_cols=174 Identities=24% Similarity=0.396 Sum_probs=154.2
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 45789999999999999999999864 89999999876666677889999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccc
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM 882 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 882 (902)
|+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 99999999999887778999999999999999999999 999999999999999999999999999999876543321
Q ss_pred e--------------ecccccccccccccccc
Q 046199 883 R--------------TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 883 ~--------------~~~~gt~~y~APE~l~~ 900 (902)
. ....||+.|+|||++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 196 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTT
T ss_pred ccccccccccccccccccCCCcceeCHHHhcC
Confidence 1 13579999999998753
No 82
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=3e-29 Score=281.04 Aligned_cols=179 Identities=25% Similarity=0.357 Sum_probs=157.0
Q ss_pred CHHHHHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeee
Q 046199 717 SYRELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCS 792 (902)
Q Consensus 717 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 792 (902)
.+.++....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+.+++.++||||+++++++.
T Consensus 60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 139 (410)
T 3v8s_A 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139 (410)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 345677888999999999999999999999865 8899999997532 223456889999999999999999999999
Q ss_pred cCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 046199 793 NGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGI 872 (902)
Q Consensus 793 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 872 (902)
+++..|+||||++||+|.+++... .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 140 DDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999998653 5899999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCccc-eecccccccccccccccc
Q 046199 873 AKLLNGEESM-RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 873 a~~~~~~~~~-~~~~~gt~~y~APE~l~~ 900 (902)
|+........ ....+||+.|||||++..
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~ 243 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKS 243 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHT
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhc
Confidence 9887654332 234689999999998753
No 83
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.1e-29 Score=275.05 Aligned_cols=283 Identities=17% Similarity=0.165 Sum_probs=200.1
Q ss_pred cCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcccccccc
Q 046199 237 GNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASK 316 (902)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 316 (902)
..++...+.++++|+++ .+|..+. ++|++|++++|++++..+.. +.++++|++|++++|++++..|..|..+++
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSD---LQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTT---TTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHH---hccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 34455667899999998 6777665 48999999999998654444 778899999999999999888888999999
Q ss_pred ccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccC-CCCcccCcccccccccc
Q 046199 317 LFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAEN-PLNGVLPSSIGNLPITL 395 (902)
Q Consensus 317 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~~L 395 (902)
|++|+|++|++++..+..|..+++|++|++++|++++..+. ..+..+++|++|++++| .+....+..+..++ +|
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~----~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L 176 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET----SLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT-FL 176 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS----CSCTTCTTCCEEEEEESSSCCEECTTTTTTCC-EE
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch----hhhccCCCCcEEECCCCccccccCHHHccCCC-CC
Confidence 99999999999977666688999999999999999864431 25678888999999988 46666677788887 88
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcccc
Q 046199 396 EEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLS 475 (902)
Q Consensus 396 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~ 475 (902)
++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|++|++++|++++..+..+..
T Consensus 177 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------------ 244 (353)
T 2z80_A 177 EELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST------------ 244 (353)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----------------
T ss_pred CEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc------------
Confidence 99999999988888888888889999999998887544444556788888888888887654433220
Q ss_pred CCCCccccCCCcCceEecCCCCccC----cccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccc
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSS----FIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTG 548 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 548 (902)
....+.++.+++++|.+++ .+|..+..+++|++|++++|+++...+..|..+++|++|++++|++.+
T Consensus 245 ------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 245 ------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp --------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 0112233334444443332 134444555555555555555553222223455555555555555554
No 84
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.1e-28 Score=280.18 Aligned_cols=229 Identities=24% Similarity=0.280 Sum_probs=196.0
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCc---CCCCCeEecc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDD---LCQLSELHVD 470 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~L~ 470 (902)
+++.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+.. +.+|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 6777777777777777777777788888888888887777777777888888888888777544433 3478888888
Q ss_pred CccccCCCCccccCCCcCceEecCC-CCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCcccccc
Q 046199 471 HNKLSGPIPACFGNLNSLRNLSLGS-NELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGD 549 (902)
Q Consensus 471 ~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 549 (902)
+|++++..+..|.++++|+.|++++ |.+..+.+..|.++++|++|++++|++++. | .+..+++|++|+|++|++++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 8888877778899999999999998 566666666899999999999999999964 4 588899999999999999999
Q ss_pred CccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 550 IPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 550 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..+..+++|+.|+|++|+|.|.+..
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 999999999999999999999998899999999999999999999988888889999999999999999987764
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=275.95 Aligned_cols=173 Identities=27% Similarity=0.375 Sum_probs=146.1
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 456899999999999999999999865 8999999997542 23456778899999988 699999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+...
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999998654 45899999999999999999999 9999999999999999999999999999998655
Q ss_pred CCccceeccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.........+||+.|+|||++.
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~ 197 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQ 197 (353)
T ss_dssp C---------CCGGGCCHHHHH
T ss_pred cCCccccccCCCcCeEChhhcC
Confidence 4444445578999999999875
No 86
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.9e-29 Score=267.06 Aligned_cols=221 Identities=24% Similarity=0.290 Sum_probs=121.6
Q ss_pred ceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeeccc
Q 046199 371 KYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLEN 450 (902)
Q Consensus 371 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 450 (902)
+.++.+++.+.. +|..+ +.++++|++++|.+++..+..|..+++|++|++++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~~-ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSS-CCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCccc-CCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 345555555542 33322 23788888888888877777788888888888888888877777888777777777777
Q ss_pred cc-ccCCCCCcC---CCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCC
Q 046199 451 NK-LEGPIPDDL---CQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSL 526 (902)
Q Consensus 451 N~-l~~~~p~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 526 (902)
|+ +....|..+ .+|++|++++|++++..|..|.++++|++|++++|++++..+..|..+++|++|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 76 553323222 24444444444444444444445555555555555555444444444455555555555444433
Q ss_pred ccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc
Q 046199 527 PLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS 595 (902)
Q Consensus 527 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 595 (902)
+..|..+++|++|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 333444444444444444444444444444444444444444444433344444444444444444444
No 87
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=278.38 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=207.9
Q ss_pred eeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccc
Q 046199 372 YIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENN 451 (902)
Q Consensus 372 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 451 (902)
.++.+++.+. .+|..+. .+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 47 ~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4444444444 3444333 37788888888888877888888888888888888888777788888888888888888
Q ss_pred cccCCCCCc---CCCCCeEeccCccccCCCCccccCCCcCceEecCC-CCccCcccccccCCCCceEEEcCCCccCCCCc
Q 046199 452 KLEGPIPDD---LCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGS-NELSSFIPSTFWNLNNILSFDFSSNSLNGSLP 527 (902)
Q Consensus 452 ~l~~~~p~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 527 (902)
++++..+.. +.+|++|+|++|++++..+..|.++++|+.|++++ |.+..+.+..|.++++|++|++++|+++. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 887544433 34888888889988888888999999999999999 55666666689999999999999999995 45
Q ss_pred cccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccc
Q 046199 528 LDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVY 607 (902)
Q Consensus 528 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 607 (902)
.+..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..+..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 5888999999999999999999999999999999999999999988999999999999999999999888888999999
Q ss_pred cccccccCCcceecCCC
Q 046199 608 LKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 608 L~~L~l~~N~l~~~~p~ 624 (902)
|+.|+|++|+|.|.+..
T Consensus 281 L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECCSSCEECSSTT
T ss_pred CCEEEcCCCCccCCCCc
Confidence 99999999999987653
No 88
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=4.9e-29 Score=271.98 Aligned_cols=174 Identities=26% Similarity=0.390 Sum_probs=153.6
Q ss_pred HhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
....++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 345678999999999999999999984 59999999997543 334567889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999999998654 45899999999999999999999 99999999999999999999999999999987654
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.. .....+||+.|+|||++..
T Consensus 167 ~~-~~~~~~gt~~y~aPE~~~~ 187 (328)
T 3fe3_A 167 GG-KLDAFCGAPPYAAPELFQG 187 (328)
T ss_dssp SC-GGGTTSSSGGGCCHHHHHT
T ss_pred CC-ccccccCCcceeCcccccC
Confidence 33 2344679999999998754
No 89
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=5.3e-29 Score=277.48 Aligned_cols=175 Identities=26% Similarity=0.340 Sum_probs=152.2
Q ss_pred HhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCe
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNF 796 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 796 (902)
....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+++.
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 3456789999999999999999999865 7889999997543 23345688999999887 89999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999999998654 45899999999999999999999 999999999999999999999999999999875
Q ss_pred CCCccceecccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..........+||+.|+|||++..
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~ 227 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRG 227 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTT
T ss_pred ccCCCccccccCCcccCCchhhcC
Confidence 444444555789999999999864
No 90
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=6.7e-29 Score=272.39 Aligned_cols=176 Identities=27% Similarity=0.404 Sum_probs=151.7
Q ss_pred HHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCC
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGN 795 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 795 (902)
.....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+..|.++++.+ +||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 34567899999999999999999999864 8899999997542 23456678899999877 8999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999998654 45899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
...........+||+.|+|||++..
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~ 192 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLG 192 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred cccCCCcccCCCCCcccCChhhhcC
Confidence 5444444455789999999998754
No 91
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=1.2e-28 Score=267.51 Aligned_cols=173 Identities=27% Similarity=0.413 Sum_probs=151.2
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++.+++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 457899999999999999999999889999999987543 233567889999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++ ++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 99985 888888777777999999999999999999999 99999999999999999999999999999998765544
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 175 ~~~~~~~t~~y~aPE~~~~ 193 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMG 193 (311)
T ss_dssp ---CCCCCCTTCCHHHHTT
T ss_pred cccCCcccCCcCCHHHhcC
Confidence 4455679999999998753
No 92
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=6.1e-30 Score=278.36 Aligned_cols=268 Identities=18% Similarity=0.185 Sum_probs=209.5
Q ss_pred cccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccc
Q 046199 316 KLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITL 395 (902)
Q Consensus 316 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 395 (902)
+++.++++.+.+.......+..+++|++|++++|.+++..+ ..+..++ +|
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-----~~~~~l~-------------------------~L 60 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISA-----ADLAPFT-------------------------KL 60 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCH-----HHHTTCT-------------------------TC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCH-----HHhhCCC-------------------------cC
Confidence 45667777777765555556666777777777777776544 3344444 55
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcccc
Q 046199 396 EEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLS 475 (902)
Q Consensus 396 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~ 475 (902)
++|+|++|++++..+ |..+++|++|++++|++++.. ..++|++|++++|++++..+..+.+|+.|++++|+++
T Consensus 61 ~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT 133 (317)
T ss_dssp CEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCC
T ss_pred CEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCC
Confidence 555555555554433 666677777777777776432 2367777777777777666666778899999999999
Q ss_pred CCCCccccCCCcCceEecCCCCccCccccccc-CCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCcccc
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSSFIPSTFW-NLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTI 554 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 554 (902)
+..+..|..+++|++|++++|++++..+..+. .+++|++|++++|++++. + ....+++|++|+|++|++++ +|..|
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~ 210 (317)
T 3o53_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEF 210 (317)
T ss_dssp SGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGG
T ss_pred CccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhh
Confidence 88888899999999999999999998887774 789999999999999865 3 33458999999999999995 45569
Q ss_pred ccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc-ccCCccccccccccccccc-CCcceecCCC
Q 046199 555 GGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS-GVIPISLEKLVYLKDLNLS-FNRLEGEIPS 624 (902)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~-~N~l~~~~p~ 624 (902)
..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.++++ .+.++|..|.
T Consensus 211 ~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 211 QSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp GGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999999999 57888999999999999999999 7888899999999999999 5567776665
No 93
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=270.96 Aligned_cols=173 Identities=27% Similarity=0.412 Sum_probs=145.0
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4578999999999999999999985 58999999987653 234567899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||++++++.+||+|||+|........
T Consensus 88 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999998654 45899999999999999999999 99999999999999999999999999999987654332
Q ss_pred -ceecccccccccccccccc
Q 046199 882 -MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 -~~~~~~gt~~y~APE~l~~ 900 (902)
.....+||+.|+|||++..
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~ 183 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQG 183 (347)
T ss_dssp --------CGGGCCHHHHTT
T ss_pred ccccccCCccCccCHHHHcC
Confidence 2344679999999998753
No 94
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.3e-30 Score=293.93 Aligned_cols=236 Identities=18% Similarity=0.179 Sum_probs=145.8
Q ss_pred CCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCee
Q 046199 367 SSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGL 446 (902)
Q Consensus 367 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 446 (902)
+++|++|++++|.+.+..|..|..++ +|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34667777777777666666666666 67777777777665544 6666677777777776664322 2566666
Q ss_pred ecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccccccc-CCCCceEEEcCCCccCCC
Q 046199 447 GLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFW-NLNNILSFDFSSNSLNGS 525 (902)
Q Consensus 447 ~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~~ 525 (902)
++++|.+++..+..+.+|+.|++++|.+++..|..|.++++|+.|+|++|++++.+|..+. .+++|++|+|++|.+++.
T Consensus 105 ~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 105 HAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp ECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred ECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6666666655555555666666666666666666666666666666666666665555554 566666666666666643
Q ss_pred CccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc-ccCCccccc
Q 046199 526 LPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS-GVIPISLEK 604 (902)
Q Consensus 526 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~ 604 (902)
| ....+++|+.|+|++|+|++. |..|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|.+. +.+|..+..
T Consensus 185 -~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 -K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp -E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred -c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 2 222456666666666666643 3336666666666666666663 5555666666666666666665 455555566
Q ss_pred cccccccccc
Q 046199 605 LVYLKDLNLS 614 (902)
Q Consensus 605 l~~L~~L~l~ 614 (902)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 6666665554
No 95
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.1e-28 Score=278.79 Aligned_cols=246 Identities=21% Similarity=0.195 Sum_probs=111.2
Q ss_pred CCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcC
Q 046199 70 LQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLT 149 (902)
Q Consensus 70 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~ 149 (902)
...++.+++.++ .+|..+. ++|++|+|++|++++..| ..++++++|++||+++|.+++. .|..++.++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~--------~~~~~~~l~ 123 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQI--------EVGAFNGLA 123 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEE--------CTTTTTTCT
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCc--------ChhhccCcc
Confidence 345555555555 5555443 455666666666554211 1122333333333333333211 233444555
Q ss_pred ccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCC-CCccccccccccCCcccccc
Q 046199 150 KLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNS-LTGFYMTNNHFTGSIPRNLW 228 (902)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~g~ip~~~~ 228 (902)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|. ++ .+|
T Consensus 124 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~-----------~i~---- 188 (452)
T 3zyi_A 124 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE-----------YIS---- 188 (452)
T ss_dssp TCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC-----------EEC----
T ss_pred cCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcc-----------ccC----
Confidence 55555555555553333345555555555555555553333445555555555555532 21 111
Q ss_pred ccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCC
Q 046199 229 QCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIP 308 (902)
Q Consensus 229 ~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 308 (902)
+..|..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..|.. |.++++|++|+|++|++++..+
T Consensus 189 ----~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 189 ----EGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGS---FHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp ----TTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGG---GTTCTTCCEEECTTSCCCEECT
T ss_pred ----hhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCccc---ccCccCCCEEEeCCCcCceECH
Confidence 1234445555555555555542 22 2444444444444444444333333 3344444444444444444444
Q ss_pred ccccccccccEEEccCCcccCcccccccccccccEEecccccC
Q 046199 309 GFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYL 351 (902)
Q Consensus 309 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 351 (902)
..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 4444444444444444444444334444444444444444443
No 96
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.95 E-value=1.4e-28 Score=270.32 Aligned_cols=173 Identities=26% Similarity=0.341 Sum_probs=152.0
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 798 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+.+++++ +||||+++++++.+.+..|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 35789999999999999999999865 8899999997543 23456788999999988 8999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 87 lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999998654 45899999999999999999999 99999999999999999999999999999986544
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
........+||+.|+|||++..
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~ 184 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRG 184 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTT
T ss_pred CCCcccccCCCccccCccccCC
Confidence 4444455789999999998754
No 97
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95 E-value=3.2e-28 Score=265.28 Aligned_cols=181 Identities=28% Similarity=0.346 Sum_probs=157.6
Q ss_pred ccCHHHHHhhcc----------cccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC
Q 046199 715 RFSYRELLLATD----------HFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN 783 (902)
Q Consensus 715 ~~~~~~~~~~~~----------~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 783 (902)
.++++++..+.+ .|+..+.||+|+||.||+|++. +++.||||+++.......+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 455555554443 3777889999999999999986 59999999998766666678999999999999999
Q ss_pred ccceeeeeecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC
Q 046199 784 LVKIISSCSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM 863 (902)
Q Consensus 784 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (902)
|+++++++...+..|+||||+++++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCC
Confidence 99999999999999999999999999998854 45899999999999999999999 99999999999999999999
Q ss_pred cEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 864 VAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 864 ~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.+||+|||++..............||+.|+|||++..
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 215 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR 215 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcC
Confidence 9999999999887655444455679999999998753
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=271.53 Aligned_cols=172 Identities=30% Similarity=0.428 Sum_probs=152.6
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
+..++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 345789999999999999999999865 8899999997542 234567889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||++||+|.+++.. ...+++..+..++.||+.||+||| +.||+||||||+||+++.+|.+||+|||+|+....
T Consensus 92 lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 92 MVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999999865 456999999999999999999999 99999999999999999999999999999987654
Q ss_pred Cccceeccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~ 899 (902)
.. .....+||+.|+|||++.
T Consensus 168 ~~-~~~~~~gt~~Y~aPE~~~ 187 (384)
T 4fr4_A 168 ET-QITTMAGTKPYMAPEMFS 187 (384)
T ss_dssp TC-CBCCCCSCGGGCCGGGTC
T ss_pred CC-ceeccCCCccccCCeeec
Confidence 33 334578999999999985
No 99
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.95 E-value=1.4e-28 Score=270.80 Aligned_cols=174 Identities=22% Similarity=0.288 Sum_probs=151.8
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+..|..+++.+ +||+|+++++++.+.+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 456789999999999999999999875 7899999997542 23456788899999988 799999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+...
T Consensus 97 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999998654 45899999999999999999999 9999999999999999999999999999998754
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.........+||+.|+|||++..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~ 195 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAY 195 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTT
T ss_pred cCCcccccccCCccccChhhhcC
Confidence 44444455789999999998753
No 100
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.5e-28 Score=264.73 Aligned_cols=171 Identities=21% Similarity=0.305 Sum_probs=152.4
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|+++.. ....+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4789999999999999999999864 889999998754 33456788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC--CCcEEEEeecCceecCCCcc
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD--DMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL~DFG~a~~~~~~~~ 881 (902)
++|++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999776667999999999999999999999 999999999999999987 78999999999988764433
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
.....||+.|+|||++..
T Consensus 160 -~~~~~gt~~y~aPE~~~~ 177 (321)
T 1tki_A 160 -FRLLFTAPEYYAPEVHQH 177 (321)
T ss_dssp -EEEEESCGGGSCHHHHTT
T ss_pred -cccccCChhhcCcHHhcC
Confidence 344679999999998753
No 101
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.95 E-value=3.2e-28 Score=261.78 Aligned_cols=171 Identities=27% Similarity=0.399 Sum_probs=151.5
Q ss_pred ccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 589999999999999999999864 8999999997553 2344778899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccc
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM 882 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 882 (902)
|+++ ++.+.+......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.|+........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 9976 676777666677999999999999999999999 999999999999999999999999999999987655555
Q ss_pred eecccccccccccccccc
Q 046199 883 RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 883 ~~~~~gt~~y~APE~l~~ 900 (902)
.....||+.|+|||++..
T Consensus 158 ~~~~~~t~~y~aPE~~~~ 175 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFG 175 (292)
T ss_dssp CCSCCSCGGGCCHHHHTT
T ss_pred ccCCccccCCcChHHHcC
Confidence 555679999999998753
No 102
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.95 E-value=3.4e-28 Score=264.06 Aligned_cols=170 Identities=28% Similarity=0.398 Sum_probs=150.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 3578999999999999999999986 48999999997542 2345678889999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.....
T Consensus 84 v~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp EECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 99999999999999654 45899999999999999999999 999999999999999999999999999999876432
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
....+||+.|+|||++..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~ 177 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVST 177 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTT
T ss_pred ---cccccCCccccCHhHhcC
Confidence 234679999999998753
No 103
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=7.5e-28 Score=257.83 Aligned_cols=265 Identities=20% Similarity=0.202 Sum_probs=183.2
Q ss_pred cEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccccccE
Q 046199 318 FLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPITLEE 397 (902)
Q Consensus 318 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 397 (902)
+.++.+++.++. +|..+ .++|++|++++|.+++..+ ..+..++ +|++
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~-----~~~~~~~-------------------------~L~~ 60 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPA-----ASFRACR-------------------------NLTI 60 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECT-----TTTTTCT-------------------------TCCE
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCH-----HHcccCC-------------------------CCCE
Confidence 566777777763 34333 3466666666666665443 3344444 4555
Q ss_pred EEeecCcccccCCcccCCCCCCcEEEeecce-ecccCCcccccccccCeeecccccccCCCCCc---CCCCCeEeccCcc
Q 046199 398 IYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQ-LSGSIPITVGRLNTLQGLGLENNKLEGPIPDD---LCQLSELHVDHNK 473 (902)
Q Consensus 398 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~L~~N~ 473 (902)
|++++|.+++..|..|..+++|++|++++|+ ++...|..|..+++|++|++++|++++..|.. +.+|++|++++|+
T Consensus 61 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 140 (285)
T 1ozn_A 61 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA 140 (285)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCc
Confidence 5555555554445555555555555555554 44444555555555555555555555443432 2356666666666
Q ss_pred ccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTT 553 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 553 (902)
+++..+..|.++++|+.|++++|+++++.+..|..+++|++|++++|++++..|..|..+++|++|++++|++++..+..
T Consensus 141 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 220 (285)
T 1ozn_A 141 LQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220 (285)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHH
T ss_pred ccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHH
Confidence 66677778999999999999999999988888999999999999999999988999999999999999999999877788
Q ss_pred cccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccc--ccccccccccCC
Q 046199 554 IGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEK--LVYLKDLNLSFN 616 (902)
Q Consensus 554 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~--l~~L~~L~l~~N 616 (902)
|..+++|+.|+|++|++....+.. .-...++.+..+.|.+....|..+.+ +..++..+++++
T Consensus 221 ~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 221 LAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp HTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred cccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 999999999999999998544321 22244566667788888888877654 344555454443
No 104
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.95 E-value=5e-28 Score=267.20 Aligned_cols=172 Identities=27% Similarity=0.397 Sum_probs=151.2
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccch------hhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++..... ..+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 35789999999999999999999864 899999999765321 34678999999999999999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecC
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM----VAHLSDFGI 872 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kL~DFG~ 872 (902)
.|+||||++||+|.+++.. ...+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999855 456899999999999999999999 99999999999999998877 799999999
Q ss_pred ceecCCCccceecccccccccccccccc
Q 046199 873 AKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 873 a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
++....... ....+||+.|+|||++..
T Consensus 166 a~~~~~~~~-~~~~~gt~~y~aPE~~~~ 192 (361)
T 2yab_A 166 AHEIEDGVE-FKNIFGTPEFVAPEIVNY 192 (361)
T ss_dssp CEECCTTCC-CCCCCSCGGGCCHHHHTT
T ss_pred ceEcCCCCc-cccCCCCccEECchHHcC
Confidence 988755332 334679999999998753
No 105
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.95 E-value=2.4e-28 Score=267.26 Aligned_cols=184 Identities=41% Similarity=0.673 Sum_probs=160.4
Q ss_pred ccccCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCccceeeee
Q 046199 713 WRRFSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 791 (902)
Q Consensus 713 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 791 (902)
...+++.++....++|++.+.||+|+||.||+|++.+++.||+|+++.... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 356889999999999999999999999999999987899999999875532 2334789999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCC---CeEEcCCCCCCEEEcCCCcE
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSN---RSLDIFQRLSIMIDVALALEYLHFGYSN---PVVHCDIKPSNILLDDDMVA 865 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~---~ivHrDlkp~NIll~~~~~~ 865 (902)
...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999997643 34899999999999999999999 77 99999999999999999999
Q ss_pred EEEeecCceecCCCccc-eeccccccccccccccc
Q 046199 866 HLSDFGIAKLLNGEESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 866 kL~DFG~a~~~~~~~~~-~~~~~gt~~y~APE~l~ 899 (902)
||+|||+|+........ .....||+.|+|||++.
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 208 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 208 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhc
Confidence 99999999877544333 23356999999999874
No 106
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.95 E-value=1.6e-28 Score=265.95 Aligned_cols=182 Identities=30% Similarity=0.471 Sum_probs=144.1
Q ss_pred ccCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeee
Q 046199 715 RFSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCS 792 (902)
Q Consensus 715 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 792 (902)
.....++.+..++|++.+.||+|+||.||+|++ +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 104 (309)
T 3p86_A 26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104 (309)
T ss_dssp ------CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCCcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 344455667788999999999999999999987 68899999987553 234567899999999999999999999999
Q ss_pred cCCeeEEEEEccCCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEEEE
Q 046199 793 NGNFKALVLEYMANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLDDDMVAHLS 868 (902)
Q Consensus 793 ~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~~~kL~ 868 (902)
..+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~ 181 (309)
T 3p86_A 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVC 181 (309)
T ss_dssp STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEEC
T ss_pred ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEEC
Confidence 99999999999999999999965432 3889999999999999999999 999 9999999999999999999999
Q ss_pred eecCceecCCCccceecccccccccccccccc
Q 046199 869 DFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 869 DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|||+++.............||+.|+|||++..
T Consensus 182 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 213 (309)
T 3p86_A 182 DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213 (309)
T ss_dssp CCC-----------------CCTTSCHHHHTT
T ss_pred CCCCCccccccccccccCCCCccccChhhhcC
Confidence 99999865544333445679999999998753
No 107
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=2.4e-28 Score=269.69 Aligned_cols=174 Identities=22% Similarity=0.332 Sum_probs=150.8
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-----chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-----DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3568999999999999999999886 48999999986432 12357789999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeec
Q 046199 798 ALVLEYMANGSLEKCLYSS---NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV---AHLSDFG 871 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---~kL~DFG 871 (902)
|+||||+++++|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999998877542 345899999999999999999999 999999999999999987654 9999999
Q ss_pred CceecCCCccceecccccccccccccccc
Q 046199 872 IAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 872 ~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+++.............||+.|+|||++..
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 207 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKR 207 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTT
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcC
Confidence 99987665544455689999999998753
No 108
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.95 E-value=1.8e-28 Score=267.53 Aligned_cols=181 Identities=39% Similarity=0.647 Sum_probs=157.6
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
+.+.++....++|++.+.||+|+||.||+|++.+++.||+|++........+.+.+|+++++.++||||+++++++..++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34444556788999999999999999999998889999999988766666788999999999999999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 046199 796 FKALVLEYMANGSLEKCLYSSN---RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGI 872 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 872 (902)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999986543 34899999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCcc--ceeccccccccccccccc
Q 046199 873 AKLLNGEES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 873 a~~~~~~~~--~~~~~~gt~~y~APE~l~ 899 (902)
++....... ......||+.|+|||++.
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 214 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFI 214 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred ccccccccccccccccCCCccccCHHHhc
Confidence 987543222 122356899999999874
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.95 E-value=4.4e-28 Score=261.48 Aligned_cols=172 Identities=27% Similarity=0.433 Sum_probs=146.4
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc--------------------------hhhhhHHHHHHHH
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD--------------------------GALKSFDAECEVL 776 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l 776 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|++..... ...+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 45789999999999999999998854 88999999865421 1236788999999
Q ss_pred HhCCCCCccceeeeeec--CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCC
Q 046199 777 KSVRHRNLVKIISSCSN--GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKP 854 (902)
Q Consensus 777 ~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (902)
+.++||||+++++++.+ .+..|+||||+++++|.+++. ...+++..+..++.|++.||+||| ++||+||||||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp 165 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKP 165 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence 99999999999999976 578999999999999988653 346899999999999999999999 99999999999
Q ss_pred CCEEEcCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 855 SNILLDDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 855 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+||+++.++.+||+|||+++.............||+.|+|||++..
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 211 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSE 211 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCT
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhcc
Confidence 9999999999999999999987655544455689999999998753
No 110
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.95 E-value=1.7e-28 Score=263.26 Aligned_cols=171 Identities=26% Similarity=0.420 Sum_probs=147.4
Q ss_pred ccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
++|++.+.||+|+||.||+|++.+++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+..|+||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999997799999999975432 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccce
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMR 883 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 883 (902)
+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 976 999998776677999999999999999999999 9999999999999999999999999999998765444444
Q ss_pred ecccccccccccccccc
Q 046199 884 TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 884 ~~~~gt~~y~APE~l~~ 900 (902)
....||+.|+|||++..
T Consensus 158 ~~~~~t~~y~aPE~~~~ 174 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMG 174 (288)
T ss_dssp ----CCCTTCCHHHHTT
T ss_pred ccccccccccCchheeC
Confidence 44678999999998753
No 111
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.95 E-value=6.9e-28 Score=268.54 Aligned_cols=172 Identities=22% Similarity=0.343 Sum_probs=153.3
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.++|++.+.||+|+||.||+|.+. +++.||+|++..........+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999986 4889999999876655667899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC--CCcEEEEeecCceecCCCcc
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD--DMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL~DFG~a~~~~~~~~ 881 (902)
+++|+|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++. ++.+||+|||+|+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999766667999999999999999999999 999999999999999974 56899999999998764433
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
.....||+.|+|||++..
T Consensus 207 -~~~~~gt~~y~aPE~~~~ 224 (387)
T 1kob_A 207 -VKVTTATAEFAAPEIVDR 224 (387)
T ss_dssp -EEEECSSGGGCCHHHHTT
T ss_pred -eeeeccCCCccCchhccC
Confidence 334579999999998753
No 112
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.95 E-value=2.6e-28 Score=266.75 Aligned_cols=174 Identities=27% Similarity=0.418 Sum_probs=141.5
Q ss_pred hhcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeecc----chhhhhHHHHHHHHHhCCCCCccceeeeeecC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 794 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 794 (902)
+..++|++.+.||+|+||.||+|++. +++.||+|+++... ......+.+|+++++.++||||+++++++..+
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 93 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG 93 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence 45678999999999999999999873 58999999997542 23346678899999999999999999999999
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
+..|+||||+++++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred CEEEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999998654 45889999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCccceecccccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
............+||+.|+|||++..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~ 195 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMR 195 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTT
T ss_pred ccccCCccccccCCCcCccCHhhCcC
Confidence 65444444445679999999998753
No 113
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=1.7e-28 Score=260.47 Aligned_cols=175 Identities=26% Similarity=0.415 Sum_probs=153.9
Q ss_pred HHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
+.+..++|++.+.||+|+||.||+|++.+++.||+|+++.... ..+++.+|++++++++||||+++++++.+++..++|
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred EEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 3456689999999999999999999998899999999975533 346789999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999999877777999999999999999999999 9999999999999999999999999999998664332
Q ss_pred cc-eeccccccccccccccc
Q 046199 881 SM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 881 ~~-~~~~~gt~~y~APE~l~ 899 (902)
.. .....+|+.|+|||++.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~ 180 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFS 180 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHH
T ss_pred cccccCcccccccCCHHHhc
Confidence 21 22245778899999874
No 114
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.95 E-value=4.8e-28 Score=264.33 Aligned_cols=174 Identities=26% Similarity=0.491 Sum_probs=149.2
Q ss_pred hhcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
+..++|++.+.||+|+||.||+|++. .+..||||+++... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 44678999999999999999999985 34569999997653 34457899999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999999777677999999999999999999999 9999999999999999999999999999998875
Q ss_pred CCccce---eccccccccccccccc
Q 046199 878 GEESMR---TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~---~~~~gt~~y~APE~l~ 899 (902)
...... ....+|+.|+|||++.
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~ 227 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIA 227 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHH
T ss_pred cCccceeeccCCCCcccccCHhHhc
Confidence 433221 2234678899999874
No 115
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=8e-29 Score=268.87 Aligned_cols=248 Identities=21% Similarity=0.247 Sum_probs=121.3
Q ss_pred cCcCccceeeecccccCCCCchhhccccccceeecccCcC-CCCCChhhh-------ccCcccEEeeeeCCCCccccccc
Q 046199 146 GNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFL-TGTIPSSIF-------NLSSLLELDFSNNSLTGFYMTNN 217 (902)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~ 217 (902)
+..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.++
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~------- 108 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT------- 108 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCB-------
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCccc-------
Confidence 3444566666666666 455555533 56666666665 334554444 4556666666665532
Q ss_pred cccCCccccccccCCCccc--cCCCCCCEEEccCccccCcCCCcccCC-----CCCceEeccCcccccCCCcCCcccCCC
Q 046199 218 HFTGSIPRNLWQCEIPHEI--GNLPNLEVLGIDENHLVGDVPNTIFNM-----STLKALSLLNNTLSGSLPSSSKNLIGL 290 (902)
Q Consensus 218 ~~~g~ip~~~~~~~lp~~l--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~l 290 (902)
|.+| ..+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|.. +..+
T Consensus 109 ---~~~~---------~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~---~~~l 172 (312)
T 1wwl_A 109 ---GTAP---------PPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ---VRVF 172 (312)
T ss_dssp ---SCCC---------CCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTT---CCCC
T ss_pred ---chhH---------HHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHH---hccC
Confidence 2233 332 5555566666666665544 5555544 55555555555555443333 4445
Q ss_pred cccceeeccCccCCCC--CCccc--cccccccEEEccCCcccCc---ccccccccccccEEecccccCCCCCCccccccc
Q 046199 291 PNIERLNLGLNNLSGR--IPGFI--FNASKLFLLELTGNSFSGF---IPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSS 363 (902)
Q Consensus 291 ~~L~~L~Ls~N~l~~~--~~~~l--~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~ 363 (902)
++|++|++++|++.+. .+..+ ..+++|++|+|++|++++. ....+..+++|++|++++|++++..|. ..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~----~~ 248 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA----PS 248 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC----SC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch----hh
Confidence 5555555555554432 11122 4555566666666665521 112233455666666666666554321 22
Q ss_pred ccCCCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceec
Q 046199 364 LANSSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLS 430 (902)
Q Consensus 364 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 430 (902)
+..+++|++|++++|+++ .+|..+. + +|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 249 ~~~l~~L~~L~Ls~N~l~-~ip~~~~--~-~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 249 CDWPSQLNSLNLSFTGLK-QVPKGLP--A-KLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CCCCTTCCEEECTTSCCS-SCCSSCC--S-EEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred hhhcCCCCEEECCCCccC-hhhhhcc--C-CceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 233344444444444444 3333333 2 444444444444433 32 444444444444444444
No 116
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.95 E-value=6.1e-28 Score=273.63 Aligned_cols=173 Identities=23% Similarity=0.347 Sum_probs=151.3
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999875 48999999997653 23456789999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc---CCCcEEEEeecCceecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD---DDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a~~~~ 877 (902)
|||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||+|+...
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999998664 45899999999999999999999 99999999999999998 56789999999998876
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..........||+.|+|||++..
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~ 187 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRK 187 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTT
T ss_pred CCCceeecccCCcccCCHHHhcC
Confidence 65554455789999999998753
No 117
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=3.9e-28 Score=257.58 Aligned_cols=174 Identities=26% Similarity=0.424 Sum_probs=153.7
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.+..++|++.+.||+|+||.||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 356689999999999999999999998888999999976533 3467899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999999776667999999999999999999999 99999999999999999999999999999987654433
Q ss_pred ce-eccccccccccccccc
Q 046199 882 MR-TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 882 ~~-~~~~gt~~y~APE~l~ 899 (902)
.. ....+|+.|+|||++.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~ 178 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFH 178 (268)
T ss_dssp EECCSCCCCGGGCCHHHHH
T ss_pred hcccCCCcCcccCCHHHHh
Confidence 22 2245677899999874
No 118
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.95 E-value=4.5e-28 Score=269.36 Aligned_cols=175 Identities=23% Similarity=0.462 Sum_probs=150.3
Q ss_pred hhcccccccCeecccceeeEEEEEeC--------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCccceeeeee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSCS 792 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 792 (902)
...++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+++++.+ +||||+++++++.
T Consensus 78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 45688999999999999999999863 25679999997553 33457889999999999 8999999999999
Q ss_pred cCCeeEEEEEccCCCChHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCE
Q 046199 793 NGNFKALVLEYMANGSLEKCLYSSN---------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNI 857 (902)
Q Consensus 793 ~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NI 857 (902)
.++..|+||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhE
Confidence 9999999999999999999997643 24789999999999999999999 99999999999999
Q ss_pred EEcCCCcEEEEeecCceecCCCccce--ecccccccccccccccc
Q 046199 858 LLDDDMVAHLSDFGIAKLLNGEESMR--TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 858 ll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~gt~~y~APE~l~~ 900 (902)
+++.++.+||+|||+|+......... ....+|+.|+|||++..
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 279 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 279 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC
Confidence 99999999999999998765443222 22457889999998743
No 119
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=6.2e-28 Score=265.62 Aligned_cols=170 Identities=28% Similarity=0.375 Sum_probs=150.8
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3478999999999999999999986 48999999997542 2345678899999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 119 v~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999999999654 45899999999999999999999 999999999999999999999999999999876543
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
....+||+.|+|||++..
T Consensus 195 ---~~~~~gt~~y~aPE~~~~ 212 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILS 212 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTT
T ss_pred ---cccccCCccccCHHHhcC
Confidence 234679999999998753
No 120
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.95 E-value=4.4e-28 Score=260.83 Aligned_cols=173 Identities=27% Similarity=0.414 Sum_probs=146.0
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 3578999999999999999999986 48999999986443 2345788999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999998654 45899999999999999999999 999999999999999999999999999999876543
Q ss_pred ccc-eecccccccccccccccc
Q 046199 880 ESM-RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~-~~~~~gt~~y~APE~l~~ 900 (902)
... .....||+.|+|||++..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~ 186 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKG 186 (294)
T ss_dssp ----------CCSSCCHHHHHT
T ss_pred cccccCccccCccccCHhHhcC
Confidence 322 223569999999998753
No 121
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.95 E-value=5.9e-28 Score=268.43 Aligned_cols=174 Identities=20% Similarity=0.267 Sum_probs=149.2
Q ss_pred HHhhcccccccCeecccceeeEEEEE------eCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC---CCCccceeeee
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGR------FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR---HRNLVKIISSC 791 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 791 (902)
+....++|.+.+.||+|+||.||+|. ...++.||+|+++.. ....+.+|+++++.++ |++|+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 34567899999999999999999994 335889999998754 3456778888888887 99999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC------
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYS----SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD------ 861 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~------ 861 (902)
..++..|+||||+++|+|.+++.. ....+++..+..++.||+.||+||| ++||+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcc
Confidence 999999999999999999999965 3456999999999999999999999 999999999999999998
Q ss_pred -----CCcEEEEeecCceecC--CCccceecccccccccccccccc
Q 046199 862 -----DMVAHLSDFGIAKLLN--GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 862 -----~~~~kL~DFG~a~~~~--~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
++.+||+|||+|+.+. .........+||+.|||||++..
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 259 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN 259 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcC
Confidence 8999999999998654 22333445679999999998754
No 122
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.95 E-value=2.7e-28 Score=270.35 Aligned_cols=174 Identities=32% Similarity=0.369 Sum_probs=143.2
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHH-HHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEV-LKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|..+ ++.++||||+++++++.+.+..
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 345789999999999999999999865 8899999997553 2233556667776 5678999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+...
T Consensus 115 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 9999999999999998654 45889999999999999999999 9999999999999999999999999999998754
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.........+||+.|+|||++..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~ 213 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHK 213 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTT
T ss_pred cCCCccccccCCccccCHHHhCC
Confidence 44444455789999999998754
No 123
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=7.7e-28 Score=261.90 Aligned_cols=173 Identities=27% Similarity=0.442 Sum_probs=136.6
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 35689999999999999999998864 8999999997553 234467889999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 802 EYMANGSLEKCLYSSN-----RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
||++ ++|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999886532 45889999999999999999999 999999999999999999999999999999887
Q ss_pred CCCccceecccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
...........||+.|+|||++..
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~ 182 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMG 182 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTT
T ss_pred CCCcccCCCCcccccccCchHhhC
Confidence 654444445679999999998753
No 124
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.95 E-value=8.4e-28 Score=277.19 Aligned_cols=175 Identities=26% Similarity=0.397 Sum_probs=154.3
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 345789999999999999999999864 8999999997542 233467889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 799 LVLEYMANGSLEKCLYSS---NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
+||||++||+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~ 338 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence 999999999999998654 245899999999999999999999 99999999999999999999999999999998
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+..........+||+.|||||++..
T Consensus 339 ~~~~~~~~~~~~GT~~Y~APE~l~~ 363 (543)
T 3c4z_A 339 LKAGQTKTKGYAGTPGFMAPELLLG 363 (543)
T ss_dssp CCTTCCCBCCCCSCTTTSCHHHHTT
T ss_pred ccCCCcccccccCCccccChhhhcC
Confidence 7655444444689999999999854
No 125
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.95 E-value=1.2e-27 Score=262.35 Aligned_cols=173 Identities=26% Similarity=0.394 Sum_probs=145.0
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCC-------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------- 795 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 795 (902)
.++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 468999999999999999999986 59999999997543 345678999999999999999999999885433
Q ss_pred --------------------------------------------------eeEEEEEccCCCChHHHHhhCCC--CCCHH
Q 046199 796 --------------------------------------------------FKALVLEYMANGSLEKCLYSSNR--SLDIF 823 (902)
Q Consensus 796 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~ 823 (902)
..++||||+++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 38999999999999999976432 35566
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc------------ceeccccccc
Q 046199 824 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES------------MRTQTLGTIG 891 (902)
Q Consensus 824 ~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~------------~~~~~~gt~~ 891 (902)
.+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....... ......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 99999999999999999999999999999988765421 1223569999
Q ss_pred ccccccccc
Q 046199 892 YMAPGLWVV 900 (902)
Q Consensus 892 y~APE~l~~ 900 (902)
|+|||++..
T Consensus 242 y~aPE~~~~ 250 (332)
T 3qd2_B 242 YMSPEQIHG 250 (332)
T ss_dssp GSCHHHHHC
T ss_pred ccChHHhcC
Confidence 999998753
No 126
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.95 E-value=7.3e-28 Score=262.60 Aligned_cols=172 Identities=26% Similarity=0.393 Sum_probs=148.0
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999986 58999999987543 2334678999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc-
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES- 881 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~- 881 (902)
|+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999998854 345899999999999999999999 99999999999999999999999999999986543222
Q ss_pred -ceecccccccccccccccc
Q 046199 882 -MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 -~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~ 181 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKR 181 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHC
T ss_pred cccCCCccCcCccCcHHhcc
Confidence 2234679999999998753
No 127
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.9e-27 Score=259.75 Aligned_cols=170 Identities=26% Similarity=0.388 Sum_probs=149.9
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccch------hhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|+++..... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4679999999999999999999864 899999999754321 356789999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM----VAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kL~DFG~a 873 (902)
|+||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+||+|||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999864 356899999999999999999999 99999999999999999887 8999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+....... .....||+.|+|||++.
T Consensus 166 ~~~~~~~~-~~~~~gt~~y~aPE~~~ 190 (326)
T 2y0a_A 166 HKIDFGNE-FKNIFGTPEFVAPEIVN 190 (326)
T ss_dssp EECCTTSC-CCCCCSCTTTCCHHHHT
T ss_pred eECCCCCc-cccccCCcCcCCceeec
Confidence 88754332 23467999999999875
No 128
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.95 E-value=1.2e-27 Score=276.47 Aligned_cols=174 Identities=26% Similarity=0.374 Sum_probs=153.0
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 45678999999999999999999986 48999999997542 233466889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 799 LVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
+||||++||+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+...
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999986643 34899999999999999999999 9999999999999999999999999999998875
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... ....+||+.|+|||++..
T Consensus 338 ~~~~-~~~~~GT~~Y~APEvl~~ 359 (576)
T 2acx_A 338 EGQT-IKGRVGTVGYMAPEVVKN 359 (576)
T ss_dssp TTCC-EECCCSCGGGCCHHHHTT
T ss_pred cCcc-ccccCCCccccCHHHHcC
Confidence 4432 344689999999998754
No 129
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.5e-26 Score=271.47 Aligned_cols=269 Identities=26% Similarity=0.314 Sum_probs=177.9
Q ss_pred cccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCC
Q 046199 291 PNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSS 370 (902)
Q Consensus 291 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L 370 (902)
.+++.|++++|.++ .+|..+. ++|++|+|++|+|+. +|. .+++|++|+|++|++++.++ .+++|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---------~l~~L 103 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV---------LPPGL 103 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSCCCC---------CCTTC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCcCCC---------CCCCC
Confidence 35888999999988 5565554 788899999998884 444 46888888888888875332 46777
Q ss_pred ceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeeccc
Q 046199 371 KYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLEN 450 (902)
Q Consensus 371 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 450 (902)
++|++++|++.+. |. .+ .+|+.|++++|+|++ +|.. +++|++|+|++|++++ +|. .+.+|+.|++++
T Consensus 104 ~~L~Ls~N~l~~l-~~---~l-~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~ 170 (622)
T 3g06_A 104 LELSIFSNPLTHL-PA---LP-SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYN 170 (622)
T ss_dssp CEEEECSCCCCCC-CC---CC-TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEECcCCcCCCC-CC---CC-CCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCC
Confidence 8888888877753 33 22 377777777777774 3432 3677777777777774 333 235677777777
Q ss_pred ccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCcccc
Q 046199 451 NKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDI 530 (902)
Q Consensus 451 N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 530 (902)
|++++ +|..+.+|+.|++++|++++. |.. +++|+.|++++|+++.+ |.. +++|+.|++++|+|++ +|
T Consensus 171 N~l~~-l~~~~~~L~~L~Ls~N~l~~l-~~~---~~~L~~L~L~~N~l~~l-~~~---~~~L~~L~Ls~N~L~~-lp--- 237 (622)
T 3g06_A 171 NQLTS-LPMLPSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSL-PAL---PSGLKELIVSGNRLTS-LP--- 237 (622)
T ss_dssp SCCSC-CCCCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSC-CC---
T ss_pred CCCCC-CcccCCCCcEEECCCCCCCCC-CCc---cchhhEEECcCCccccc-CCC---CCCCCEEEccCCccCc-CC---
Confidence 77763 555556777777777777653 322 35677777777777653 322 3567777777777765 34
Q ss_pred ccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccccc
Q 046199 531 GNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLV 606 (902)
Q Consensus 531 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 606 (902)
..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++.+|..+..++
T Consensus 238 ~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 238 VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 34466667777777766 3444 4566667777777776 5566666677777777777777766666655544
No 130
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=6e-27 Score=267.13 Aligned_cols=249 Identities=22% Similarity=0.240 Sum_probs=169.6
Q ss_pred cceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCce
Q 046199 293 IERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKY 372 (902)
Q Consensus 293 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~ 372 (902)
...++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------------- 102 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT------------------- 102 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-------------------
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-------------------
Confidence 445566666665 3333332 455566666666655555555555555555555555543
Q ss_pred eeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeeccccc
Q 046199 373 IVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNK 452 (902)
Q Consensus 373 L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 452 (902)
..+..|..++ +|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+
T Consensus 103 ----------i~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 103 ----------IEIGAFNGLA-NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp ----------ECGGGGTTCS-SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT
T ss_pred ----------cChhhccCCc-cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC
Confidence 3334444454 56666666666665555566666677777777777665555566666666666665533
Q ss_pred ccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCcccccc
Q 046199 453 LEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGN 532 (902)
Q Consensus 453 l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 532 (902)
.. ....+..|.++++|+.|+|++|+++.+ | .+..+++|++|++++|++++..|..|.+
T Consensus 172 ~l--------------------~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 229 (440)
T 3zyj_A 172 RL--------------------SYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQG 229 (440)
T ss_dssp TC--------------------CEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTT
T ss_pred Cc--------------------ceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhcc
Confidence 22 223344567777777777777777754 3 4677788888888888888777888888
Q ss_pred ccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccc
Q 046199 533 MKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSG 596 (902)
Q Consensus 533 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 596 (902)
+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.-
T Consensus 230 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 230 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 8888888888888888888888999999999999999998778888899999999999998863
No 131
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=8.2e-28 Score=262.75 Aligned_cols=170 Identities=25% Similarity=0.425 Sum_probs=149.1
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999985 58999999997542 22346789999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||+ +|+|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 67998888654 45899999999999999999999 9999999999999999999999999999998765443
Q ss_pred cceecccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~~ 900 (902)
. ....+||+.|+|||++..
