Query 046205
Match_columns 365
No_of_seqs 134 out of 1252
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 17:03:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7l_A 455AA long hypothetical 100.0 1E-64 3.5E-69 510.0 31.8 301 16-365 2-304 (455)
2 1wqa_A Phospho-sugar mutase; a 100.0 6.1E-64 2.1E-68 504.4 31.4 301 17-365 3-304 (455)
3 1tuo_A Putative phosphomannomu 100.0 6.9E-63 2.4E-67 497.6 31.0 299 13-365 8-310 (464)
4 3pdk_A Phosphoglucosamine muta 100.0 1.5E-62 5.2E-67 495.0 30.2 310 7-365 14-324 (469)
5 3i3w_A Phosphoglucosamine muta 100.0 3.2E-62 1.1E-66 489.8 27.7 296 16-365 2-300 (443)
6 3pmg_A Alpha-D-glucose-1,6-bis 100.0 1.2E-62 4.2E-67 505.2 23.7 341 6-365 3-353 (561)
7 3uw2_A Phosphoglucomutase/phos 100.0 1.2E-61 4E-66 489.8 28.0 297 9-364 18-324 (485)
8 1p5d_X PMM, phosphomannomutase 100.0 2.5E-61 8.7E-66 486.3 28.2 294 13-365 8-303 (463)
9 3na5_A Phosphoglucomutase; iso 100.0 3.5E-61 1.2E-65 495.0 27.9 326 5-365 42-392 (570)
10 1kfi_A Phosphoglucomutase 1; p 100.0 7.5E-61 2.5E-65 494.0 27.2 348 11-365 13-370 (572)
11 2z0f_A Putative phosphoglucomu 100.0 1.4E-58 5E-63 472.8 26.7 317 11-365 18-348 (524)
12 4hjh_A Phosphomannomutase; str 100.0 3.4E-55 1.2E-59 443.4 25.6 280 14-355 7-293 (481)
13 2dka_A Phosphoacetylglucosamin 100.0 3E-38 1E-42 323.6 15.4 272 14-365 19-365 (544)
14 2dka_A Phosphoacetylglucosamin 97.2 0.00032 1.1E-08 71.4 6.1 50 55-107 132-182 (544)
15 1o1x_A Ribose-5-phosphate isom 89.3 1.6 5.4E-05 36.5 8.3 33 56-90 13-45 (155)
16 2vvr_A Ribose-5-phosphate isom 86.3 2 6.9E-05 35.7 7.1 31 57-89 3-33 (149)
17 2vvp_A Ribose-5-phosphate isom 85.7 2.1 7.3E-05 36.1 7.1 32 57-90 5-36 (162)
18 3s5p_A Ribose 5-phosphate isom 84.6 2.4 8.1E-05 35.9 6.8 31 57-89 23-53 (166)
19 3he8_A Ribose-5-phosphate isom 84.4 4.2 0.00015 33.7 8.2 32 57-90 2-33 (149)
20 3ph3_A Ribose-5-phosphate isom 82.5 5.4 0.00018 33.8 8.2 33 56-90 21-53 (169)
21 3k7p_A Ribose 5-phosphate isom 72.1 9.8 0.00034 32.4 6.9 32 57-90 24-57 (179)
22 2ppw_A Conserved domain protei 70.2 10 0.00036 33.3 6.8 34 56-89 4-39 (216)
23 4dik_A Flavoprotein; TM0755, e 70.1 29 0.00098 33.4 10.7 76 39-122 250-326 (410)
24 4em8_A Ribose 5-phosphate isom 69.1 6.5 0.00022 32.5 5.0 33 56-90 8-40 (148)
25 2ehp_A AQ_1627 protein; putati 67.2 24 0.00082 27.2 7.3 112 22-180 12-123 (126)
26 2vvr_A Ribose-5-phosphate isom 66.8 12 0.00041 31.0 6.2 71 223-310 2-76 (149)
27 3sgw_A Ribose 5-phosphate isom 63.5 8.1 0.00028 33.1 4.6 31 57-89 31-63 (184)
28 3ono_A Ribose/galactose isomer 63.5 12 0.0004 32.9 5.8 30 57-89 5-39 (214)
29 3ph3_A Ribose-5-phosphate isom 62.2 15 0.00052 31.0 6.0 73 221-310 19-95 (169)
30 3s5p_A Ribose 5-phosphate isom 61.8 15 0.00051 30.9 5.9 75 221-310 20-96 (166)
31 3he8_A Ribose-5-phosphate isom 59.8 18 0.00063 29.8 6.0 71 223-310 1-75 (149)
32 2ppw_A Conserved domain protei 59.6 17 0.00059 31.9 6.2 77 222-310 3-85 (216)
33 3fni_A Putative diflavin flavo 58.4 54 0.0018 26.7 8.9 35 55-89 4-39 (159)
34 1ccw_A Protein (glutamate muta 57.8 29 0.00099 27.8 7.0 47 56-107 4-53 (137)
35 2i2x_B MTAC, methyltransferase 56.6 39 0.0013 30.2 8.3 59 55-126 123-185 (258)
36 1y80_A Predicted cobalamin bin 56.1 39 0.0013 28.9 8.0 58 55-124 88-148 (210)
37 3ezx_A MMCP 1, monomethylamine 55.4 83 0.0029 27.2 10.1 47 55-107 92-142 (215)
38 2yxb_A Coenzyme B12-dependent 53.3 36 0.0012 28.1 7.0 47 55-107 18-68 (161)
39 1o1x_A Ribose-5-phosphate isom 50.9 32 0.0011 28.5 6.1 75 221-310 11-87 (155)
40 3k7p_A Ribose 5-phosphate isom 48.4 37 0.0012 28.9 6.2 73 221-310 21-99 (179)
41 3q98_A Transcarbamylase; rossm 46.0 25 0.00084 33.9 5.4 68 54-127 190-260 (399)
42 2h54_A Caspase-1; allosteric s 44.4 78 0.0027 26.6 7.8 77 58-144 47-130 (178)
43 2j32_A Caspase-3; Pro-caspase3 43.1 96 0.0033 27.5 8.6 70 64-143 35-104 (250)
44 1zq6_A Otcase, ornithine carba 39.7 33 0.0011 32.5 5.1 49 53-101 188-239 (359)
45 2yfk_A Aspartate/ornithine car 39.0 35 0.0012 33.1 5.2 48 54-101 187-237 (418)
46 3sgw_A Ribose 5-phosphate isom 38.4 31 0.0011 29.5 4.2 76 221-310 28-107 (184)
47 3c5y_A Ribose/galactose isomer 38.0 69 0.0024 28.3 6.5 35 55-89 19-55 (231)
48 3hly_A Flavodoxin-like domain; 37.0 1.1E+02 0.0038 24.6 7.5 32 58-89 3-35 (161)
49 1m72_A Caspase-1; caspase, cys 36.1 1.4E+02 0.0048 26.8 8.6 66 58-126 36-109 (272)
50 2vvp_A Ribose-5-phosphate isom 34.5 32 0.0011 28.8 3.6 71 222-309 3-78 (162)
51 3ono_A Ribose/galactose isomer 32.5 71 0.0024 27.9 5.6 76 222-310 3-84 (214)
52 3bul_A Methionine synthase; tr 31.6 1E+02 0.0036 31.0 7.5 59 55-125 98-159 (579)
53 4a8t_A Putrescine carbamoyltra 31.2 60 0.002 30.5 5.3 64 54-127 174-237 (339)
54 4amu_A Ornithine carbamoyltran 30.3 70 0.0024 30.3 5.7 46 53-101 178-225 (365)
55 1f1j_A Caspase-7 protease; cas 30.1 1.1E+02 0.0037 28.1 6.9 76 58-143 73-157 (305)
56 4a8p_A Putrescine carbamoyltra 30.0 63 0.0022 30.5 5.3 64 54-127 152-215 (355)
57 4ep1_A Otcase, ornithine carba 29.8 61 0.0021 30.4 5.1 49 53-105 177-225 (340)
58 3tnj_A Universal stress protei 29.4 70 0.0024 24.8 4.9 41 55-98 6-46 (150)
59 1vlv_A Otcase, ornithine carba 27.4 90 0.0031 29.0 5.8 45 53-100 165-209 (325)
60 2i6u_A Otcase, ornithine carba 27.4 84 0.0029 29.0 5.6 45 53-100 146-190 (307)
61 1dxh_A Ornithine carbamoyltran 26.8 72 0.0025 29.8 5.0 44 54-100 154-197 (335)
62 1pvv_A Otcase, ornithine carba 26.4 83 0.0028 29.1 5.3 44 53-100 153-196 (315)
63 2dko_A Caspase-3; low barrier 26.3 2E+02 0.0069 23.1 7.2 82 63-158 34-115 (146)
64 1jmv_A USPA, universal stress 26.1 91 0.0031 23.8 5.0 34 56-89 3-36 (141)
65 3hgm_A Universal stress protei 25.7 52 0.0018 25.4 3.4 41 56-99 3-43 (147)
66 3gd5_A Otcase, ornithine carba 25.7 64 0.0022 30.0 4.5 45 53-101 155-199 (323)
67 4h31_A Otcase, ornithine carba 25.5 70 0.0024 30.2 4.7 65 54-127 180-244 (358)
68 1nw9_B Caspase 9, apoptosis-re 25.0 1.8E+02 0.0062 26.0 7.4 61 64-127 40-100 (277)
69 3sz8_A 2-dehydro-3-deoxyphosph 24.9 1.1E+02 0.0037 27.9 5.7 41 222-264 195-252 (285)
70 3grf_A Ornithine carbamoyltran 24.6 92 0.0031 29.0 5.3 50 54-106 160-211 (328)
71 3s3t_A Nucleotide-binding prot 24.5 56 0.0019 25.2 3.4 34 56-89 6-39 (146)
72 1duv_G Octase-1, ornithine tra 24.3 81 0.0028 29.5 4.9 44 54-100 154-197 (333)
73 1qtn_A Caspase-8; apoptosis, d 24.0 2.5E+02 0.0085 23.1 7.5 74 64-147 49-122 (164)
74 1ycg_A Nitric oxide reductase; 23.9 3.8E+02 0.013 24.5 9.8 35 55-89 251-286 (398)
75 1q77_A Hypothetical protein AQ 23.6 71 0.0024 24.4 3.8 39 56-97 5-44 (138)
76 1xrs_B D-lysine 5,6-aminomutas 23.1 1.3E+02 0.0045 27.0 5.9 47 55-107 120-179 (262)
77 3fdx_A Putative filament prote 22.6 75 0.0026 24.3 3.8 40 56-98 2-43 (143)
78 4em8_A Ribose 5-phosphate isom 21.4 95 0.0032 25.5 4.1 72 223-310 8-81 (148)
79 3e4c_A Caspase-1; zymogen, inf 21.3 2E+02 0.0068 26.3 6.9 76 58-143 64-146 (302)
80 2w37_A Ornithine carbamoyltran 21.3 97 0.0033 29.3 4.8 45 53-100 174-218 (359)
81 3tpf_A Otcase, ornithine carba 21.1 99 0.0034 28.5 4.7 43 55-101 146-188 (307)
82 4ehd_A Caspase-3; caspase, apo 20.8 2.6E+02 0.009 25.0 7.5 70 64-143 63-132 (277)
83 2xij_A Methylmalonyl-COA mutas 20.7 4.2E+02 0.014 27.6 9.8 47 55-107 604-654 (762)
84 2ohh_A Type A flavoprotein FPR 20.7 3.4E+02 0.012 24.9 8.7 35 55-89 256-291 (404)
85 3c5y_A Ribose/galactose isomer 20.6 1.1E+02 0.0039 26.9 4.7 75 221-309 18-100 (231)
86 2q62_A ARSH; alpha/beta, flavo 20.1 2.3E+02 0.008 24.8 6.9 32 58-89 38-71 (247)
87 1zco_A 2-dehydro-3-deoxyphosph 20.1 1.5E+02 0.005 26.6 5.6 57 222-282 192-256 (262)
88 1pyo_A Caspase-2; apoptosis, c 20.0 2.4E+02 0.0084 23.2 6.6 83 64-159 52-135 (167)
No 1
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-64 Score=510.02 Aligned_cols=301 Identities=21% Similarity=0.247 Sum_probs=269.3
Q ss_pred CCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcc
Q 046205 16 GQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLL 95 (365)
Q Consensus 16 ~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ 95 (365)
+.+|||+||||+++.++||+++.++++|+|+++. ++++|+||||+|.+|++|+++++++|+++|++|+++ |.+
T Consensus 2 ~~~Fgt~GiRG~~~~~lt~~~v~~~~~a~~~~l~----~~~~VvIG~D~R~ss~~~~~a~a~gl~~~G~~V~~~---g~~ 74 (455)
T 2f7l_A 2 GKLFGTDGVRGIVNKELTPELVLKLSKAIGTFFG----KNSKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDG---GMA 74 (455)
T ss_dssp CSSCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHC----TTCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE---EEC
T ss_pred CCcccCCCeeeecCCCcCHHHHHHHHHHHHHHHc----cCCeEEEEECCCCCHHHHHHHHHHHHHHCCCcEEEc---CCC
Confidence 3689999999999999999999999999999997 346899999999999999999999999999999999 999
Q ss_pred cchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCCCccc
Q 046205 96 STPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLPDVDI 175 (365)
Q Consensus 96 ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~ 175 (365)
|||+++|+++++ +|++|||||||||| ++||||||++++|.+++++.+++|++.+++ + ++++..+
T Consensus 75 pTP~~~~av~~~------~~~~GImITASHNP---~~~NGiK~~~~~G~~~~~~~~~~I~~~~~~-~------~~~~~~~ 138 (455)
T 2f7l_A 75 PTPALQYAVKTL------GYDGGVVITASHNP---APYNGIKVVDKDGIEIRREKENEIEDLFFT-E------RFNTIEW 138 (455)
T ss_dssp CHHHHHHHHHHH------CCSEEEEECCTTSC---TTEEEEEEECTTSSBCCHHHHHHHHHHHHH-T------CCCCCCG
T ss_pred CcHHHHHHHHhc------CCCeEEEEEcCCCC---hHHCEEEEECCCCCCCCHHHHHHHHHHHhc-C------CCCcCch
Confidence 999999999999 99999999999999 899999999999999999999999999865 2 4444444
Q ss_pred cccc-ccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCCceeeee
Q 046205 176 SAVG-VTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESSLL 254 (365)
Q Consensus 176 ~~~g-~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~~v~~~~ 254 (365)
+.+| .+ ....+..+.|++++.+.++.+.|+. +++|||+||+||+++.+++++ |++|||+++ .+
T Consensus 139 ~~~g~~~----------~~~~~~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~~G~~~~~~~~~-l~~lG~~v~-~~ 202 (455)
T 2f7l_A 139 SSLTTEV----------KREDRVISTYVNGILSHVDIEKIKK----KNYKVLIDPANSVGALSTPLV-ARALGCKIY-TI 202 (455)
T ss_dssp GGCCCCC----------EECCCHHHHHHHHHHTTSCHHHHHH----HCCEEEEECTTTGGGGTHHHH-HHHTTCEEE-EB
T ss_pred hcCCcee----------ecccchHHHHHHHHHhhcChhhccc----CCCEEEEECCCchHHHHHHHH-HHHcCCEEE-EE
Confidence 4454 32 1245789999999999999876764 589999999999999999999 799999987 59
Q ss_pred ccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHHHHHhcCc
Q 046205 255 NCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAANAVESIP 333 (365)
Q Consensus 255 ~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~~ll~~~~ 333 (365)
+++|||.||+++|||+.+++..+.+.++ +.++|+|+++||||||++++| +|+++++++.++|+++|++++.+
T Consensus 203 ~~~pDg~F~~~~p~p~~~~l~~l~~~v~-------~~~adlgia~DgDaDR~~~vd~~g~~l~gd~i~~lla~~l~~~~~ 275 (455)
T 2f7l_A 203 NGNLDPLFSARQPEPTFDSLKETAEVVK-------TLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVKNP 275 (455)
T ss_dssp SCSCCTTCTTSCSSCCTTTSHHHHHHHH-------HTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHTCT
T ss_pred CCcCCCCCCCCCcCcchHHHHHHHHHHH-------HcCCCEEEEECCCCCeEEEEcCCCeEEChHHHHHHHHHHHHHhCc
Confidence 9999999999999999889999999998 889999999999999999999 59999988888899999987531
Q ss_pred ccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 334 YFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 334 ~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
. + ...||.|++||.+++++|+++|+++++
T Consensus 276 ~--~-~~~vv~tv~ss~~l~~~a~~~g~~~~~ 304 (455)
T 2f7l_A 276 K--A-IKKIVTAVSSSSLVEEYLSKYNIQVDW 304 (455)
T ss_dssp T--S-CSEEEEETTSCTHHHHHHHTTTCEEEE
T ss_pred c--C-CCeEEEEecccHHHHHHHHHcCCEEEE
Confidence 1 1 246999999999999999999999864
No 2
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.1e-64 Score=504.37 Aligned_cols=301 Identities=26% Similarity=0.310 Sum_probs=269.0
Q ss_pred CcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCccc
Q 046205 17 QKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLS 96 (365)
Q Consensus 17 ~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~p 96 (365)
.+|||+||||+++.++||+++.++++|+|+++..+.....+|+||||+|.+|++|+++++++|+++|++|+++ |.+|
T Consensus 3 ~~Fgt~GiRG~~~~~lt~~~v~~~~~a~~~~l~~~~~~~~~VvIG~D~R~ss~~l~~a~~~gl~~~G~~V~~~---g~~p 79 (455)
T 1wqa_A 3 KLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDV---GIAP 79 (455)
T ss_dssp TTCBTTBEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE---EECC
T ss_pred cccCCCceeeecCCCcCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCcCHHHHHHHHHHHHHHcCCeEEEe---CCCC
Confidence 4799999999999999999999999999999975322235699999999999999999999999999999999 9999
Q ss_pred chHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCCCcccc
Q 046205 97 TPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLPDVDIS 176 (365)
Q Consensus 97 tP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~ 176 (365)
||+++|+++++ ++++|||||||||| ++||||||++++|.+++++.+++|++.+.+ + ++++..++
T Consensus 80 TP~l~~~v~~~------~~~~GimITASHNP---~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~-~------~~~~~~~~ 143 (455)
T 1wqa_A 80 TPAVQWATKHF------NADGGAVITASHNP---PEYNGIKLLEPNGMGLKKEREAIVEELFFK-E------DFDRAKWY 143 (455)
T ss_dssp HHHHHHHHHHT------TCSEEEEECCTTSC---TTEEEEEEECTTSSBCCHHHHHHHHHHHHH-T------CCCCCCGG
T ss_pred hHHHHHHHHhc------CCCEEEEEEeCCCC---hHHCeEEEEcCCCCcCCHHHHHHHHHHHhc-C------CcccCCcc
Confidence 99999999999 99999999999999 899999999999999999999999999865 2 34444444
Q ss_pred cccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCCceeeeecc
Q 046205 177 AVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESSLLNC 256 (365)
Q Consensus 177 ~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~~v~~~~~~ 256 (365)
.+|. +...+..+.|++++.+.++.+.|+. +++|||+||+||+++.+++++ |++|||+++ .+|+
T Consensus 144 ~~g~-----------~~~~~~~~~Y~~~l~~~~~~~~~~~----~~lkivvd~~nG~~~~~~~~~-l~~lG~~v~-~~~~ 206 (455)
T 1wqa_A 144 EIGE-----------VRREDIIKPYIEAIKSKVDVEAIKK----RKPFVVVDTSNGAGSLTLPYL-LRELGCKVI-TVNA 206 (455)
T ss_dssp GCCC-----------EEECCCHHHHHHHHHTTSCHHHHHH----HCCEEEEECTTSGGGGTHHHH-HHHHTCEEE-EESC
T ss_pred CCcc-----------eeccchHHHHHHHHHhhCChhhccc----CCCEEEEECCCccHHHHHHHH-HHHcCCEEE-EECC
Confidence 4543 2356889999999999999876664 589999999999999999999 799999987 5899
Q ss_pred ccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHHHHHhcCccc
Q 046205 257 TPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAANAVESIPYF 335 (365)
Q Consensus 257 ~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~~ll~~~~~~ 335 (365)
+|||.||++.|+|..+++..+.+.++ +.++|+|+++||||||++++| +|+++++++.++|+++|++++.
