Query 046207
Match_columns 458
No_of_seqs 420 out of 2938
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 09:47:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046207.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046207hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.8E-82 3.8E-87 615.7 41.6 421 20-454 9-443 (452)
2 PLN02533 probable purple acid 100.0 2.3E-80 5E-85 623.6 48.3 411 20-457 12-425 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 8.3E-48 1.8E-52 374.0 31.1 286 152-448 2-294 (294)
4 PTZ00422 glideosome-associated 100.0 2.4E-36 5.2E-41 294.3 26.9 260 152-449 24-330 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 2E-34 4.4E-39 277.6 24.1 248 155-436 1-277 (277)
6 KOG2679 Purple (tartrate-resis 100.0 4.2E-30 9.1E-35 230.8 18.4 272 141-449 32-330 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 100.0 2.5E-28 5.5E-33 233.1 21.4 230 153-431 3-260 (262)
8 PF09423 PhoD: PhoD-like phosp 100.0 7.9E-28 1.7E-32 246.9 23.4 289 61-357 4-381 (453)
9 COG3540 PhoD Phosphodiesterase 99.9 2.6E-26 5.7E-31 222.0 17.7 294 53-354 36-419 (522)
10 cd07402 MPP_GpdQ Enterobacter 99.9 4.8E-25 1E-29 207.8 18.5 217 156-422 1-237 (240)
11 cd07396 MPP_Nbla03831 Homo sap 99.9 1.1E-23 2.4E-28 201.3 18.3 197 155-390 1-246 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.9 4.7E-23 1E-27 197.9 22.0 241 142-436 4-264 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.9 5.8E-22 1.3E-26 187.9 18.1 190 157-360 2-217 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.9 4.1E-21 9E-26 177.2 14.9 150 155-357 1-165 (214)
15 cd08163 MPP_Cdc1 Saccharomyces 99.8 1E-18 2.3E-23 164.8 13.7 171 171-356 35-231 (257)
16 cd00842 MPP_ASMase acid sphing 99.8 1.4E-18 3E-23 169.0 12.7 193 159-356 42-264 (296)
17 PF00149 Metallophos: Calcineu 99.8 2.5E-19 5.4E-24 158.8 5.3 190 155-353 1-200 (200)
18 cd07383 MPP_Dcr2 Saccharomyces 99.7 5E-17 1.1E-21 148.6 15.3 151 154-357 2-180 (199)
19 TIGR03767 P_acnes_RR metalloph 99.7 3.2E-16 6.9E-21 155.6 17.7 94 260-356 290-395 (496)
20 cd07393 MPP_DR1119 Deinococcus 99.7 2.3E-16 5.1E-21 147.5 13.8 178 157-360 1-212 (232)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.7 4.4E-16 9.6E-21 140.8 14.6 167 157-354 1-174 (188)
22 TIGR03729 acc_ester putative p 99.7 8.6E-16 1.9E-20 144.5 14.3 177 156-355 1-223 (239)
23 COG1409 Icc Predicted phosphoh 99.6 6.6E-15 1.4E-19 143.0 15.6 179 155-353 1-193 (301)
24 cd07400 MPP_YydB Bacillus subt 99.6 7E-15 1.5E-19 127.2 12.7 116 157-356 1-128 (144)
25 cd07388 MPP_Tt1561 Thermus the 99.6 1.9E-14 4.1E-19 132.4 15.6 178 153-351 3-189 (224)
26 cd07385 MPP_YkuE_C Bacillus su 99.6 1E-14 2.2E-19 135.8 12.1 193 154-390 1-206 (223)
27 cd07404 MPP_MS158 Microscilla 99.6 3E-14 6.5E-19 126.4 11.6 145 157-355 1-151 (166)
28 PRK11340 phosphodiesterase Yae 99.5 1.6E-13 3.6E-18 131.2 15.1 195 151-389 46-253 (271)
29 cd00840 MPP_Mre11_N Mre11 nucl 99.5 1.9E-13 4.1E-18 127.1 14.6 187 156-355 1-203 (223)
30 KOG1432 Predicted DNA repair e 99.5 2.4E-12 5.2E-17 120.8 21.2 196 152-356 51-314 (379)
31 TIGR03768 RPA4764 metallophosp 99.5 3.4E-13 7.4E-18 132.8 15.4 92 261-353 292-411 (492)
32 PF14008 Metallophos_C: Iron/z 99.5 5.2E-14 1.1E-18 102.4 6.8 62 378-444 1-62 (62)
33 cd00838 MPP_superfamily metall 99.4 1.8E-12 3.8E-17 109.1 12.6 117 158-357 1-119 (131)
34 PF12850 Metallophos_2: Calcin 99.3 9.9E-12 2.1E-16 108.7 11.7 154 155-422 1-155 (156)
35 cd07379 MPP_239FB Homo sapiens 99.3 2E-11 4.3E-16 104.3 12.3 117 156-354 1-117 (135)
36 COG1408 Predicted phosphohydro 99.2 7.8E-11 1.7E-15 112.4 13.0 83 144-232 34-119 (284)
37 cd07397 MPP_DevT Myxococcus xa 99.2 2.6E-10 5.6E-15 105.3 14.7 64 155-232 1-64 (238)
38 cd08166 MPP_Cdc1_like_1 unchar 99.2 5E-11 1.1E-15 106.5 8.7 111 176-356 37-150 (195)
39 PF14582 Metallophos_3: Metall 99.2 2E-10 4.4E-15 102.4 11.3 177 154-354 5-219 (255)
40 PRK05340 UDP-2,3-diacylglucosa 99.2 2.7E-10 5.9E-15 107.2 12.7 176 155-355 1-201 (241)
41 COG2129 Predicted phosphoester 99.2 4E-10 8.7E-15 101.0 12.9 174 154-353 3-187 (226)
42 cd07384 MPP_Cdc1_like Saccharo 99.2 1.7E-10 3.8E-15 102.4 10.0 58 172-231 36-100 (171)
43 KOG3770 Acid sphingomyelinase 99.2 4.6E-10 1E-14 113.4 14.0 177 171-354 199-405 (577)
44 cd00841 MPP_YfcE Escherichia c 99.1 4.8E-10 1E-14 98.1 11.6 57 156-230 1-58 (155)
45 cd07389 MPP_PhoD Bacillus subt 99.1 6.7E-10 1.5E-14 103.7 12.8 164 156-357 1-208 (228)
46 cd08165 MPP_MPPE1 human MPPE1 99.1 4.2E-10 9.2E-15 98.4 9.3 54 175-230 32-88 (156)
47 cd07394 MPP_Vps29 Homo sapiens 99.1 3.4E-08 7.5E-13 88.3 20.8 167 156-437 1-170 (178)
48 TIGR00040 yfcE phosphoesterase 99.0 3.8E-09 8.2E-14 92.8 12.3 62 155-230 1-63 (158)
49 TIGR00583 mre11 DNA repair pro 99.0 5.6E-08 1.2E-12 97.3 19.7 44 153-196 2-57 (405)
50 PRK09453 phosphodiesterase; Pr 98.9 3.4E-08 7.4E-13 88.8 15.2 73 155-230 1-75 (182)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.9 1.9E-08 4.2E-13 94.0 13.9 74 158-231 2-81 (231)
52 cd08164 MPP_Ted1 Saccharomyces 98.9 5.1E-09 1.1E-13 93.5 9.2 59 171-232 34-112 (193)
53 cd07403 MPP_TTHA0053 Thermus t 98.9 7.5E-09 1.6E-13 87.5 9.4 50 307-357 58-107 (129)
54 cd00845 MPP_UshA_N_like Escher 98.9 1.1E-08 2.4E-13 97.0 10.4 174 155-355 1-208 (252)
55 COG1768 Predicted phosphohydro 98.9 4.3E-08 9.3E-13 84.0 12.2 159 170-356 31-202 (230)
56 cd07410 MPP_CpdB_N Escherichia 98.8 9.3E-08 2E-12 92.0 14.4 184 155-354 1-231 (277)
57 cd07398 MPP_YbbF-LpxH Escheric 98.8 2.7E-08 5.9E-13 92.0 9.4 181 158-356 1-204 (217)
58 cd07406 MPP_CG11883_N Drosophi 98.7 9.7E-08 2.1E-12 90.8 12.0 174 155-354 1-208 (257)
59 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.6 4.4E-07 9.5E-12 85.8 12.4 181 157-357 1-233 (262)
60 COG0420 SbcD DNA repair exonuc 98.6 1.9E-07 4.1E-12 94.4 10.6 73 155-231 1-88 (390)
61 KOG3662 Cell division control 98.6 3E-07 6.5E-12 90.3 11.2 117 152-281 46-183 (410)
62 cd07408 MPP_SA0022_N Staphyloc 98.5 8.7E-07 1.9E-11 84.3 12.4 181 155-355 1-215 (257)
63 COG0622 Predicted phosphoester 98.5 3.6E-06 7.7E-11 74.3 15.0 63 155-230 2-64 (172)
64 cd07412 MPP_YhcR_N Bacillus su 98.5 1.2E-06 2.6E-11 84.7 13.2 64 290-355 178-243 (288)
65 cd07411 MPP_SoxB_N Thermus the 98.5 2.7E-06 5.8E-11 81.3 15.3 148 181-354 50-220 (264)
66 cd07407 MPP_YHR202W_N Saccharo 98.4 1.4E-05 3E-10 76.7 17.1 184 153-353 4-231 (282)
67 cd07405 MPP_UshA_N Escherichia 98.4 1.8E-05 4E-10 76.3 17.9 189 155-355 1-223 (285)
68 cd07382 MPP_DR1281 Deinococcus 98.4 6.4E-06 1.4E-10 77.5 13.9 170 156-355 1-180 (255)
69 PRK09419 bifunctional 2',3'-cy 98.4 4E-06 8.7E-11 95.8 15.0 191 151-354 657-883 (1163)
70 COG2908 Uncharacterized protei 98.3 2E-06 4.4E-11 78.2 8.3 72 159-230 2-79 (237)
71 cd07409 MPP_CD73_N CD73 ecto-5 98.3 4.1E-06 8.9E-11 80.7 10.9 155 174-354 42-219 (281)
72 PRK04036 DNA polymerase II sma 98.3 7.1E-06 1.5E-10 85.2 13.2 80 152-231 241-343 (504)
73 TIGR00282 metallophosphoestera 98.3 2.4E-05 5.2E-10 73.9 15.5 196 155-392 1-205 (266)
74 TIGR00619 sbcd exonuclease Sbc 98.3 2.1E-06 4.5E-11 81.3 8.0 74 155-231 1-88 (253)
75 cd07425 MPP_Shelphs Shewanella 98.3 2E-06 4.3E-11 78.9 7.5 63 158-230 1-79 (208)
76 COG0737 UshA 5'-nucleotidase/2 98.3 1.1E-05 2.3E-10 84.7 13.4 188 151-353 23-247 (517)
77 cd07390 MPP_AQ1575 Aquifex aeo 98.3 2.6E-06 5.6E-11 75.6 7.2 40 181-230 42-81 (168)
78 PRK10966 exonuclease subunit S 98.2 3.8E-06 8.3E-11 84.8 7.5 74 155-231 1-87 (407)
79 PRK09558 ushA bifunctional UDP 98.1 5.5E-05 1.2E-09 79.9 14.7 189 151-354 31-258 (551)
80 PHA02546 47 endonuclease subun 98.1 1.1E-05 2.3E-10 79.9 8.6 75 155-231 1-89 (340)
81 TIGR01530 nadN NAD pyrophospha 98.0 7.3E-05 1.6E-09 78.8 12.2 146 181-354 49-219 (550)
82 cd07380 MPP_CWF19_N Schizosacc 97.9 2.4E-05 5.1E-10 67.5 6.7 65 158-229 1-68 (150)
83 cd08162 MPP_PhoA_N Synechococc 97.9 7.4E-05 1.6E-09 72.9 10.3 39 302-354 206-245 (313)
84 PRK11907 bifunctional 2',3'-cy 97.8 0.00038 8.2E-09 75.7 15.5 197 144-353 105-354 (814)
85 cd07391 MPP_PF1019 Pyrococcus 97.8 2.7E-05 5.8E-10 69.3 5.7 70 158-230 1-87 (172)
86 COG4186 Predicted phosphoester 97.7 0.00077 1.7E-08 57.0 12.2 66 156-230 5-85 (186)
87 PHA02239 putative protein phos 97.7 7.5E-05 1.6E-09 69.7 6.4 70 155-230 1-72 (235)
88 cd07423 MPP_PrpE Bacillus subt 97.7 9.3E-05 2E-09 69.3 6.9 65 156-230 2-79 (234)
89 TIGR00024 SbcD_rel_arch putati 97.6 0.00013 2.9E-09 67.6 6.6 70 155-230 15-101 (225)
90 PRK09418 bifunctional 2',3'-cy 97.5 0.0017 3.8E-08 70.5 14.9 48 302-355 243-291 (780)
91 PRK09419 bifunctional 2',3'-cy 97.5 0.0013 2.9E-08 75.4 14.4 48 302-354 233-281 (1163)
92 PRK00166 apaH diadenosine tetr 97.5 0.00017 3.6E-09 68.9 5.9 64 155-230 1-68 (275)
93 cd07386 MPP_DNA_pol_II_small_a 97.5 0.00027 5.9E-09 66.6 7.1 74 158-231 2-94 (243)
94 PRK13625 bis(5'-nucleosyl)-tet 97.5 0.00026 5.6E-09 66.8 6.8 66 155-230 1-78 (245)
95 COG1692 Calcineurin-like phosp 97.5 0.0092 2E-07 54.6 16.1 247 155-449 1-260 (266)
96 cd07424 MPP_PrpA_PrpB PrpA and 97.4 0.00021 4.5E-09 65.6 5.5 61 156-230 2-66 (207)
97 KOG2863 RNA lariat debranching 97.4 0.00079 1.7E-08 64.4 8.9 176 155-352 1-229 (456)
98 cd07413 MPP_PA3087 Pseudomonas 97.3 0.00047 1E-08 64.0 6.7 64 157-230 1-75 (222)
99 TIGR01390 CycNucDiestase 2',3' 97.3 0.0028 6E-08 67.8 12.9 46 302-353 194-240 (626)
100 PRK09968 serine/threonine-spec 97.3 0.00034 7.4E-09 64.7 5.3 61 156-230 16-80 (218)
101 PRK09420 cpdB bifunctional 2', 97.3 0.0046 9.9E-08 66.4 14.2 46 302-353 217-263 (649)
102 cd07387 MPP_PolD2_C PolD2 (DNA 97.2 0.0072 1.6E-07 56.9 13.2 136 157-298 2-176 (257)
103 PRK11439 pphA serine/threonine 97.2 0.00061 1.3E-08 63.0 5.3 61 156-230 18-82 (218)
104 cd07421 MPP_Rhilphs Rhilph pho 97.1 0.00092 2E-08 63.6 6.0 68 156-230 3-79 (304)
105 cd07422 MPP_ApaH Escherichia c 97.0 0.0009 1.9E-08 63.2 5.2 61 158-230 2-66 (257)
106 COG1407 Predicted ICC-like pho 97.0 0.0015 3.3E-08 60.0 6.3 73 155-230 20-109 (235)
107 cd00144 MPP_PPP_family phospho 97.0 0.0012 2.6E-08 61.2 5.4 63 159-231 2-68 (225)
108 PF00041 fn3: Fibronectin type 96.6 0.0091 2E-07 45.5 7.0 70 53-134 2-75 (85)
109 TIGR00668 apaH bis(5'-nucleosy 96.5 0.0035 7.7E-08 59.5 5.2 66 156-230 2-68 (279)
110 cd07381 MPP_CapA CapA and rela 96.5 0.011 2.3E-07 55.6 8.1 61 290-356 162-222 (239)
111 KOG2310 DNA repair exonuclease 96.5 0.0086 1.9E-07 60.5 7.6 45 152-196 11-67 (646)
112 KOG3325 Membrane coat complex 96.4 0.035 7.6E-07 46.7 9.7 85 331-448 97-182 (183)
113 PF13277 YmdB: YmdB-like prote 96.3 0.1 2.2E-06 48.5 12.9 192 158-392 1-200 (253)