T Consensus 163 ~-~~~~~gt~~y~aPE~~~~ 181 (336)
T 3h4j_B 163 F-LKTSCGSPNYAAPEVING 181 (336)
T ss_dssp T-TCCCTTSTTTSCGGGSCC
T ss_pred c-cccccCCcCcCCHHHHcC
Confidence 2 344679999999999753
No 132
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=4.8e-28 Score=278.71 Aligned_cols=216 Identities=19% Similarity=0.214 Sum_probs=195.8
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNK 473 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~ 473 (902)
+|+.|+|++|.|++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+. .+|+.|++++|.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~--~~L~~L~L~~N~ 110 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG--PSIETLHAANNN 110 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC--TTCCEEECCSSC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC--CCcCEEECcCCc
Confidence 89999999999999888999999999999999999997766 99999999999999999854332 799999999999
Q ss_pred ccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccc-cccccceeccCCccccccCcc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIG-NMKVVVEINLSRNYLTGDIPT 552 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~ 552 (902)
|++..+.. +++|+.|+|++|++++..|..|+.+++|++|++++|.+++..|..+. .+++|++|+|++|.|++..+
T Consensus 111 l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~- 186 (487)
T 3oja_A 111 ISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG- 186 (487)
T ss_dssp CCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-
T ss_pred CCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-
Confidence 99877654 57899999999999999999999999999999999999998888886 79999999999999997633
Q ss_pred ccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCccee
Q 046199 553 TIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 553 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
+..+++|+.|+|++|+|++ +|..|..+++|+.|||++|+|++ +|..+..+++|+.|++++|++.+
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred -cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 4469999999999999997 45559999999999999999995 78889999999999999999983
No 133
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=1.7e-27 Score=263.78 Aligned_cols=172 Identities=25% Similarity=0.442 Sum_probs=150.1
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
..++|++.+.||+|+||.||+|.+.. ++.||+|+++... ....+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35789999999999999999999864 8999999997543 23456789999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---CcEEEEeecCceecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD---MVAHLSDFGIAKLLN 877 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---~~~kL~DFG~a~~~~ 877 (902)
|||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+ +.+||+|||+|+...
T Consensus 107 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999988653 46899999999999999999999 9999999999999999765 459999999998765
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 183 ~~~~-~~~~~gt~~y~aPE~~~~ 204 (362)
T 2bdw_A 183 DSEA-WHGFAGTPGYLSPEVLKK 204 (362)
T ss_dssp TCCS-CCCSCSCTTTCCHHHHTT
T ss_pred CCcc-cccCCCCccccCHHHHcc
Confidence 4332 334679999999998753
No 134
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.6e-28 Score=267.08 Aligned_cols=265 Identities=19% Similarity=0.152 Sum_probs=171.2
Q ss_pred eeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCC
Q 046199 153 ELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEI 232 (902)
Q Consensus 153 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~l 232 (902)
.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.++++
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-------------------- 73 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYET-------------------- 73 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEE--------------------
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcc--------------------
Confidence 334444444322223333444555555555555544444555555555555555553311
Q ss_pred CccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcccc
Q 046199 233 PHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIF 312 (902)
Q Consensus 233 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 312 (902)
..+..+++|++|+|++|++++. | ..++|+.|++++|++++..+. .+++|++|++++|++++..+..+.
T Consensus 74 -~~~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~------~~~~L~~L~l~~N~l~~~~~~~~~ 141 (317)
T 3o53_A 74 -LDLESLSTLRTLDLNNNYVQEL-L----VGPSIETLHAANNNISRVSCS------RGQGKKNIYLANNKITMLRDLDEG 141 (317)
T ss_dssp -EEETTCTTCCEEECCSSEEEEE-E----ECTTCCEEECCSSCCSEEEEC------CCSSCEEEECCSSCCCSGGGBCTG
T ss_pred -hhhhhcCCCCEEECcCCccccc-c----CCCCcCEEECCCCccCCcCcc------ccCCCCEEECCCCCCCCccchhhh
Confidence 1144455555555555555422 1 225566666666666543222 245677777777777766666677
Q ss_pred ccccccEEEccCCcccCccccccc-ccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccc
Q 046199 313 NASKLFLLELTGNSFSGFIPDTLV-NLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNL 391 (902)
Q Consensus 313 ~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 391 (902)
.+++|++|+|++|++++..+..+. .+++|++|++++|++++.. ....+++|++|++++|++.+. |..+..+
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-------~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 142 CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-------GQVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-------CCCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc-------cccccccCCEEECCCCcCCcc-hhhhccc
Confidence 777788888888887776666653 6778888888888877542 233477888888888888754 4457777
Q ss_pred cccccEEEeecCcccccCCcccCCCCCCcEEEeecceec-ccCCcccccccccCeeeccc-ccccCCCCC
Q 046199 392 PITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLS-GSIPITVGRLNTLQGLGLEN-NKLEGPIPD 459 (902)
Q Consensus 392 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~ 459 (902)
+ +|++|+|++|+|++ +|..+..+++|+.|++++|++. +.+|.++..+++|+.|++++ +.++|..|.
T Consensus 214 ~-~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 A-GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp T-TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred C-cccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 7 89999999999994 6778899999999999999998 78888999999999999984 456655444
No 135
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.95 E-value=1.5e-27 Score=260.29 Aligned_cols=172 Identities=27% Similarity=0.405 Sum_probs=147.5
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC----ee
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN----FK 797 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 797 (902)
.+..++|++.+.||+|+||.||+|++. ++.||||+++... .......+|+.++++++||||+++++++.... ..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 456689999999999999999999885 7899999987543 33455667899999999999999999997643 47
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC----------CeEEcCCCCCCEEEcCCCcEEE
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN----------PVVHCDIKPSNILLDDDMVAHL 867 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~----------~ivHrDlkp~NIll~~~~~~kL 867 (902)
|+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 9999999999999999653 4899999999999999999999 88 9999999999999999999999
Q ss_pred EeecCceecCCCccc--eecccccccccccccccc
Q 046199 868 SDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 868 ~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~~ 900 (902)
+|||+|+........ .....||+.|+|||++..
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 207 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred ccCCcccccccccCccccccCccCccccCHhhccc
Confidence 999999877544332 223579999999998753
No 136
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.95 E-value=4.3e-28 Score=270.43 Aligned_cols=176 Identities=26% Similarity=0.397 Sum_probs=152.5
Q ss_pred HHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
+.+..++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++..++..|
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 4566789999999999999999999986 58999999987543 234567889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999999876667899999999999999999999 99999999999999999999999999999987543
Q ss_pred Ccccee--ccccccccccccccc
Q 046199 879 EESMRT--QTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~~~--~~~gt~~y~APE~l~ 899 (902)
...... ...+++.|+|||++.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~ 288 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALN 288 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHH
T ss_pred CceeecCCCCCCCcCcCCHhHhc
Confidence 322111 123577899999874
No 137
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=264.48 Aligned_cols=167 Identities=25% Similarity=0.406 Sum_probs=143.3
Q ss_pred cccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEccCCC
Q 046199 729 SEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEYMANG 807 (902)
Q Consensus 729 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (902)
...+.||+|+||.||+|++. +++.||+|+++.......+.+.+|++++++++||||+++++++.+.+..|+||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33678999999999999885 48999999998766566788999999999999999999999999999999999999999
Q ss_pred ChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE--cCCCcEEEEeecCceecCCCccceec
Q 046199 808 SLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL--DDDMVAHLSDFGIAKLLNGEESMRTQ 885 (902)
Q Consensus 808 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll--~~~~~~kL~DFG~a~~~~~~~~~~~~ 885 (902)
+|.+++......+++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++....... ...
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-~~~ 247 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKV 247 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-CCC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-ccc
Confidence 999998776667999999999999999999999 9999999999999999 5678999999999998754433 233
Q ss_pred cccccccccccccc
Q 046199 886 TLGTIGYMAPGLWV 899 (902)
Q Consensus 886 ~~gt~~y~APE~l~ 899 (902)
..||+.|+|||++.
T Consensus 248 ~~gt~~y~aPE~~~ 261 (373)
T 2x4f_A 248 NFGTPEFLAPEVVN 261 (373)
T ss_dssp CCSSCTTCCHHHHT
T ss_pred ccCCCcEeChhhcc
Confidence 57999999999874
No 138
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=7e-28 Score=257.87 Aligned_cols=176 Identities=26% Similarity=0.415 Sum_probs=151.5
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
.+.+..++|++.+.||+|+||.||+|++.++..||+|+++.... ..+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 44567789999999999999999999998888999999975533 34678999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999999775667999999999999999999999 999999999999999999999999999999866443
Q ss_pred ccc-eeccccccccccccccc
Q 046199 880 ESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~~-~~~~~gt~~y~APE~l~ 899 (902)
... .....+|+.|+|||++.
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~ 194 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLM 194 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHH
T ss_pred ccccccCCccCcccCCHHHhc
Confidence 221 12245778899999875
No 139
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=253.20 Aligned_cols=173 Identities=27% Similarity=0.475 Sum_probs=137.8
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3468999999999999999999985 58999999997542 2234678999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999876677999999999999999999999 999999999999999999999999999999877544
Q ss_pred ccceeccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~ 899 (902)
........||+.|+|||++.
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~ 185 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIAT 185 (278)
T ss_dssp --------------------
T ss_pred CCcceeccCCCCcCCcchhc
Confidence 43334467999999999875
No 140
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.95 E-value=2.4e-27 Score=270.40 Aligned_cols=172 Identities=28% Similarity=0.480 Sum_probs=152.3
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4578999999999999999999986 59999999997542 2234678999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 94 v~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 94 VMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999864 356899999999999999999999 999999999999999999999999999999887543
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
. .....+||+.|+|||++..
T Consensus 170 ~-~~~~~~gt~~y~aPE~~~~ 189 (476)
T 2y94_A 170 E-FLRTSCGSPNYAAPEVISG 189 (476)
T ss_dssp C-CBCCCCSCSTTCCHHHHTT
T ss_pred c-cccccCCCcCeEChhhccC
Confidence 3 2344679999999998753
No 141
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=1.9e-27 Score=260.54 Aligned_cols=171 Identities=26% Similarity=0.373 Sum_probs=149.9
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||||++.... ..+.+.+|+++++.+ +||||+++++++..++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 3578999999999999999999974 58999999987543 235788999999999 8999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-----EEEEeecCceec
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV-----AHLSDFGIAKLL 876 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~-----~kL~DFG~a~~~ 876 (902)
||+ +++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||+|+..
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999 89999999876678999999999999999999999 999999999999999998887 999999999876
Q ss_pred CCCccc-------eecccccccccccccccc
Q 046199 877 NGEESM-------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~-------~~~~~gt~~y~APE~l~~ 900 (902)
...... .....||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 191 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLG 191 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcC
Confidence 543321 134679999999998754
No 142
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=259.48 Aligned_cols=171 Identities=31% Similarity=0.337 Sum_probs=143.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--hhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||+||+|++. +++.||||++..... ........|+..+..+ +||||+++++++.+++..|+
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3468999999999999999999987 599999999865432 2334455566555555 89999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 66999998777777999999999999999999999 999999999999999999999999999999876543
Q ss_pred ccceeccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~ 899 (902)
.. .....||+.|+|||++.
T Consensus 211 ~~-~~~~~gt~~y~aPE~~~ 229 (311)
T 3p1a_A 211 GA-GEVQEGDPRYMAPELLQ 229 (311)
T ss_dssp -----CCCCCGGGCCGGGGG
T ss_pred CC-CcccCCCccccCHhHhc
Confidence 32 33456999999999875
No 143
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.95 E-value=6.9e-28 Score=259.56 Aligned_cols=174 Identities=28% Similarity=0.485 Sum_probs=147.4
Q ss_pred hhcccccccCeecccceeeEEEEEe-----CCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecC--C
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG--N 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 795 (902)
...++|++.+.||+|+||.||+|++ .+++.||||+++.......+.+.+|++++++++||||+++++++... .
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 4568999999999999999999984 24889999999876666678899999999999999999999998543 5
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 689999999999999999877667999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccc---eeccccccccccccccc
Q 046199 876 LNGEESM---RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~---~~~~~gt~~y~APE~l~ 899 (902)
....... .....+++.|+|||++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 190 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLT 190 (295)
T ss_dssp ------------CTTCGGGGCCHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhc
Confidence 6543321 22245778899999874
No 144
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95 E-value=5.4e-28 Score=276.09 Aligned_cols=175 Identities=27% Similarity=0.325 Sum_probs=142.4
Q ss_pred HhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeec---cchhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQ---FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
....++|++.+.||+|+||.||+|++.. ++.||+|+++.. .......+.+|+++++.++||||+++++++...+..
T Consensus 144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 223 (446)
T 4ejn_A 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223 (446)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence 3456789999999999999999999864 899999999754 233446678899999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYS-NPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~-~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
|+||||+++|+|.+++... ..+++..+..++.||+.||+||| + +||+||||||+||+++.++.+||+|||+|+..
T Consensus 224 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EEEECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEEEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999988654 46899999999999999999999 8 89999999999999999999999999999865
Q ss_pred CCCccceecccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..........+||+.|+|||++..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~ 323 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLED 323 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHT
T ss_pred cCCCcccccccCCccccCHhhcCC
Confidence 544444455789999999998753
No 145
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=9.4e-28 Score=266.91 Aligned_cols=174 Identities=25% Similarity=0.486 Sum_probs=140.8
Q ss_pred hhcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
+..++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 34578999999999999999999875 46789999997653 34457899999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||+++|+|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999999877677999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCcccee---ccccccccccccccc
Q 046199 878 GEESMRT---QTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~~---~~~gt~~y~APE~l~ 899 (902)
....... ...+++.|+|||++.
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~ 223 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIA 223 (373)
T ss_dssp ---------------CTTSCHHHHH
T ss_pred cCCccceeccCCCcCCCccChhhhc
Confidence 4332211 123577899999875
No 146
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.94 E-value=3.2e-27 Score=257.43 Aligned_cols=172 Identities=31% Similarity=0.455 Sum_probs=149.1
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCC--eeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--FKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 799 (902)
..++|++.+.||+|+||.||+|++.. ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..|+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 35789999999999999999999865 8999999997543 234577889999999999999999999987655 7899
Q ss_pred EEEccCCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEEEEeecCc
Q 046199 800 VLEYMANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL----DDDMVAHLSDFGIA 873 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~~kL~DFG~a 873 (902)
||||+++++|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+|
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999976432 3899999999999999999999 9999999999999999 77888999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+....... .....||+.|+|||++.
T Consensus 164 ~~~~~~~~-~~~~~gt~~y~aPE~~~ 188 (319)
T 4euu_A 164 RELEDDEQ-FVSLYGTEEYLHPDMYE 188 (319)
T ss_dssp EECCTTCC-BCCCCSCGGGCCHHHHH
T ss_pred eecCCCCc-eeecccCCCccCHHHhh
Confidence 88765433 23467999999999874
No 147
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.94 E-value=1.5e-27 Score=264.59 Aligned_cols=183 Identities=22% Similarity=0.376 Sum_probs=154.8
Q ss_pred cccCHHHHHhhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCcc
Q 046199 714 RRFSYRELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLV 785 (902)
Q Consensus 714 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 785 (902)
..+...++.+..++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 44667788899999999999999999999999742 36789999997643 33456799999999999 799999
Q ss_pred ceeeeeecCC-eeEEEEEccCCCChHHHHhhCCC----------------------------------------------
Q 046199 786 KIISSCSNGN-FKALVLEYMANGSLEKCLYSSNR---------------------------------------------- 818 (902)
Q Consensus 786 ~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------- 818 (902)
++++++.+.+ ..++||||+++|+|.+++.....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999987754 58999999999999999976432
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 819 -------------------SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 819 -------------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 1888999999999999999999 999999999999999999999999999999876443
Q ss_pred cc--ceeccccccccccccccc
Q 046199 880 ES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~--~~~~~~gt~~y~APE~l~ 899 (902)
.. ......||+.|+|||++.
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~ 268 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIF 268 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHH
T ss_pred ccchhccccCCCceeEChhhhc
Confidence 32 223356899999999874
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.94 E-value=3.5e-27 Score=257.39 Aligned_cols=167 Identities=26% Similarity=0.340 Sum_probs=128.6
Q ss_pred ccccc---CeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEE
Q 046199 727 HFSEK---SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 727 ~y~~~---~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (902)
+|++. +.||+|+||.||+|++.. ++.||||++... ....+.+|+.+++.+. ||||+++++++.+++..|+||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 45543 789999999999999864 899999998643 3467789999999997 999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM---VAHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kL~DFG~a~~~~~ 878 (902)
||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 999999999999764 56899999999999999999999 99999999999999998766 899999999987765
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
........+||+.|+|||++..
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~ 183 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQ 183 (325)
T ss_dssp ----------------------
T ss_pred CCCcccccCCCcCccCHHHhcC
Confidence 5544555778999999998753
No 149
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.94 E-value=4.8e-27 Score=250.48 Aligned_cols=170 Identities=27% Similarity=0.377 Sum_probs=152.0
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.++|++.+.||+|+||.||+|++.. +..||+|++........+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4689999999999999999999865 779999999876656678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceecCCCc
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~~~ 880 (902)
+++++|.+++... ..+++..+..++.|++.|++||| ++||+||||||+||++ +.++.+||+|||.+.......
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999988654 45899999999999999999999 9999999999999999 788899999999998776443
Q ss_pred cceeccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~ 899 (902)
. .....||+.|+|||++.
T Consensus 164 ~-~~~~~~t~~y~aPE~~~ 181 (277)
T 3f3z_A 164 M-MRTKVGTPYYVSPQVLE 181 (277)
T ss_dssp C-BCCCCSCTTTCCHHHHT
T ss_pred c-hhccCCCCCccChHHhc
Confidence 3 33467999999999864
No 150
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.94 E-value=2.5e-27 Score=262.40 Aligned_cols=172 Identities=24% Similarity=0.294 Sum_probs=141.9
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 34678999999999999999999986 58999999997543 23467889999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--EEEEeecCceecCCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV--AHLSDFGIAKLLNGE 879 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--~kL~DFG~a~~~~~~ 879 (902)
||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+.....
T Consensus 96 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 96 EYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 999999999998654 45899999999999999999999 999999999999999987765 999999999754332
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
. ......||+.|+|||++..
T Consensus 172 ~-~~~~~~gt~~y~aPE~~~~ 191 (361)
T 3uc3_A 172 S-QPKSTVGTPAYIAPEVLLR 191 (361)
T ss_dssp ----------CTTSCHHHHHC
T ss_pred C-CCCCCcCCCCcCChhhhcC
Confidence 2 2234579999999998753
No 151
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.94 E-value=4.1e-27 Score=255.60 Aligned_cols=171 Identities=32% Similarity=0.429 Sum_probs=143.7
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 3689999999999999999999865 89999999865432 23567889999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||++++++.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.|........
T Consensus 82 e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999887754 456899999999999999999999 99999999999999999999999999999988765554
Q ss_pred ceeccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~ 899 (902)
......||+.|+|||++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~ 175 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLV 175 (311)
T ss_dssp --------GGGCCHHHHH
T ss_pred ccCCCcCCccccChHHHh
Confidence 445567999999999875
No 152
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=2.7e-28 Score=268.01 Aligned_cols=168 Identities=20% Similarity=0.226 Sum_probs=138.7
Q ss_pred hhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc--------hhhhhHHHHHHHHHhCC---------CCCcc
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--------GALKSFDAECEVLKSVR---------HRNLV 785 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv 785 (902)
...++|++.+.||+|+||.||+|++ +++.||||+++.... ...+.+.+|+++++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4467899999999999999999998 789999999986532 23377889999998886 55555
Q ss_pred ceee-----------------eeec-------------CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 046199 786 KIIS-----------------SCSN-------------GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALA 835 (902)
Q Consensus 786 ~l~~-----------------~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 835 (902)
++.+ ++.+ ++..|+||||+++|++.+.+.+ ..+++..+..++.||+.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 5544 4443 6889999999999976666633 458999999999999999
Q ss_pred HHHHHccCCCCeEEcCCCCCCEEEcCCC--------------------cEEEEeecCceecCCCccceeccccccccccc
Q 046199 836 LEYLHFGYSNPVVHCDIKPSNILLDDDM--------------------VAHLSDFGIAKLLNGEESMRTQTLGTIGYMAP 895 (902)
Q Consensus 836 L~~LH~~~~~~ivHrDlkp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~AP 895 (902)
|+|||. ++||+||||||+|||++.++ .+||+|||+|+..... ..+||+.||||
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 999992 47999999999999999887 8999999999876532 24799999999
Q ss_pred ccccc
Q 046199 896 GLWVV 900 (902)
Q Consensus 896 E~l~~ 900 (902)
|++..
T Consensus 247 E~~~g 251 (336)
T 2vuw_A 247 DLFTG 251 (336)
T ss_dssp GGGCC
T ss_pred hhhcC
Confidence 99864
No 153
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.94 E-value=2.6e-27 Score=271.66 Aligned_cols=170 Identities=26% Similarity=0.374 Sum_probs=134.5
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec-----CCe
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN-----GNF 796 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 796 (902)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+++.+|+++++.++||||+++++++.. .+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999886 48999999986543 2345788999999999999999999999843 357
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||++ ++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999984 699998854 456999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCcc---------------------------ceeccccccccccccccc
Q 046199 877 NGEES---------------------------MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~---------------------------~~~~~~gt~~y~APE~l~ 899 (902)
..... ..+..+||+.|||||++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 256 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence 43211 123357899999999864
No 154
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=260.73 Aligned_cols=171 Identities=25% Similarity=0.423 Sum_probs=141.8
Q ss_pred ccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999986 589999999875432 2223556799999999999999999999999999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccce
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMR 883 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 883 (902)
+++ +|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 974 999998877777999999999999999999999 9999999999999999999999999999998765444444
Q ss_pred ecccccccccccccccc
Q 046199 884 TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 884 ~~~~gt~~y~APE~l~~ 900 (902)
....||+.|+|||++..
T Consensus 158 ~~~~~t~~y~aPE~~~~ 174 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLG 174 (324)
T ss_dssp -----CGGGCCHHHHTT
T ss_pred ccccCcccccChhhhcC
Confidence 45678999999998753
No 155
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.94 E-value=4.1e-27 Score=280.83 Aligned_cols=175 Identities=22% Similarity=0.282 Sum_probs=152.5
Q ss_pred HhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCe
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNF 796 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 796 (902)
....++|++.+.||+|+||.||+|++.. ++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 3456789999999999999999999865 8889999997542 33456788899999988 79999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999999764 45899999999999999999999 999999999999999999999999999999875
Q ss_pred CCCccceecccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..........+||+.|||||++..
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~ 516 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAY 516 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTC
T ss_pred ccCCcccccccCCCcccCHhhhcC
Confidence 544444555789999999999853
No 156
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.94 E-value=1.3e-27 Score=256.51 Aligned_cols=171 Identities=25% Similarity=0.387 Sum_probs=151.0
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-C-------cEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-G-------MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG 794 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 794 (902)
+..++|++.+.||+|+||.||+|++.. + +.||+|+++.......+.+.+|++++++++||||+++++++..+
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 345789999999999999999998754 3 57999999776666678899999999999999999999999999
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--------EE
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV--------AH 866 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--------~k 866 (902)
+..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +|
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceee
Confidence 9999999999999999999877666999999999999999999999 999999999999999998887 99
Q ss_pred EEeecCceecCCCccceecccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|+|||.+...... ....||+.|+|||++..
T Consensus 162 l~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 191 (289)
T 4fvq_A 162 LSDPGISITVLPK----DILQERIPWVPPECIEN 191 (289)
T ss_dssp ECCCCSCTTTSCH----HHHHHTTTTSCHHHHHC
T ss_pred eccCcccccccCc----cccCCcCcccCHHHhCC
Confidence 9999998754322 22458899999998753
No 157
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.94 E-value=3.9e-27 Score=258.48 Aligned_cols=169 Identities=28% Similarity=0.436 Sum_probs=146.2
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 800 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+|++++.++ +||||+++++++.+++..|+|
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 345789999999999999999999864 8899999997543 2345788888888 799999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCceec
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD----MVAHLSDFGIAKLL 876 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~~~ 876 (902)
|||++||+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||++.++ +.+||+|||+++..
T Consensus 95 ~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 95 TELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp ECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999998654 56899999999999999999999 9999999999999998443 35999999999987
Q ss_pred CCCccceeccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
..........+||+.|+|||++.
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~ 193 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLE 193 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHH
T ss_pred cCCCCceeccCCCccccCHHHhc
Confidence 65554445578999999999874
No 158
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.94 E-value=6.5e-27 Score=262.40 Aligned_cols=175 Identities=21% Similarity=0.271 Sum_probs=151.9
Q ss_pred hhcccccccCeeccc--ceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIG--SFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+| +||.||+|++. +++.||||+++... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 456789999999999 99999999986 48999999997653 33457788999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 798 ALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
|+||||+++|+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999998764 356899999999999999999999 999999999999999999999999999998754
Q ss_pred CCCcc-------ceecccccccccccccccc
Q 046199 877 NGEES-------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~-------~~~~~~gt~~y~APE~l~~ 900 (902)
..... ......||+.|+|||++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 209 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred ccccccccccccccccccccccccCHHHHhc
Confidence 32211 1122478999999999864
No 159
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.94 E-value=3.4e-27 Score=258.63 Aligned_cols=172 Identities=28% Similarity=0.383 Sum_probs=149.9
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--------hhhhhHHHHHHHHHhCCCCCccceeeeeecC
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--------GALKSFDAECEVLKSVRHRNLVKIISSCSNG 794 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 794 (902)
..++|++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3568999999999999999999875 488999999975531 2345678899999999999999999999999
Q ss_pred CeeEEEEEccCCC-ChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 795 NFKALVLEYMANG-SLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 795 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 999988654 46899999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCccceecccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+....... .....||+.|+|||++..
T Consensus 178 ~~~~~~~~-~~~~~gt~~y~aPE~~~~ 203 (335)
T 3dls_A 178 AYLERGKL-FYTFCGTIEYCAPEVLMG 203 (335)
T ss_dssp EECCTTCC-BCEECSCGGGCCHHHHTT
T ss_pred eECCCCCc-eeccCCCccccChhhhcC
Confidence 88755433 334679999999998753
No 160
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=1.7e-27 Score=252.43 Aligned_cols=174 Identities=26% Similarity=0.412 Sum_probs=153.2
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.+..++|++.+.||+|+||.||+|++.+++.||+|+++.... ..+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 455689999999999999999999998889999999976533 3467899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++.......
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999999999877677899999999999999999999 99999999999999999999999999999986643221
Q ss_pred c-eeccccccccccccccc
Q 046199 882 M-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 882 ~-~~~~~gt~~y~APE~l~ 899 (902)
. .....+++.|+|||++.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~ 178 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFS 178 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHH
T ss_pred cccccccccccccChhhhc
Confidence 1 12245788999999874
No 161
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94 E-value=9.9e-27 Score=250.39 Aligned_cols=173 Identities=22% Similarity=0.345 Sum_probs=152.6
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++.+ ++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 45789999999999999999999865 8899999987542 2345778899999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 93 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999988653 45899999999999999999999 999999999999999999999999999999887644
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
........||+.|+|||++..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~ 189 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSK 189 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTT
T ss_pred ccccccccCCCCcCCcchhcc
Confidence 444445679999999998753
No 162
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.4e-27 Score=261.43 Aligned_cols=173 Identities=29% Similarity=0.448 Sum_probs=145.7
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc-----hhhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 345789999999999999999999864 89999999875322 123578899999999999999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.++||||+++ ++.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 899988776667899999999999999999999 999999999999999999999999999999877
Q ss_pred CCCccceeccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
...........||+.|+|||++.
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~ 185 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLF 185 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHT
T ss_pred cCCcccCCcccccccccCchHhh
Confidence 65544445567999999999874
No 163
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.94 E-value=5.1e-27 Score=266.59 Aligned_cols=171 Identities=27% Similarity=0.381 Sum_probs=144.9
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecC-----C
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----N 795 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 795 (902)
..++|++.+.||+|+||.||+|++.. ++.||||+++... ....+++.+|+++++.++||||+++++++... +
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 35789999999999999999999865 8889999997543 23457889999999999999999999999766 5
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||++ ++|.+++.. ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 7899999996 599998864 456899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCcc----------------------ceeccccccccccccccc
Q 046199 876 LNGEES----------------------MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~----------------------~~~~~~gt~~y~APE~l~ 899 (902)
...... ..+..+||+.|+|||++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 224 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHT
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence 654321 124467999999999864
No 164
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.94 E-value=2.2e-27 Score=261.50 Aligned_cols=178 Identities=26% Similarity=0.426 Sum_probs=152.4
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeCC------CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeee
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSC 791 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 791 (902)
..+....++|++.+.||+|+||.||+|++.+ ++.||+|+++... ....+.+.+|+++++.++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3455677899999999999999999998753 4789999997653 33457899999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeE
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSN-----------------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVV 848 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iv 848 (902)
.+++..|+||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 99999999999999999999997642 46899999999999999999999 99999
Q ss_pred EcCCCCCCEEEcCCCcEEEEeecCceecCCCcc--ceeccccccccccccccc
Q 046199 849 HCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 849 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~APE~l~ 899 (902)
||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 249 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 249 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence 999999999999999999999999987643321 122356889999999874
No 165
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.94 E-value=8.4e-27 Score=255.80 Aligned_cols=173 Identities=22% Similarity=0.345 Sum_probs=152.9
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|.+.+.||+|+||.||+|++.+ ++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 35789999999999999999999865 7899999987542 2345778899999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 119 v~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999988654 46899999999999999999999 999999999999999999999999999999887644
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
........||+.|+|||++..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~ 215 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSK 215 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHT
T ss_pred cccccccCCCccccCHHHhcc
Confidence 444445679999999998753
No 166
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.94 E-value=6e-27 Score=253.12 Aligned_cols=173 Identities=24% Similarity=0.462 Sum_probs=148.2
Q ss_pred hcccccccCeecccceeeEEEEEe-----CCCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecC--C
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG--N 795 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 795 (902)
..++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++.++||||+++++++... .
T Consensus 19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 356799999999999999999983 348899999997543 33457889999999999999999999999876 6
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++..
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 689999999999999999776677999999999999999999999 99999999999999999999999999999988
Q ss_pred cCCCccc---eeccccccccccccccc
Q 046199 876 LNGEESM---RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~---~~~~~gt~~y~APE~l~ 899 (902)
....... .....||+.|+|||++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 202 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLM 202 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeec
Confidence 7654422 22356888999999874
No 167
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.94 E-value=4.3e-27 Score=262.96 Aligned_cols=176 Identities=25% Similarity=0.436 Sum_probs=151.4
Q ss_pred HhhcccccccCeecccceeeEEEEEeC--------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCccceeeee
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSC 791 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 791 (902)
.+..++|++.+.||+|+||.||+|++. .+..||+|+++... ....+.+.+|+++++.+ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 456689999999999999999999863 24579999997653 33457889999999999 899999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCC
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSN---------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSN 856 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~N 856 (902)
..++..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence 99999999999999999999997653 35899999999999999999999 9999999999999
Q ss_pred EEEcCCCcEEEEeecCceecCCCccc--eecccccccccccccccc
Q 046199 857 ILLDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 857 Ill~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~~ 900 (902)
|+++.++.+||+|||+|+........ .....+|+.|+|||++..
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 267 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD 267 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC
Confidence 99999999999999999876543322 223457889999998753
No 168
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.94 E-value=2.1e-26 Score=249.40 Aligned_cols=183 Identities=36% Similarity=0.557 Sum_probs=158.6
Q ss_pred ccccCHHHHHhhccccccc------CeecccceeeEEEEEeCCCcEEEEEEeeecc----chhhhhHHHHHHHHHhCCCC
Q 046199 713 WRRFSYRELLLATDHFSEK------SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHR 782 (902)
Q Consensus 713 ~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 782 (902)
...+++.++..++++|... +.||+|+||.||+|++ +++.||+|++.... ....+.+.+|+.+++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568888998888888777 8999999999999987 68899999986532 33457889999999999999
Q ss_pred CccceeeeeecCCeeEEEEEccCCCChHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc
Q 046199 783 NLVKIISSCSNGNFKALVLEYMANGSLEKCLYSS--NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD 860 (902)
Q Consensus 783 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (902)
||+++++++.+.+..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998643 345899999999999999999999 99999999999999999
Q ss_pred CCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 861 DDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 861 ~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
.++.+||+|||+++........ .....||+.|+|||++.
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 208 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR 208 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence 9999999999999876543322 22356999999999864
No 169
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=4.6e-27 Score=259.08 Aligned_cols=177 Identities=23% Similarity=0.407 Sum_probs=149.7
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCccceeeee
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSC 791 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 791 (902)
++.+..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 35667789999999999999999999862 35689999997543 33457899999999999 899999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEE
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSNR----------------------SLDIFQRLSIMIDVALALEYLHFGYSNPVVH 849 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 849 (902)
...+..|+||||+++|+|.+++..... .+++..+..++.||+.||+||| ++||+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 999999999999999999999976543 2788999999999999999999 999999
Q ss_pred cCCCCCCEEEcCCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 850 CDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 850 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
|||||+||+++.++.+||+|||++......... .....||+.|+|||++.
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 247 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 247 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence 999999999999999999999999876443322 22356788999999874
No 170
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.94 E-value=2.2e-27 Score=253.76 Aligned_cols=174 Identities=26% Similarity=0.387 Sum_probs=138.9
Q ss_pred HhhcccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
.+..++|++.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. ++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 4556899999999999999999998753 4579999886543 334578899999999999999999999985 456
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 89999999999999999877667999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccc-eeccccccccccccccc
Q 046199 877 NGEESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~-~~~~~gt~~y~APE~l~ 899 (902)
...... .....+|+.|+|||++.
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~ 190 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESIN 190 (281)
T ss_dssp ------------CCGGGCCHHHHH
T ss_pred CcccccccccCCCcccccChhhcc
Confidence 543322 12245778999999874
No 171
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.94 E-value=1.4e-27 Score=259.28 Aligned_cols=173 Identities=23% Similarity=0.418 Sum_probs=140.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCC----
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN---- 795 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 795 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 3578999999999999999999984 58999999997643 233467889999999999999999999987654
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 349999999999999998654 45899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccc---eecccccccccccccccc
Q 046199 876 LNGEESM---RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~---~~~~~gt~~y~APE~l~~ 900 (902)
....... .....||+.|+|||++..
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 193 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARG 193 (311)
T ss_dssp ----------------CCTTCCHHHHHT
T ss_pred ccccccccccccccCcCcccCCHHHhcC
Confidence 6543221 223568999999998753
No 172
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.94 E-value=5.5e-27 Score=258.47 Aligned_cols=170 Identities=27% Similarity=0.392 Sum_probs=133.6
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 45789999999999999999999865 8899999997543 34678899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCceecCCC
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a~~~~~~ 879 (902)
|+++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999998654 45899999999999999999999 999999999999999975 889999999999876443
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
. ......||+.|+|||++..
T Consensus 205 ~-~~~~~~gt~~y~aPE~~~~ 224 (349)
T 2w4o_A 205 V-LMKTVCGTPGYCAPEILRG 224 (349)
T ss_dssp ---------CGGGSCHHHHTT
T ss_pred c-ccccccCCCCccCHHHhcC
Confidence 2 2234679999999998754
No 173
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=7.1e-27 Score=259.30 Aligned_cols=181 Identities=27% Similarity=0.366 Sum_probs=156.8
Q ss_pred cccccCHHHHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-----CCCcc
Q 046199 712 MWRRFSYRELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-----HRNLV 785 (902)
Q Consensus 712 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 785 (902)
....+++++.....++|++.+.||+|+||.||+|++. +++.||||+++.. ....+.+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 3456777777788899999999999999999999985 4889999998743 334567788999999996 99999
Q ss_pred ceeeeeecCCeeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---
Q 046199 786 KIISSCSNGNFKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD--- 861 (902)
Q Consensus 786 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--- 861 (902)
++++++...+..|+||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccc
Confidence 9999999999999999999 889999987654 35899999999999999999999 999999999999999975
Q ss_pred ----------------------CCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 862 ----------------------DMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 862 ----------------------~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
++.+||+|||+|+...... ....||+.|+|||++..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~ 233 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---GSIINTRQYRAPEVILN 233 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---CSCCSCGGGCCHHHHTT
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC---cCccCcccccCcHHHcC
Confidence 7899999999998754322 34679999999998764
No 174
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=5.3e-27 Score=258.23 Aligned_cols=167 Identities=30% Similarity=0.423 Sum_probs=147.2
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
.+.|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++..++..|+|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 356899999999999999999974 58999999997543 23346788999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||++ |++.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 99997 5888888666677999999999999999999999 999999999999999999999999999999875432
Q ss_pred cceeccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~ 899 (902)
....||+.|+|||++.
T Consensus 208 ---~~~~gt~~y~aPE~~~ 223 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVIL 223 (348)
T ss_dssp ---CCCCSCGGGCCHHHHH
T ss_pred ---CcccCCcceeCHhhhc
Confidence 2357999999999874
No 175
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.94 E-value=5e-27 Score=255.24 Aligned_cols=176 Identities=26% Similarity=0.396 Sum_probs=151.5
Q ss_pred HHhhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeec
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSN 793 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 793 (902)
+....++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 3456789999999999999999999862 35789999997543 3445788999999999999999999999999
Q ss_pred CCeeEEEEEccCCCChHHHHhhCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 046199 794 GNFKALVLEYMANGSLEKCLYSSNR-----------------------SLDIFQRLSIMIDVALALEYLHFGYSNPVVHC 850 (902)
Q Consensus 794 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHr 850 (902)
++..++||||+++++|.+++..... .+++..+..++.|++.||+||| ++||+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccc
Confidence 9999999999999999999976432 3789999999999999999999 9999999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCceecCCCccce--eccccccccccccccc
Q 046199 851 DIKPSNILLDDDMVAHLSDFGIAKLLNGEESMR--TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 851 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~gt~~y~APE~l~ 899 (902)
||||+||+++.++.+||+|||+++......... ....+|+.|+|||++.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 225 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF 225 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc
Confidence 999999999999999999999998775443322 2245788999999874
No 176
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94 E-value=1.3e-26 Score=252.71 Aligned_cols=170 Identities=27% Similarity=0.406 Sum_probs=150.0
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccch------hhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|+++..... ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4689999999999999999999864 899999999754321 356789999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM----VAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kL~DFG~a 873 (902)
|+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999865 456899999999999999999999 99999999999999999888 7999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+....... .....||+.|+|||++.
T Consensus 167 ~~~~~~~~-~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 167 HEIEDGVE-FKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp EECCTTCC-CCCCCSCGGGCCHHHHT
T ss_pred eecCcccc-ccccCCCCCccCccccc
Confidence 87754332 23457999999999875
No 177
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.94 E-value=7.7e-27 Score=255.35 Aligned_cols=174 Identities=28% Similarity=0.405 Sum_probs=151.8
Q ss_pred hhcccccccCeecccceeeEEEEEe-----CCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeee--cCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS--NGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~ 795 (902)
+..++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. ..+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 3457899999999999999999984 348899999998776666778999999999999999999999886 456
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred eEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccccee
Confidence 789999999999999999775566999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccc---eeccccccccccccccc
Q 046199 876 LNGEESM---RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~---~~~~~gt~~y~APE~l~ 899 (902)
....... .....||+.|+|||++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 203 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLS 203 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhc
Confidence 7544332 12245888899999874
No 178
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.94 E-value=2.5e-27 Score=256.05 Aligned_cols=173 Identities=25% Similarity=0.395 Sum_probs=147.2
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|++........+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 45789999999999999999999864 89999999976665667889999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccc
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM 882 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 882 (902)
|+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.........
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999998776677999999999999999999999 999999999999999999999999999987643222222
Q ss_pred eeccccccccccccccc
Q 046199 883 RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 883 ~~~~~gt~~y~APE~l~ 899 (902)
.....||+.|+|||++.
T Consensus 174 ~~~~~~~~~y~aPE~~~ 190 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVM 190 (302)
T ss_dssp -----CCGGGCCHHHHH
T ss_pred cccccCChhhcCCeeec
Confidence 23356899999999873
No 179
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=251.04 Aligned_cols=173 Identities=30% Similarity=0.405 Sum_probs=148.5
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ..+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 456789999999999999999999865 8999999987543 3467899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 999999999999766677999999999999999999999 99999999999999999999999999999988765544
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 181 ~~~~~~~~~~y~aPE~~~~ 199 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQE 199 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSS
T ss_pred ccCccCCCCCccChhhcCC
Confidence 4445679999999998753
No 180
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.1e-26 Score=243.03 Aligned_cols=217 Identities=27% Similarity=0.362 Sum_probs=128.7
Q ss_pred CCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCC
Q 046199 29 TSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSF 108 (902)
Q Consensus 29 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 108 (902)
.|+|.|.|+.|.... .++.+++++++++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.++ .+
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-ee
Confidence 589999999987654 3568999999998 5777655 67899999999998555557889999999999999987 44
Q ss_pred CcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCC
Q 046199 109 PSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGT 188 (902)
Q Consensus 109 ~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 188 (902)
|...+.++++|++|++++|++++. .|..++.+++|++|+|++|++++..|..|+.+++|++|+|++|.+++.
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 148 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQAL--------PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCC--------CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcC--------CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc
Confidence 444445555555555555555421 122334455555555555555544444455555555555555555533
Q ss_pred CChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCce
Q 046199 189 IPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKA 268 (902)
Q Consensus 189 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (902)
.+..|..+++|++|+|++|.++.+ | +..|..+++|++|+|++|++++..+..+..+++|+.
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~-----------~--------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRV-----------P--------EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCC-----------C--------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CHhHccCCcccceeEecCCcCcEe-----------C--------hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCE
Confidence 333345555555555555544321 1 123444455555555555554333333444444444
Q ss_pred EeccCcccc
Q 046199 269 LSLLNNTLS 277 (902)
Q Consensus 269 L~Ls~N~l~ 277 (902)
|+|++|.+.
T Consensus 210 L~l~~N~~~ 218 (270)
T 2o6q_A 210 LQLQENPWD 218 (270)
T ss_dssp EECCSSCBC
T ss_pred EEecCCCee
Confidence 444444443
No 181
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.94 E-value=2.6e-26 Score=247.51 Aligned_cols=172 Identities=23% Similarity=0.318 Sum_probs=150.5
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 800 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+++++.+ +|++++++++++......++|
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 34678999999999999999999974 58999999986543 346788999999999 799999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-----EEEEeecCcee
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV-----AHLSDFGIAKL 875 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~-----~kL~DFG~a~~ 875 (902)
|||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+.
T Consensus 85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 9999 99999999877777999999999999999999999 999999999999999987776 99999999987
Q ss_pred cCCCccc-------eecccccccccccccccc
Q 046199 876 LNGEESM-------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~-------~~~~~gt~~y~APE~l~~ 900 (902)
....... .....||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 192 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLG 192 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred cccccccccccccCccCCCCCcccCCchhhcC
Confidence 7544321 233579999999998753
No 182
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94 E-value=9.5e-27 Score=249.25 Aligned_cols=171 Identities=33% Similarity=0.465 Sum_probs=144.7
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
.++|.+.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 3689999999999999999999854 8899999987653 3345788999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceec
Q 046199 803 YMANGSLEKCLYSS---NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 803 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~ 876 (902)
|+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988542 356899999999999999999999 9999999999999999 45678999999999876
Q ss_pred CCCccceeccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.... ......||+.|+|||++.
T Consensus 178 ~~~~-~~~~~~~t~~y~aPE~~~ 199 (285)
T 3is5_A 178 KSDE-HSTNAAGTALYMAPEVFK 199 (285)
T ss_dssp ----------CTTGGGCCHHHHT
T ss_pred CCcc-cCcCcccccCcCChHHhc
Confidence 5433 233467999999999864
No 183
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=3.9e-27 Score=271.94 Aligned_cols=175 Identities=23% Similarity=0.446 Sum_probs=152.3
Q ss_pred HHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
+.+..++|++.+.||+|+||.||+|++.. +..||||+++... ...+.+.+|++++++++||||+++++++...+..|+
T Consensus 215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 34566789999999999999999999875 8899999987543 345789999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 99999999999999764 345899999999999999999999 99999999999999999999999999999987654
Q ss_pred Cccc-eeccccccccccccccc
Q 046199 879 EESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~-~~~~~gt~~y~APE~l~ 899 (902)
.... .....+++.|+|||++.
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~ 392 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLA 392 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHH
T ss_pred CceeecCCCcCCcceeCHhHHh
Confidence 3322 12245678999999874
No 184
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.2e-26 Score=260.08 Aligned_cols=171 Identities=25% Similarity=0.405 Sum_probs=136.5
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCC-CCCccceeeeeecCC--ee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR-HRNLVKIISSCSNGN--FK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~ 797 (902)
..++|++.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999885 48999999986442 344567889999999997 999999999997543 78
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||++ ++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 589998865 35889999999999999999999 9999999999999999999999999999998764
Q ss_pred CC---------------------ccceecccccccccccccccc
Q 046199 878 GE---------------------ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~---------------------~~~~~~~~gt~~y~APE~l~~ 900 (902)
.. ....+..+||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 204 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence 31 111233579999999998854
No 185
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=3.4e-27 Score=253.20 Aligned_cols=177 Identities=23% Similarity=0.452 Sum_probs=154.4
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
+++.+..++|++.+.||+|+||.||+|++.. ++.||+|+++.. ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 3455678899999999999999999999865 889999998754 33457889999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 798 ALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
|+||||+++++|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 9999999999999999764 345899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccc-eeccccccccccccccc
Q 046199 877 NGEESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~-~~~~~gt~~y~APE~l~ 899 (902)
...... .....+|+.|+|||++.
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~ 185 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLA 185 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHH
T ss_pred cCCccccccCCccccCcCChhhhc
Confidence 544322 22345788999999874
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=2.7e-26 Score=248.18 Aligned_cols=172 Identities=31% Similarity=0.433 Sum_probs=152.6
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..+.|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 3467999999999999999999875 48999999997553 345678999999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 100 e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 100 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp ECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 99999999999854 46899999999999999999999 99999999999999999999999999999988765544
Q ss_pred ceecccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~ 193 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQ 193 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTT
T ss_pred ccCccCCCcCccCHHHHhc
Confidence 4445679999999998753
No 187
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.94 E-value=6.6e-27 Score=253.13 Aligned_cols=172 Identities=28% Similarity=0.498 Sum_probs=145.2
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
.+..++|++.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 466789999999999999999999864 468999887543 3345788999999999999999999998754 55799
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||+|+.....
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999999999877778999999999999999999999 999999999999999999999999999999765421
Q ss_pred --ccceeccccccccccccccc
Q 046199 880 --ESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 --~~~~~~~~gt~~y~APE~l~ 899 (902)
........||+.|+|||++.
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~ 207 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIR 207 (307)
T ss_dssp --------CCCCTTSCCHHHHH
T ss_pred cccccccCCCCCcceECcceee
Confidence 12223357999999999874
No 188
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=6.5e-27 Score=249.73 Aligned_cols=175 Identities=26% Similarity=0.441 Sum_probs=150.3
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
++.+..++|++.+.||+|+||.||+|++.+++.||+|+++... ...+.+.+|+++++.++||||+++++++.. +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 4556778999999999999999999999888899999987543 235788999999999999999999999864 45899
Q ss_pred EEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||.+.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999986432 25899999999999999999999 99999999999999999999999999999988754
Q ss_pred Cccc-eeccccccccccccccc
Q 046199 879 EESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~-~~~~~gt~~y~APE~l~ 899 (902)
.... .....+++.|+|||++.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~ 183 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAIN 183 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHH
T ss_pred cccccccCCCCccCccChhhhc
Confidence 3322 22245788999999874
No 189
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=1.2e-26 Score=247.07 Aligned_cols=170 Identities=22% Similarity=0.408 Sum_probs=130.0
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 468999999999999999999875 48999999987542 23356788999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||+ ++++.+++... ..+++..+..++.|++.|++||| ++||+||||||+||++++++.+||+|||.+.......
T Consensus 92 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 66888887554 45899999999999999999999 9999999999999999999999999999998765433
Q ss_pred cceecccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~~ 900 (902)
. .....||+.|+|||++..
T Consensus 167 ~-~~~~~~t~~y~aPE~~~~ 185 (275)
T 2eue_A 167 F-LKTSCGSPNYAAPEVISG 185 (275)
T ss_dssp ---------CTTCCHHHHCC
T ss_pred c-ccCCCCCcCcCCceeeeC
Confidence 2 234569999999998753
No 190
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.94 E-value=2.3e-26 Score=246.56 Aligned_cols=168 Identities=30% Similarity=0.498 Sum_probs=146.4
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccch-------hhhhHHHHHHHHHhCCCCCccceeeeeecC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG-------ALKSFDAECEVLKSVRHRNLVKIISSCSNG 794 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 794 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+++++.++||||+++++++.+.
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 44578999999999999999999985 5899999998654321 126789999999999999999999999766
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCc-----EEE
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLDDDMV-----AHL 867 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~~-----~kL 867 (902)
. ++||||+++++|.+++......+++..+..++.|++.|++||| +++ |+||||||+||+++.++. +||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 5 6999999999999998777778999999999999999999999 899 999999999999988776 999
Q ss_pred EeecCceecCCCccceecccccccccccccc
Q 046199 868 SDFGIAKLLNGEESMRTQTLGTIGYMAPGLW 898 (902)
Q Consensus 868 ~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l 898 (902)
+|||+|+.... ......||+.|+|||++
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~ 198 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETI 198 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGS
T ss_pred CCCCccccccc---cccccCCCccccCchhh
Confidence 99999986433 23446799999999987
No 191
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.94 E-value=7.2e-27 Score=253.88 Aligned_cols=176 Identities=25% Similarity=0.419 Sum_probs=151.9
Q ss_pred HHhhcccccccCeecccceeeEEEEEe------CCCcEEEEEEeeeccc-hhhhhHHHHHHHHHhC-CCCCccceeeeee
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSCS 792 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 792 (902)
+....++|++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 345678999999999999999999985 2367899999975543 3457889999999999 8999999999999
Q ss_pred cCCeeEEEEEccCCCChHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCC
Q 046199 793 NGNFKALVLEYMANGSLEKCLYSSNR-----------------SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPS 855 (902)
Q Consensus 793 ~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~ 855 (902)
.++..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++||+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence 99999999999999999999976543 4899999999999999999999 999999999999
Q ss_pred CEEEcCCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 856 NILLDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 856 NIll~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
||+++.++.+||+|||+++........ .....+|+.|+|||++.