T Consensus 207 ~pdg~f~~~~~~p~~~~l~~l~~~v~-------~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~--- 276 (455)
T 1wqa_A 207 QPDGYFPARNPEPNEENLKEFMEIVK-------ALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEK--- 276 (455)
T ss_dssp SCCTTCSSSCSCCCTTTTHHHHHHHH-------HHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHH---
T ss_pred cCCCCCCCCCCCCchhHHHHHHHHHH-------HcCCCEEEEECCCCCeEEEEeCCCCEEChhHHHHHHHHHHHHhC---
Confidence 99999999999998889999999998 889999999999999999999 5999998888889999988742
Q ss_pred ccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 336 SAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 336 ~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
++ ..||.|++||.+++++|+++|+++++
T Consensus 277 -~~-~~vv~tv~ss~~l~~~a~~~g~~~~~ 304 (455)
T 1wqa_A 277 -GG-GLLVTTVATSNLLDDIAKKHGAKVMR 304 (455)
T ss_dssp -TS-CEEEEETTSCTHHHHHHHHTTCEEEE
T ss_pred -CC-CeEEEeecCcHHHHHHHHHCCCEEEE
Confidence 22 47999999999999999999999864
No 3
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=6.9e-63 Score=497.59 Aligned_cols=299 Identities=23% Similarity=0.339 Sum_probs=265.1
Q ss_pred CCCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEE-EeCC
Q 046205 13 PIDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRV-WIGQ 91 (365)
Q Consensus 13 ~~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~-~~~~ 91 (365)
+..+++|||+||||+++.++|++++.++++|+|+++..++ +++|+||||+|.+|++|+++++++|+++|++|+ +.
T Consensus 8 ~~~~l~FGt~GiRG~~~~~lt~~~v~~~~~a~~~~l~~~~--~~~VvVG~D~R~ss~~~~~a~a~gl~~~G~~V~~~~-- 83 (464)
T 1tuo_A 8 MSAPIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLERG--GGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLK-- 83 (464)
T ss_dssp CCCCCCCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHTT--CCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEES--
T ss_pred ccCCccccCCCcceecCCCcCHHHHHHHHHHHHHHHHHhC--CCeEEEeeCCCCCHHHHHHHHHHHHHHCCCeEEEcC--
Confidence 4468999999999999999999999999999999997532 468999999999999999999999999999997 56
Q ss_pred CCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCC
Q 046205 92 NGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLP 171 (365)
Q Consensus 92 ~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~ 171 (365)
|.+|||+++|+++++ ++++|||||||||| ++||||||++++|.+++++.+++||+.++ +
T Consensus 84 -g~~pTP~~~~av~~~------~~~~GImITASHNP---~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~--~--------- 142 (464)
T 1tuo_A 84 -GPVPTPLLSFAVRHL------KAAGGAMLTASHNP---PQYLGVKFKDATGGPIAQEEAKAIEALVP--E--------- 142 (464)
T ss_dssp -SSCCHHHHHHHHHHT------TCSEEEEECCTTSC---TTEEEEEEEETTTEECCHHHHHHHHHTCC--S---------
T ss_pred -CCCCHHHHHHHHHHh------CCCceEEEcCCCCC---chHCCEEEEcCCCCcCChHHHHHHHHHhc--C---------
Confidence 999999999999999 99999999999999 89999999999999999999999998864 1
Q ss_pred CcccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCC--c
Q 046205 172 DVDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGA--Q 249 (365)
Q Consensus 172 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~--~ 249 (365)
..+...|. +...+..+.|++++.+.++.+.|+. +++|||+||+||+++.+++++ |++||| +
T Consensus 143 -~~~~~~g~-----------~~~~d~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~nG~~~~~~~~~-l~~lG~~~~ 205 (464)
T 1tuo_A 143 -EARALEGA-----------YETLDLREAYFEALKAHLDLKALSG----FSGVLYHDSMGGAGAGFLKGF-LRHVGLEIP 205 (464)
T ss_dssp -CCCCCCCC-----------CEEECCHHHHHHHHHTTSCHHHHTT----CCSCEEEECTTSTTTTHHHHH-HHHTTCCCC
T ss_pred -CccccCCc-----------eEEcCcHHHHHHHHhhhcChhhccc----cCCEEEEECCCCcHHHHHHHH-HHHCCCCce
Confidence 01122332 2345889999999999999877764 699999999999999999999 799999 8
Q ss_pred eeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHHHH
Q 046205 250 ESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAANA 328 (365)
Q Consensus 250 v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~~l 328 (365)
++ .+|++|||+||+++|||+.+++.+|.+.|+ ++.++|+|+++||||||++++| +|+++++++.++|++.|+
T Consensus 206 v~-~~~~~pDg~Fp~~~p~p~~~~~~~l~~~v~------~~~~adlgia~DgDaDR~~vvd~~G~~l~gd~i~~Lla~~l 278 (464)
T 1tuo_A 206 VR-PIREEPHPLFHGVNPEPIPKNLGVTLAVLG------PETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYR 278 (464)
T ss_dssp EE-EESCSCCTTGGGSCSCCSGGGCHHHHHHHT------TCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHH
T ss_pred EE-EEecccCCCCCCCCcCCCchhHHHHHHHHH------hccCCCEEEEECCCCCeEEEEeCCCEEECHHHHHHHHHHHH
Confidence 76 499999999999999999999999999985 1568999999999999999999 599999888888999998
Q ss_pred HhcCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 329 VESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 329 l~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
++. .. ...||.|++||.+++++|+++|+++++
T Consensus 279 ~~~----~~-~~~vv~tv~ss~~l~~~a~~~g~~~~~ 310 (464)
T 1tuo_A 279 FRK----GH-RGRAVKNFAVTWLLDRLGERLGFGVTT 310 (464)
T ss_dssp HHT----TC-CSEEEEETTSCTHHHHHHHHHTCCEEE
T ss_pred Hhh----CC-CCeEEEeecchHHHHHHHHHcCCeEEE
Confidence 873 12 247999999999999999999999864
No 4
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-62 Score=494.97 Aligned_cols=310 Identities=18% Similarity=0.223 Sum_probs=259.6
Q ss_pred hhhhhCCCCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEE
Q 046205 7 TRKETAPIDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRR 86 (365)
Q Consensus 7 ~~~~~~~~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V 86 (365)
+-|-+..+++.+|||+||||++|.++||+++.++++|+|+++.++. .+++|+||||+|.+|++|+++++++|+++|++|
T Consensus 14 ~~~~~~~~m~~~FGt~GiRG~~~~~lt~~~v~~~g~a~~~~l~~~~-~~~~VvIG~D~R~ss~~~~~a~a~gl~s~Gi~V 92 (469)
T 3pdk_A 14 TSLYKKAGMGKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDT-DRPKVIIGRDTRISGHMLEGALVAGLLSTGAEV 92 (469)
T ss_dssp ---------CCSCBTTBEEEEBTTTBCHHHHHHHHHHHHHHHHTTC-SSCEEEEEECSCTTHHHHHHHHHHHHHTTTCEE
T ss_pred hhhhhhcCcccccCCCCeeeecCCCCCHHHHHHHHHHHHHHHHhhC-CCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCEE
Confidence 3456667788899999999999999999999999999999997422 356899999999999999999999999999999
Q ss_pred EEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhc
Q 046205 87 VWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSI 166 (365)
Q Consensus 87 ~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~ 166 (365)
+++ |.+|||+++|+++++ ++++|||||||||| ++||||||++++|.+++++.+++|++.+++..
T Consensus 93 ~~~---g~~pTP~l~fav~~~------~a~~GImITASHNP---~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~~---- 156 (469)
T 3pdk_A 93 MRL---GVISTPGVAYLTKAL------DAQAGVMISASHNP---VQDNGIKFFGSDGFKLTDEQEAEIEALLDKEV---- 156 (469)
T ss_dssp EEE---EECCHHHHHHHHHHH------TCSEEEEECCTTSC---TTEEEEEEEETTSSBCCHHHHHHHHHHHHSSS----
T ss_pred EEe---CCCChHHHHHHHHhc------CCCeEEEEEeCCCc---chhCcEEEecCCCcCCCHHHHHHHHHHHhccc----
Confidence 999 999999999999999 99999999999999 89999999999999999999999999986510
Q ss_pred cCCCCCcccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHc
Q 046205 167 AEDLPDVDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEEL 246 (365)
Q Consensus 167 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~l 246 (365)
+++++..+..+|.+ ....+..+.|++++.+.++. ..+++|||+||+||+++.+++++ |++|
T Consensus 157 -~~~~~~~~~~~g~~----------~~~~d~~~~Y~~~l~~~~~~-------~~~~lkivvD~~nG~~~~~~~~l-l~~l 217 (469)
T 3pdk_A 157 -DELPRPTGTNLGQV----------SDYFEGGQKYLQYIKQTVEE-------DFSGLHIALDCAHGATSSLAPYL-FADL 217 (469)
T ss_dssp -CCSCCCCGGGSCCE----------EECTHHHHHHHHHHHTTCSS-------CCTTCEEEEECTTSTTTTHHHHH-HHHT
T ss_pred -cccCccccccCccE----------EEcccHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchHHHHHHHH-HHHc
Confidence 13444444455543 12357899999999998873 13689999999999999999999 7999
Q ss_pred CCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHH
Q 046205 247 GAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIA 325 (365)
Q Consensus 247 g~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~ 325 (365)
||+++ .+|++|||.||+..|.| +++.++.+.++ +.+||+|+++||||||++++| +|+++++++.++|++
T Consensus 218 G~~v~-~l~~~pDg~f~n~~~~~--~~~~~l~~~v~-------~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~Lla 287 (469)
T 3pdk_A 218 EADIS-TMGTSPNGMNINDGVGS--THPEVLAELVK-------EKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICA 287 (469)
T ss_dssp TCEEE-EESCCCCSSCTTSSCST--TSTHHHHHHHH-------HHTCSEEEEECTTSSBEEEEETTSCEECHHHHHHHHH
T ss_pred CCEEE-EECCCcCCCCCCCCCCC--CCHHHHHHHHH-------hcCCcEEEEECCCCCeEEEECCCCcEEChhHHHHHHH
Confidence 99987 59999999998655444 45566777777 789999999999999999999 599999888888888
Q ss_pred HHHHhcCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 326 ANAVESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 326 ~~ll~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
.+++++.+ + ++ ..||.|+.||.+++++|+++|+++++
T Consensus 288 ~~l~~~~~-l-~~-~~vv~tv~ss~~l~~~~~~~G~~~~~ 324 (469)
T 3pdk_A 288 KYMKETGQ-L-KH-NTVVSTVMSNLGFYKALEANGITSDK 324 (469)
T ss_dssp HHHHHTTC-S-GG-GEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCC-C-CC-CeEEEeecCcHHHHHHHHHcCCEEEE
Confidence 89887421 1 12 46999999999999999999999863
No 5
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=3.2e-62 Score=489.78 Aligned_cols=296 Identities=17% Similarity=0.230 Sum_probs=255.6
Q ss_pred CCcCCCCCccccccc-ccchHHHHHHHHHHHHHhhhcccCCC-eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCC
Q 046205 16 GQKPGTSGLRKKVKV-FTQPNYLHNFVQSTFNALSAEKVRGA-TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNG 93 (365)
Q Consensus 16 ~~~Fgt~GiRG~~~~-~~~~~~~~~l~~a~g~~l~~~~~~~~-~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g 93 (365)
+.+|||+||||+++. ++||+++.++++|+|+++.+++ .+ +|+||||+|.+|++|+++++++|.++|++|+++ |
T Consensus 2 ~~~FGt~GiRG~~~~g~lt~~~v~~~g~a~~~~l~~~~--~~~~VvVG~D~R~ss~~l~~a~~~gl~s~G~~V~~~---g 76 (443)
T 3i3w_A 2 AKYFGTDGIRGEVANSTITVEFTQKLGNAVGSLINQKN--YPKFVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDL---G 76 (443)
T ss_dssp -CCCCSSSSEEEBSSSSBSHHHHHHHHHHHHHHHHHTT--CCSEEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEE---E
T ss_pred CcccCCCCeeEEeCCCCCCHHHHHHHHHHHHHHHHhcC--CCCeEEEEeCCCcCHHHHHHHHHHHHHHCCCeEEEe---C
Confidence 468999999999999 9999999999999999997532 34 799999999999999999999999999999999 9
Q ss_pred cccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCCCc
Q 046205 94 LLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLPDV 173 (365)
Q Consensus 94 ~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~ 173 (365)
.+|||+++|+++++ ++++|||||||||| ++||||||++++|.+++++.+++|++.+.+ ++++.
T Consensus 77 ~~pTP~~~~av~~~------~a~~GImITASHNP---~~~NGiK~~~~~G~~l~~~~~~~Ie~~~~~--------~~~~~ 139 (443)
T 3i3w_A 77 VVPTPVVAFMTVKH------RAAAGFVITASHNK---FTDNGIKLFSSNGFKLDDALEEEVEDMIDG--------DFIYQ 139 (443)
T ss_dssp ECCHHHHHHHHHHT------TCSEEEEECCTTSC---TTEEEEEEEETTSCBCCHHHHHHHHHHHTS--------CCCCC
T ss_pred CCCHHHHHHHHHhc------CCCeEEEEEECCCC---chhCeEEEEcCCCCcCCHHHHHHHHHHHhc--------ccccc
Confidence 99999999999999 99999999999999 899999999999999999999999998754 33333
Q ss_pred ccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCCceeee
Q 046205 174 DISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESSL 253 (365)
Q Consensus 174 ~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~~v~~~ 253 (365)
.+..+|.+ ....+..+.|++++.+.++. .|+ .++ |||+||+||+++.+++++ |++|||+++ .