114 smart00854 PGA_cap Bacterial c 96.3 0.018 3.8E-07 54.1 8.2 60 292-357 162-221 (239)
115 KOG3947 Phosphoesterases [Gene 96.1 0.16 3.4E-06 47.5 13.1 71 151-233 58-128 (305)
116 cd07416 MPP_PP2B PP2B, metallo 96.0 0.013 2.8E-07 56.9 6.1 66 156-231 44-114 (305)
117 COG5555 Cytolysin, a secreted 95.8 0.01 2.2E-07 55.3 4.1 174 182-356 127-337 (392)
118 smart00156 PP2Ac Protein phosp 95.7 0.022 4.7E-07 54.5 6.2 66 156-231 29-99 (271)
119 KOG4419 5' nucleotidase [Nucle 95.6 0.067 1.4E-06 55.1 9.1 59 286-355 211-271 (602)
120 cd07415 MPP_PP2A_PP4_PP6 PP2A, 95.3 0.03 6.5E-07 53.8 5.7 65 156-230 43-112 (285)
121 cd07420 MPP_RdgC Drosophila me 95.3 0.032 7E-07 54.4 5.8 66 156-231 52-123 (321)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 95.1 0.039 8.4E-07 53.3 5.6 66 156-231 51-121 (293)
123 PTZ00239 serine/threonine prot 95.1 0.045 9.7E-07 53.1 6.0 65 156-230 44-113 (303)
124 COG1311 HYS2 Archaeal DNA poly 95.0 0.071 1.5E-06 53.8 7.3 81 151-231 222-321 (481)
125 cd07418 MPP_PP7 PP7, metalloph 95.0 0.041 8.8E-07 54.7 5.6 67 155-231 66-138 (377)
126 PTZ00244 serine/threonine-prot 94.7 0.049 1.1E-06 52.6 5.1 66 157-231 54-123 (294)
127 KOG0196 Tyrosine kinase, EPH ( 94.6 0.15 3.2E-06 54.4 8.8 88 50-148 439-537 (996)
128 PTZ00480 serine/threonine-prot 94.6 0.053 1.1E-06 52.8 5.2 66 156-231 60-130 (320)
129 cd07417 MPP_PP5_C PP5, C-termi 94.5 0.093 2E-06 51.2 6.7 66 155-230 60-131 (316)
130 cd07419 MPP_Bsu1_C Arabidopsis 93.4 0.17 3.6E-06 49.4 6.1 21 330-350 242-262 (311)
131 PF09587 PGA_cap: Bacterial ca 93.0 0.27 5.7E-06 46.5 6.6 64 288-357 169-232 (250)
132 cd00063 FN3 Fibronectin type 3 91.5 1.2 2.6E-05 33.2 7.7 70 53-134 3-76 (93)
133 smart00060 FN3 Fibronectin typ 91.4 1.6 3.6E-05 31.4 8.2 71 54-134 4-76 (83)
134 KOG4221 Receptor mediating net 90.7 0.44 9.6E-06 53.1 5.9 80 52-146 617-711 (1381)
135 PF04042 DNA_pol_E_B: DNA poly 90.0 0.39 8.4E-06 43.9 4.2 76 157-232 1-92 (209)
136 KOG0372 Serine/threonine speci 83.7 2 4.4E-05 39.6 4.9 69 157-231 45-114 (303)
137 KOG3513 Neural cell adhesion m 82.8 6.1 0.00013 44.2 9.0 88 51-149 820-917 (1051)
138 PRK10301 hypothetical protein; 81.7 23 0.00051 29.4 10.3 14 52-65 43-56 (124)
139 KOG0374 Serine/threonine speci 77.9 2.1 4.5E-05 42.0 3.3 69 156-231 60-131 (331)
140 PTZ00235 DNA polymerase epsilo 73.7 12 0.00026 35.8 7.0 80 151-230 24-121 (291)
141 KOG0371 Serine/threonine prote 73.5 4.4 9.5E-05 37.7 3.9 67 156-230 61-130 (319)
142 PF01108 Tissue_fac: Tissue fa 72.5 32 0.0007 27.4 8.5 71 52-134 23-98 (107)
143 KOG4221 Receptor mediating net 72.4 21 0.00045 40.7 9.2 84 53-147 523-612 (1381)
144 KOG3513 Neural cell adhesion m 66.0 27 0.00058 39.4 8.6 88 53-149 617-715 (1051)
145 COG2372 CopC Uncharacterized p 63.3 13 0.00029 30.7 4.3 57 1-65 1-57 (127)
146 KOG0373 Serine/threonine speci 62.7 15 0.00032 33.5 4.8 64 157-230 48-116 (306)
147 PF06874 FBPase_2: Firmicute f 62.5 4.3 9.3E-05 42.7 1.7 51 172-232 175-225 (640)
148 KOG0375 Serine-threonine phosp 59.6 9.6 0.00021 37.2 3.3 68 157-231 90-159 (517)
149 COG2248 Predicted hydrolase (m 58.6 33 0.00071 32.2 6.4 76 152-230 174-249 (304)
150 COG5555 Cytolysin, a secreted 55.3 3.6 7.8E-05 38.8 -0.3 124 218-353 110-243 (392)
151 KOG2476 Uncharacterized conser 50.3 25 0.00054 35.7 4.6 67 154-228 5-75 (528)
152 KOG4258 Insulin/growth factor 50.0 41 0.00088 36.9 6.4 110 53-163 488-623 (1025)
153 cd02852 Isoamylase_N_term Isoa 42.9 1.8E+02 0.0039 23.5 8.9 22 112-133 48-69 (119)
154 PF10179 DUF2369: Uncharacteri 42.3 1.3E+02 0.0028 29.2 8.0 19 116-134 261-279 (300)
155 TIGR02855 spore_yabG sporulati 41.8 21 0.00046 33.7 2.6 50 290-352 115-165 (283)
156 PF05582 Peptidase_U57: YabG p 40.3 28 0.0006 33.1 3.1 50 290-352 116-166 (287)
157 cd07424 MPP_PrpA_PrpB PrpA and 39.1 28 0.0006 31.6 2.9 14 341-354 168-181 (207)
158 COG3855 Fbp Uncharacterized pr 38.3 24 0.00052 35.8 2.5 50 173-232 182-231 (648)
159 cd02856 Glycogen_debranching_e 34.4 52 0.0011 26.1 3.5 24 111-134 43-66 (103)
160 PF13473 Cupredoxin_1: Cupredo 33.6 45 0.00096 26.4 3.0 65 50-134 30-94 (104)
161 KOG4802 Adhesion-type protein 33.0 1.1E+02 0.0023 30.9 5.8 21 114-134 313-333 (516)
162 cd02853 MTHase_N_term Maltooli 32.8 56 0.0012 24.8 3.3 21 113-134 40-60 (85)
163 PRK09810 entericidin A; Provis 32.3 37 0.0008 22.2 1.8 20 5-24 2-21 (41)
164 PF01784 NIF3: NIF3 (NGG1p int 31.3 48 0.001 30.9 3.2 43 308-352 56-98 (241)
165 cd02860 Pullulanase_N_term Pul 29.0 67 0.0014 25.2 3.3 24 111-134 45-68 (100)
166 KOG0196 Tyrosine kinase, EPH ( 28.8 2E+02 0.0042 31.9 7.4 78 53-134 334-417 (996)
167 PF09294 Interfer-bind: Interf 28.7 47 0.001 26.1 2.4 66 53-134 5-86 (106)
168 PF10179 DUF2369: Uncharacteri 28.4 49 0.0011 32.0 2.8 50 116-165 16-78 (300)
169 TIGR03042 PS_II_psbQ_bact phot 28.2 45 0.00097 28.4 2.2 21 6-26 3-23 (142)
170 TIGR03413 GSH_gloB hydroxyacyl 27.0 94 0.002 29.1 4.4 46 184-230 120-166 (248)
171 PF14292 SusE: SusE outer memb 25.8 1.9E+02 0.0041 23.6 5.6 29 58-86 36-65 (122)
172 PF07353 Uroplakin_II: Uroplak 25.5 54 0.0012 28.3 2.1 32 117-148 104-140 (184)
173 COG2843 PgsA Putative enzyme o 24.1 1.7E+02 0.0037 29.3 5.7 59 292-357 213-272 (372)
174 PF03808 Glyco_tran_WecB: Glyc 24.0 2.2E+02 0.0048 24.9 6.0 52 286-349 58-109 (172)
175 PRK10799 metal-binding protein 23.6 1.2E+02 0.0027 28.3 4.5 44 308-354 59-102 (247)
176 PRK09968 serine/threonine-spec 22.9 70 0.0015 29.3 2.7 14 340-353 178-191 (218)
177 cd02850 Cellulase_N_term Cellu 22.8 3.4E+02 0.0075 20.6 8.5 23 112-134 55-78 (86)
178 cd07386 MPP_DNA_pol_II_small_a 22.7 58 0.0013 30.3 2.1 16 341-356 191-206 (243)
179 PHA03008 hypothetical protein; 22.5 1.5E+02 0.0033 26.6 4.4 44 307-355 163-206 (234)
180 PF00879 Defensin_propep: Defe 22.0 72 0.0016 22.0 1.8 15 5-19 1-15 (52)
181 PF09949 DUF2183: Uncharacteri 21.5 1.3E+02 0.0028 23.9 3.5 23 155-179 65-87 (100)
182 PF00753 Lactamase_B: Metallo- 21.3 1.3E+02 0.0029 25.6 4.1 24 203-226 170-193 (194)
183 TIGR03000 plancto_dom_1 Planct 21.3 2E+02 0.0044 21.5 4.2 24 111-134 25-48 (75)
184 cd01987 USP_OKCHK USP domain i 20.9 3.8E+02 0.0083 21.2 6.6 23 330-352 74-96 (124)
185 PRK13792 lysozyme inhibitor; P 20.8 4.2E+02 0.009 22.1 6.5 17 9-25 6-22 (127)
186 PRK10241 hydroxyacylglutathion 20.7 1.4E+02 0.003 28.0 4.2 45 185-230 122-167 (251)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-82 Score=615.72 Aligned_cols=421 Identities=41% Similarity=0.633 Sum_probs=368.8
Q ss_pred eeccCCcccccccCCCCCCCCCCcC--CCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCc---
Q 046207 20 GICNGGVTSRYVRKAEPSVDMPLAA--FPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRK--- 94 (458)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~--- 94 (458)
..|.++.++++.|...|+..++++. +..|...++|+||||+++++.. +|+|+|.|.+. ....|+|+...++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~ 86 (452)
T KOG1378|consen 9 SEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNSA 86 (452)
T ss_pred eeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCccccc
Confidence 4678999999999998888888776 6778888999999999999985 99999999974 348999998766522
Q ss_pred --eEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEeCCC-CccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHH
Q 046207 95 --HKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQLGSG-NATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQ 171 (458)
Q Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~g-~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~ 171 (458)
..+++.+..|...+++++++|+|++++|+|+|+||||||++ .+|++++|+|+| ++..+.+|+++||++.......
T Consensus 87 ~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s 164 (452)
T KOG1378|consen 87 ARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTS 164 (452)
T ss_pred cccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccc
Confidence 22333333343345789999999999999999999999984 347799999999 3668999999999999988778
Q ss_pred HHHHHHhCCCCcEEEEcCccccCCCCCCCch-hHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeec
Q 046207 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDN-RRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYH 250 (458)
Q Consensus 172 ~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~ 250 (458)
++..+.+..++|+|||.|||+|++. +. .+||.|.++++++++.+|+|++.||||+++.+.. .|..|.+||.
T Consensus 165 ~~~~~~~~~k~d~vlhiGDlsYa~~----~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~ 236 (452)
T KOG1378|consen 165 TLRNQEENLKPDAVLHIGDLSYAMG----YSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFN 236 (452)
T ss_pred hHhHHhcccCCcEEEEecchhhcCC----CCccchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeec
Confidence 8888887767999999999999998 45 6999999999999999999999999999765532 6899999999
Q ss_pred cccCCCCCCCCceEEEEcCeEEEEEecCCCcC--CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCC-CCccch
Q 046207 251 VPYRASQSTSPLWYSIKRASAYIIVLSSYSAY--GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSY-HYMEGE 327 (458)
Q Consensus 251 ~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~-~~~~~~ 327 (458)
||.++..+..++||||++|++|||+|+|+.++ .+..+|.+||+++|++++|++++|+||+.|.|+|+++.. +..+++
T Consensus 237 mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~ 316 (452)
T KOG1378|consen 237 MPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGE 316 (452)
T ss_pred cCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCc
Confidence 99988887788999999999999999999885 346899999999999998877999999999999998775 666665
Q ss_pred --HHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 046207 328 --SMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSY 405 (458)
Q Consensus 328 --~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~ 405 (458)
.+++.|++||.+++||++|.||.|+|||++|+++.++...+| +.|+.++++|+||++|+||+.++.+.. ..++|+|
T Consensus 317 ~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~~-~~~~p~~ 394 (452)
T KOG1378|consen 317 FESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PVHLVDGMAPIYITVGDGGNHEHLDPF-SSPQPEW 394 (452)
T ss_pred chhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cccccCCCCCEEEEEccCCcccccCcc-cCCCCcc
Confidence 889999999999999999999999999999999999877667 788899999999999999999986544 4489999
Q ss_pred cceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEeeecCCC
Q 046207 406 SAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPE 454 (458)
Q Consensus 406 s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~ 454 (458)
|+||+.+|||++|++.|+||+.|+|+++.|++.++.|+|||.|+++.+.