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 220 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence 999999999999999999876554332 22345788999999864
No 192
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94 E-value=1.5e-26 Score=253.88 Aligned_cols=176 Identities=23% Similarity=0.461 Sum_probs=150.3
Q ss_pred HHhhcccccccCeecccceeeEEEEEeC--------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCccceeee
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISS 790 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 790 (902)
+....++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++++ +||||++++++
T Consensus 30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 109 (334)
T 2pvf_A 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 109 (334)
T ss_dssp TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence 3456789999999999999999999874 36789999997553 33457789999999999 89999999999
Q ss_pred eecCCeeEEEEEccCCCChHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCC
Q 046199 791 CSNGNFKALVLEYMANGSLEKCLYSSN---------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPS 855 (902)
Q Consensus 791 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~ 855 (902)
+..++..|+||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+
T Consensus 110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 186 (334)
T ss_dssp ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccc
Confidence 999999999999999999999997643 23889999999999999999999 999999999999
Q ss_pred CEEEcCCCcEEEEeecCceecCCCccce--eccccccccccccccc
Q 046199 856 NILLDDDMVAHLSDFGIAKLLNGEESMR--TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 856 NIll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~gt~~y~APE~l~ 899 (902)
||+++.++.+||+|||+++......... ....+|+.|+|||++.
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 232 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc
Confidence 9999999999999999998776543322 2245788999999874
No 193
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=262.93 Aligned_cols=174 Identities=26% Similarity=0.411 Sum_probs=146.9
Q ss_pred hhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
+..++|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++...+
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 34578999999999999999999853 36789999986543 344567889999999999999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEE
Q 046199 796 FKALVLEYMANGSLEKCLYSSN------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM---VAH 866 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~k 866 (902)
..|+||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997643 35889999999999999999999 99999999999999999555 599
Q ss_pred EEeecCceecCCCc--cceeccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEE--SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 867 L~DFG~a~~~~~~~--~~~~~~~gt~~y~APE~l~ 899 (902)
|+|||+|+...... .......||+.|+|||++.
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 259 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 259 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhc
Confidence 99999997543211 1223356899999999874
No 194
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.94 E-value=4.6e-27 Score=257.24 Aligned_cols=174 Identities=26% Similarity=0.415 Sum_probs=139.4
Q ss_pred HhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
....++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+++..|
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 456679999999999999999999875 488999999975432 23456789999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE-----cCCCcEEEEeecCc
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL-----DDDMVAHLSDFGIA 873 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll-----~~~~~~kL~DFG~a 873 (902)
+||||+++ +|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||++ +.++.+||+|||+|
T Consensus 110 lv~e~~~~-~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999975 999998654 45899999999999999999999 9999999999999999 44556999999999
Q ss_pred eecCCCccceecccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+.............||+.|+|||++..
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~ 211 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLG 211 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcC
Confidence 877654444455678999999998754
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=4.6e-27 Score=259.85 Aligned_cols=172 Identities=28% Similarity=0.390 Sum_probs=149.5
Q ss_pred hcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeecc----chhhhhHHHHHHHHHhC-CCCCccceeeeeecC
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF----DGALKSFDAECEVLKSV-RHRNLVKIISSCSNG 794 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 794 (902)
..++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++.+ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 4578999999999999999999883 58999999986432 23446677899999999 699999999999999
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
+..|+||||+++++|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999998654 45899999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCcc-ceeccccccccccccccc
Q 046199 875 LLNGEES-MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 875 ~~~~~~~-~~~~~~gt~~y~APE~l~ 899 (902)
....... ......||+.|+|||++.
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~ 233 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVR 233 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred ecccCCCCcccCcccCcCccChhhhc
Confidence 7643322 223357999999999986
No 196
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.94 E-value=9.3e-27 Score=261.48 Aligned_cols=172 Identities=31% Similarity=0.451 Sum_probs=148.7
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCC--eeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--FKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 799 (902)
..++|++.+.||+|+||.||+|++.. ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..|+
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 35789999999999999999999865 8999999997543 234567889999999999999999999987654 7899
Q ss_pred EEEccCCCChHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEEEEeecCc
Q 046199 800 VLEYMANGSLEKCLYSSN--RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL----DDDMVAHLSDFGIA 873 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~~kL~DFG~a 873 (902)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||++ +.++.+||+|||+|
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999986543 23899999999999999999999 9999999999999999 77788999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+....... .....||+.|+|||++.
T Consensus 164 ~~~~~~~~-~~~~~gt~~y~aPE~~~ 188 (396)
T 4eut_A 164 RELEDDEQ-FVSLYGTEEYLHPDMYE 188 (396)
T ss_dssp EECCCGGG-SSCSSSCCTTCCHHHHH
T ss_pred eEccCCCc-cccccCCccccCHHHhh
Confidence 88754432 33467999999999874
No 197
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.94 E-value=4.4e-27 Score=256.86 Aligned_cols=178 Identities=22% Similarity=0.449 Sum_probs=135.3
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeCCC----cEEEEEEeeec--cchhhhhHHHHHHHHHhCCCCCccceeeeee
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQ--FDGALKSFDAECEVLKSVRHRNLVKIISSCS 792 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 792 (902)
+++.+..++|++.+.||+|+||.||+|++... ..||+|+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence 34456678999999999999999999987653 37999998754 3445678999999999999999999999998
Q ss_pred cCCee------EEEEEccCCCChHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC
Q 046199 793 NGNFK------ALVLEYMANGSLEKCLYSSN-----RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD 861 (902)
Q Consensus 793 ~~~~~------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (902)
..+.. ++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++++
T Consensus 96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~ 172 (323)
T 3qup_A 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAE 172 (323)
T ss_dssp CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECT
T ss_pred ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcC
Confidence 77655 99999999999999985422 25899999999999999999999 999999999999999999
Q ss_pred CCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 862 DMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 862 ~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
++.+||+|||+|+........ .....+++.|+|||++.
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 212 (323)
T 3qup_A 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA 212 (323)
T ss_dssp TSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred CCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence 999999999999876543322 12245788999999874
No 198
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94 E-value=1.3e-26 Score=254.03 Aligned_cols=172 Identities=32% Similarity=0.452 Sum_probs=144.3
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 35789999999999999999999865 89999999865432 2346678999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||++++++.++.. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++......
T Consensus 103 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999988888764 3456899999999999999999999 9999999999999999999999999999998766554
Q ss_pred cceeccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~ 899 (902)
.......||+.|+|||++.
T Consensus 179 ~~~~~~~~t~~y~aPE~~~ 197 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLV 197 (331)
T ss_dssp -----CCCCCTTCCHHHHT
T ss_pred cccCCCcCCccccCccccc
Confidence 4445567999999999875
No 199
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94 E-value=2.4e-27 Score=271.08 Aligned_cols=175 Identities=23% Similarity=0.412 Sum_probs=150.6
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
.+.+..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..|+
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 3456778999999999999999999999888999999997543 34578999999999999999999999986 567899
Q ss_pred EEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999999996532 35788999999999999999999 99999999999999999999999999999987643
Q ss_pred Cccc-eeccccccccccccccc
Q 046199 879 EESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~-~~~~~gt~~y~APE~l~ 899 (902)
.... .....+|+.|+|||++.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~ 358 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAIN 358 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHH
T ss_pred CceeccCCCcccccccCHHHhc
Confidence 2211 12245678999999874
No 200
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.94 E-value=2.2e-26 Score=248.56 Aligned_cols=171 Identities=28% Similarity=0.441 Sum_probs=142.8
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHh--CCCCCccceeeeeec----CCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSN----GNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~ 797 (902)
..++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. .+..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 467899999999999999999988 6899999998644 33556667777766 789999999998643 3568
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNILLDDDMVAHLSDFGI 872 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 872 (902)
|+||||+++|+|.++++. ..+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+
T Consensus 82 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999999943 4689999999999999999999932 167999999999999999999999999999
Q ss_pred ceecCCCccce----ecccccccccccccccc
Q 046199 873 AKLLNGEESMR----TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 873 a~~~~~~~~~~----~~~~gt~~y~APE~l~~ 900 (902)
|+......... ....||+.|+|||++..
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 191 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTT
T ss_pred eeecccccccccccccccccccceeChhhhcC
Confidence 98765443322 22479999999998754
No 201
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.94 E-value=1.9e-26 Score=250.86 Aligned_cols=171 Identities=26% Similarity=0.356 Sum_probs=143.8
Q ss_pred ccccccc-CeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEEE
Q 046199 725 TDHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 725 ~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.++|++. +.||+|+||.||+|++. +++.||||+++.......+.+.+|+++++++ +||||+++++++.+++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678885 78999999999999975 5899999999876555667899999999985 7999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV---AHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---~kL~DFG~a~~~~~ 878 (902)
||+++++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998664 45899999999999999999999 999999999999999988775 99999999976542
Q ss_pred Ccc-------ceeccccccccccccccc
Q 046199 879 EES-------MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~-------~~~~~~gt~~y~APE~l~ 899 (902)
... ......||+.|+|||++.
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 194 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVE 194 (316)
T ss_dssp ---------------CCSGGGCCHHHHH
T ss_pred CCccccccccccccccCCcCccChHHhh
Confidence 211 112346999999999875
No 202
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.94 E-value=2.8e-26 Score=245.51 Aligned_cols=172 Identities=25% Similarity=0.438 Sum_probs=150.0
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
..++|++.+.||+|+||.||+|.+.. ++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 35789999999999999999999864 8999999997543 33457788999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecCceecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV---AHLSDFGIAKLLN 877 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---~kL~DFG~a~~~~ 877 (902)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+....
T Consensus 84 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999998888654 45899999999999999999999 999999999999999986655 9999999998765
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 160 ~~~~-~~~~~~~~~y~aPE~~~~ 181 (284)
T 3kk8_A 160 DSEA-WHGFAGTPGYLSPEVLKK 181 (284)
T ss_dssp SSCB-CCCSCSCGGGCCHHHHTT
T ss_pred cCcc-ccCCCCCcCCcCchhhcC
Confidence 4332 234679999999998753
No 203
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.94 E-value=1.8e-26 Score=255.11 Aligned_cols=172 Identities=27% Similarity=0.433 Sum_probs=147.0
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeec--------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSN-------- 793 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 793 (902)
.++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 478999999999999999999985 589999999865432 234578899999999999999999999876
Q ss_pred CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 794 GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 794 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
.+..|+||||+++ ++.+.+......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4568999999975 888888776677999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCc----cceecccccccccccccccc
Q 046199 874 KLLNGEE----SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~----~~~~~~~gt~~y~APE~l~~ 900 (902)
+.+.... .......||+.|+|||++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLG 202 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTT
T ss_pred ccccccccccccccCCcccccCccCchhhcC
Confidence 8765322 12233578999999998753
No 204
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.94 E-value=3.1e-26 Score=246.53 Aligned_cols=171 Identities=30% Similarity=0.452 Sum_probs=145.7
Q ss_pred ccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEcc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEYM 804 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (902)
++|.....||+|+||.||+|++. +++.||+|+++.......+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 44555669999999999999985 48899999998766666788999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-CCcEEEEeecCceecCCCcc
Q 046199 805 ANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD-DMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 805 ~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kL~DFG~a~~~~~~~~ 881 (902)
++++|.+++..... ..++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||.+........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999976533 4668889999999999999999 999999999999999987 89999999999988765443
Q ss_pred ceeccccccccccccccc
Q 046199 882 MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 882 ~~~~~~gt~~y~APE~l~ 899 (902)
......||+.|+|||++.
T Consensus 179 ~~~~~~~~~~y~aPE~~~ 196 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIID 196 (295)
T ss_dssp --CCCCCCGGGCCHHHHH
T ss_pred cccccCCCccccChhhhc
Confidence 344467999999999874
No 205
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94 E-value=1.2e-26 Score=264.87 Aligned_cols=172 Identities=33% Similarity=0.442 Sum_probs=147.4
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC-eeE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN-FKA 798 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 798 (902)
.+.+..++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..|
T Consensus 187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 187 GWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp TCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred ccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence 34566789999999999999999999884 7899999997543 4578999999999999999999999986654 789
Q ss_pred EEEEccCCCChHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 799 LVLEYMANGSLEKCLYSSNR-SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
+||||+++|+|.+++..... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999999976544 3689999999999999999999 9999999999999999999999999999998653
Q ss_pred CCccceecccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
... ....+++.|+|||++..
T Consensus 341 ~~~---~~~~~~~~y~aPE~~~~ 360 (450)
T 1k9a_A 341 STQ---DTGKLPVKWTAPEALRE 360 (450)
T ss_dssp ---------CCCTTTSCHHHHHS
T ss_pred ccc---cCCCCCcceeCHHHhcC
Confidence 321 22357889999998753
No 206
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94 E-value=1.6e-26 Score=246.78 Aligned_cols=172 Identities=28% Similarity=0.432 Sum_probs=146.6
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 345789999999999999999998865 7799999986542 223467889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 86 lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999998654 45899999999999999999999 99999999999999999999999999999865433
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
. ......||+.|+|||++..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~ 181 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEG 181 (279)
T ss_dssp --------CCCCTTCCHHHHTT
T ss_pred c--cccccCCCCCccCHhHhcc
Confidence 2 2234579999999998753
No 207
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.94 E-value=1.9e-26 Score=258.79 Aligned_cols=167 Identities=24% Similarity=0.333 Sum_probs=135.0
Q ss_pred ccccccc-CeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHH-hCCCCCccceeeeeec----CCee
Q 046199 725 TDHFSEK-SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLK-SVRHRNLVKIISSCSN----GNFK 797 (902)
Q Consensus 725 ~~~y~~~-~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~ 797 (902)
.++|.+. +.||+|+||.||+|++.. ++.||||+++.. ..+.+|++++. ..+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3567666 789999999999999864 889999998632 45678888874 4589999999998865 5678
Q ss_pred EEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a 873 (902)
|+||||++||+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999997643 35899999999999999999999 999999999999999987 789999999999
Q ss_pred eecCCCccceecccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+...... .....+||+.|+|||++..
T Consensus 212 ~~~~~~~-~~~~~~gt~~y~aPE~~~~ 237 (400)
T 1nxk_A 212 KETTSHN-SLTTPCYTPYYVAPEVLGP 237 (400)
T ss_dssp EECC------------CTTCCGGGSCC
T ss_pred cccCCCC-ccccCCCCCCccCHhhcCC
Confidence 8765433 2344679999999999753
No 208
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.94 E-value=1.1e-26 Score=265.53 Aligned_cols=169 Identities=25% Similarity=0.311 Sum_probs=139.2
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeec--cchhhhhHHHHHHHHHhCCCCCccceeeeeecC------
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQ--FDGALKSFDAECEVLKSVRHRNLVKIISSCSNG------ 794 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 794 (902)
..++|++.+.||+|+||.||+|++.. ++.||||++... .....+++.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 35789999999999999999998864 889999999754 234457888999999999999999999998654
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
...|+||||+++ ++.+.+. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 467999999976 5666663 24889999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCccceecccccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
...... .....+||+.|+|||++..
T Consensus 213 ~~~~~~-~~~~~~gt~~y~aPE~~~~ 237 (464)
T 3ttj_A 213 TAGTSF-MMTPYVVTRYYRAPEVILG 237 (464)
T ss_dssp ----CC-CC----CCCTTCCHHHHTT
T ss_pred ecCCCc-ccCCCcccccccCHHHHcC
Confidence 765432 2344679999999999864
No 209
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=2.9e-26 Score=245.85 Aligned_cols=169 Identities=25% Similarity=0.360 Sum_probs=147.1
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 800 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 468999999999999999999986 58999999997543 33457788999999999 899999999999999999999
Q ss_pred EEccCCCChHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---------------
Q 046199 801 LEYMANGSLEKCLYSS---NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD--------------- 862 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~--------------- 862 (902)
|||+++++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999998653 255899999999999999999999 9999999999999999844
Q ss_pred ----CcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 863 ----MVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 863 ----~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..+||+|||.+....... ...||+.|+|||++..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~ 204 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQE 204 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTT
T ss_pred cCCceEEEEcccccccccCCcc----ccCCCccccChhHhcC
Confidence 479999999998865432 2458999999998753
No 210
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=2.2e-26 Score=249.44 Aligned_cols=173 Identities=30% Similarity=0.459 Sum_probs=142.7
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc-----hhhhhHHHHHHHHHhCC---CCCccceeeeeec
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVR---HRNLVKIISSCSN 793 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 793 (902)
...++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34679999999999999999999975 489999999875431 22356778888877764 9999999999976
Q ss_pred CC-----eeEEEEEccCCCChHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEE
Q 046199 794 GN-----FKALVLEYMANGSLEKCLYSSNR-SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHL 867 (902)
Q Consensus 794 ~~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (902)
.. ..++||||++ ++|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 54 5899999997 599999876543 3899999999999999999999 999999999999999999999999
Q ss_pred EeecCceecCCCccceecccccccccccccccc
Q 046199 868 SDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 868 ~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+|||+|+...... ......||+.|+|||++..
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~ 193 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQ 193 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHT
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcC
Confidence 9999998764333 2344679999999998753
No 211
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.1e-26 Score=256.13 Aligned_cols=175 Identities=26% Similarity=0.335 Sum_probs=145.5
Q ss_pred HhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeec-----cchhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQ-----FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
....++|++.+.||+|+||.||+|++.. ++.||+|+++.. .....+.+.+|+++++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 4556899999999999999999998854 889999998754 2345578999999999999999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 046199 796 FKALVLEYMANGSLEKCLYSS---------------------------------------NRSLDIFQRLSIMIDVALAL 836 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~~L 836 (902)
..++||||+++|+|.+++... ...+++..+..++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999988420 11135677889999999999
Q ss_pred HHHHccCCCCeEEcCCCCCCEEEcCCC--cEEEEeecCceecCCCcc----ceeccccccccccccccc
Q 046199 837 EYLHFGYSNPVVHCDIKPSNILLDDDM--VAHLSDFGIAKLLNGEES----MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 837 ~~LH~~~~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~----~~~~~~gt~~y~APE~l~ 899 (902)
+||| +.+|+||||||+||+++.++ .+||+|||+|+.+..... ......||+.|+|||++.
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence 9999 99999999999999998776 899999999987643221 123467999999999875
No 212
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94 E-value=1.8e-26 Score=256.31 Aligned_cols=180 Identities=26% Similarity=0.301 Sum_probs=146.6
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccch-----------hhhhHHHHHHHHHhCCCCCc
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDG-----------ALKSFDAECEVLKSVRHRNL 784 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni 784 (902)
....++....++|++.+.||+|+||.||+|.+.+++.||||++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4466778888999999999999999999999988999999998653221 23778999999999999999
Q ss_pred cceeeeee-----cCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 046199 785 VKIISSCS-----NGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL 859 (902)
Q Consensus 785 v~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (902)
+++++++. .....|+||||++ |++.+++......+++..+..++.||+.||+||| +.||+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 99999984 3347899999997 5888888777667999999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 860 DDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 860 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+.++.+||+|||+++...... ......||+.|+|||++..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~ 207 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQ 207 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTT
T ss_pred cCCCCEEEEecCccccccccc-ccceecccceecCcHHhcC
Confidence 999999999999998654332 2334678999999998753
No 213
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.5e-26 Score=248.13 Aligned_cols=173 Identities=25% Similarity=0.447 Sum_probs=148.5
Q ss_pred hhcccccccC-eecccceeeEEEEEeC---CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
...++|.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|+++++.++||||+++++++. .+..
T Consensus 6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 84 (287)
T 1u59_A 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEAL 84 (287)
T ss_dssp CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSE
T ss_pred ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCc
Confidence 4456777777 9999999999999864 47789999997653 345678999999999999999999999994 5568
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
++||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999999999776677999999999999999999999 9999999999999999999999999999998875
Q ss_pred CCccce---eccccccccccccccc
Q 046199 878 GEESMR---TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~---~~~~gt~~y~APE~l~ 899 (902)
...... ....+|+.|+|||++.
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~ 186 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECIN 186 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred cCcceeeccccccccccccCHHHhc
Confidence 443322 1235688999999874
No 214
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.94 E-value=3.3e-26 Score=253.90 Aligned_cols=174 Identities=32% Similarity=0.470 Sum_probs=152.0
Q ss_pred HHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--------hhhhhHHHHHHHHHhC-CCCCccceeee
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--------GALKSFDAECEVLKSV-RHRNLVKIISS 790 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~~ 790 (902)
.....++|++.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+.+++.+ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445578999999999999999999986 599999999875431 1245678999999999 79999999999
Q ss_pred eecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEee
Q 046199 791 CSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDF 870 (902)
Q Consensus 791 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 870 (902)
+...+..|+||||+++++|.+++... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 99999999999999999999998654 45899999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCccceeccccccccccccccc
Q 046199 871 GIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 871 G~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
|++..+..... .....||+.|+|||++.
T Consensus 245 G~~~~~~~~~~-~~~~~gt~~y~aPE~~~ 272 (365)
T 2y7j_A 245 GFSCHLEPGEK-LRELCGTPGYLAPEILK 272 (365)
T ss_dssp TTCEECCTTCC-BCCCCSCGGGCCHHHHH
T ss_pred CcccccCCCcc-cccCCCCCCccChhhcc
Confidence 99988764432 33467999999999874
No 215
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=254.48 Aligned_cols=171 Identities=25% Similarity=0.389 Sum_probs=144.7
Q ss_pred hhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCC--CCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRH--RNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|.+.+++.||||+++... ....+.+.+|+++++.++| |||+++++++..++..|
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 3567899999999999999999999889999999997553 2345778999999999976 99999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+|||+ .+++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++ ++.+||+|||+|+....
T Consensus 86 lv~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEECC-CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEeC-CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99995 578999999764 46899999999999999999999 99999999999999997 57899999999987654
Q ss_pred Cccc--eeccccccccccccccc
Q 046199 879 EESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~--~~~~~gt~~y~APE~l~ 899 (902)
.... .....||+.|+|||++.
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~ 182 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIK 182 (343)
T ss_dssp ----------CCCCSSCCHHHHH
T ss_pred ccccccCCCCcCCcCcCCHHHHh
Confidence 3322 23467999999999985
No 216
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=3.6e-26 Score=251.13 Aligned_cols=173 Identities=28% Similarity=0.425 Sum_probs=143.3
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhC--CCCCccceeeeeecC--
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSCSNG-- 794 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~-- 794 (902)
.......++|++.+.||+|+||.||+|++. ++.||||++... ......+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 344455689999999999999999999985 899999998643 234455566666554 899999999999877
Q ss_pred --CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC--------CeEEcCCCCCCEEEcCCCc
Q 046199 795 --NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN--------PVVHCDIKPSNILLDDDMV 864 (902)
Q Consensus 795 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~--------~ivHrDlkp~NIll~~~~~ 864 (902)
+..|+||||+++|+|.++++.. .+++..+..++.|++.||+||| +. ||+||||||+||+++.++.
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCC
Confidence 7899999999999999999654 5899999999999999999999 77 9999999999999999999
Q ss_pred EEEEeecCceecCCCccce----ecccccccccccccccc
Q 046199 865 AHLSDFGIAKLLNGEESMR----TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 865 ~kL~DFG~a~~~~~~~~~~----~~~~gt~~y~APE~l~~ 900 (902)
+||+|||+|+......... ....||+.|+|||++..
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 220 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTT
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhccc
Confidence 9999999998765433221 23579999999998753
No 217
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.93 E-value=2.3e-26 Score=250.39 Aligned_cols=175 Identities=24% Similarity=0.305 Sum_probs=148.8
Q ss_pred HhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeee----cCCe
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS----NGNF 796 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~ 796 (902)
.+..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++. ....
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 355689999999999999999999984 58999999998766666788999999999999999999999986 3457
Q ss_pred eEEEEEccCCCChHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 797 KALVLEYMANGSLEKCLYS---SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
.|+||||+++++|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 8999999999999999865 3566899999999999999999999 999999999999999999999999999998
Q ss_pred eecCCCccc---------eeccccccccccccccc
Q 046199 874 KLLNGEESM---------RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~---------~~~~~gt~~y~APE~l~ 899 (902)
......... .....||+.|+|||++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 216 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSS
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhc
Confidence 765321110 11235799999999875
No 218
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.93 E-value=1.5e-26 Score=261.45 Aligned_cols=170 Identities=28% Similarity=0.411 Sum_probs=137.9
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--------chhhhhHHHHHHHHHhCCCCCccceeeeeecC
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--------DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 794 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 794 (902)
..++|.+.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 45789999999999999999998865 8999999987542 1223468899999999999999999999864
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEEEEeec
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM---VAHLSDFG 871 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kL~DFG 871 (902)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 457999999999999998854 356899999999999999999999 99999999999999996544 59999999
Q ss_pred CceecCCCccceeccccccccccccccc
Q 046199 872 IAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 872 ~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+|+...... .....+||+.|+|||++.
T Consensus 288 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~ 314 (419)
T 3i6u_A 288 HSKILGETS-LMRTLCGTPTYLAPEVLV 314 (419)
T ss_dssp TTTSCC------------CTTCCTTTTC
T ss_pred cceecCCCc-cccccCCCCCccCceeee
Confidence 998765432 233467999999999975
No 219
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.93 E-value=2.5e-26 Score=265.68 Aligned_cols=170 Identities=26% Similarity=0.421 Sum_probs=144.7
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999986 48899999997543 334577899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a~~~~~ 878 (902)
||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++. ++.+||+|||+|+....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988654 45899999999999999999999 999999999999999976 44599999999988764
Q ss_pred Cccceeccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~ 899 (902)
... ....+||+.|+|||++.
T Consensus 192 ~~~-~~~~~gt~~y~aPE~l~ 211 (494)
T 3lij_A 192 QKK-MKERLGTAYYIAPEVLR 211 (494)
T ss_dssp TBC-BCCCCSCTTTCCHHHHT
T ss_pred Ccc-ccccCCCcCeeCHHHHc
Confidence 432 34467999999999864
No 220
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.93 E-value=1.2e-26 Score=257.57 Aligned_cols=174 Identities=20% Similarity=0.251 Sum_probs=142.5
Q ss_pred hhcccccccCeecccceeeEEEEEeCC------CcEEEEEEeeeccchh-----------hhhHHHHHHHHHhCCCCCcc
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFDGA-----------LKSFDAECEVLKSVRHRNLV 785 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv 785 (902)
...++|++.+.||+|+||.||+|++.. ++.||||++....... ......|+..++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 345699999999999999999998864 4789999987543211 12234456667788899999
Q ss_pred ceeeeeecC----CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-
Q 046199 786 KIISSCSNG----NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD- 860 (902)
Q Consensus 786 ~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~- 860 (902)
++++++... ...|+||||+ +++|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEES
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEec
Confidence 999998764 5689999999 99999999887678999999999999999999999 99999999999999998
Q ss_pred -CCCcEEEEeecCceecCCCccc-------eecccccccccccccccc
Q 046199 861 -DDMVAHLSDFGIAKLLNGEESM-------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 861 -~~~~~kL~DFG~a~~~~~~~~~-------~~~~~gt~~y~APE~l~~ 900 (902)
.++.+||+|||+|+.+...... .....||+.|||||++..
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 235 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG 235 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC
Confidence 8899999999999876533221 122459999999998754
No 221
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.93 E-value=3.8e-26 Score=243.34 Aligned_cols=173 Identities=25% Similarity=0.386 Sum_probs=150.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3478999999999999999999986 58999999997543 344578899999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCcc
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEES 881 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 881 (902)
||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+........
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999998854 345899999999999999999999 99999999999999999999999999999986543221
Q ss_pred --ceecccccccccccccccc
Q 046199 882 --MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 882 --~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~ 181 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKR 181 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTC
T ss_pred hhcccCCccccCccChHHHhc
Confidence 2233578999999998753
No 222
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.93 E-value=5.6e-27 Score=255.88 Aligned_cols=181 Identities=24% Similarity=0.394 Sum_probs=153.1
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCcccee
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKII 788 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~ 788 (902)
+..+++....++|++.+.||+|+||.||+|++. .++.||+|++..... .....+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344456677889999999999999999999764 267899999875432 3456788999999999999999999
Q ss_pred eeeecCCeeEEEEEccCCCChHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 046199 789 SSCSNGNFKALVLEYMANGSLEKCLYSSN---------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL 859 (902)
Q Consensus 789 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (902)
+++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence 99999999999999999999999986522 34689999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceecCCCccce--eccccccccccccccc
Q 046199 860 DDDMVAHLSDFGIAKLLNGEESMR--TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 860 ~~~~~~kL~DFG~a~~~~~~~~~~--~~~~gt~~y~APE~l~ 899 (902)
+.++.+||+|||+++......... ....+|+.|+|||++.
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 213 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 213 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhc
Confidence 999999999999998664333221 2245788999999874
No 223
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.93 E-value=1.2e-26 Score=253.77 Aligned_cols=173 Identities=27% Similarity=0.412 Sum_probs=142.7
Q ss_pred hcccccccCeecccceeeEEEEEeCC-Cc----EEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GM----EVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
..++|++.+.||+|+||.||+|++.. ++ +||+|.++... ....+.+.+|+.++++++||||+++++++..++ .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 45789999999999999999998753 43 46888775432 344578999999999999999999999998765 6
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
++|+||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+...
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 8899999999999999887778999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCccce--ecccccccccccccccc
Q 046199 878 GEESMR--TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 878 ~~~~~~--~~~~gt~~y~APE~l~~ 900 (902)
...... ....+|+.|+|||++..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~ 193 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILH 193 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHH
T ss_pred CCcccccccCCCccccccChHHhcc
Confidence 443322 22457889999998753
No 224
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.93 E-value=3.5e-26 Score=248.14 Aligned_cols=174 Identities=28% Similarity=0.424 Sum_probs=139.1
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 4568999999999999999999975 58999999997532 3445778999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 800 VLEYMANGSLEKCLYS---SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
||||+++++|.+++.. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 3456899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccceecccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
...........|++.|+|||++..
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~ 210 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHE 210 (310)
T ss_dssp ------------CCSSCCHHHHTT
T ss_pred cCCCccccccCCCeeEeChHHhCC
Confidence 554443444678999999998753
No 225
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.93 E-value=4.8e-26 Score=243.51 Aligned_cols=170 Identities=28% Similarity=0.412 Sum_probs=146.4
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc------hhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD------GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999986 489999999875432 1357789999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM----VAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kL~DFG~a 873 (902)
++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999998653 45899999999999999999999 99999999999999998877 8999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
........ .....||+.|+|||++.
T Consensus 160 ~~~~~~~~-~~~~~~~~~y~aPE~~~ 184 (283)
T 3bhy_A 160 HKIEAGNE-FKNIFGTPEFVAPEIVN 184 (283)
T ss_dssp EECC---------CCCGGGCCHHHHT
T ss_pred eeccCCCc-ccccCCCcCccCcceec
Confidence 87654332 23356999999999874
No 226
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.93 E-value=4.6e-26 Score=264.25 Aligned_cols=171 Identities=27% Similarity=0.419 Sum_probs=147.2
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc-------------hhhhhHHHHHHHHHhCCCCCccceee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD-------------GALKSFDAECEVLKSVRHRNLVKIIS 789 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 789 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++.... ...+.+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45789999999999999999999865 88999999875421 23467889999999999999999999
Q ss_pred eeecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEE
Q 046199 790 SCSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM---VAH 866 (902)
Q Consensus 790 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~k 866 (902)
++.+.+..|+||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999988654 45899999999999999999999 99999999999999998776 699
Q ss_pred EEeecCceecCCCccceeccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
|+|||+|+....... .....||+.|+|||++.
T Consensus 190 l~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~ 221 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK-LRDRLGTAYYIAPEVLK 221 (504)
T ss_dssp ECCCTTCEECCTTSC-BCCCCSCTTTCCHHHHT
T ss_pred EEECCCCEEcCCCCc-cccccCCcCCCCHHHhc
Confidence 999999988754432 34467999999999864
No 227
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.93 E-value=1.5e-26 Score=251.62 Aligned_cols=182 Identities=22% Similarity=0.384 Sum_probs=154.3
Q ss_pred ccCHHHHHhhcccccccCeecccceeeEEEEEe------CCCcEEEEEEeeeccc-hhhhhHHHHHHHHHhC-CCCCccc
Q 046199 715 RFSYRELLLATDHFSEKSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVK 786 (902)
Q Consensus 715 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 786 (902)
.+...++....++|++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+.+++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 456677788899999999999999999999985 2368899999976533 3456789999999999 7999999
Q ss_pred eeeeeecC-CeeEEEEEccCCCChHHHHhhCCCC---------------CCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 046199 787 IISSCSNG-NFKALVLEYMANGSLEKCLYSSNRS---------------LDIFQRLSIMIDVALALEYLHFGYSNPVVHC 850 (902)
Q Consensus 787 l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHr 850 (902)
+++++... +..++||||+++++|.+++...... +++..+..++.|++.||+||| ++||+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 99998765 4589999999999999999765432 789999999999999999999 9999999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 851 DIKPSNILLDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 851 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
||||+||+++.++.+||+|||+++........ .....||+.|+|||++.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 223 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 223 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhc
Confidence 99999999999999999999999876543322 22356889999999874
No 228
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.93 E-value=3e-26 Score=256.42 Aligned_cols=171 Identities=25% Similarity=0.379 Sum_probs=145.2
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCC--CCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR--HRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|.+.+++.||||++.... ....+.+.+|+++++.++ ||||+++++++..++..|+
T Consensus 54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 345799999999999999999998889999999997553 334578899999999996 5999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||| +.+++|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++ ++.+||+|||+|+.+...
T Consensus 134 v~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred EEe-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 999 5678999999765 46889999999999999999999 99999999999999996 579999999999876543
Q ss_pred cc--ceecccccccccccccccc
Q 046199 880 ES--MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~--~~~~~~gt~~y~APE~l~~ 900 (902)
.. .....+||+.|+|||++..
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHC
T ss_pred CccccCCCCCcCCCccChHHhhh
Confidence 32 1234679999999999853
No 229
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.93 E-value=2.6e-26 Score=265.16 Aligned_cols=171 Identities=26% Similarity=0.407 Sum_probs=148.0
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3478999999999999999999986 58999999986432 33457889999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc---CCCcEEEEeecCceecC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD---DDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a~~~~ 877 (902)
|||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||+|+...
T Consensus 100 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999988654 45899999999999999999999 99999999999999995 45689999999998765
Q ss_pred CCccceeccccccccccccccc
Q 046199 878 GEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~~~~~~gt~~y~APE~l~ 899 (902)
... ......||+.|+|||++.
T Consensus 176 ~~~-~~~~~~gt~~y~aPE~~~ 196 (486)
T 3mwu_A 176 QNT-KMKDRIGTAYYIAPEVLR 196 (486)
T ss_dssp CC-----CCTTGGGGCCGGGGG
T ss_pred CCC-ccCCCcCCCCCCCHHHhC
Confidence 433 233467999999999875
No 230
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.93 E-value=2.2e-26 Score=248.67 Aligned_cols=171 Identities=28% Similarity=0.420 Sum_probs=143.5
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeec----------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN---------- 793 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 793 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++.. ....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 468999999999999999999985 5899999999654 3345788999999999999999999998754
Q ss_pred ---CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEee
Q 046199 794 ---GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDF 870 (902)
Q Consensus 794 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 870 (902)
.+..|+||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45789999999999999999876667888999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCc--------------cceeccccccccccccccc
Q 046199 871 GIAKLLNGEE--------------SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 871 G~a~~~~~~~--------------~~~~~~~gt~~y~APE~l~ 899 (902)
|.++...... .......||+.|+|||++.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 203 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHT
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence 9998654321 1123356899999999875
No 231
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=253.71 Aligned_cols=180 Identities=28% Similarity=0.417 Sum_probs=147.5
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeec
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSN 793 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 793 (902)
+++.++....++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344445567789999999999999999999985 58999999987543 3457889999999999 79999999999976
Q ss_pred ------CCeeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEE
Q 046199 794 ------GNFKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAH 866 (902)
Q Consensus 794 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (902)
.+..|+||||+++++|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 568899999999999999997643 46899999999999999999999 99999999999999999999999
Q ss_pred EEeecCceecCCCccceeccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
|+|||++..............||+.|+|||++.
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 202 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202 (326)
T ss_dssp ECCCTTTC-------------CCGGGCCHHHHC
T ss_pred EeeCcCceecCcCccccccccCCccccChhhhc
Confidence 999999987654433334467999999999875
No 232
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.7e-26 Score=249.74 Aligned_cols=174 Identities=28% Similarity=0.473 Sum_probs=151.0
Q ss_pred hhcccccccCeecccceeeEEEEEe-----CCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC--
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN-- 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 795 (902)
...++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|+++++.++||||+++++++...+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 4567899999999999999999984 358899999998766666788999999999999999999999986654
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 789999999999999999887677999999999999999999999 99999999999999999999999999999988
Q ss_pred cCCCccce---eccccccccccccccc
Q 046199 876 LNGEESMR---TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~~---~~~~gt~~y~APE~l~ 899 (902)
........ ....++..|+|||++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 221 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLT 221 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhc
Confidence 75443221 2245778899999874
No 233
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=2.3e-26 Score=255.23 Aligned_cols=167 Identities=25% Similarity=0.368 Sum_probs=139.8
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCC------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------ 795 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 795 (902)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 578999999999999999999985 48999999986543 234567889999999999999999999997653
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||+ +++|.+++.. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 7899999865 45899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 178 ~~~~---~~~~~~t~~y~aPE~~~~ 199 (367)
T 1cm8_A 178 ADSE---MTGYVVTRWYRAPEVILN 199 (367)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHT
T ss_pred cccc---cCcCcCCCCcCCHHHHhC
Confidence 6432 234678999999998754
No 234
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.93 E-value=6.7e-27 Score=267.08 Aligned_cols=175 Identities=27% Similarity=0.447 Sum_probs=145.6
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
.+.+..++|++.+.||+|+||.||+|++.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..|+
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 34566789999999999999999999998888899999975432 34789999999999999999999999876 67899
Q ss_pred EEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++....
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999999653 345899999999999999999999 99999999999999999999999999999987654
Q ss_pred Ccc-ceeccccccccccccccc
Q 046199 879 EES-MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~-~~~~~~gt~~y~APE~l~ 899 (902)
... ......+++.|+|||++.
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~ 354 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAAL 354 (452)
T ss_dssp ----------CCGGGSCHHHHH
T ss_pred CceecccCCcccccccCHhHHh
Confidence 322 122345788999999874
No 235
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.93 E-value=1.3e-26 Score=254.26 Aligned_cols=177 Identities=22% Similarity=0.415 Sum_probs=151.2
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCC------CcEEEEEEeeeccc-hhhhhHHHHHHHHHhC-CCCCccceeeee
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSC 791 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 791 (902)
++....++|++.+.||+|+||.||+|++.. .+.||+|+++.... ...+.+.+|+++++.+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 456778899999999999999999998753 34799999975532 3457789999999999 899999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSS-------------NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNIL 858 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (902)
..++..|+||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence 9999999999999999999998653 235789999999999999999999 999999999999999
Q ss_pred EcCCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 859 LDDDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 859 l~~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
++.++.+||+|||+++........ .....+|+.|+|||++.
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 239 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 239 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc
Confidence 999999999999999866433322 22345788999999874
No 236
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.93 E-value=4.7e-26 Score=243.74 Aligned_cols=172 Identities=28% Similarity=0.426 Sum_probs=150.3
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 345789999999999999999999864 7889999986542 223467899999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++++|.+++... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999999998654 35899999999999999999999 99999999999999999999999999999977643
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.. .....|++.|+|||++..
T Consensus 167 ~~--~~~~~~~~~y~aPE~~~~ 186 (284)
T 2vgo_A 167 LR--RRTMCGTLDYLPPEMIEG 186 (284)
T ss_dssp SC--BCCCCSCGGGCCHHHHTT
T ss_pred cc--cccccCCCCcCCHHHhcc
Confidence 22 234579999999998753
No 237
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=8.3e-26 Score=240.70 Aligned_cols=210 Identities=20% Similarity=0.210 Sum_probs=168.6
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNK 473 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~ 473 (902)
++++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~------------------- 89 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ------------------- 89 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-------------------
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC-------------------
Confidence 6788888888888777777888888888888888887666667776666666666655554
Q ss_pred ccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCC-CccccccccccceeccCCccccccCcc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGS-LPLDIGNMKVVVEINLSRNYLTGDIPT 552 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 552 (902)
+..+..|.++++|++|++++|++++..+..+..+++|++|++++|++++. +|..+..+++|++|++++|++++..+.
T Consensus 90 --~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 90 --SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp --EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred --ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 45556777888888888888888887777788888888888888888764 578888888888889998888887778
Q ss_pred ccccCCccc----eEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCC
Q 046199 553 TIGGLTNLQ----LLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSG 625 (902)
Q Consensus 553 ~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 625 (902)
.|..+.+|+ .|++++|++++..+..+.. .+|+.|+|++|++++..+..+..+++|+.|++++|+++|.+|.-
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred HhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 888877777 8999999999665655554 48999999999999777777899999999999999999988864
No 238
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.93 E-value=1e-26 Score=254.01 Aligned_cols=172 Identities=24% Similarity=0.402 Sum_probs=143.3
Q ss_pred hcccccccCeecccceeeEEEEEeCC-Cc----EEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GM----EVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
..++|++.+.||+|+||.||+|++.. ++ +||+|.+.... ....+.+.+|+.+++.++||||+++++++.. +..
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~ 89 (325)
T 3kex_A 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSL 89 (325)
T ss_dssp CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSE
T ss_pred CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Ccc
Confidence 45789999999999999999998754 44 37888775432 2344677889999999999999999999864 568
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+...
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 8999999999999999776667899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCcc--ceeccccccccccccccc
Q 046199 878 GEES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~--~~~~~~gt~~y~APE~l~ 899 (902)
.... ......||+.|+|||++.
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~ 190 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIH 190 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHH
T ss_pred cccccccccCCCCcccccChHHhc
Confidence 4332 223356788999999875
No 239
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.93 E-value=2.8e-26 Score=253.29 Aligned_cols=171 Identities=22% Similarity=0.336 Sum_probs=150.7
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchh-----------------hhhHHHHHHHHHhCCCCCccc
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGA-----------------LKSFDAECEVLKSVRHRNLVK 786 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 786 (902)
..++|++.+.||+|+||.||+|++ +++.||+|++....... .+.+.+|+++++.++||||++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 457899999999999999999999 89999999997542111 178999999999999999999
Q ss_pred eeeeeecCCeeEEEEEccCCCChHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCCEE
Q 046199 787 IISSCSNGNFKALVLEYMANGSLEKC------LYSS-NRSLDIFQRLSIMIDVALALEYLHFGYS-NPVVHCDIKPSNIL 858 (902)
Q Consensus 787 l~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~-~~ivHrDlkp~NIl 858 (902)
+++++.+.+..|+||||+++++|.++ +... ...+++..+..++.|++.||+||| + +||+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 99999999999999999999999998 5432 466899999999999999999999 8 99999999999999
Q ss_pred EcCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 859 LDDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 859 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
++.++.+||+|||.+...... ......||+.|+|||++..
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~ 224 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSN 224 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcC
Confidence 999999999999999876543 3344679999999999754
No 240
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.93 E-value=3.4e-26 Score=247.49 Aligned_cols=171 Identities=25% Similarity=0.399 Sum_probs=146.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++.......+.+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3468999999999999999999986 589999999986654455778999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceecCCC
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~~ 879 (902)
|+++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||.++.....
T Consensus 87 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999988654 45899999999999999999999 9999999999999999 78889999999999764332
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 163 --~~~~~~~~~~y~aPE~~~~ 181 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQ 181 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSS
T ss_pred --ccccccCCCCccChHHhcc
Confidence 2233568999999998753
No 241
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.93 E-value=7.5e-26 Score=243.96 Aligned_cols=172 Identities=28% Similarity=0.388 Sum_probs=150.1
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc---------chhhhhHHHHHHHHHhCC-CCCccceeeee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---------DGALKSFDAECEVLKSVR-HRNLVKIISSC 791 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 791 (902)
...++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 345789999999999999999999864 8899999997543 123467789999999995 99999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
..++..++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999998654 45899999999999999999999 9999999999999999999999999999
Q ss_pred CceecCCCccceeccccccccccccccc
Q 046199 872 IAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 872 ~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.+........ .....||+.|+|||++.
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 170 FSCQLDPGEK-LREVCGTPSYLAPEIIE 196 (298)
T ss_dssp TCEECCTTCC-BCCCCSCGGGCCHHHHH
T ss_pred chhhcCCCcc-cccccCCccccCHHHhc
Confidence 9987654332 33467999999999874
No 242
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.93 E-value=3.5e-26 Score=246.61 Aligned_cols=173 Identities=25% Similarity=0.432 Sum_probs=145.9
Q ss_pred hcccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeee-ecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSC-SNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~ 797 (902)
...+|++.+.||+|+||.||+|++.+ ...||+|.++... ....+.+.+|+.++++++||||+++++++ ..++..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 34578999999999999999998753 3358999887543 34557889999999999999999999985 556788
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
++||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.|+...
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccc
Confidence 9999999999999999877777899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCcc----ceeccccccccccccccc
Q 046199 878 GEES----MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~----~~~~~~gt~~y~APE~l~ 899 (902)
.... ......+|+.|+|||++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~ 205 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQ 205 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHH
T ss_pred ccchhccccccCCCCCccccChHHhc
Confidence 4322 122356788999999874
No 243
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.93 E-value=3e-26 Score=243.44 Aligned_cols=168 Identities=26% Similarity=0.504 Sum_probs=135.3
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc----hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD----GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. ++.||+|+++.... ...+.+.+|+++++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 4578999999999999999999984 88999999875432 234678899999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC---eEEcCCCCCCEEEcC--------CCcEEEE
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNP---VVHCDIKPSNILLDD--------DMVAHLS 868 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~---ivHrDlkp~NIll~~--------~~~~kL~ 868 (902)
||||+++++|.+++. ...+++..+..++.|++.|++||| ++| |+||||||+||+++. ++.+||+
T Consensus 84 v~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999884 346899999999999999999999 888 999999999999986 6789999
Q ss_pred eecCceecCCCccceeccccccccccccccc
Q 046199 869 DFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 869 DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
|||.++....... ....||+.|+|||++.
T Consensus 159 Dfg~~~~~~~~~~--~~~~~~~~y~aPE~~~ 187 (271)
T 3dtc_A 159 DFGLAREWHRTTK--MSAAGAYAWMAPEVIR 187 (271)
T ss_dssp CCCC---------------CCGGGSCHHHHH
T ss_pred cCCcccccccccc--cCCCCccceeCHHHhc
Confidence 9999987644322 2357999999999874
No 244
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.93 E-value=3.5e-26 Score=243.59 Aligned_cols=173 Identities=27% Similarity=0.466 Sum_probs=143.7
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (276)
T 2h6d_A 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF 87 (276)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence 45578999999999999999999986 58999999997542 233467889999999999999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 88 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999998654 45899999999999999999999 99999999999999999999999999999987654
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
... .....||+.|+|||++..
T Consensus 164 ~~~-~~~~~~~~~y~aPE~~~~ 184 (276)
T 2h6d_A 164 GEF-LRTSCGSPNYAAPEVISG 184 (276)
T ss_dssp --------------CCTGGGTT
T ss_pred Ccc-eecccCCccccCHHHHcC
Confidence 322 233568999999998753
No 245
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=3e-26 Score=251.08 Aligned_cols=174 Identities=26% Similarity=0.484 Sum_probs=143.8
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCe
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 796 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 796 (902)
+..++|++.+.||+|+||.||+|++.. +..||+|+++... ......+.+|+++++.++||||+++++++...+.
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 455788899999999999999998743 2469999997553 2345678999999999999999999999999999
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++..
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999999877777999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccc---eeccccccccccccccc
Q 046199 877 NGEESM---RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~---~~~~~gt~~y~APE~l~ 899 (902)
...... .....+|+.|+|||++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~ 223 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAIS 223 (333)
T ss_dssp -------------CCCGGGSCHHHHH
T ss_pred ccccccccccCCCCccccccCchhcc
Confidence 543221 11234678999999875
No 246
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.93 E-value=4.3e-26 Score=247.19 Aligned_cols=172 Identities=24% Similarity=0.309 Sum_probs=142.3
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc---hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+.+++.++||||+++++++..++..|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999986 588999999875432 234778999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998654 45899999999999999999999 999999999999999999999999999999876543
Q ss_pred cc-ceeccccccccccccccc
Q 046199 880 ES-MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~-~~~~~~gt~~y~APE~l~ 899 (902)
.. ......||+.|+|||++.