T Consensus 140 ~~~~~g~~----------~~~~d~~~~Y~~~l~~~~~~-~i~----~~~-kivvD~~nG~~~~~~~~l-l~~lG~~v~-~ 201 (443)
T 3i3w_A 140 PQFKFGSY----------KILANAIDEYIESIYSRFAK-FVN----YKG-KVVVDCAHGAASHNFEAL-LDKFGINYV-S 201 (443)
T ss_dssp TTSCCCCE----------EECTTTTHHHHHHHHHHHTT-TCC----CCS-EEEEECTTSTTTTHHHHH-HHHTTCEEE-E
T ss_pred ccccCccE----------EEChhHHHHHHHHHHHhCch-hhc----cCC-eEEEECCCChHHHHHHHH-HHHcCCEEE-E
Confidence 34445543 12347899999999998762 122 367 999999999999999999 799999987 5
Q ss_pred eccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHHHHHhcC
Q 046205 254 LNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAANAVESI 332 (365)
Q Consensus 254 ~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~~ll~~~ 332 (365)
+|++|||.||+..|+|. ++..+.+.++ +.+||+|+++||||||++++| +|+++++++.++|++.+++++
T Consensus 202 ~~~~pDg~f~n~~~~~~--~~~~l~~~v~-------~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~- 271 (443)
T 3i3w_A 202 IASNPDGLNINVGCGAT--CVSNIKKAVK-------EQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDIC- 271 (443)
T ss_dssp SSCCCCSSCTTTTCSTT--CHHHHHHHHH-------HHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTT-
T ss_pred ECCccCCCCCCCCCCCC--CHHHHHHHHH-------hcCCcEEEEECCCCceEEEECCCCcEeChhHHHHHHHHHHHHh-
Confidence 99999999987766654 5566777787 789999999999999999999 599999887878888888764
Q ss_pred cccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 333 PYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 333 ~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
.+. ..||.|+.||..++++++++|+++++
T Consensus 272 ---~~~-~~vv~tv~ss~~l~~~~~~~G~~~~~ 300 (443)
T 3i3w_A 272 ---GGT-NGIVGTQMTNMSYENHYRANKIPFIR 300 (443)
T ss_dssp ---TCC-SCEEEETTSCHHHHHHHHHTTCCEEE
T ss_pred ---CCC-CeEEEeecCchHHHHHHHHCCCeEEE
Confidence 122 46999999999999999999999863
No 6
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=1.2e-62 Score=505.22 Aligned_cols=341 Identities=55% Similarity=0.901 Sum_probs=278.6
Q ss_pred hhhhhhCCCCCCcCCCCCccccccc-----ccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHH
Q 046205 6 VTRKETAPIDGQKPGTSGLRKKVKV-----FTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAA 80 (365)
Q Consensus 6 ~~~~~~~~~~~~~Fgt~GiRG~~~~-----~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~ 80 (365)
.+.+.+......+|||+||||++|+ .+||+|+.+++.|++..+. ++++|+||||+|++|++++++++++|+
T Consensus 3 ~~~~~~~~~~~~~fGTsGiRG~v~~~~~~~~~t~~f~~~l~~A~g~~~~----~g~~VvVG~D~R~~s~~~~~~~a~~l~ 78 (561)
T 3pmg_A 3 IVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQR----QEATLVVGGDGRFYMKEAIQLIVRIAA 78 (561)
T ss_dssp CEEEECCCCSCCCCBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGT----TTCEEEEEECCCTTHHHHHHHHHHHHH
T ss_pred ceEEecccCCCCCCCCCCcCeeeCCCCCCcCccHHHHHHHHHHHHhhhc----CCCEEEEEeCCCccHHHHHHHHHHHHH
Confidence 4456778888999999999999987 5788888888887775554 456899999999999999999999999
Q ss_pred HcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhh
Q 046205 81 ANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKT 160 (365)
Q Consensus 81 s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~ 160 (365)
++|++|++++++|.+|||+++|+++++ ++++||||||||||+++++||||||++++|.+++++.+++|++++++
T Consensus 79 a~Gv~V~~~~~~g~~pTP~vs~av~~~------~a~gGImITASHNP~~~~~~nGiK~~~~~G~~~~~~~~~~Ie~~~~~ 152 (561)
T 3pmg_A 79 ANGIGRLVIGQNGILSTPAVSCIIRKI------KAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKT 152 (561)
T ss_dssp HTTCCEEEEEEEEECCHHHHHHHHHHH------TCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHH
T ss_pred HCCCEEEEecCCCccCHHHHHHHHHHh------cCCeEEEEEeCCCCCCCCCcceEEEEeCCCCcCCHHHHHHHHHHHHh
Confidence 999999998545899999999999999 99999999999999654569999999999999999999999999877
Q ss_pred hhhhhccCCCCCcccccccccccCCCC--CCccceeccchHHHHHHHHhhcCHHHHHhhc-CCCCceEEEecCCCCcHHH
Q 046205 161 IKEYSIAEDLPDVDISAVGVTSFGGPE--GQFDVEVFDSASDYVKLMKSIFDFELIRKLL-SSPKFTFCYDALHGVAGAY 237 (365)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~-~~~~~kvvvd~~~Ga~~~~ 237 (365)
++++... ...+.+++++|+..+.... +...+...|..+.|++++.+.+|.+.|++++ ..+++|||+||+||+++.+
T Consensus 153 i~~~~~~-~~~~~~~~~ig~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~~d~~~i~~~~~~~~~lkIvvD~~~Ga~~~~ 231 (561)
T 3pmg_A 153 IEEYAIC-PDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPY 231 (561)
T ss_dssp CCEEEEC-TTCCCCTTSCEEEEECCTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEEECTTSTTHHH
T ss_pred hhhhccc-cccccchhhhccccccccccccCCceEecChHHHHHHHHHHhcChHHhhhhhccCCCcEEEEECCCCchHHH
Confidence 5433211 0012334445432210000 1112345678899999999999998887532 1258999999999999999
Q ss_pred HHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeC
Q 046205 238 AKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVT 316 (365)
Q Consensus 238 ~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~ 316 (365)
++++|+++|||+++.++|+.||++||+++|+|+.+++.+|.+.|+ +.++|+|+++||||||++++| +|++++
T Consensus 232 ~~~il~~~lG~~v~~~v~~~pd~~F~~~~P~P~~~~~~~L~~~v~-------~~~aDlgia~DgDaDR~~ivd~~G~~v~ 304 (561)
T 3pmg_A 232 VKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK-------SGEHDFGAAFDGDGDRNMILGKHGFFVN 304 (561)
T ss_dssp HHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTTTHHHHHHHH-------TSCCSEEEEECTTSSCEEEEEGGGCBCC
T ss_pred HHHHHHHHcCCCeEEEECCEECCCCCCCCCCCChHHHHHHHHHHH-------hcCCCEEEEEcCCCCeEEEEeCCCcEEC
Confidence 999834899999853489999999999999999999999999998 889999999999999999999 489999
Q ss_pred CCchHHHHHHHHHhcCcccc-cCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 317 PSDSVAIIAANAVESIPYFS-AGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 317 ~~~~lall~~~ll~~~~~~~-~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
+++.+++++.|++.. ++|. ++...||.|++||.+++++|+++|++|+|
T Consensus 305 ~~~~lalla~~l~~~-~~~~~~~~~~vv~tv~Ss~~ld~va~~~G~~v~~ 353 (561)
T 3pmg_A 305 PSDSVAVIAANIFSI-PYFQQTGVRGFARSMPTSGALDRVANATKIALYE 353 (561)
T ss_dssp HHHHHHHHHHTGGGS-HHHHHHCCCCEEEETTSCTHHHHHHHTSSSCEEE
T ss_pred ccHHHHHHHHHHHhh-hhhHhcCCCeEEEEechHHHHHHHHHHcCCCEEE
Confidence 999999999887531 1111 22246999999999999999999999874
No 7
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=1.2e-61 Score=489.83 Aligned_cols=297 Identities=21% Similarity=0.307 Sum_probs=261.3
Q ss_pred hhhCCCCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEE
Q 046205 9 KETAPIDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVW 88 (365)
Q Consensus 9 ~~~~~~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~ 88 (365)
=.+..+.+.+|||+||||++|+++|++++.++++|+|+++..+ .+++|+||||+|.+|++|+++++++|+++|++|++
T Consensus 18 ~~~~~~~~~~Fgt~GiRG~~~~~lt~~~~~~ig~A~~~~l~~~--~~~~VvVG~D~R~ss~~~~~a~a~gl~a~Gi~V~~ 95 (485)
T 3uw2_A 18 GPGSMISQSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQ--GGDAVVVARDGRLSGPELVGALADGLRAAGVDVVD 95 (485)
T ss_dssp ----CCCGGGBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEE
T ss_pred CccccccccccccCCEEEEeCCCCCHHHHHHHHHHHHHHHHHc--CCCEEEEEECCCcCHHHHHHHHHHHHHHCCCEEEE
Confidence 3455678899999999999999999999999999999999743 34689999999999999999999999999999999
Q ss_pred eCCCCcccchHHHHHHH--------HhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhh
Q 046205 89 IGQNGLLSTPAVSAVIR--------ERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKT 160 (365)
Q Consensus 89 ~~~~g~~ptP~~~~av~--------~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~ 160 (365)
+ |.+|||+++|+++ ++ ++++|||||||||| ++||||||++ +|.+++++.+++|++.+.+
T Consensus 96 ~---g~~pTP~l~~av~~~~~~~~~~~------~~~~GImITASHNP---~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~ 162 (485)
T 3uw2_A 96 V---GMVPTPVGYFAASVPLALSGGER------RVDSCIVVTGSHNP---PDYNGFKMVL-RGAAIYGDQIQGLYKRIVD 162 (485)
T ss_dssp E---EECCHHHHHHHTTSCEEETTEEE------CCCCEEEECCTTSC---TTEEEEEEEE-TTEECCTHHHHHHHHHHHT
T ss_pred e---CCCChHHHHHHHhcccccccccc------CCCeEEEEEeCCCC---cccceEEEec-CCCCCCHHHHHHHHHHHhc
Confidence 9 9999999999999 88 89999999999999 8999999998 7999999999999998754
Q ss_pred hhhhhccCCCCCcccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHH
Q 046205 161 IKEYSIAEDLPDVDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKR 240 (365)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~ 240 (365)
+ ++++ ..|. +...+..+.|++++.+.++. .+++|||+||+||+++.++++
T Consensus 163 -~------~~~~----~~g~-----------~~~~d~~~~Yi~~l~~~i~~--------~~~lkIvvD~~~Ga~~~~~~~ 212 (485)
T 3uw2_A 163 -A------RFET----GSGS-----------YEQYDVADQYVERIVGDIKL--------TRPLKLVVDAGNGVAGPLATR 212 (485)
T ss_dssp -T------CCCC----CCCC-----------EEECCCHHHHHHHHHTTCCC--------SSCCCEEEECTTSTHHHHHHH
T ss_pred -C------Cccc----CCce-----------EEecchHHHHHHHHHHhcCc--------ccCCEEEEEcCCCcHHHHHHH
Confidence 1 2322 1232 33468899999999998874 157999999999999999999
Q ss_pred HHHHHcCCceeeeeccccCCCCCCCCCCCCh-hcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCC
Q 046205 241 IFVEELGAQESSLLNCTPKEDFGGGHPDPNL-TYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPS 318 (365)
Q Consensus 241 i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~-~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~ 318 (365)
+ |++|||+++ .+++.|||+||++.|+|+. +++.++.+.|+ +.+||+|+++||||||++++| +|++++++
T Consensus 213 i-l~~lG~~v~-~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~v~-------~~~aDlgia~DgDaDR~~vvd~~G~~i~gd 283 (485)
T 3uw2_A 213 L-FKALGCELV-ELFTDIDGNFPNHHPDPAHPENLQDVIAKLK-------ATDAEIGFAFDGDGDRLGVVTKDGQIIYPD 283 (485)
T ss_dssp H-HHHTTCCEE-EESCSCCTTCCSSCSCTTSGGGGHHHHHHHH-------HSSCCEEEEECTTSSCEEEECTTSCBCCHH
T ss_pred H-HHHcCCeEE-EecCccCCCCCCCCcCCCCHHHHHHHHHHHH-------hhCCCEEEEECCCCCeEEEEeCCCceECHH
Confidence 9 799999987 4999999999999999985 58888999998 889999999999999999999 59999988
Q ss_pred chHHHHHHHHHhcCcccccCcceEEEeccchHHHHHHHHhcCCcee
Q 046205 319 DSVAIIAANAVESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFF 364 (365)
Q Consensus 319 ~~lall~~~ll~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~ 364 (365)
+.++|++.|++++. ++ ..||+|+.||..++++++++|++++
T Consensus 284 ~~~alla~~ll~~~----~~-~~vv~~v~ss~~l~~~~~~~g~~~~ 324 (485)
T 3uw2_A 284 RQLMLFAEEVLSRN----PG-AQIIYDVKCTRNLARWVREKGGEPL 324 (485)
T ss_dssp HHHHHHHHHHHHHS----TT-CEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhC----CC-CeEEEEeCCcHHHHHHHHHcCCEEE
Confidence 88889999998752 22 4699999999999999999998875
No 8
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=2.5e-61 Score=486.30 Aligned_cols=294 Identities=21% Similarity=0.290 Sum_probs=261.5
Q ss_pred CCCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCC
Q 046205 13 PIDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQN 92 (365)
Q Consensus 13 ~~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~ 92 (365)
.+++.+|||+||||+++.++|++++.++++|+|+++.++ .+++|+||||+|.+|++|+++++++|.++|++|+++
T Consensus 8 ~~~~~~Fgt~GiRG~~~~~~t~~~~~~i~~a~~~~l~~~--~~~~VvVG~D~R~ss~~l~~a~~~gl~a~G~~V~~~--- 82 (463)
T 1p5d_X 8 TLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR--GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDV--- 82 (463)
T ss_dssp -CCGGGBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEE---
T ss_pred cccccccCCCCcceeCCCCCCHHHHHHHHHHHHHHHHHc--CCCeEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEe---
Confidence 366889999999999999999999999999999999743 246899999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCCC
Q 046205 93 GLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLPD 172 (365)
Q Consensus 93 g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~ 172 (365)
|.+|||+++|+++++ ++++|||||||||| ++||||||++ +|.+++++.+++|++.+.+ . ++++
T Consensus 83 g~~pTP~l~~av~~~------~~~~GImITASHNP---~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~-~------~~~~ 145 (463)
T 1p5d_X 83 GMVPTPVLYYAANVL------EGKSGVMLTGSHNP---PDYNGFKIVV-AGETLANEQIQALRERIEK-N------DLAS 145 (463)
T ss_dssp EECCHHHHHHHHHHS------SCSEEEEECCTTSC---TTEEEEEEEE-TTEECCTHHHHHHHHHHHH-T------CCCC
T ss_pred CCCChHHHHHHHHhc------CCCeEEEEccCCCC---cccceEEEEC-CCccCCHHHHHHHHHHHhc-C------Cccc
Confidence 999999999999999 99999999999999 8999999999 9999999999999999864 1 2221
Q ss_pred cccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCCceee
Q 046205 173 VDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESS 252 (365)
Q Consensus 173 ~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~~v~~ 252 (365)
..|. +...+..+.|++++.+.++.+ +++|||+||+||+++.+++++ |++|||+++
T Consensus 146 ----~~g~-----------~~~~d~~~~Y~~~l~~~~~~~--------~~lkivvD~~nG~~~~~~~~l-l~~lG~~v~- 200 (463)
T 1p5d_X 146 ----GVGS-----------VEQVDILPRYFKQIRDDIAMA--------KPMKVVVDCGNGVAGVIAPQL-IEALGCSVI- 200 (463)
T ss_dssp ----BCCE-----------EEECCCHHHHHHHHHTTCCCS--------SCEEEEEECTTSGGGGTHHHH-HHHHHEEEE-
T ss_pred ----CCCc-----------eecCChHHHHHHHHHhhhccc--------CCCEEEEECCCCcHHHHHHHH-HHHcCCeEE-
Confidence 1332 234589999999999988631 489999999999999999999 799999987
Q ss_pred eeccccCCCCCCCCCCCCh-hcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHHHHHh
Q 046205 253 LLNCTPKEDFGGGHPDPNL-TYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAANAVE 330 (365)
Q Consensus 253 ~~~~~~d~~f~~~~p~p~~-~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~~ll~ 330 (365)
.+|++|||.||++.|||+. +++..+.+.++ +.++|+|+++||||||++++| +|+++++++.++|++.|+++
T Consensus 201 ~~~~~pDg~f~~~~p~p~~~~~l~~l~~~v~-------~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~L~a~~l~~ 273 (463)
T 1p5d_X 201 PLYCEVDGNFPNHHPDPGKPENLKDLIAKVK-------AENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVS 273 (463)
T ss_dssp EESCSCCTTCCSSCSCTTSGGGGHHHHHHHH-------HTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHH
T ss_pred EEeCccCCCCCCCCcCCCCHHHHHHHHHHHH-------HhCCCEEEEECCCCCeEEEEeCCCcEeCHHHHHHHHHHHHHH
Confidence 5999999999999999987 68889999998 889999999999999999999 58999988888888888887
Q ss_pred cCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 331 SIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 331 ~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
+. ++ ..||.|+.||.+++++|+++|+++++
T Consensus 274 ~~----~~-~~vv~~v~ss~~l~~~~~~~g~~~~~ 303 (463)
T 1p5d_X 274 RN----PG-ADIIFDVKCTRRLIALISGYGGRPVM 303 (463)
T ss_dssp HS----TT-CEEEEETTSCTHHHHHHHHTTCEEEE
T ss_pred hC----CC-CeEEEEecCcHHHHHHHHHcCCEEEE
Confidence 42 22 47999999999999999999999864
No 9
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=3.5e-61 Score=495.01 Aligned_cols=326 Identities=26% Similarity=0.297 Sum_probs=269.8
Q ss_pred chhhhhhCCCCC----------CcCCCCCcccccc-cccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHH
Q 046205 5 NVTRKETAPIDG----------QKPGTSGLRKKVK-VFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQ 73 (365)
Q Consensus 5 ~~~~~~~~~~~~----------~~Fgt~GiRG~~~-~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~ 73 (365)
|..||.++++.. +.|||+||||+++ ..+|++++.++++|+|+++.+++ ..++|+||||+|.+|+++++
T Consensus 42 ~~~~l~~~~~~~~~~~~~~~~r~~FGT~GiRG~~~~~~ln~~~v~~i~~A~a~~l~~~~-~~~~VvVG~D~R~~S~~~~~ 120 (570)
T 3na5_A 42 NVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNG-ITGPCYVGKDTHALSEPAFI 120 (570)
T ss_dssp CHHHHHHHHHHCCCCTTCGGGSCCCBTTBEEECGGGTSSSHHHHHHHHHHHHHHHHHTT-CCSCEEEEECSSTTHHHHHH
T ss_pred ChHHHHHHHhccCCCcCCccccceecCCCceeecCCCCCCHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCCCcccHHHHH
Confidence 455666666555 9999999999998 68999999999999999997543 23579999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCC-----cceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCCh
Q 046205 74 IITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSK-----ATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPE 148 (365)
Q Consensus 74 a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~-----~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~ 148 (365)
+++++|+++|++|+++.+.|++|||+++|+++++ + |++|||||||||| ++||||||++++|.|+++
T Consensus 121 ~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~~------~~~~~~~~~GImITASHNP---~~~NGiK~~~~~G~~~~~ 191 (570)
T 3na5_A 121 SVLEVLAANGVDVIVQENNGFTPTPAVSNAILVH------NKKGGPLADGIVITPSHNP---PEDGGIKYNPPNGGPADT 191 (570)
T ss_dssp HHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHHH------HHTCSSCCEEEEECCTTCC---TTCEEEEEECTTSSCCCH
T ss_pred HHHHHHHHCCCEEEEeCCCCccChHHHHHHHHHh------CCCccccceEEEEEeCCCC---hHHCcEEEecCCCCcCCH
Confidence 9999999999999975222999999999999999 7 8999999999999 899999999999999999
Q ss_pred hhHHHHHHHhhhhhhhhccCCCCCcccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEe
Q 046205 149 GITDKIYENTKTIKEYSIAEDLPDVDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYD 228 (365)
Q Consensus 149 ~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd 228 (365)
+++++|++.++++.+.. .+++++.++..... .+.+...++.+.|++++.+.++.+.|+. +++|||+|
T Consensus 192 ~i~~~Ie~~~~~~~~~~-~~~~~~~~~~~~~~--------~g~i~~~d~~~~Yi~~l~~~i~~~~i~~----~~lkIvvD 258 (570)
T 3na5_A 192 NVTKVVEDRANALLAGG-LQGVKRISLDAAMA--------SGHVKAVDLVQPFVEGLADIVDMAAIQK----AGLTLGVD 258 (570)
T ss_dssp HHHHHHHHHHHHHHHTT-TTTCCCCCHHHHHH--------TTCEEEECCHHHHHHHGGGTSCHHHHHH----HTCCEEEE
T ss_pred HHHHHHHHHHHHhhhcc-cccccccchhhhcc--------CCeeeccchHHHHHHHHHhhcChhhhcc----CCCEEEEE
Confidence 99999999876532111 11445544432111 1123456899999999999999888875 58999999
Q ss_pred cCCCCcHHHHHHHHHHHcCCceeeeeccccCCCCCCCCC--------CCChh-cHHHHHHHhcCCCCCCCCCCCeEEEee
Q 046205 229 ALHGVAGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHP--------DPNLT-YAKELVARMGLGKSNTQDEPPEFGAAA 299 (365)
Q Consensus 229 ~~~Ga~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p--------~p~~~-~l~~l~~~v~~~~~~a~~~~adlgi~~ 299 (365)
|+||+++.+++++ |++|||+++ ++++.+||+||++.| +|..+ ++..+.+. +.+||+|+++
T Consensus 259 ~~~Gag~~~~~~i-l~~lG~~v~-~v~~~~D~~F~~~~p~~~G~i~~~~~~~~al~~l~~~---------~~~aDlgia~ 327 (570)
T 3na5_A 259 PLGGSGIEYWKRI-AEHYKLNLT-LVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLAL---------RDKFDLAFAN 327 (570)
T ss_dssp CTTCTTHHHHHHH-HHHTTCCEE-ESCCCCCTTCTTSBCCTTSSCCCCTTCTTTTHHHHTT---------GGGCSEEEEE
T ss_pred CCCCcHHHHHHHH-HHHcCCeEE-EECCEECCCCCCCCCCcccccCCCCCChHHHHHHHHh---------ccCCCEEEEE
Confidence 9999999999999 799999987 599999999998765 44443 34555432 4689999999
Q ss_pred CCCCCeeeEeeCCEEeCCCchHHHHHHHHHhcCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 300 DGDADRNMILGKRFFVTPSDSVAIIAANAVESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 300 D~DgDR~~~vd~G~~l~~~~~lall~~~ll~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
||||||++++|+|++++++++++|+++|++++++.|.+ ...|+.|++||.+++++|+++|+++++
T Consensus 328 DgDaDR~~ivd~g~~l~gd~~lal~a~~ll~~~~~~~~-~~~v~~t~vSs~~l~~ia~~~G~~~~~ 392 (570)
T 3na5_A 328 DPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPLWGK-DVAVGKTLVSSAMIDRVVNDLGRKLVE 392 (570)
T ss_dssp CTTSCBEEEEETTEECCHHHHHHHHHHHHTTSCTTSCT-TCEEEEETTSCTHHHHHHHHHTCCEEE
T ss_pred CCCCCeEEEEECCEEECHhHHHHHHHHHHHHhCCCCCC-CceEEEeeCchHHHHHHHHHCCCceEE
Confidence 99999999999999999999999999999986543322 246899999999999999999999864
No 10
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=7.5e-61 Score=493.98 Aligned_cols=348 Identities=55% Similarity=0.898 Sum_probs=274.5
Q ss_pred hCCCCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCC-eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 11 TAPIDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGA-TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 11 ~~~~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~-~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
+...++.+|||+||||+++++++++++.++++|++.+|.++..+++ +|+||||+|.+|++|+++++++|+++|++|+++
T Consensus 13 ~~~~~~~~FGT~GiRG~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~VvIG~D~R~sS~~~a~~~a~~l~a~Gi~V~~~ 92 (572)
T 1kfi_A 13 TQPYAGQKPGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHV 92 (572)
T ss_dssp CCCCTTCCCBTTBEEEEHHHHTSTTHHHHHHHHHHHHSCGGGSSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcCccCCccCCccceEecceecHHHHHHHHHHHHHHHhhhccCCCCEEEEEecCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 4456789999999999999999999999999999999874332345 899999999999999999999999999999998
Q ss_pred CCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCC-CCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccC
Q 046205 90 GQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPN-EDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAE 168 (365)
Q Consensus 90 ~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~-~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~ 168 (365)
...|++|||+++|+++++|.. +.+|++||||||||||++|. +||||||++++|.+++++.+++|++.+++++.+...