T Consensus 395 Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~ 443 (452)
T KOG1378|consen 395 SAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMV 443 (452)
T ss_pred cccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccc
Confidence 9999999999999999999999999999888888999999999987764
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=2.3e-80 Score=623.57 Aligned_cols=411 Identities=37% Similarity=0.661 Sum_probs=350.5
Q ss_pred eeccCCcccccccCCCCCCCCCCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEE
Q 046207 20 GICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHS 99 (458)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~ 99 (458)
..|.++.+.+|+|++.....+++. ..+.+...|+||||++++ + ++|+|+|.|.++ ..+.|+||++++.+..++.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~qvhls~~~-~-~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g 86 (427)
T PLN02533 12 LIVLAGNVLSYDRPGTRKNLVIHP--DNEDDPTHPDQVHISLVG-P-DKMRISWITQDS-IPPSVVYGTVSGKYEGSANG 86 (427)
T ss_pred HhhhccCcccccCCCccccccccc--cCCCCCCCCceEEEEEcC-C-CeEEEEEECCCC-CCCEEEEecCCCCCcceEEE
Confidence 345566889999976544433332 224566789999999998 3 699999999974 56899999999888999999
Q ss_pred EEEEEEe-cccccceEEEEEecCCCCCCEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHh
Q 046207 100 IIKTYRY-FNYSSGYIHHATIKRLKYDTKYFYQLGSGNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVS 178 (458)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~ 178 (458)
++++|++ ..+.++++|+|+|+||+|+|+|+|||+.+..+++++|+|+|. ..++||+++||+|.......+++++.+
T Consensus 87 ~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i~~ 163 (427)
T PLN02533 87 TSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHVSK 163 (427)
T ss_pred EEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHHHh
Confidence 9888875 346789999999999999999999999755567999999985 368999999999877666778888877
Q ss_pred CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCC
Q 046207 179 NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQS 258 (458)
Q Consensus 179 ~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~ 258 (458)
. +|||||++||++|++. ++..|+.|.+.++++.+.+|+|+++||||+...+.. ....+..|..+|.||..+.+.
T Consensus 164 ~-~pD~vl~~GDl~y~~~----~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~ 237 (427)
T PLN02533 164 W-DYDVFILPGDLSYANF----YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGS 237 (427)
T ss_pred c-CCCEEEEcCccccccc----hHHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCC
Confidence 6 9999999999999876 678999999999999889999999999998643321 134577889999999866555
Q ss_pred CCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCcc--chHHHHHHHHH
Q 046207 259 TSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYME--GESMRVAFESW 336 (458)
Q Consensus 259 ~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l 336 (458)
..+.||+|++|++|||+||++.++....+|++||+++|+++++++.+|+||++|+|+|++...+.++ ...+++.|+++
T Consensus 238 ~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~L 317 (427)
T PLN02533 238 TSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETL 317 (427)
T ss_pred CCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHH
Confidence 6789999999999999999998887789999999999999887788999999999999876554332 34578899999
Q ss_pred HHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEE
Q 046207 337 FVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHA 416 (458)
Q Consensus 337 l~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~ 416 (458)
|.+++||++|+||+|.|||+.|+++++ .+++|++||++|+||+.++....+.+++|+||+||+.+|||+
T Consensus 318 l~~~~VdlvlsGH~H~YeR~~p~~~~~-----------~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~ 386 (427)
T PLN02533 318 LYKARVDLVFAGHVHAYERFDRVYQGK-----------TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHG 386 (427)
T ss_pred HHHhCCcEEEecceecccccccccCCc-----------cCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEE
Confidence 999999999999999999999999876 457899999999999999876677788999999999999999
Q ss_pred EEEEecCceEEEEEEEcCCCceeeeeEEEEEeeecCCCCCC
Q 046207 417 MLEIKNRTHAHFTWHRNHDNEAVVADSQWLFNRYWYPEEEH 457 (458)
Q Consensus 417 ~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~~~ 457 (458)
+|+|.|.||++|+|++|+|++.++.|+|||.|.- .+..|
T Consensus 387 ~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~--~~~~~ 425 (427)
T PLN02533 387 QLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL--TEPGC 425 (427)
T ss_pred EEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc--CCCcc
Confidence 9999999999999999999988899999999972 23455
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=8.3e-48 Score=374.02 Aligned_cols=286 Identities=43% Similarity=0.762 Sum_probs=225.8
Q ss_pred CCCeEEEEEecCCCC-CCcHHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcc
Q 046207 152 DVPYIFGIIGDLGQT-YDSNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
..++||+++||+|.. ..+..+++++.+. .+|||||++||++|+++.. ...+|+.|.+.++++...+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--cchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 357999999999973 4567888888873 4999999999999987621 12689999999999988999999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC---CCChHHHHHHHHHhccccCCCCCe
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY---GKYTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+....... ....+..++.++........+.||+|++|+++||+|||.... ....+|++||+++|+++++.+.+|
T Consensus 80 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~ 156 (294)
T cd00839 80 ADYNFSFY---KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPW 156 (294)
T ss_pred cccCCCCc---ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCe
Confidence 85432211 111111123334333334467899999999999999998764 457999999999999976656789
Q ss_pred EEEEeccccccCCCCCCc--cchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEE
Q 046207 307 LIVLLHSPWYNSNSYHYM--EGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLT 384 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv 384 (458)
+||++|+|+++....... .....++.|.++|++++|+++|+||+|.|+|+.|+++++.. +.+..+.+++|++||+
T Consensus 157 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yiv 233 (294)
T cd00839 157 IIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHIV 233 (294)
T ss_pred EEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEEE
Confidence 999999999987654322 24677899999999999999999999999999999987642 3333346789999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 385 IGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 385 ~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
+|+||+.++..... .+.++|++++...+||++|++.++++|+++|+++.+|+ +.|+|+|.|
T Consensus 234 ~G~~G~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 234 IGAGGNDEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred ECCCccccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 99999987642222 12357999999999999999998889999999988998 999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=2.4e-36 Score=294.25 Aligned_cols=260 Identities=16% Similarity=0.230 Sum_probs=193.4
Q ss_pred CCCeEEEEEecCCCCCCcHHHHH----HHHhCCCCcEEEEcCccccCCCCCCCchhHHHH-HHHHHHHHh--hccceEEc
Q 046207 152 DVPYIFGIIGDLGQTYDSNQTFE----HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS-WGRFVEKST--AYQAWIWV 224 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~~~~l~----~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~l~--~~~P~~~v 224 (458)
+..++|+++||+|.+...+..++ ++.++.++||||.+||++ .++..+.++++|+. |.+.+.... ..+||++|
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~v 102 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTV 102 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEEe
Confidence 46799999999997655554443 444556999999999999 56666667888876 666665544 47899999
Q ss_pred cCCcccCCCCCCCCcc--------------cC---cccceeeccccCCCCCCCCceEEE----Ec-------------Ce
Q 046207 225 PGNHELDYAPEIGENV--------------PF---KPYTHRYHVPYRASQSTSPLWYSI----KR-------------AS 270 (458)
Q Consensus 225 ~GNHD~~~~~~~~~~~--------------~~---~~~~~~f~~P~~~~~~~~~~~ys~----~~-------------g~ 270 (458)
+||||+..+....-.+ .+ .....||.||. .||.+ .. ..
T Consensus 103 LGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~ 174 (394)
T PTZ00422 103 LGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMS 174 (394)
T ss_pred CCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCE
Confidence 9999985443211000 00 01235788884 47754 21 23
Q ss_pred EEEEEecCCCc-----CCC-ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccE
Q 046207 271 AYIIVLSSYSA-----YGK-YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDL 344 (458)
Q Consensus 271 ~~fi~Lds~~~-----~~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdl 344 (458)
+.||+|||... +.. ...|++||+++|+.+ ++.++|+||++|||+|+++..+ ....+++.|+|||++|+||+
T Consensus 175 v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~Vdl 251 (394)
T PTZ00422 175 VAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQVDL 251 (394)
T ss_pred EEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCcCE
Confidence 89999999642 222 478999999999754 3567899999999999987532 35678999999999999999
Q ss_pred EEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCc
Q 046207 345 VVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRT 424 (458)
Q Consensus 345 vl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~ 424 (458)
+|+||+|++||.. .+++.||++|+||+..+.. . ..++++.|....+||+.+++ +++
T Consensus 252 YisGHDH~lq~i~-------------------~~gt~yIvSGaGs~~~~~~-~---~~~~~s~F~~~~~GF~~~~l-~~~ 307 (394)
T PTZ00422 252 YISGYDRNMEVLT-------------------DEGTAHINCGSGGNSGRKS-I---MKNSKSLFYSEDIGFCIHEL-NAE 307 (394)
T ss_pred EEEccccceEEec-------------------CCCceEEEeCccccccCCC-C---CCCCCcceecCCCCEEEEEE-ecC
Confidence 9999999999964 3578899999999875421 1 22347889888999999998 556
Q ss_pred eEEEEEEEcCCCceeeeeEEEEEee
Q 046207 425 HAHFTWHRNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 425 ~~~~~~~~~~dg~~~~~D~~~i~~~ 449 (458)
.++++|+++.+|+ +++++++.++
T Consensus 308 ~l~~~fid~~~Gk--vL~~~~~~~~ 330 (394)
T PTZ00422 308 GMVTKFVSGNTGE--VLYTHKQPLK 330 (394)
T ss_pred EEEEEEEeCCCCc--EEEEeeeccc
Confidence 7999999767899 8999988553
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=100.00 E-value=2e-34 Score=277.60 Aligned_cols=248 Identities=20% Similarity=0.354 Sum_probs=178.0
Q ss_pred eEEEEEecCCCC-CCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHH-HHHHHHHHHhhccceEEccCCc
Q 046207 155 YIFGIIGDLGQT-YDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWD-SWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~-~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~-~~~~~~~~l~~~~P~~~v~GNH 228 (458)
++|+++||++.. .... ..+.++++..+|||||++||++|.++....+..+|. .|.+.+..+..++|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 489999999875 2222 233445554599999999999998875443344553 4555555554579999999999
Q ss_pred ccCCCCCCCCcccCcc--cceeeccccCCCCCCCCceEEEEcC------eEEEEEecCCCcC---------------CCC
Q 046207 229 ELDYAPEIGENVPFKP--YTHRYHVPYRASQSTSPLWYSIKRA------SAYIIVLSSYSAY---------------GKY 285 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~--~~~~f~~P~~~~~~~~~~~ys~~~g------~~~fi~Lds~~~~---------------~~~ 285 (458)
|+..... ....+.. +..+|.+| ..||+|+++ +++||+|||.... ...
T Consensus 81 D~~~~~~--~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
T cd07378 81 DYSGNVS--AQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLA 150 (277)
T ss_pred ccCCCch--heeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhH
Confidence 9853211 0111111 12333333 468999987 7999999997542 124
Q ss_pred hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceee
Q 046207 286 TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYN 365 (458)
Q Consensus 286 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~ 365 (458)
.+|++||+++|+++ +.+|+||++|||+++..... .....++.|.+++++++|+++|+||+|.+++..
T Consensus 151 ~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~-------- 217 (277)
T cd07378 151 EEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIK-------- 217 (277)
T ss_pred HHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeee--------
Confidence 89999999999985 34899999999998765422 135678899999999999999999999999875
Q ss_pred ecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCC
Q 046207 366 ITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDN 436 (458)
Q Consensus 366 ~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg 436 (458)
....++.||++|+||...+.........|.|..++...+||++|+|.+ ..++++|+. .||
T Consensus 218 ---------~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~-~~g 277 (277)
T cd07378 218 ---------DDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD-ADG 277 (277)
T ss_pred ---------cCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC-CCC
Confidence 223588999999999876543322222345788888999999999965 469999884 555
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.2e-30 Score=230.82 Aligned_cols=272 Identities=19% Similarity=0.272 Sum_probs=181.9
Q ss_pred EEEECCCCCCCCCCeEEEEEecCCCCCCcHH-----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH-HHHHHHH
Q 046207 141 FHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQ-----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS-WGRFVEK 214 (458)
Q Consensus 141 ~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~-----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~ 214 (458)
-++.-++. ++..++|+++||+|......+ ....+.+..++||||.+||++|.++..+.++.+++. |.+.+..
T Consensus 32 p~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 32 PRLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTA 109 (336)
T ss_pred hhhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccC
Confidence 34554444 568899999999986543222 233455556999999999999999987777777754 4444433
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEE----EE--cCeEEEEEecCCCc-----CC
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYS----IK--RASAYIIVLSSYSA-----YG 283 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys----~~--~g~~~fi~Lds~~~-----~~ 283 (458)
-.-..|||.+.||||+..+-...-..-+.....||..|. .||. .+ .-++.++++|+... +.
T Consensus 110 pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~yd 181 (336)
T KOG2679|consen 110 PSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYD 181 (336)
T ss_pred cccccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccc
Confidence 223569999999999865432111111344555665552 1221 11 11234444444321 11
Q ss_pred ---------CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 284 ---------KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 284 ---------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
....++.||+..|++ +.++|+||++|||+.+.+.. +...+++++|.|||++++||++++||+|+.|
T Consensus 182 w~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQ 256 (336)
T KOG2679|consen 182 WRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQ 256 (336)
T ss_pred cccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhh
Confidence 026788999999999 78899999999999876543 4467899999999999999999999999999
Q ss_pred cccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCC-CCCCCCcceeeCceeEEEEEEecCceEEEEEEEc
Q 046207 355 RTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYT-EPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRN 433 (458)
Q Consensus 355 r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~-~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 433 (458)
+.. ...+++-|+++|+|...-.. .... .-.|+.-.|.-..-||+.+++. ...+++.|++
T Consensus 257 his-----------------~~e~~iqf~tSGagSkaw~g-~~~~~~~~p~~lkF~YdgqGfmsv~is-~~e~~vvfyD- 316 (336)
T KOG2679|consen 257 HIS-----------------SPESGIQFVTSGAGSKAWRG-TDHNPEVNPKELKFYYDGQGFMSVEIS-HSEARVVFYD- 316 (336)
T ss_pred hcc-----------------CCCCCeeEEeeCCcccccCC-CccCCccChhheEEeeCCCceEEEEEe-cceeEEEEEe-
Confidence 964 11445567888877665332 1111 2234455666666799999994 5568899986
Q ss_pred CCCceeeeeEEEEEee
Q 046207 434 HDNEAVVADSQWLFNR 449 (458)
Q Consensus 434 ~dg~~~~~D~~~i~~~ 449 (458)
..|+ +..+....|+
T Consensus 317 ~~G~--~Lhk~~t~kr 330 (336)
T KOG2679|consen 317 VSGK--VLHKWSTSKR 330 (336)
T ss_pred ccCc--eEEEeecccc
Confidence 5688 6777665555
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.96 E-value=2.5e-28 Score=233.11 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=160.0
Q ss_pred CCeEEEEEecCCCCCC--c---------------HHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYD--S---------------NQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
.+++|+++||+|.+.. . ...++.+.+. .+||+||++||+++.+........+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5799999999998731 1 1223333332 28999999999999876221122456666677776
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC------CCChHH
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY------GKYTPQ 288 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~------~~~~~Q 288 (458)
+...+|+++++||||+...+. ...+..|...| +..+|++++++++||+|||.... ....+|
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 655789999999999743211 11112232222 23589999999999999996532 124789
Q ss_pred HHHHHHHhccccCCCCCeEEEEeccccccCCCCCC----ccchHHHHHHHHHHHHcCccEEEecccccccccccccccee
Q 046207 289 YAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY----MEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY 364 (458)
Q Consensus 289 ~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~ 364 (458)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+..