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~ 208 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFS 208 (309)
T ss_dssp ---------CCGGGCCGGGTC
T ss_pred ccccccccCCCcCccCHHHHc
Confidence 22 222356899999999875
No 247
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=6.3e-26 Score=253.69 Aligned_cols=170 Identities=28% Similarity=0.405 Sum_probs=140.5
Q ss_pred HhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeec-------
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN------- 793 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 793 (902)
....++|++.+.||+|+||.||+|++. +++.||+|++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 456789999999999999999999885 58999999986542 223479999999999999999999843
Q ss_pred -------------------------------CCeeEEEEEccCCCChHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHH
Q 046199 794 -------------------------------GNFKALVLEYMANGSLEKCLYS---SNRSLDIFQRLSIMIDVALALEYL 839 (902)
Q Consensus 794 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~L 839 (902)
....++||||+++ +|.+.+.. ....+++..+..++.||+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3458899999985 87776653 456799999999999999999999
Q ss_pred HccCCCCeEEcCCCCCCEEEc-CCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 840 HFGYSNPVVHCDIKPSNILLD-DDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 840 H~~~~~~ivHrDlkp~NIll~-~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
| ++||+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++..
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~ 215 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLG 215 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTT
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcC
Confidence 9 99999999999999997 688999999999987654433 334578999999998753
No 248
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.93 E-value=2.2e-26 Score=265.80 Aligned_cols=171 Identities=27% Similarity=0.444 Sum_probs=150.5
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4578999999999999999999986 58999999986542 3345788999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceec
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~ 876 (902)
||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||++ +.++.+||+|||+|+..
T Consensus 104 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999988654 46899999999999999999999 9999999999999999 56789999999999876
Q ss_pred CCCccceeccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
..... .....||+.|+|||++.
T Consensus 180 ~~~~~-~~~~~gt~~y~aPE~~~ 201 (484)
T 3nyv_A 180 EASKK-MKDKIGTAYYIAPEVLH 201 (484)
T ss_dssp CCCCS-HHHHTTGGGTCCHHHHH
T ss_pred ccccc-cccCCCCccccCceeec
Confidence 54432 33467999999999874
No 249
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.93 E-value=4.2e-26 Score=244.04 Aligned_cols=168 Identities=29% Similarity=0.490 Sum_probs=146.6
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeec---------
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN--------- 793 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 793 (902)
...+|++.+.||+|+||.||+|++. +++.||+|+++... +.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3468999999999999999999986 58999999987543 467789999999999999999998854
Q ss_pred -------CCeeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcE
Q 046199 794 -------GNFKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVA 865 (902)
Q Consensus 794 -------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (902)
....|+||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 45689999999999999999654 356899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCceecCCCccceeccccccccccccccc
Q 046199 866 HLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 866 kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
||+|||.+........ .....||+.|+|||++.
T Consensus 162 kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 194 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQIS 194 (284)
T ss_dssp EECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHH
T ss_pred EECcchhheecccccc-ccccCCcccccChhhhc
Confidence 9999999988765432 33456999999999874
No 250
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.93 E-value=5.4e-26 Score=249.66 Aligned_cols=170 Identities=33% Similarity=0.504 Sum_probs=138.7
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHH--HHhCCCCCccceeeeee-----cC
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEV--LKSVRHRNLVKIISSCS-----NG 794 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~ 794 (902)
.+..++|++.+.||+|+||.||+|++ +++.||||+++... .+.+..|.++ +..++||||+++++.+. ..
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred CcChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 34568999999999999999999987 68999999987542 2344445444 44589999999997542 33
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC---------CeEEcCCCCCCEEEcCCCcE
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN---------PVVHCDIKPSNILLDDDMVA 865 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~---------~ivHrDlkp~NIll~~~~~~ 865 (902)
...|+||||+++|+|.+++.... .++..+..++.||+.||+||| +. ||+||||||+||+++.++.+
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 46789999999999999996543 488899999999999999999 88 99999999999999999999
Q ss_pred EEEeecCceecCCCcc--------ceecccccccccccccccc
Q 046199 866 HLSDFGIAKLLNGEES--------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 866 kL~DFG~a~~~~~~~~--------~~~~~~gt~~y~APE~l~~ 900 (902)
||+|||+|+.+..... ......||+.|+|||++..
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcC
Confidence 9999999987653221 1223569999999998853
No 251
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.93 E-value=2e-26 Score=247.37 Aligned_cols=173 Identities=29% Similarity=0.472 Sum_probs=138.6
Q ss_pred HHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
.++..++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence 3566789999999999999999999864 369999987553 33457889999999999999999999965 455689
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999999777777999999999999999999999 99999999999999999999999999999976543
Q ss_pred Cc--cceeccccccccccccccc
Q 046199 879 EE--SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~--~~~~~~~gt~~y~APE~l~ 899 (902)
.. .......||+.|+|||++.
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~ 195 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIR 195 (289)
T ss_dssp -----------CCCTTCCHHHHC
T ss_pred ccccccccccCCCccccCchhhc
Confidence 22 1223356999999999874
No 252
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.93 E-value=3e-26 Score=244.84 Aligned_cols=173 Identities=25% Similarity=0.420 Sum_probs=145.5
Q ss_pred hhcccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
...++|++.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|+++++.++||||+++++++.++ ..
T Consensus 9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence 456889999999999999999998643 3469999987653 34567899999999999999999999998754 56
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
|+||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 8999999999999999877677999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCccc-eeccccccccccccccc
Q 046199 878 GEESM-RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~-~~~~~gt~~y~APE~l~ 899 (902)
..... .....+|+.|+|||++.
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~ 187 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESIN 187 (281)
T ss_dssp --------CCCCCGGGCCHHHHH
T ss_pred cccccccccCCCCcceeCchhhc
Confidence 43322 22345788999999874
No 253
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.93 E-value=3.4e-26 Score=242.87 Aligned_cols=169 Identities=20% Similarity=0.400 Sum_probs=147.7
Q ss_pred hhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecC--CeeE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG--NFKA 798 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 798 (902)
+..++|++.+.||+|+||.||+|++ +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred CCHHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 3457899999999999999999998 48899999997653 33456799999999999999999999999877 7889
Q ss_pred EEEEccCCCChHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 799 LVLEYMANGSLEKCLYSSNR-SLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
+||||+++|+|.+++..... .+++..+..++.|++.||+||| +++ |+||||||+||+++.++.++++|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999999976543 5899999999999999999999 889 99999999999999999999999998765
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
... ....||+.|+|||++..
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~ 182 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQK 182 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHS
T ss_pred ecc-----cCccCCccccChhhhcc
Confidence 332 22468999999998753
No 254
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.93 E-value=4e-26 Score=246.29 Aligned_cols=172 Identities=29% Similarity=0.455 Sum_probs=147.4
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 801 (902)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 368999999999999999999986 58999999987543 223467889999999999999999999999999999999
Q ss_pred EccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 802 EYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
||++ ++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 59999987653 45889999999999999999999 9999999999999999999999999999998765444
Q ss_pred cceecccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~~ 900 (902)
.......||+.|+|||++..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~ 177 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLG 177 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTT
T ss_pred cccCcccccccccCcHHhhc
Confidence 33344578999999998753
No 255
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.93 E-value=2.1e-26 Score=255.41 Aligned_cols=172 Identities=28% Similarity=0.392 Sum_probs=149.0
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
...++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++..++..|+|
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 34578999999999999999999986 48999999998653 34457889999999999999999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
|||+++++|.+++... ..+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++......
T Consensus 110 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp ECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999998654 35899999999999999999999 75 9999999999999999999999999999765321
Q ss_pred ccceecccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~~ 900 (902)
......||+.|+|||++..
T Consensus 186 --~~~~~~gt~~y~aPE~~~~ 204 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQG 204 (360)
T ss_dssp --C----CCCCTTCCHHHHTT
T ss_pred --cccCCCCCCCeECHHHHcC
Confidence 2233579999999998754
No 256
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=6.6e-29 Score=295.29 Aligned_cols=351 Identities=13% Similarity=0.081 Sum_probs=172.4
Q ss_pred CCCCCceEeccCcccccCCCcCCccc-CCCcccceeeccCcc--CCC-CCCccccccccccEEEccCC-cccCccccccc
Q 046199 262 NMSTLKALSLLNNTLSGSLPSSSKNL-IGLPNIERLNLGLNN--LSG-RIPGFIFNASKLFLLELTGN-SFSGFIPDTLV 336 (902)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~l~~L~~L~Ls~N~--l~~-~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~l~ 336 (902)
++++|++|+|++|.+++..+.++..+ ..+++|++|++++|. +.. .++..+..+++|++|++++| .+.+ ++..+.
T Consensus 154 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~ 232 (594)
T 2p1m_B 154 TCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQ 232 (594)
T ss_dssp HCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHH
T ss_pred hCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHh
Confidence 34444444444444443322222111 134455555555554 110 01111223456666666665 3332 455555
Q ss_pred ccccccEEecccccCCCCCCcc-cccccccCCCCCcee-eeccCCCCcccCcccccccccccEEEeecCcccccCC-ccc
Q 046199 337 NLRNLEHLGLGYNYLTSSTPEL-SFLSSLANSSSSKYI-VLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIP-KEI 413 (902)
Q Consensus 337 ~l~~L~~L~Ls~N~l~~~~~~~-~~l~~l~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p-~~~ 413 (902)
.+++|++|+++.+...-..... .....+.++++|+.| .+.+... ..++..+..++ +|++|+|++|.+++... ..+
T Consensus 233 ~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~~~~l~~~~l~~~~ 310 (594)
T 2p1m_B 233 RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLSYATVQSYDLVKLL 310 (594)
T ss_dssp HCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECTTCCCCHHHHHHHH
T ss_pred cCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEccCCCCCHHHHHHHH
Confidence 5666666664433210000000 001234555566655 2332221 23344444455 77777777777654322 224
Q ss_pred CCCCCCcEEEeecceeccc-CCcccccccccCeeeccc---------ccccCCCC----CcCCCCCeEeccCccccCCCC
Q 046199 414 GNLVNLTTLHLGNNQLSGS-IPITVGRLNTLQGLGLEN---------NKLEGPIP----DDLCQLSELHVDHNKLSGPIP 479 (902)
Q Consensus 414 ~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~l~~~~p----~~l~~L~~L~L~~N~l~~~~p 479 (902)
..+++|++|++++| +... ++.....+++|++|++++ +.+++... ..+.+|+.|.++.|.+++..+
T Consensus 311 ~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 311 CQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp TTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred hcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 56778888888877 4322 222333467777777743 33332111 123466666666666655444
Q ss_pred cccc-CCCcCceEecC--C----CCccCc-----ccccccCCCCceEEEcCCCccCCCCcccccc-ccccceeccCCccc
Q 046199 480 ACFG-NLNSLRNLSLG--S----NELSSF-----IPSTFWNLNNILSFDFSSNSLNGSLPLDIGN-MKVVVEINLSRNYL 546 (902)
Q Consensus 480 ~~~~-~l~~L~~L~L~--~----N~l~~~-----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l 546 (902)
..+. .+++|+.|+++ + |+++.. ++..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 4443 46667777776 3 444421 112245566667777655 444433333433 56666666666666
Q ss_pred cccCcccc-ccCCccceEEccCcccCCCccc-cccccccCCeEeCcCccccccCCccc-ccccccccccccCCc
Q 046199 547 TGDIPTTI-GGLTNLQLLSLENNRLHGPIPE-SFGALTSLESLDLSVNNLSGVIPISL-EKLVYLKDLNLSFNR 617 (902)
Q Consensus 547 ~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~l~~N~ 617 (902)
++..+..+ ..+++|+.|+|++|++++..+. .+..+++|+.|++++|+++......+ ..++.|+...+..+.
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 55444444 4566677777777766543333 23346667777777766643333333 334555544444443
No 257
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.93 E-value=1.2e-25 Score=244.74 Aligned_cols=170 Identities=25% Similarity=0.425 Sum_probs=145.3
Q ss_pred ccc-cccCeecccceeeEEEEEeC-----CCcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCccceeeeeec--CCe
Q 046199 726 DHF-SEKSLIGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSN--GNF 796 (902)
Q Consensus 726 ~~y-~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 796 (902)
++| ++.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|+++++.++||||+++++++.+ ...
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 444 99999999999999998653 478899999976532 445778999999999999999999999987 467
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.++||||+++++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++..
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 89999999999999999654 4899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCccc---eecccccccccccccccc
Q 046199 877 NGEESM---RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~~~---~~~~~gt~~y~APE~l~~ 900 (902)
...... .....+|+.|+|||++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~ 211 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKE 211 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcC
Confidence 654322 223568889999998753
No 258
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.93 E-value=1.3e-26 Score=250.63 Aligned_cols=177 Identities=27% Similarity=0.385 Sum_probs=132.2
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
.+.+..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence 34567789999999999999999999875 48899999886543 33456788999999999999999999999999999
Q ss_pred EEEEEccCCCChHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEee
Q 046199 798 ALVLEYMANGSLEKCLYS-------SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDF 870 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 870 (902)
++||||+++++|.+++.. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEec
Confidence 999999999999999864 2455899999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCcc-----ceeccccccccccccccc
Q 046199 871 GIAKLLNGEES-----MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 871 G~a~~~~~~~~-----~~~~~~gt~~y~APE~l~ 899 (902)
|.+........ ......||+.|+|||++.
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 199 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHH
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhc
Confidence 99876543221 122356899999999874
No 259
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=2.3e-26 Score=255.40 Aligned_cols=171 Identities=25% Similarity=0.420 Sum_probs=136.3
Q ss_pred ccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeee-cCCeeEE
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCS-NGNFKAL 799 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 799 (902)
..|++.+.||+|+||.||+|++.+ +..||+|.++... ....+.+.+|+.++++++||||+++++++. .++..|+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 457788999999999999998642 2468999886543 345678999999999999999999999864 4568899
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||||+++|+|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877777899999999999999999999 999999999999999999999999999999866433
Q ss_pred ccc----eeccccccccccccccc
Q 046199 880 ESM----RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~~----~~~~~gt~~y~APE~l~ 899 (902)
... .....+|+.|+|||++.
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~ 269 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQ 269 (373)
T ss_dssp ------------CCGGGSCHHHHH
T ss_pred ccccccccCCCCCcccccChHHhc
Confidence 211 12345788999999874
No 260
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.93 E-value=1.7e-26 Score=246.45 Aligned_cols=173 Identities=28% Similarity=0.437 Sum_probs=147.1
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeee--cCCeeEE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCS--NGNFKAL 799 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 799 (902)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .++..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 578999999999999999999986 48999999997543 344577899999999999999999999874 4678999
Q ss_pred EEEccCCCChHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCC-----eEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 800 VLEYMANGSLEKCLYSS---NRSLDIFQRLSIMIDVALALEYLHFGYSNP-----VVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
||||+++++|.+++... ...+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998653 345899999999999999999999 888 9999999999999999999999999
Q ss_pred CceecCCCccceecccccccccccccccc
Q 046199 872 IAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 872 ~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.++.............||+.|+|||++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 190 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNR 190 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHC
T ss_pred hheeeccccccccccCCCccccChHHhcc
Confidence 99876544333334578999999998753
No 261
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=1.5e-26 Score=269.94 Aligned_cols=160 Identities=19% Similarity=0.167 Sum_probs=126.4
Q ss_pred eecccceeeEEEEEeC-CCcEEEEEEeeecc----------chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEE
Q 046199 733 LIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF----------DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 733 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 800 (902)
..+.|++|.+..++.. -|+.||+|++.... +...+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3456666666655432 38889999997542 22346799999999999 699999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||++|++|.+++.+. ..+++. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999999654 446653 58999999999999 9999999999999999999999999999999876655
Q ss_pred cceeccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~ 899 (902)
....+.+||++|||||++.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~ 412 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFA 412 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-
T ss_pred ccccCceechhhccHHHhC
Confidence 5556678999999999875
No 262
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.93 E-value=5.8e-26 Score=247.78 Aligned_cols=169 Identities=28% Similarity=0.409 Sum_probs=142.4
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--------chhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--------DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
.++|++.+.||+|+||.||+|++.. ++.||||++.... ......+.+|+++++.++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 4689999999999999999999865 8899999986432 122356889999999999999999999997665
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecC
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV---AHLSDFGI 872 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---~kL~DFG~ 872 (902)
.|+||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 7999999999999998854 456899999999999999999999 999999999999999987654 99999999
Q ss_pred ceecCCCccceeccccccccccccccc
Q 046199 873 AKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 873 a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
++....... .....||+.|+|||++.
T Consensus 164 ~~~~~~~~~-~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 164 SKILGETSL-MRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp CEECCCCHH-HHHHHSCCTTCCHHHHH
T ss_pred ceecccccc-cccccCCcCccCchhhc
Confidence 987654322 23356999999999874
No 263
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.93 E-value=1.5e-25 Score=245.49 Aligned_cols=166 Identities=22% Similarity=0.396 Sum_probs=145.3
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeec--CCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSN--GNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++.. ..+.+.+|+++++.++ ||||+++++++.+ ....++
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 3478999999999999999999875 5899999998743 3467899999999997 9999999999987 667899
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC-cEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM-VAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL~DFG~a~~~~~ 878 (902)
||||+++++|.+++. .+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+|+....
T Consensus 111 v~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999999999874 3789999999999999999999 99999999999999999776 899999999987654
Q ss_pred Cccceecccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~~ 900 (902)
... .....||+.|+|||++..
T Consensus 184 ~~~-~~~~~~~~~y~aPE~~~~ 204 (330)
T 3nsz_A 184 GQE-YNVRVASRYFKGPELLVD 204 (330)
T ss_dssp TCC-CCSCCSCGGGCCHHHHTT
T ss_pred CCc-cccccccccccChhhhcC
Confidence 433 334679999999998754
No 264
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.93 E-value=1.6e-26 Score=257.95 Aligned_cols=169 Identities=17% Similarity=0.197 Sum_probs=137.2
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeec---cchhhhhHHHHHH---HHHhCCCCCcccee-------e
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQ---FDGALKSFDAECE---VLKSVRHRNLVKII-------S 789 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~ 789 (902)
..++|++.+.||+|+||.||+|++. +++.||||+++.. .....+.+.+|+. +++.++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 4578999999999999999999974 5899999999743 3345678899995 45555799999998 5
Q ss_pred eeecCC-----------------eeEEEEEccCCCChHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 046199 790 SCSNGN-----------------FKALVLEYMANGSLEKCLYSSNR------SLDIFQRLSIMIDVALALEYLHFGYSNP 846 (902)
Q Consensus 790 ~~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 846 (902)
++..++ ..|+||||+ +|+|.+++..... .+++..+..++.||+.||+||| ++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCC
Confidence 555443 278999999 5799999875322 1224778889999999999999 999
Q ss_pred eEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 847 VVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++..
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~ 276 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEAR 276 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcc
Confidence 99999999999999999999999999986432 3344567 99999999753
No 265
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=3.8e-26 Score=245.19 Aligned_cols=171 Identities=25% Similarity=0.314 Sum_probs=134.1
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc--hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
+..++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.++...++.++||||+++++++.+++..++
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 45689999999999999999999985 589999999975532 223344455556888899999999999999999999
Q ss_pred EEEccCCCChHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 800 VLEYMANGSLEKCLYS---SNRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
||||+++ ++.+++.. ....+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||.|+.
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 9999975 88777654 4567999999999999999999999 87 999999999999999999999999999987
Q ss_pred cCCCccceecccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLW 898 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l 898 (902)
...... .....||+.|+|||++
T Consensus 160 ~~~~~~-~~~~~~t~~y~aPE~~ 181 (290)
T 3fme_A 160 LVDDVA-KDIDAGCKPYMAPERI 181 (290)
T ss_dssp -----------CCCCCCSCHHHH
T ss_pred cccccc-ccccCCCccccChhhc
Confidence 654332 2335799999999996
No 266
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.93 E-value=6.6e-26 Score=243.54 Aligned_cols=175 Identities=26% Similarity=0.413 Sum_probs=145.9
Q ss_pred HHHhhcccccccC-eecccceeeEEEEEeC---CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec
Q 046199 720 ELLLATDHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN 793 (902)
Q Consensus 720 ~~~~~~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 793 (902)
++....++|++.+ .||+|+||.||+|.+. .++.||||+++... ....+.+.+|+++++.++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 4445667899988 9999999999999653 36889999997543 23457899999999999999999999999 5
Q ss_pred CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 794 GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 794 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
.+..++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 56789999999999999999764 45899999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCcccee---ccccccccccccccc
Q 046199 874 KLLNGEESMRT---QTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~---~~~gt~~y~APE~l~ 899 (902)
........... ...+++.|+|||++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 193 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECIN 193 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHH
T ss_pred eeeccCCCcccccccCCCCceeeChHHhc
Confidence 87754433221 234678999999874
No 267
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.93 E-value=1.8e-25 Score=239.97 Aligned_cols=170 Identities=28% Similarity=0.416 Sum_probs=145.7
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec----CCe
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNF 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~ 796 (902)
..+.|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 34568899999999999999998864 8899999987543 3456788999999999999999999998864 466
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEc-CCCcEEEEeecCc
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLD-DDMVAHLSDFGIA 873 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~-~~~~~kL~DFG~a 873 (902)
.++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 89999999999999999654 45899999999999999999999 888 99999999999997 7889999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
...... ......||+.|+|||++.
T Consensus 180 ~~~~~~--~~~~~~~t~~y~aPE~~~ 203 (290)
T 1t4h_A 180 TLKRAS--FAKAVIGTPEFMAPEMYE 203 (290)
T ss_dssp GGCCTT--SBEESCSSCCCCCGGGGG
T ss_pred cccccc--ccccccCCcCcCCHHHHh
Confidence 754432 233457999999999864
No 268
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.93 E-value=5.1e-26 Score=247.16 Aligned_cols=180 Identities=23% Similarity=0.463 Sum_probs=140.9
Q ss_pred CHHHHHhhcccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeee
Q 046199 717 SYRELLLATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISS 790 (902)
Q Consensus 717 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~ 790 (902)
.++++.+..++|.+.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|+.++++++||||++++++
T Consensus 25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 104 (313)
T 3brb_A 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104 (313)
T ss_dssp CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence 345556778899999999999999999997642 4589999987543 3345778999999999999999999999
Q ss_pred eecCC-----eeEEEEEccCCCChHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc
Q 046199 791 CSNGN-----FKALVLEYMANGSLEKCLYS-----SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD 860 (902)
Q Consensus 791 ~~~~~-----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (902)
+.+.+ ..++||||+++++|.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~ 181 (313)
T 3brb_A 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLR 181 (313)
T ss_dssp EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEEC
T ss_pred EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEc
Confidence 97654 35999999999999999843 3356899999999999999999999 99999999999999999
Q ss_pred CCCcEEEEeecCceecCCCccc--eeccccccccccccccc
Q 046199 861 DDMVAHLSDFGIAKLLNGEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 861 ~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
.++.+||+|||+++........ .....+++.|+|||++.
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 222 (313)
T 3brb_A 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA 222 (313)
T ss_dssp TTSCEEECSCSCC----------------CCGGGSCHHHHH
T ss_pred CCCcEEEeecCcceecccccccCcccccCCCccccCchhhc
Confidence 9999999999999876543321 22245788999999874
No 269
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.93 E-value=7.3e-26 Score=247.44 Aligned_cols=177 Identities=22% Similarity=0.309 Sum_probs=147.5
Q ss_pred HHHhhccccccc-CeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCC-CCCccceeeeeecC
Q 046199 720 ELLLATDHFSEK-SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVR-HRNLVKIISSCSNG 794 (902)
Q Consensus 720 ~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 794 (902)
......++|.+. +.||+|+||.||+|++.. ++.||+|+++... ......+.+|+.+++.++ ||||+++++++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 344556778887 899999999999999864 8999999987543 234578899999999995 69999999999999
Q ss_pred CeeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEee
Q 046199 795 NFKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDF 870 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DF 870 (902)
+..|+||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+||
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999988543 356899999999999999999999 999999999999999988 789999999
Q ss_pred cCceecCCCccceecccccccccccccccc
Q 046199 871 GIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 871 G~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|+++....... .....||+.|+|||++..
T Consensus 179 g~a~~~~~~~~-~~~~~gt~~y~aPE~~~~ 207 (327)
T 3lm5_A 179 GMSRKIGHACE-LREIMGTPEYLAPEILNY 207 (327)
T ss_dssp GGCEEC----------CCCGGGCCHHHHTT
T ss_pred ccccccCCccc-cccccCCcCccCCeeecC
Confidence 99987654332 233679999999998753
No 270
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.93 E-value=4.9e-26 Score=248.68 Aligned_cols=172 Identities=27% Similarity=0.420 Sum_probs=140.0
Q ss_pred hcccccccCeecccceeeEEEEEeCC-Cc----EEEEEEeeec-cchhhhhHHHHHHHHHhCCCCCccceeeeeecCCee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GM----EVAIKVFHLQ-FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 797 (902)
..++|++.+.||+|+||.||+|++.. ++ +||+|.++.. .....+.+.+|+.+++.++||||+++++++..++ .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 45789999999999999999998754 44 3577776543 2345678999999999999999999999998765 7
Q ss_pred EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 798 ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
++|+||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+...
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 8999999999999999887778999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCccc--eeccccccccccccccc
Q 046199 878 GEESM--RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 878 ~~~~~--~~~~~gt~~y~APE~l~ 899 (902)
..... .....+|+.|+|||++.
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~ 192 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESIL 192 (327)
T ss_dssp -----------CCCGGGSCHHHHH
T ss_pred CccccccccCCCccccccCHHHHc
Confidence 43322 22245788999999874
No 271
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.93 E-value=8.8e-26 Score=244.44 Aligned_cols=169 Identities=29% Similarity=0.456 Sum_probs=137.0
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEc
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
..++|++.+.||+|+||.||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 457899999999999999999988 4788999998643 345788999999999999999999999874 47899999
Q ss_pred cCCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-EEEEeecCceecCCCc
Q 046199 804 MANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV-AHLSDFGIAKLLNGEE 880 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~-~kL~DFG~a~~~~~~~ 880 (902)
+++++|.+++..... .+++..+..++.|++.||+|||..+.+||+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 999999999976443 4788999999999999999999221289999999999999998886 799999999765432
Q ss_pred cceecccccccccccccccc
Q 046199 881 SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~~~~~gt~~y~APE~l~~ 900 (902)
.....||+.|+|||++..
T Consensus 160 --~~~~~gt~~y~aPE~~~~ 177 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEG 177 (307)
T ss_dssp -------CCTTSSCHHHHTC
T ss_pred --cccCCCCCceEChhhhCC
Confidence 223469999999998753
No 272
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.93 E-value=1.4e-26 Score=269.87 Aligned_cols=175 Identities=27% Similarity=0.447 Sum_probs=150.4
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
.+.+..++|++.+.||+|+||.||+|++.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..|+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 34567789999999999999999999998888899999976532 34789999999999999999999999876 67899
Q ss_pred EEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+++....
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999999653 345899999999999999999999 99999999999999999999999999999987643
Q ss_pred Ccc-ceeccccccccccccccc
Q 046199 879 EES-MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~-~~~~~~gt~~y~APE~l~ 899 (902)
... ......++..|+|||++.
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~ 437 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAAL 437 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHH
T ss_pred CceecccCCcCcccccCHHHhc
Confidence 221 112245678999999874
No 273
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.93 E-value=5.8e-26 Score=249.43 Aligned_cols=174 Identities=23% Similarity=0.302 Sum_probs=136.2
Q ss_pred HHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeee-------
Q 046199 721 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSC------- 791 (902)
Q Consensus 721 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~------- 791 (902)
+.....+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3456679999999999999999999985 48999999997776666778899999999996 99999999998
Q ss_pred -ecCCeeEEEEEccCCCChHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEE
Q 046199 792 -SNGNFKALVLEYMANGSLEKCLYS--SNRSLDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNILLDDDMVAH 866 (902)
Q Consensus 792 -~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~~~k 866 (902)
......++||||++ |+|.+++.. ....+++..+..++.||+.||+||| +.+ |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEE
Confidence 34456899999996 699888865 3456999999999999999999999 888 99999999999999999999
Q ss_pred EEeecCceecCCCccc------------eecccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESM------------RTQTLGTIGYMAPGLW 898 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~------------~~~~~gt~~y~APE~l 898 (902)
|+|||+++........ .....||+.|+|||++
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222 (337)
T ss_dssp BCCCTTCBCCSSCC------------------------------
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence 9999999876543221 1134589999999987
No 274
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1e-25 Score=242.86 Aligned_cols=171 Identities=25% Similarity=0.405 Sum_probs=145.2
Q ss_pred cccccCeecccceeeEEEEEeCC----CcEEEEEEeeeccc-hhhhhHHHHHHHHHhCCCCCccceeeeeecCCee-EEE
Q 046199 727 HFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK-ALV 800 (902)
Q Consensus 727 ~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 800 (902)
.|+..+.||+|+||.||+|++.+ +..||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 56677999999999999998643 33799999875433 4457889999999999999999999999766554 999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||+.+++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999877777899999999999999999999 9999999999999999999999999999998654322
Q ss_pred c----ceecccccccccccccccc
Q 046199 881 S----MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~----~~~~~~gt~~y~APE~l~~ 900 (902)
. ......+|+.|+|||++..
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~ 202 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQT 202 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTT
T ss_pred ccccccCcCCCCCccccChhhhcc
Confidence 1 1223568899999998754
No 275
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.93 E-value=1.2e-25 Score=250.05 Aligned_cols=168 Identities=26% Similarity=0.324 Sum_probs=135.7
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCC------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------ 795 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 795 (902)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 578999999999999999999886 48899999997543 334567889999999999999999999997654
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..|+||||+++ +|.+++. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 7888774 34889999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..... ......||+.|+|||++..
T Consensus 177 ~~~~~-~~~~~~gt~~y~aPE~~~~ 200 (371)
T 2xrw_A 177 AGTSF-MMTPYVVTRYYRAPEVILG 200 (371)
T ss_dssp --------------CTTCCHHHHTT
T ss_pred ccccc-ccCCceecCCccCHHHhcC
Confidence 64332 2334679999999999754
No 276
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.93 E-value=2e-25 Score=241.51 Aligned_cols=172 Identities=24% Similarity=0.379 Sum_probs=144.0
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc----chhhhhHHHHHHHHHhCCCCCccceeeee--ecCCee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHRNLVKIISSC--SNGNFK 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 797 (902)
.++|++.+.||+|+||.||+|.+.. ++.||+|+++... ....+.+.+|+++++.++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 4789999999999999999999854 8899999997542 23457889999999999999999999998 445688
Q ss_pred EEEEEccCCCChHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 798 ALVLEYMANGSLEKCLYS-SNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
|+||||++++ +.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 7666654 3456899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCc--cceecccccccccccccccc
Q 046199 877 NGEE--SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 877 ~~~~--~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .......||+.|+|||++..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~ 185 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANG 185 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTC
T ss_pred CccccccccccCCCCCCCcChhhccC
Confidence 5322 22234569999999998753
No 277
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.93 E-value=4.9e-26 Score=252.30 Aligned_cols=168 Identities=26% Similarity=0.390 Sum_probs=128.4
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecC------
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG------ 794 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 794 (902)
..++|++.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3478999999999999999999875 48899999987543 23457788999999999999999999998654
Q ss_pred CeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 795 NFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 795 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
...|+||||+ +++|.+++.. ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+|+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5689999999 6799998854 46899999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCccceecccccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..... .....||+.|+|||++..
T Consensus 181 ~~~~~---~~~~~~t~~y~aPE~~~~ 203 (367)
T 2fst_X 181 HTADE---MTGYVATRWYRAPEIMLN 203 (367)
T ss_dssp -------------CCCTTCCHHHHTT
T ss_pred ccccc---CCCcCcCcCccChHHHcC
Confidence 75432 234679999999998754
No 278
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.93 E-value=1.4e-26 Score=250.40 Aligned_cols=170 Identities=28% Similarity=0.450 Sum_probs=132.9
Q ss_pred cccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHh--CCCCCccceeeeeecCC----eeE
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSNGN----FKA 798 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 798 (902)
.++|++.+.||+|+||.||+|++ +++.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 46899999999999999999987 4889999998643 33567778888887 78999999999998776 789
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
+||||+++|+|.+++... .+++..+..++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999653 467788899999999999999921 2679999999999999999999999999999
Q ss_pred eecCCCccce----ecccccccccccccccc
Q 046199 874 KLLNGEESMR----TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~~~~----~~~~gt~~y~APE~l~~ 900 (902)
+......... ....||+.|+|||++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 186 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTT
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcC
Confidence 7665443321 22479999999998753
No 279
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=9.3e-29 Score=294.00 Aligned_cols=163 Identities=10% Similarity=0.026 Sum_probs=99.1
Q ss_pred CCCCcEEEeecceecccCCcccc-cccccCeeecccccccCCCCCcCCCCCeEeccCccccC-----CCCccccCCCcCc
Q 046199 416 LVNLTTLHLGNNQLSGSIPITVG-RLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKLSG-----PIPACFGNLNSLR 489 (902)
Q Consensus 416 l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~ 489 (902)
+++|+.|+++.|.+++..+..+. .+++|+.|+++.|...+ -|.+++ .++..+..+++|+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~---------------~~~l~~~~~~~~~~~l~~~~~~L~ 435 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA---------------PDYLTLEPLDIGFGAIVEHCKDLR 435 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC---------------CCTTTCCCTHHHHHHHHHHCTTCC
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC---------------cccccCCchhhHHHHHHhhCCCcc
Confidence 56666666666666654444443 35666666666211000 022221 1122355667788
Q ss_pred eEecCCCCccCcccccccC-CCCceEEEcCCCccCCCCcccc-ccccccceeccCCccccccCcc-ccccCCccceEEcc
Q 046199 490 NLSLGSNELSSFIPSTFWN-LNNILSFDFSSNSLNGSLPLDI-GNMKVVVEINLSRNYLTGDIPT-TIGGLTNLQLLSLE 566 (902)
Q Consensus 490 ~L~L~~N~l~~~~~~~~~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls 566 (902)
.|++++ .+++..+..+.. +++|++|++++|.+++..+..+ ..+++|++|+|++|.+++..+. .+..+++|+.|+++
T Consensus 436 ~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~ 514 (594)
T 2p1m_B 436 RLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMS 514 (594)
T ss_dssp EEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEE
T ss_pred EEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeee
Confidence 888866 666555555554 7778888888888765444444 5578888888888888654444 34458899999999
Q ss_pred CcccCCCccccc-cccccCCeEeCcCccc
Q 046199 567 NNRLHGPIPESF-GALTSLESLDLSVNNL 594 (902)
Q Consensus 567 ~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 594 (902)
+|+++......+ ..+++|+...+..+.-
T Consensus 515 ~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 515 SCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp SSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred CCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 998854434444 4567777766665543
No 280
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.93 E-value=1.7e-25 Score=248.49 Aligned_cols=170 Identities=26% Similarity=0.342 Sum_probs=145.6
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecC-----Ce
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----NF 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 796 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999986 48889999997543 33457889999999999999999999998654 46
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||+++ +|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++..
T Consensus 105 ~~iv~e~~~~-~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKT--QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCSE-EHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccCc-CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 8999999975 99998865 35899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccc---eeccccccccccccccc
Q 046199 877 NGEESM---RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~---~~~~~gt~~y~APE~l~ 899 (902)
...... .....||+.|+|||++.
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~ 204 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIML 204 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhc
Confidence 533221 23357999999999864
No 281
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.93 E-value=5.6e-26 Score=250.33 Aligned_cols=172 Identities=22% Similarity=0.226 Sum_probs=139.1
Q ss_pred hcccccccCeecccceeeEEEEEeC----CCcEEEEEEeeeccch-----------hhhhHHHHHHHHHhCCCCCcccee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQFDG-----------ALKSFDAECEVLKSVRHRNLVKII 788 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~ 788 (902)
..++|++.+.||+|+||.||+|++. .+..||+|++...... ....+.+|+..++.++||||++++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 4578999999999999999999986 4778999998755321 123466788899999999999999
Q ss_pred eeeec----CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC-
Q 046199 789 SSCSN----GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM- 863 (902)
Q Consensus 789 ~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~- 863 (902)
+++.. .+..|+||||+ +++|.+++.... .+++..+..++.||+.||+||| ++||+||||||+||+++.++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSST
T ss_pred cccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCC
Confidence 99877 78899999999 999999986544 6899999999999999999999 99999999999999998887
Q ss_pred -cEEEEeecCceecCCCcc-------ceecccccccccccccccc
Q 046199 864 -VAHLSDFGIAKLLNGEES-------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 864 -~~kL~DFG~a~~~~~~~~-------~~~~~~gt~~y~APE~l~~ 900 (902)
.+||+|||+|+.+..... ......||+.|+|||++..
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 234 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG 234 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC
Confidence 999999999987643221 1133579999999998754
No 282
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.93 E-value=9.7e-26 Score=246.59 Aligned_cols=172 Identities=28% Similarity=0.445 Sum_probs=142.9
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcE--EEEEEeeecc-chhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GME--VAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 798 (902)
..++|++.+.||+|+||.||+|++.. +.. ||+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..|
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 34789999999999999999998754 554 4999887532 33457789999999999 8999999999999999999
Q ss_pred EEEEccCCCChHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC
Q 046199 799 LVLEYMANGSLEKCLYSSN---------------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDM 863 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (902)
+||||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC
Confidence 9999999999999997543 36899999999999999999999 99999999999999999999
Q ss_pred cEEEEeecCceecCCCccceeccccccccccccccc
Q 046199 864 VAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 864 ~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.+||+|||+++...... ......+++.|+|||++.
T Consensus 180 ~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 214 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLN 214 (327)
T ss_dssp CEEECCTTCEESSCEEC-CC----CCTTTCCHHHHH
T ss_pred eEEEcccCcCccccccc-cccCCCCCccccChhhhc
Confidence 99999999997533211 122245788999999874
No 283
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.93 E-value=2.1e-25 Score=240.23 Aligned_cols=171 Identities=26% Similarity=0.427 Sum_probs=142.2
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeee-ecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC-SNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+++++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 4578999999999999999999974 58899999876543 235688999999999988877666655 6778889999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~ 878 (902)
||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+|+....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999876777999999999999999999999 9999999999999999 7889999999999987654
Q ss_pred Ccc-------ceecccccccccccccccc
Q 046199 879 EES-------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~-------~~~~~~gt~~y~APE~l~~ 900 (902)
... ......||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 189 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLG 189 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred cccCccCCCCcccccCCCccccchHHhcC
Confidence 432 1223579999999998754
No 284
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=7.1e-26 Score=267.59 Aligned_cols=172 Identities=24% Similarity=0.436 Sum_probs=142.1
Q ss_pred hcccccccC-eecccceeeEEEEEeC---CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeE
Q 046199 724 ATDHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 724 ~~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
..+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..|
T Consensus 333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344555555 7999999999999874 36679999997653 3456789999999999999999999999976 5689
Q ss_pred EEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 799 LVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
+||||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 412 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999999777777999999999999999999999 99999999999999999999999999999987643
Q ss_pred Cccce---eccccccccccccccc
Q 046199 879 EESMR---TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~~---~~~~gt~~y~APE~l~ 899 (902)
..... ....+|+.|+|||++.
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~ 512 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECIN 512 (613)
T ss_dssp -------------CCTTSCHHHHH
T ss_pred CCceeeeccCCCCccceeCHhhhc
Confidence 33211 1234568999999875
No 285
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.92 E-value=6.7e-26 Score=249.34 Aligned_cols=173 Identities=25% Similarity=0.329 Sum_probs=146.3
Q ss_pred HhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHH-HHhCCCCCccceeeeeecCCeeE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEV-LKSVRHRNLVKIISSCSNGNFKA 798 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~ 798 (902)
....++|++.+.||+|+||.||+|++. +++.||||+++... .....++..|..+ ++.++||||+++++++..++..|
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 456688999999999999999999985 58999999997553 2334555566665 77789999999999999999999
Q ss_pred EEEEccCCCChHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 799 LVLEYMANGSLEKCLYS---SNRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
+||||+++ +|.+++.. ....+++..+..++.||+.||+||| ++ ||+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999976 99888764 4567999999999999999999999 76 99999999999999999999999999998
Q ss_pred ecCCCccceeccccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
...... ......||+.|+|||++.
T Consensus 203 ~~~~~~-~~~~~~gt~~y~aPE~~~ 226 (340)
T 3an0_A 203 YLVDSV-AKTIDAGCKPYMAPERIN 226 (340)
T ss_dssp HHSCHH-HHHHSSCCCCCCCHHHHS
T ss_pred eccccc-ccccCCCCccccCccccc
Confidence 764322 223357999999999863
No 286
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.92 E-value=1e-25 Score=242.06 Aligned_cols=173 Identities=24% Similarity=0.359 Sum_probs=139.2
Q ss_pred hhcccccccCeecccceeeEEEEEeC--CCc--EEEEEEeeecc---chhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL--DGM--EVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
+..++|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|+++++.++||||+++++++..++
T Consensus 15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 94 (291)
T 1u46_A 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP 94 (291)
T ss_dssp CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC
Confidence 34578999999999999999999863 233 68999987542 345678899999999999999999999998765
Q ss_pred eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 796 FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
.++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++..
T Consensus 95 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp -CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred -ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 78999999999999999776667899999999999999999999 99999999999999999999999999999988
Q ss_pred cCCCccce---eccccccccccccccc
Q 046199 876 LNGEESMR---TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~~---~~~~gt~~y~APE~l~ 899 (902)
........ ....+|+.|+|||++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~ 197 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLK 197 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred ccccccchhhhccCCCCceeeCchhhc
Confidence 75443321 2245788999999874
No 287
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.1e-24 Score=231.19 Aligned_cols=206 Identities=27% Similarity=0.290 Sum_probs=136.7
Q ss_pred ccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCccc
Q 046199 395 LEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNKL 474 (902)
Q Consensus 395 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~l 474 (902)
.+.++++++.++ .+|..+. +++++|+|++|++++..+..|..+++|++|++++|+++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------- 74 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-------------------- 74 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS--------------------
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC--------------------
Confidence 445555555555 2333332 35556666666655444445555555554444444443
Q ss_pred cCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCcccc
Q 046199 475 SGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTI 554 (902)
Q Consensus 475 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 554 (902)
+..+..|.++++|++|++++|+++++.+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|
T Consensus 75 -~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 153 (270)
T 2o6q_A 75 -TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVF 153 (270)
T ss_dssp -CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred -eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHc
Confidence 2333445566666666666666666655666666667777777777766666666777777777777777776666667
Q ss_pred ccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 555 GGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|.+.++.
T Consensus 154 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 7888888888888888876677788888888888888888876666778888888888888888877653
No 288
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.92 E-value=3.3e-25 Score=238.69 Aligned_cols=171 Identities=26% Similarity=0.429 Sum_probs=145.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeee-ecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC-SNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+.+++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 3578999999999999999999974 58999999987543 235788999999999988866665554 6678889999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~ 878 (902)
||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 88999999866677999999999999999999999 9999999999999999 4888999999999987755
Q ss_pred Cccc-------eecccccccccccccccc
Q 046199 879 EESM-------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~-------~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 189 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLG 189 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred cccccccccccccccccccccCChhhhcC
Confidence 4321 233579999999998754
No 289
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.92 E-value=1.7e-25 Score=253.42 Aligned_cols=170 Identities=21% Similarity=0.314 Sum_probs=145.7
Q ss_pred hhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhC------CCCCccceeeeeecCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSV------RHRNLVKIISSCSNGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~ 795 (902)
....+|++.+.||+|+||.||+|++.. ++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++...+
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 345689999999999999999998865 889999999754 23446777888888877 5779999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--EEEEeecC
Q 046199 796 FKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV--AHLSDFGI 872 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--~kL~DFG~ 872 (902)
..++||||++ ++|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999996 58999887654 45899999999999999999999 999999999999999999887 99999999
Q ss_pred ceecCCCccceecccccccccccccccc
Q 046199 873 AKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 873 a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|+..... .....||+.|+|||++..
T Consensus 249 a~~~~~~---~~~~~gt~~y~aPE~~~~ 273 (429)
T 3kvw_A 249 SCYEHQR---VYTYIQSRFYRAPEVILG 273 (429)
T ss_dssp CEETTCC---CCSSCSCGGGCCHHHHHT
T ss_pred ceecCCc---ccccCCCCCccChHHHhC
Confidence 9865432 234679999999999754
No 290
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.92 E-value=9e-26 Score=246.84 Aligned_cols=174 Identities=25% Similarity=0.412 Sum_probs=144.0
Q ss_pred hhcccccccCeecccceeeEEEEEeC------CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCC
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 795 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 795 (902)
+..++|++.+.||+|+||.||+|++. +++.||+|++.... .....++.+|+.++++++||||+++++++...+
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 45689999999999999999999842 37789999987443 344567899999999999999999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEE
Q 046199 796 FKALVLEYMANGSLEKCLYSSN------RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAH 866 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~k 866 (902)
..|+||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999997654 34889999999999999999999 999999999999999984 44699
Q ss_pred EEeecCceecCCCcc--ceeccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEES--MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 867 L~DFG~a~~~~~~~~--~~~~~~gt~~y~APE~l~ 899 (902)
|+|||+++....... ......||+.|+|||++.
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 218 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhc
Confidence 999999976543322 122356789999999874
No 291
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.92 E-value=1.6e-25 Score=250.90 Aligned_cols=169 Identities=30% Similarity=0.423 Sum_probs=138.9
Q ss_pred hcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecC------Cee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG------NFK 797 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 797 (902)
...+|++.+.||+|+||.||+|++..+..||+|++.... ....+|+++++.++||||+++++++... ...
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 346799999999999999999999887789999886432 2234799999999999999999998543 348
Q ss_pred EEEEEccCCCChHHHH--hhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEEEeecCce
Q 046199 798 ALVLEYMANGSLEKCL--YSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD-DDMVAHLSDFGIAK 874 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~DFG~a~ 874 (902)
++||||++++.+.... ......+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 8999999875433322 123566899999999999999999999 99999999999999999 79999999999998
Q ss_pred ecCCCccceecccccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
....... .....||+.|+|||++..
T Consensus 191 ~~~~~~~-~~~~~~t~~y~aPE~~~~ 215 (394)
T 4e7w_A 191 ILIAGEP-NVSYICSRYYRAPELIFG 215 (394)
T ss_dssp ECCTTCC-CCSSCSCGGGCCHHHHTT
T ss_pred cccCCCC-CcccccCcCccCHHHHcC
Confidence 7654333 234678999999998743
No 292
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=242.49 Aligned_cols=169 Identities=28% Similarity=0.405 Sum_probs=138.9
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeee-----------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS----------- 792 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 792 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|++........+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 4789999999999999999999875 8999999998766666788999999999999999999998873
Q ss_pred ---cCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEEE
Q 046199 793 ---NGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD-DDMVAHLS 868 (902)
Q Consensus 793 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~ 868 (902)
+.+..|+||||++ |+|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4468899999997 599998853 45899999999999999999999 99999999999999997 56799999
Q ss_pred eecCceecCCCcc---ceeccccccccccccccc
Q 046199 869 DFGIAKLLNGEES---MRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 869 DFG~a~~~~~~~~---~~~~~~gt~~y~APE~l~ 899 (902)
|||.++....... ......+|+.|+|||++.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 197 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhc
Confidence 9999987643221 122346799999999874
No 293
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.92 E-value=2.7e-25 Score=251.27 Aligned_cols=167 Identities=31% Similarity=0.456 Sum_probs=138.1
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeec------CCee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN------GNFK 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 797 (902)
..+|++.+.||+|+||.||+|++.. ++.||||++.... ....+|+++++.++||||+++++++.. ..+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 4579999999999999999999864 8999999986542 233479999999999999999998843 2246
Q ss_pred EEEEEccCCCChHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-CcEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLY---SSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD-MVAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kL~DFG~a 873 (902)
++||||+++ ++.+.+. .....+++..+..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999976 6665553 34567999999999999999999999 9999999999999999965 57899999999
Q ss_pred eecCCCccceecccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+....... .....||+.|+|||++..
T Consensus 205 ~~~~~~~~-~~~~~~t~~y~aPE~~~~ 230 (420)
T 1j1b_A 205 KQLVRGEP-NVSYICSRYYRAPELIFG 230 (420)
T ss_dssp EECCTTCC-CCSCCSCTTSCCHHHHTT
T ss_pred hhcccCCC-ceeeeeCCCcCCHHHHcC
Confidence 87654332 234678999999998753
No 294
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.92 E-value=4.6e-25 Score=252.04 Aligned_cols=171 Identities=25% Similarity=0.378 Sum_probs=146.5
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCC-CCccceeeeeecCCeeEEEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH-RNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 801 (902)
..++|++.+.||+|+||.||+|++. +++.||||++..... .+.+.+|+++++.++| ++|+.+..++...+..++||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 3578999999999999999999975 489999998765432 3568899999999986 56666667778888999999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceecCC
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL---DDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~ 878 (902)
||+ +++|.+++......+++..+..++.||+.||+||| ++||+||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 89999999876778999999999999999999999 9999999999999999 6889999999999988765
Q ss_pred Cccc-------eecccccccccccccccc
Q 046199 879 EESM-------RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 879 ~~~~-------~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 187 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLG 187 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred CccccccccccccccCCCccccCHHHhcC
Confidence 4322 124679999999999764
No 295
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.92 E-value=6e-26 Score=252.78 Aligned_cols=169 Identities=12% Similarity=0.090 Sum_probs=127.4
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc---hhhhhHHHHHHHHHhC--CCCCcccee-------eee
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSV--RHRNLVKII-------SSC 791 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 791 (902)
..+|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 456999999999999999999986 589999999987542 3456777886555544 699988755 333
Q ss_pred ecC-----------------CeeEEEEEccCCCChHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHHccCCCCeE
Q 046199 792 SNG-----------------NFKALVLEYMANGSLEKCLYSSNRSLDIFQR------LSIMIDVALALEYLHFGYSNPVV 848 (902)
Q Consensus 792 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~qi~~~L~~LH~~~~~~iv 848 (902)
... ...|+||||++ |+|.+++...+...++..+ ..++.||+.||+||| ++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 322 34799999998 7999999764444455555 677899999999999 99999
Q ss_pred EcCCCCCCEEEcCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 849 HCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 849 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
||||||+||+++.++.+||+|||+|+..... .....+|+.|+|||++..