T Consensus 93 ~~~G~~pTP~l~fav~~~n~~-~~~a~~GImITASHNP~~~~~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~- 170 (572)
T 1kfi_A 93 GQAGLMSTPASSHYIRKVNEE-VGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTV- 170 (572)
T ss_dssp EGGGCBCHHHHHHHHHHHHHH-SCCEEEEEEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTTCCEEEEC-
T ss_pred cCCCCCChHHHHHHHHHhccc-cCCcceEEEEeCCCCCCCcCcccCcEEEecCCCCcCCHHHHHHHHHHHHhhhccccc-
Confidence 545899999999999997311 11478999999999992221 499999999999999999999999998764322111
Q ss_pred CCC---CcccccccccccC---CCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHH
Q 046205 169 DLP---DVDISAVGVTSFG---GPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIF 242 (365)
Q Consensus 169 ~~~---~~~~~~~g~~~~~---~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~ 242 (365)
+.. +.+++..+..... ....++.....+..+.|++++.+.++.+.|++.+..+++|||+||+||+++.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~Yi~~l~~~~~~~~i~~~l~~~~lkIvvd~~nG~~~~~~~~i- 249 (572)
T 1kfi_A 171 DYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHI- 249 (572)
T ss_dssp CCCGGGTCCTTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHHTCTTCCEEEECTTSTHHHHHHHH-
T ss_pred ccccccccChhhccccccccccccccccceeecCcHHHHHHHHHHhcCHHHHhhhcccCCCEEEEeCCCcchHHHHHHH-
Confidence 000 1222222210000 000001233457899999999999998777643233689999999999999999999
Q ss_pred HH-HcCCc-eeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEeeCCEEeCCCch
Q 046205 243 VE-ELGAQ-ESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILGKRFFVTPSDS 320 (365)
Q Consensus 243 l~-~lg~~-v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd~G~~l~~~~~ 320 (365)
|+ +|||+ ++ ++|++|||+||++.|+|+.+++.+|.+.|......|++.+||+|+++||||||++++|+|+++++++.
T Consensus 250 l~~~lG~~~v~-~l~~~pD~~Fp~~~p~P~~~~~~~L~~~v~~~~~~a~~~~aDlgiA~DgDaDR~~vvd~G~~v~~~~~ 328 (572)
T 1kfi_A 250 FGTLLGCSKES-LLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDS 328 (572)
T ss_dssp HTTTTCCCGGG-EESCSCCTTGGGSCCCCSTTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEETTEEECHHHH
T ss_pred HHHhCCCCeEE-EEecccCCCCCCCCCCCCchhHHHHHHHHhhhhccccccCCCeEEeeCCCCceeEEeeCCeEecccHh
Confidence 78 99996 76 48999999999999999988899999998100000128899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 321 VAIIAANAVESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 321 lall~~~ll~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
+++++.+++..++ ++...||+|++||.+++++|+++|+++++
T Consensus 329 l~ll~~~~l~~~~---~g~~~Vv~~~~ss~~l~~ia~~~G~~~~~ 370 (572)
T 1kfi_A 329 LAVIAANANLIFK---NGLLGAARSMPTSGALDKVAAKNGIKLFE 370 (572)
T ss_dssp HHHHHHTHHHHST---TCCCCEEEETTSCTHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhc---CCCcEEEEEeCchHHHHHHHHHcCCeEEE
Confidence 9999998876421 23225999999999999999999999864
No 11
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-58 Score=472.83 Aligned_cols=317 Identities=26% Similarity=0.310 Sum_probs=242.3
Q ss_pred hCCCCCCcCCCCCcccc-cccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 11 TAPIDGQKPGTSGLRKK-VKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 11 ~~~~~~~~Fgt~GiRG~-~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
+..+++++|||+||||+ ++..+|++++.++++|+|+++.+++ .+++|+||||+|.+|++++++++++|+++|++|+++
T Consensus 18 ~~~~~~~~FGT~GiRG~~~~~~lt~~~v~~i~~a~~~~l~~~~-~~~~VvIG~D~R~~S~~~~~~~~~gl~a~Gi~V~~~ 96 (524)
T 2z0f_A 18 QNPLEGVRFGTSGHRGSSLKATFTEAHVLAIAQAIAELRPSFG-ATGPLFLAKDTHALSEPAWATALSVFAAHGIEVRVE 96 (524)
T ss_dssp TCGGGSCCEETTEEEECGGGTSSCHHHHHHHHHHHHHHTTTTT-CCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCccCcCcccCccccCCcccCCCCHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEe
Confidence 34566899999999996 5788999999999999999987433 234699999999999999999999999999999997
Q ss_pred CCCCcccchHHHHHHHHhhcCCCCC-----cceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhh
Q 046205 90 GQNGLLSTPAVSAVIRERVGSDGSK-----ATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEY 164 (365)
Q Consensus 90 ~~~g~~ptP~~~~av~~~~~~~~~~-----~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~ 164 (365)
.+.|.+|||+++|+++++ + |++|||||||||| ++||||||++++|.+++++++++||+.++.+.+.
T Consensus 97 ~~~G~~pTP~l~~av~~~------~~~~~~a~~GImITASHNP---~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~ 167 (524)
T 2z0f_A 97 ADGDYTPTPLVSLAILEH------NAHHEAKADGVLLTPSHNP---PEDGGFKYNPPTGGPANARITRAIEERANALLQE 167 (524)
T ss_dssp SSSSCCCHHHHHHHHHHH------HTTCSSCCEEEEECC--CC---TTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCccCcHHHHHHHHHh------CCCccccceEEEEcCCCCC---chhCCEEEECCCCCcCCHHHHHHHHHHHHhhccc
Confidence 434899999999999999 7 6999999999999 8999999999999999999999999876542110
Q ss_pred hccCCCCCcccccccccccCCCCCCccceeccchHHHHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHH
Q 046205 165 SIAEDLPDVDISAVGVTSFGGPEGQFDVEVFDSASDYVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVE 244 (365)
Q Consensus 165 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~ 244 (365)
. .+++++.++...+. .....+..+.|++++.+.++.+.|+. +++|||+||+||+++.+++++ |+
T Consensus 168 ~-~~~~~~~~~~~~~~----------~~~~~d~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~nG~~~~~~~~l-l~ 231 (524)
T 2z0f_A 168 G-LKGVKRLPLREALA----------RAKPFDYAGLYVEKVAEAVDLEAIRA----SGLRIGVDPLGGASLRVWERL-AE 231 (524)
T ss_dssp T-TTTCCCCCHHHHHH----------HCEEECHHHHHHHHGGGTSCHHHHHH----SCCCEEEECTTSTTHHHHHHH-HH
T ss_pred c-cccccccChhhhcc----------cccccchHHHHHHHHHHhcChhhhcc----CCCeEEEeCCCCchHHHHHHH-HH
Confidence 0 01344333332211 02346889999999999999877765 689999999999999999999 79
Q ss_pred HcCCceeeeeccccCCCCCCCC--------CCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEeeCCEEeC
Q 046205 245 ELGAQESSLLNCTPKEDFGGGH--------PDPNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILGKRFFVT 316 (365)
Q Consensus 245 ~lg~~v~~~~~~~~d~~f~~~~--------p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd~G~~l~ 316 (365)
+|||+++ ++++++||+||.+. |+|..+. .+...+ +.+.+||+|+++||||||++++|+.++++
T Consensus 232 ~lG~~v~-~v~~~~d~~f~~~~~~~~g~~~p~p~~~~--~l~~~~------~~~~~aDlgia~DgDaDR~~vvd~~~~l~ 302 (524)
T 2z0f_A 232 SHGLPLE-VVNPTLDPTFRFMPKDHDGKIRMDCSSPY--AMAGLL------ALKDRFDLAIGNDPDADRHGIVTPRGLMN 302 (524)
T ss_dssp HHTCCEE-EC---------------------------------CC------CCCCCSSEEEEECTTSCSEEEEETTEECC
T ss_pred HcCCcEE-EEcCccCCCCCCCCCCCccccCCCCCChh--HHHHHH------HhhcCCCEEEEeCCccccceEEecCceec
Confidence 9999987 59999999999754 4554432 222222 12778999999999999999999558999
Q ss_pred CCchHHHHHHHHHhcCcccccCcceEEEeccchHHHHHHHHhcCCceeC
Q 046205 317 PSDSVAIIAANAVESIPYFSAGLKGVARSMPTSAALDVVAKNLNLKFFE 365 (365)
Q Consensus 317 ~~~~lall~~~ll~~~~~~~~~~~~vv~~v~ss~~i~~ia~~~g~~v~e 365 (365)
+++.++|+++|++++. .+ ++ ..|+.+++||.+++++|+++|+++++
T Consensus 303 gd~i~alla~~l~~~~-~~-~~-~~vv~t~vss~~l~~ia~~~G~~~~~ 348 (524)
T 2z0f_A 303 PNHYLAAALHHLYTTR-SW-PG-AKVGKTAVTSALLDRVAQALGREVYE 348 (524)
T ss_dssp HHHHHHHHHHHHHTTC-CC-TT-CEEEEETTSCTHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHHHHhc-CC-CC-CeEEEecccHHHHHHHHHHhCceEEE
Confidence 8889989899988742 11 22 46899999999999999999999864
No 12
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=3.4e-55 Score=443.39 Aligned_cols=280 Identities=23% Similarity=0.227 Sum_probs=232.0
Q ss_pred CCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcc--cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCC
Q 046205 14 IDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEK--VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQ 91 (365)
Q Consensus 14 ~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~--~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~ 91 (365)
.+++.|||+||||++ .++|++++.++++|+|+++.+++ .++++|+||||+|.+|++|+++++++|+++|++|+++
T Consensus 7 ~~~~~FGT~GiRG~~-~~lt~~~v~~~~~a~a~~l~~~~~~~~~~~VvVG~D~R~ss~~~~~a~~~gl~a~Gi~V~~~-- 83 (481)
T 4hjh_A 7 SNSLKFGTSGLRGLA-VELNGLPAYAYTMAFVQMLAAKGQLQKGDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNC-- 83 (481)
T ss_dssp -CCCEECSSSEEEEH-HHHTTHHHHHHHHHHHHHHHHTTSCCTTCEEEEEECSSTTHHHHHHHHHHHHHHTTCEEEEE--
T ss_pred cccCcccCCCcceec-CCCCHHHHHHHHHHHHHHHHhhccccCCCeEEEeecCCcCHHHHHHHHHHHHHHCCCEEEEe--
Confidence 457999999999999 78999999999999999996432 1346899999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCC
Q 046205 92 NGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLP 171 (365)
Q Consensus 92 ~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~ 171 (365)
|.+|||+++|+++++ ++ +|||||||||| ++||||||++++|. +.++.+++|++.+.+ ++
T Consensus 84 -g~~pTP~l~fav~~~------~~-~GImITASHNP---~~~NGiK~~~~~G~-~~~~~e~~I~~~~~~---------~~ 142 (481)
T 4hjh_A 84 -GVLPTPALSYYAMGA------KA-PSIMVTGSHIP---DDRNGLKFYRRDGE-IDKDDEAAISAAYRK---------LP 142 (481)
T ss_dssp -EECCHHHHHHHHHHT------TC-CEEEECCTTSC---TTEEEEEEEETTEE-CCHHHHHHHHHHHHT---------CC
T ss_pred -CCcCcHHHHHHHHhc------CC-ceEEEecCCCC---CCCCCEEEeCCCCC-CCCHHHHHHHHHHhh---------hc
Confidence 999999999999999 87 79999999999 89999999999996 556677888887643 11
Q ss_pred Cc-c-cccccccccCCCCCCccceeccchHH-HHHHHHhhcCHHHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHcCC
Q 046205 172 DV-D-ISAVGVTSFGGPEGQFDVEVFDSASD-YVKLMKSIFDFELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGA 248 (365)
Q Consensus 172 ~~-~-~~~~g~~~~~~~~~~~~~~~~d~~~~-Y~~~l~~~~~~~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~lg~ 248 (365)
+. . ....|. ...+..+. |++++.+.++.+.+ +++||||||+||+++.+++++ |++|||
T Consensus 143 ~~~~~~~~~g~------------~~~d~~~~~Yi~~~~~~~~~~~~------~~lkivvd~~~Ga~~~~~~~~-l~~lG~ 203 (481)
T 4hjh_A 143 AILAARKHVGS------------TETDAALQAYADRYAGFLGKGSL------NGLRVGVYQHSSVARDLLMYL-LTTLGV 203 (481)
T ss_dssp C-CCCCCCCCS------------CCCCHHHHHHHHHHHHHHCTTTT------TTCEEEEEEETCTTHHHHHHH-HHHTTC
T ss_pred cccccccccCc------------ccccccHHHHHHHHHHhcCcccc------cCCEEEEECCCChHHHHHHHH-HHHcCC
Confidence 11 0 012221 13578888 99999998875332 579999999999999999999 799999
Q ss_pred ceeeeeccccCCCCCCCCCCCC-hhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEee-CCEEeCCCchHHHHHH
Q 046205 249 QESSLLNCTPKEDFGGGHPDPN-LTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMILG-KRFFVTPSDSVAIIAA 326 (365)
Q Consensus 249 ~v~~~~~~~~d~~f~~~~p~p~-~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~vd-~G~~l~~~~~lall~~ 326 (365)
+++ .+++ +++|++++|+|. .+++..+.+.|+ +.+||+|+++||||||++++| +|++++++ .+++|+.
T Consensus 204 ~v~-~l~~--~~~f~~~~~~p~~~e~l~~l~~~v~-------~~~aDlgia~DgDaDR~~vvd~~G~~i~gd-~l~~L~a 272 (481)
T 4hjh_A 204 EPV-ALGR--SDIFVPVDTEALRPEDIALLAQWGK-------SDRLDAIVSTDGDADRPLIADEHGQFVRGD-LAGAITA 272 (481)
T ss_dssp EEE-EEEE--CSSCCCCCTTSCCHHHHHHHHHHHT-------STTCSEEEEECTTSSSEEEECTTSCEECHH-HHHHHHH
T ss_pred eEE-EecC--CCCCCCCCCCCCCHHHHHHHHHHHH-------hcCCCEEEEECCCCCceEEEcCCCCEEChH-HHHHHHH
Confidence 987 4775 568998888875 468899999998 899999999999999999999 59999955 4554444
Q ss_pred HHHhcCcccccCcceEEEeccchHHHHHH
Q 046205 327 NAVESIPYFSAGLKGVARSMPTSAALDVV 355 (365)
Q Consensus 327 ~ll~~~~~~~~~~~~vv~~v~ss~~i~~i 355 (365)
+++. . ..|+.|+.||.+++++
T Consensus 273 ~~l~------~--~~vv~~v~ss~~l~~~ 293 (481)
T 4hjh_A 273 TWVG------A--DTLVTPVTSNTALESR 293 (481)
T ss_dssp HHTT------C--SEEEEETTSCTTHHHH
T ss_pred HHhh------c--CcEEEEEcChHHHHHh
Confidence 4332 1 3589999999999887
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=3e-38 Score=323.59 Aligned_cols=272 Identities=17% Similarity=0.108 Sum_probs=186.2
Q ss_pred CCCCcCCCCCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCC
Q 046205 14 IDGQKPGTSGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNG 93 (365)
Q Consensus 14 ~~~~~Fgt~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g 93 (365)
..+..|||+|+||.. ++||+++.++|+|+|..
T Consensus 19 ~~~~~fGt~G~RG~~--~~~~~~~~~~g~a~~~r---------------------------------------------- 50 (544)
T 2dka_A 19 GVTFTYGTAGFRMKA--DKLDYVTFTVGIIASLR---------------------------------------------- 50 (544)
T ss_dssp SCCCCCBTTBEEEEG--GGCHHHHHHHHHHHHHH----------------------------------------------
T ss_pred CCeeEeCCCCccccc--ccCHHHHHHHHHHHHHH----------------------------------------------
Confidence 467999999999988 69999999999988851
Q ss_pred cccchHHHHHHHHhhcCCCCC-cceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhH---------------------
Q 046205 94 LLSTPAVSAVIRERVGSDGSK-ATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGIT--------------------- 151 (365)
Q Consensus 94 ~~ptP~~~~av~~~~~~~~~~-~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~--------------------- 151 (365)
++++ + +++|||||||||| ++||||||++++|.+++++.+
T Consensus 51 ----------~~~~------~~~~~GImITASHNP---~~dNGiK~~~~~G~~l~~~~e~~~~~~an~~~~~~~~~~~~~ 111 (544)
T 2dka_A 51 ----------SKYL------QGKTVGVMITASHNP---PEDNGVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEK 111 (544)
T ss_dssp ----------HHHT------TTCEEEEEECCC-CC---TTEEEEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CT
T ss_pred ----------HHhc------CCcCceEEEeCCCCC---cccCceeeecCCCCcCCHHHHHHHHHHhcccccccccccchH
Confidence 5777 7 8999999999999 899999999999999999998
Q ss_pred HHHHHHhhhhhhhhccCCCC-------------Cccc-------------------ccccccccCCCCCCccc-------
Q 046205 152 DKIYENTKTIKEYSIAEDLP-------------DVDI-------------------SAVGVTSFGGPEGQFDV------- 192 (365)
Q Consensus 152 ~~Ie~~~~~~~~~~~~~~~~-------------~~~~-------------------~~~g~~~~~~~~~~~~~------- 192 (365)
++|++.+.++... ++++ |... .++|.+.. |+-.+.+
T Consensus 112 ~~I~~~i~~~~~~---~~~~~~~~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~~tt--P~l~~~v~~~~~~~ 186 (544)
T 2dka_A 112 NSLVEVIKNLVSD---LKIDLSIPANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTT--PELHYVTRTLNDPD 186 (544)
T ss_dssp TBHHHHHHHHHHH---TTCCTTSCEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEECCH--HHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhh---hcCCcccCceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEeccccc--chheeeeeeccccc
Confidence 6666633321100 1232 1111 11111100 0000000
Q ss_pred eeccchHHHHHHHHhhcCH-HHHHhhcCCCCceEEEecCCCCcHHHHHHHHHHHc--CCceeeeecccc-CCCCCCCCCC
Q 046205 193 EVFDSASDYVKLMKSIFDF-ELIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEEL--GAQESSLLNCTP-KEDFGGGHPD 268 (365)
Q Consensus 193 ~~~d~~~~Y~~~l~~~~~~-~~i~~~~~~~~~kvvvd~~~Ga~~~~~~~i~l~~l--g~~v~~~~~~~~-d~~f~~~~p~ 268 (365)
...+..+.|++++.+.++. ..++. ...+++||||||+||+++.+++++||++| ||+++ ++|++| ||.|+++.|+
T Consensus 187 ~g~~~~~~Y~~~l~~~~~~~~~~~~-~~~~~lkIvvD~~nGag~~~~~~i~l~~L~~G~~v~-~ln~~~dd~~~~n~~~~ 264 (544)
T 2dka_A 187 FGKPTEDGYYSKLAKSFQEIYTICE-SNNEKIDITIDAANGVGAPKIQELLEKYLHKEISFT-VVNGDYKQPNLLNFDCG 264 (544)
T ss_dssp GCCSSHHHHHHHHHHHHHHHHTC------CCEEEEEECTTSTHHHHHHHHHHHHSTTTEEEE-EESCCTTCGGGTTSSCS
T ss_pred cCCccHHHHHHHHHHHHHHHHhhhh-ccCCCCEEEEECCCcHHHHHHHHHHHHHhcCCceEE-EEcCcCCCCCcCCCCCC
Confidence 0022678999999987642 11100 01247999999999999999999955999 89987 599999 7999877776
Q ss_pred CChhcHHHHHHHhcCCCCCCCCCCCeEEEeeCCCCCeeeEe--e-CC--EEeCCCchHHHHHHHHHhcCcccc----cCc
Q 046205 269 PNLTYAKELVARMGLGKSNTQDEPPEFGAAADGDADRNMIL--G-KR--FFVTPSDSVAIIAANAVESIPYFS----AGL 339 (365)
Q Consensus 269 p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D~DgDR~~~v--d-~G--~~l~~~~~lall~~~ll~~~~~~~----~~~ 339 (365)
|. ....+.+.+. .-....+|+|+++||||||++++ | +| ++++++++++|++.|++++++.+. ...