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------- 222 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------- 222 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE-------
Confidence 99999999997544567899999999985432211 1134678899999999999999999999987632
Q ss_pred eecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEE
Q 046207 365 NITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWH 431 (458)
Q Consensus 365 ~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~ 431 (458)
..|+.|+++++.|...+ . ...||..++|+++. ++++|+
T Consensus 223 ------------~~g~~~~~~~~~~~~~~-------~---------~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 ------------YGGLEMVVTSAIGAQLG-------N---------DKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred ------------ECCEEEEEcCceecccC-------C---------CCCCcEEEEECCCc-eeeeee
Confidence 23566888887775321 1 13699999996544 788876
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.96 E-value=7.9e-28 Score=246.87 Aligned_cols=289 Identities=16% Similarity=0.256 Sum_probs=153.2
Q ss_pred ecCCCCCceEEEEEcCCC--------CCCCeEEEEecCCCC--ceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEE
Q 046207 61 QGDHDGRSVIVSWVTPDE--------KYPNVVTHWEANSKR--KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFY 130 (458)
Q Consensus 61 ~~~~~~~~~~i~W~t~~~--------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 130 (458)
..|||..+.+|.|++..+ ..+..|+|..+.+.. .....++..+ ....++++++.|+||+|+|.|+|
T Consensus 4 asGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y 79 (453)
T PF09423_consen 4 ASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYY 79 (453)
T ss_dssp EEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEE
T ss_pred cccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEE
Confidence 346677899999998764 124466666554432 2333333322 34688999999999999999999
Q ss_pred EeCC---CCccceEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCC---C------
Q 046207 131 QLGS---GNATRRFHFTTPPKVGPDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDH---P------ 198 (458)
Q Consensus 131 ~v~~---g~~~~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~---~------ 198 (458)
|+.. +..++.++|||+|.. ....+||+++||.+.......+++++++..+|||+||+||.+|++.. .
T Consensus 80 ~~~~~~~~~~s~~g~~rT~p~~-~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 80 RFVVDGGGQTSPVGRFRTAPDG-DPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEecCCCCCCceEEEcCCCC-CCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 9987 345679999999753 33569999999998766668889999984499999999999999852 0
Q ss_pred ----------C----CchhHHHHH--HHHHHHHhhccceEEccCCcccCCCCCCCCc-------ccC-----cccceeec
Q 046207 199 ----------Q----HDNRRWDSW--GRFVEKSTAYQAWIWVPGNHELDYAPEIGEN-------VPF-----KPYTHRYH 250 (458)
Q Consensus 199 ----------~----~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~-------~~~-----~~~~~~f~ 250 (458)
. .+..+|..+ ...++.+.+.+|++.++.+||+..+...... ..+ .+++..+.
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0 112233332 2456677788999999999999543221100 000 11111221
Q ss_pred -cccCCC---CCCCCceEEEEcCe-EEEEEecCCCcCC---------------------CChHHHHHHHHHhccccCCCC
Q 046207 251 -VPYRAS---QSTSPLWYSIKRAS-AYIIVLSSYSAYG---------------------KYTPQYAWLEKELPKVNRAET 304 (458)
Q Consensus 251 -~P~~~~---~~~~~~~ys~~~g~-~~fi~Lds~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~ 304 (458)
+|.... ......|++|++|+ +.|++||+..... .+.+|++||++.|++ +.+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCC
Confidence 343211 12345789999999 9999999975311 158999999999998 568
Q ss_pred CeEEEEeccccccCCCC-----------CCccchHHHHHHHHHHHHcCcc--EEEecccccccccc
Q 046207 305 PWLIVLLHSPWYNSNSY-----------HYMEGESMRVAFESWFVQHKVD--LVVAGHVHSYERTN 357 (458)
Q Consensus 305 ~~~Iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~ll~~~~Vd--lvl~GH~H~y~r~~ 357 (458)
+|+||..-.|+...... ........|++|.++|.+.++. ++|+|.+|......
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 99999988877443211 1122356788999999988775 88999999876654
No 9
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.6e-26 Score=221.95 Aligned_cols=294 Identities=17% Similarity=0.218 Sum_probs=203.7
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-------CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-------KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYD 125 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 125 (458)
.|..-|-...+||.....|.|++-++ +....+||++.++..+.+-.++..+ ....++.+|+.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCC
Confidence 45233334456777899999997652 2344667777665444333333222 235789999999999999
Q ss_pred CEEEEEeCCC-CccceEEEECCCCCCCC-CCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCC-----
Q 046207 126 TKYFYQLGSG-NATRRFHFTTPPKVGPD-VPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHP----- 198 (458)
Q Consensus 126 t~Y~Y~v~~g-~~~~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~----- 198 (458)
+.|+||+..| ..+++++|||+|+++.. .-++|+..+|.|++.+...+.+.+.+. +|||+||+||.+|+++..
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~-~~D~viH~GDyIYeyg~~~~~~~ 190 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKE-EPDFVIHLGDYIYEYGPIPDEVS 190 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhc-CCCEEEEcCCeeeccCCcccccc
Confidence 9999999985 34679999999997654 456777777777777778888999888 899999999999998732
Q ss_pred --------------------CCchhHHHHH--HHHHHHHhhccceEEccCCcccCCCCCCCCcc--------cC-----c
Q 046207 199 --------------------QHDNRRWDSW--GRFVEKSTAYQAWIWVPGNHELDYAPEIGENV--------PF-----K 243 (458)
Q Consensus 199 --------------------~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~--------~~-----~ 243 (458)
.+++.+|..+ ...++...+..||++.|.+||+..+...+..+ .+ .
T Consensus 191 ~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~ 270 (522)
T COG3540 191 LNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAA 270 (522)
T ss_pred cccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHH
Confidence 1234445443 35567777889999999999996543211111 01 1
Q ss_pred ccceeec-cccCCCCC--CCCceEEEEcCe-EEEEEecCCCcC------C----------------CChHHHHHHHHHhc
Q 046207 244 PYTHRYH-VPYRASQS--TSPLWYSIKRAS-AYIIVLSSYSAY------G----------------KYTPQYAWLEKELP 297 (458)
Q Consensus 244 ~~~~~f~-~P~~~~~~--~~~~~ys~~~g~-~~fi~Lds~~~~------~----------------~~~~Q~~WL~~~L~ 297 (458)
+++.++. ||.+.... ....|.+|.+|+ +.|.+||+.... + .+.+|.+||++.|.
T Consensus 271 A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~ 350 (522)
T COG3540 271 ARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLG 350 (522)
T ss_pred HHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhh
Confidence 1222222 67654332 247899999999 789999997542 1 15899999999999
Q ss_pred cccCCCCCeEEEEeccccccCC--CC---C--------CccchHHHHHHHHHHHHcCcc--EEEeccccccc
Q 046207 298 KVNRAETPWLIVLLHSPWYNSN--SY---H--------YMEGESMRVAFESWFVQHKVD--LVVAGHVHSYE 354 (458)
Q Consensus 298 ~~~~~~~~~~Iv~~H~P~~~~~--~~---~--------~~~~~~~~~~l~~ll~~~~Vd--lvl~GH~H~y~ 354 (458)
+ +++.|+|+..-.|+--.. .. . ...-..-|+.|...++..++. ++|+|.+|...
T Consensus 351 ~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 351 A---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred h---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 9 789999998888862111 00 0 001234588999999998875 89999999643
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.93 E-value=4.8e-25 Score=207.81 Aligned_cols=217 Identities=19% Similarity=0.219 Sum_probs=150.2
Q ss_pred EEEEEecCCCCCCc---------HHH----HHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccce
Q 046207 156 IFGIIGDLGQTYDS---------NQT----FEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAW 221 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---------~~~----l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 221 (458)
||+++||+|.+... ... ++.+.+. .+||+||++||+++.+. ...|+.+.+.++.+ .+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~~--~~p~ 73 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-----PESYERLRELLAAL--PIPV 73 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-----HHHHHHHHHHHhhc--CCCE
Confidence 69999999987432 222 3333333 38999999999998754 45566666766665 6899
Q ss_pred EEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCC----CChHHHHHHHHHhc
Q 046207 222 IWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYG----KYTPQYAWLEKELP 297 (458)
Q Consensus 222 ~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~----~~~~Q~~WL~~~L~ 297 (458)
+.++||||... .+...|..... .....+|+|+.++++||+||+..... ...+|++||++.|+
T Consensus 74 ~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~ 139 (240)
T cd07402 74 YLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALA 139 (240)
T ss_pred EEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHH
Confidence 99999999631 11122211000 12356889999999999999875321 25789999999999
Q ss_pred cccCCCCCeEEEEeccccccCCCCCC-ccchHHHHHHHHHHHHc-CccEEEeccccccccccccccceeeecCCcccccC
Q 046207 298 KVNRAETPWLIVLLHSPWYNSNSYHY-MEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVK 375 (458)
Q Consensus 298 ~~~~~~~~~~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~ 375 (458)
++. .+++|+++|+|++....... ......++.+.+++.++ +|+++|+||+|......
T Consensus 140 ~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~------------------ 198 (240)
T cd07402 140 EAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS------------------ 198 (240)
T ss_pred hCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE------------------
Confidence 853 45689999999976532111 11123367899999999 99999999999976543
Q ss_pred CCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEec
Q 046207 376 DPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKN 422 (458)
Q Consensus 376 ~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~ 422 (458)
.+|+.++++|+.|.... +.++..++.+..+||..+.+.+
T Consensus 199 -~~g~~~~~~gs~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 199 -WGGIPLLTAPSTCHQFA-------PDLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred -ECCEEEEEcCcceeeec-------CCCCcccccccCCCCcEEEEec
Confidence 35678899998887542 2233445556678998888744
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.91 E-value=1.1e-23 Score=201.30 Aligned_cols=197 Identities=20% Similarity=0.225 Sum_probs=132.9
Q ss_pred eEEEEEecCCCCCC----------c----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 155 YIFGIIGDLGQTYD----------S----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----------~----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
|||+++||+|.... + ..+++.+.+. +||+||++||+++.+... ....|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~-~~d~vv~~GDlv~~~~~~--~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE-SLDFVVQLGDIIDGDNAR--AEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC-CCCEEEECCCeecCCCch--HHHHHHHHHHHHHhc--CCC
Confidence 79999999995531 1 2234445444 799999999999766411 124555555555544 589
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc-------------------
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA------------------- 281 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~------------------- 281 (458)
+++++||||+..... . .+...+ ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~----~---~~~~~~------~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPSR----E---YLLLYT------LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCccccccccH----h---hhhccc------ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 999999999743210 0 000001 01124569999999999999999531
Q ss_pred -------------C--CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEE
Q 046207 282 -------------Y--GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLV 345 (458)
Q Consensus 282 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlv 345 (458)
+ ....+|++||+++|+++.. +.+++||++|+|++...... ......++.+.++++++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 1247999999999998643 23568999999987654311 11122357888999996 89999
Q ss_pred EeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCC
Q 046207 346 VAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGN 390 (458)
Q Consensus 346 l~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~ 390 (458)
|+||+|.++... .+|+.|+++|+-..
T Consensus 221 ~~GH~H~~~~~~-------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 221 ISGHDHEGGYAQ-------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred EcCCcCCCCccc-------------------cCCeeEEEechhhc
Confidence 999999987532 45778888877554
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.91 E-value=4.7e-23 Score=197.90 Aligned_cols=241 Identities=17% Similarity=0.184 Sum_probs=149.0
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCC---------cH----HHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHH
Q 046207 142 HFTTPPKVGPDVPYIFGIIGDLGQTYD---------SN----QTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDS 207 (458)
Q Consensus 142 ~f~T~p~~~~~~~~~f~~~gD~~~~~~---------~~----~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~ 207 (458)
..+|.+. +..++||++++|+|.... .. ++++++.+. .+||+||++||+++.+. ...++.
T Consensus 4 ~~~~~~~--~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-----~~~~~~ 76 (275)
T PRK11148 4 LLTLPLA--GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-----SEAYQH 76 (275)
T ss_pred ccccccC--CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-----HHHHHH
Confidence 3456554 447899999999996321 12 234444443 37999999999998653 455666
Q ss_pred HHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc---CC-
Q 046207 208 WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA---YG- 283 (458)
Q Consensus 208 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~---~~- 283 (458)
+.+.++.+ .+|+++++||||... .+. ..+ +..+ ....++.+..++++||+|||... .+
T Consensus 77 ~~~~l~~l--~~Pv~~v~GNHD~~~--------~~~---~~~--~~~~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 77 FAEGIAPL--RKPCVWLPGNHDFQP--------AMY---SAL--QDAG---ISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred HHHHHhhc--CCcEEEeCCCCCChH--------HHH---HHH--hhcC---CCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 66666655 589999999999631 111 111 1100 01123334445699999999653 11
Q ss_pred CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC-CCCccchHHHHHHHHHHHHc-CccEEEecccccccccccccc
Q 046207 284 KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS-YHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYERTNRFSN 361 (458)
Q Consensus 284 ~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~-~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~~~~~ 361 (458)
...+|++||+++|+++. .+.+||++|||+..... +.........++|.++++++ +|+++|+||+|.....