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~ 265 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNA 265 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccC
Confidence 9999999999999999999999999876432 224567799999999853
No 296
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.92 E-value=4.9e-26 Score=242.78 Aligned_cols=169 Identities=33% Similarity=0.460 Sum_probs=138.4
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecC-CeeEEE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG-NFKALV 800 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv 800 (902)
....++|++.+.||+|+||.||+|++ +++.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..|+|
T Consensus 17 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 17 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred cCChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 45568999999999999999999987 48899999987543 457889999999999999999999987544 578999
Q ss_pred EEccCCCChHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 801 LEYMANGSLEKCLYSSNR-SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
|||+++++|.+++..... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999999865432 3788999999999999999999 999999999999999999999999999999865432
Q ss_pred ccceeccccccccccccccc
Q 046199 880 ESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 880 ~~~~~~~~gt~~y~APE~l~ 899 (902)
. ....+++.|+|||++.
T Consensus 171 ~---~~~~~~~~y~aPE~~~ 187 (278)
T 1byg_A 171 Q---DTGKLPVKWTAPEALR 187 (278)
T ss_dssp --------CCTTTSCHHHHH
T ss_pred c---cCCCccccccCHHHhC
Confidence 2 2245788999999874
No 297
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92 E-value=6.3e-25 Score=241.76 Aligned_cols=177 Identities=27% Similarity=0.416 Sum_probs=149.3
Q ss_pred HHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHh--CCCCCccceeeeeecCC
Q 046199 718 YRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSNGN 795 (902)
Q Consensus 718 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~ 795 (902)
........++|++.+.||+|+||.||+|++ +++.||+|+++.. ..+.+.+|+++++. ++||||+++++++...+
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 333445568999999999999999999998 5899999998643 34667789998887 78999999999998775
Q ss_pred ----eeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcEE
Q 046199 796 ----FKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNILLDDDMVAH 866 (902)
Q Consensus 796 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~k 866 (902)
..|+||||+++|+|.+++... .+++..+..++.|++.||+|||.. ++.+|+||||||+||+++.++.+|
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred CccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 789999999999999999653 589999999999999999999921 147999999999999999999999
Q ss_pred EEeecCceecCCCccc----eecccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESM----RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~----~~~~~gt~~y~APE~l~~ 900 (902)
|+|||+++........ .....||+.|+|||++..
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 225 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTS
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcc
Confidence 9999999876554322 233579999999998753
No 298
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.92 E-value=4.2e-25 Score=244.30 Aligned_cols=170 Identities=25% Similarity=0.353 Sum_probs=143.7
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecC-----Ce
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----NF 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 796 (902)
..++|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|+++++.++||||+++++++..+ ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3578999999999999999999986 48899999996543 33456788999999999999999999987654 67
Q ss_pred eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 797 KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
.|+||||++ ++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999997 599998865 45899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccc----------eeccccccccccccccc
Q 046199 877 NGEESM----------RTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~----------~~~~~gt~~y~APE~l~ 899 (902)
...... .....||+.|+|||++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 195 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHH
T ss_pred ccccccccCccccccchhhccccccccCCeeec
Confidence 532211 11246899999999864
No 299
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=251.64 Aligned_cols=170 Identities=25% Similarity=0.328 Sum_probs=129.1
Q ss_pred cccccc-cCeecccceeeEEEEEeC---CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeee--cCCeeE
Q 046199 725 TDHFSE-KSLIGIGSFGTVYKGRFL---DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS--NGNFKA 798 (902)
Q Consensus 725 ~~~y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 798 (902)
.+.|++ .++||+|+||.||+|++. +++.||+|++.... ..+.+.+|+++++.++||||+++++++. .+...|
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 345766 558999999999999975 47889999986442 2357889999999999999999999994 477899
Q ss_pred EEEEccCCCChHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEE
Q 046199 799 LVLEYMANGSLEKCLYSS--------NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL----DDDMVAH 866 (902)
Q Consensus 799 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~~k 866 (902)
+||||+++ +|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||++ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 887776421 124899999999999999999999 9999999999999999 6778999
Q ss_pred EEeecCceecCCCcc---ceecccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEES---MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 867 L~DFG~a~~~~~~~~---~~~~~~gt~~y~APE~l~~ 900 (902)
|+|||+|+....... .....+||+.|+|||++..
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 209 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG 209 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTT
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcC
Confidence 999999987654321 2233679999999998864
No 300
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.92 E-value=2.1e-25 Score=265.13 Aligned_cols=177 Identities=27% Similarity=0.400 Sum_probs=147.7
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeCC----CcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeec
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSN 793 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 793 (902)
.+..+..++|++.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~- 461 (656)
T 2j0j_A 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 461 (656)
T ss_dssp GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence 3445567889999999999999999998743 4679999887543 334578899999999999999999999985
Q ss_pred CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 794 GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 794 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
++..|+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCC
Confidence 45689999999999999999877667999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCccce-eccccccccccccccc
Q 046199 874 KLLNGEESMR-TQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~-~~~~gt~~y~APE~l~ 899 (902)
+......... ....+|+.|||||++.
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~ 565 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESIN 565 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHH
T ss_pred eecCCCcceeccCCCCCcceeCHHHhc
Confidence 8765433222 2245778999999874
No 301
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=8.7e-26 Score=249.60 Aligned_cols=167 Identities=20% Similarity=0.241 Sum_probs=142.1
Q ss_pred cccccccCeecccceeeEEEEEeCC---------CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccc---------
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD---------GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK--------- 786 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 786 (902)
.++|++.+.||+|+||.||+|++.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4789999999999999999999864 788999998744 57889999999999999887
Q ss_pred ------eeeeeec-CCeeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 046199 787 ------IISSCSN-GNFKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNIL 858 (902)
Q Consensus 787 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (902)
+++++.. ++..|+||||+ +++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666655 78899999999 99999999765 356999999999999999999999 999999999999999
Q ss_pred EcCCC--cEEEEeecCceecCCCcc-------ceecccccccccccccccc
Q 046199 859 LDDDM--VAHLSDFGIAKLLNGEES-------MRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 859 l~~~~--~~kL~DFG~a~~~~~~~~-------~~~~~~gt~~y~APE~l~~ 900 (902)
++.++ .+||+|||+|+.+..... ......||+.|+|||++..
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence 99998 999999999987653321 1123479999999998754
No 302
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.92 E-value=2.6e-25 Score=250.17 Aligned_cols=169 Identities=27% Similarity=0.364 Sum_probs=142.3
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCC--------CCCccceeeeee--
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVR--------HRNLVKIISSCS-- 792 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~-- 792 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++.. ....+.+.+|+++++.++ ||||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 35789999999999999999998754 889999998744 334577889999999985 788999999987
Q ss_pred --cCCeeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCC-----
Q 046199 793 --NGNFKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDM----- 863 (902)
Q Consensus 793 --~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~----- 863 (902)
.....|+||||+. +++.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++.++
T Consensus 114 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhh
Confidence 5568999999994 5665655443 356999999999999999999999 88 999999999999999775
Q ss_pred --------------------------------------------cEEEEeecCceecCCCccceeccccccccccccccc
Q 046199 864 --------------------------------------------VAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 864 --------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.+||+|||.|+..... .....||+.|+|||++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhc
Confidence 7999999999876433 23357999999999875
Q ss_pred c
Q 046199 900 V 900 (902)
Q Consensus 900 ~ 900 (902)
.
T Consensus 267 ~ 267 (397)
T 1wak_A 267 G 267 (397)
T ss_dssp T
T ss_pred C
Confidence 4
No 303
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.92 E-value=5.3e-25 Score=240.64 Aligned_cols=172 Identities=30% Similarity=0.437 Sum_probs=145.0
Q ss_pred hcccccccCeecccceeeEEEEEeC--CCcEEEEEEeeeccc--hhhhhHHHHHHHHHhC---CCCCccceeeeee----
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQFD--GALKSFDAECEVLKSV---RHRNLVKIISSCS---- 792 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 792 (902)
..++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999984 488999999875432 2235677888887776 8999999999987
Q ss_pred -cCCeeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEee
Q 046199 793 -NGNFKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDF 870 (902)
Q Consensus 793 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DF 870 (902)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5678899999998 59999987643 34899999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCccceecccccccccccccccc
Q 046199 871 GIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 871 G~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
|.++...... ......||+.|+|||++..
T Consensus 165 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~ 193 (326)
T 1blx_A 165 GLARIYSFQM-ALTSVVVTLWYRAPEVLLQ 193 (326)
T ss_dssp CSCCCCCGGG-GGCCCCCCCTTCCHHHHTT
T ss_pred cccccccCCC-CccccccccceeCHHHHhc
Confidence 9998754322 2334678999999998753
No 304
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.92 E-value=3.7e-25 Score=246.25 Aligned_cols=166 Identities=26% Similarity=0.379 Sum_probs=140.3
Q ss_pred cccccccCeecccceeeEEEEEeCC-CcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCee----
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFK---- 797 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 797 (902)
.++|.+.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4789999999999999999999864 8999999997543 23457888999999999999999999999877654
Q ss_pred --EEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 798 --ALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 798 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
|+||||++ ++|.+++. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.|+.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58888763 34899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~ 215 (371)
T 4exu_A 194 ADAE---MTGYVVTRWYRAPEVILS 215 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSC
T ss_pred cccC---cCCcccCccccCHHHhcC
Confidence 5432 234678999999998754
No 305
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.92 E-value=5e-25 Score=236.17 Aligned_cols=172 Identities=25% Similarity=0.397 Sum_probs=148.5
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..|+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999986 58999999987543 2345788999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---CcEEEEeecCceec
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD---MVAHLSDFGIAKLL 876 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---~~~kL~DFG~a~~~ 876 (902)
||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.+ +.+||+|||.+...
T Consensus 99 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999888654 35899999999999999999999 9999999999999999764 47999999999876
Q ss_pred CCCccceeccccccccccccccc
Q 046199 877 NGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 877 ~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
..... .....||+.|+|||++.
T Consensus 175 ~~~~~-~~~~~~~~~y~aPE~~~ 196 (287)
T 2wei_A 175 QQNTK-MKDRIGTAYYIAPEVLR 196 (287)
T ss_dssp CCCSS-CSCHHHHHTTCCHHHHT
T ss_pred cCCCc-cccccCcccccChHHhc
Confidence 54332 23346899999999864
No 306
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.92 E-value=2.1e-25 Score=264.12 Aligned_cols=164 Identities=27% Similarity=0.427 Sum_probs=136.0
Q ss_pred CeecccceeeEEEEEeC---CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEEEEccCC
Q 046199 732 SLIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALVLEYMAN 806 (902)
Q Consensus 732 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (902)
+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 36789999997543 2345789999999999999999999999975 457899999999
Q ss_pred CChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccc---e
Q 046199 807 GSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESM---R 883 (902)
Q Consensus 807 g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~---~ 883 (902)
|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+.+...... .
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999654 46899999999999999999999 999999999999999999999999999999876543321 2
Q ss_pred ecccccccccccccccc
Q 046199 884 TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 884 ~~~~gt~~y~APE~l~~ 900 (902)
....+|+.|+|||++..
T Consensus 530 ~~~~~t~~y~APE~~~~ 546 (635)
T 4fl3_A 530 THGKWPVKWYAPECINY 546 (635)
T ss_dssp -----CGGGSCHHHHHH
T ss_pred cCCCCceeeeChhhhcC
Confidence 22457789999998753
No 307
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=7.6e-26 Score=246.52 Aligned_cols=179 Identities=24% Similarity=0.418 Sum_probs=148.8
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeec
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN 793 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 793 (902)
....++.+..++|++.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 100 (319)
T 2y4i_B 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100 (319)
T ss_dssp CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred cccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 4455667788999999999999999999998754 59999987543 2334677889999999999999999999999
Q ss_pred CCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 046199 794 GNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIA 873 (902)
Q Consensus 794 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 873 (902)
.+..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++ ++.+||+|||++
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCc
Confidence 99999999999999999999776667999999999999999999999 99999999999999998 679999999998
Q ss_pred eecCCCc-----cceecccccccccccccccc
Q 046199 874 KLLNGEE-----SMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 874 ~~~~~~~-----~~~~~~~gt~~y~APE~l~~ 900 (902)
+...... .......||+.|+|||++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 208 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSC
T ss_pred cccccccccccccccccCCCcccccChHHhhh
Confidence 7643211 11223468999999998853
No 308
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.92 E-value=8.8e-25 Score=240.11 Aligned_cols=169 Identities=21% Similarity=0.320 Sum_probs=145.3
Q ss_pred hcccccccCeecccceeeEEEEEeC--CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCC------CccceeeeeecCC
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR------NLVKIISSCSNGN 795 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~ 795 (902)
..++|++.+.||+|+||.||+|.+. +++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++...+
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 4578999999999999999999873 4889999998744 33457788999999988765 4999999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-------------
Q 046199 796 FKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD------------- 861 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~------------- 861 (902)
..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 889999987654 35889999999999999999999 999999999999999987
Q ss_pred ------CCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 862 ------DMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 862 ------~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
++.+||+|||.++..... .....||+.|+|||++..
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~ 208 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILA 208 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTT
T ss_pred ccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhC
Confidence 668999999999875432 234579999999998754
No 309
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=253.32 Aligned_cols=171 Identities=26% Similarity=0.430 Sum_probs=139.3
Q ss_pred HhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEE
Q 046199 722 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 722 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 800 (902)
.+...+|.+.+.||+|+||.||.....+++.||||++.... ...+.+|+++++.+ +||||+++++++.+.+..|+|
T Consensus 20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 45566899999999999999766555679999999986432 24467899999999 799999999999999999999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-----CCcEEEEeecCcee
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD-----DMVAHLSDFGIAKL 875 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-----~~~~kL~DFG~a~~ 875 (902)
|||++ |+|.+++........+..+..++.||+.||+||| ++||+||||||+||+++. ...+||+|||+|+.
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 5999999776655666677899999999999999 999999999999999953 23688999999987
Q ss_pred cCCCc---cceeccccccccccccccc
Q 046199 876 LNGEE---SMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~---~~~~~~~gt~~y~APE~l~ 899 (902)
..... .......||+.|+|||++.
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~ 199 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLS 199 (432)
T ss_dssp C------------CCSCTTSCCGGGTS
T ss_pred ccCCCcceeeccccCCCcCccChhhhh
Confidence 65432 1223467999999999985
No 310
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.1e-25 Score=266.52 Aligned_cols=165 Identities=27% Similarity=0.371 Sum_probs=141.8
Q ss_pred hcccccccCeecccceeeEEEEEeC--CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeecCCe----
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF---- 796 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 796 (902)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3478999999999999999999985 58999999986543 3445678899999999999999999999987654
Q ss_pred -eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 797 -KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 797 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
.|+||||++|++|.+++.. .+++..+..++.||+.||+||| ++||+||||||+||+++.+ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999987743 6899999999999999999999 9999999999999999986 999999999988
Q ss_pred cCCCccceeccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
.... ....||+.|||||++.
T Consensus 231 ~~~~----~~~~gt~~y~aPE~~~ 250 (681)
T 2pzi_A 231 INSF----GYLYGTPGFQAPEIVR 250 (681)
T ss_dssp TTCC----SCCCCCTTTSCTTHHH
T ss_pred cccC----CccCCCccccCHHHHc
Confidence 6543 3357999999999874
No 311
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.92 E-value=1e-24 Score=241.97 Aligned_cols=176 Identities=28% Similarity=0.344 Sum_probs=134.2
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeecCC---
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--- 795 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 795 (902)
......++|++.+.||+|+||.||+|++. +++.||||++.... .......+|++.++.++||||+++++++...+
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34566789999999999999999999985 48999999986542 33456677888889999999999999986533
Q ss_pred ----eeEEEEEccCCCChHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-CCcEEE
Q 046199 796 ----FKALVLEYMANGSLEKCLY---SSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD-DMVAHL 867 (902)
Q Consensus 796 ----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kL 867 (902)
..++||||+++ ++.+.+. .....+++..+..++.|++.|++||| .+++||+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 37899999987 5544433 24556889999999999999999999 45789999999999999997 899999
Q ss_pred EeecCceecCCCccceeccccccccccccccc
Q 046199 868 SDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 868 ~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+|||+|+....... .....||+.|+|||++.
T Consensus 174 ~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~ 204 (360)
T 3e3p_A 174 CDFGSAKKLSPSEP-NVAYICSRYYRAPELIF 204 (360)
T ss_dssp CCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHT
T ss_pred eeCCCceecCCCCC-cccccCCcceeCHHHHc
Confidence 99999987654432 33457899999999874
No 312
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.91 E-value=5e-25 Score=240.00 Aligned_cols=175 Identities=27% Similarity=0.292 Sum_probs=148.2
Q ss_pred HHHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc------hhhhhHHHHHHHHHhCC--CCCccceee
Q 046199 719 RELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD------GALKSFDAECEVLKSVR--HRNLVKIIS 789 (902)
Q Consensus 719 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~ 789 (902)
.+.....++|++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+.++++++ ||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344556789999999999999999999875 488999999975432 12356778999999996 599999999
Q ss_pred eeecCCeeEEEEEccCC-CChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEE
Q 046199 790 SCSNGNFKALVLEYMAN-GSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD-DDMVAHL 867 (902)
Q Consensus 790 ~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL 867 (902)
++..++..++||||+.+ ++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++ +++.+||
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999999986 8999998654 45899999999999999999999 99999999999999999 7889999
Q ss_pred EeecCceecCCCccceeccccccccccccccc
Q 046199 868 SDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 868 ~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+|||+++...... .....||+.|+|||++.
T Consensus 192 ~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~ 221 (320)
T 3a99_A 192 IDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 221 (320)
T ss_dssp CCCTTCEECCSSC--BCCCCSCGGGSCHHHHH
T ss_pred eeCcccccccccc--ccCCCCCccCCChHHhc
Confidence 9999998765432 23456999999999874
No 313
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.91 E-value=2.9e-25 Score=241.25 Aligned_cols=179 Identities=24% Similarity=0.377 Sum_probs=146.3
Q ss_pred cCHHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeecc--chhhhhHHHHHHHHHhCC--CCCccceeeee
Q 046199 716 FSYRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR--HRNLVKIISSC 791 (902)
Q Consensus 716 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 791 (902)
+.+..+....++|++.+.||+|+||.||+|++.+++.||+|++.... ....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 33344456678899999999999999999999889999999997543 334578899999999997 59999999999
Q ss_pred ecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 792 SNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 792 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
..++..|+||| +.+++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||++++ +.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999999 5578999999764 46899999999999999999999 999999999999999975 799999999
Q ss_pred CceecCCCccc--eecccccccccccccccc
Q 046199 872 IAKLLNGEESM--RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 872 ~a~~~~~~~~~--~~~~~gt~~y~APE~l~~ 900 (902)
+++........ .....||+.|+|||++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTT
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhh
Confidence 99876543321 223568999999999754
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=4.4e-24 Score=227.33 Aligned_cols=207 Identities=27% Similarity=0.318 Sum_probs=154.1
Q ss_pred CCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeec
Q 046199 369 SSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGL 448 (902)
Q Consensus 369 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 448 (902)
++++|++++|.+.+..+..+..++ +|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFP-ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCT-TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhcccc-CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 344455555555444445566666 7777788878777777777888888888888888888777777777777777776
Q ss_pred ccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCc-ccccccCCCCceEEEcCCCccCCCCc
Q 046199 449 ENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSF-IPSTFWNLNNILSFDFSSNSLNGSLP 527 (902)
Q Consensus 449 ~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~~~ 527 (902)
++|++. +..+..+.++++|++|++++|++++. +|..|..+++|++|++++|++++..+
T Consensus 108 ~~n~l~---------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 108 VETNLA---------------------SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp TTSCCC---------------------CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCcc---------------------ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 666665 23333466777777777777777764 47777777888888888888877666
Q ss_pred cccccccccc----eeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccC
Q 046199 528 LDIGNMKVVV----EINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVI 598 (902)
Q Consensus 528 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 598 (902)
..+..+..|+ +|++++|++++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 7777777666 7889999998665555544 48999999999999877777899999999999999998654
No 315
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.91 E-value=3.1e-25 Score=240.82 Aligned_cols=174 Identities=30% Similarity=0.336 Sum_probs=139.2
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc------hhhhhHHHHHHHHHhC----CCCCcccee
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD------GALKSFDAECEVLKSV----RHRNLVKII 788 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~ 788 (902)
+.....++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34556788999999999999999999875 488999999865432 2234566799999998 899999999
Q ss_pred eeeecCCeeEEEEEc-cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEE
Q 046199 789 SSCSNGNFKALVLEY-MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD-DDMVAH 866 (902)
Q Consensus 789 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~k 866 (902)
+++...+..++|||| +++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 7899999998764 45899999999999999999999 99999999999999999 889999
Q ss_pred EEeecCceecCCCccceeccccccccccccccc
Q 046199 867 LSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 867 L~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
|+|||+++...... .....||+.|+|||++.
T Consensus 181 l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~ 211 (312)
T 2iwi_A 181 LIDFGSGALLHDEP--YTDFDGTRVYSPPEWIS 211 (312)
T ss_dssp ECCCSSCEECCSSC--BCCCCSCTTTSCHHHHH
T ss_pred EEEcchhhhcccCc--ccccCCcccccCceeee
Confidence 99999998765432 23456999999999874
No 316
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.4e-24 Score=229.30 Aligned_cols=137 Identities=26% Similarity=0.199 Sum_probs=84.3
Q ss_pred CCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceE
Q 046199 484 NLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLL 563 (902)
Q Consensus 484 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 563 (902)
.+++|+.|++++|+++. +|..+..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 34444555555555443 34444555555555555555554444555555566666666666665555556667777777
Q ss_pred EccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecC
Q 046199 564 SLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEI 622 (902)
Q Consensus 564 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 622 (902)
+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.++|++|+|.|.+
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 77777777555556667777777777777777 56666666677777777777777654
No 317
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.1e-24 Score=231.42 Aligned_cols=180 Identities=22% Similarity=0.226 Sum_probs=105.3
Q ss_pred CccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCcccccc
Q 046199 149 TKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLW 228 (902)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~ 228 (902)
.++..+++..+.+.+. ..+..+++|+.|++++|.++ .++ .++.+++|++|+|++|.++.+
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~---------------- 78 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI---------------- 78 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC----------------
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc----------------
Confidence 3455566666665532 33456666677777766665 333 366666667777666665421
Q ss_pred ccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCC
Q 046199 229 QCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIP 308 (902)
Q Consensus 229 ~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 308 (902)
..++.+++|++|+|++|++++..+..+..+++|++|+|++|++++..+.. +..+++|++|++++|++++..+
T Consensus 79 -----~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~ 150 (272)
T 3rfs_A 79 -----SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGV---FDKLTNLTYLNLAHNQLQSLPK 150 (272)
T ss_dssp -----GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT---TTTCTTCCEEECCSSCCCCCCT
T ss_pred -----hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHH---hccCCCCCEEECCCCccCccCH
Confidence 34556666666666666666555555666666666666666666443333 4555666666666666665555
Q ss_pred ccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCC
Q 046199 309 GFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTP 356 (902)
Q Consensus 309 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 356 (902)
..+..+++|++|++++|++++..+..+..+++|++|++++|++++..+
T Consensus 151 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 151 GVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred HHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 555556666666666666655555555555555555555555554433
No 318
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.91 E-value=6.3e-25 Score=242.81 Aligned_cols=166 Identities=26% Similarity=0.377 Sum_probs=139.9
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeeeecCCe-----
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF----- 796 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 796 (902)
.++|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 478999999999999999999986 48999999997543 2335678899999999999999999999977654
Q ss_pred -eEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 797 -KALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 797 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
.|+||||++ ++|.+++. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 58887763 34899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccceecccccccccccccccc
Q 046199 876 LNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 876 ~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.... .....||+.|+|||++..
T Consensus 176 ~~~~---~~~~~~t~~y~aPE~~~~ 197 (353)
T 3coi_A 176 ADAE---MTGYVVTRWYRAPEVILS 197 (353)
T ss_dssp -----------CCSBCCSCHHHHSC
T ss_pred CCCC---ccccccCcCcCCHHHHhC
Confidence 5432 234578999999998754
No 319
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.91 E-value=1.2e-24 Score=238.03 Aligned_cols=171 Identities=27% Similarity=0.336 Sum_probs=128.6
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc-hhhhhHHHHHH-HHHhCCCCCccceeeeeecCCeeEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECE-VLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
...++|++.+.||+|+||.||+|.+. +++.||||+++.... .....+..|+. +++.++||||+++++++..++..++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 45689999999999999999999985 589999999976532 33445556665 6777899999999999999999999
Q ss_pred EEEccCCCChHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 800 VLEYMANGSLEKCLYS----SNRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
||||+++ +|.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||+++
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 9999986 88777653 2456899999999999999999999 88 99999999999999999999999999998
Q ss_pred ecCCCccceecccccccccccccc
Q 046199 875 LLNGEESMRTQTLGTIGYMAPGLW 898 (902)
Q Consensus 875 ~~~~~~~~~~~~~gt~~y~APE~l 898 (902)
....... .....||+.|+|||++
T Consensus 175 ~~~~~~~-~~~~~gt~~y~aPE~~ 197 (327)
T 3aln_A 175 QLVDSIA-KTRDAGCRPYMAPERI 197 (327)
T ss_dssp C-----------------------
T ss_pred ecccccc-cccCCCCccccCceee
Confidence 7654322 2334699999999997
No 320
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.91 E-value=1.3e-24 Score=242.77 Aligned_cols=175 Identities=27% Similarity=0.320 Sum_probs=146.1
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CC-----Cccceeeeee
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HR-----NLVKIISSCS 792 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~ 792 (902)
......++|++.+.||+|+||.||+|++.. ++.||||+++.. ....+.+..|+++++.++ |+ +|+++++++.
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 334456899999999999999999999864 889999999743 234567788999988885 44 4999999999
Q ss_pred cCCeeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc--CCCcEEEEe
Q 046199 793 NGNFKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLD--DDMVAHLSD 869 (902)
Q Consensus 793 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~--~~~~~kL~D 869 (902)
..+..|+||||+++ +|.+++.... ..+++..+..++.|++.||+||| .++.||+||||||+||+++ .++.+||+|
T Consensus 127 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 127 FRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT-STTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred cCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc-cCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999999965 9999987654 45899999999999999999999 2347999999999999994 477899999
Q ss_pred ecCceecCCCccceecccccccccccccccc
Q 046199 870 FGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 870 FG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
||+|+..... .....||+.|+|||++..
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~ 232 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLG 232 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTT
T ss_pred ccCceecccc---cccccCCccccChHHHcC
Confidence 9999886433 234679999999999864
No 321
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.5e-24 Score=230.20 Aligned_cols=202 Identities=24% Similarity=0.263 Sum_probs=155.2
Q ss_pred CCCCCcEEEeecceecccCCcccccccccCeeecccccccCCC-CCcCCCCCeEeccCccccCCCCccccCCCcCceEec
Q 046199 415 NLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPI-PDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSL 493 (902)
Q Consensus 415 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 493 (902)
.+++|+.|++++|.++. + ..+..+++|++|++++|++++.- ...+.+|++|++++|++++..+..|.++++|++|++
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 33444444444444441 1 12444444444444444444311 012335666666666666777777888999999999
Q ss_pred CCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCC
Q 046199 494 GSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGP 573 (902)
Q Consensus 494 ~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 573 (902)
++|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..|+.+++|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 99999988888889999999999999999987777788999999999999999988888889999999999999999988
Q ss_pred ccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCC
Q 046199 574 IPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSG 625 (902)
Q Consensus 574 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 625 (902)
.|..|+.+++|+.|+|++|++.+. +++|+.+++++|.++|.+|..
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 888899999999999999998865 447899999999999999973
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.7e-24 Score=227.55 Aligned_cols=206 Identities=28% Similarity=0.279 Sum_probs=176.0
Q ss_pred cccccccCeeecccccccCCCCCcCC-CCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEE
Q 046199 437 VGRLNTLQGLGLENNKLEGPIPDDLC-QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSF 515 (902)
Q Consensus 437 ~~~l~~L~~L~L~~N~l~~~~p~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 515 (902)
+..+++++++++++|.++ .+|..+. +++.|++++|++++..|..|.++++|+.|+|++|+|+++.+. ..+++|++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L 82 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTL 82 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEE
T ss_pred ccccCCccEEECCCCCCC-cCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEE
Confidence 445566666666666666 4454443 788888888988888888999999999999999999986443 789999999
Q ss_pred EcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc
Q 046199 516 DFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS 595 (902)
Q Consensus 516 ~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 595 (902)
++++|+++ .+|..+..+++|++|++++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+
T Consensus 83 ~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 99999999 57888999999999999999999888899999999999999999999888888999999999999999999
Q ss_pred ccCCcccccccccccccccCCcceecCCC-CCcccccccccccCCcccCCCCC
Q 046199 596 GVIPISLEKLVYLKDLNLSFNRLEGEIPS-GGSFANFSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 596 ~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~lc~~~~ 647 (902)
+..+..+..+++|+.|+|++|+++ .+|. ......+....+.+||+.|.+..
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 776677899999999999999999 4554 34455677788999999988643
No 323
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.91 E-value=2.4e-24 Score=236.21 Aligned_cols=167 Identities=25% Similarity=0.353 Sum_probs=121.9
Q ss_pred hcccccccC-eecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeeeeec----CCee
Q 046199 724 ATDHFSEKS-LIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNFK 797 (902)
Q Consensus 724 ~~~~y~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 797 (902)
..++|.+.+ .||+|+||.||+|++. +++.||+|++.... .........++.++||||+++++++.. +...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 457898854 6999999999999987 48999999986531 112222334567799999999999875 4568
Q ss_pred EEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a 873 (902)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999997654 46899999999999999999999 999999999999999976 456999999999
Q ss_pred eecCCCccceeccccccccccccccc
Q 046199 874 KLLNGEESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 874 ~~~~~~~~~~~~~~gt~~y~APE~l~ 899 (902)
+...... .....||+.|+|||++.
T Consensus 179 ~~~~~~~--~~~~~~t~~y~aPE~~~ 202 (336)
T 3fhr_A 179 KETTQNA--LQTPCYTPYYVAPEVLG 202 (336)
T ss_dssp EEC-----------------------
T ss_pred eeccccc--cccCCCCcCccChhhhC
Confidence 8764322 23457899999999874
No 324
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.91 E-value=2.4e-24 Score=238.39 Aligned_cols=169 Identities=22% Similarity=0.327 Sum_probs=143.1
Q ss_pred hcccccccCeecccceeeEEEEEeCC-C-cEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC------ccceeeeeecCC
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-G-MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN------LVKIISSCSNGN 795 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 795 (902)
..++|++.+.||+|+||.||+|++.. + +.||+|+++.. ....+.+.+|+++++.++|++ ++.+++++...+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 45799999999999999999999854 4 68999998743 334577889999999997665 899999999999
Q ss_pred eeEEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---------------
Q 046199 796 FKALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL--------------- 859 (902)
Q Consensus 796 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll--------------- 859 (902)
..++||||+ ++++.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 556766665543 56899999999999999999999 9999999999999999
Q ss_pred ----cCCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 860 ----DDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 860 ----~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
+.++.+||+|||+++..... .....||+.|+|||++..
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~ 213 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILE 213 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTT
T ss_pred cccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeec
Confidence 56789999999999875432 234579999999998753
No 325
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=3.1e-26 Score=251.56 Aligned_cols=269 Identities=18% Similarity=0.237 Sum_probs=172.2
Q ss_pred CCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCC--CCCCeeeccccccccCCCccccCCCcceEEEecCccccC
Q 046199 29 TSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNL--SSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSG 106 (902)
Q Consensus 29 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~ 106 (902)
.-|.+|.++.|+.. .++.+|++++.+. +..++.+ +.++.|++++|.+++..|. ++.+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34668999988643 4788999998876 4556666 8899999999999866554 6789999999999999876
Q ss_pred C-CCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeeccc-ccCCC-CchhhccccccceeecccC
Q 046199 107 S-FPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYN-KLQGE-IPQELGNLAELEWLSLPRS 183 (902)
Q Consensus 107 ~-~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~n 183 (902)
. +|. .++++++|++|++++|.+++. +|..++.+++|++|+|++| .+++. +|..+..+++|++|++++|
T Consensus 108 ~~~~~-~~~~~~~L~~L~L~~~~l~~~--------~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 108 STLHG-ILSQCSKLQNLSLEGLRLSDP--------IVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp HHHHH-HHTTBCCCSEEECTTCBCCHH--------HHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred HHHHH-HHhhCCCCCEEeCcCcccCHH--------HHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 5 333 346677777777777776543 4556666777777777777 56542 5666677777777777777
Q ss_pred -cCCCC-CChhhhccC-cccEEeeeeCCCCcccccccccc-CCccccccccCCCccccCCCCCCEEEccCcc-ccCcCCC
Q 046199 184 -FLTGT-IPSSIFNLS-SLLELDFSNNSLTGFYMTNNHFT-GSIPRNLWQCEIPHEIGNLPNLEVLGIDENH-LVGDVPN 258 (902)
Q Consensus 184 -~l~~~-~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~-g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~-l~~~~p~ 258 (902)
.+++. ++..+..++ +|++|+|++|.+. ++ +. +|..+..+++|+.|+|++|. +++..+.
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~--------~~~~~---------l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 241 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRKN--------LQKSD---------LSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGGG--------SCHHH---------HHHHHHHCTTCSEEECTTCTTCCGGGGG
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCccc--------CCHHH---------HHHHHhhCCCCCEEeCCCCCcCCHHHHH
Confidence 77643 566667777 7777777777321 11 11 23455666777777777777 5555666
Q ss_pred cccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcccccc-ccccEEEccCCcccCcccccc
Q 046199 259 TIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNA-SKLFLLELTGNSFSGFIPDTL 335 (902)
Q Consensus 259 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~l 335 (902)
.+..+++|+.|++++|. +..+..+..+..+++|++|++++| ++ ...+..+ ..+..|+++.|++++..|..+
T Consensus 242 ~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 242 EFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred HHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 66667777777777764 222333333455555666666555 22 1122222 124444455555554444433
No 326
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=235.42 Aligned_cols=172 Identities=26% Similarity=0.327 Sum_probs=130.5
Q ss_pred hhcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccch--hhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 723 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG--ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 723 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
...++|++.+.||+|+||.||+|++. +++.||||+++..... ..+.+..+..+++.++||||+++++++..++..|+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 34578999999999999999999986 5899999999765332 22344455567888899999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceecCC
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNG 878 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 878 (902)
||||+ ++.+..+.......+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99999 55666666555567899999999999999999999 75 999999999999999999999999999977654
Q ss_pred Cccceeccccccccccccccc
Q 046199 879 EESMRTQTLGTIGYMAPGLWV 899 (902)
Q Consensus 879 ~~~~~~~~~gt~~y~APE~l~ 899 (902)
... .....||+.|+|||++.
T Consensus 178 ~~~-~~~~~~~~~y~aPE~~~ 197 (318)
T 2dyl_A 178 DKA-KDRSAGCAAYMAPERID 197 (318)
T ss_dssp ----------CCTTCCHHHHC
T ss_pred Ccc-ccccCCCccccChhhcc
Confidence 322 23356999999999974
No 327
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.91 E-value=1.8e-24 Score=245.58 Aligned_cols=168 Identities=28% Similarity=0.390 Sum_probs=132.1
Q ss_pred ccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhC-CCCCccceeeeeecCCeeEEEEEcc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFKALVLEYM 804 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 804 (902)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++.+ +||||+++++++.+++..|+||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 456667899999999998776678999999998654 235678899999876 8999999999999999999999999
Q ss_pred CCCChHHHHhhCCCC------CCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-------------CcE
Q 046199 805 ANGSLEKCLYSSNRS------LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDD-------------MVA 865 (902)
Q Consensus 805 ~~g~L~~~l~~~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-------------~~~ 865 (902)
+ |+|.+++...... .++..+..++.||+.||+||| ++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 5999999654321 122345789999999999999 9999999999999999754 489
Q ss_pred EEEeecCceecCCCccc----eecccccccccccccccc
Q 046199 866 HLSDFGIAKLLNGEESM----RTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 866 kL~DFG~a~~~~~~~~~----~~~~~gt~~y~APE~l~~ 900 (902)
||+|||+|+........ .....||+.|+|||++..
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence 99999999987654321 223579999999999853
No 328
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.91 E-value=7.8e-25 Score=255.17 Aligned_cols=172 Identities=30% Similarity=0.441 Sum_probs=145.3
Q ss_pred cccccccCeecccceeeEEEEEeC-CCcEEEEEEeeecc-chhhhhHHHHHHHHHhCCCCCccceeeeeec------CCe
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSN------GNF 796 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 796 (902)
.++|++.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++.++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 378999999999999999999885 48999999987543 3446788999999999999999999998765 677
Q ss_pred eEEEEEccCCCChHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeec
Q 046199 797 KALVLEYMANGSLEKCLYSSNR--SLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMV---AHLSDFG 871 (902)
Q Consensus 797 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---~kL~DFG 871 (902)
.|+||||++||+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999976432 5888999999999999999999 999999999999999997764 9999999
Q ss_pred CceecCCCccceecccccccccccccccc
Q 046199 872 IAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 872 ~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
.+........ .....||+.|+|||++..
T Consensus 170 ~a~~~~~~~~-~~~~~gt~~Y~APE~l~~ 197 (676)
T 3qa8_A 170 YAKELDQGEL-CTEFVGTLQYLAPELLEQ 197 (676)
T ss_dssp CCCBTTSCCC-CCCCCSCCTTCSSCSSCC
T ss_pred cccccccccc-cccccCCcccCChHHhcc
Confidence 9987654432 334679999999998753
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=9.8e-24 Score=221.12 Aligned_cols=192 Identities=22% Similarity=0.281 Sum_probs=130.5
Q ss_pred CCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCC
Q 046199 29 TSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSF 108 (902)
Q Consensus 29 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 108 (902)
.+||.|.|++|... .+.+++++++++ .+|+.+. ++|++|+|++|++++..|..++.+++|++|+|++|.+++.
T Consensus 2 ~~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~- 74 (251)
T 3m19_A 2 KTCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL- 74 (251)
T ss_dssp --CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC-
T ss_pred ccCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc-
Confidence 36999999999643 345788888887 6676655 5788888888888866666777888888888888877753
Q ss_pred CcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCC
Q 046199 109 PSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGT 188 (902)
Q Consensus 109 ~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 188 (902)
.|..+..+++|++|+|++|++++..|..++.+++|++|+|++|++++.
T Consensus 75 --------------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 122 (251)
T 3m19_A 75 --------------------------------SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSL 122 (251)
T ss_dssp --------------------------------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred --------------------------------CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCc
Confidence 334455666777777777777755555666777777777777777755
Q ss_pred CChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCce
Q 046199 189 IPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKA 268 (902)
Q Consensus 189 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (902)
.+..|.++++|++|+|++|+|+.+ | |..|+.+++|++|+|++|++++..+..+..+++|+.
T Consensus 123 ~~~~~~~l~~L~~L~Ls~N~l~~~-----------~--------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 183 (251)
T 3m19_A 123 PSGVFDRLTKLKELRLNTNQLQSI-----------P--------AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT 183 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCC-----------C--------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ChhHhccCCcccEEECcCCcCCcc-----------C--------HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 555566677777777777765421 1 234666667777777777776555556666667777
Q ss_pred EeccCccccc
Q 046199 269 LSLLNNTLSG 278 (902)
Q Consensus 269 L~Ls~N~l~~ 278 (902)
|+|++|.+++
T Consensus 184 L~l~~N~~~c 193 (251)
T 3m19_A 184 ITLFGNQFDC 193 (251)
T ss_dssp EECCSCCBCT
T ss_pred EEeeCCceeC
Confidence 7777776653
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.4e-23 Score=218.12 Aligned_cols=182 Identities=22% Similarity=0.280 Sum_probs=160.1
Q ss_pred ccCeeecccccccCCCCCcCC-CCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCC
Q 046199 442 TLQGLGLENNKLEGPIPDDLC-QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSN 520 (902)
Q Consensus 442 ~L~~L~L~~N~l~~~~p~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 520 (902)
..++++++++.++ .+|..+. +++.|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CCeEEecCCCCcc-ccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 4556666666666 4555444 7888888888888888888999999999999999999988888999999999999999
Q ss_pred ccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCc
Q 046199 521 SLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPI 600 (902)
Q Consensus 521 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 600 (902)
++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|+.+++|+.|+|++|++++..|.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 99988888889999999999999999987777889999999999999999987777899999999999999999988888
Q ss_pred ccccccccccccccCCcceecCCC
Q 046199 601 SLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 601 ~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
.+..+++|+.|++++|+|+|..+.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHhCCCCCCEEEeeCCceeCCccc
Confidence 899999999999999999987554
No 331
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.90 E-value=3.1e-24 Score=239.30 Aligned_cols=169 Identities=21% Similarity=0.380 Sum_probs=143.0
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-----------CCCccceeeee
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-----------HRNLVKIISSC 791 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 791 (902)
..++|++.+.||+|+||.||+|++. +++.||||+++.. ....+.+.+|+.++++++ ||||+++++++
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 3578999999999999999999985 5889999998743 234567889999998886 89999999998
Q ss_pred ecCC----eeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEc-----
Q 046199 792 SNGN----FKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNILLD----- 860 (902)
Q Consensus 792 ~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~-~ivHrDlkp~NIll~----- 860 (902)
...+ ..++||||+ +++|.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCC
Confidence 7654 789999999 88999998764 345899999999999999999999 87 999999999999994
Q ss_pred -CCCcEEEEeecCceecCCCccceecccccccccccccccc
Q 046199 861 -DDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 861 -~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l~~ 900 (902)
..+.+||+|||+|+..... .....||+.|+|||++..
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~ 209 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLG 209 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHT
T ss_pred cCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhC
Confidence 4458999999999876432 233579999999998753
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=228.05 Aligned_cols=207 Identities=18% Similarity=0.192 Sum_probs=110.1
Q ss_pred CcccEEEcccCcccCcCCcchhccCcccc--cCcCccceeeecccccCCCCc----hhhccccccceeecccCcCCCCCC
Q 046199 117 SSLRAIDCNYNSLSGELPANIFRAIPKDI--GNLTKLKELYLGYNKLQGEIP----QELGNLAELEWLSLPRSFLTGTIP 190 (902)
Q Consensus 117 ~~L~~ldls~n~l~~~~~~~~~~~ip~~~--~~l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~n~l~~~~p 190 (902)
++|++|++++|.+++. +|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|
T Consensus 91 ~~L~~L~l~~n~l~~~--------~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 162 (310)
T 4glp_A 91 SRLKELTLEDLKITGT--------MPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSC 162 (310)
T ss_dssp SCCCEEEEESCCCBSC--------CCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCT
T ss_pred CceeEEEeeCCEeccc--------hhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhH
Confidence 3355555555555433 33343 555666666666666665444 233456666666666666665555
Q ss_pred hhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCC----cccCCCCC
Q 046199 191 SSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPN----TIFNMSTL 266 (902)
Q Consensus 191 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L 266 (902)
..|+++++|++|+|++|++... ..++ .+..++.+++|++|+|++|+++ .+|. .+..+++|
T Consensus 163 ~~~~~l~~L~~L~Ls~N~l~~~--------~~~~-------~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L 226 (310)
T 4glp_A 163 EQVRAFPALTSLDLSDNPGLGE--------RGLM-------AALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQP 226 (310)
T ss_dssp TSCCCCTTCCEEECCSCTTCHH--------HHHH-------TTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCC
T ss_pred HHhccCCCCCEEECCCCCCccc--------hhhh-------HHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCC
Confidence 5666666666666666654310 0000 0122345566666666666665 2222 13455666
Q ss_pred ceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEec
Q 046199 267 KALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGL 346 (902)
Q Consensus 267 ~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 346 (902)
++|+|++|++++..|..+..+..+++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|++
T Consensus 227 ~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L 301 (310)
T 4glp_A 227 HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTL 301 (310)
T ss_dssp SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEEC
T ss_pred CEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEEC
Confidence 66666666666555555433333456666666666665 3344332 4566666666666543 22 445556666666
Q ss_pred ccccCC
Q 046199 347 GYNYLT 352 (902)
Q Consensus 347 s~N~l~ 352 (902)
++|+++
T Consensus 302 ~~N~l~ 307 (310)
T 4glp_A 302 DGNPFL 307 (310)
T ss_dssp SSTTTS
T ss_pred cCCCCC
Confidence 666554
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=3.5e-24 Score=248.50 Aligned_cols=157 Identities=20% Similarity=0.233 Sum_probs=123.3
Q ss_pred cccCeecccceeeEEEEEeCCCcEEEEEEeeeccc--------hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEEE
Q 046199 729 SEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--------GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 729 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 800 (902)
...+.||+|+||.||+|+. .++.+++|+...... ...+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567899999999999954 578899998643221 1235689999999999999999666666667778999
Q ss_pred EEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecCCCc
Q 046199 801 LEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEE 880 (902)
Q Consensus 801 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 880 (902)
|||++|++|.+++.. +..++.|++.||+||| +++|+||||||+||+++. .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999854 5689999999999999 999999999999999998 99999999999876543
Q ss_pred cce-------ecccccccccccccccc
Q 046199 881 SMR-------TQTLGTIGYMAPGLWVV 900 (902)
Q Consensus 881 ~~~-------~~~~gt~~y~APE~l~~ 900 (902)
... ....||+.|||||++..