T Consensus 265 ~~--~~~~~~~~~~----~~~~~~aDlGiA~DgDaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~~ 338 (544)
T 2dka_A 265 AD--YVKTNQKLPK----NVKPVNNKLYASFDGDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLN 338 (544)
T ss_dssp HH--HHHHHCSCCT----TCCCCBTCCEEEECTTSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCCC
T ss_pred cc--chhhhhhhhh----hhhcccccEEEEECCCCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCcccccC
Confidence 53 2222222221 01146789999999999999998 7 58 689988888899999987543221 112
Q ss_pred ceEEEeccchHHHHHH-HHhcCCceeC
Q 046205 340 KGVARSMPTSAALDVV-AKNLNLKFFE 365 (365)
Q Consensus 340 ~~vv~~v~ss~~i~~i-a~~~g~~v~e 365 (365)
..||.|+.||..+.+. ++.+|+++++
T Consensus 339 ~~vv~tv~sn~~~~~~i~~~~G~~v~~ 365 (544)
T 2dka_A 339 IGVVQTAYANGSSTKYVEDVLKIPVRC 365 (544)
T ss_dssp EEEEECTTSCHHHHHHHHHTSCCCEEE
T ss_pred CcEEEEeccccHHHHHHHHHcCCceEE
Confidence 4699997755555554 4459999864
No 14
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=97.22 E-value=0.00032 Score=71.40 Aligned_cols=50 Identities=22% Similarity=0.189 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHHc-CCEEEEeCCCCcccchHHHHHHHHh
Q 046205 55 GATLVVSGDGRYYSKDAIQIITKMAAAN-GVRRVWIGQNGLLSTPAVSAVIRER 107 (365)
Q Consensus 55 ~~~Vvvg~D~R~~s~~~~~a~a~gL~s~-G~~V~~~~~~g~~ptP~~~~av~~~ 107 (365)
...|+||||+|.+|+.+.+++.++|.+. |.+|.++ |.++||+++|+++..
T Consensus 132 ~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~---G~~ttP~l~~~v~~~ 182 (544)
T 2dka_A 132 PANVVIARDSRESSPALSMATIDGFQSVPNTKYQDF---GLFTTPELHYVTRTL 182 (544)
T ss_dssp CEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEE---EECCHHHHHHHHHHH
T ss_pred CceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEe---cccccchheeeeeec
Confidence 3579999999999999999999999999 9999999 999999999999887
No 15
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=89.33 E-value=1.6 Score=36.55 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=30.2
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeC
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIG 90 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~ 90 (365)
-+|+||.|. .+-.+|+.+.+-|.+.|++|.|++
T Consensus 13 ~~i~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G 45 (155)
T 1o1x_A 13 VKIAIASDH--AAFELKEKVKNYLLGKGIEVEDHG 45 (155)
T ss_dssp CEEEEEECS--TTHHHHHHHHHHHHHTTCEEEECC
T ss_pred eeEEEeeCc--hHHHHHHHHHHHHHHCCCEEEEeC
Confidence 479999995 689999999999999999999993
No 16
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=86.33 E-value=2 Score=35.70 Aligned_cols=31 Identities=13% Similarity=-0.020 Sum_probs=28.5
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
+|+||.|. .+..+|+.+.+-|.+.|++|.|+
T Consensus 3 kIaigsDh--aG~~lK~~i~~~L~~~G~eV~D~ 33 (149)
T 2vvr_A 3 KIAFGCDH--VGFILKHEIVAHLVERGVEVIDK 33 (149)
T ss_dssp EEEEEECT--TGGGGHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEeCc--hhHHHHHHHHHHHHHCCCEEEEe
Confidence 58999996 67889999999999999999999
No 17
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=85.73 E-value=2.1 Score=36.05 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=29.3
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeC
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIG 90 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~ 90 (365)
+|+||.|. .+..+|+.+.+-|.+.|++|.|++
T Consensus 5 kIaigsDh--aG~~lK~~i~~~L~~~G~eV~D~G 36 (162)
T 2vvp_A 5 RVYLGADH--AGYELKQRIIEHLKQTGHEPIDCG 36 (162)
T ss_dssp EEEEEECH--HHHHHHHHHHHHHHHTTCEEEECS
T ss_pred EEEEEeCc--hhHHHHHHHHHHHHHCCCEEEEeC
Confidence 69999995 679999999999999999999993
No 18
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=84.62 E-value=2.4 Score=35.85 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=29.3
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
+|+||.|. .+-.+|+.+.+-|.+.|++|.|+
T Consensus 23 kIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~ 53 (166)
T 3s5p_A 23 KVAFASDH--GGRDLRMFLQQRASAHGYEVMDL 53 (166)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECc--hHHHHHHHHHHHHHHCCCEEEEc
Confidence 69999996 68899999999999999999999
No 19
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=84.38 E-value=4.2 Score=33.72 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=29.2
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeC
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIG 90 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~ 90 (365)
+|+||.|. .+-.+|+.+.+-|.+.|++|.|++
T Consensus 2 kI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G 33 (149)
T 3he8_A 2 KIGIGSDH--GGYNLKREIADFLKKRGYEVIDFG 33 (149)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECc--hhHHHHHHHHHHHHHCCCEEEEcC
Confidence 58999996 678999999999999999999993
No 20
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=82.53 E-value=5.4 Score=33.79 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=29.7
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeC
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIG 90 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~ 90 (365)
-+|+||.|. .+-.+|+.+.+-|.+.|++|.|++
T Consensus 21 MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G 53 (169)
T 3ph3_A 21 MKIGIGSDH--GGYNLKREIADFLKKRGYEVIDFG 53 (169)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECC
T ss_pred CEEEEEeCc--hHHHHHHHHHHHHHHCCCEEEEcC
Confidence 369999997 577899999999999999999993
No 21
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=72.05 E-value=9.8 Score=32.45 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=29.1
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHH--cCCEEEEeC
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAA--NGVRRVWIG 90 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s--~G~~V~~~~ 90 (365)
+|+||.|. .+-.+|+.+.+-|.+ .|++|.|++
T Consensus 24 kIaIgsDh--aG~~lK~~i~~~L~~~~~G~eV~D~G 57 (179)
T 3k7p_A 24 RVAIGTDH--PAFAIHENLILYVKEAGDEFVPVYCG 57 (179)
T ss_dssp EEEEEECT--GGGGGHHHHHHHHHHTCTTEEEEECS
T ss_pred EEEEEECc--hHHHHHHHHHHHHHhcCCCCeEEEcC
Confidence 69999997 577899999999999 999999993
No 22
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=70.25 E-value=10 Score=33.30 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=28.1
Q ss_pred CeEEEEecCCCChH--HHHHHHHHHHHHcCCEEEEe
Q 046205 56 ATLVVSGDGRYYSK--DAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~--~~~~a~a~gL~s~G~~V~~~ 89 (365)
-+|+||.|....-+ .+++.+.+-|.+.|++|.|+
T Consensus 4 MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~eV~D~ 39 (216)
T 2ppw_A 4 MKIALINENSQASKNHIIYDSLKEATDKKGYQLFNY 39 (216)
T ss_dssp CEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEcCChHhhhhhhHHHHHHHHHHHCCCEEEEe
Confidence 36999999983222 36699999999999999999
No 23
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=70.09 E-value=29 Score=33.42 Aligned_cols=76 Identities=13% Similarity=0.183 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhhcccCCCeEEEEecCCCCh-HHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcce
Q 046205 39 NFVQSTFNALSAEKVRGATLVVSGDGRYYS-KDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATG 117 (365)
Q Consensus 39 ~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s-~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~g 117 (365)
++...|-++-..+ ...++|+|-|++...+ +.+|++++++|.+.|+++....- --+..+-++..+... .-..
T Consensus 250 ~ii~~Y~~w~~~~-~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~-~d~~~~~~s~i~~~i------~~~~ 321 (410)
T 4dik_A 250 RLLNHYVSVAKGD-PKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKF-SDEERPAISEILKDI------PDSE 321 (410)
T ss_dssp HHHHHHHHHHHTC-CCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEE-CSSCCCCHHHHHHHS------TTCS
T ss_pred HHHHHHHHhhccc-ccccceeeEEecccChHHHHHHHHHHHHHhcCCceEEEEe-ccCCCCCHHHHHHHH------HhCC
Confidence 3444444433211 2345799999998765 56899999999999999764310 223344456666665 3335
Q ss_pred eEEEe
Q 046205 118 AFILT 122 (365)
Q Consensus 118 GI~IT 122 (365)
||.+-
T Consensus 322 ~ivlG 326 (410)
T 4dik_A 322 ALIFG 326 (410)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66664
No 24
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=69.08 E-value=6.5 Score=32.55 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=30.0
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeC
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIG 90 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~ 90 (365)
.+|+||.|. .+-.+|+.+.+-|.+.|++|.|++
T Consensus 8 mkI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G 40 (148)
T 4em8_A 8 KRVFLSSDH--AGVELRLFLSAYLRDLGCEVFDCG 40 (148)
T ss_dssp SEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEEEECc--hhHHHHHHHHHHHHHCCCEEEEeC
Confidence 369999996 688999999999999999999993
No 25
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=67.22 E-value=24 Score=27.18 Aligned_cols=112 Identities=9% Similarity=-0.018 Sum_probs=72.4
Q ss_pred CCcccccccccchHHHHHHHHHHHHHhhhcccCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHH
Q 046205 22 SGLRKKVKVFTQPNYLHNFVQSTFNALSAEKVRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVS 101 (365)
Q Consensus 22 ~GiRG~~~~~~~~~~~~~l~~a~g~~l~~~~~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~ 101 (365)
.|++|.|. +|.+-+.|++.|+++.+.-......++++=.|..+ +..+++-|++..|-+|+...
T Consensus 12 ~G~pG~YP--LTaENL~R~GLALCtLl~iek~~eeP~l~i~elNF----ltmalsVGFM~gGG~V~vge----------- 74 (126)
T 2ehp_A 12 EGVPGNYP--LTAENLFRIGLALCTLWILDKEIEEPTLSIPETNF----VTLALSVGFMNAGGSVNVGK----------- 74 (126)
T ss_dssp EECTTSTT--SSHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCSH----HHHHHHHHHHHTTCEEEESS-----------
T ss_pred eccCCccc--ccHHHHHHHHHHHHHHHHHHhhhcCCeeeecccce----eeeeeeeeEeccCcceEeec-----------
Confidence 35555555 78888899999999888644323356666666654 56788899999999999761
Q ss_pred HHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCCCCCChhhHHHHHHHhhhhhhhhccCCCCCcccccccc
Q 046205 102 AVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNGGPAPEGITDKIYENTKTIKEYSIAEDLPDVDISAVGV 180 (365)
Q Consensus 102 ~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~g~ 180 (365)
+.++-+.+. ....-+-.+ .++++.+.+++|.++.. +| .+|+-..+++|.
T Consensus 75 ------------g~e~~lflk--------~GeidvL~F----~gL~e~D~kKLEsILFg--Ry----niPrKeGeeIG~ 123 (126)
T 2ehp_A 75 ------------GGDIKLFLQ--------KGEIYVLEF----QPLSETDIKKLESILFG--RA----PIPKKTGEDIGS 123 (126)
T ss_dssp ------------CCSEEEEEE--------CSSSEEEEE----ESCCHHHHHHHHHHHTS--SS----CCCCCCGGGSCC
T ss_pred ------------CCceeEEEe--------eCcEEEEEE----cCCChhhHHHHHHHhhc--cC----CCCccchhhccc
Confidence 123334441 122333334 36889999999999764 12 456655555654
No 26
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=66.79 E-value=12 Score=30.96 Aligned_cols=71 Identities=11% Similarity=0.019 Sum_probs=47.2
Q ss_pred ceEEEecCCC--CcHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCC--ChhcHHHHHHHhcCCCCCCCCCCCeEEEe
Q 046205 223 FTFCYDALHG--VAGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDP--NLTYAKELVARMGLGKSNTQDEPPEFGAA 298 (365)
Q Consensus 223 ~kvvvd~~~G--a~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p--~~~~l~~l~~~v~~~~~~a~~~~adlgi~ 298 (365)
+||++-+-|+ .....+.+. |++.|.+|.- ..+. ..++ .......+++.|. +..+|+||.
T Consensus 2 MkIaigsDhaG~~lK~~i~~~-L~~~G~eV~D---~G~~------~~~~~dYpd~a~~va~~V~-------~g~~d~GIl 64 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAH-LVERGVEVID---KGTW------SSERTDYPHYASQVALAVA-------GGEVDGGIL 64 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHH-HHHTTCEEEE---CCCC------SSSCCCHHHHHHHHHHHHH-------TTSSSEEEE
T ss_pred cEEEEEeCchhHHHHHHHHHH-HHHCCCEEEE---eCCC------CCCCCChHHHHHHHHHHHH-------cCCCceEEE
Confidence 5788888777 345667777 7999998752 2111 1111 1235567888887 778999999
Q ss_pred eCCCCCeeeEee
Q 046205 299 ADGDADRNMILG 310 (365)
Q Consensus 299 ~D~DgDR~~~vd 310 (365)
+.|.|-=+.+.-
T Consensus 65 iCGTGiG~siaA 76 (149)
T 2vvr_A 65 ICGTGVGISIAA 76 (149)
T ss_dssp EESSSHHHHHHH
T ss_pred EeCCcHHHHHHH
Confidence 999986554443
No 27
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=63.52 E-value=8.1 Score=33.11 Aligned_cols=31 Identities=10% Similarity=0.022 Sum_probs=28.7
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHcC--CEEEEe
Q 046205 57 TLVVSGDGRYYSKDAIQIITKMAAANG--VRRVWI 89 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~a~a~gL~s~G--~~V~~~ 89 (365)
+|+||.|. .+-.+|+.+.+-|.+.| ++|.|+
T Consensus 31 kIaIgsDH--aG~~LK~~i~~~L~~~G~g~eV~D~ 63 (184)
T 3sgw_A 31 RLAIACDD--AGVSYKEALKAHLSDNPLVSSITDV 63 (184)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred EEEEEECc--hhHHHHHHHHHHHHhCCCCcEEEEc
Confidence 59999996 67899999999999999 799999
No 28
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=63.47 E-value=12 Score=32.92 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=26.9
Q ss_pred eEEEEecCCCChHHHHH-----HHHHHHHHcCCEEEEe
Q 046205 57 TLVVSGDGRYYSKDAIQ-----IITKMAAANGVRRVWI 89 (365)
Q Consensus 57 ~Vvvg~D~R~~s~~~~~-----a~a~gL~s~G~~V~~~ 89 (365)
+|+||.|.- ..+|+ .+.+-|.+.|++|.|+
T Consensus 5 kIaigsDha---~~lK~~~i~~~l~~~L~~~G~eV~D~ 39 (214)
T 3ono_A 5 KIALMMENS---QAAKNAMVAGELNSVAGGLGHDVFNV 39 (214)
T ss_dssp EEEECCCGG---GGGGHHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCc---HHHHChhHHHHHHHHHHHCCCEEEEc
Confidence 699999986 66666 9999999999999999
No 29
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=62.23 E-value=15 Score=30.99 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=48.7
Q ss_pred CCceEEEecCCCCc--HHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCC--ChhcHHHHHHHhcCCCCCCCCCCCeEE
Q 046205 221 PKFTFCYDALHGVA--GAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDP--NLTYAKELVARMGLGKSNTQDEPPEFG 296 (365)
Q Consensus 221 ~~~kvvvd~~~Ga~--~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p--~~~~l~~l~~~v~~~~~~a~~~~adlg 296 (365)
.++||++-+-|+.. ...+.+. |++.|.+|+- ..+ ...++ .......+++.|. +.++|+|
T Consensus 19 ~~MkIaIgsDhaG~~lK~~i~~~-L~~~G~eV~D---~G~------~~~~~~dYpd~a~~va~~V~-------~g~~d~G 81 (169)
T 3ph3_A 19 SHMKIGIGSDHGGYNLKREIADF-LKKRGYEVID---FGT------HGNESVDYPDFGLKVAEAVK-------SGECDRG 81 (169)
T ss_dssp --CEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE---CCC------CSSSCCCHHHHHHHHHHHHH-------TTSSSEE
T ss_pred CCCEEEEEeCchHHHHHHHHHHH-HHHCCCEEEE---cCC------CCCCCCCHHHHHHHHHHHHH-------cCCCCEE
Confidence 46899999998642 3456666 7888988752 211 11122 1235567888888 7789999
Q ss_pred EeeCCCCCeeeEee
Q 046205 297 AAADGDADRNMILG 310 (365)
Q Consensus 297 i~~D~DgDR~~~vd 310 (365)
|.+.|.|-=+.+.-
T Consensus 82 IliCGTGiG~sIaA 95 (169)
T 3ph3_A 82 IVICGTGLGISIAA 95 (169)
T ss_dssp EEEESSSHHHHHHH
T ss_pred EEEcCCcHHHHHHh
Confidence 99999987666664
No 30
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=61.79 E-value=15 Score=30.92 Aligned_cols=75 Identities=11% Similarity=0.055 Sum_probs=48.8
Q ss_pred CCceEEEecCCCC--cHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEe
Q 046205 221 PKFTFCYDALHGV--AGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAA 298 (365)
Q Consensus 221 ~~~kvvvd~~~Ga--~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~ 298 (365)
..+||++-+-|+. -...+.+. |++.|.+|+- +-+.... +-........+++.|. +.++|+||.
T Consensus 20 ~~MkIaIgsDhaG~~lK~~i~~~-L~~~G~eV~D-~G~~~~~------~~dYPd~a~~va~~V~-------~g~~d~GIl 84 (166)
T 3s5p_A 20 GSMKVAFASDHGGRDLRMFLQQR-ASAHGYEVMD-LGTESDA------SVDYPDFAKIGCEAVT-------SGRADCCIL 84 (166)
T ss_dssp TTCEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE-EEC--------------CHHHHHHHHHHH-------TTSCSEEEE
T ss_pred CceEEEEEECchHHHHHHHHHHH-HHHCCCEEEE-cCCCCCC------CCCHHHHHHHHHHHHH-------cCCCcEEEE
Confidence 3589999998864 23346666 7889998753 2211100 0111245567888887 788999999
Q ss_pred eCCCCCeeeEee
Q 046205 299 ADGDADRNMILG 310 (365)
Q Consensus 299 ~D~DgDR~~~vd 310 (365)
+.|.|-=+.+.-
T Consensus 85 iCGTGiG~sIaA 96 (166)
T 3s5p_A 85 VCGTGIGISIAA 96 (166)
T ss_dssp EESSSHHHHHHH
T ss_pred EcCCcHHHHHHh
Confidence 999998776665
No 31
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=59.81 E-value=18 Score=29.85 Aligned_cols=71 Identities=8% Similarity=0.023 Sum_probs=46.3
Q ss_pred ceEEEecCCCC--cHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCC--ChhcHHHHHHHhcCCCCCCCCCCCeEEEe
Q 046205 223 FTFCYDALHGV--AGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDP--NLTYAKELVARMGLGKSNTQDEPPEFGAA 298 (365)
Q Consensus 223 ~kvvvd~~~Ga--~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p--~~~~l~~l~~~v~~~~~~a~~~~adlgi~ 298 (365)
+||++-+-|+. -...+.+. |++.|.+|.- ..+ ...++ .......+++.|. +.++|+||.