T Consensus 139 l~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~----- 210 (275)
T PRK11148 139 LSEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL----- 210 (275)
T ss_pred eCHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-----
Confidence 25899999999999852 33456666665543322 11111223457899999998 8999999999985432
Q ss_pred ceeeecCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCC
Q 046207 362 VQYNITNGISTPVKDPSAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDN 436 (458)
Q Consensus 362 ~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg 436 (458)
..+|+.++++++.+..-.. ..+.+ .......||..+++.+++.+..++.+-.++
T Consensus 211 --------------~~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 211 --------------DWNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred --------------eECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 1356777777776643211 01111 122344699999997666676666654443
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.89 E-value=5.8e-22 Score=187.90 Aligned_cols=190 Identities=19% Similarity=0.240 Sum_probs=123.6
Q ss_pred EEEEecCCCCCCcHH-------HHHHHHhCCCCcEEEEcCccccCCCCC----CCchhHHHHHHHHHHHHhh--ccceEE
Q 046207 157 FGIIGDLGQTYDSNQ-------TFEHYVSNPKGQAVLFVGDLSYADDHP----QHDNRRWDSWGRFVEKSTA--YQAWIW 223 (458)
Q Consensus 157 f~~~gD~~~~~~~~~-------~l~~~~~~~~pd~vl~~GDl~y~~~~~----~~~~~~~~~~~~~~~~l~~--~~P~~~ 223 (458)
|++++|+|.+....+ .+...++..+||++|++||+++..... .....+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998743211 122333344999999999999765321 1235678777776655432 589999
Q ss_pred ccCCcccCCCCCCCCc-ccCcccceeeccccCCCCCCCCceEE--EEcCeEEEEEecCCCcC----------CCChHHHH
Q 046207 224 VPGNHELDYAPEIGEN-VPFKPYTHRYHVPYRASQSTSPLWYS--IKRASAYIIVLSSYSAY----------GKYTPQYA 290 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~-~~~~~~~~~f~~P~~~~~~~~~~~ys--~~~g~~~fi~Lds~~~~----------~~~~~Q~~ 290 (458)
++||||+......... ..+..|...+ ++ ...+|. ++.|+++||+|||.... ....+|++
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~-~~-------~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATG-RD-------GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheec-CC-------CccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 9999998532221111 1111121111 11 122333 34589999999997421 12489999
Q ss_pred HHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccc
Q 046207 291 WLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFS 360 (458)
Q Consensus 291 WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~ 360 (458)
||+++|+++ .+.+++||++|+|+....... ....+ .+.++|++++|+++||||+|.+++..|+-
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 999999975 345689999999996532211 11222 38999999999999999999999966653
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.86 E-value=4.1e-21 Score=177.22 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=110.3
Q ss_pred eEEEEEecCCCCCC-cH----HHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hccceEEcc
Q 046207 155 YIFGIIGDLGQTYD-SN----QTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVP 225 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-~~----~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~ 225 (458)
|||++++|+|.... .. ..++.+++ ..+||+||++||+++.+. ...+|+.+.+.++.+. ..+|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----NDAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----CHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 68999999997543 11 22233332 238999999999998765 4668888888888886 579999999
Q ss_pred CCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 226 GNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 226 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
||||. ++.+|+. ...+|++||+++|++. +.+
T Consensus 77 GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~~ 107 (214)
T cd07399 77 GNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PDR 107 (214)
T ss_pred CCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CCC
Confidence 99992 1223322 2489999999999984 345
Q ss_pred eEEEEeccccccCCCCCCcc-----chHHHHHHHHHHHHc-CccEEEecccccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYME-----GESMRVAFESWFVQH-KVDLVVAGHVHSYERTN 357 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~~ 357 (458)
++||++|+|++......... ....++.|.++++++ +|+++||||.|.+.+..
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 68999999998654322111 123456788999999 79999999999998765
No 15
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.79 E-value=1e-18 Score=164.81 Aligned_cols=171 Identities=18% Similarity=0.257 Sum_probs=110.3
Q ss_pred HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH----HHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccc
Q 046207 171 QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS----WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYT 246 (458)
Q Consensus 171 ~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~----~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~ 246 (458)
+.+..+.+..+||+||++||+++.+... ...+|.. |.+.+.++...+|++.++||||+....... ......|.
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~--~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDW--ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeC--cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 3444555555999999999999876511 2344543 333333322247999999999985432111 11223444
Q ss_pred eeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC-----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCC
Q 046207 247 HRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY-----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSY 321 (458)
Q Consensus 247 ~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~ 321 (458)
+.|. ...+++++|+++||+||+.... .....|.+||++.|+.. .....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCC
Confidence 4442 2468899999999999997432 12467999999998874 23345899999999865432
Q ss_pred CCc---c---------ch----HH-HHHHHHHHHHcCccEEEeccccccccc
Q 046207 322 HYM---E---------GE----SM-RVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 322 ~~~---~---------~~----~~-~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+ + +. .+ .+.-..||++.++.+||+||+|.|-..
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 111 0 00 01 234446788889999999999999654
No 16
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.78 E-value=1.4e-18 Score=168.98 Aligned_cols=193 Identities=20% Similarity=0.218 Sum_probs=123.5
Q ss_pred EEecCCCCCCcHH----HHHHHHhC-CCCcEEEEcCccccCCCCCCCchh----HHHHHHHHHHHHhhccceEEccCCcc
Q 046207 159 IIGDLGQTYDSNQ----TFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNR----RWDSWGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 159 ~~gD~~~~~~~~~----~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~----~~~~~~~~~~~l~~~~P~~~v~GNHD 229 (458)
-+|+.+.. .+.. +++.+.+. .+|||||++||++..+........ .+..+.+.++.....+|+++++||||
T Consensus 42 ~~G~~~CD-~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD 120 (296)
T cd00842 42 PWGDYGCD-SPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHD 120 (296)
T ss_pred CCcCcCCC-CcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCC
Confidence 35555532 2333 34444443 389999999999998763221111 23445566666667899999999999
Q ss_pred cCCCCCCC----CcccCcccceeec--cccCCC-CCCCCceEEEE-cCeEEEEEecCCCcCC-----------CChHHHH
Q 046207 230 LDYAPEIG----ENVPFKPYTHRYH--VPYRAS-QSTSPLWYSIK-RASAYIIVLSSYSAYG-----------KYTPQYA 290 (458)
Q Consensus 230 ~~~~~~~~----~~~~~~~~~~~f~--~P~~~~-~~~~~~~ys~~-~g~~~fi~Lds~~~~~-----------~~~~Q~~ 290 (458)
........ ....+..+...|. +|..+. ....+.||++. .++++||+|||...+. ....|++
T Consensus 121 ~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~ 200 (296)
T cd00842 121 SYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQ 200 (296)
T ss_pred CCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHH
Confidence 75321110 0111111222221 332111 11245789998 7899999999975421 2378999
Q ss_pred HHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEeccccccccc
Q 046207 291 WLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSYERT 356 (458)
Q Consensus 291 WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y~r~ 356 (458)
||+++|+++++.+ ..++|++|+|+....... .....+.|.+++++|. |.++|+||+|..+-.
T Consensus 201 WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 201 WLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999999975333 457889999997643221 1356789999999997 788999999987654
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.77 E-value=2.5e-19 Score=158.78 Aligned_cols=190 Identities=20% Similarity=0.227 Sum_probs=101.3
Q ss_pred eEEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHH-HHHHHHhhccceEEccCCcc
Q 046207 155 YIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWG-RFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNHD 229 (458)
+||+++||+|...... ..+.......++|+||++||+++.+. ....+.... ..........|+++++||||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 76 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGN----PSEEWRAQFWFFIRLLNPKIPVYFILGNHD 76 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSS----HHHHHHHHHHHHHHHHHTTTTEEEEE-TTS
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccc----ccccchhhhccchhhhhccccccccccccc
Confidence 6999999999875433 33333444449999999999999876 333322211 12334456799999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCC---hHHHHHHHHHhccccCCCCCe
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKY---TPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+.......................... ..+........................ ..+..|+...++. ...++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 151 (200)
T PF00149_consen 77 YYSGNSFYGFYDYQFEDYYGNYNYYYS--YFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDDP 151 (200)
T ss_dssp SHHHHHHHHHHHHHHSSEEECSSEEEC--TESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEESE
T ss_pred cceeccccccccccccccccccccccc--cCcceeeecccccccccccccccccccccchhccccccccccc---ccccc
Confidence 742110000000000000000000000 000001111111122211111111111 2333333333333 45678
Q ss_pred EEEEeccccccCCCCCCc--cchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 307 LIVLLHSPWYNSNSYHYM--EGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
+||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 152 ~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 152 VIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred eeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 999999999876543221 12456789999999999999999999986
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.74 E-value=5e-17 Score=148.61 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=100.6
Q ss_pred CeEEEEEecCCCCCCc------------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccc
Q 046207 154 PYIFGIIGDLGQTYDS------------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQA 220 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~------------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P 220 (458)
.+||++++|+|..... ...+.++++..+||+||++||+++...... ..+..+.+.++.+.. .+|
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~---~~~~~~~~~~~~l~~~~~p 78 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND---NSTSALDKAVSPMIDRKIP 78 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch---HHHHHHHHHHHHHHHcCCC
Confidence 5899999999986432 223444455559999999999998765211 134455555665543 699
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhcccc
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVN 300 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~ 300 (458)
+++++||||.. . .....|++||+++|++..
T Consensus 79 ~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~~ 108 (199)
T cd07383 79 WAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAALK 108 (199)
T ss_pred EEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHHh
Confidence 99999999910 0 123689999999999863
Q ss_pred --CCCCCeEEEEeccccccCCCC---------CCcc---chHHHH-HHHHHHHHcCccEEEecccccccccc
Q 046207 301 --RAETPWLIVLLHSPWYNSNSY---------HYME---GESMRV-AFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 301 --~~~~~~~Iv~~H~P~~~~~~~---------~~~~---~~~~~~-~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+....+.++++|+|+...... ...+ ...... .+..+.+..+|+++|+||+|.++...
T Consensus 109 ~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 109 KKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 224467999999998653211 0001 111223 34444566799999999999987654
No 19
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.71 E-value=3.2e-16 Score=155.64 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=72.2
Q ss_pred CCceEEEE-cCeEEEEEecCCCcC-----CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCC-----ccchH
Q 046207 260 SPLWYSIK-RASAYIIVLSSYSAY-----GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHY-----MEGES 328 (458)
Q Consensus 260 ~~~~ys~~-~g~~~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~-----~~~~~ 328 (458)
+..||+|+ .++++||+|||.... ....+|++||+++|++ .+.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 899999999997532 1258999999999998 3456799999999886533110 11122
Q ss_pred HHHHHHHHHHHc-CccEEEeccccccccc
Q 046207 329 MRVAFESWFVQH-KVDLVVAGHVHSYERT 356 (458)
Q Consensus 329 ~~~~l~~ll~~~-~Vdlvl~GH~H~y~r~ 356 (458)
..++|.++|+++ +|.++||||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999998 8999999999987543
No 20
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.69 E-value=2.3e-16 Score=147.47 Aligned_cols=178 Identities=19% Similarity=0.181 Sum_probs=106.5
Q ss_pred EEEEecCCCCC--------Cc---HHHHHHHHh---CC--CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 157 FGIIGDLGQTY--------DS---NQTFEHYVS---NP--KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 157 f~~~gD~~~~~--------~~---~~~l~~~~~---~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
+.+++|+|... .. .+.++++.+ .. +||+||++||+++... ........+.++.+ ..|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-----~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-----LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-----hHHHHHHHHHHHhC--CCC
Confidence 35789999763 11 233333332 22 8999999999986433 12222223333332 357
Q ss_pred eEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc----C---------C----
Q 046207 221 WIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA----Y---------G---- 283 (458)
Q Consensus 221 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~----~---------~---- 283 (458)
+++|+||||+... . . ..+.+. ++..+... ....++.++++.|++++.... + .
T Consensus 74 v~~V~GNHD~~~~-~---~---~~~~~~--l~~~~~~~--~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYWWG-S---A---SKLRKA--LEESRLAL--LFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCccccCC-C---H---HHHHHH--HHhcCeEE--eccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 8999999997311 0 1 111111 11100000 002334567888888763211 0 0
Q ss_pred CChHHHHHHHHHhccccCCC-CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccc
Q 046207 284 KYTPQYAWLEKELPKVNRAE-TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFS 360 (458)
Q Consensus 284 ~~~~Q~~WL~~~L~~~~~~~-~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~ 360 (458)
...+|++||++.|+++.... .+++|+++|+|++..... .+.+..++++++++++|+||+|..++..|+.
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 02568999999999864322 247899999998764321 2366788899999999999999999877664
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.69 E-value=4.4e-16 Score=140.79 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=101.7
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEI 236 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 236 (458)
|+++||+|........ ..+ +..++|+||++||+++.+. ......+ +.+.. ...|+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~-~~~-~~~~~D~vv~~GDl~~~~~-----~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~---- 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IIL-KAEEADAVIVAGDITNFGG-----KEAAVEI-NLLLA--IGVPVLAVPGNCDTPE---- 66 (188)
T ss_pred CEEEEecCCCHHHHHH-HHh-hccCCCEEEECCCccCcCC-----HHHHHHH-HHHHh--cCCCEEEEcCCCCCHH----
Confidence 5789999976432222 223 3348999999999998654 2222222 33332 2579999999999521
Q ss_pred CCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc------CCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 237 GENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA------YGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 237 ~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
........... ..+ ..+.++++.|+++++... .....+|++|+ +.|.. .+.+.+|++
T Consensus 67 ----~~~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 67 ----ILGLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ----HHHhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 00000000000 011 234567899999997532 12246889998 44444 334568999
Q ss_pred eccccccC-CCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 311 LHSPWYNS-NSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 311 ~H~P~~~~-~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
+|+|++.. ............+.+.+++++++++++||||+|.-.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 99999763 111110101124678889999999999999999864
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.67 E-value=8.6e-16 Score=144.53 Aligned_cols=177 Identities=14% Similarity=0.089 Sum_probs=104.9
Q ss_pred EEEEEecCCCCCCc---HH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 156 IFGIIGDLGQTYDS---NQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
||++++|+|..... .. .++.+.+. ++|+||++||++.... ....+.+.+..+ ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~-~~d~vv~~GDl~~~~~-------~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ-KIDHLHIAGDISNDFQ-------RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc-CCCEEEECCccccchh-------hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999965221 22 23334444 8999999999997421 122333333332 358999999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcC--------------------------
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAY-------------------------- 282 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~-------------------------- 282 (458)
|+..... +..+...+. .....+.++.+..++++|++++...++
T Consensus 72 D~~~~~~------~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741110 011111110 000112233344467888888842211
Q ss_pred C-----CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC----C--CCcc-c-hHHHHHHHHHHHHcCccEEEecc
Q 046207 283 G-----KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS----Y--HYME-G-ESMRVAFESWFVQHKVDLVVAGH 349 (458)
Q Consensus 283 ~-----~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~----~--~~~~-~-~~~~~~l~~ll~~~~Vdlvl~GH 349 (458)
. ...+|++||++.|+++. .+.+||++|+|+..... . .... . ....+.|.+++++++|+++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 0 02678999999998852 24489999999854211 0 1100 0 11246888999999999999999
Q ss_pred cccccc
Q 046207 350 VHSYER 355 (458)
Q Consensus 350 ~H~y~r 355 (458)
+|.-..