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 221 24679999999999864
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.4e-25 Score=244.76 Aligned_cols=181 Identities=18% Similarity=0.186 Sum_probs=87.9
Q ss_pred EEeccCCcceecCcccCCCCCCCeeeccccccccCCC----ccccCCC-cceEEEecCccccCCCCcccccCCCcccEEE
Q 046199 49 LNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIP----SSIFSIS-TLKILILGDNQLSGSFPSFIISNTSSLRAID 123 (902)
Q Consensus 49 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ld 123 (902)
.+++.++++|.+|..+...++|++|||++|++++.-+ ..+..++ +|++|+|++|.+++..+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~-------------- 68 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNS-------------- 68 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCH--------------
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHH--------------
Confidence 3455556666555555555556666666666653333 3444555 55566665555554322
Q ss_pred cccCcccCcCCcchhccCcccccCc-----CccceeeecccccCCCCchhhccc-----cccceeecccCcCCCCCChhh
Q 046199 124 CNYNSLSGELPANIFRAIPKDIGNL-----TKLKELYLGYNKLQGEIPQELGNL-----AELEWLSLPRSFLTGTIPSSI 193 (902)
Q Consensus 124 ls~n~l~~~~~~~~~~~ip~~~~~l-----~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~p~~~ 193 (902)
..++.+ ++|++|+|++|++++..+..++.. ++|++|+|++|++++..+..+
T Consensus 69 -------------------~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 69 -------------------DELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp -------------------HHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred -------------------HHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH
Confidence 222222 455555555555554444433332 555666666665554444333
Q ss_pred hc-----cCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCC-CCCEEEccCccccCcCCCcccC----C
Q 046199 194 FN-----LSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLP-NLEVLGIDENHLVGDVPNTIFN----M 263 (902)
Q Consensus 194 ~~-----l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~----l 263 (902)
.. .++|++|+|++|.+++.. + ..++..+..++ +|++|+|++|++++..+..+.. +
T Consensus 130 ~~~l~~~~~~L~~L~Ls~N~l~~~~----------~-----~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 194 (362)
T 3goz_A 130 KQAFSNLPASITSLNLRGNDLGIKS----------S-----DELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASI 194 (362)
T ss_dssp HHHHTTSCTTCCEEECTTSCGGGSC----------H-----HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTS
T ss_pred HHHHHhCCCceeEEEccCCcCCHHH----------H-----HHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhC
Confidence 22 135555555555543210 0 01113333333 5555555555555444333222 2
Q ss_pred -CCCceEeccCcccc
Q 046199 264 -STLKALSLLNNTLS 277 (902)
Q Consensus 264 -~~L~~L~Ls~N~l~ 277 (902)
++|++|+|++|.++
T Consensus 195 ~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 195 PASVTSLDLSANLLG 209 (362)
T ss_dssp CTTCCEEECTTSCGG
T ss_pred CCCCCEEECCCCCCC
Confidence 35555555555554
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=8e-24 Score=229.27 Aligned_cols=198 Identities=19% Similarity=0.153 Sum_probs=144.3
Q ss_pred CCCcEEEeecceecccCCccc--ccccccCeeecccccccCCCCC-------cCCCCCeEeccCccccCCCCccccCCCc
Q 046199 417 VNLTTLHLGNNQLSGSIPITV--GRLNTLQGLGLENNKLEGPIPD-------DLCQLSELHVDHNKLSGPIPACFGNLNS 487 (902)
Q Consensus 417 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 487 (902)
++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+. .+.+|++|++++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 446666666666665555555 5566666666666666544331 2446777777777777777778888888
Q ss_pred CceEecCCCCccCc---c-cccccCCCCceEEEcCCCccCCCCcc----ccccccccceeccCCccccccCccccccC--
Q 046199 488 LRNLSLGSNELSSF---I-PSTFWNLNNILSFDFSSNSLNGSLPL----DIGNMKVVVEINLSRNYLTGDIPTTIGGL-- 557 (902)
Q Consensus 488 L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 557 (902)
|++|+|++|++.+. . +..+..+++|++|++++|+++. ++. .+..+++|++|+|++|+|++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 88888888887652 2 2234678888888888888873 333 24677888899999999988778777776
Q ss_pred -CccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCccee
Q 046199 558 -TNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 558 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999998 5677664 7899999999999864 43 6778899999999998873
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=8.8e-25 Score=242.29 Aligned_cols=250 Identities=17% Similarity=0.188 Sum_probs=166.8
Q ss_pred eeeccCCCCcccCcccccccccccEEEeecCcccccCC----cccCCCC-CCcEEEeecceecccCCcccccc-----cc
Q 046199 373 IVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIP----KEIGNLV-NLTTLHLGNNQLSGSIPITVGRL-----NT 442 (902)
Q Consensus 373 L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 442 (902)
..++.|.+++.+|..+.... +|++|+|++|.|++..+ ..|..++ +|++|+|++|++++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~-~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPH-GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCT-TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCC-CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 34555555555554443333 57777777777765555 5566666 67777777777776666666554 67
Q ss_pred cCeeecccccccCCCCC-------cC-CCCCeEeccCccccCCCCcccc----C-CCcCceEecCCCCccCccc----cc
Q 046199 443 LQGLGLENNKLEGPIPD-------DL-CQLSELHVDHNKLSGPIPACFG----N-LNSLRNLSLGSNELSSFIP----ST 505 (902)
Q Consensus 443 L~~L~L~~N~l~~~~p~-------~l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~~----~~ 505 (902)
|++|+|++|++++..+. .. .+|++|++++|++++..+..+. . .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 77777777777654443 12 4677777777777766554433 3 2578888888888875333 33
Q ss_pred ccCCC-CceEEEcCCCccCCCCccccccc-----cccceeccCCcccccc----CccccccC-CccceEEccCcccCCCc
Q 046199 506 FWNLN-NILSFDFSSNSLNGSLPLDIGNM-----KVVVEINLSRNYLTGD----IPTTIGGL-TNLQLLSLENNRLHGPI 574 (902)
Q Consensus 506 ~~~l~-~L~~L~ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~~ 574 (902)
+..++ +|++|++++|++++..+..+... ++|++|+|++|+|++. ++..+..+ ++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 44554 88888888888877666554433 5888888888888853 45555553 58888888888888655
Q ss_pred c----ccccccccCCeEeCcCccccccC-------CcccccccccccccccCCcceecCC
Q 046199 575 P----ESFGALTSLESLDLSVNNLSGVI-------PISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 575 p----~~~~~l~~L~~L~Ls~N~l~~~~-------p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
+ ..+..+++|+.|+|++|++.+.. +..+..+++|+.||+++|++.+..|
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 33466788888888888855433 3456777888888888888876543
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.1e-25 Score=248.48 Aligned_cols=197 Identities=22% Similarity=0.221 Sum_probs=146.0
Q ss_pred CcccccCcCccceeeecccccCC----CCchhhccccccceeecccCcCCCCCChhh----hcc---------CcccEEe
Q 046199 141 IPKDIGNLTKLKELYLGYNKLQG----EIPQELGNLAELEWLSLPRSFLTGTIPSSI----FNL---------SSLLELD 203 (902)
Q Consensus 141 ip~~~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~----~~l---------~~L~~L~ 203 (902)
+...+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+
T Consensus 86 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 86 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 44455788899999999999986 478888899999999999999875444433 344 8999999
Q ss_pred eeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccCcccc--C---cCCCcccCCCCCceEeccCcccc-
Q 046199 204 FSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLV--G---DVPNTIFNMSTLKALSLLNNTLS- 277 (902)
Q Consensus 204 Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~- 277 (902)
|++|.++. +.+| .+...+..+++|+.|+|++|+++ | ..|..+..+++|+.|+|++|.++
T Consensus 166 L~~n~l~~---------~~~~------~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~ 230 (386)
T 2ca6_A 166 CGRNRLEN---------GSMK------EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH 230 (386)
T ss_dssp CCSSCCTG---------GGHH------HHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH
T ss_pred CCCCCCCc---------HHHH------HHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCc
Confidence 99998652 1222 12246778889999999999987 2 34557888899999999999885
Q ss_pred ---cCCCcCCcccCCCcccceeeccCccCCCC----CCcccc--ccccccEEEccCCcccC----cccccc-cccccccE
Q 046199 278 ---GSLPSSSKNLIGLPNIERLNLGLNNLSGR----IPGFIF--NASKLFLLELTGNSFSG----FIPDTL-VNLRNLEH 343 (902)
Q Consensus 278 ---~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~----~~~~l~--~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~ 343 (902)
+.+|.. +..+++|++|+|++|.+++. ++..+. .+++|++|+|++|.+++ .+|..+ .++++|++
T Consensus 231 ~g~~~l~~~---l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~ 307 (386)
T 2ca6_A 231 LGSSALAIA---LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLF 307 (386)
T ss_dssp HHHHHHHHH---GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHH---HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceE
Confidence 455554 66778888888888888754 445553 37788888888888876 366666 55788888
Q ss_pred EecccccCCCCC
Q 046199 344 LGLGYNYLTSST 355 (902)
Q Consensus 344 L~Ls~N~l~~~~ 355 (902)
|++++|++++..
T Consensus 308 L~l~~N~l~~~~ 319 (386)
T 2ca6_A 308 LELNGNRFSEED 319 (386)
T ss_dssp EECTTSBSCTTS
T ss_pred EEccCCcCCcch
Confidence 888888877654
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.1e-23 Score=213.99 Aligned_cols=197 Identities=18% Similarity=0.202 Sum_probs=131.8
Q ss_pred ccccEEEeecCcccccCCcccCCCCCCcEEEeecce-ecccCCcccccccccCeeeccc-ccccCCCCCcCCCCCeEecc
Q 046199 393 ITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQ-LSGSIPITVGRLNTLQGLGLEN-NKLEGPIPDDLCQLSELHVD 470 (902)
Q Consensus 393 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~L~~L~L~ 470 (902)
.++++|++++|+|++..+..|.++++|++|++++|+ +++..+..|..+++|++|++++ |+++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~---------------- 94 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT---------------- 94 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC----------------
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee----------------
Confidence 378888888888887777778888888888888886 7766666777777777777666 6665
Q ss_pred CccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCce---EEEcCCC-ccCCCCccccccccccc-eeccCCcc
Q 046199 471 HNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNIL---SFDFSSN-SLNGSLPLDIGNMKVVV-EINLSRNY 545 (902)
Q Consensus 471 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~ 545 (902)
+..+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+
T Consensus 95 -----~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 95 -----YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp -----EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred -----EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 3334456666666666666666665 333 55666665 6666666 66655555566667777 77777777
Q ss_pred ccccCccccccCCccceEEccCcc-cCCCcccccccc-ccCCeEeCcCccccccCCcccccccccccccccCC
Q 046199 546 LTGDIPTTIGGLTNLQLLSLENNR-LHGPIPESFGAL-TSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFN 616 (902)
Q Consensus 546 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 616 (902)
++...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|||++|++++. |.. .+++|+.|+++++
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 76333333444 677777777774 775556667777 7777777777777743 333 4556666666665
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=7e-24 Score=245.71 Aligned_cols=205 Identities=24% Similarity=0.379 Sum_probs=160.7
Q ss_pred CCCCCCCCce-----eeeeE-EeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceE
Q 046199 23 KNWTSNTSVC-----SWIGI-TCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKI 96 (902)
Q Consensus 23 ~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 96 (902)
.+|..+.++| .|.|+ .|.. .+++.|+|+++++++ +|+.+. ++|++|+|++|+++ .+| ..+++|++
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 3576666778 79999 7864 368999999999987 888764 88999999999998 888 45789999
Q ss_pred EEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccc
Q 046199 97 LILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELE 176 (902)
Q Consensus 97 L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (902)
|+|++|.|++ +|. +.+ +|++|++++|++++ +|. .+++|++|+|++|++++ +|. .+++|+
T Consensus 105 L~Ls~N~l~~-ip~--l~~--~L~~L~Ls~N~l~~---------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~ 163 (571)
T 3cvr_A 105 LDACDNRLST-LPE--LPA--SLKHLDVDNNQLTM---------LPE---LPALLEYINADNNQLTM-LPE---LPTSLE 163 (571)
T ss_dssp EECCSSCCSC-CCC--CCT--TCCEEECCSSCCSC---------CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCC
T ss_pred EEccCCCCCC-cch--hhc--CCCEEECCCCcCCC---------CCC---cCccccEEeCCCCccCc-CCC---cCCCcC
Confidence 9999999997 676 333 88999999998875 555 46788999999999885 776 578888
Q ss_pred eeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccC-----CCCCCEEEccCcc
Q 046199 177 WLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGN-----LPNLEVLGIDENH 251 (902)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~-----l~~L~~L~Ls~N~ 251 (902)
+|+|++|++++ +|. |. ++|++|+|++|.|+. +| . +.. .+.|+.|+|++|+
T Consensus 164 ~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-----------lp---------~-~~~~L~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 164 VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-----------LP---------A-VPVRNHHSEETEIFFRCRENR 218 (571)
T ss_dssp EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-----------CC---------C-CC--------CCEEEECCSSC
T ss_pred EEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-----------hh---------h-HHHhhhcccccceEEecCCCc
Confidence 89999998885 776 65 788888888888663 22 3 222 1223888888888
Q ss_pred ccCcCCCcccCCCCCceEeccCcccccCCCcC
Q 046199 252 LVGDVPNTIFNMSTLKALSLLNNTLSGSLPSS 283 (902)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 283 (902)
|+ .+|..+..+++|+.|+|++|.+++.+|..
T Consensus 219 l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 219 IT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp CC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred ce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 87 57777777888888888888888777665
No 340
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.88 E-value=7.4e-23 Score=218.63 Aligned_cols=145 Identities=15% Similarity=0.071 Sum_probs=129.3
Q ss_pred hcccccccCeecccceeeEEEEEeCC-CcEEEEEEeeeccc---hhhhhHHHHHHHHHhCCCCCccceeeeeecCCeeEE
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD---GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 799 (902)
..++|++.+.||+|+||.||+|++.. ++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 34789999999999999999999865 89999999975532 334788999999999999999999999999999999
Q ss_pred EEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 800 VLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 800 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
||||++|++|.+++... ....++.+++.|++.||+||| ++||+||||||+||+++.++.+||+++|...
T Consensus 109 v~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 99999999999998432 356678999999999999999 9999999999999999999999999887653
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=2.6e-24 Score=236.16 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=63.8
Q ss_pred CCeeeccccccccCCCccccCC--CcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccC
Q 046199 70 LQTLDLSHNRFSGTIPSSIFSI--STLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGN 147 (902)
Q Consensus 70 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~ 147 (902)
++.+|+++|.+. |..++.+ +++++|++++|.+++..+. ..++++|++||+++|.+++. .+|..++.
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~-------~~~~~~~~ 116 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVS-------TLHGILSQ 116 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHH-------HHHHHHTT
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHH-------HHHHHHhh
Confidence 566667666665 4445555 6666666666666655443 22445555555555544321 13334444
Q ss_pred cCccceeeecccccCCCCchhhccccccceeecccC-cCCCC-CChhhhccCcccEEeeeeC
Q 046199 148 LTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRS-FLTGT-IPSSIFNLSSLLELDFSNN 207 (902)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~Ls~N 207 (902)
+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++|
T Consensus 117 ~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 455555555555544444444545555555555555 34431 3344444445555555544
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=9.2e-25 Score=244.62 Aligned_cols=236 Identities=21% Similarity=0.262 Sum_probs=158.7
Q ss_pred ccccccccccEEEeecCcccccCC----cccCCCCCCcEEEeecc---eecccCCccc-------ccccccCeeeccccc
Q 046199 387 SIGNLPITLEEIYLQNCKIRGNIP----KEIGNLVNLTTLHLGNN---QLSGSIPITV-------GRLNTLQGLGLENNK 452 (902)
Q Consensus 387 ~~~~l~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~~N~ 452 (902)
.+..++ +|+.|+|++|.|+...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|+
T Consensus 27 ~l~~~~-~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 27 VLLEDD-SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHCS-CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCC-CccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 333344 45555555555554322 23445556666666553 3333344333 455666666666666
Q ss_pred ccCC----CCCc---CCCCCeEeccCccccCCCCcc----ccCC---------CcCceEecCCCCcc-Cccc---ccccC
Q 046199 453 LEGP----IPDD---LCQLSELHVDHNKLSGPIPAC----FGNL---------NSLRNLSLGSNELS-SFIP---STFWN 508 (902)
Q Consensus 453 l~~~----~p~~---l~~L~~L~L~~N~l~~~~p~~----~~~l---------~~L~~L~L~~N~l~-~~~~---~~~~~ 508 (902)
+.+. +|.. +.+|+.|+|++|.+++..+.. +..+ ++|++|++++|+++ +..+ ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 6542 2322 235666666666665433333 3333 78888888888887 3344 46667
Q ss_pred CCCceEEEcCCCccC--C---CCccccccccccceeccCCcccc----ccCccccccCCccceEEccCcccCCC----cc
Q 046199 509 LNNILSFDFSSNSLN--G---SLPLDIGNMKVVVEINLSRNYLT----GDIPTTIGGLTNLQLLSLENNRLHGP----IP 575 (902)
Q Consensus 509 l~~L~~L~ls~N~l~--~---~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 575 (902)
+++|++|++++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 888888999888887 2 34447788888999999999986 57788888999999999999999865 56
Q ss_pred cccc--ccccCCeEeCcCccccc----cCCccc-ccccccccccccCCcceecCC
Q 046199 576 ESFG--ALTSLESLDLSVNNLSG----VIPISL-EKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 576 ~~~~--~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~l~~N~l~~~~p 623 (902)
..+. .+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 6663 38899999999999997 477777 668999999999999886554
No 343
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88 E-value=1.3e-22 Score=218.53 Aligned_cols=148 Identities=25% Similarity=0.403 Sum_probs=129.3
Q ss_pred ccccccc-CeecccceeeEEEEEeC-CCcEEEEEEeeeccchhhhhHHHHHHHH-HhCCCCCccceeeeeec----CCee
Q 046199 725 TDHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVL-KSVRHRNLVKIISSCSN----GNFK 797 (902)
Q Consensus 725 ~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 797 (902)
.++|.+. +.||+|+||.||+|++. +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 78999999999999985 4899999998643 5677888887 56689999999999876 6788
Q ss_pred EEEEEccCCCChHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCc
Q 046199 798 ALVLEYMANGSLEKCLYSSN-RSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDD---DMVAHLSDFGIA 873 (902)
Q Consensus 798 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kL~DFG~a 873 (902)
|+||||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997654 46899999999999999999999 999999999999999998 789999999999
Q ss_pred eecCCCc
Q 046199 874 KLLNGEE 880 (902)
Q Consensus 874 ~~~~~~~ 880 (902)
.......
T Consensus 168 ~~~~~~~ 174 (299)
T 3m2w_A 168 KETTGEK 174 (299)
T ss_dssp EECTTCG
T ss_pred ccccccc
Confidence 8776443
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3.6e-22 Score=207.63 Aligned_cols=196 Identities=21% Similarity=0.282 Sum_probs=134.8
Q ss_pred CCceeeeccCCCCcccCcccccccccccEEEeecCc-ccccCCcccCCCCCCcEEEeec-ceecccCCcccccccccCee
Q 046199 369 SSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCK-IRGNIPKEIGNLVNLTTLHLGN-NQLSGSIPITVGRLNTLQGL 446 (902)
Q Consensus 369 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 446 (902)
++++|++++|++.+..+..|..++ +|++|++++|+ ++++.+..|.++++|++|++++ |++++..+..|..+++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~-~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLP-NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCT-TCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCC-CCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 344445555555444444566666 77777777775 7766666777888888888887 78876666777777777777
Q ss_pred ecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCc---eEecCCC-CccCcccccccCCCCce-EEEcCCCc
Q 046199 447 GLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLR---NLSLGSN-ELSSFIPSTFWNLNNIL-SFDFSSNS 521 (902)
Q Consensus 447 ~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~ls~N~ 521 (902)
++++|++++ +|. |..+++|+ +|++++| +++++.+..|.++++|+ +|++++|+
T Consensus 111 ~l~~n~l~~----------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM----------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS----------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc----------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 777777662 222 44455555 7777777 77766666677777777 77777777
Q ss_pred cCCCCccccccccccceeccCCcc-ccccCccccccC-CccceEEccCcccCCCccccccccccCCeEeCcCc
Q 046199 522 LNGSLPLDIGNMKVVVEINLSRNY-LTGDIPTTIGGL-TNLQLLSLENNRLHGPIPESFGALTSLESLDLSVN 592 (902)
Q Consensus 522 l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 592 (902)
++...+..|.. ++|++|++++|+ +++..+..|.++ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 77333333433 778888888884 876667778888 888888888888885 4443 5678888888776
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.6e-22 Score=215.73 Aligned_cols=190 Identities=21% Similarity=0.342 Sum_probs=119.8
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNK 473 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~ 473 (902)
+|++|++++|.++. +| .+..+++|++|++++|++++..+ +..+++|++|++++|++++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~------------------ 99 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN------------------ 99 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC------------------
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC------------------
Confidence 56666666666663 23 46666777777777777764333 6666666666666665552
Q ss_pred ccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTT 553 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 553 (902)
. + .+..+++|++|++++|++++.. .+..+++|++|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 100 ---~-~-~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 100 ---V-S-AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp ---C-G-GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred ---c-h-hhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 1 1 3555666666666666666532 26666666666666666665332 6666666777777776664332
Q ss_pred cccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCccee
Q 046199 554 IGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 554 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 620 (902)
+..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++
T Consensus 169 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 6677777777777777765433 6677777777777777775442 6677777777777777764
No 346
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.87 E-value=6.3e-23 Score=231.29 Aligned_cols=167 Identities=19% Similarity=0.200 Sum_probs=128.2
Q ss_pred hcccccccCeecccceeeEEEEEeC-CCcEEEEEEeeeccc---hhhhhHHHHHHHHHhCCC-CCcccee----------
Q 046199 724 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSVRH-RNLVKII---------- 788 (902)
Q Consensus 724 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~---------- 788 (902)
....|...+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+.+++.++| ++.....
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3456888899999999999999975 489999999874332 235789999999999987 3221111
Q ss_pred -----------eeeec-----CCeeEEEEEccCCCChHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 046199 789 -----------SSCSN-----GNFKALVLEYMANGSLEKCLY------SSNRSLDIFQRLSIMIDVALALEYLHFGYSNP 846 (902)
Q Consensus 789 -----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 846 (902)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.||+.||+||| ++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 11111 12356777766 679998884 22344777889999999999999999 999
Q ss_pred eEEcCCCCCCEEEcCCCcEEEEeecCceecCCCccceecccccccccccccc
Q 046199 847 VVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLW 898 (902)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l 898 (902)
|+||||||+|||++.++.+||+|||+|+..... ....+| +.|||||++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETT 279 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhh
Confidence 999999999999999999999999999875432 344567 999999998
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.3e-22 Score=215.18 Aligned_cols=151 Identities=30% Similarity=0.446 Sum_probs=81.5
Q ss_pred ccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCcc
Q 046199 145 IGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIP 224 (902)
Q Consensus 145 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip 224 (902)
++.+++|++|+|++|++++ +| .+..+++|++|+|++|++++ +|. +..+++|++|++++|.++.+
T Consensus 81 ~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~------------ 144 (308)
T 1h6u_A 81 LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI------------ 144 (308)
T ss_dssp GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC------------
T ss_pred HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC------------
Confidence 4455555555555555552 22 35555555555555555553 232 55555555555555554321
Q ss_pred ccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCC
Q 046199 225 RNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLS 304 (902)
Q Consensus 225 ~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~ 304 (902)
..++.+++|+.|+|++|++++. +. +..+++|+.|++++|++++..+ +..+++|++|++++|+++
T Consensus 145 ---------~~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-----l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 145 ---------SPLAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP-----LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp ---------GGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-----GGGCTTCCEEECTTSCCC
T ss_pred ---------ccccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh-----hcCCCCCCEEEccCCccC
Confidence 1144555555555555555532 22 5555666666666666553221 445566666666666666
Q ss_pred CCCCccccccccccEEEccCCcccC
Q 046199 305 GRIPGFIFNASKLFLLELTGNSFSG 329 (902)
Q Consensus 305 ~~~~~~l~~l~~L~~L~Ls~N~l~~ 329 (902)
+..+ +..+++|+.|+|++|++++
T Consensus 209 ~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 209 DVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp BCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cccc--ccCCCCCCEEEccCCeeec
Confidence 4442 5666677777777777664
No 348
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=2.1e-22 Score=213.89 Aligned_cols=152 Identities=14% Similarity=0.102 Sum_probs=121.4
Q ss_pred HHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc------------------hhhhhHHHHHHHHHhC
Q 046199 718 YRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD------------------GALKSFDAECEVLKSV 779 (902)
Q Consensus 718 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 779 (902)
+.........|.+.+.||+|+||.||+|++.+++.||+|+++.... .....+.+|+++++.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444555667778899999999999999996699999999864321 1346788999999999
Q ss_pred CCCCccceeeeeecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 046199 780 RHRNLVKIISSCSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILL 859 (902)
Q Consensus 780 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (902)
+ | +++.+++.. +..|+||||++|++|.+ +.. .....++.|++.||+||| ++||+||||||+||++
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 226 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEE
Confidence 9 4 566665543 55699999999999988 421 224579999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceecCCCccceecccccccccccccc
Q 046199 860 DDDMVAHLSDFGIAKLLNGEESMRTQTLGTIGYMAPGLW 898 (902)
Q Consensus 860 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~APE~l 898 (902)
+ ++.+||+|||+|+.. ..|+|||++
T Consensus 227 ~-~~~vkl~DFG~a~~~-------------~~~~a~e~l 251 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV-------------GEEGWREIL 251 (282)
T ss_dssp E-TTEEEECCCTTCEET-------------TSTTHHHHH
T ss_pred E-CCcEEEEECCCCeEC-------------CCCCHHHHH
Confidence 9 999999999999743 346777765
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=9.9e-22 Score=199.54 Aligned_cols=156 Identities=25% Similarity=0.320 Sum_probs=93.1
Q ss_pred CCCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCC
Q 046199 28 NTSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGS 107 (902)
Q Consensus 28 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~ 107 (902)
..+.|.|.+|.|+... ++ .+|..+ .++|++|+|++|++++..+..+..+++|++|+|++|++++
T Consensus 3 ~~C~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~- 66 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS- 66 (208)
T ss_dssp TTCEEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-
T ss_pred CCCEECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-
Confidence 3456999999996432 32 445444 3589999999999985555567889999999999999884
Q ss_pred CCcccccCCCcccEEEcccCcccCcCCcchhccCc-ccccCcCccceeeecccccCCCCchhhccccccceeecccCcCC
Q 046199 108 FPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIP-KDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLT 186 (902)
Q Consensus 108 ~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (902)
+|...++++++|++||+++|++++ +| ..++.+++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQS---------LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCC---------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cChhhcCCCCCcCEEECCCCcCCc---------cCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 344444555555555555555542 22 22345555555555555555433334455555555555555555
Q ss_pred CCCChhhhccCcccEEeeeeCC
Q 046199 187 GTIPSSIFNLSSLLELDFSNNS 208 (902)
Q Consensus 187 ~~~p~~~~~l~~L~~L~Ls~N~ 208 (902)
+..+..+..+++|++|+|++|.
T Consensus 138 ~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 138 SVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSCC
T ss_pred eeCHHHhccCCCccEEEecCCC
Confidence 4333344455555555555554
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=6.8e-21 Score=209.86 Aligned_cols=224 Identities=16% Similarity=0.171 Sum_probs=152.5
Q ss_pred cccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCC-ccccc
Q 046199 235 EIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIP-GFIFN 313 (902)
Q Consensus 235 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~ 313 (902)
.++.+. -++++.++++++ .+|..+. +++++|+|++|+|+. +|... |.++++|++|+|++|++.+.+| +.|.+
T Consensus 5 ~~C~C~-~~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~-i~~~~--f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 5 RICHCS-NRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRV-IQKGA--FSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SSSEEE-TTEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSE-ECTTS--STTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred CccEee-CCEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCC-cCHHH--HcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 344443 367888899988 6777663 678899999999984 45432 7788899999999998865544 56778
Q ss_pred ccccc-EEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeecc-CCCCcccCcccccc
Q 046199 314 ASKLF-LLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAE-NPLNGVLPSSIGNL 391 (902)
Q Consensus 314 l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l 391 (902)
++++. .++++.|+++...|..|..+++|++|++++|+++...+ ..+....++..+++.+ +.+....+..|..+
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~-----~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD-----VHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC-----CTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCc-----hhhcccchhhhhhhccccccccccccchhhc
Confidence 87765 46677788888878888889999999999998887665 4445556667777755 45555445556666
Q ss_pred cccccEEEeecCcccccCCcccCCCCCCcEEEeec-ceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEecc
Q 046199 392 PITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGN-NQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVD 470 (902)
Q Consensus 392 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~ 470 (902)
+..++.|+|++|+|+.+.+..| ...+|+.|++++ |.++...+..|..+++|++|||++|+|+...+..+.+|+.|.+.
T Consensus 153 ~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l 231 (350)
T 4ay9_X 153 SFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR 231 (350)
T ss_dssp BSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECT
T ss_pred chhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhc
Confidence 5567777777777775544444 345677777764 55664444567777777777777777763222334445555443
Q ss_pred C
Q 046199 471 H 471 (902)
Q Consensus 471 ~ 471 (902)
+
T Consensus 232 ~ 232 (350)
T 4ay9_X 232 S 232 (350)
T ss_dssp T
T ss_pred c
Confidence 3
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.7e-21 Score=213.14 Aligned_cols=215 Identities=18% Similarity=0.177 Sum_probs=121.3
Q ss_pred ceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCC-cccccccccCe-eec
Q 046199 371 KYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIP-ITVGRLNTLQG-LGL 448 (902)
Q Consensus 371 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 448 (902)
+.++.++++++ .+|..+ |.++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| .+|.+++++.+ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 56777788777 456544 3478888888888887666778888888888888888765444 45666666554 344
Q ss_pred ccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCC-CccCCCCc
Q 046199 449 ENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSS-NSLNGSLP 527 (902)
Q Consensus 449 ~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~ 527 (902)
+.|+++ ++.|..|.++++|++|++++|+++...+..+....++..|++.+ |++....+
T Consensus 88 ~~N~l~---------------------~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 88 KANNLL---------------------YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp EETTCC---------------------EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT
T ss_pred cCCccc---------------------ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc
Confidence 445554 44455555555555555555555555444555555555555533 34443333
Q ss_pred ccccccc-ccceeccCCccccccCccccccCCccceEEccC-cccCCCccccccccccCCeEeCcCccccccCCcccccc
Q 046199 528 LDIGNMK-VVVEINLSRNYLTGDIPTTIGGLTNLQLLSLEN-NRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKL 605 (902)
Q Consensus 528 ~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 605 (902)
..|..+. .++.|+|++|+|+. +|.......+|+.|++++ |+++...++.|+.+++|+.|||++|+|+...+..+.++
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L 225 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL 225 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC
T ss_pred cchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccc
Confidence 4444443 35555555555553 333333334555555553 44443333445556666666666666654333344444
Q ss_pred cccccc
Q 046199 606 VYLKDL 611 (902)
Q Consensus 606 ~~L~~L 611 (902)
++|+.+
T Consensus 226 ~~L~~l 231 (350)
T 4ay9_X 226 KKLRAR 231 (350)
T ss_dssp CEEECT
T ss_pred hHhhhc
Confidence 444433
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=1.2e-22 Score=244.44 Aligned_cols=214 Identities=26% Similarity=0.293 Sum_probs=104.3
Q ss_pred CChhHHHHHHHHHhccccC------CCC-CCCCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccc
Q 046199 5 INTTDQQALLALKARITAK------NWT-SNTSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSH 77 (902)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~------~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~ 77 (902)
+...+++||+++..+.... +|. ..+..+.|.++++.. .+++.|+|.++++.+ ++..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhH-----hhcCccCc
Confidence 4567889999999887653 452 234567898888754 568999998888875 23322 33444444
Q ss_pred ccccc---------CCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCc
Q 046199 78 NRFSG---------TIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNL 148 (902)
Q Consensus 78 n~l~~---------~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l 148 (902)
|.+.+ ..|..+..++.|++|+|++|.+. .+|..+..+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~----------------------------------~l~~~~~~l 246 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF----------------------------------NISANIFKY 246 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS----------------------------------CCCGGGGGC
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC----------------------------------CCChhhcCC
Confidence 44431 23444444555555555555443 155666667
Q ss_pred CccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCcccccc
Q 046199 149 TKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLW 228 (902)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~ 228 (902)
++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~------------------ 306 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT------------------ 306 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC------------------
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC------------------
Confidence 77777777777777 67777777777777777777777 66777777777777777777654
Q ss_pred ccCCCccccCCCCCCEEEccCccccCcCCCcccCCCC-CceEeccCcccccCCCc
Q 046199 229 QCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMST-LKALSLLNNTLSGSLPS 282 (902)
Q Consensus 229 ~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 282 (902)
.+|..|+++++|++|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 307 --~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 307 --TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp --CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred --ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 23466777777777777777777766666654322 22366777777666554
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6e-21 Score=193.77 Aligned_cols=172 Identities=24% Similarity=0.263 Sum_probs=146.8
Q ss_pred eeecccccccCCCCCcC-CCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccC
Q 046199 445 GLGLENNKLEGPIPDDL-CQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLN 523 (902)
Q Consensus 445 ~L~L~~N~l~~~~p~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 523 (902)
.++.+++.++ .+|..+ .+|++|++++|++++..+..|.++++|++|++++|+++++.+..|..+++|++|++++|+++
T Consensus 11 ~v~c~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp EEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EEEecCCCcc-CCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 4455555554 334333 37888888888888777778899999999999999999887788899999999999999999
Q ss_pred CCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccc
Q 046199 524 GSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLE 603 (902)
Q Consensus 524 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 603 (902)
+..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+.
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------ 163 (208)
T 2o6s_A 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------ 163 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------
T ss_pred ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC------
Confidence 87777789999999999999999987777899999999999999999987777799999999999999988754
Q ss_pred cccccccccccCCcceecCCC
Q 046199 604 KLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 604 ~l~~L~~L~l~~N~l~~~~p~ 624 (902)
+++|+.|++++|.++|.+|.
T Consensus 164 -~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 164 -CPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp -TTTTHHHHHHHHHCTTTBBC
T ss_pred -CCCHHHHHHHHHhCCceeec
Confidence 45799999999999999996
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=5.6e-21 Score=221.38 Aligned_cols=189 Identities=23% Similarity=0.328 Sum_probs=107.1
Q ss_pred CCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeec
Q 046199 369 SSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGL 448 (902)
Q Consensus 369 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 448 (902)
+++.|++++|.+.+ +|..+. + +|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +..
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~-~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--------- 120 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--P-QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--------- 120 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--T-TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT---------
T ss_pred CccEEEeCCCCCCc-cCHhHc--C-CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc---------
Confidence 45555555555554 343332 2 4555555555555 233 223455555555555553 333 322
Q ss_pred ccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCcc
Q 046199 449 ENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPL 528 (902)
Q Consensus 449 ~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 528 (902)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|++++|+|++ +|.
T Consensus 121 --------------~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 121 --------------SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp --------------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred --------------CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch
Confidence 45555555555554 333 35566666666666665 333 34566666666666665 444
Q ss_pred ccccccccceeccCCccccccCccccccCCcc-------ceEEccCcccCCCccccccccccCCeEeCcCccccccCCcc
Q 046199 529 DIGNMKVVVEINLSRNYLTGDIPTTIGGLTNL-------QLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPIS 601 (902)
Q Consensus 529 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 601 (902)
|. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..
T Consensus 178 -l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 44 56666666666666 4454 443 55 77788888777 46777777778888888888887777777
Q ss_pred cccccc
Q 046199 602 LEKLVY 607 (902)
Q Consensus 602 l~~l~~ 607 (902)
+..++.
T Consensus 250 l~~l~~ 255 (571)
T 3cvr_A 250 LSQQTA 255 (571)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 766554
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=2.4e-21 Score=198.22 Aligned_cols=156 Identities=26% Similarity=0.298 Sum_probs=106.6
Q ss_pred eEeccCccccCCCCccccCCCcCceEecCCCCccCccc-ccccCCCCceEEEcCCCccCCCCccccccccccceeccCCc
Q 046199 466 ELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIP-STFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRN 544 (902)
Q Consensus 466 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 544 (902)
.+++++|.+++ +|..+. +.+++|+|++|+|++..+ ..|..+++|++|++++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44555555543 333221 234566666666665533 34566666666666666666655556666777777777777
Q ss_pred cccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCC
Q 046199 545 YLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 545 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|.|.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77766666777777888888888888777777788888888888888888877777788888888888888888877664
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=5.8e-21 Score=211.29 Aligned_cols=178 Identities=26% Similarity=0.248 Sum_probs=149.0
Q ss_pred eeecccccccCCCCCcCC-CCCeEeccCccccCCCCcccc-CCCcCceEecCCCCccCcccccccCCCCceEEEcCCCcc
Q 046199 445 GLGLENNKLEGPIPDDLC-QLSELHVDHNKLSGPIPACFG-NLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSL 522 (902)
Q Consensus 445 ~L~L~~N~l~~~~p~~l~-~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 522 (902)
.+++++|+++ .+|..+. .++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|
T Consensus 22 ~l~c~~~~l~-~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l 100 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL 100 (361)
T ss_dssp EEECCSSCCS-SCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEEeCCCCcC-ccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcC
Confidence 4555555555 3454444 577888888888888788887 899999999999999998888899999999999999999
Q ss_pred CCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccc---cccccCCeEeCcCccccccCC
Q 046199 523 NGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESF---GALTSLESLDLSVNNLSGVIP 599 (902)
Q Consensus 523 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p 599 (902)
++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++..+
T Consensus 101 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 180 (361)
T 2xot_A 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL 180 (361)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCH
T ss_pred CcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCH
Confidence 98777789999999999999999998889999999999999999999997555556 679999999999999997666
Q ss_pred cccccccc--cccccccCCcceecCC
Q 046199 600 ISLEKLVY--LKDLNLSFNRLEGEIP 623 (902)
Q Consensus 600 ~~l~~l~~--L~~L~l~~N~l~~~~p 623 (902)
..+..++. |+.|+|++|+|.|.+.
T Consensus 181 ~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 181 TDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp HHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HHhhhccHhhcceEEecCCCccCCcC
Confidence 77888887 4899999999998654
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=5.8e-21 Score=195.34 Aligned_cols=138 Identities=21% Similarity=0.294 Sum_probs=88.0
Q ss_pred CcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEc
Q 046199 486 NSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSL 565 (902)
Q Consensus 486 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 565 (902)
++|+.|++++|+|+++.+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 34555555555555555555555555555555555555555555666666666666666666444455666677777777
Q ss_pred cCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 566 ENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 566 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
++|+|++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|.+.++
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 7777776666677777777777777777776666667777777777777777776544
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=4.6e-20 Score=189.98 Aligned_cols=163 Identities=26% Similarity=0.341 Sum_probs=139.1
Q ss_pred CCCCCCCCceeeeeEEeeCCCCcEEEEEeccCCcceecCcccCCCCCCCeeeccccccccCCCccccCCCcceEEEecCc
Q 046199 23 KNWTSNTSVCSWIGITCDVSTHRVTALNISDFGLTGTISSQLGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDN 102 (902)
Q Consensus 23 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n 102 (902)
.-|..+.+.|+|.+|.|... +++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 34555678999999999642 232 6676554 89999999999999877889999999999999999
Q ss_pred cccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeeccc
Q 046199 103 QLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPR 182 (902)
Q Consensus 103 ~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (902)
+++ .+|...++++++|++||+++|++++. .|..++.+++|++|+|++|+++ .+|..+..+++|++|+|++
T Consensus 75 ~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l--------~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 144 (229)
T 3e6j_A 75 QLG-ALPVGVFDSLTQLTVLDLGTNQLTVL--------PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQ 144 (229)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCS
T ss_pred CCC-CcChhhcccCCCcCEEECCCCcCCcc--------ChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCC
Confidence 996 56777778999999999999999842 2345688999999999999999 8999999999999999999
Q ss_pred CcCCCCCChhhhccCcccEEeeeeCCCC
Q 046199 183 SFLTGTIPSSIFNLSSLLELDFSNNSLT 210 (902)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 210 (902)
|++++..+..|..+++|++|+|++|.+.
T Consensus 145 N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 145 NQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 9999776678999999999999999854
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7.7e-20 Score=186.98 Aligned_cols=154 Identities=23% Similarity=0.322 Sum_probs=135.2
Q ss_pred eeecccccccCCCCCcCC-CCCeEeccCccccCCCC-ccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCcc
Q 046199 445 GLGLENNKLEGPIPDDLC-QLSELHVDHNKLSGPIP-ACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSL 522 (902)
Q Consensus 445 ~L~L~~N~l~~~~p~~l~-~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 522 (902)
.+++++|.++ .+|..+. .++.|+|++|+|++..| ..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l 93 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL 93 (220)
T ss_dssp EEECCSSCCS-SCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EeEeCCCCcc-cCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCcc
Confidence 5555555555 3454444 56788888888887754 5689999999999999999998888999999999999999999
Q ss_pred CCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCC
Q 046199 523 NGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIP 599 (902)
Q Consensus 523 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 599 (902)
++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 94 ENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99888889999999999999999999989999999999999999999999889999999999999999999987654
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=3.6e-22 Score=232.79 Aligned_cols=204 Identities=25% Similarity=0.209 Sum_probs=120.0
Q ss_pred CCCCCCCeeeccccccccCCCccccCCCcceEEEecCcc-------------ccCCCCcccccCCCcccEEE-cccCccc
Q 046199 65 GNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQ-------------LSGSFPSFIISNTSSLRAID-CNYNSLS 130 (902)
Q Consensus 65 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~-------------l~~~~~~~~~~~~~~L~~ld-ls~n~l~ 130 (902)
..+++|+.|+|++|+++ .+|++++++++|+.|++++|. +.+.+| ..++++++|+.|| ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~-~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEK-ETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHH-HHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCH-HHHHHHHhcccCcchhhcccc
Confidence 67899999999999998 899999999999999998775 233222 2234455555555 3433321
Q ss_pred CcCCcchhccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCC
Q 046199 131 GELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLT 210 (902)
Q Consensus 131 ~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 210 (902)
.|+.+.+++|.++ .+|. ..|+.|+|++|++++ +|. |+++++|++|+|++|.|+
T Consensus 424 -------------------~L~~l~l~~n~i~-~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 424 -------------------DLRSKFLLENSVL-KMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp -------------------HHHHHHHHHHHHH-HHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC
T ss_pred -------------------hhhhhhhhccccc-ccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc
Confidence 1111222222222 1111 135666666666663 454 666666666666666644
Q ss_pred ccccccccccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCC-CcCCcccCC
Q 046199 211 GFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSL-PSSSKNLIG 289 (902)
Q Consensus 211 ~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~ 289 (902)
.+|..++++++|+.|+|++|+|++ +| .++.+++|+.|+|++|++++.. |.. +..
T Consensus 477 --------------------~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~---l~~ 531 (567)
T 1dce_A 477 --------------------ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQP---LVS 531 (567)
T ss_dssp --------------------CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGG---GGG
T ss_pred --------------------ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHH---Hhc
Confidence 233556666666666666666664 44 5666666666666666666544 544 555
Q ss_pred CcccceeeccCccCCCCCCcc---ccccccccEEEc
Q 046199 290 LPNIERLNLGLNNLSGRIPGF---IFNASKLFLLEL 322 (902)
Q Consensus 290 l~~L~~L~Ls~N~l~~~~~~~---l~~l~~L~~L~L 322 (902)
+++|++|+|++|.+++.+|.. +..+++|+.|++
T Consensus 532 l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 532 CPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 666666666666666544322 223566666654
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=3.8e-20 Score=216.95 Aligned_cols=173 Identities=24% Similarity=0.338 Sum_probs=106.5
Q ss_pred cCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccc
Q 046199 146 GNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPR 225 (902)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~ 225 (902)
..+++|++|+|++|.+. .+| .++.+++|+.|+|++|++++..| +..+++|++|+|++|.|+.+
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l------------- 102 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL------------- 102 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-------------
T ss_pred hcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-------------
Confidence 34556666666666665 333 46666666666666666664333 66666666666666665421
Q ss_pred cccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCC
Q 046199 226 NLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSG 305 (902)
Q Consensus 226 ~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 305 (902)
+.++.+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+.+
T Consensus 103 --------~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-----~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 103 --------SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-----TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp --------TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-----GGGGSCTTCSEEECCSSCCCC
T ss_pred --------hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-----hhhcccCCCCEEECcCCcCCC
Confidence 245566666666666666663 2 3466666666666666666643 125566667777777777665
Q ss_pred CCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCC
Q 046199 306 RIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSS 354 (902)
Q Consensus 306 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 354 (902)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 554 66667777777777777653 2466677777777777777653
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.1e-19 Score=194.31 Aligned_cols=126 Identities=24% Similarity=0.348 Sum_probs=61.5
Q ss_pred CCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccc
Q 046199 66 NLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDI 145 (902)
Q Consensus 66 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~ 145 (902)
.+++|++|++++|.++ .+|. +..+++|++|+|++|++++..+ ++++++|++|++++|++++ +| .+
T Consensus 44 ~l~~L~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~~~~---l~~l~~L~~L~l~~n~l~~---------~~-~l 108 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTDIKP---LANLKNLGWLFLDENKVKD---------LS-SL 108 (291)
T ss_dssp HHHTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC---------GG-GG
T ss_pred hcCcccEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCCCcc---cccCCCCCEEECCCCcCCC---------Ch-hh
Confidence 4455555566655555 3332 5555555666665555554322 3444555555555554432 22 24
Q ss_pred cCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCC
Q 046199 146 GNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLT 210 (902)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 210 (902)
+.+++|++|+|++|++++ + +.+..+++|++|+|++|++++. ..+..+++|++|+|++|.++
T Consensus 109 ~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 109 KDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp TTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 445555555555555542 2 2344455555555555555432 23444555555555555433
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.6e-19 Score=184.55 Aligned_cols=152 Identities=22% Similarity=0.325 Sum_probs=134.9
Q ss_pred CeeecccccccCCCCCcCC-CCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCcc
Q 046199 444 QGLGLENNKLEGPIPDDLC-QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSL 522 (902)
Q Consensus 444 ~~L~L~~N~l~~~~p~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 522 (902)
+.+++++|.++ .+|..++ +++.|++++|+|+++.+..|.++++|+.|+|++|+|+++.|..|.++++|++|+|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TEEECTTSCCS-SCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCcC-cCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 34555555555 4455444 788888888888888888999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccc
Q 046199 523 NGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSG 596 (902)
Q Consensus 523 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 596 (902)
++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 98777778999999999999999999999999999999999999999998888889999999999999999975
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.7e-19 Score=184.29 Aligned_cols=157 Identities=22% Similarity=0.244 Sum_probs=114.1
Q ss_pred CCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccC
Q 046199 463 QLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLS 542 (902)
Q Consensus 463 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 542 (902)
+-+.++.++++++. +|..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|+...+..|..+++|++|+|+
T Consensus 20 s~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 44556666666653 333222 567777777777777667777777777777777777766555666777777777777
Q ss_pred CccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecC
Q 046199 543 RNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEI 622 (902)
Q Consensus 543 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 622 (902)
+|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|++.|.+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 77777666666777888888888888887 67777888888888888888888766667788888888888888888776
Q ss_pred C
Q 046199 623 P 623 (902)
Q Consensus 623 p 623 (902)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 6
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=2.4e-19 Score=210.22 Aligned_cols=173 Identities=22% Similarity=0.333 Sum_probs=114.3
Q ss_pred cCCCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcc
Q 046199 64 LGNLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPK 143 (902)
Q Consensus 64 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~ 143 (902)
+..|++|++|+|++|.++ .+| .+..+++|++|+|++|.+++..| +.++++|+.|+|++|.+++ +|
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~---------l~- 103 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKD---------LS- 103 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCC---------CT-
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCC---------Ch-
Confidence 456777778888888776 555 47777888888888888776433 5667777777777777653 23
Q ss_pred cccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCc
Q 046199 144 DIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSI 223 (902)
Q Consensus 144 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~i 223 (902)
.++.+++|++|+|++|.+++ + +.+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.|+++
T Consensus 104 ~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~----------- 168 (605)
T 1m9s_A 104 SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI----------- 168 (605)
T ss_dssp TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC-----------
T ss_pred hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc-----------
Confidence 56667777777777777763 3 3466677777777777777643 4566677777777777765421
Q ss_pred cccccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCccccc
Q 046199 224 PRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSG 278 (902)
Q Consensus 224 p~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 278 (902)
+. +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|.+++
T Consensus 169 ---------~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 169 ---------VP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ---------GG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred ---------hh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 12 56666777777777777642 246666677777777776663
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=4.8e-22 Score=231.77 Aligned_cols=166 Identities=23% Similarity=0.227 Sum_probs=120.4
Q ss_pred ecccCCcccccccccCeee-cccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCccccccc
Q 046199 429 LSGSIPITVGRLNTLQGLG-LENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFW 507 (902)
Q Consensus 429 l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 507 (902)
+.+..|..++.+++|+.|+ ++.|.+. +|+.+.+++|.+++..+. .|+.|+|++|+|++ +|. |+
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~--------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~ 460 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLD--------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LE 460 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHH--------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GG
T ss_pred cccCCHHHHHHHHhcccCcchhhcccc--------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-cc
Confidence 4556677777888888887 6777654 566667777777654332 47778888888877 354 77
Q ss_pred CCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCc-cccccccccCCe
Q 046199 508 NLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPI-PESFGALTSLES 586 (902)
Q Consensus 508 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 586 (902)
.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.+ |..|+.+++|+.
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~ 537 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVL 537 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCE
Confidence 7888888888888887 567778888888888888888875 56 7778888888888888888766 778888888888
Q ss_pred EeCcCccccccCCcc---cccccccccccc
Q 046199 587 LDLSVNNLSGVIPIS---LEKLVYLKDLNL 613 (902)
Q Consensus 587 L~Ls~N~l~~~~p~~---l~~l~~L~~L~l 613 (902)
|+|++|+|++.+|.. +..+++|+.||+
T Consensus 538 L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 538 LNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp EECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 888888887655422 233667777653
No 367
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=4e-19 Score=190.04 Aligned_cols=167 Identities=26% Similarity=0.415 Sum_probs=79.5
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNK 473 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~ 473 (902)
+|+.|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|++|++++|+++
T Consensus 47 ~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~------------------- 103 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK------------------- 103 (291)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-------------------
T ss_pred cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC-------------------
Confidence 455555555555432 2 24555555555555555553322 444444444444444433
Q ss_pred ccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTT 553 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 553 (902)
+ +| .+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..|
T Consensus 104 --~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 104 --D-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp --C-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred --C-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 1 11 245555555555555555543 2345555555555555555532 334444444444444444443322
Q ss_pred cccCCccceEEccCcccCCCccccccccccCCeEeCcCcccc
Q 046199 554 IGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLS 595 (902)
Q Consensus 554 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 595 (902)
+..+++|+.|+|++|++++ +| .+..+++|+.|++++|+++
T Consensus 174 l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 4444555555555555543 22 2444455555555555444
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.1e-19 Score=191.15 Aligned_cols=170 Identities=21% Similarity=0.279 Sum_probs=99.8
Q ss_pred CCCCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccc
Q 046199 66 NLSSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDI 145 (902)
Q Consensus 66 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~ 145 (902)
.+.+++.+++++|.++ .++ .+..+++|++|++++|.++. +| .++.+++|++|++++|++++ +|. +
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~L~~N~i~~---------~~~-l 81 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQS-LA--GMQFFTNLKELHLSHNQISD---------LSP-L 81 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCC---------CGG-G
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCccc-ch--HHhhCCCCCEEECCCCccCC---------Chh-h
Confidence 3556667777777776 444 46677777777777777763 33 24455666666666665543 333 5
Q ss_pred cCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccc
Q 046199 146 GNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPR 225 (902)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~ 225 (902)
+.+++|++|+|++|++++ +|.... ++|++|+|++|++++ +| .+.++++|++|+|++|+|+++
T Consensus 82 ~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~------------- 143 (263)
T 1xeu_A 82 KDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI------------- 143 (263)
T ss_dssp TTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-------------
T ss_pred ccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-------------
Confidence 566666666666666663 443222 666666666666663 23 356666666666666665421
Q ss_pred cccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCccccc
Q 046199 226 NLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSG 278 (902)
Q Consensus 226 ~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 278 (902)
..++.+++|+.|+|++|++++. ..+..+++|+.|++++|.+++
T Consensus 144 --------~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 144 --------VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp --------GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred --------hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 2355556666666666666543 445566666666666666653
No 369
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=5.3e-19 Score=195.54 Aligned_cols=121 Identities=23% Similarity=0.191 Sum_probs=77.3
Q ss_pred CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCcccc-
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTI- 554 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~- 554 (902)
+..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 157 (361)
T 2xot_A 78 FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK 157 (361)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC
T ss_pred ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhc
Confidence 3344455555566666666666655555556666666666666666665555666666666666666666664333334
Q ss_pred --ccCCccceEEccCcccCCCcccccccccc--CCeEeCcCccccc
Q 046199 555 --GGLTNLQLLSLENNRLHGPIPESFGALTS--LESLDLSVNNLSG 596 (902)
Q Consensus 555 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 596 (902)
..+++|+.|+|++|+|++..+..|..++. |+.|+|++|.+.-
T Consensus 158 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 56788888888888888666667777776 4788888888763
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=6.8e-19 Score=176.80 Aligned_cols=153 Identities=20% Similarity=0.278 Sum_probs=94.2
Q ss_pred cCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchh
Q 046199 89 FSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQE 168 (902)
Q Consensus 89 ~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~ 168 (902)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..++.+++|++|++++|++++..|..