T Consensus 1 MkI~igsDhaG~~lK~~i~~~-L~~~G~eV~D---~G~------~~~~~~dYpd~a~~va~~V~-------~g~~d~GIl 63 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADF-LKKRGYEVID---FGT------HGNESVDYPDFGLKVAEAVK-------SGECDRGIV 63 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE---CCC------CSSSCCCHHHHHHHHHHHHH-------TTSSSEEEE
T ss_pred CEEEEEECchhHHHHHHHHHH-HHHCCCEEEE---cCC------CCCCCCCHHHHHHHHHHHHH-------cCCCCEEEE
Confidence 46777777754 23346666 7888988742 211 11122 1235567888888 788999999
Q ss_pred eCCCCCeeeEee
Q 046205 299 ADGDADRNMILG 310 (365)
Q Consensus 299 ~D~DgDR~~~vd 310 (365)
+.|.|-=+.+.-
T Consensus 64 iCGTGiG~siaA 75 (149)
T 3he8_A 64 ICGTGLGISIAA 75 (149)
T ss_dssp EESSSHHHHHHH
T ss_pred EcCCcHHHHHHh
Confidence 999987666654
No 32
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=59.62 E-value=17 Score=31.89 Aligned_cols=77 Identities=10% Similarity=0.015 Sum_probs=48.5
Q ss_pred CceEEEecCCCCcH------HHHHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeE
Q 046205 222 KFTFCYDALHGVAG------AYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEF 295 (365)
Q Consensus 222 ~~kvvvd~~~Ga~~------~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adl 295 (365)
++||++-+-|.... ..+.+. |++.|.+|.- +-+..... ..+.........+++.|. +..+|+
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~-L~~~G~eV~D-~G~~s~~d---~~s~DYPd~a~~vA~~V~-------~g~~d~ 70 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEA-TDKKGYQLFN-YGMRGEEG---ESQLTYVQNGLMAAILLN-------TKAVDF 70 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHH-HHHHTCEEEE-CSCCSCTT---CCCCCHHHHHHHHHHHHH-------TTSCSE
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHH-HHHCCCEEEE-eCCCCCCC---CCCCChHHHHHHHHHHHH-------cCCCCe
Confidence 58999999888442 466777 7899998752 21110000 000011235567888887 778999
Q ss_pred EEeeCCCCCeeeEee
Q 046205 296 GAAADGDADRNMILG 310 (365)
Q Consensus 296 gi~~D~DgDR~~~vd 310 (365)
||.+.|.|-=+.+.-
T Consensus 71 GIliCGTGiG~sIAA 85 (216)
T 2ppw_A 71 VVTGCGTGVGAMLAL 85 (216)
T ss_dssp EEEEESSSHHHHHHH
T ss_pred EEEEcCCcHHHHHHh
Confidence 999999986555443
No 33
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=58.37 E-value=54 Score=26.70 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=29.2
Q ss_pred CCeEEEEecCC-CChHHHHHHHHHHHHHcCCEEEEe
Q 046205 55 GATLVVSGDGR-YYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 55 ~~~Vvvg~D~R-~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
.++|+|-|.+. .+.+.++++++.+|.+.|++|..+
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~ 39 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVV 39 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEE
Confidence 35788888876 478899999999999999987665
No 34
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=57.81 E-value=29 Score=27.76 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=33.0
Q ss_pred CeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHh
Q 046205 56 ATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRER 107 (365)
Q Consensus 56 ~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~ 107 (365)
.+|+++. |.+.-+. +.++..|...|++|++++ ..+|...+.-++++.
T Consensus 4 ~~vvla~~~~d~HdiG~---~~v~~~l~~~G~~Vi~lG--~~~p~e~~v~~a~~~ 53 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGN---KILDHAFTNAGFNVVNIG--VLSPQELFIKAAIET 53 (137)
T ss_dssp CEEEEEEETTCCCCHHH---HHHHHHHHHTTCEEEEEE--EEECHHHHHHHHHHH
T ss_pred CEEEEEeCCCchhHHHH---HHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHhc
Confidence 4566654 6555554 456788999999999993 346666777777776
No 35
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=56.64 E-value=39 Score=30.15 Aligned_cols=59 Identities=25% Similarity=0.219 Sum_probs=41.6
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCC-cccchHHHHHHHHhhcCCCCCcceeEEEeCCCC
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNG-LLSTPAVSAVIRERVGSDGSKATGAFILTASHN 126 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g-~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShn 126 (365)
.++|+++. |.+.-+ +..++..|..+|++|+++ | .+|...+.-++++. +.+ .|.++++..
T Consensus 123 ~~~vlla~~~gd~HdiG---~~iva~~L~~~G~~Vi~L---G~~vp~e~l~~~~~~~------~~d-~V~lS~l~~ 185 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIG---KNIVTALLRANGYNVVDL---GRDVPAEEVLAAVQKE------KPI-MLTGTALMT 185 (258)
T ss_dssp SCEEEEEECTTCCCCHH---HHHHHHHHHHTTCEEEEE---EEECCSHHHHHHHHHH------CCS-EEEEECCCT
T ss_pred CCeEEEEeCCCCccHHH---HHHHHHHHHHCCCEEEEC---CCCCCHHHHHHHHHHc------CCC-EEEEEeecc
Confidence 45688876 555444 556688899999999999 5 46777777778877 554 466666543
No 36
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=56.15 E-value=39 Score=28.92 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=41.2
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCC
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTAS 124 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaS 124 (365)
.++|+++. |.+.-+ +..++..|..+|++|++++ --+|...+.-++++. +.+ .|.++++
T Consensus 88 ~~~vll~~~~gd~H~iG---~~~va~~l~~~G~~v~~LG--~~vp~~~l~~~~~~~------~~d-~v~lS~~ 148 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIG---KNLVAMMLESGGFTVYNLG--VDIEPGKFVEAVKKY------QPD-IVGMSAL 148 (210)
T ss_dssp CCEEEEEEBTTCCCCHH---HHHHHHHHHHTTCEEEECC--SSBCHHHHHHHHHHH------CCS-EEEEECC
T ss_pred CCEEEEEeCCCcccHHH---HHHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHHc------CCC-EEEEecc
Confidence 35688876 555444 5567888999999999993 356777777788877 554 4666664
No 37
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=55.36 E-value=83 Score=27.16 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=35.0
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCCc-ccchHHHHHHHHh
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNGL-LSTPAVSAVIRER 107 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~-~ptP~~~~av~~~ 107 (365)
..+|+++. |.+.-+..+ ++..|..+|++|+++ |. +|...+.-++++.
T Consensus 92 ~~~vll~~v~gd~HdiG~~i---v~~~l~~~G~~Vi~L---G~~vp~e~iv~~~~~~ 142 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRL---VTTMLGANGFQIVDL---GVDVLNENVVEEAAKH 142 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHH---HHHHHHHTSCEEEEC---CSSCCHHHHHHHHHHT
T ss_pred CCeEEEEeCCCChhHHHHHH---HHHHHHHCCCeEEEc---CCCCCHHHHHHHHHHc
Confidence 35788886 777666554 577899999999999 64 6666666677776
No 38
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.32 E-value=36 Score=28.08 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=34.1
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCC-cccchHHHHHHHHh
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNG-LLSTPAVSAVIRER 107 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g-~~ptP~~~~av~~~ 107 (365)
..+|+++. |.+.-+..+ ++..|...|++|+++ | .+|...+.-++++.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~---va~~l~~~G~eVi~l---G~~~p~e~lv~aa~~~ 68 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKV---VARALRDAGFEVVYT---GLRQTPEQVAMAAVQE 68 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHH---HHHHHHHTTCEEECC---CSBCCHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCccHHHHHH---HHHHHHHCCCEEEEC---CCCCCHHHHHHHHHhc
Confidence 45677765 777766544 567789999999999 5 46666677777776
No 39
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=50.90 E-value=32 Score=28.53 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=48.6
Q ss_pred CCceEEEecCCCC--cHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEe
Q 046205 221 PKFTFCYDALHGV--AGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAA 298 (365)
Q Consensus 221 ~~~kvvvd~~~Ga--~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~ 298 (365)
.-.||++-+-|+. -...+.+. |++.|.+|.- ..+... .+.........+++.|. +.++|+||.
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~-L~~~G~eV~D---~G~~~~----~~~dYpd~a~~va~~V~-------~g~~d~GIl 75 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNY-LLGKGIEVED---HGTYSE----ESVDYPDYAKKVVQSIL-------SNEADFGIL 75 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHH-HHHTTCEEEE---CCCCSS----SCCCHHHHHHHHHHHHH-------TTSCSEEEE
T ss_pred cceeEEEeeCchHHHHHHHHHHH-HHHCCCEEEE---eCCCCC----CCCChHHHHHHHHHHHH-------cCCCceEEE
Confidence 3578999887764 23346666 7888998752 211100 01111235567888887 778999999
Q ss_pred eCCCCCeeeEee
Q 046205 299 ADGDADRNMILG 310 (365)
Q Consensus 299 ~D~DgDR~~~vd 310 (365)
+.|.|-=+.+.-
T Consensus 76 iCGTGiG~siaA 87 (155)
T 1o1x_A 76 LCGTGLGMSIAA 87 (155)
T ss_dssp EESSSHHHHHHH
T ss_pred EcCCcHHHHHHh
Confidence 999987666664
No 40
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=48.38 E-value=37 Score=28.89 Aligned_cols=73 Identities=16% Similarity=0.129 Sum_probs=49.2
Q ss_pred CCceEEEecCCCC--cHHHHHHHHHHH--cCCceeeeeccccCCCCCCCCCCC--ChhcHHHHHHHhcCCCCCCCCCCCe
Q 046205 221 PKFTFCYDALHGV--AGAYAKRIFVEE--LGAQESSLLNCTPKEDFGGGHPDP--NLTYAKELVARMGLGKSNTQDEPPE 294 (365)
Q Consensus 221 ~~~kvvvd~~~Ga--~~~~~~~i~l~~--lg~~v~~~~~~~~d~~f~~~~p~p--~~~~l~~l~~~v~~~~~~a~~~~ad 294 (365)
..+||++-+-|+. -...+.+. |++ .|.+|+- ..+ ...++ .......+++.|. +.++|
T Consensus 21 M~MkIaIgsDhaG~~lK~~i~~~-L~~~~~G~eV~D---~G~------~s~~s~DYPd~a~~vA~~V~-------~g~~d 83 (179)
T 3k7p_A 21 MTRRVAIGTDHPAFAIHENLILY-VKEAGDEFVPVY---CGP------KTAESVDYPDFASRVAEMVA-------RKEVE 83 (179)
T ss_dssp CCEEEEEEECTGGGGGHHHHHHH-HHHTCTTEEEEE---CSC------SSSSCCCHHHHHHHHHHHHH-------TTSSS
T ss_pred CceEEEEEECchHHHHHHHHHHH-HHhcCCCCeEEE---cCC------CCCCCCCHHHHHHHHHHHHH-------cCCCC
Confidence 3578999998864 34456666 788 8887642 211 11122 2235567888888 78899
Q ss_pred EEEeeCCCCCeeeEee
Q 046205 295 FGAAADGDADRNMILG 310 (365)
Q Consensus 295 lgi~~D~DgDR~~~vd 310 (365)
+||.+.|.|-=+.+..
T Consensus 84 ~GIliCGTGiG~sIaA 99 (179)
T 3k7p_A 84 FGVLAAGSGIGMSIAA 99 (179)
T ss_dssp EEEEEESSSHHHHHHH
T ss_pred EEEEEccCcHHHhhHh
Confidence 9999999987666554
No 41
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=46.03 E-value=25 Score=33.92 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=44.9
Q ss_pred CCCeEEEEecCCCC---hHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCC
Q 046205 54 RGATLVVSGDGRYY---SKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNP 127 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~---s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp 127 (365)
++.+|++..|...+ +-..+++++.++.-.|++|+..+..|+.|.|.+--..++. -...|.-|+-.|+|
T Consensus 190 ~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~------a~~~G~~i~~~~d~ 260 (399)
T 3q98_A 190 KGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNN------AKASGGSFRQVTSM 260 (399)
T ss_dssp TTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHH------HHHHTCEEEEESCH
T ss_pred CCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHH------HHHcCCEEEEEcCH
Confidence 56678877664332 2367889999998999999999888888888654333332 12234445556776
No 42
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=44.37 E-value=78 Score=26.63 Aligned_cols=77 Identities=13% Similarity=0.114 Sum_probs=56.0
Q ss_pred EEEEec------CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhc-CCCCCcceeEEEeCCCCCCCC
Q 046205 58 LVVSGD------GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVG-SDGSKATGAFILTASHNPGGP 130 (365)
Q Consensus 58 Vvvg~D------~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~-~~~~~~~gGI~ITaShnp~~~ 130 (365)
++|+.. .|..+..=++.++..|...|++|... .-.+.-.+.-+++++-. .++++.+..+++-+||--
T Consensus 47 LIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~---~dlt~~em~~~l~~f~~~~d~~~~d~~v~~~lsHG~--- 120 (178)
T 2h54_A 47 LIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVK---KNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGI--- 120 (178)
T ss_dssp EEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEESCBC---
T ss_pred EEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEe---cCCCHHHHHHHHHHHHhhhhcCCCCEEEEEEecCCC---
Confidence 677887 57788889999999999999999988 45667777777777521 124456677888889943
Q ss_pred CCCCeEEEEcCCCC
Q 046205 131 NEDFGIKYNMDNGG 144 (365)
Q Consensus 131 ~~~nGiK~~~~~G~ 144 (365)
+ ++ ++..++.
T Consensus 121 -~-g~--i~g~D~~ 130 (178)
T 2h54_A 121 -R-EG--ICGKKHS 130 (178)
T ss_dssp -S-SC--EECTTCC
T ss_pred -C-Ce--EEeecCC
Confidence 1 22 5666664
No 43
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=43.06 E-value=96 Score=27.45 Aligned_cols=70 Identities=16% Similarity=0.043 Sum_probs=53.1
Q ss_pred CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCC
Q 046205 64 GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNG 143 (365)
Q Consensus 64 ~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G 143 (365)
.|..+..=++.++..|.+.|++|... .-...-.+.-+++++-..+++..+..+++=+||-- .| .++..+|
T Consensus 35 ~r~g~~~D~~~l~~~f~~LgF~V~~~---~dlt~~em~~~l~~~~~~~~~~~d~~v~~~lsHG~------~g-~i~~~D~ 104 (250)
T 2j32_A 35 SRSGTDVDAANLRETFRNLKYEVRNK---NDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE------EG-IIFGTNG 104 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEE------TT-EEEETTE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEE---eCCCHHHHHHHHHHHHHhhccCCCEEEEEECCCCC------CC-eEEecCC
Confidence 67778888999999999999999988 45667777777777633335677888999999943 34 3566666
No 44
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=39.74 E-value=33 Score=32.48 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=39.7
Q ss_pred cCCCe--EEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCC-CcccchHHH
Q 046205 53 VRGAT--LVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQN-GLLSTPAVS 101 (365)
Q Consensus 53 ~~~~~--Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~-g~~ptP~~~ 101 (365)
.++.+ |++.-|-++++...+++++.++...|++|+..+.. ++.|.|.+.
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~ 239 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYM 239 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHH
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHH
Confidence 35678 66778888877788999999999999999999777 777776554
No 45
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=39.00 E-value=35 Score=33.09 Aligned_cols=48 Identities=19% Similarity=0.155 Sum_probs=37.3
Q ss_pred CCCeEEEEecCCCC-hH--HHHHHHHHHHHHcCCEEEEeCCCCcccchHHH
Q 046205 54 RGATLVVSGDGRYY-SK--DAIQIITKMAAANGVRRVWIGQNGLLSTPAVS 101 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~-s~--~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~ 101 (365)
++.+|++-.|...+ ++ ..+++++.++...|++|+..+..++.|.|.+-
T Consensus 187 ~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~ 237 (418)
T 2yfk_A 187 KGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVE 237 (418)
T ss_dssp TTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHH
T ss_pred CCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHH
Confidence 46678776674433 44 78999999999999999999888888888653
No 46
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=38.41 E-value=31 Score=29.48 Aligned_cols=76 Identities=8% Similarity=-0.046 Sum_probs=47.5
Q ss_pred CCceEEEecCCCC--cHHHHHHHHHHHcC--CceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEE
Q 046205 221 PKFTFCYDALHGV--AGAYAKRIFVEELG--AQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFG 296 (365)
Q Consensus 221 ~~~kvvvd~~~Ga--~~~~~~~i~l~~lg--~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlg 296 (365)
.++||++-+-|+- -...+.+. |++.| .+|+ +..++.. ..+.........+++.|. +.++|+|
T Consensus 28 ~~MkIaIgsDHaG~~LK~~i~~~-L~~~G~g~eV~---D~G~~s~---~e~~DYPd~a~~vA~~V~-------~ge~d~G 93 (184)
T 3sgw_A 28 PPLRLAIACDDAGVSYKEALKAH-LSDNPLVSSIT---DVGVTST---TDKTAYPHVAIQAAQLIK-------DGKVDRA 93 (184)
T ss_dssp CCEEEEEEECGGGHHHHHHHHHH-HTTCTTEEEEE---ECSCCST---TCCCCHHHHHHHHHHHHH-------TTSCSEE
T ss_pred CCcEEEEEECchhHHHHHHHHHH-HHhCCCCcEEE---EcCCCCC---CCCCCHHHHHHHHHHHHH-------cCCCcEE
Confidence 4689999998864 23345555 67777 4653 2221100 001112235567888888 7889999
Q ss_pred EeeCCCCCeeeEee
Q 046205 297 AAADGDADRNMILG 310 (365)
Q Consensus 297 i~~D~DgDR~~~vd 310 (365)
|.+.|.|-=+.+.-
T Consensus 94 IliCGTGiG~sIaA 107 (184)
T 3sgw_A 94 LMICGTGLGVAISA 107 (184)
T ss_dssp EEEESSSHHHHHHH
T ss_pred EEEcCCcHHHhhhh
Confidence 99999987666554
No 47
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=37.97 E-value=69 Score=28.32 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=27.1
Q ss_pred CCeEEEEecCCCChH--HHHHHHHHHHHHcCCEEEEe
Q 046205 55 GATLVVSGDGRYYSK--DAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 55 ~~~Vvvg~D~R~~s~--~~~~a~a~gL~s~G~~V~~~ 89 (365)
+.+|.|--.+...+. .+++.+.+-|.+.|++|.|+
T Consensus 19 ~mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~ 55 (231)
T 3c5y_A 19 GMKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNY 55 (231)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEEC
T ss_pred cceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEe
Confidence 445555444444444 99999999999999999999
No 48
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=36.98 E-value=1.1e+02 Score=24.65 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=25.2
Q ss_pred EEEEecCC-CChHHHHHHHHHHHHHcCCEEEEe
Q 046205 58 LVVSGDGR-YYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 58 Vvvg~D~R-~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
|+|-|.+. .+.+.++++++++|.+.|++|..+
T Consensus 3 v~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 35 (161)
T 3hly_A 3 VLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMV 35 (161)
T ss_dssp EEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCChHHHHHHHHHHHHHHhCCCeEEEE
Confidence 55556554 578999999999999999876555
No 49
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=36.12 E-value=1.4e+02 Score=26.80 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=51.6
Q ss_pred EEEEec--------CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCC
Q 046205 58 LVVSGD--------GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHN 126 (365)
Q Consensus 58 Vvvg~D--------~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShn 126 (365)
++|+.. .|..+..=++.++..|...|++|... .-...-.+.-+++++-..++++.+..+++=+||-
T Consensus 36 LIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~V~~~---~dlt~~em~~~l~~~~~~dh~~~d~~v~~~lsHG 109 (272)
T 1m72_A 36 IIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVF---PNLKSEEINKFIQQTAEMDHSDADCLLVAVLTHG 109 (272)
T ss_dssp EEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCE
T ss_pred EEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEe---cCcCHHHHHHHHHHHHHhhcCCCCEEEEEEcCCC
Confidence 666654 47778888999999999999999988 4566677777777763333577888999999993
No 50
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=34.46 E-value=32 Score=28.81 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=45.6
Q ss_pred CceEEEecCCCC--cHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCC---ChhcHHHHHHHhcCCCCCCCCCCCeEE
Q 046205 222 KFTFCYDALHGV--AGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDP---NLTYAKELVARMGLGKSNTQDEPPEFG 296 (365)
Q Consensus 222 ~~kvvvd~~~Ga--~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p---~~~~l~~l~~~v~~~~~~a~~~~adlg 296 (365)
.+||++-+-|+. ....+.+. |++.|.+|.- ..+ ...+| .......+++.|. +..+|+|
T Consensus 3 ~MkIaigsDhaG~~lK~~i~~~-L~~~G~eV~D---~G~------~~~~~~~dYpd~a~~va~~V~-------~g~~d~G 65 (162)
T 2vvp_A 3 GMRVYLGADHAGYELKQRIIEH-LKQTGHEPID---CGA------LRYDADDDYPAFCIAAATRTV-------ADPGSLG 65 (162)
T ss_dssp CCEEEEEECHHHHHHHHHHHHH-HHHTTCEEEE---CSC------CSCCTTCCHHHHHHHHHHHHH-------HSTTCEE
T ss_pred CCEEEEEeCchhHHHHHHHHHH-HHHCCCEEEE---eCC------CCCCCCCChHHHHHHHHHHHH-------cCCCceE
Confidence 368888887762 23456667 7889998752 211 11121 1234567788887 7789999
Q ss_pred EeeCCCCCeeeEe
Q 046205 297 AAADGDADRNMIL 309 (365)
Q Consensus 297 i~~D~DgDR~~~v 309 (365)
|.+.|.|-=+.+.