T Consensus 218 ~H~~~~ 223 (239)
T TIGR03729 218 LHRRFG 223 (239)
T ss_pred ccCCCC
Confidence 998653
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.63 E-value=6.6e-15 Score=142.96 Aligned_cols=179 Identities=18% Similarity=0.199 Sum_probs=115.5
Q ss_pred eEEEEEecCCCC--CC-cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCC
Q 046207 155 YIFGIIGDLGQT--YD-SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGN 227 (458)
Q Consensus 155 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 227 (458)
++|+.++|+|.. .. ....+ +++... +||+||++||+++.+. ...++...++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~-~~D~~v~tGDl~~~~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQL-KPDLLVVTGDLTNDGE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcC-CCCEEEEccCcCCCCC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 589999999987 22 23333 333333 8999999999999853 55666666677655557899999999
Q ss_pred cccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEc-CeEEEEEecCCCcC----CCChHHHHHHHHHhccccCC
Q 046207 228 HELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKR-ASAYIIVLSSYSAY----GKYTPQYAWLEKELPKVNRA 302 (458)
Q Consensus 228 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~-g~~~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 302 (458)
||.... ....+...+... ...+..... ++++++++|+...- ..+..|++||++.|++....
T Consensus 75 HD~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVV-------NGEAFSDQFFNR-------YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCch-------HHHHhhhhhccc-------CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 997421 111222122111 011111122 67899999997642 23589999999999985332
Q ss_pred CCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEecccccc
Q 046207 303 ETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSY 353 (458)
Q Consensus 303 ~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y 353 (458)
....+|+++|||+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112467777777765443322222333456777888888 999999999976
No 24
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.61 E-value=7e-15 Score=127.20 Aligned_cols=116 Identities=22% Similarity=0.246 Sum_probs=84.6
Q ss_pred EEEEecCCCCCCcHH-----------HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc-cceEEc
Q 046207 157 FGIIGDLGQTYDSNQ-----------TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY-QAWIWV 224 (458)
Q Consensus 157 f~~~gD~~~~~~~~~-----------~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v 224 (458)
|++++|+|.+..... .++.+.+ .++|+|+++||+++.+. ...|+.+.+.++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKA-LDPDLVVITGDLTQRGL-----PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhc-cCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 1222333 39999999999998764 46677777777777543 699999
Q ss_pred cCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCC
Q 046207 225 PGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAET 304 (458)
Q Consensus 225 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 304 (458)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 305 PWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 305 ~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
|+++|+|++....... .....++.+.+++++++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGR-ERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCcccc-ccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 8899999976533211 11114667999999999999999999987653
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.61 E-value=1.9e-14 Score=132.37 Aligned_cols=178 Identities=11% Similarity=0.136 Sum_probs=102.9
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 153 VPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
...|++++||+|......+.+.+..++.++|+||++||+++.+. ..+.+..+.+.+..+ ..|+++++||||...
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~----~~~~~~~~l~~l~~l--~~pv~~V~GNhD~~v 76 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA----KSEDYAAFFRILGEA--HLPTFYVPGPQDAPL 76 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC----CHHHHHHHHHHHHhc--CCceEEEcCCCChHH
Confidence 45799999999965333333333333338999999999998652 123333334433332 479999999999410
Q ss_pred CCCCCCcccCc-ccceeeccccCCCCCCCCceEEEEc-CeEEEEEecCCCcC--CCChHHH----HHHHH-HhccccCCC
Q 046207 233 APEIGENVPFK-PYTHRYHVPYRASQSTSPLWYSIKR-ASAYIIVLSSYSAY--GKYTPQY----AWLEK-ELPKVNRAE 303 (458)
Q Consensus 233 ~~~~~~~~~~~-~~~~~f~~P~~~~~~~~~~~ys~~~-g~~~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~~ 303 (458)
...+. .|......|.. .. ....+ ..+ |+++|++|+....+ ...++|. +||.+ .|+...+..
T Consensus 77 ------~~~l~~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 77 ------WEYLREAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred ------HHHHHHHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 00000 11101111210 00 11122 333 56999999965543 2234442 56433 222221123
Q ss_pred CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccc
Q 046207 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVH 351 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H 351 (458)
.+..|+++|+|++..+..|. -.+.+..+++++++.+++|||.|
T Consensus 147 ~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 147 DYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 44689999999998743232 24578889999999999999999
No 26
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.59 E-value=1e-14 Score=135.84 Aligned_cols=193 Identities=20% Similarity=0.095 Sum_probs=111.1
Q ss_pred CeEEEEEecCCCCCCc-----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 154 PYIFGIIGDLGQTYDS-----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
++||++++|+|..... .+.++.+.+. +||+||++||+++... ... +.+.+.++.+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~-~~d~vl~~GD~~~~~~----~~~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINAL-KPDLVVLTGDLVDGSV----DVL--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhcc-CCCEEEEcCcccCCcc----hhh--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987432 2233334444 8999999999998764 111 34556666665678999999999
Q ss_pred ccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeE--EEEEecCCCcCCCChHHHHHHHHHhccccCCCCCe
Q 046207 229 ELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASA--YIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~--~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
|+..... ..+........+. ...+....++.++. .+++++.. ....+++.+.+++. .+.++
T Consensus 74 D~~~~~~----~~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~~------~~~~~~~~~~~~~~--~~~~~ 136 (223)
T cd07385 74 DYYSGDE----ENWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDDG------LGRRPDLEKALKGL--DEDDP 136 (223)
T ss_pred ccccCch----HHHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccCc------cccCCCHHHHHhCC--CCCCC
Confidence 9753211 0000010000000 01223444555543 34443321 12234566666654 34567
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccccccccee------eecCCcccccCCCCCC
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQY------NITNGISTPVKDPSAP 380 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~------~~~~g~~~~~~~~~g~ 380 (458)
.|++.|.|.+.. .+.+.++|++++||+|..|...|...... ....|. +...+..
T Consensus 137 ~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~---~~~~~~~ 196 (223)
T cd07385 137 NILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGL---YRKGGSQ 196 (223)
T ss_pred EEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceE---EEECCEE
Confidence 999999986321 12567899999999999997765543210 001111 1234456
Q ss_pred eEEEeCCCCC
Q 046207 381 VYLTIGDGGN 390 (458)
Q Consensus 381 ~yiv~G~gG~ 390 (458)
+||..|.|..
T Consensus 197 ~~Vs~G~G~~ 206 (223)
T cd07385 197 LYVSRGLGTW 206 (223)
T ss_pred EEEcCCccCC
Confidence 7787777764
No 27
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.56 E-value=3e-14 Score=126.37 Aligned_cols=145 Identities=19% Similarity=0.307 Sum_probs=87.1
Q ss_pred EEEEecCCCCCCcHHH-HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 157 FGIIGDLGQTYDSNQT-FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~-l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
|+++||+|........ +.......++|+++++||+++... ...+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~-----~~~~~~---~~~~~~~~~~v~~v~GNHD~~---- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD-----APRFAP---LLLALKGFEPVIYVPGNHEFY---- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc-----hHHHHH---HHHhhcCCccEEEeCCCcceE----
Confidence 5789999987543222 212223348999999999998653 222221 223333467999999999952
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCC-ChHHHHHHHHHhccccCCCCCeEEEEeccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGK-YTPQYAWLEKELPKVNRAETPWLIVLLHSP 314 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P 314 (458)
+.|++.....++.. ..++.+|+.++++ +.+||++|||
T Consensus 69 -----------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 69 -----------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred -----------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 11222211111111 2344555554444 3489999999
Q ss_pred cccCCCCC----CccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 315 WYNSNSYH----YMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
+....... .......++.+..++++++|++++|||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 97654321 111224455677888899999999999998743
No 28
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.53 E-value=1.6e-13 Score=131.22 Aligned_cols=195 Identities=14% Similarity=0.091 Sum_probs=108.6
Q ss_pred CCCCeEEEEEecCCCCCC-cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 151 PDVPYIFGIIGDLGQTYD-SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
...++||+++||+|.+.. ....+ +.+.+. +||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~-~pDlVli~GD~~d~~~-----~~~~~~~~~~L~~L~~~~pv~~V~ 119 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQ-KPDLILLGGDYVLFDM-----PLNFSAFSDVLSPLAECAPTFACF 119 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhc-CCCEEEEccCcCCCCc-----cccHHHHHHHHHHHhhcCCEEEec
Confidence 345799999999998632 22223 333344 9999999999997432 123445666777776668999999
Q ss_pred CCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcC--eEEEEEecCCCcCCCChHHHHHHHHHhccccCCC
Q 046207 226 GNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRA--SAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAE 303 (458)
Q Consensus 226 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g--~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 303 (458)
||||+..... ....+...+ -..+.....+....+..+ .+.++++|.... +... ..+.+++
T Consensus 120 GNHD~~~~~~-----~~~~~~~~l--~~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----- 181 (271)
T PRK11340 120 GNHDRPVGTE-----KNHLIGETL--KSAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----- 181 (271)
T ss_pred CCCCcccCcc-----chHHHHHHH--HhcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----
Confidence 9999742110 000111111 001111112334445444 367778764221 1111 1122222
Q ss_pred CCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceee------ecCCcccccCCC
Q 046207 304 TPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYN------ITNGISTPVKDP 377 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~------~~~g~~~~~~~~ 377 (458)
....|++.|.|-.- +.+.+.++||+||||+|.-|-..|..+.... ...|. +...
T Consensus 182 ~~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G~---~~~~ 241 (271)
T PRK11340 182 NLPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGL---NAFG 241 (271)
T ss_pred CCCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCCc---EEeC
Confidence 34589999999631 1234578999999999998876554322110 01121 1223
Q ss_pred CCCeEEEeCCCC
Q 046207 378 SAPVYLTIGDGG 389 (458)
Q Consensus 378 ~g~~yiv~G~gG 389 (458)
+..+||..|-|.
T Consensus 242 ~~~l~Vs~G~G~ 253 (271)
T PRK11340 242 ERQIYTTRGVGS 253 (271)
T ss_pred CcEEEEeCCccC
Confidence 455677777774
No 29
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.52 E-value=1.9e-13 Score=127.07 Aligned_cols=187 Identities=17% Similarity=0.109 Sum_probs=104.9
Q ss_pred EEEEEecCCCCCCc------------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hcc
Q 046207 156 IFGIIGDLGQTYDS------------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQ 219 (458)
Q Consensus 156 ~f~~~gD~~~~~~~------------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~ 219 (458)
||++++|+|.+... ..++++++ .+.++|+||++||+++.... ....+..+.+.++.+. ..+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 77 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP---SPEALELLIEALRRLKEAGI 77 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC---CHHHHHHHHHHHHHHHHCCC
Confidence 68999999987431 12233332 22399999999999986541 2334555666666664 378
Q ss_pred ceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccc
Q 046207 220 AWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKV 299 (458)
Q Consensus 220 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 299 (458)
|+++++||||........ .....+. .+..-.............+...++.|++++..... ....+.++++..+...
T Consensus 78 ~v~~~~GNHD~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~ 153 (223)
T cd00840 78 PVFIIAGNHDSPSRLGAL--SPLLALS-GLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPL 153 (223)
T ss_pred CEEEecCCCCCccccccc--cchHhhC-cEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhcc
Confidence 999999999975322110 0000010 00000000000011223344556888988864321 1133444444454443
Q ss_pred cCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 300 NRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 300 ~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+....|+++|.|+......... . .......+...++|++++||.|..+.
T Consensus 154 --~~~~~~Il~~H~~~~~~~~~~~~---~-~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 154 --DPDDFNILLLHGGVAGAGPSDSE---R-APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred --CCCCcEEEEEeeeeecCCCCccc---c-cccCcHhhcCcCCCEEECCCcccCee
Confidence 34567899999998654322111 0 12333456678899999999998764
No 30
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.52 E-value=2.4e-12 Score=120.76 Aligned_cols=196 Identities=19% Similarity=0.252 Sum_probs=108.4
Q ss_pred CCCeEEEEEecCCCCCC--------------------cHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYD--------------------SNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRF 211 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 211 (458)
..+|||+.++|+|.+.. ....+.++++..+||+|+++||+++... -...-..+.+.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~----t~Da~~sl~kA 126 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS----TQDAATSLMKA 126 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc----cHhHHHHHHHH
Confidence 46799999999998743 1234667777779999999999999854 12222335666
Q ss_pred HHHHh-hccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC--CCCCCceE-EEEcCe-----------------
Q 046207 212 VEKST-AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS--QSTSPLWY-SIKRAS----------------- 270 (458)
Q Consensus 212 ~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--~~~~~~~y-s~~~g~----------------- 270 (458)
+++.. .++||.+++||||-+..-. ......+... +|..-+ ......-| -..+|+
T Consensus 127 vaP~I~~~IPwA~~lGNHDdes~lt---r~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~s 201 (379)
T KOG1432|consen 127 VAPAIDRKIPWAAVLGNHDDESDLT---RLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKS 201 (379)
T ss_pred hhhHhhcCCCeEEEecccccccccC---HHHHHHHHhc--CCCccccCCCcccceeeeecccceEEEeccCCCcccccCc
Confidence 77654 4899999999999532110 0000111110 221100 00000011 111111
Q ss_pred -EEEEEecCCCc---------CC-CChHHHHHHHHHhccc---cCCCCC-eEEEEeccccccCC--CC---C---Ccc--
Q 046207 271 -AYIIVLSSYSA---------YG-KYTPQYAWLEKELPKV---NRAETP-WLIVLLHSPWYNSN--SY---H---YME-- 325 (458)
Q Consensus 271 -~~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-~~Iv~~H~P~~~~~--~~---~---~~~-- 325 (458)
..+.+||+..+ |+ ....|..||+..-.+- +..-.| .-+++.|.|+-... .. . ..+
T Consensus 202 v~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~ 281 (379)
T KOG1432|consen 202 VFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGV 281 (379)
T ss_pred eeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccc
Confidence 23456666433 11 1378999999887331 111122 46889999973211 11 0 001
Q ss_pred -chHHHHHHHHHHH-HcCccEEEeccccccccc
Q 046207 326 -GESMRVAFESWFV-QHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 326 -~~~~~~~l~~ll~-~~~Vdlvl~GH~H~y~r~ 356 (458)
.......+...|. +.+|+.|+|||+|...-.