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~----------~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 107 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT----------NYNPISGLSNLERLRIMGKDVTSDKIPN 107 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS----------CCGGGTTCTTCCEEEEECTTCBGGGSCC
T ss_pred hhcCCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC----------cchhhhcCCCCCEEEeECCccCcccChh
Confidence 45556666666666665 333 1344555555555555443 2335666777777777777777666777
Q ss_pred hccccccceeecccCcCCCCCChhhhccCcccEEeeeeCC-CCccccccccccCCccccccccCCCccccCCCCCCEEEc
Q 046199 169 LGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNS-LTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGI 247 (902)
Q Consensus 169 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~L 247 (902)
++.+++|++|+|++|++++..|..++.+++|++|+|++|. ++. +| .+..+++|+.|++
T Consensus 108 l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~--------------------~~-~l~~l~~L~~L~l 166 (197)
T 4ezg_A 108 LSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD--------------------IM-PLKTLPELKSLNI 166 (197)
T ss_dssp CTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC--------------------CG-GGGGCSSCCEEEC
T ss_pred hcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc--------------------cH-hhcCCCCCCEEEC
Confidence 7777777777777777776666667777777777777776 442 12 4556666777777
Q ss_pred cCccccCcCCCcccCCCCCceEeccCcccc
Q 046199 248 DENHLVGDVPNTIFNMSTLKALSLLNNTLS 277 (902)
Q Consensus 248 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 277 (902)
++|++++ ++ .+..+++|+.|++++|++.
T Consensus 167 ~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 167 QFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 7777663 33 5666666666666666654
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=1.6e-19 Score=189.42 Aligned_cols=148 Identities=19% Similarity=0.221 Sum_probs=112.6
Q ss_pred HHHhhcccccccCeecccceeeEEEEEe-CCCcE--EEEEEeeeccch------------------------hhhhHHHH
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRF-LDGME--VAIKVFHLQFDG------------------------ALKSFDAE 772 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E 772 (902)
.+.....-|++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|
T Consensus 41 ~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 120 (258)
T 1zth_A 41 KLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKE 120 (258)
T ss_dssp HHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHH
T ss_pred HHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHH
Confidence 3333444578889999999999999998 67888 999987543111 11367899
Q ss_pred HHHHHhCCCCCc--cceeeeeecCCeeEEEEEccCC-C----ChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 046199 773 CEVLKSVRHRNL--VKIISSCSNGNFKALVLEYMAN-G----SLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSN 845 (902)
Q Consensus 773 ~~~l~~l~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~ 845 (902)
+++++.+.|+++ +.+++. +..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.
T Consensus 121 ~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~ 190 (258)
T 1zth_A 121 FRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EA 190 (258)
T ss_dssp HHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TS
T ss_pred HHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HC
Confidence 999999988764 444432 346899999942 3 67665432 2244678899999999999994 57
Q ss_pred CeEEcCCCCCCEEEcCCCcEEEEeecCceecCCC
Q 046199 846 PVVHCDIKPSNILLDDDMVAHLSDFGIAKLLNGE 879 (902)
Q Consensus 846 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 879 (902)
||+||||||+|||++. .++|+|||+|.....+
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 9999999999999998 9999999999876543
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.2e-19 Score=218.23 Aligned_cols=196 Identities=21% Similarity=0.163 Sum_probs=118.3
Q ss_pred CCCCeeeccccccccCCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhccCcccccC
Q 046199 68 SSLQTLDLSHNRFSGTIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGN 147 (902)
Q Consensus 68 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~ 147 (902)
+.++.|+|++|.+.+ +|. ..|+.++|+.|.+.+ ++++.|+++ ..|..+..
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~---------------~~~~~n~~~---------~~~~~~~~ 222 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE---------------DDDIENRMV---------MPKDSKYD 222 (727)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC---------------cccccccee---------cChhhhcc
Confidence 457788888888873 444 345666777776653 344455543 25777888
Q ss_pred cCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccc
Q 046199 148 LTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNL 227 (902)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~ 227 (902)
++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~----------------- 283 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT----------------- 283 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-----------------
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-----------------
Confidence 999999999999998 89999999999999999999999 89999999999999999999965
Q ss_pred cccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCC-cccceeeccCccCCCC
Q 046199 228 WQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGL-PNIERLNLGLNNLSGR 306 (902)
Q Consensus 228 ~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~~L~~L~Ls~N~l~~~ 306 (902)
.+|..|++|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+ ..+ ..+..|+|++|.+++.
T Consensus 284 ---~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 284 ---SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL---TEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp ---SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH---HHHHHHHHHHHHHHCCCCCC
T ss_pred ---ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH---hhcchhhhHHhhccCcccCc
Confidence 34588999999999999999997 788889999999999999999998877663 222 2233578888888877
Q ss_pred CCccccccccccEEEccCC
Q 046199 307 IPGFIFNASKLFLLELTGN 325 (902)
Q Consensus 307 ~~~~l~~l~~L~~L~Ls~N 325 (902)
+|. .|..|+++.|
T Consensus 357 ~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 357 LPH------ERRFIEINTD 369 (727)
T ss_dssp CCC------C---------
T ss_pred Ccc------ccceeEeecc
Confidence 775 3556667766
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=9.8e-19 Score=184.01 Aligned_cols=171 Identities=23% Similarity=0.311 Sum_probs=126.6
Q ss_pred CcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCcccc
Q 046199 147 NLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRN 226 (902)
Q Consensus 147 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~ 226 (902)
.+.+++.+++++|.++ .++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|+|++
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~--------------- 77 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD--------------- 77 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC---------------
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC---------------
Confidence 4667778888888887 455 5778888888888888887 556 57788888888888888663
Q ss_pred ccccCCCccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCC
Q 046199 227 LWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGR 306 (902)
Q Consensus 227 ~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~ 306 (902)
+|. ++.+++|+.|+|++|++++ +|.... ++|+.|+|++|++++. + .+..+++|++|++++|++++.
T Consensus 78 -----~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~-~----~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 78 -----LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT-D----SLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp -----CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS-G----GGTTCTTCCEEECTTSCCCBC
T ss_pred -----Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCCC-h----hhcCcccccEEECCCCcCCCC
Confidence 223 7778888888888888874 443332 7888888888888753 2 266778888888888888754
Q ss_pred CCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCC
Q 046199 307 IPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSS 354 (902)
Q Consensus 307 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 354 (902)
+ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.++..
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3 577788888888888888765 5677788888888888887765
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=5.8e-19 Score=176.39 Aligned_cols=131 Identities=25% Similarity=0.338 Sum_probs=78.4
Q ss_pred CeEeccCccccCCCCccccCCCcCceEecCCCCccCcccc-cccCCCCceEEEcCCCccCCCCccccccccccceeccCC
Q 046199 465 SELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPS-TFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSR 543 (902)
Q Consensus 465 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (902)
+.+++++|+++ .+|..+.. +|++|++++|+|+++.+. .|..+++|++|++++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777665 33443322 566666666666665543 356666666666666666665566666666666666666
Q ss_pred ccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccC
Q 046199 544 NYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVI 598 (902)
Q Consensus 544 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 598 (902)
|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666555555666666666666666666555556666666666666666665543
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=4.7e-18 Score=169.76 Aligned_cols=156 Identities=26% Similarity=0.331 Sum_probs=100.4
Q ss_pred ceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCcc-ccccccccceeccCCccccccCccccccCCccceEEccC
Q 046199 489 RNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPL-DIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLEN 567 (902)
Q Consensus 489 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 567 (902)
+.+++++|+++. +|..+.. ++++|++++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 566777777754 3443322 677777777777655443 366777777777777777766677777777777777777
Q ss_pred cccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCCCCCcccccccccccCCcccCCCCC
Q 046199 568 NRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIPSGGSFANFSAQSFMGNDLLCGSPH 647 (902)
Q Consensus 568 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 647 (902)
|+|++..|..|..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+|+|.++......++....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 77776666667777777777777777777667777777777777777777776665422222233334445555565553
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=5.7e-18 Score=170.04 Aligned_cols=153 Identities=18% Similarity=0.257 Sum_probs=96.6
Q ss_pred ccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccccccCCccccccccCCCccccCCCCCCEEEccC
Q 046199 170 GNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNNHFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDE 249 (902)
Q Consensus 170 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~ 249 (902)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~---------------------~~~l~~l~~L~~L~l~~ 97 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN---------------------YNPISGLSNLERLRIMG 97 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC---------------------CGGGTTCTTCCEEEEEC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc---------------------chhhhcCCCCCEEEeEC
Confidence 56667777777777776 555 46667777777777775442 13556667777777777
Q ss_pred ccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCcc-CCCCCCccccccccccEEEccCCccc
Q 046199 250 NHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNN-LSGRIPGFIFNASKLFLLELTGNSFS 328 (902)
Q Consensus 250 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~Ls~N~l~ 328 (902)
|++++..|..+..+++|++|++++|++++..|.. +..+++|++|++++|. ++ .+| .+..+++|++|++++|+++
T Consensus 98 n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~---l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 98 KDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTK---INTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp TTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHH---HTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred CccCcccChhhcCCCCCCEEEecCCccCcHhHHH---HhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 7776666666777777777777777776544443 5566666666666666 44 333 4566666677777776666
Q ss_pred CcccccccccccccEEecccccCC
Q 046199 329 GFIPDTLVNLRNLEHLGLGYNYLT 352 (902)
Q Consensus 329 ~~~p~~l~~l~~L~~L~Ls~N~l~ 352 (902)
+. + .+..+++|++|++++|++.
T Consensus 173 ~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 173 DY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-T-TGGGCSSCCEEEECBC---
T ss_pred Ch-H-HhccCCCCCEEEeeCcccC
Confidence 43 2 5666666666666666654
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.1e-17 Score=180.30 Aligned_cols=87 Identities=13% Similarity=0.044 Sum_probs=51.6
Q ss_pred CCCCccccCCCcCceEecCCCCccCcccccccCCCCce-EEEcCCCccCCCCccccccccccceeccCCccccccCcccc
Q 046199 476 GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNIL-SFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTI 554 (902)
Q Consensus 476 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 554 (902)
.+.+.+|.++++|+.++|.+| ++.+.+.+|.++++|+ .+++.+ +++.+.+..|.++++|+.++++.|+++...+.+|
T Consensus 240 ~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF 317 (329)
T 3sb4_A 240 TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELF 317 (329)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTT
T ss_pred eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhh
Confidence 344445555666666666555 5555555566666665 666655 4554445566666666666666666665555666
Q ss_pred ccCCccceEE
Q 046199 555 GGLTNLQLLS 564 (902)
Q Consensus 555 ~~l~~L~~L~ 564 (902)
.++++|+.++
T Consensus 318 ~~~~~L~~ly 327 (329)
T 3sb4_A 318 GNGVPSKLIY 327 (329)
T ss_dssp CTTCCCCEEE
T ss_pred cCCcchhhhc
Confidence 6666666665
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=2e-17 Score=165.11 Aligned_cols=131 Identities=24% Similarity=0.310 Sum_probs=102.4
Q ss_pred ceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCc
Q 046199 489 RNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENN 568 (902)
Q Consensus 489 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 568 (902)
+.+++++|+++.+ |..+ .++|++|++++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~i-p~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSC-CSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcC-CCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4566777776653 3333 246777777777777 46677777888888888888888777778888888888888888
Q ss_pred ccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 569 RLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 569 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 8888778888888889999999998887666678888889999999999987665
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=8.1e-18 Score=183.56 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=61.3
Q ss_pred CCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccc-eEEccCcccCCCccccccccccCCeE
Q 046199 509 LNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQ-LLSLENNRLHGPIPESFGALTSLESL 587 (902)
Q Consensus 509 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 587 (902)
+++|+.|++++|+++.+.+..|.++.+|++++|++| ++...+.+|.++.+|+ .+++.+ +++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 455555555555555444455555555555666555 5545555666666666 666666 5554455666666666666
Q ss_pred eCcCccccccCCccccccccccccc
Q 046199 588 DLSVNNLSGVIPISLEKLVYLKDLN 612 (902)
Q Consensus 588 ~Ls~N~l~~~~p~~l~~l~~L~~L~ 612 (902)
++++|+++.+.+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 6666666655555666666666654
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=3.2e-17 Score=177.89 Aligned_cols=148 Identities=14% Similarity=0.135 Sum_probs=106.6
Q ss_pred HHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccc--------------hhhh--------hHHHHHHHHH
Q 046199 720 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--------------GALK--------SFDAECEVLK 777 (902)
Q Consensus 720 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~ 777 (902)
.+.....-|++.+.||+|++|.||+|.+.+|++||||+++.... .... ...+|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33444445999999999999999999998899999998753210 0001 1235666677
Q ss_pred hCCCCCccceeeeeecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCE
Q 046199 778 SVRHRNLVKIISSCSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNI 857 (902)
Q Consensus 778 ~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NI 857 (902)
++.+..+....-+... ..++||||++|+++.++.. . .....++.|++.+|.|+| +.|||||||||.||
T Consensus 169 rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NI 236 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNI 236 (397)
T ss_dssp HHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred HHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHE
Confidence 7655444322222222 2379999999988866431 1 234568899999999999 99999999999999
Q ss_pred EEcCCC----------cEEEEeecCceecCCC
Q 046199 858 LLDDDM----------VAHLSDFGIAKLLNGE 879 (902)
Q Consensus 858 ll~~~~----------~~kL~DFG~a~~~~~~ 879 (902)
|+++++ .+.|+||+-+.....+
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp 268 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVSMDHP 268 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred EEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence 998876 3899999988765543
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.3e-16 Score=155.52 Aligned_cols=132 Identities=20% Similarity=0.194 Sum_probs=83.3
Q ss_pred CcCceEecCCCCcc-CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEE
Q 046199 486 NSLRNLSLGSNELS-SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLS 564 (902)
Q Consensus 486 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 564 (902)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34555555555554 33444455555555555555555543 4555566666666666666655666666677777777
Q ss_pred ccCcccCCCc-cccccccccCCeEeCcCccccccCC---cccccccccccccccCCcce
Q 046199 565 LENNRLHGPI-PESFGALTSLESLDLSVNNLSGVIP---ISLEKLVYLKDLNLSFNRLE 619 (902)
Q Consensus 565 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~l~~N~l~ 619 (902)
|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777532 2567777777777777777775544 36677777777777777766
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2e-16 Score=154.34 Aligned_cols=137 Identities=26% Similarity=0.222 Sum_probs=118.4
Q ss_pred CCCCeEeccCcccc-CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceec
Q 046199 462 CQLSELHVDHNKLS-GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEIN 540 (902)
Q Consensus 462 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 540 (902)
.+|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..|..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 47888888888887 67788889999999999999999886 7888999999999999999987888888899999999
Q ss_pred cCCccccccC-ccccccCCccceEEccCcccCCCcc---ccccccccCCeEeCcCccccccCCcc
Q 046199 541 LSRNYLTGDI-PTTIGGLTNLQLLSLENNRLHGPIP---ESFGALTSLESLDLSVNNLSGVIPIS 601 (902)
Q Consensus 541 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~ 601 (902)
+++|++++.. +..+..+++|+.|++++|++++..+ ..|..+++|+.|++++|.+. .+|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999998642 2789999999999999999996555 48899999999999999988 45543
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.8e-16 Score=151.31 Aligned_cols=128 Identities=17% Similarity=0.193 Sum_probs=90.4
Q ss_pred CcCceEecCCCCcc-CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEE
Q 046199 486 NSLRNLSLGSNELS-SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLS 564 (902)
Q Consensus 486 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 564 (902)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 45566666666666666666666654 5566677777777777777766777777778888888
Q ss_pred ccCcccCCC-ccccccccccCCeEeCcCccccccCC---cccccccccccccccC
Q 046199 565 LENNRLHGP-IPESFGALTSLESLDLSVNNLSGVIP---ISLEKLVYLKDLNLSF 615 (902)
Q Consensus 565 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~l~~ 615 (902)
+++|++++. .|..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888887753 34677788888888888888876555 4677788888887764
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=4.1e-16 Score=153.50 Aligned_cols=132 Identities=23% Similarity=0.305 Sum_probs=83.3
Q ss_pred ceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCc
Q 046199 489 RNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENN 568 (902)
Q Consensus 489 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 568 (902)
+.+++++|+++.+ |..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4455555555443 2222 245556666666665544455556666666666666666555555667777777777777
Q ss_pred ccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 569 RLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 569 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|+++|.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7776666666777777777777777775555556677777777777777777666
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.2e-16 Score=149.45 Aligned_cols=128 Identities=23% Similarity=0.265 Sum_probs=112.7
Q ss_pred CCCCeEeccCcccc-CCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceec
Q 046199 462 CQLSELHVDHNKLS-GPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEIN 540 (902)
Q Consensus 462 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 540 (902)
.+|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46788888888887 67788889999999999999999986 7888999999999999999987888888899999999
Q ss_pred cCCcccccc-CccccccCCccceEEccCcccCCCcc---ccccccccCCeEeCcC
Q 046199 541 LSRNYLTGD-IPTTIGGLTNLQLLSLENNRLHGPIP---ESFGALTSLESLDLSV 591 (902)
Q Consensus 541 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 591 (902)
+++|++++. .+..++.+++|++|++++|++++..+ ..++.+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999964 35889999999999999999997665 5789999999999974
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=1.7e-17 Score=166.61 Aligned_cols=151 Identities=24% Similarity=0.314 Sum_probs=97.0
Q ss_pred cCCCCCCCeeeccccccccCCCc------cccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcch
Q 046199 64 LGNLSSLQTLDLSHNRFSGTIPS------SIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANI 137 (902)
Q Consensus 64 l~~l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~ 137 (902)
+.....++.++++.+.++|.+|. .++.+++|++|+|++|.+++
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~------------------------------- 62 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK------------------------------- 62 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-------------------------------
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-------------------------------
Confidence 44566778888888888877776 67777777777777777764
Q ss_pred hccCcccccCcCccceeeecccccCCCCchhhccccccceeecccCcCCCCCChhhhccCcccEEeeeeCCCCccccccc
Q 046199 138 FRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLAELEWLSLPRSFLTGTIPSSIFNLSSLLELDFSNNSLTGFYMTNN 217 (902)
Q Consensus 138 ~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 217 (902)
+| .++.+++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +| .+.++++|++|+|++|.++.+
T Consensus 63 ---l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~----- 130 (198)
T 1ds9_A 63 ---IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNW----- 130 (198)
T ss_dssp ---CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCH-----
T ss_pred ---cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCch-----
Confidence 44 4555666666666666666 566666666667777777776664 44 466666777777777765531
Q ss_pred cccCCccccccccCCCccccCCCCCCEEEccCccccCcCCCc----------ccCCCCCceEe
Q 046199 218 HFTGSIPRNLWQCEIPHEIGNLPNLEVLGIDENHLVGDVPNT----------IFNMSTLKALS 270 (902)
Q Consensus 218 ~~~g~ip~~~~~~~lp~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~ 270 (902)
| ....+..+++|++|++++|++++..|.. +..+++|+.||
T Consensus 131 ------~-------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 131 ------G-------EIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp ------H-------HHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred ------h-------HHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 1 0024566666777777777666554442 55556666555
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=2.3e-15 Score=148.14 Aligned_cols=133 Identities=24% Similarity=0.270 Sum_probs=104.1
Q ss_pred CCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCC
Q 046199 464 LSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSR 543 (902)
Q Consensus 464 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (902)
.+.+++++|+++.. |..+ .++|+.|++++|+++++.+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 45566666666543 3322 25778888888888877777777888888888888888876666678888888888888
Q ss_pred ccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCC
Q 046199 544 NYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIP 599 (902)
Q Consensus 544 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 599 (902)
|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887777778899999999999999997767778889999999999999987654
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3e-15 Score=149.30 Aligned_cols=127 Identities=25% Similarity=0.355 Sum_probs=92.5
Q ss_pred eEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCcc
Q 046199 466 ELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNY 545 (902)
Q Consensus 466 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 545 (902)
.+++++|+++. +|..+. ++|+.|++++|+|+. +|..|.++++|++|++++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 44444444442 333221 356677777777764 45667777777777777777776666677777777788888888
Q ss_pred ccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccc
Q 046199 546 LTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSG 596 (902)
Q Consensus 546 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 596 (902)
|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 887777788888999999999999987667778889999999999998875
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=3e-15 Score=147.12 Aligned_cols=135 Identities=19% Similarity=0.161 Sum_probs=108.2
Q ss_pred cccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCcc
Q 046199 481 CFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNL 560 (902)
Q Consensus 481 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 560 (902)
.+.++++|+.|++++|+++.+ |......++|++|++++|.+++. ..+..+++|++|++++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 456777888888888888864 44333334888888888888864 678888889999999999986655666899999
Q ss_pred ceEEccCcccCCCccc--cccccccCCeEeCcCccccccCCcc----cccccccccccccCCccee
Q 046199 561 QLLSLENNRLHGPIPE--SFGALTSLESLDLSVNNLSGVIPIS----LEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 561 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~l~~N~l~~ 620 (902)
++|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|....
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999999996 5665 7889999999999999998 45654 8889999999999998764
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=2.7e-14 Score=159.07 Aligned_cols=130 Identities=9% Similarity=0.139 Sum_probs=71.1
Q ss_pred CcCceEecCCCCccCcccccccCCCCceEEEcCCCccC-----CCCccccccccccceeccCCccccccCccccccCCcc
Q 046199 486 NSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLN-----GSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNL 560 (902)
Q Consensus 486 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 560 (902)
.+|+.+.+ .|.++.+.+.+|.++++|+.+++.+|.+. ...+..|.++++|+.+++. |.++.....+|.++++|
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSC
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCc
Confidence 34444444 23344444445555555555555444433 2334455556666666665 33554555666666666
Q ss_pred ceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccccc-ccccccccCCcce
Q 046199 561 QLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLV-YLKDLNLSFNRLE 619 (902)
Q Consensus 561 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~ 619 (902)
+.++|.+| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66666444 554445666666 677777766666655555565553 4556655555433
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=3.7e-14 Score=157.88 Aligned_cols=174 Identities=10% Similarity=0.133 Sum_probs=113.3
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEeccCcc
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVDHNK 473 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~~N~ 473 (902)
+|+.+.|.++ ++.+...+|.++++|+.+++.+| ++.+...+|.+ . +|+.+.+ .+.
T Consensus 204 ~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~---------------------~L~~i~l-p~~ 258 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-S---------------------GITTVKL-PNG 258 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-C---------------------CCSEEEE-ETT
T ss_pred ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-C---------------------CccEEEe-CCC
Confidence 5555555533 55455556666666666666553 33233334433 3 3344444 233
Q ss_pred ccCCCCccccCCCcCceEecCCCCcc-----CcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccc
Q 046199 474 LSGPIPACFGNLNSLRNLSLGSNELS-----SFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTG 548 (902)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 548 (902)
++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++. +.++.+....|.++++|+.++|..| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 44455567777777777777776654 4556677777778887777 3466566677777788888888554 665
Q ss_pred cCccccccCCccceEEccCcccCCCccccccccc-cCCeEeCcCcccc
Q 046199 549 DIPTTIGGLTNLQLLSLENNRLHGPIPESFGALT-SLESLDLSVNNLS 595 (902)
Q Consensus 549 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 595 (902)
..+.+|.++ +|+.+++++|.+....+..|.+++ +++.|.+..|.+.
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 667788888 888888888888766677787774 6788888777654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=8.1e-15 Score=144.01 Aligned_cols=134 Identities=23% Similarity=0.289 Sum_probs=110.8
Q ss_pred cccCCCCCCCeeeccccccccCCCccccCCC-cceEEEecCccccCCCCcccccCCCcccEEEcccCcccCcCCcchhcc
Q 046199 62 SQLGNLSSLQTLDLSHNRFSGTIPSSIFSIS-TLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSLSGELPANIFRA 140 (902)
Q Consensus 62 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ 140 (902)
+.+.++++|++|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..++++++|+.||+++|.+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~---~~l~~l~~L~~L~Ls~N~l~~--------- 78 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL---DGFPLLRRLKTLLVNNNRICR--------- 78 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE---CCCCCCSSCCEEECCSSCCCE---------
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc---cccccCCCCCEEECCCCcccc---------
Confidence 34567788999999999988 6665 55554 899999999998864 346788899999999998873
Q ss_pred Ccccc-cCcCccceeeecccccCCCCch--hhccccccceeecccCcCCCCCChh----hhccCcccEEeeeeCCCCc
Q 046199 141 IPKDI-GNLTKLKELYLGYNKLQGEIPQ--ELGNLAELEWLSLPRSFLTGTIPSS----IFNLSSLLELDFSNNSLTG 211 (902)
Q Consensus 141 ip~~~-~~l~~L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 211 (902)
+|..+ +.+++|++|+|++|+++ .+|. .++.+++|++|++++|.++ .+|.. +..+++|++||+++|.++.
T Consensus 79 ~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 79 IGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred cCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 55444 78899999999999997 6787 8899999999999999998 66764 8999999999999998654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=8e-17 Score=161.73 Aligned_cols=133 Identities=23% Similarity=0.302 Sum_probs=104.1
Q ss_pred ccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCc
Q 046199 480 ACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTN 559 (902)
Q Consensus 480 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 559 (902)
..|..+++|++|++++|++++ +| .+..+++|++|++++|.++ .+|..+..+++|++|++++|++++ +| .+..+++
T Consensus 42 ~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~ 116 (198)
T 1ds9_A 42 ATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHH
T ss_pred HHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCC
Confidence 378888888888888888887 45 7788888888888888888 467777777888888888888885 44 6888888
Q ss_pred cceEEccCcccCCCcc-ccccccccCCeEeCcCccccccCCcc----------cccccccccccccCCcce
Q 046199 560 LQLLSLENNRLHGPIP-ESFGALTSLESLDLSVNNLSGVIPIS----------LEKLVYLKDLNLSFNRLE 619 (902)
Q Consensus 560 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------l~~l~~L~~L~l~~N~l~ 619 (902)
|+.|++++|++++..+ ..+..+++|+.|++++|++++.+|.. +..+++|+.|| +|+++
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 8888888888885332 46788888888888888888776653 77788888776 66665
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=1.7e-14 Score=140.56 Aligned_cols=108 Identities=28% Similarity=0.291 Sum_probs=68.1
Q ss_pred eEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCc
Q 046199 513 LSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVN 592 (902)
Q Consensus 513 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 592 (902)
+.+++++|+++. +|..+. +.|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345555555543 343332 45566666666666556666666677777777777776655566666777777777777
Q ss_pred cccccCCcccccccccccccccCCcceecCC
Q 046199 593 NLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 593 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
+|++..+..|..+++|+.|+|++|+|++.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776555566677777777777777776655
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=3.7e-13 Score=150.46 Aligned_cols=237 Identities=13% Similarity=0.073 Sum_probs=129.7
Q ss_pred cccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccc
Q 046199 310 FIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIG 389 (902)
Q Consensus 310 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 389 (902)
.|.++++|+.+.+.++.. ......|.++.+|+.+++..| ++.... ..+.++..|+.+.+..+... +.+...
T Consensus 157 aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~-----~~F~~~~~L~~i~~~~~~~~--i~~~~~ 227 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRD-----YCFAECILLENMEFPNSLYY--LGDFAL 227 (394)
T ss_dssp TTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECT-----TTTTTCTTCCBCCCCTTCCE--ECTTTT
T ss_pred hhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCc-----hhhccccccceeecCCCceE--eehhhc
Confidence 444555555555544322 233445555566666655544 222222 34555555555555544322 222223
Q ss_pred cccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEec
Q 046199 390 NLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHV 469 (902)
Q Consensus 390 ~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L 469 (902)
... .|+.+.+... ++.+....|..+..|+.+.+..+... .....|..+..++.+....+.+..
T Consensus 228 ~~~-~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~-------------- 290 (394)
T 4fs7_A 228 SKT-GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE-------------- 290 (394)
T ss_dssp TTC-CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT--------------
T ss_pred ccC-CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc--------------
Confidence 333 6667766543 33355567777788888887776554 555666666666666655444332
Q ss_pred cCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCcccccc
Q 046199 470 DHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGD 549 (902)
Q Consensus 470 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 549 (902)
..|..+.+|+.+.+.++ ++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+++..| ++..
T Consensus 291 ----------~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I 357 (394)
T 4fs7_A 291 ----------KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKI 357 (394)
T ss_dssp ----------TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEE
T ss_pred ----------ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEe
Confidence 24555555555555443 44444555666666666666533 44344555666666666666655 5545
Q ss_pred CccccccCCccceEEccCcccCCCccccccccccCCeE
Q 046199 550 IPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESL 587 (902)
Q Consensus 550 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 587 (902)
...+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 358 ~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 358 GANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred hHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 5667777777777777654 33 234566666666553
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=7.8e-13 Score=147.80 Aligned_cols=327 Identities=13% Similarity=0.090 Sum_probs=191.6
Q ss_pred ccccCCCCCCEEEccCccccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCccccc
Q 046199 234 HEIGNLPNLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGFIFN 313 (902)
Q Consensus 234 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~ 313 (902)
.+|.++.+|+.+.|.. .++..-..+|.++++|+.+++.++ ++ .++.. +|.+++.|+.+.+..+ +.......|..
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~--aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRC--TFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTT--TTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-Eccch--hhcccccchhhcccCc-eeeecceeeec
Confidence 4677788888888874 466555667888888998888765 43 23332 2777778887776654 33344445555
Q ss_pred cccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCcccccccc
Q 046199 314 ASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGNLPI 393 (902)
Q Consensus 314 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 393 (902)
...+......... .....+|.++++|+.+.+..+. ..... ..+.++.+|+.+.+..+ +
T Consensus 139 ~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~-----~~F~~c~~L~~i~l~~~-~------------- 196 (394)
T 4fs7_A 139 CDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHN-----GLFSGCGKLKSIKLPRN-L------------- 196 (394)
T ss_dssp CCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECT-----TTTTTCTTCCBCCCCTT-C-------------
T ss_pred ccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceecc-----ccccCCCCceEEEcCCC-c-------------
Confidence 5443333322222 2334566677777777765442 21222 34555555555555443 2
Q ss_pred cccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeeccccc--ccCCCCCcCCCCCeEeccC
Q 046199 394 TLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNK--LEGPIPDDLCQLSELHVDH 471 (902)
Q Consensus 394 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~l~~L~~L~L~~ 471 (902)
+.+...+|.++..|+.+.+..+... +...+.....|+.+.+..+. +..........++.+.+..
T Consensus 197 ------------~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 197 ------------KIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQN 262 (394)
T ss_dssp ------------CEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECC
T ss_pred ------------eEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCceecccccccccccceeEEcCC
Confidence 2233344444455554444443322 11222223344444443221 1111112222455555544
Q ss_pred ccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCc
Q 046199 472 NKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIP 551 (902)
Q Consensus 472 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 551 (902)
+... +....|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++.+....|.++.+|+.+++.++ ++....
T Consensus 263 ~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~ 336 (394)
T 4fs7_A 263 NKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGK 336 (394)
T ss_dssp TTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred Ccce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhH
Confidence 4332 5556777888888887776643 3457778888888888765 55455667888888888888654 665667
Q ss_pred cccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccc
Q 046199 552 TTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDL 611 (902)
Q Consensus 552 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 611 (902)
.+|.++.+|+.+++..| ++.+...+|.++++|+.+++..+ ++ .+...|.+.++|+.+
T Consensus 337 ~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 337 RSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 78888888888888776 66555678888888888888654 33 345567777777653
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=4.8e-14 Score=137.90 Aligned_cols=107 Identities=27% Similarity=0.284 Sum_probs=59.2
Q ss_pred EEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCcc
Q 046199 514 SFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNN 593 (902)
Q Consensus 514 ~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 593 (902)
.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4444444443 2333332 445555555555555555556666666666666666665444455566666666666666
Q ss_pred ccccCCcccccccccccccccCCcceecCC
Q 046199 594 LSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 594 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
|++..+..|..+++|+.|+|++|+|.+.++
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 665444446666666666666666665443
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=3e-13 Score=131.74 Aligned_cols=108 Identities=21% Similarity=0.214 Sum_probs=83.6
Q ss_pred CceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccC
Q 046199 488 LRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLEN 567 (902)
Q Consensus 488 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 567 (902)
.+.+++++|+++. +|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566777777765 34433 26677777777777777777777788888888888888877777788889999999999
Q ss_pred cccCCCccccccccccCCeEeCcCccccccC
Q 046199 568 NRLHGPIPESFGALTSLESLDLSVNNLSGVI 598 (902)
Q Consensus 568 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 598 (902)
|+|++..+..|..+++|+.|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9998777778889999999999999888543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=5.3e-13 Score=130.44 Aligned_cols=105 Identities=20% Similarity=0.196 Sum_probs=78.0
Q ss_pred ceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCccccccCCccceEEccCc
Q 046199 489 RNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENN 568 (902)
Q Consensus 489 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 568 (902)
+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 556666666654 344332 56777777777777666777777777777777777777666666788888888888888
Q ss_pred ccCCCccccccccccCCeEeCcCccccc
Q 046199 569 RLHGPIPESFGALTSLESLDLSVNNLSG 596 (902)
Q Consensus 569 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 596 (902)
+|++..+..|..+++|+.|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8887666678888889999999998884
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.34 E-value=2.9e-12 Score=134.63 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=115.3
Q ss_pred cccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEEEc
Q 046199 725 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 725 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 803 (902)
.+.|++....+.|+.+.||++.. +++.+++|+.+.........+.+|+++++.+. +..++++++++...+..|+||||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred hccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 35788888899999999999975 46899999987543233467899999999984 67888999999988999999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----------------------------------------
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG----------------------------------------- 842 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~----------------------------------------- 842 (902)
++|.++.+... +......++.++++++..||..
T Consensus 92 i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 92 ADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp CSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred cCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 99999887531 1122347889999999999941
Q ss_pred ---------------CCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 843 ---------------YSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 843 ---------------~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
....++|+|++|.||++++++.+.|+||+.+..
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 015689999999999998765667999998864
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=9.8e-13 Score=144.43 Aligned_cols=132 Identities=17% Similarity=0.086 Sum_probs=82.5
Q ss_pred eEecCCC-CccCcccccccCCCCceEEEcCC-CccCCCCccccccccccceeccCCccccccCccccccCCccceEEccC
Q 046199 490 NLSLGSN-ELSSFIPSTFWNLNNILSFDFSS-NSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLEN 567 (902)
Q Consensus 490 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 567 (902)
.++.+++ +|++ +|. +..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4567776 7776 455 77777777777775 777766666677777777777777777776677777777777777777
Q ss_pred cccCCCccccccccccCCeEeCcCccccccCC-cccccccccccccccCCcceecCCC
Q 046199 568 NRLHGPIPESFGALTSLESLDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLEGEIPS 624 (902)
Q Consensus 568 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~ 624 (902)
|+|++..|..|..++ |+.|+|++|++...-. ..|..+.......+..+.+++..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777765555555555 7777777777664322 1222222223333444555555554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=4.8e-12 Score=138.89 Aligned_cols=107 Identities=22% Similarity=0.274 Sum_probs=83.8
Q ss_pred EEEcCCC-ccCCCCccccccccccceeccCC-ccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcC
Q 046199 514 SFDFSSN-SLNGSLPLDIGNMKVVVEINLSR-NYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSV 591 (902)
Q Consensus 514 ~L~ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 591 (902)
.++++++ +|++ +|. +..+++|++|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|+.|++|+.|||++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 7874 666 88888888888885 888877777888888888888888888887778888888888888888
Q ss_pred ccccccCCcccccccccccccccCCcceecCC
Q 046199 592 NNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 592 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
|+|++..+..+..++ |+.|+|++|+|.+.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 888866555666655 8888888888887654
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=2.4e-10 Score=127.50 Aligned_cols=328 Identities=11% Similarity=0.138 Sum_probs=176.8
Q ss_pred cccCCC-CCCEEEccCccccCcCCCcccCCCCCceEeccCcc---cccCCCcCCcccCCCcccceeeccCccCCCCCCcc
Q 046199 235 EIGNLP-NLEVLGIDENHLVGDVPNTIFNMSTLKALSLLNNT---LSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGF 310 (902)
Q Consensus 235 ~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 310 (902)
+|.+.. .|+.+.+-.+ ++.+-..+|.++++|+.+.+++|. ++ .++.. +|..+.+|+.+.+..+ ++......
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~--aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQ--AFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTT--TTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-Eechh--hchhcccceeeccCCc-cceehhhh
Confidence 355543 4666666543 544445566666667666666553 22 12211 2455555555554433 22233344
Q ss_pred ccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccc
Q 046199 311 IFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGN 390 (902)
Q Consensus 311 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 390 (902)
|..+.+|+.+.+..+- .......|....+|+.+.+ .++ +..+-...|.
T Consensus 133 F~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~-----------------------------~~~-~~~I~~~aF~- 180 (394)
T 4gt6_A 133 FHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTL-----------------------------PDS-VTAIEERAFT- 180 (394)
T ss_dssp TTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEEC-----------------------------CTT-CCEECTTTTT-
T ss_pred hhhhccccccccccee-eeecccceecccccccccc-----------------------------cce-eeEecccccc-
Confidence 4445555555554322 2123333444444444443 322 1111122222
Q ss_pred ccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCccc-ccccccCeeecccccccCCCCCcCCCCCeEec
Q 046199 391 LPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITV-GRLNTLQGLGLENNKLEGPIPDDLCQLSELHV 469 (902)
Q Consensus 391 l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L 469 (902)
.. .|+.+.+..+-.. ....+|.++..++......+.... ....+ ........-... .+ ....+..+.+
T Consensus 181 ~~-~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~i 249 (394)
T 4gt6_A 181 GT-ALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIR-------YP-SQREDPAFKI 249 (394)
T ss_dssp TC-CCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEE-------CC-TTCCCSEEEC
T ss_pred cc-ceeEEEECCcccc-cccchhhhccccceeccccccccc-ccceeecccccccccccc-------cc-cccccceEEc
Confidence 22 5666666544333 555667777777777666555442 11111 111100000000 00 0012333333
Q ss_pred cCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCcccccc
Q 046199 470 DHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGD 549 (902)
Q Consensus 470 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 549 (902)
. +.+..+...+|.++..|+.+.+.++.. .+...+|.++++|+.+.+. +.++......|.++.+|+.+++..+ ++..
T Consensus 250 p-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I 325 (394)
T 4gt6_A 250 P-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQI 325 (394)
T ss_dssp C-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEE
T ss_pred C-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEe
Confidence 2 234445566788888888888876543 4566788888889888886 4455556677888888888888765 6656
Q ss_pred CccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcc
Q 046199 550 IPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 618 (902)
Q Consensus 550 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 618 (902)
...+|.++.+|+.+.+..+ ++.+-..+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 326 ~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 326 LDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred hHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 6778888899999988655 665567788889999999998876542 4566677788877766644
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=1.8e-13 Score=150.85 Aligned_cols=158 Identities=20% Similarity=0.220 Sum_probs=98.3
Q ss_pred CCCeEeccCccccCCCCccccC-----CCcCceEecCCCCccCccccccc-CCCCceEEEcCCCccCCCCcccc-----c
Q 046199 463 QLSELHVDHNKLSGPIPACFGN-----LNSLRNLSLGSNELSSFIPSTFW-NLNNILSFDFSSNSLNGSLPLDI-----G 531 (902)
Q Consensus 463 ~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~~~~~~~-----~ 531 (902)
.|+.|+|++|.++......+.. .++|+.|+|++|.++......+. .+.+|+.|+|++|.++......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 4555555555554332222222 25677777777776543333332 34567777777777764333333 2
Q ss_pred cccccceeccCCcccccc----CccccccCCccceEEccCcccCCC----ccccccccccCCeEeCcCcccccc----CC
Q 046199 532 NMKVVVEINLSRNYLTGD----IPTTIGGLTNLQLLSLENNRLHGP----IPESFGALTSLESLDLSVNNLSGV----IP 599 (902)
Q Consensus 532 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 599 (902)
..+.|++|+|++|.|+.. ++..+...++|++|+|++|+|++. ++..+...++|+.|||++|.|+.. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 346677888888877642 344456678888888888887643 245566777888888888888753 33
Q ss_pred cccccccccccccccCCccee
Q 046199 600 ISLEKLVYLKDLNLSFNRLEG 620 (902)
Q Consensus 600 ~~l~~l~~L~~L~l~~N~l~~ 620 (902)
..+...++|+.|||++|+++.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHhCCCCCEEeccCCCCCH
Confidence 344456788888888888764
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.2e-13 Score=152.29 Aligned_cols=110 Identities=20% Similarity=0.168 Sum_probs=59.7
Q ss_pred CCceEEEcCCCccCCC----CccccccccccceeccCCcccccc----CccccccCCccceEEccCcccCCC----cccc
Q 046199 510 NNILSFDFSSNSLNGS----LPLDIGNMKVVVEINLSRNYLTGD----IPTTIGGLTNLQLLSLENNRLHGP----IPES 577 (902)
Q Consensus 510 ~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 577 (902)
++|++|+|++|.|+.. ++..+..+++|++|+|++|+|++. ++..+...++|+.|+|++|.|++. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 3444444444444321 222223445555555555555532 245566677788888888888743 2334
Q ss_pred ccccccCCeEeCcCccccccCCcccccccc-----ccccc--ccCCcce
Q 046199 578 FGALTSLESLDLSVNNLSGVIPISLEKLVY-----LKDLN--LSFNRLE 619 (902)
Q Consensus 578 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-----L~~L~--l~~N~l~ 619 (902)
+...++|++|||++|.|+..-...+..+.. |+.+. +.+|.++
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 445678888888888887655555544321 55555 5555554
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.22 E-value=5.1e-10 Score=124.89 Aligned_cols=307 Identities=10% Similarity=0.125 Sum_probs=175.8
Q ss_pred ccccCCCCCCEEEccCcc---ccCcCCCcccCCCCCceEeccCcccccCCCcCCcccCCCcccceeeccCccCCCCCCcc
Q 046199 234 HEIGNLPNLEVLGIDENH---LVGDVPNTIFNMSTLKALSLLNNTLSGSLPSSSKNLIGLPNIERLNLGLNNLSGRIPGF 310 (902)
Q Consensus 234 ~~l~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 310 (902)
.+|.++++|+.+.++.|. ++..-..+|..+.+|+.+.+.++ ++ .++.. +|..+.+|+.+.+..+ +.......
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I~~~--aF~~c~~L~~i~lp~~-~~~I~~~~ 155 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EIDSE--AFHHCEELDTVTIPEG-VTSVADGM 155 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EECTT--TTTTCTTCCEEECCTT-CCEECTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-eehhh--hhhhhcccccccccce-eeeecccc
Confidence 468899999999999875 66455678889999999998766 33 23332 3788999999999754 44466677
Q ss_pred ccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccCCCCCceeeeccCCCCcccCccccc
Q 046199 311 IFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLANSSSSKYIVLAENPLNGVLPSSIGN 390 (902)
Q Consensus 311 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 390 (902)
|..+.+|+.+.+..+ +..+...+|.+ .+|+.+.+..+-.. ... ..+.++.+++......+..... ...+..
T Consensus 156 F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~-----~af~~c~~l~~~~~~~~~~~~~-~~~~~~ 226 (394)
T 4gt6_A 156 FSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGT-----NAFSECFALSTITSDSESYPAI-DNVLYE 226 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECT-----TTTTTCTTCCEEEECCSSSCBS-SSCEEE
T ss_pred eecccccccccccce-eeEeccccccc-cceeEEEECCcccc-ccc-----chhhhccccceecccccccccc-cceeec
Confidence 889999999999876 44344555654 67888888654322 122 4566677777766655544311 111111
Q ss_pred ccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCeeecccccccCCCCCcCCCCCeEecc
Q 046199 391 LPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGLGLENNKLEGPIPDDLCQLSELHVD 470 (902)
Q Consensus 391 l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~L~ 470 (902)
. +.........+.....+..+.+.+ .++..-..+|..+..|+.+.+.++..+
T Consensus 227 ~-----------~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~---------------- 278 (394)
T 4gt6_A 227 K-----------SANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS---------------- 278 (394)
T ss_dssp E-----------CTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE----------------
T ss_pred c-----------cccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce----------------
Confidence 0 000000000111222333333322 233233445555555555554433221
Q ss_pred CccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccC
Q 046199 471 HNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDI 550 (902)
Q Consensus 471 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 550 (902)
+...+|.++++|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+....|.++.+|+.+.+..+ ++..-
T Consensus 279 ------I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 279 ------IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp ------ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCC
T ss_pred ------ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEh
Confidence 334456666666666664 3455555556666666666666654 44344556666777777777544 55455
Q ss_pred ccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccc
Q 046199 551 PTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNL 594 (902)
Q Consensus 551 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 594 (902)
..+|.++++|+.+++.+|.... ..|....+|+.+.+..|.+
T Consensus 350 ~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 6677777777777777765431 3556667777777766654
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=4.1e-11 Score=125.61 Aligned_cols=139 Identities=16% Similarity=0.047 Sum_probs=103.4
Q ss_pred ccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC--ccceeeeeecCCeeEEEEEc
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN--LVKIISSCSNGNFKALVLEY 803 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 803 (902)
.+|.+....+.|..+.||++...+|+.|++|+.... ....+.+|+++++.+.+.. +++++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345554444466679999998767888999987543 3367889999999885434 66788888888889999999
Q ss_pred cCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccC----------------------------------------
Q 046199 804 MANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGY---------------------------------------- 843 (902)
Q Consensus 804 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---------------------------------------- 843 (902)
++|.++. ... .. ...++.++++.+..+|...
T Consensus 97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 211 12 2357788888888888311
Q ss_pred ---------------CCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 844 ---------------SNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 844 ---------------~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
..+++|+|++|.||++++++.++|+|||.|...
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999988766779999998753
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.2e-09 Score=120.29 Aligned_cols=142 Identities=13% Similarity=0.160 Sum_probs=107.5
Q ss_pred ccCeecccceeeEEEEEeCCCcEEEEEEee--ecc-chhhhhHHHHHHHHHhCC--CCCccceeeeeecC---CeeEEEE
Q 046199 730 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFH--LQF-DGALKSFDAECEVLKSVR--HRNLVKIISSCSNG---NFKALVL 801 (902)
Q Consensus 730 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 801 (902)
..+.++.|.++.||++... +..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567899999999999874 4688888775 332 123467889999999997 45688999888766 5589999
Q ss_pred EccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccC--------------------------------------
Q 046199 802 EYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGY-------------------------------------- 843 (902)
Q Consensus 802 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-------------------------------------- 843 (902)
||++|..+.+.. ...++......++.+++++|..||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998774421 233678888899999999999999410
Q ss_pred -----------------CCCeEEcCCCCCCEEEcCCCc--EEEEeecCcee
Q 046199 844 -----------------SNPVVHCDIKPSNILLDDDMV--AHLSDFGIAKL 875 (902)
Q Consensus 844 -----------------~~~ivHrDlkp~NIll~~~~~--~kL~DFG~a~~ 875 (902)
...++|+|++|.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999875
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=2.1e-10 Score=125.16 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=6.5
Q ss_pred CcceEEEecCccc
Q 046199 92 STLKILILGDNQL 104 (902)
Q Consensus 92 ~~L~~L~ls~n~l 104 (902)
..++.|.+....+
T Consensus 107 ~~v~~L~lg~~~~ 119 (362)
T 2ra8_A 107 PSLKQITIGXWGY 119 (362)
T ss_dssp GGCSEEEECCCCS
T ss_pred hhcceEEEccccc
Confidence 3455566554443
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.93 E-value=1.3e-11 Score=127.65 Aligned_cols=162 Identities=20% Similarity=0.169 Sum_probs=109.9
Q ss_pred ceeeeeEEeeCCCCcEEEEEecc---CCcceecCc-ccCCCCCCCeeeccccccccCCCcc-ccCCCcceE--EEecCcc
Q 046199 31 VCSWIGITCDVSTHRVTALNISD---FGLTGTISS-QLGNLSSLQTLDLSHNRFSGTIPSS-IFSISTLKI--LILGDNQ 103 (902)
Q Consensus 31 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~--L~ls~n~ 103 (902)
.|+|.|+.|+..+.+|+.+...+ ..+.|.+++ .+..++. .|...+|..++.++-+ +...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999998777887665544 334455543 2333332 3444555555544432 555666666 7777774
Q ss_pred ccCCCCc---ccccCCCcccEEEcccCcccCcCCcchhccCcccccCcCccceeeecccccCCCCchhhcccc--cccee
Q 046199 104 LSGSFPS---FIISNTSSLRAIDCNYNSLSGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGEIPQELGNLA--ELEWL 178 (902)
Q Consensus 104 l~~~~~~---~~~~~~~~L~~ldls~n~l~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L 178 (902)
.. .++. .+..++++|++||||+|+|++- ..+|..++.+++|++|+|++|+|++. ..+..++ +|++|
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l------~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRL------DDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCC------GGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCC------ccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 33 2221 1235678888888888888752 23667778889999999999999853 4566666 89999
Q ss_pred ecccCcCCCCCCh-------hhhccCcccEEe
Q 046199 179 SLPRSFLTGTIPS-------SIFNLSSLLELD 203 (902)
Q Consensus 179 ~L~~n~l~~~~p~-------~~~~l~~L~~L~ 203 (902)
+|++|.+.+.+|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999887763 467889999887
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.92 E-value=4e-08 Score=108.87 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=57.8
Q ss_pred CCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCCccccccCcccccc
Q 046199 477 PIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNYLTGDIPTTIGG 556 (902)
Q Consensus 477 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 556 (902)
+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++......|.++.+|+.+.+.++.++.....+|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 33445555566666666544 44444555556666666655433 33233344555555555555555555444455555
Q ss_pred CCccceEEccCcccCCCccccccccccCCeEeCcC
Q 046199 557 LTNLQLLSLENNRLHGPIPESFGALTSLESLDLSV 591 (902)
Q Consensus 557 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 591 (902)
+.+|+.+.|..+ ++.+-..+|.++++|+.+.+..