T Consensus 66 IliCGTGiG~sia 78 (162)
T 2vvp_A 66 IVLGGSGNGEQIA 78 (162)
T ss_dssp EEEESSSHHHHHH
T ss_pred EEEeCCcHHHHHH
Confidence 9999997655444
No 51
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=32.52 E-value=71 Score=27.91 Aligned_cols=76 Identities=9% Similarity=0.076 Sum_probs=47.2
Q ss_pred CceEEEecCCCCc-HH-----HHHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeE
Q 046205 222 KFTFCYDALHGVA-GA-----YAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEF 295 (365)
Q Consensus 222 ~~kvvvd~~~Ga~-~~-----~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adl 295 (365)
.+||++-+-|+.. .. .+.+. |++.|.+|+- +-..++. ..+.........+++.|. +..+|+
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~-L~~~G~eV~D-~G~~~~~----~~~~dYpd~a~~vA~~V~-------~g~~d~ 69 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSV-AGGLGHDVFN-VGMTDEN----DHHLTYIHLGIMASILLN-------SKAVDF 69 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHH-HHHTTCEEEE-CSCSSTT----SSCCCHHHHHHHHHHHHH-------TTSCSE
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHH-HHHCCCEEEE-cCCCCCC----CCCCCHHHHHHHHHHHHH-------cCCCCE
Confidence 5789998888842 22 35556 6888988742 2110110 001111235567888887 778999
Q ss_pred EEeeCCCCCeeeEee
Q 046205 296 GAAADGDADRNMILG 310 (365)
Q Consensus 296 gi~~D~DgDR~~~vd 310 (365)
||.+.|.|-=+.+.-
T Consensus 70 GIliCGTGiG~siaA 84 (214)
T 3ono_A 70 VVTGCGTGQGALMSC 84 (214)
T ss_dssp EEEEESSSHHHHHHH
T ss_pred EEEEcCCcHHHHHHH
Confidence 999999987665554
No 52
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=31.56 E-value=1e+02 Score=31.02 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=42.3
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCC
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASH 125 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaSh 125 (365)
..+|+++. |.+.-+ ++.++..|..+|++|++++ -.+|...+.-++++. +.+ .|.++++.
T Consensus 98 ~~kVLlatv~GD~HdiG---~~iva~~L~~~G~eVi~LG--~~vP~e~iv~aa~~~------~~d-iVgLS~l~ 159 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIG---KNIVGVVLQCNNYEIVDLG--VMVPAEKILRTAKEV------NAD-LIGLSGLI 159 (579)
T ss_dssp SCEEEEEEBTTCCCCHH---HHHHHHHHHTTTCEEEECC--SSBCHHHHHHHHHHH------TCS-EEEEECCS
T ss_pred CCeEEEEECCCCCchHH---HHHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHHc------CCC-EEEEEecC
Confidence 45788876 666655 4556888999999999993 246777777788887 654 46666643
No 53
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=31.21 E-value=60 Score=30.46 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=43.5
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCC
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNP 127 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp 127 (365)
++.+|++--|. + ..+++++.++...|++|+..+..++.|.+.+.-.+++. -...|.-|+-.|+|
T Consensus 174 ~glkva~vGD~---~-rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~------a~~~g~~v~~~~d~ 237 (339)
T 4a8t_A 174 EDCKVVFVGDA---T-QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKN------CEVSGGSFLVTDDA 237 (339)
T ss_dssp GGCEEEEESSC---C-HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHH------HHHHCCEEEEECCG
T ss_pred CCCEEEEECCC---c-hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHH------HHHcCCEEEEECCh
Confidence 45678887787 3 45788888999999999999888888887554333332 12234444545676
No 54
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=30.26 E-value=70 Score=30.31 Aligned_cols=46 Identities=22% Similarity=0.195 Sum_probs=36.9
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCccc--chHHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLS--TPAVS 101 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~p--tP~~~ 101 (365)
.++.+|++--|.+. . .+++++.++...|++|+..+..++.| .|.+.
T Consensus 178 l~glkva~vGD~~n--n-va~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~ 225 (365)
T 4amu_A 178 LKNKKIVFIGDYKN--N-VGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVL 225 (365)
T ss_dssp CTTCEEEEESSTTS--H-HHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHH
T ss_pred CCCCEEEEECCCCc--c-hHHHHHHHHHHcCCEEEEECCccccCCCcHHHH
Confidence 45678888889874 3 68999999999999999998777887 66543
No 55
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=30.07 E-value=1.1e+02 Score=28.10 Aligned_cols=76 Identities=12% Similarity=0.119 Sum_probs=55.0
Q ss_pred EEEEec---------CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCC
Q 046205 58 LVVSGD---------GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPG 128 (365)
Q Consensus 58 Vvvg~D---------~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~ 128 (365)
++|+.. .|..+..=++.++..|...|++|... .-...-.+.-+++++...++++.+..+++=+||--
T Consensus 73 LIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~V~~~---~dlt~~em~~~l~~~~~~~h~~~d~~vv~ilsHG~- 148 (305)
T 1f1j_A 73 IIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVY---NDCSCAKMQDLLKKASEEDHTNAACFACILLSHGE- 148 (305)
T ss_dssp EEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEEEEEE---ESCCHHHHHHHHHHHHHSCGGGEEEEEEEEESCEE-
T ss_pred EEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCEEEEe---cCcCHHHHHHHHHHHHHhhcCCCCEEEEEEecCCC-
Confidence 677765 45667788999999999999999988 45566666667776533334567778888899943
Q ss_pred CCCCCCeEEEEcCCC
Q 046205 129 GPNEDFGIKYNMDNG 143 (365)
Q Consensus 129 ~~~~~nGiK~~~~~G 143 (365)
.| .++..+|
T Consensus 149 ----~~--~i~g~D~ 157 (305)
T 1f1j_A 149 ----EN--VIYGKDG 157 (305)
T ss_dssp ----TT--EEECSSS
T ss_pred ----CC--eEEecCC
Confidence 23 4566665
No 56
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=29.96 E-value=63 Score=30.51 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=43.7
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCC
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNP 127 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp 127 (365)
.+.+|++--|. + ..+++++.++...|++|+..+..++.|.+.+.-.+++. ....|.-|+-.|+|
T Consensus 152 ~glkva~vGD~---~-rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~------a~~~G~~v~~~~d~ 215 (355)
T 4a8p_A 152 EDCKVVFVGDA---T-QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKN------CEVSGGSFLVTDDA 215 (355)
T ss_dssp GGCEEEEESCC---C-HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHH------HHHHSCEEEEECCG
T ss_pred CCCEEEEECCC---c-hhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHH------HHHcCCeEEEECCH
Confidence 45678887787 3 45788889999999999999888888887554333332 11234444555777
No 57
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=29.76 E-value=61 Score=30.40 Aligned_cols=49 Identities=16% Similarity=0.208 Sum_probs=37.2
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIR 105 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~ 105 (365)
.++.+|++--|. ++ .+++++.++...|++|+..+..++.|.|.+.-.++
T Consensus 177 l~glkva~vGD~---~n-va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~ 225 (340)
T 4ep1_A 177 FKGIKLAYVGDG---NN-VCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKAL 225 (340)
T ss_dssp CTTCEEEEESCC---CH-HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHH
T ss_pred CCCCEEEEECCC---ch-hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 456788887786 33 78888888888899999998888888876543333
No 58
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=29.41 E-value=70 Score=24.80 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=32.7
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccch
Q 046205 55 GATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTP 98 (365)
Q Consensus 55 ~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP 98 (365)
-++|+|+.|....|....+.++.-....|.+++.+ ...+.+
T Consensus 6 ~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll---~v~~~~ 46 (150)
T 3tnj_A 6 YHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLI---HVLDNI 46 (150)
T ss_dssp CSEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEE---EEEC--
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEE---EEEcCc
Confidence 36899999999999988888888777789999988 555443
No 59
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=27.44 E-value=90 Score=29.03 Aligned_cols=45 Identities=24% Similarity=0.346 Sum_probs=36.7
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
.++.+|++--|.+ + ..+++++.++...|++|+..+..++.|.|.+
T Consensus 165 l~gl~va~vGD~~--~-rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~ 209 (325)
T 1vlv_A 165 LKGVKVVFMGDTR--N-NVATSLMIACAKMGMNFVACGPEELKPRSDV 209 (325)
T ss_dssp STTCEEEEESCTT--S-HHHHHHHHHHHHTTCEEEEESCGGGCCCHHH
T ss_pred cCCcEEEEECCCC--c-CcHHHHHHHHHHCCCEEEEECCccccCCHHH
Confidence 3567899988953 3 5789999999999999999988888888744
No 60
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=27.36 E-value=84 Score=28.96 Aligned_cols=45 Identities=24% Similarity=0.424 Sum_probs=37.1
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
.++.+|++--|.+ + ..+++++.++...|++|+..+..++.|.+.+
T Consensus 146 l~gl~va~vGD~~--~-rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~ 190 (307)
T 2i6u_A 146 LRGLRLSYFGDGA--N-NMAHSLLLGGVTAGIHVTVAAPEGFLPDPSV 190 (307)
T ss_dssp CTTCEEEEESCTT--S-HHHHHHHHHHHHTTCEEEEECCTTSCCCHHH
T ss_pred cCCeEEEEECCCC--c-CcHHHHHHHHHHCCCEEEEECCccccCCHHH
Confidence 4567899988973 3 6779999999999999999988888888744
No 61
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=26.76 E-value=72 Score=29.83 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=36.0
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
++.+|++--|.| + ..+++++.++...|++|+..+..++.|.|.+
T Consensus 154 ~gl~va~vGD~~--~-~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~ 197 (335)
T 1dxh_A 154 HDISYAYLGDAR--N-NMGNSLLLIGAKLGMDVRIAAPKALWPHDEF 197 (335)
T ss_dssp GGCEEEEESCCS--S-HHHHHHHHHHHHTTCEEEEECCGGGSCCHHH
T ss_pred CCeEEEEecCCc--c-chHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 456788888873 3 5779999999999999999988888888754
No 62
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=26.41 E-value=83 Score=29.13 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=35.9
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
.++.+|++--|. + ..+++++.++...|++|+..+..++.|.+.+
T Consensus 153 l~gl~va~vGD~---~-rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~ 196 (315)
T 1pvv_A 153 IKGVKVVYVGDG---N-NVAHSLMIAGTKLGADVVVATPEGYEPDEKV 196 (315)
T ss_dssp CTTCEEEEESCC---C-HHHHHHHHHHHHTTCEEEEECCTTCCCCHHH
T ss_pred cCCcEEEEECCC---c-chHHHHHHHHHHCCCEEEEECCccccCCHHH
Confidence 356788888886 3 4678999999999999999988888887744
No 63
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=26.29 E-value=2e+02 Score=23.13 Aligned_cols=82 Identities=17% Similarity=0.066 Sum_probs=57.5
Q ss_pred cCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCC
Q 046205 63 DGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDN 142 (365)
Q Consensus 63 D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~ 142 (365)
..|..+..=++.+...|.+-|++|... .-.+.-.+.-.++++-..+|+..+..|.+-.||-- .| .++..+
T Consensus 34 ~~R~Gt~~D~~~L~~~f~~LgF~V~~~---~dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~------~g-~i~g~D 103 (146)
T 2dko_A 34 TSRSGTDVDAANLRETFRNLKYEVRNK---NDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE------EG-IIFGTN 103 (146)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHHSCCTTEEEEEEEEESCEE------TT-EEEETT
T ss_pred ccCCCCHHHHHHHHHHHHHCCCEEEEe---eCCCHHHHHHHHHHHHHhhcCCCCeEEEEeccCCC------CC-EEEEeC
Confidence 357888888999999999999999988 44566666666666533446677888888889943 33 466677
Q ss_pred CCCCChhhHHHHHHHh
Q 046205 143 GGPAPEGITDKIYENT 158 (365)
Q Consensus 143 G~~i~~~~~~~Ie~~~ 158 (365)
| +++ .+.|.+.|
T Consensus 104 ~-~~~---l~~i~~~F 115 (146)
T 2dko_A 104 G-PVD---LKKITNFF 115 (146)
T ss_dssp E-EEE---HHHHHHTT
T ss_pred C-cEe---HHHHHHHh
Confidence 7 332 33455554
No 64
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=26.09 E-value=91 Score=23.79 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=28.0
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
++|+|+.|....|....+.++......|.+++.+
T Consensus 3 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll 36 (141)
T 1jmv_A 3 KHILVAVDLSEESPILLKKAVGIAKRHDAKLSII 36 (141)
T ss_dssp SEEEEEECCSTTHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ceEEEEecCchhhHHHHHHHHHHHHhcCCEEEEE
Confidence 4799999999999887777666666778888887
No 65
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=25.73 E-value=52 Score=25.39 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=33.5
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchH
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPA 99 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~ 99 (365)
++|+|+.|....|....+.++.-....|.+++.+ ...+.|.
T Consensus 3 ~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll---~v~~~~~ 43 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVGLQQLTGAELYIL---CVFKHHS 43 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEE---EEECCHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEE---EEecCcc
Confidence 4799999999888888777777777789999988 6777664
No 66
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=25.71 E-value=64 Score=30.02 Aligned_cols=45 Identities=27% Similarity=0.370 Sum_probs=34.1
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVS 101 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~ 101 (365)
.++.+|++--|. + ..+++++.++.-.|++|+..+..++.|-|.+.
T Consensus 155 l~glkva~vGD~---~-rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~ 199 (323)
T 3gd5_A 155 LAGLKLAYVGDG---N-NVAHSLLLGCAKVGMSIAVATPEGFTPDPAVS 199 (323)
T ss_dssp CTTCEEEEESCC---C-HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHH
T ss_pred CCCCEEEEECCC---C-cHHHHHHHHHHHcCCEEEEECCCcccCCHHHH
Confidence 356778887787 3 45677778888889999999888888877654
No 67
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=25.45 E-value=70 Score=30.18 Aligned_cols=65 Identities=15% Similarity=0.126 Sum_probs=45.9
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCC
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNP 127 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp 127 (365)
.+.+|++--|.+ + ..+++++.++...|++|+..+..++.|.|.+.-.++.. ....|..|+-.|+|
T Consensus 180 ~gl~ia~vGD~~--~-~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~------~~~~g~~v~~~~d~ 244 (358)
T 4h31_A 180 ADIQFAYLGDAR--N-NVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAI------AKQTGGKITLTENV 244 (358)
T ss_dssp GGCEEEEESCTT--S-HHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHH------HHHHTCEEEEESCH
T ss_pred CceEEEecCCCC--c-ccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHH------HHHcCCcceeccCH
Confidence 345788877875 3 58889999999999999999888888888776555544 22334444444555
No 68
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=25.02 E-value=1.8e+02 Score=25.98 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=46.0
Q ss_pred CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCC
Q 046205 64 GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNP 127 (365)
Q Consensus 64 ~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp 127 (365)
.|..+..=++.+...|...|++|... .-...-.+.-+++++-..+|+..+..+++=+||--
T Consensus 40 ~R~Gt~~D~~~L~~~f~~LgF~V~~~---~dlt~~em~~~l~~~~~~~h~~~D~~vv~ilSHG~ 100 (277)
T 1nw9_B 40 TRTGSNIDCEKLRRRFSSLHFMVEVK---GDLTAKKMVLALLELARQDHGALDCCVVVILSHGC 100 (277)
T ss_dssp CCTTHHHHHHHHHHHHHHTTEEEEEE---ESCCHHHHHHHHHHHHHSCCTTCSEEEEEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHHHCCCEEEEE---cCCCHHHHHHHHHHHHHhhcccCCeEEEEEeCCCC
Confidence 47778888999999999999999988 45555666666766533345667778888888843
No 69
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=24.90 E-value=1.1e+02 Score=27.93 Aligned_cols=41 Identities=15% Similarity=0.100 Sum_probs=27.5
Q ss_pred CceEEEecCCCC----------cH-----HHHHHHHHHHcCCc--eeeeeccccCCCCCC
Q 046205 222 KFTFCYDALHGV----------AG-----AYAKRIFVEELGAQ--ESSLLNCTPKEDFGG 264 (365)
Q Consensus 222 ~~kvvvd~~~Ga----------~~-----~~~~~i~l~~lg~~--v~~~~~~~~d~~f~~ 264 (365)
++.|++|+.|++ ++ ..+... .-.+|++ ++ ..|.+||...+.