T Consensus 282 ~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC 314 (379)
T KOG1432|consen 282 SASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFC 314 (379)
T ss_pred cccccccHHHHHHHhccCcceEEecccccccee
Confidence 1112234555555 789999999999986554
No 31
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.51 E-value=3.4e-13 Score=132.77 Aligned_cols=92 Identities=18% Similarity=0.261 Sum_probs=64.9
Q ss_pred CceEEEE-cCeE--EEEEecCCCcC-----------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCC-C----
Q 046207 261 PLWYSIK-RASA--YIIVLSSYSAY-----------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNS-Y---- 321 (458)
Q Consensus 261 ~~~ys~~-~g~~--~fi~Lds~~~~-----------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~-~---- 321 (458)
..+|+|+ .|++ ++|+||+.... ....+|++||+++|+.+.. +.+++|+++|+|+.+... .
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 99999987521 1248999999999998642 456788888888775221 1
Q ss_pred CC--------ccchHHHHHHHHHHHHc-CccEEEecccccc
Q 046207 322 HY--------MEGESMRVAFESWFVQH-KVDLVVAGHVHSY 353 (458)
Q Consensus 322 ~~--------~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y 353 (458)
.. ..+.....+|..+|.+| +|.++||||.|..
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 10 00111224799999999 6999999999964
No 32
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.50 E-value=5.2e-14 Score=102.43 Aligned_cols=62 Identities=35% Similarity=0.663 Sum_probs=41.4
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCceeeeeEE
Q 046207 378 SAPVYLTIGDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQ 444 (458)
Q Consensus 378 ~g~~yiv~G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 444 (458)
++|||||+|+||+.+ ..+..++|+|++++...|||++|+|.|+|+|.|+|+++.||+ +.|+|
T Consensus 1 kapVhiv~G~aG~~l---~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL---DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc---ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 378999999999943 456778899999999999999999999999999999999999 89997
No 33
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.43 E-value=1.8e-12 Score=109.07 Aligned_cols=117 Identities=25% Similarity=0.288 Sum_probs=83.4
Q ss_pred EEEecCCCCCCcHHHHH--HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 158 GIIGDLGQTYDSNQTFE--HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~--~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
+++||+|.......... ...+..++|+||++||+++... ...+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GNHD------ 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGP-----DPEEVLAAALALLLLLGIPVYVVPGNHD------ 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCC-----CchHHHHHHHHHhhcCCCCEEEeCCCce------
Confidence 36899998765444332 3333349999999999999775 2233333223333445789999999999
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPW 315 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~ 315 (458)
|+++|.|+
T Consensus 70 ------------------------------------------------------------------------i~~~H~~~ 77 (131)
T cd00838 70 ------------------------------------------------------------------------ILLTHGPP 77 (131)
T ss_pred ------------------------------------------------------------------------EEEeccCC
Confidence 89999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 316 YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+.............++.+..++.+.+++++|+||.|.+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 78 YDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 765543221122257788899999999999999999998865
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.34 E-value=9.9e-12 Score=108.69 Aligned_cols=154 Identities=21% Similarity=0.263 Sum_probs=90.2
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCC
Q 046207 155 YIFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 233 (458)
+||+++||+|...... +.++.+ + ++|+|+++||+++. ..+.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~-~~d~vi~~GDi~~~-----------~~~~~~~~~~----~~~~v~GNHD~~-- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--N-EPDFVIILGDIFDP-----------EEVLELLRDI----PVYVVRGNHDNW-- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--T-TESEEEEES-SCSH-----------HHHHHHHHHH----EEEEE--CCHST--
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--c-CCCEEEECCCchhH-----------HHHHHHHhcC----CEEEEeCCcccc--
Confidence 6999999999874332 233434 3 79999999999862 3344444443 999999999942
Q ss_pred CCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecc
Q 046207 234 PEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHS 313 (458)
Q Consensus 234 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 313 (458)
. +...... . . +.+.+.. .-....|+++|.
T Consensus 61 -------~---~~~~~~~---------~-~----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 61 -------A---FPNENDE---------E-Y----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp -------H---HHSEECT---------C-S----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred -------c---chhhhhc---------c-c----------------------------cccceee---eecCCeEEEECC
Confidence 0 1111000 0 0 1111111 112458899998
Q ss_pred ccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCCC
Q 046207 314 PWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIEG 393 (458)
Q Consensus 314 P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~~ 393 (458)
+.+... ...+.+..++...+++++|+||.|..+... .+++.++..|+-+....
T Consensus 90 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------------------~~~~~~~~~Gs~~~~~~ 142 (156)
T PF12850_consen 90 HPYDVQ--------WDPAELREILSRENVDLVLHGHTHRPQVFK-------------------IGGIHVINPGSIGGPRH 142 (156)
T ss_dssp TSSSST--------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE-------------------ETTEEEEEE-GSSS-SS
T ss_pred CCcccc--------cChhhhhhhhcccCCCEEEcCCcccceEEE-------------------ECCEEEEECCcCCCCCC
Confidence 776532 112356677889999999999999977643 34567888887665421
Q ss_pred CCCCCCCCCCCCcceeeCceeEEEEEEec
Q 046207 394 LADRYTEPQPSYSAYREASFGHAMLEIKN 422 (458)
Q Consensus 394 ~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~ 422 (458)
. . .-+|+.+++.+
T Consensus 143 -----~----------~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 143 -----G----------D-QSGYAILDIED 155 (156)
T ss_dssp -----S----------S-SEEEEEEEETT
T ss_pred -----C----------C-CCEEEEEEEec
Confidence 0 1 35899998854
No 35
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.32 E-value=2e-11 Score=104.32 Aligned_cols=117 Identities=20% Similarity=0.215 Sum_probs=75.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCC
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPE 235 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 235 (458)
||+++||+|.... .....++|+++++||+++.+. ...++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~-----~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~--- 64 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGT-----LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL--- 64 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC---
Confidence 5899999997643 223338999999999997653 334444555555442 223578999999420
Q ss_pred CCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEecccc
Q 046207 236 IGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPW 315 (458)
Q Consensus 236 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~ 315 (458)
. . ..+.|+++|.|+
T Consensus 65 -------~------------------------------------------------------~-----~~~~ilv~H~~p 78 (135)
T cd07379 65 -------D------------------------------------------------------P-----EDTDILVTHGPP 78 (135)
T ss_pred -------C------------------------------------------------------C-----CCCEEEEECCCC
Confidence 0 1 124688999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 316 YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
+............-.+.+.+++++.+++++|+||+|...
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 79 YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 765432111011113456677888999999999999874
No 36
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.25 E-value=7.8e-11 Score=112.43 Aligned_cols=83 Identities=17% Similarity=0.079 Sum_probs=60.5
Q ss_pred ECCCCCCCCCCeEEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 144 TTPPKVGPDVPYIFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 144 ~T~p~~~~~~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
.++..+....+++|+.++|+|..... .+.+.++... .||+|+++||+++.. .......+.+.++++.+..+
T Consensus 34 ~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~-~~DlivltGD~~~~~-----~~~~~~~~~~~L~~L~~~~g 107 (284)
T COG1408 34 LTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANE-LPDLIVLTGDYVDGD-----RPPGVAALALFLAKLKAPLG 107 (284)
T ss_pred ecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhc-CCCEEEEEeeeecCC-----CCCCHHHHHHHHHhhhccCC
Confidence 34444334578999999999987544 2233344444 789999999999862 23455667788888888899
Q ss_pred eEEccCCcccCC
Q 046207 221 WIWVPGNHELDY 232 (458)
Q Consensus 221 ~~~v~GNHD~~~ 232 (458)
+++++||||+..
T Consensus 108 v~av~GNHd~~~ 119 (284)
T COG1408 108 VFAVLGNHDYGV 119 (284)
T ss_pred EEEEeccccccc
Confidence 999999999853
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.22 E-value=2.6e-10 Score=105.29 Aligned_cols=64 Identities=23% Similarity=0.296 Sum_probs=42.8
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
+||+++||+|.... ......+. ..+||+||++||+++.. . .+.+.+..+ ..|+++++||||...
T Consensus 1 ~rIa~isDiHg~~~-~~~~~~l~-~~~pD~Vl~~GDi~~~~-------~---~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWD-LEDIKALH-LLQPDLVLFVGDFGNES-------V---QLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCch-HHHHHHHh-ccCCCEEEECCCCCcCh-------H---HHHHHHHhC--CCCeEEEcCCCcccc
Confidence 58999999996532 22233343 34899999999998531 1 222333332 479999999999754
No 38
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.20 E-value=5e-11 Score=106.50 Aligned_cols=111 Identities=19% Similarity=0.325 Sum_probs=71.6
Q ss_pred HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH---hhccceEEccCCcccCCCCCCCCcccCcccceeeccc
Q 046207 176 YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS---TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVP 252 (458)
Q Consensus 176 ~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 252 (458)
.+...+||+|+++||+++.+... ...+|....+.+.++ ...+|++.++||||++..... ....-.+||.
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~--~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~----~~~~~v~RF~-- 108 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIA--NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED----PIESKIRRFE-- 108 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCC--CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC----cCHHHHHHHH--
Confidence 33344999999999999998732 233454433333333 236899999999998532110 0011122331
Q ss_pred cCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHH
Q 046207 253 YRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVA 332 (458)
Q Consensus 253 ~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~ 332 (458)
.+| |++.|.|+..... ..
T Consensus 109 ---------~~F-------------------------------------------i~lsH~P~~~~~~----------~~ 126 (195)
T cd08166 109 ---------KYF-------------------------------------------IMLSHVPLLAEGG----------QA 126 (195)
T ss_pred ---------Hhh-------------------------------------------eeeeccccccccc----------HH
Confidence 011 8999999975322 16
Q ss_pred HHHHHHHcCccEEEeccccccccc
Q 046207 333 FESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 333 l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+..++.+++++++|+||.|.+...
T Consensus 127 ~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 127 LKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHHHHhcCceEEEEcCccceeeE
Confidence 677889999999999999987664
No 39
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.18 E-value=2e-10 Score=102.44 Aligned_cols=177 Identities=17% Similarity=0.196 Sum_probs=89.1
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHH--------------------------H
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWD--------------------------S 207 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~--------------------------~ 207 (458)
+-++++++|.+...+....+..+++..+||+|+++||+.-... ...+|. .
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ 80 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALDK 80 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHHH
Confidence 4589999999765444444444444449999999999986543 334444 3
Q ss_pred HHHHHHHHhhccceEEccCCcccCCCCCCCCcccC--cccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc-CCC
Q 046207 208 WGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPF--KPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA-YGK 284 (458)
Q Consensus 208 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~--~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~-~~~ 284 (458)
|++.+..+ .+|++++|||||-.. ..| .+|......|.-. .-...+.+.-|...++++..... ...
T Consensus 81 ff~~L~~~--~~p~~~vPG~~Dap~-------~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~ 148 (255)
T PF14582_consen 81 FFRILGEL--GVPVFVVPGNMDAPE-------RFFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQR 148 (255)
T ss_dssp HHHHHHCC---SEEEEE--TTS-SH-------HHHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-
T ss_pred HHHHHHhc--CCcEEEecCCCCchH-------HHHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCc
Confidence 44444332 689999999999410 000 0111111111100 00112334445577777765431 000
Q ss_pred --------ChHHHHHHHHHhccccCCCCCeEEEEecccc-ccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 285 --------YTPQYAWLEKELPKVNRAETPWLIVLLHSPW-YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 285 --------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
.....+|..+.|.+++ ..-+|+++|.|+ ...+..+. -.+.+.+++++++.+++||||.|.-.
T Consensus 149 ~~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 149 EEEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp BCSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 1234566677777752 234788899999 43332222 23578889999999999999999643
No 40
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.17 E-value=2.7e-10 Score=107.24 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCcHH---HHHHHHhC--CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc-cceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQ---TFEHYVSN--PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY-QAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~---~l~~~~~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 228 (458)
+|++++||+|.+..... .+.+.++. .++|+|+++||+++...-............+.++.+... +|++.++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47999999998754322 22222211 389999999999974210000112223455666666544 8999999999
Q ss_pred ccCCCCCCCCcccCcccceeec---cccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 229 ELDYAPEIGENVPFKPYTHRYH---VPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 229 D~~~~~~~~~~~~~~~~~~~f~---~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
|.... ..+.+... +| ....++.++.+++..-... +...+..++++.+.++..
T Consensus 81 D~~~~---------~~~~~~~g~~~l~---------~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~~------ 135 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMTLLP---------DPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRNP------ 135 (241)
T ss_pred chhhh---------HHHHHhCCCEEeC---------CcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhCH------
Confidence 96321 01111110 11 1223555666555544321 111234444444444431
Q ss_pred eEEEEeccccccCCC---------------CCCcc-chHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNS---------------YHYME-GESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~---------------~~~~~-~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
+...++|.+++.... ..... .....+.+.+++++++++++++||+|.-..
T Consensus 136 ~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 136 WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 122223333321100 00000 001124677888999999999999998654
No 41
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.17 E-value=4e-10 Score=100.99 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=103.2
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccc--cCCCCCCCchhHHHHHHHHHHHHh-hccceEEccCCccc
Q 046207 154 PYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLS--YADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVPGNHEL 230 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~--y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 230 (458)
.+|+++++|+|........+..+.+..++|+++++||++ +-+. ...-..-.. ++.+. ..+|+++++||-|-
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~-----~~~~~~~~~-~e~l~~~~~~v~avpGNcD~ 76 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGP-----KEVAEELNK-LEALKELGIPVLAVPGNCDP 76 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCc-----hHHHHhhhH-HHHHHhcCCeEEEEcCCCCh
Confidence 589999999998866666666666655899999999999 4332 111111000 34444 47999999999884
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc--C----CCChHH-HHHHHHHhccccCCC
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA--Y----GKYTPQ-YAWLEKELPKVNRAE 303 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~--~----~~~~~Q-~~WL~~~L~~~~~~~ 303 (458)
.. ........... .. + ...+.+++.|+++.-... + ...+++ +.-|++-+++++.