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 555555555433 4433344555555555555543
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.88 E-value=6.2e-08 Score=107.34 Aligned_cols=302 Identities=9% Similarity=0.065 Sum_probs=184.1
Q ss_pred cCCCcccceeeccCccCCCCCCccccccccccEEEccCCcccCcccccccccccccEEecccccCCCCCCcccccccccC
Q 046199 287 LIGLPNIERLNLGLNNLSGRIPGFIFNASKLFLLELTGNSFSGFIPDTLVNLRNLEHLGLGYNYLTSSTPELSFLSSLAN 366 (902)
Q Consensus 287 l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~ 366 (902)
+....+|+.+.+.. .++.+...+|.++++|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.... ..+..
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~-----~aF~~ 112 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGD-----YVFQG 112 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECT-----TTTTT
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEecc-----ceecc
Confidence 44456777777754 355555667777778888877644 554555566665 5666655432 322222 22332
Q ss_pred CCCCceeeeccCCCCcccCcccccccccccEEEeecCcccccCCcccCCCCCCcEEEeecceecccCCcccccccccCee
Q 046199 367 SSSSKYIVLAENPLNGVLPSSIGNLPITLEEIYLQNCKIRGNIPKEIGNLVNLTTLHLGNNQLSGSIPITVGRLNTLQGL 446 (902)
Q Consensus 367 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 446 (902)
.+|+.+.+.++- .......|.. . +++.+.+..+ ++.+....|..+..++.+.+..+.........+ ........
T Consensus 113 -~~L~~i~lp~~~-~~i~~~~F~~-~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 186 (379)
T 4h09_A 113 -TDLDDFEFPGAT-TEIGNYIFYN-S-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNKNKTI 186 (379)
T ss_dssp -CCCSEEECCTTC-CEECTTTTTT-C-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEETTSSE
T ss_pred -CCcccccCCCcc-cccccccccc-c-eeeeeeccce-eeccccchhcccccccccccccccceeecccce-ecccccce
Confidence 255666554432 1111122222 1 3444444332 333444555555666655555433321111000 00000000
Q ss_pred ecccccccCCCCCcCCCCCeEeccCccccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCCCccCCCC
Q 046199 447 GLENNKLEGPIPDDLCQLSELHVDHNKLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSLNGSL 526 (902)
Q Consensus 447 ~L~~N~l~~~~p~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 526 (902)
. .....-..+..+.+..+. .......+....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++...
T Consensus 187 ~--------~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~ 255 (379)
T 4h09_A 187 L--------ESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIG 255 (379)
T ss_dssp E--------EECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEEC
T ss_pred e--------ccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeC
Confidence 0 000011134444443322 2244567778888999988765 55566778999999999999876 66566
Q ss_pred ccccccccccceeccCCccccccCccccccCCccceEEccCcccCCCccccccccccCCeEeCcCccccccCCccccccc
Q 046199 527 PLDIGNMKVVVEINLSRNYLTGDIPTTIGGLTNLQLLSLENNRLHGPIPESFGALTSLESLDLSVNNLSGVIPISLEKLV 606 (902)
Q Consensus 527 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 606 (902)
...|.++..|+.+.+..+ +.......|.++.+|+.+.+.++.++.+.+.+|.++.+|+.++|..+ ++.+-..+|.+++
T Consensus 256 ~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 333 (379)
T 4h09_A 256 SFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCK 333 (379)
T ss_dssp TTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred ccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCC
Confidence 778889999999999765 66566788999999999999999998667789999999999999765 7766677899999
Q ss_pred ccccccccCC
Q 046199 607 YLKDLNLSFN 616 (902)
Q Consensus 607 ~L~~L~l~~N 616 (902)
+|+.+.+..+
T Consensus 334 ~L~~i~ip~~ 343 (379)
T 4h09_A 334 ALSTISYPKS 343 (379)
T ss_dssp TCCCCCCCTT
T ss_pred CCCEEEECCc
Confidence 9999987554
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=3.4e-09 Score=115.64 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=15.7
Q ss_pred CCCCCEEEccCccccCcCCCccc--CCCCCceEecc
Q 046199 239 LPNLEVLGIDENHLVGDVPNTIF--NMSTLKALSLL 272 (902)
Q Consensus 239 l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 272 (902)
+++|+.|+|..|.++......+. .+++|+.|+|+
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 44555555555554322222222 45555555553
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.63 E-value=7.3e-08 Score=103.97 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=101.5
Q ss_pred cccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCC----CCccceeeeeecCCeeEEEEE
Q 046199 727 HFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH----RNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 727 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 802 (902)
.+...+.++.|....||++ ++.+++|+.... .....+.+|.++++.+.+ ..+++++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4455678999999999998 667889976432 224568899999988865 234556555 45689999
Q ss_pred ccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccC---------------------------------------
Q 046199 803 YMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGY--------------------------------------- 843 (902)
Q Consensus 803 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--------------------------------------- 843 (902)
|++|.++.+... ..++..+...++.+++..+..||...
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864321 23566677778888888888888211
Q ss_pred ---------------------CCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 844 ---------------------SNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 844 ---------------------~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
...++|+|++|.||+++.++.+.++||+.|..-
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999998654
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.60 E-value=3e-09 Score=104.73 Aligned_cols=127 Identities=14% Similarity=0.147 Sum_probs=76.7
Q ss_pred CcceecCcccCCCCCCCeeecccc-cccc----CCCccccCCCcceEEEecCccccCCCCcccccCCCcccEEEcccCcc
Q 046199 55 GLTGTISSQLGNLSSLQTLDLSHN-RFSG----TIPSSIFSISTLKILILGDNQLSGSFPSFIISNTSSLRAIDCNYNSL 129 (902)
Q Consensus 55 ~l~g~~~~~l~~l~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~L~~ldls~n~l 129 (902)
++...+...+...+.|++|+|++| .+.. .+...+...++|++|+|++|.+...-
T Consensus 23 ~~~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g--------------------- 81 (185)
T 1io0_A 23 DVEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPV--------------------- 81 (185)
T ss_dssp CHHHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHH---------------------
T ss_pred HHHHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHH---------------------
Confidence 334445566777888888888888 7752 23444556677888888888775320
Q ss_pred cCcCCcchhccCcccccCcCccceeeecccccCCC----Cchhhccccccceeec--ccCcCCCC----CChhhhccCcc
Q 046199 130 SGELPANIFRAIPKDIGNLTKLKELYLGYNKLQGE----IPQELGNLAELEWLSL--PRSFLTGT----IPSSIFNLSSL 199 (902)
Q Consensus 130 ~~~~~~~~~~~ip~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L 199 (902)
...+...+...+.|++|+|++|.|... +...+...++|++|+| ++|.+... +...+...++|
T Consensus 82 --------~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L 153 (185)
T 1io0_A 82 --------AFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTL 153 (185)
T ss_dssp --------HHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSC
T ss_pred --------HHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCc
Confidence 111333444445666666666666532 3444555566777777 66666532 23344455677
Q ss_pred cEEeeeeCCCC
Q 046199 200 LELDFSNNSLT 210 (902)
Q Consensus 200 ~~L~Ls~N~l~ 210 (902)
++|+|++|.+.
T Consensus 154 ~~L~L~~n~i~ 164 (185)
T 1io0_A 154 LKFGYHFTQQG 164 (185)
T ss_dssp CEEECCCSSHH
T ss_pred CEEeccCCCCC
Confidence 77777777653
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=2.4e-08 Score=103.20 Aligned_cols=41 Identities=29% Similarity=0.327 Sum_probs=24.5
Q ss_pred cccccceeecccCcCCC--CCChhhhccCcccEEeeeeCCCCc
Q 046199 171 NLAELEWLSLPRSFLTG--TIPSSIFNLSSLLELDFSNNSLTG 211 (902)
Q Consensus 171 ~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~ 211 (902)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 45566666666666665 344555566666666666666553
No 417
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.52 E-value=1.4e-07 Score=100.89 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=100.8
Q ss_pred cCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCC--ccceeeeeecCC---eeEEEEEcc
Q 046199 731 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRN--LVKIISSCSNGN---FKALVLEYM 804 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 804 (902)
.+.++.|....||++. ..+++|+.+.. .....+.+|+++++.+. +.. +++++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999864 56889986432 34577899999998883 333 455655544333 458999999
Q ss_pred CCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc------------------------------------------
Q 046199 805 ANGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG------------------------------------------ 842 (902)
Q Consensus 805 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~------------------------------------------ 842 (902)
+|.++.+... ..++..+...++.+++..+..||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 2356777788888888888888831
Q ss_pred -------------CCCCeEEcCCCCCCEEEcC--CCcEEEEeecCceec
Q 046199 843 -------------YSNPVVHCDIKPSNILLDD--DMVAHLSDFGIAKLL 876 (902)
Q Consensus 843 -------------~~~~ivHrDlkp~NIll~~--~~~~kL~DFG~a~~~ 876 (902)
....++|+|++|.||++++ +..+.++||+.+..-
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 0145899999999999998 456889999998764
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=1.2e-06 Score=93.68 Aligned_cols=137 Identities=13% Similarity=0.085 Sum_probs=96.9
Q ss_pred cCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCC---Cccceeeeee-cCCeeEEEEEccCC
Q 046199 731 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR---NLVKIISSCS-NGNFKALVLEYMAN 806 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 806 (902)
.+.++.|....||+. ++.+++|+.+ .......+.+|+++++.+.+. .|++++.+.. ..+..|+||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888999988 5678888843 223457889999999999642 3667777764 45678899999999
Q ss_pred CChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc--------------------------------------------
Q 046199 807 GSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG-------------------------------------------- 842 (902)
Q Consensus 807 g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-------------------------------------------- 842 (902)
.++.+... ..++......++.++++.+..||..
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88866321 1234445555555555555555521
Q ss_pred -------------CCCCeEEcCCCCCCEEEcC---CCc-EEEEeecCceec
Q 046199 843 -------------YSNPVVHCDIKPSNILLDD---DMV-AHLSDFGIAKLL 876 (902)
Q Consensus 843 -------------~~~~ivHrDlkp~NIll~~---~~~-~kL~DFG~a~~~ 876 (902)
....++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2346799999999999987 455 489999988753
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=1e-06 Score=92.94 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=61.7
Q ss_pred cccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCC---CccceeeeeecCCeeEEEEEccC
Q 046199 729 SEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR---NLVKIISSCSNGNFKALVLEYMA 805 (902)
Q Consensus 729 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 805 (902)
...+.++.|.++.||+++..+|+.|++|+...........+.+|++.++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345679999999999999888999999986543333347789999999999765 578888764 3589999999
Q ss_pred CCCh
Q 046199 806 NGSL 809 (902)
Q Consensus 806 ~g~L 809 (902)
|+++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=1.6e-06 Score=90.89 Aligned_cols=136 Identities=18% Similarity=0.080 Sum_probs=99.5
Q ss_pred eeccccee-eEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEEEccCCCCh
Q 046199 733 LIGIGSFG-TVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVLEYMANGSL 809 (902)
Q Consensus 733 ~lg~G~~g-~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 809 (902)
.+..|..+ .||+..... +..+++|+.+.. ....+.+|...++.+. +--|+++++++.+.+..|+|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455554 699987654 678999986533 3467888999998884 44478899999999999999999999888
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----------------------------------------------
Q 046199 810 EKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG----------------------------------------------- 842 (902)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~----------------------------------------------- 842 (902)
.+..... ......+..+++..+..||..
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7765321 122345666777777777720
Q ss_pred --------CCCCeEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 843 --------YSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 843 --------~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
....++|+|+.+.||+++.++.+-|+||+.+..-
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 0123799999999999998877779999998753
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=7.9e-08 Score=94.46 Aligned_cols=114 Identities=13% Similarity=0.178 Sum_probs=53.3
Q ss_pred cccCCCcCceEecCCC-CccCc----ccccccCCCCceEEEcCCCccCCC----CccccccccccceeccCCcccccc--
Q 046199 481 CFGNLNSLRNLSLGSN-ELSSF----IPSTFWNLNNILSFDFSSNSLNGS----LPLDIGNMKVVVEINLSRNYLTGD-- 549 (902)
Q Consensus 481 ~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~-- 549 (902)
.+...++|++|+|++| .+... +...+...+.|++|+|++|.|... +...+...+.|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4455566666667666 66532 223344455666666666665531 111222234455555555554432
Q ss_pred --CccccccCCccceEEc--cCcccCCCc----cccccccccCCeEeCcCccc
Q 046199 550 --IPTTIGGLTNLQLLSL--ENNRLHGPI----PESFGALTSLESLDLSVNNL 594 (902)
Q Consensus 550 --~p~~~~~l~~L~~L~L--s~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l 594 (902)
+...+...+.|++|+| ++|.|.... ...+...++|+.|+|++|.+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2333444445555555 445554321 12222334455555555544
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.28 E-value=1.4e-06 Score=95.21 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=58.2
Q ss_pred cccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCC--CccceeeeeecC-CeeEEEEEccC
Q 046199 729 SEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR--NLVKIISSCSNG-NFKALVLEYMA 805 (902)
Q Consensus 729 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-~~~~lv~e~~~ 805 (902)
...+.++.|....||+... +++.+++|+.... ..+.+|+.+++.+... .++++++++... +..|+||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456788999999999975 6789999987432 3588899999988643 366777776654 67899999999
Q ss_pred CCChH
Q 046199 806 NGSLE 810 (902)
Q Consensus 806 ~g~L~ 810 (902)
|.++.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 86553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.27 E-value=1.2e-06 Score=96.13 Aligned_cols=80 Identities=11% Similarity=0.007 Sum_probs=57.9
Q ss_pred cCee-cccceeeEEEEEeC-------CCcEEEEEEeeecc---chhhhhHHHHHHHHHhCC-C--CCccceeeeeecC--
Q 046199 731 KSLI-GIGSFGTVYKGRFL-------DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVR-H--RNLVKIISSCSNG-- 794 (902)
Q Consensus 731 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 794 (902)
.+.| +.|....+|++... +++.+++|+..... ......+.+|+++++.+. + ..++++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88999999998764 26789999765432 111357889999998884 3 3577888887655
Q ss_pred -CeeEEEEEccCCCChH
Q 046199 795 -NFKALVLEYMANGSLE 810 (902)
Q Consensus 795 -~~~~lv~e~~~~g~L~ 810 (902)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=2e-05 Score=85.59 Aligned_cols=139 Identities=17% Similarity=0.117 Sum_probs=81.2
Q ss_pred CeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC--CCCccceee------eeecCCeeEEEEEc
Q 046199 732 SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR--HRNLVKIIS------SCSNGNFKALVLEY 803 (902)
Q Consensus 732 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv~e~ 803 (902)
+.++.|..+.||++...++ .+++|+.... ...+..|.++++.+. .-.+++++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4456677899999987544 5999988652 134445666666553 113444443 12346778999999
Q ss_pred cCCCChH-----H---------HHhh--CCC--C---------CCHHH-------------------------------H
Q 046199 804 MANGSLE-----K---------CLYS--SNR--S---------LDIFQ-------------------------------R 825 (902)
Q Consensus 804 ~~~g~L~-----~---------~l~~--~~~--~---------~~~~~-------------------------------~ 825 (902)
++|..+. . .++. ... . ..+.. .
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 1111 100 0 11111 0
Q ss_pred HHHHHHHHHHHHHHHc----------cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 826 LSIMIDVALALEYLHF----------GYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 826 ~~i~~qi~~~L~~LH~----------~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
..+..++..++++++. ....+++|+|+++.||+++.++.+.++||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223345566641 0257899999999999998888999999998864
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=2.1e-05 Score=87.40 Aligned_cols=75 Identities=15% Similarity=0.047 Sum_probs=50.6
Q ss_pred cCeecccceeeEEEEEeC-CCcEEEEEEeeeccc-------hhhhhHHHHHHHHHhCCC---CCccceeeeeecCCeeEE
Q 046199 731 KSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-------GALKSFDAECEVLKSVRH---RNLVKIISSCSNGNFKAL 799 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~l 799 (902)
.+.+|.|..+.||+++.. +++.|++|....... ...+++..|+++++.+.. ..+++++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 457899999999999764 468899998653211 123567889999887742 3455666543 344689
Q ss_pred EEEccCCC
Q 046199 800 VLEYMANG 807 (902)
Q Consensus 800 v~e~~~~g 807 (902)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.78 E-value=0.00012 Score=77.68 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=92.9
Q ss_pred ccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC---CCCccceeeeeecCCeeEEEEEccCC
Q 046199 730 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR---HRNLVKIISSCSNGNFKALVLEYMAN 806 (902)
Q Consensus 730 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (902)
-.+.|+.|....+|+... +++.+++|+.... ....+..|++.++.+. ...+++++++....+..++||||++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346789999999999986 5778999987643 3567889999998884 36688999988888899999999998
Q ss_pred CChH--------H---HHhhCCC--C-------------------CCHHHHH---HHHH----------------HHHHH
Q 046199 807 GSLE--------K---CLYSSNR--S-------------------LDIFQRL---SIMI----------------DVALA 835 (902)
Q Consensus 807 g~L~--------~---~l~~~~~--~-------------------~~~~~~~---~i~~----------------qi~~~ 835 (902)
..+. + .++.... . -+|.... ++.. +++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 1 1222111 0 1233211 1111 11111
Q ss_pred H-HHHH-ccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 046199 836 L-EYLH-FGYSNPVVHCDIKPSNILLDDDMVAHLSDFG 871 (902)
Q Consensus 836 L-~~LH-~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 871 (902)
+ ..|. ......++|+|+.+.|++++.++ +.|+||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 2332 12257899999999999999887 8999984
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.73 E-value=0.00015 Score=76.36 Aligned_cols=80 Identities=14% Similarity=0.102 Sum_probs=59.5
Q ss_pred ccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-C--CCccceeeeeecCCeeEEEEE
Q 046199 726 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-H--RNLVKIISSCSNGNFKALVLE 802 (902)
Q Consensus 726 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~e 802 (902)
....-.+.+|.|..+.||+++..+|+.|++|+...........+..|++.|+.+. . -.+++++++. ..++|||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 3455567889999999999999999999999876544444467889999999884 2 2355666543 2378999
Q ss_pred ccCCCCh
Q 046199 803 YMANGSL 809 (902)
Q Consensus 803 ~~~~g~L 809 (902)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987643
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.56 E-value=0.00019 Score=80.25 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=45.8
Q ss_pred cCeecccceeeEEEEEeCCCcEEEEEEeeecc----ch-----hhhhHHHHHHHHH-hCCCCCccceeeeeecCCeeEEE
Q 046199 731 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF----DG-----ALKSFDAECEVLK-SVRHRNLVKIISSCSNGNFKALV 800 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~-----~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv 800 (902)
.+.+|.|..+.||++.. +++.|+||...... .. ....++.|+..+. ......+++++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 56789999999999965 56789999432210 11 1223344443322 12335677777765 4567899
Q ss_pred EEcc-CC
Q 046199 801 LEYM-AN 806 (902)
Q Consensus 801 ~e~~-~~ 806 (902)
|||+ +|
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.52 E-value=1.8e-05 Score=75.56 Aligned_cols=83 Identities=12% Similarity=0.065 Sum_probs=41.8
Q ss_pred CCceEEEcCCCccCCCCccccccccccceeccCCcc-ccccCccccccC----CccceEEccCcc-cCCCcccccccccc
Q 046199 510 NNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSRNY-LTGDIPTTIGGL----TNLQLLSLENNR-LHGPIPESFGALTS 583 (902)
Q Consensus 510 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 583 (902)
..|+.||++++.++..--..+..+++|++|+|+++. |+...-..++.+ ++|+.|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 456666666666654433444555555555555553 443333333332 245555555542 44333334445555
Q ss_pred CCeEeCcCc
Q 046199 584 LESLDLSVN 592 (902)
Q Consensus 584 L~~L~Ls~N 592 (902)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.52 E-value=0.00026 Score=75.91 Aligned_cols=156 Identities=13% Similarity=0.132 Sum_probs=86.7
Q ss_pred CHHHHHhhcccccc-----cCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC--ccceee
Q 046199 717 SYRELLLATDHFSE-----KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN--LVKIIS 789 (902)
Q Consensus 717 ~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~ 789 (902)
+.+++.....+|.+ .+.|+.|....+|++...++ .+++|+.... ...+.+..|.++++.+.... +++++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 33444333344543 34566788889999987555 6889988652 12345667888887774212 344443
Q ss_pred e------eecCCeeEEEEEccCCCChHH-----H---------HhhC--C--CC----CC---HHHHHH-----------
Q 046199 790 S------CSNGNFKALVLEYMANGSLEK-----C---------LYSS--N--RS----LD---IFQRLS----------- 827 (902)
Q Consensus 790 ~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~--~--~~----~~---~~~~~~----------- 827 (902)
. ....+..+++|+|++|..+.. + ++.. . .. .. +.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 2 123466789999999865321 0 1111 0 00 01 111000
Q ss_pred -HHHHHHHHHHHHHc----cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 828 -IMIDVALALEYLHF----GYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 828 -i~~qi~~~L~~LH~----~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
+...+...+++++. ....+++|+|+.+.||++++++.+.++||+.+..
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 00113344455541 1245899999999999999876668999998764
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=3.6e-05 Score=73.48 Aligned_cols=82 Identities=11% Similarity=0.114 Sum_probs=38.1
Q ss_pred cCceEecCCCCccCcccccccCCCCceEEEcCCCc-cCCCCccccccc----cccceeccCCcc-ccccCccccccCCcc
Q 046199 487 SLRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNS-LNGSLPLDIGNM----KVVVEINLSRNY-LTGDIPTTIGGLTNL 560 (902)
Q Consensus 487 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 560 (902)
.|+.||++++.++...-..+.++++|+.|+|+++. ++..--..+..+ ++|++|+|+++. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544433444455555555555553 332222222222 245555555542 443333344455555
Q ss_pred ceEEccCc
Q 046199 561 QLLSLENN 568 (902)
Q Consensus 561 ~~L~Ls~N 568 (902)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.38 E-value=0.00048 Score=74.27 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=76.4
Q ss_pred Ceecccceee-EEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCC--CCccceeeeeecCCeeEEEEEccCCCC
Q 046199 732 SLIGIGSFGT-VYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH--RNLVKIISSCSNGNFKALVLEYMANGS 808 (902)
Q Consensus 732 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 808 (902)
+.++.|.... +|+....+++.+++|...... .+.+..|+.+++.+.. -.+++++.+....+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565555444 678765447788887654321 1445667777777742 23567777644444 68999997766
Q ss_pred hHHHHhhC-------------------------CCCCCHHHHH-------H-H------------HHHHHHHHHHHH---
Q 046199 809 LEKCLYSS-------------------------NRSLDIFQRL-------S-I------------MIDVALALEYLH--- 840 (902)
Q Consensus 809 L~~~l~~~-------------------------~~~~~~~~~~-------~-i------------~~qi~~~L~~LH--- 840 (902)
+.+++... ...++..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 64433210 0112221110 0 0 001111222221
Q ss_pred ccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCceec
Q 046199 841 FGYSNPVVHCDIKPSNILLDDD----MVAHLSDFGIAKLL 876 (902)
Q Consensus 841 ~~~~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~~~ 876 (902)
......++|+|+.+.||+++.+ +.+.++||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1125689999999999999874 68999999998754
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.34 E-value=0.00052 Score=72.81 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=77.4
Q ss_pred cCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCc-cceeeeeecCCeeEEEEEcc-CCCC
Q 046199 731 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL-VKIISSCSNGNFKALVLEYM-ANGS 808 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~ 808 (902)
.+.|+.|....+|++ +.+++|+....... .....+|+.+++.+....+ +++++...+ .-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence 678889999999999 56888987643221 2234568888877742222 566665433 346899999 6654
Q ss_pred hHHH------------------HhhCCCC----CCH-HHHHHHHHH--------------HHHHHH----HHH-ccCCCC
Q 046199 809 LEKC------------------LYSSNRS----LDI-FQRLSIMID--------------VALALE----YLH-FGYSNP 846 (902)
Q Consensus 809 L~~~------------------l~~~~~~----~~~-~~~~~i~~q--------------i~~~L~----~LH-~~~~~~ 846 (902)
+... ++..... ... ..+..+..+ +...+. .+. ......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4210 1111110 011 111111110 111111 111 112456
Q ss_pred eEEcCCCCCCEEEcCCCcEEEEeecCceec
Q 046199 847 VVHCDIKPSNILLDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 876 (902)
++|+|+.|.||+ ..++.+.++||..|..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56668899999988653
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.23 E-value=0.00094 Score=71.71 Aligned_cols=140 Identities=11% Similarity=0.109 Sum_probs=82.2
Q ss_pred CeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCC--Cccceeee-----eecCCeeEEEEEcc
Q 046199 732 SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR--NLVKIISS-----CSNGNFKALVLEYM 804 (902)
Q Consensus 732 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~ 804 (902)
+.++ |....||++...+|+.+++|+.+... ...+.+..|..+++.+... .+++++.. ...++..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 77789999887677789999986431 1235677788888777422 24444443 22356678999999
Q ss_pred CCCChH-----HH---------Hhh--C------CCCCCHHHH----HHH---------------HHHHHHHHHHHHc--
Q 046199 805 ANGSLE-----KC---------LYS--S------NRSLDIFQR----LSI---------------MIDVALALEYLHF-- 841 (902)
Q Consensus 805 ~~g~L~-----~~---------l~~--~------~~~~~~~~~----~~i---------------~~qi~~~L~~LH~-- 841 (902)
+|..+. .+ ++. . ....+.... ..+ ...+...++.+..
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 885432 11 111 0 011221111 000 1111112222221
Q ss_pred --cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 046199 842 --GYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKL 875 (902)
Q Consensus 842 --~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 875 (902)
.....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1256789999999999999 4 899999988764
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.20 E-value=0.00098 Score=72.66 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=84.6
Q ss_pred cCeecccceeeEEEEEeC--------CCcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEE
Q 046199 731 KSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (902)
.+.+..|-...+|++... +++.|++|+..... .......+|.++++.+. +.-.+++++.+.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888999999864 25789999863321 23456678999998884 3334677776653 2999
Q ss_pred EccCCCChHH--------------H---HhhC----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 046199 802 EYMANGSLEK--------------C---LYSS----NRSLD--IFQRLSIMIDVAL-------------------ALEYL 839 (902)
Q Consensus 802 e~~~~g~L~~--------------~---l~~~----~~~~~--~~~~~~i~~qi~~-------------------~L~~L 839 (902)
||++|.++.. . ++.. .+... +.++.++..++.. .++++
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865431 0 1111 11122 3445555544322 22333
Q ss_pred H-----ccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCcee
Q 046199 840 H-----FGYSNPVVHCDIKPSNILLDDD----MVAHLSDFGIAKL 875 (902)
Q Consensus 840 H-----~~~~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~~ 875 (902)
. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1124578999999999999876 7899999998864
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00064 Score=61.81 Aligned_cols=61 Identities=25% Similarity=0.317 Sum_probs=42.1
Q ss_pred ceEEccCcccC-CCccccccccccCCeEeCcCccccccCCcccccccccccccccCCcceecCC
Q 046199 561 QLLSLENNRLH-GPIPESFGALTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLEGEIP 623 (902)
Q Consensus 561 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 623 (902)
..++.+++.|+ ..+|..+. ++|+.|||++|+|+...+..|..+++|+.|+|++|+|.+..-
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 36677777775 24554332 357888888888886666677778888888888888876544
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.00 E-value=0.0043 Score=66.85 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=44.3
Q ss_pred ccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCC---CCCccceeee------eecCCeeEEEEEccCC
Q 046199 736 IGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR---HRNLVKIISS------CSNGNFKALVLEYMAN 806 (902)
Q Consensus 736 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~~ 806 (902)
.|....||++...++ .+++|+...... ..|..+++.+. -|.+++++.. ....+..++||+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333678999987666 999998765431 35666666553 2335555532 2345788999999998
Q ss_pred CCh
Q 046199 807 GSL 809 (902)
Q Consensus 807 g~L 809 (902)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.96 E-value=0.0015 Score=72.74 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=50.1
Q ss_pred cCeecccceeeEEEEEeCC--------CcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEE
Q 046199 731 KSLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (902)
.+.|+.|....||++...+ ++.|++|+.... ...+.+..|..+++.+. +.-.+++++.+.. .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998753 578999988432 11145567999888884 3334677776542 3899
Q ss_pred EccCCCCh
Q 046199 802 EYMANGSL 809 (902)
Q Consensus 802 e~~~~g~L 809 (902)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.86 E-value=0.003 Score=70.80 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=48.9
Q ss_pred cCeecccceeeEEEEEeCC-CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC-ccceeeeeecCCeeEEEEEccCCCC
Q 046199 731 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN-LVKIISSCSNGNFKALVLEYMANGS 808 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g~ 808 (902)
.+.|+.|-...+|++...+ ++.|++|+....... .-.-.+|..+++.+...+ .+++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 4568888889999998765 578999987543221 122368999999886443 467777763 2 25999998854
Q ss_pred h
Q 046199 809 L 809 (902)
Q Consensus 809 L 809 (902)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.86 E-value=0.0003 Score=68.45 Aligned_cols=85 Identities=15% Similarity=0.204 Sum_probs=38.3
Q ss_pred CCCcCceEecCCC-CccCc----ccccccCCCCceEEEcCCCccCCC----CccccccccccceeccCCccccccCc---
Q 046199 484 NLNSLRNLSLGSN-ELSSF----IPSTFWNLNNILSFDFSSNSLNGS----LPLDIGNMKVVVEINLSRNYLTGDIP--- 551 (902)
Q Consensus 484 ~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p--- 551 (902)
+-+.|+.|+|++| +|... +.+.+..-+.|+.|+|++|+|... +...+..-+.|++|+|++|+|....-
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3445566666553 54321 223334445555555555555422 11122223445555555555543221
Q ss_pred -cccccCCccceEEccCc
Q 046199 552 -TTIGGLTNLQLLSLENN 568 (902)
Q Consensus 552 -~~~~~l~~L~~L~Ls~N 568 (902)
+.+..-+.|+.|+|++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 22333345555565543
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.85 E-value=0.0023 Score=69.91 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=45.8
Q ss_pred cCeecccceeeEEEEEeCC---------CcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCC-ccceeeeeecCCeeEEE
Q 046199 731 KSLIGIGSFGTVYKGRFLD---------GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN-LVKIISSCSNGNFKALV 800 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 800 (902)
.+.++.|....+|++...+ ++.|++|+...... .......|.++++.+.... ++++++.. .+ ++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence 3467788888999998654 26889998754322 1223467888888875333 55677654 22 689
Q ss_pred EEccCCCCh
Q 046199 801 LEYMANGSL 809 (902)
Q Consensus 801 ~e~~~~g~L 809 (902)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988543
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.72 E-value=0.00026 Score=68.91 Aligned_cols=17 Identities=12% Similarity=0.264 Sum_probs=7.3
Q ss_pred ccccccCeeeccccccc
Q 046199 438 GRLNTLQGLGLENNKLE 454 (902)
Q Consensus 438 ~~l~~L~~L~L~~N~l~ 454 (902)
.....|+.|+|++|+|.
T Consensus 67 ~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSCCCEEECTTSCCB
T ss_pred hhCCCcCEEEccCCCCC
Confidence 33344444444444443
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.61 E-value=0.0029 Score=57.44 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=17.5
Q ss_pred CceEecCCCCccCcccccccCCCCceEEEcCCCcc
Q 046199 488 LRNLSLGSNELSSFIPSTFWNLNNILSFDFSSNSL 522 (902)
Q Consensus 488 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 522 (902)
|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44445555555444444445555555555555544
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.37 E-value=0.011 Score=64.53 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=84.5
Q ss_pred cCeecccceeeEEEEEeCC--------CcEEEEEEeeeccch------------------hhhhHHHHHHHHHhCC-CCC
Q 046199 731 KSLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDG------------------ALKSFDAECEVLKSVR-HRN 783 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~n 783 (902)
.+.|..|-...+|++...+ ++.|++++.-...+. ..+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456678888999988653 368888887433211 0122335888888884 445
Q ss_pred ccceeeeeecCCeeEEEEEccCCCChHH--H---------------HhhCC----CCCC--HHHHHHHHHHHH-------
Q 046199 784 LVKIISSCSNGNFKALVLEYMANGSLEK--C---------------LYSSN----RSLD--IFQRLSIMIDVA------- 833 (902)
Q Consensus 784 iv~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~~~--~~~~~~i~~qi~------- 833 (902)
.+++++++.. + +|+||++|.++.. + ++... +... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~-G---~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ-G---RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT-E---EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC-C---eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 6778877643 2 8999999754421 1 11111 1122 223344443321
Q ss_pred ---------------HHHH----HHH-ccCCCCeEEcCCCCCCEEEcCC------CcEEEEeecCcee
Q 046199 834 ---------------LALE----YLH-FGYSNPVVHCDIKPSNILLDDD------MVAHLSDFGIAKL 875 (902)
Q Consensus 834 ---------------~~L~----~LH-~~~~~~ivHrDlkp~NIll~~~------~~~kL~DFG~a~~ 875 (902)
.-++ ++. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 222 1224578999999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.62 E-value=0.044 Score=60.42 Aligned_cols=74 Identities=11% Similarity=0.176 Sum_probs=49.7
Q ss_pred cCeecccceeeEEEEEeCC--------CcEEEEEEeeeccchhhhhHHHHHHHHHhCC-CCCccceeeeeecCCeeEEEE
Q 046199 731 KSLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFKALVL 801 (902)
Q Consensus 731 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (902)
.+.+..|-...+|++...+ ++.|++|+...... ..-+..+|.++++.+. +.-.+++++.+. + +.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEEE
Confidence 3456778888999998753 57899998654322 2234467888888874 333556665442 2 6899
Q ss_pred EccCCCCh
Q 046199 802 EYMANGSL 809 (902)
Q Consensus 802 e~~~~g~L 809 (902)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.85 E-value=0.15 Score=56.03 Aligned_cols=30 Identities=30% Similarity=0.394 Sum_probs=25.5
Q ss_pred CeEEcCCCCCCEEE------cCCCcEEEEeecCcee
Q 046199 846 PVVHCDIKPSNILL------DDDMVAHLSDFGIAKL 875 (902)
Q Consensus 846 ~ivHrDlkp~NIll------~~~~~~kL~DFG~a~~ 875 (902)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4566899999998864
No 447
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=74.57 E-value=1.2 Score=30.86 Aligned_cols=6 Identities=17% Similarity=0.385 Sum_probs=2.5
Q ss_pred ehhhhh
Q 046199 668 LGVVLP 673 (902)
Q Consensus 668 ~~i~~~ 673 (902)
++.+++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334444
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.08 E-value=7.1 Score=38.08 Aligned_cols=86 Identities=9% Similarity=0.115 Sum_probs=61.4
Q ss_pred CCCCccceeeeeecCCeeEEEEEccCCCChHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHHccCCCCeEEcCCCCCCEE
Q 046199 780 RHRNLVKIISSCSNGNFKALVLEYMANGSLEKCLYSSNRSLDIFQRLSIMIDVALALE-YLHFGYSNPVVHCDIKPSNIL 858 (902)
Q Consensus 780 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~-~LH~~~~~~ivHrDlkp~NIl 858 (902)
.||++ -...-.+++.+.+.++.-+++.=...+ +..+...+++++.+|+...+ +++ .-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57887 444446677777777655343222233 23678889999999887666 444 4578889999999
Q ss_pred EcCCCcEEEEeecCceec
Q 046199 859 LDDDMVAHLSDFGIAKLL 876 (902)
Q Consensus 859 l~~~~~~kL~DFG~a~~~ 876 (902)
++.++.+++.-.|.-..+
T Consensus 117 f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL 134 (219)
T ss_dssp ECTTCCEEESCCEETTTB
T ss_pred EeCCCcEEEEEcCCcccC
Confidence 999999999999875544
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.31 E-value=0.61 Score=52.06 Aligned_cols=60 Identities=13% Similarity=0.037 Sum_probs=17.4
Q ss_pred cccCeecccceeeEEEEEeCC-CcEEEE------EEeeecc--chhhhhHHHHHHHHHhCCCCCccceeeee
Q 046199 729 SEKSLIGIGSFGTVYKGRFLD-GMEVAI------KVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSC 791 (902)
Q Consensus 729 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 791 (902)
.+.+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|..+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456666 99999998854 467888 6654322 22345678899999999999999988765
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.19 E-value=6.5 Score=38.24 Aligned_cols=87 Identities=8% Similarity=0.158 Sum_probs=61.9
Q ss_pred CCCCccceeeeeecCCeeEEEEEccCC-CChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 046199 780 RHRNLVKIISSCSNGNFKALVLEYMAN-GSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNIL 858 (902)
Q Consensus 780 ~h~niv~l~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (902)
.||+++.. .+-.+++.+.+.++.-+. .+... + +..+....++++.+|+...++++ .=+|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 58888866 455566665665554332 23332 3 23678889999999988886555 2478899999999
Q ss_pred EcCCCcEEEEeecCceecC
Q 046199 859 LDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 859 l~~~~~~kL~DFG~a~~~~ 877 (902)
++.++.++++-.|+-..+.
T Consensus 112 f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp ECTTSCEEESCCEETTTBS
T ss_pred EcCCCCEEEEEccCccCCC
Confidence 9999999999998755443
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=66.84 E-value=3.2 Score=28.87 Aligned_cols=28 Identities=14% Similarity=0.007 Sum_probs=12.5
Q ss_pred ehhhhhhHHHHHHHHHHHhhhheeeccc
Q 046199 668 LGVVLPLSVFIIAILLALGIGLITRYRK 695 (902)
Q Consensus 668 ~~i~~~~~~~~~~~~l~~~~~~~~r~r~ 695 (902)
.+++.+++++++.+++.++++..++.++
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 3444444444433333344445555544
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=66.67 E-value=3.6 Score=28.54 Aligned_cols=29 Identities=21% Similarity=0.073 Sum_probs=13.3
Q ss_pred ehhhhhhHHHHHHHHHHHhhhheeecccC
Q 046199 668 LGVVLPLSVFIIAILLALGIGLITRYRKG 696 (902)
Q Consensus 668 ~~i~~~~~~~~~~~~l~~~~~~~~r~r~~ 696 (902)
.+++.+++++++..++.++++..++.+++
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred EeehHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 34444444443333344444556666554
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=57.88 E-value=6.7 Score=26.35 Aligned_cols=16 Identities=13% Similarity=0.164 Sum_probs=8.1
Q ss_pred eeehhhhhhHHHHHHH
Q 046199 666 ILLGVVLPLSVFIIAI 681 (902)
Q Consensus 666 ~~~~i~~~~~~~~~~~ 681 (902)
.+++++++.++++.++
T Consensus 12 aIAGiVvG~v~gv~li 27 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALL 27 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHHHH
Confidence 3456666655544433
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=55.88 E-value=1.2e+02 Score=35.08 Aligned_cols=44 Identities=25% Similarity=0.231 Sum_probs=31.2
Q ss_pred HHHHHHHHHH--HHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 824 QRLSIMIDVA--LALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 824 ~~~~i~~qi~--~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
.+..+++.+| ..+.|+= || +|=.++||||+.+|++.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 3445555543 2344444 22 5888999999999999999999874
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=55.57 E-value=6.8 Score=26.74 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=5.4
Q ss_pred hhhhhHHHHHHHH
Q 046199 670 VVLPLSVFIIAIL 682 (902)
Q Consensus 670 i~~~~~~~~~~~~ 682 (902)
+++++++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4444444444333
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=53.75 E-value=1.5e+02 Score=33.72 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=48.3
Q ss_pred cceeeeeecCCeeEEEEEccCCCChHHHHhhC----------CCC------CCHHHHHHHHHHHH--HHHHHHHccCCCC
Q 046199 785 VKIISSCSNGNFKALVLEYMANGSLEKCLYSS----------NRS------LDIFQRLSIMIDVA--LALEYLHFGYSNP 846 (902)
Q Consensus 785 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~~------~~~~~~~~i~~qi~--~~L~~LH~~~~~~ 846 (902)
++.|.+........+ .|++++.++.+.+... ... ..+..+..+++.+| ..+.|+= .
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL---G-- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL---G-- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH---T--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee---e--
Confidence 344555544444343 4777765555544321 100 12344455555543 2345554 3
Q ss_pred eEEcCCCCCCEEEcCCCcEEEEeecCce
Q 046199 847 VVHCDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
| +|=.++|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3 4778999999999999999999874
No 457
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=44.53 E-value=91 Score=37.95 Aligned_cols=25 Identities=36% Similarity=0.351 Sum_probs=22.7
Q ss_pred cCCCCCCEEEcCCCcEEEEeecCce
Q 046199 850 CDIKPSNILLDDDMVAHLSDFGIAK 874 (902)
Q Consensus 850 rDlkp~NIll~~~~~~kL~DFG~a~ 874 (902)
+|=.++|||++.+|++.-+|||.+-
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred cCCCCcceEEeCCCCEEEEeehhhh
Confidence 5778999999999999999999874
No 458
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=43.90 E-value=11 Score=26.05 Aligned_cols=27 Identities=11% Similarity=0.453 Sum_probs=11.9
Q ss_pred hhhhhhHHHHHHHHHHHhhhheeeccc
Q 046199 669 GVVLPLSVFIIAILLALGIGLITRYRK 695 (902)
Q Consensus 669 ~i~~~~~~~~~~~~l~~~~~~~~r~r~ 695 (902)
.++.++...+++++++++++++.|+|+
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhh
Confidence 344444443434444444444444443
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.49 E-value=36 Score=28.41 Aligned_cols=46 Identities=11% Similarity=0.206 Sum_probs=28.7
Q ss_pred cccCCCCccccCCCcCceEecCCCCccCcccccccCCCCceEEEcCC
Q 046199 473 KLSGPIPACFGNLNSLRNLSLGSNELSSFIPSTFWNLNNILSFDFSS 519 (902)
Q Consensus 473 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 519 (902)
.++.+-..+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344455566777777777777654 4455556677777776666654
No 460
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=37.20 E-value=27 Score=26.29 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=14.6
Q ss_pred hhhhhHHHHHHHHH-HHhhhh-eeecccCCcccccccc
Q 046199 670 VVLPLSVFIIAILL-ALGIGL-ITRYRKGNTELSNIEV 705 (902)
Q Consensus 670 i~~~~~~~~~~~~l-~~~~~~-~~r~r~~~~~~~~~~~ 705 (902)
+++|.++++++++. ++++.+ ++++|++.+.++.++.
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeRMSQikr 49 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERMSQIKR 49 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTSSHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 44444444433333 333233 3334444444444443
No 461
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.17 E-value=57 Score=33.87 Aligned_cols=140 Identities=16% Similarity=0.097 Sum_probs=70.0
Q ss_pred ccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchhhhhHHHHHHHHHhCCCCCccceeee-----------------
Q 046199 728 FSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS----------------- 790 (902)
Q Consensus 728 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----------------- 790 (902)
++.++....|..|.++.+. ++..|+||-.. .-..+.+-.++...-.+.-|...-+.-.
T Consensus 71 v~~I~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 71 FKGIERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEEEECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred eeEEEeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 4455666667655444444 57889999431 2223333344443334444442211100
Q ss_pred -----eecCCeeEEEEEccCCCChHHHHhhC-CCCCCHHHHHHHHHHH--HHHHHHHH-ccCCCCeE-EcCCCCCCEEEc
Q 046199 791 -----CSNGNFKALVLEYMANGSLEKCLYSS-NRSLDIFQRLSIMIDV--ALALEYLH-FGYSNPVV-HCDIKPSNILLD 860 (902)
Q Consensus 791 -----~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi--~~~L~~LH-~~~~~~iv-HrDlkp~NIll~ 860 (902)
....+...++|||.+|..|.+.-... ...+..+ ...++ +-+++.+. ...+...+ +.-=.+.|||++
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 01123567999999976654421110 0112222 22332 23444444 21112121 122578999997
Q ss_pred CCC-cEEEEeecCceec
Q 046199 861 DDM-VAHLSDFGIAKLL 876 (902)
Q Consensus 861 ~~~-~~kL~DFG~a~~~ 876 (902)
+++ .+.++|-+.|..-
T Consensus 222 ~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 222 ERGATVVPIDSKIIPLD 238 (342)
T ss_dssp SBTTCEEECSCCCCCCC
T ss_pred CCCCeEEEEcCCccccC
Confidence 755 4899999998653
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.64 E-value=80 Score=26.23 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=26.7
Q ss_pred CCccCcccccccCCCCceEEEcCCCccCCCCccccccccccceeccCC
Q 046199 496 NELSSFIPSTFWNLNNILSFDFSSNSLNGSLPLDIGNMKVVVEINLSR 543 (902)
Q Consensus 496 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (902)
..++.+...+|.++++|+.+.+..+ ++.+-...|.++.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455556667777777777766554 3333444555555555555443
No 463
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=30.32 E-value=64 Score=31.36 Aligned_cols=60 Identities=18% Similarity=0.067 Sum_probs=46.1
Q ss_pred ChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEe
Q 046199 808 SLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNILLDDDMVAHLSD 869 (902)
Q Consensus 808 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (902)
+|.+.+...+.++++++++.++.|.+.+|.-.-. ++.-..+=+.|..|++..+|.|...+
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc
Confidence 7999998889999999999999999999887621 11111333457889999999887653
No 464
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=20.81 E-value=8.8e+02 Score=26.81 Aligned_cols=147 Identities=16% Similarity=0.118 Sum_probs=94.6
Q ss_pred HHHHHhhcccccccCeecccceeeEEEEEeCCCcEEEEEEeeeccchh----hhhHHHHHHHHHhCCCCCccceeeee--
Q 046199 718 YRELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGA----LKSFDAECEVLKSVRHRNLVKIISSC-- 791 (902)
Q Consensus 718 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~-- 791 (902)
+..+....++| .+.-|--|.|..+-.-.+-+++.|+++...... .+..+.-....+ +|..|=++-+..
T Consensus 302 l~hl~~s~D~F----i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Ef 375 (578)
T 3eps_A 302 LVYLQGCNEQF----IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEF 375 (578)
T ss_dssp HHHHHTCCCCB----EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEE
T ss_pred HHHhccCchhE----EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhh
Confidence 34445555655 467888899998876678889999998653222 233333333333 344444443321
Q ss_pred ---------------------------ecCCeeEEEEEccC--CCChHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 046199 792 ---------------------------SNGNFKALVLEYMA--NGSLEKCLYSSNRSLDIFQRLSIMIDVALALEYLHFG 842 (902)
Q Consensus 792 ---------------------------~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 842 (902)
.+++...|--=|++ -..|.-++.+ .+.+++...+.+-..|++-|-
T Consensus 376 sn~~fp~~Rfs~eLL~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~----a~~~~~~~av~eYG~AIKqLA-- 449 (578)
T 3eps_A 376 ENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQ----VEGQQLRDAIEEYGNAIRQLA-- 449 (578)
T ss_dssp EEEEEEGGGBCHHHHHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHH----CCTHHHHHHHHHHHHHHHHHH--
T ss_pred hcccCchhhCCHHHHHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhh----CCHHHHHHHHHHHHHHHHHHH--
Confidence 12233222111221 1244445543 345677888899999999999
Q ss_pred CCCCeEEcCCCCCCEEEcCCCcEEEEeecCceecC
Q 046199 843 YSNPVVHCDIKPSNILLDDDMVAHLSDFGIAKLLN 877 (902)
Q Consensus 843 ~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 877 (902)
..+|.-+|.=-+|+=|+..|+|.--|+.=...+.
T Consensus 450 -aANIFPGDML~KNFGVTRhgRVVFYDYDEI~ylT 483 (578)
T 3eps_A 450 -AANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMT 483 (578)
T ss_dssp -HTTEECSCCCGGGEEECTTCCEEECCGGGCEEST
T ss_pred -HhcCCCcccccccCCccccceEEEecccceeeec
Confidence 9999999999999999999999999998665443
Done!