T Consensus 195 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~A-AvA~GA~gl~I-E~H~~pd~al~D 252 (285)
T 3sz8_A 195 GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARA-GIAVGIAGLFL-EAHPDPDRARCD 252 (285)
T ss_dssp SCCEEEETTTTCC---------------HHHHHHH-HHHHCCSEEEE-EEESCGGGCSCS
T ss_pred CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHH-HHHhCCCEEEE-EeccChhccCCc
Confidence 589999999984 33 233444 4578998 54 378888877653
No 70
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=24.59 E-value=92 Score=29.01 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=38.0
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcc--cchHHHHHHHH
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLL--STPAVSAVIRE 106 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~--ptP~~~~av~~ 106 (365)
.+.+|++--|.+ + ..+++++.++...|++|+..+..++. |-|.+.-.+++
T Consensus 160 ~gl~va~vGD~~-~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~ 211 (328)
T 3grf_A 160 KGIKFAYCGDSM-N--NVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEE 211 (328)
T ss_dssp GGCCEEEESCCS-S--HHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHH
T ss_pred CCcEEEEeCCCC-c--chHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHH
Confidence 456788888987 2 37899999999999999999888888 77755433333
No 71
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=24.55 E-value=56 Score=25.21 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=27.8
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEe
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
++|+|+.|....|....+.++.-....|.+++.+
T Consensus 6 ~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll 39 (146)
T 3s3t_A 6 TNILVPVDSSDAAQAAFTEAVNIAQRHQANLTAL 39 (146)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ceEEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 6899999999888877777776666778888877
No 72
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=24.25 E-value=81 Score=29.46 Aligned_cols=44 Identities=23% Similarity=0.291 Sum_probs=35.8
Q ss_pred CCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 54 RGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 54 ~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
++.+|++--|.+ + ..+++++.++...|++|+..+..++.|.|.+
T Consensus 154 ~gl~ia~vGD~~--~-~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~ 197 (333)
T 1duv_G 154 NEMTLVYAGDAR--N-NMGNSMLEAAALTGLDLRLVAPQACWPEAAL 197 (333)
T ss_dssp GGCEEEEESCTT--S-HHHHHHHHHHHHHCCEEEEECCGGGCCCHHH
T ss_pred CCcEEEEECCCc--c-chHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 456788888873 3 5778999999999999999988888888744
No 73
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=23.97 E-value=2.5e+02 Score=23.06 Aligned_cols=74 Identities=14% Similarity=-0.024 Sum_probs=54.8
Q ss_pred CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCC
Q 046205 64 GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNG 143 (365)
Q Consensus 64 ~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G 143 (365)
.|..+..=+..+...|...|++|... .-.+.-.+.-.++++...+++..+.-|.+-.||-- .| .++..+|
T Consensus 49 ~R~Gt~~D~~~L~~~f~~LgF~V~~~---~dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~------~g-~i~g~D~ 118 (164)
T 1qtn_A 49 DRNGTHLDAGALTTTFEELHFEIKPH---DDCTVEQIYEILKIYQLMDHSNMDCFICCILSHGD------KG-IIYGTDG 118 (164)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHHSCCTTCSCEEEEEESCEE------TT-EEECTTS
T ss_pred CCCCcHHHHHHHHHHHHHCCCEEEEe---cCCCHHHHHHHHHHHHHhhccCCCEEEEEeCCCCC------CC-EEEeeCC
Confidence 78889999999999999999999988 44555566666666533446677888888889944 23 4677777
Q ss_pred CCCC
Q 046205 144 GPAP 147 (365)
Q Consensus 144 ~~i~ 147 (365)
..+.
T Consensus 119 ~~v~ 122 (164)
T 1qtn_A 119 QEAP 122 (164)
T ss_dssp CEEE
T ss_pred CEee
Confidence 6443
No 74
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=23.85 E-value=3.8e+02 Score=24.47 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=27.3
Q ss_pred CCeEEEEecCC-CChHHHHHHHHHHHHHcCCEEEEe
Q 046205 55 GATLVVSGDGR-YYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 55 ~~~Vvvg~D~R-~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
..+|+|.+... .+.+.++++++++|.+.|++|..+
T Consensus 251 ~~~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~ 286 (398)
T 1ycg_A 251 KAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLF 286 (398)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCeEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEE
Confidence 35677777666 457889999999999999887655
No 75
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=23.62 E-value=71 Score=24.42 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=31.4
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcc-cc
Q 046205 56 ATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLL-ST 97 (365)
Q Consensus 56 ~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~-pt 97 (365)
++|+|+.|....|....+.++.-....|.+++.+ ... +.
T Consensus 5 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll---~v~~~~ 44 (138)
T 1q77_A 5 KVLLVLTDAYSDCEKAITYAVNFSEKLGAELDIL---AVLEDV 44 (138)
T ss_dssp EEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEE---EECHHH
T ss_pred cEEEEEccCCHhHHHHHHHHHHHHHHcCCeEEEE---EEeccc
Confidence 5799999999999887777776666779999988 566 54
No 76
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=23.11 E-value=1.3e+02 Score=26.99 Aligned_cols=47 Identities=15% Similarity=0.077 Sum_probs=34.2
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHH--------HHHc-CCEEEEeCCCCc-ccchHHHHHHHHh
Q 046205 55 GATLVVSG---DGRYYSKDAIQIITKM--------AAAN-GVRRVWIGQNGL-LSTPAVSAVIRER 107 (365)
Q Consensus 55 ~~~Vvvg~---D~R~~s~~~~~a~a~g--------L~s~-G~~V~~~~~~g~-~ptP~~~~av~~~ 107 (365)
..+|++++ |.+.-+.. .++.. |..+ |++|+++ |. +|...+.-++++.
T Consensus 120 ~~~Vvlatv~gD~HdiG~~---iv~~~k~~~~~~~L~~~~G~eVi~L---G~~vp~e~iv~aa~e~ 179 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGID---AIMNMKGYAGHYGLERYEMIDAYNL---GSQVANEDFIKKAVEL 179 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHH---HHHSTTCBTTBCCGGGCTTEEEEEC---CSSBCHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCCchHHHH---HHhhhhcccchHHHHhcCCcEEEEC---CCCCCHHHHHHHHHHc
Confidence 34688876 88877754 44545 8999 9999999 54 6666677777776
No 77
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=22.62 E-value=75 Score=24.34 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=30.5
Q ss_pred CeEEEEecCCCC--hHHHHHHHHHHHHHcCCEEEEeCCCCcccch
Q 046205 56 ATLVVSGDGRYY--SKDAIQIITKMAAANGVRRVWIGQNGLLSTP 98 (365)
Q Consensus 56 ~~Vvvg~D~R~~--s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP 98 (365)
++|+|+-|.... |....+.++......|.+++.+ ...+.|
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~~a~l~ll---~v~~~~ 43 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARIDDAEVHFL---TVIPSL 43 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHHTCEEEEE---EEECC-
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhcCCeEEEE---EEecCC
Confidence 579999999988 7777777666667788898888 555544
No 78
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=21.39 E-value=95 Score=25.46 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=43.2
Q ss_pred ceEEEecCCCC--cHHHHHHHHHHHcCCceeeeeccccCCCCCCCCCCCChhcHHHHHHHhcCCCCCCCCCCCeEEEeeC
Q 046205 223 FTFCYDALHGV--AGAYAKRIFVEELGAQESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLGKSNTQDEPPEFGAAAD 300 (365)
Q Consensus 223 ~kvvvd~~~Ga--~~~~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p~~~~l~~l~~~v~~~~~~a~~~~adlgi~~D 300 (365)
.||++-+-|+. -...+.+. |++.|.+|+- +-+..+. .+-........+++.| . ++|+||.+.
T Consensus 8 mkI~igsDhaG~~lK~~i~~~-L~~~G~eV~D-~G~~~~~-----~~~dYpd~a~~va~~V--------~-~~d~GIliC 71 (148)
T 4em8_A 8 KRVFLSSDHAGVELRLFLSAY-LRDLGCEVFD-CGCDPKE-----HSVDYPDYVHDVVREV--------S-DTSFGVLIC 71 (148)
T ss_dssp SEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE-CCCCTTC-----SCCCGGGGTHHHHTTC--------B-TTBEEEEEE
T ss_pred eEEEEEECchhHHHHHHHHHH-HHHCCCEEEE-eCCCCCC-----CCCChHHHHHHHHHHH--------H-HhCeEEEEc
Confidence 57889888864 23346666 7889988752 2111000 0001122334566655 3 789999999
Q ss_pred CCCCeeeEee
Q 046205 301 GDADRNMILG 310 (365)
Q Consensus 301 ~DgDR~~~vd 310 (365)
|.|-=+.+.-
T Consensus 72 GTGiG~siaA 81 (148)
T 4em8_A 72 GTGIGMSIAA 81 (148)
T ss_dssp SSSHHHHHHH
T ss_pred cCcHHHHHHH
Confidence 9987776665
No 79
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=21.29 E-value=2e+02 Score=26.26 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=55.8
Q ss_pred EEEEec------CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhc-CCCCCcceeEEEeCCCCCCCC
Q 046205 58 LVVSGD------GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVG-SDGSKATGAFILTASHNPGGP 130 (365)
Q Consensus 58 Vvvg~D------~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~-~~~~~~~gGI~ITaShnp~~~ 130 (365)
++|+.. .|..+..=++.++..|...|++|... .-...-.+.-+++++-. .++++.+..+++-+||--
T Consensus 64 LII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~V~~~---~dlt~~em~~~l~~f~~~~dh~~~d~~vv~~lsHG~--- 137 (302)
T 3e4c_A 64 LIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVK---KNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGI--- 137 (302)
T ss_dssp EEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEEEEEE---
T ss_pred EEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEe---eCCCHHHHHHHHHHHHhhhccCCCCEEEEEEeccCc---
Confidence 778887 67888888999999999999999988 45666677777777521 134566778888889943
Q ss_pred CCCCeEEEEcCCC
Q 046205 131 NEDFGIKYNMDNG 143 (365)
Q Consensus 131 ~~~nGiK~~~~~G 143 (365)
.++ ++..++
T Consensus 138 --~~~--i~g~D~ 146 (302)
T 3e4c_A 138 --REG--ICGKKH 146 (302)
T ss_dssp --TTE--EECTTC
T ss_pred --CCe--EEeecc
Confidence 233 466665
No 80
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=21.29 E-value=97 Score=29.27 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=36.5
Q ss_pred cCCCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHH
Q 046205 53 VRGATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAV 100 (365)
Q Consensus 53 ~~~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~ 100 (365)
.++.+|++--|.+ + ..+++++.++...|++|+..+..++.|.+.+
T Consensus 174 l~gl~va~vGD~~--~-rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~ 218 (359)
T 2w37_A 174 LQGLTLTFMGDGR--N-NVANSLLVTGAILGVNIHIVAPKALFPTEET 218 (359)
T ss_dssp CTTCEEEEESCTT--S-HHHHHHHHHHHHHTCEEEEECCGGGSCCHHH
T ss_pred cCCeEEEEECCCc--c-chHHHHHHHHHHcCCEEEEECCccccCCHHH
Confidence 4567898888973 3 5778999999999999999988888887744
No 81
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=21.14 E-value=99 Score=28.49 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=34.2
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHH
Q 046205 55 GATLVVSGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVS 101 (365)
Q Consensus 55 ~~~Vvvg~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~ 101 (365)
+.+|++--|. + ..+++++.++...|++|+..+..++.|.|.+.
T Consensus 146 gl~va~vGD~---~-~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~ 188 (307)
T 3tpf_A 146 IAKVAFIGDS---N-NMCNSWLITAAILGFEISIAMPKNYKISPEIW 188 (307)
T ss_dssp CCEEEEESCS---S-HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHH
T ss_pred CCEEEEEcCC---C-ccHHHHHHHHHHcCCEEEEECCCccCCCHHHH
Confidence 6678777783 3 37889999998999999999888888877653
No 82
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=20.77 E-value=2.6e+02 Score=25.05 Aligned_cols=70 Identities=16% Similarity=0.023 Sum_probs=51.8
Q ss_pred CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhcCCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCCC
Q 046205 64 GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVGSDGSKATGAFILTASHNPGGPNEDFGIKYNMDNG 143 (365)
Q Consensus 64 ~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~G 143 (365)
.|..+..=++++...|...|++|... .-...-.+.-+++++-..++++.+..+++=+||-- + + .++..+|
T Consensus 63 ~R~Gt~~D~~~L~~~f~~LGF~V~~~---~dlt~~em~~~l~~f~~~dh~~~d~~vv~ilSHG~----~-g--~i~g~D~ 132 (277)
T 4ehd_A 63 SRSGTDVDAANLRETFRNLKYEVRNK---NDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE----E-G--IIFGTNG 132 (277)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEE---ESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEE----T-T--EEEETTE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEe---cCCCHHHHHHHHHHHHhhcccCCCEEEEEEEcCCC----C-C--EEEEeCC
Confidence 67778888999999999999999998 45566666767777633336677888888899943 2 3 3566666
No 83
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.74 E-value=4.2e+02 Score=27.60 Aligned_cols=47 Identities=19% Similarity=0.144 Sum_probs=31.2
Q ss_pred CCeEEE---EecCCCChHHHHHHHHHHHHHcCCEEEEeCCCCcc-cchHHHHHHHHh
Q 046205 55 GATLVV---SGDGRYYSKDAIQIITKMAAANGVRRVWIGQNGLL-STPAVSAVIRER 107 (365)
Q Consensus 55 ~~~Vvv---g~D~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~-ptP~~~~av~~~ 107 (365)
..+|++ |-|.+.-+. +.++..|...|++|+++ |.- |...+.-++++.
T Consensus 604 r~kVvlatvg~D~HdiG~---~iVa~~l~~~GfeVi~l---G~~v~~eeiv~aA~e~ 654 (762)
T 2xij_A 604 RPRLLVAKMGQDGHDRGA---KVIATGFADLGFDVDIG---PLFQTPREVAQQAVDA 654 (762)
T ss_dssp CCEEEEECCSSCCCCHHH---HHHHHHHHHTTCEEEEC---CTTCCHHHHHHHHHHT
T ss_pred CCEEEEEecCcchhhHHH---HHHHHHHHhCCeEEeeC---CCCCCHHHHHHHHHHc
Confidence 456776 456555554 44577888999999999 664 444555555665
No 84
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=20.66 E-value=3.4e+02 Score=24.89 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=26.7
Q ss_pred CCeEEEEecCC-CChHHHHHHHHHHHHHcCCEEEEe
Q 046205 55 GATLVVSGDGR-YYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 55 ~~~Vvvg~D~R-~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
..+|+|.+-.. .+++.+++.++++|.+.|++|..+
T Consensus 256 ~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~ 291 (404)
T 2ohh_A 256 DERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVY 291 (404)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEE
Confidence 35666655554 567899999999999999887665
No 85
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=20.62 E-value=1.1e+02 Score=26.90 Aligned_cols=75 Identities=9% Similarity=0.042 Sum_probs=45.5
Q ss_pred CCceEEEecCCCCcHH------HHHHHHHHHcCCceeeeeccccCCCCCCCCCCC--ChhcHHHHHHHhcCCCCCCCCCC
Q 046205 221 PKFTFCYDALHGVAGA------YAKRIFVEELGAQESSLLNCTPKEDFGGGHPDP--NLTYAKELVARMGLGKSNTQDEP 292 (365)
Q Consensus 221 ~~~kvvvd~~~Ga~~~------~~~~i~l~~lg~~v~~~~~~~~d~~f~~~~p~p--~~~~l~~l~~~v~~~~~~a~~~~ 292 (365)
.++||.+=-.++.++. .+.+. |+..|.+|.- +-+. . ....++ .......+++.|. +..
T Consensus 18 ~~mkiali~~~sqa~kN~~lKe~i~~~-L~~~G~eV~D-~G~~--s---~~d~~svDYPd~a~~vA~~V~-------~g~ 83 (231)
T 3c5y_A 18 QGMKIALIIENSQAAKNAVVHEALTTV-AEPLGHKVFN-YGMY--T---AEDKASLTYVMNGLLAGILLN-------SGA 83 (231)
T ss_dssp -CCEEEECCCGGGGGGHHHHHHHHHHH-HGGGTCEEEE-CCCC--S---TTCSSCCCHHHHHHHHHHHHH-------HTS
T ss_pred hcceEEEEecCCHhhhHHHHHHHHHHH-HHHCCCEEEE-eCCC--C---CCCCCCCChHHHHHHHHHHHH-------cCC
Confidence 4788888777777654 44555 6788988752 2111 0 000011 1234557788887 778
Q ss_pred CeEEEeeCCCCCeeeEe
Q 046205 293 PEFGAAADGDADRNMIL 309 (365)
Q Consensus 293 adlgi~~D~DgDR~~~v 309 (365)
+|+||.+.|.|-=+.+.
T Consensus 84 ~d~GIliCGTGiG~sIA 100 (231)
T 3c5y_A 84 ADFVVTGCGTGMGSMLA 100 (231)
T ss_dssp CSEEEEEESSSHHHHHH
T ss_pred CCeEEEEcCCcHHHHHH
Confidence 99999999997655444
No 86
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=20.15 E-value=2.3e+02 Score=24.80 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=24.4
Q ss_pred EEEEecCC--CChHHHHHHHHHHHHHcCCEEEEe
Q 046205 58 LVVSGDGR--YYSKDAIQIITKMAAANGVRRVWI 89 (365)
Q Consensus 58 Vvvg~D~R--~~s~~~~~a~a~gL~s~G~~V~~~ 89 (365)
++|..-.| ..++.+++.+++++...|++|..+
T Consensus 38 liI~GS~r~~s~t~~La~~~~~~l~~~g~eve~i 71 (247)
T 2q62_A 38 LILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVF 71 (247)
T ss_dssp EEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 44454555 457889999999999999988766
No 87
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=20.14 E-value=1.5e+02 Score=26.55 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=36.0
Q ss_pred CceEEEecCCCCcH-----HHHHHHHHHHcCCc--eeeeeccccCCCCCCCCCCC-ChhcHHHHHHHhc
Q 046205 222 KFTFCYDALHGVAG-----AYAKRIFVEELGAQ--ESSLLNCTPKEDFGGGHPDP-NLTYAKELVARMG 282 (365)
Q Consensus 222 ~~kvvvd~~~Ga~~-----~~~~~i~l~~lg~~--v~~~~~~~~d~~f~~~~p~p-~~~~l~~l~~~v~ 282 (365)
++.|++|+.|+.+. .+.... -.+|++ ++ ..|..||...+.+ +.. +...+.+|.+.++
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aA--va~Ga~Gl~i-E~H~~~d~al~D~-~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAA--YAIGADGIMV-EVHPEPEKALSDS-QQQLTFDDFLQLLKELE 256 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHH--HHTTCSEEEE-EBCSSGGGCSSCT-TTCBCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCccchHHHHHHHH--HHcCCCEEEE-EecCCccccCChh-hcCCCHHHHHHHHHHHH
Confidence 57799999999876 443333 478998 65 3677777665522 232 2346666666554
No 88
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=20.01 E-value=2.4e+02 Score=23.22 Aligned_cols=83 Identities=8% Similarity=0.001 Sum_probs=57.4
Q ss_pred CCCChHHHHHHHHHHHHHcCCEEEEeCCCCcccchHHHHHHHHhhc-CCCCCcceeEEEeCCCCCCCCCCCCeEEEEcCC
Q 046205 64 GRYYSKDAIQIITKMAAANGVRRVWIGQNGLLSTPAVSAVIRERVG-SDGSKATGAFILTASHNPGGPNEDFGIKYNMDN 142 (365)
Q Consensus 64 ~R~~s~~~~~a~a~gL~s~G~~V~~~~~~g~~ptP~~~~av~~~~~-~~~~~~~gGI~ITaShnp~~~~~~nGiK~~~~~ 142 (365)
.|..+..=+..+...|.+.|++|... .-.+.-.+.-.++++-. .+++..+..|.+-.||-- + | .++..+
T Consensus 52 ~R~Gt~~D~~~L~~~f~~LgF~V~~~---~dlt~~em~~~l~~~~~~~dh~~~dc~vv~ilSHG~----~--g-~i~g~D 121 (167)
T 1pyo_A 52 FRSGGDVDHSTLVTLFKLLGYDVHVL---CDQTAQEMQEKLQNFAQLPAHRVTDSCIVALLSHGV----E--G-AIYGVD 121 (167)
T ss_dssp CCTTHHHHHHHHHHHHHHTTEEEEEE---ESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEESCEE----T--T-EEECTT
T ss_pred cCCCcHHHHHHHHHHHHHCCCEEEEe---eCCCHHHHHHHHHHhhhhhhccCCCEEEEEeCCCCC----C--C-eEEEeC
Confidence 47888889999999999999999988 45556666666666522 234567778888889954 2 3 367777
Q ss_pred CCCCChhhHHHHHHHhh
Q 046205 143 GGPAPEGITDKIYENTK 159 (365)
Q Consensus 143 G~~i~~~~~~~Ie~~~~ 159 (365)
|..++- +.|.+.|.
T Consensus 122 ~~~v~l---~~i~~~F~ 135 (167)
T 1pyo_A 122 GKLLQL---QEVFQLFD 135 (167)
T ss_dssp SCEEEH---HHHHHHTS
T ss_pred CCEEcH---HHHHHHhc
Confidence 754432 35555543
Done!