T Consensus 77 ~~---------v~~~l~~~~~~-----v~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-- 137 (226)
T COG2129 77 PE---------VIDVLKNAGVN-----VH-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-- 137 (226)
T ss_pred HH---------HHHHHHhcccc-----cc-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC--
Confidence 21 00111111100 00 1 456677777777432211 1 111222 2334444444321
Q ss_pred CCeEEEEeccccccCCCCCCcc-chHHHHHHHHHHHHcCccEEEecccccc
Q 046207 304 TPWLIVLLHSPWYNSNSYHYME-GESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 304 ~~~~Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
.-.|+++|+|++......... ...-.+.+..++++.++.+.+|||.|-+
T Consensus 138 -~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 138 -PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred -cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 112999999999875542111 1233568889999999999999999984
No 42
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.16 E-value=1.7e-10 Score=102.36 Aligned_cols=58 Identities=28% Similarity=0.500 Sum_probs=38.5
Q ss_pred HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-------hccceEEccCCcccC
Q 046207 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-------AYQAWIWVPGNHELD 231 (458)
Q Consensus 172 ~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~ 231 (458)
.+..+++..+||+|+++||+++..... ....|....+.+..+. ..+|++.++||||+.
T Consensus 36 ~~~~~i~~~~pd~vi~lGDl~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 36 AFKTALQRLKPDVVLFLGDLFDGGRIA--DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHhcCCCEEEEeccccCCcEeC--CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 344555556999999999999876411 1234554443333332 268999999999974
No 43
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=99.16 E-value=4.6e-10 Score=113.37 Aligned_cols=177 Identities=16% Similarity=0.175 Sum_probs=109.1
Q ss_pred HHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHH---HHHHHHHHhhccceEEccCCcccCCCCCCC----Ccc--
Q 046207 171 QTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDS---WGRFVEKSTAYQAWIWVPGNHELDYAPEIG----ENV-- 240 (458)
Q Consensus 171 ~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~---~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----~~~-- 240 (458)
.+|+++.+.. ++|+|+++||++-.+.+....+...+. ..+.+.....++|+|+++||||........ ...
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~ 278 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHS 278 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhh
Confidence 3566676665 499999999999887644333333333 334455556689999999999984322111 000
Q ss_pred ---cCccc---ceeeccccCC-CCCCCCceEEEE-cCeEEEEEecCCCcCC----------CChHHHHHHHHHhccccCC
Q 046207 241 ---PFKPY---THRYHVPYRA-SQSTSPLWYSIK-RASAYIIVLSSYSAYG----------KYTPQYAWLEKELPKVNRA 302 (458)
Q Consensus 241 ---~~~~~---~~~f~~P~~~-~~~~~~~~ys~~-~g~~~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~ 302 (458)
-|... ...| +|... .....+.+|... +++.++|+||+..-+. ....|++|+..+|.+++..
T Consensus 279 ~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 279 QLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 00111 1122 44322 222345677654 4889999999975422 2377899999999997643
Q ss_pred CCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcC--ccEEEeccccccc
Q 046207 303 ETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHK--VDLVVAGHVHSYE 354 (458)
Q Consensus 303 ~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--Vdlvl~GH~H~y~ 354 (458)
..-+=+++|.|+-.... .+.....+..++.++. +...|.||.|.-+
T Consensus 358 -GekVhil~HIPpG~~~c-----~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 358 -GEKVHILGHIPPGDGVC-----LEGWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred -CCEEEEEEeeCCCCcch-----hhhhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 44578889999854211 1223345556666663 5567999999754
No 44
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.14 E-value=4.8e-10 Score=98.13 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=40.5
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++.. ++|.|+++||+++... ... +....|++.|.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~----~~~-----------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGP----LNE-----------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCccccccc----cch-----------hhcCCcEEEEeCCCCC
Confidence 589999999663 4444444432 3999999999998654 111 2335789999999995
No 45
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.12 E-value=6.7e-10 Score=103.73 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=102.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHH---hCCCCcEEEEcCccccCCCCC-----------------CCc----hhHHHHH--H
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYV---SNPKGQAVLFVGDLSYADDHP-----------------QHD----NRRWDSW--G 209 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~-----------------~~~----~~~~~~~--~ 209 (458)
||++.||.+...........+. ...+||++|++||.+|++... ... ...+..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5899999987766555555554 233999999999999998621 011 2222222 2
Q ss_pred HHHHHHhhccceEEccCCcccCCCCCCCC-------------cccCcccceeeccccCCCC--CCCCceEEEEcCeE-EE
Q 046207 210 RFVEKSTAYQAWIWVPGNHELDYAPEIGE-------------NVPFKPYTHRYHVPYRASQ--STSPLWYSIKRASA-YI 273 (458)
Q Consensus 210 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-------------~~~~~~~~~~f~~P~~~~~--~~~~~~ys~~~g~~-~f 273 (458)
..++.+.+.+|++.++.+||+..+..... ......|......+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 34566777899999999999964432210 0111233333332222221 23568999999996 99
Q ss_pred EEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCc--cEEEecccc
Q 046207 274 IVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKV--DLVVAGHVH 351 (458)
Q Consensus 274 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~V--dlvl~GH~H 351 (458)
++||+.... ..| ......|+.+..++.+.++ -++|+|++|
T Consensus 161 ~~lD~R~~R------------------------------------d~W--~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR------------------------------------DSW--DGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc------------------------------------ccc--cccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 122 2235567777777655543 388999999
Q ss_pred cccccc
Q 046207 352 SYERTN 357 (458)
Q Consensus 352 ~y~r~~ 357 (458)
..+...
T Consensus 203 ~~~~~~ 208 (228)
T cd07389 203 LAEASD 208 (228)
T ss_pred HHHHhh
Confidence 766543
No 46
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.09 E-value=4.2e-10 Score=98.36 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=36.0
Q ss_pred HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh---ccceEEccCCccc
Q 046207 175 HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA---YQAWIWVPGNHEL 230 (458)
Q Consensus 175 ~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~ 230 (458)
++++..+||+|+++||+++..... ....|..+...+..+.. ..|++.++||||.
T Consensus 32 ~~i~~~~pd~vv~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 32 TSLWLLQPDVVFVLGDLFDEGKWS--TDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDI 88 (156)
T ss_pred HHHHhcCCCEEEECCCCCCCCccC--CHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCc
Confidence 444455999999999999865411 23445544433333322 4799999999996
No 47
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.07 E-value=3.4e-08 Score=88.25 Aligned_cols=167 Identities=18% Similarity=0.205 Sum_probs=96.2
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 156 IFGIIGDLGQTYDS---NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 156 ~f~~~gD~~~~~~~---~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
+++++||+|.+... ...+.++++..++|.|+|+||+++. .. .+.++.+ ..|++.|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~--------~~----~~~l~~~--~~~~~~V~GN~D~~~ 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK--------ET----YDYLKTI--APDVHIVRGDFDENL 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH--------HH----HHHHHhh--CCceEEEECCCCccc
Confidence 47899999955432 2234555554479999999999752 12 2233333 247999999999410
Q ss_pred CCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEEEec
Q 046207 233 APEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIVLLH 312 (458)
Q Consensus 233 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H 312 (458)
.+|. ...++++ .++|.++|
T Consensus 67 -----------------~lp~---------~~~~~~~-----------------------------------g~~i~l~H 85 (178)
T cd07394 67 -----------------NYPE---------TKVITVG-----------------------------------QFKIGLIH 85 (178)
T ss_pred -----------------cCCC---------cEEEEEC-----------------------------------CEEEEEEE
Confidence 1221 1112222 13566666
Q ss_pred cccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCCCCC
Q 046207 313 SPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGGNIE 392 (458)
Q Consensus 313 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG~~~ 392 (458)
--.+.... ..+.+..++++.++|++++||+|...... .++..++..|+.|.+.
T Consensus 86 G~~~~~~~--------~~~~~~~~~~~~~~dvii~GHTH~p~~~~-------------------~~g~~viNPGSv~~~~ 138 (178)
T cd07394 86 GHQVVPWG--------DPDSLAALQRQLDVDILISGHTHKFEAFE-------------------HEGKFFINPGSATGAF 138 (178)
T ss_pred CCcCCCCC--------CHHHHHHHHHhcCCCEEEECCCCcceEEE-------------------ECCEEEEECCCCCCCC
Confidence 43221100 11244556677889999999999754321 2456778888877543
Q ss_pred CCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEEEEEcCCCc
Q 046207 393 GLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFTWHRNHDNE 437 (458)
Q Consensus 393 ~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~~~~~~dg~ 437 (458)
.. .. . .....|+.|++.++ .+.+++++-.+++
T Consensus 139 ~~-~~---~--------~~~~syail~~~~~-~~~~~~~~l~~~~ 170 (178)
T cd07394 139 SP-LD---P--------NVIPSFVLMDIQGS-KVVTYVYQLIDGE 170 (178)
T ss_pred CC-CC---C--------CCCCeEEEEEecCC-eEEEEEEEEECCc
Confidence 21 00 0 01136888998554 4677877654554
No 48
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.02 E-value=3.8e-09 Score=92.77 Aligned_cols=62 Identities=18% Similarity=0.071 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||+|......+.+.++.+.. ++|.|+++||++. . ...+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~--------~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS--------P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC--------H----HHHHHHHHh--CCceEEEccCCCc
Confidence 58999999997654444444555554 8999999999982 1 122333332 3589999999994
No 49
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.97 E-value=5.6e-08 Score=97.28 Aligned_cols=44 Identities=23% Similarity=0.206 Sum_probs=31.7
Q ss_pred CCeEEEEEecCCCCCC---------cHHHHHHHH---hCCCCcEEEEcCccccCCC
Q 046207 153 VPYIFGIIGDLGQTYD---------SNQTFEHYV---SNPKGQAVLFVGDLSYADD 196 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~---------~~~~l~~~~---~~~~pd~vl~~GDl~y~~~ 196 (458)
..+||++++|+|.+.. ...++++++ ...++|+||++||+.+...
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 4699999999998732 123334332 2339999999999998865
No 50
>PRK09453 phosphodiesterase; Provisional
Probab=98.93 E-value=3.4e-08 Score=88.85 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchh--HHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNR--RWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||+|......+.+.+.++..++|.|+++||+++.+.. ..... ..+...+.++.+ ..+++.+.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPR-NPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcC-CCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 5899999999653322333333333489999999999975431 00000 112233333332 3589999999995
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.93 E-value=1.9e-08 Score=94.03 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=46.6
Q ss_pred EEEecCCCCCCcH----HHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccceEEccCCcccC
Q 046207 158 GIIGDLGQTYDSN----QTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAWIWVPGNHELD 231 (458)
Q Consensus 158 ~~~gD~~~~~~~~----~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 231 (458)
+++||+|.+.... ..++.+.+. .+||+|+++||+++.-.-........+.+.+.++.+.. ..|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 6899999875422 233444432 17999999999997421000011222445556666654 48999999999963
No 52
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.92 E-value=5.1e-09 Score=93.50 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=37.6
Q ss_pred HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHH-HHHHHHHh-------------------hccceEEccCCccc
Q 046207 171 QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSW-GRFVEKST-------------------AYQAWIWVPGNHEL 230 (458)
Q Consensus 171 ~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~l~-------------------~~~P~~~v~GNHD~ 230 (458)
.....+....+||.|+++|||++.. +. .+++|... .++.+.+. ..+|++.++||||+
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~-w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQ-WI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCC-cc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 3445555556999999999999764 33 23445432 22222221 13799999999998
Q ss_pred CC
Q 046207 231 DY 232 (458)
Q Consensus 231 ~~ 232 (458)
.+
T Consensus 111 G~ 112 (193)
T cd08164 111 GY 112 (193)
T ss_pred CC
Confidence 54
No 53
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.91 E-value=7.5e-09 Score=87.51 Aligned_cols=50 Identities=20% Similarity=0.145 Sum_probs=33.3
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+|+++|+|++....... ....-.+.+.+++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 57888988864332110 011224577788889999999999999765543
No 54
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.87 E-value=1.1e-08 Score=97.02 Aligned_cols=174 Identities=13% Similarity=0.094 Sum_probs=88.6
Q ss_pred eEEEEEecCCCCC------CcHH----HHHHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEE
Q 046207 155 YIFGIIGDLGQTY------DSNQ----TFEHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~------~~~~----~l~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 223 (458)
++|+.++|+|... .... .++++.++ ++| +++.+||++....... ........+.+..+ -.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~-~~~~l~v~~GD~~~~~~~~~--~~~~~~~~~~l~~~---g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE-NENTLLLDAGDNFDGSPPST--ATKGEANIELMNAL---GYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc-CCCeEEEeCCccCCCccchh--ccCCcHHHHHHHhc---CCCEE
Confidence 5899999999543 2233 34444444 677 7899999997655211 01111223333332 34567
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccc-------cCC---CCCCCCceEEEEcCe--EEEEEecCCCcCC--------
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVP-------YRA---SQSTSPLWYSIKRAS--AYIIVLSSYSAYG-------- 283 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P-------~~~---~~~~~~~~ys~~~g~--~~fi~Lds~~~~~-------- 283 (458)
++||||+..... .+.........| ..+ .......|..++.++ +-|+++.+.....
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999853221 111111111111 000 001112355667776 4556665432200
Q ss_pred --CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccccc
Q 046207 284 --KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYER 355 (458)
Q Consensus 284 --~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~r 355 (458)
......+.+++..+. .+.+.+.+|++.|.+... . .. +.++ .+||++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~--------~----~~---la~~~~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD--------D----EE---LAEEVPGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc--------h----HH---HHhcCCCccEEEcCCcCcccC
Confidence 001222333331222 225678899999987642 0 11 2222 5899999999998754
No 55
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.86 E-value=4.3e-08 Score=84.00 Aligned_cols=159 Identities=19% Similarity=0.200 Sum_probs=82.5
Q ss_pred HHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCccccee
Q 046207 170 NQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHR 248 (458)
Q Consensus 170 ~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 248 (458)
++.-++..... .-|.|++.||++.+.... +-..=++++..+- ---+.+.||||+.+. +.. ...+.
T Consensus 31 ekI~k~W~~~v~~eDiVllpGDiSWaM~l~-----ea~~Dl~~i~~LP--G~K~m~rGNHDYWw~-s~s------kl~n~ 96 (230)
T COG1768 31 EKIKKHWRSKVSPEDIVLLPGDISWAMRLE-----EAEEDLRFIGDLP--GTKYMIRGNHDYWWS-SIS------KLNNA 96 (230)
T ss_pred HHHHHHHHhcCChhhEEEecccchhheech-----hhhhhhhhhhcCC--CcEEEEecCCccccc-hHH------HHHhh
Confidence 33444444333 458999999999886521 1111133444332 224679999998653 111 11111
Q ss_pred eccccCCCCCCCCceEEEEcCeEEEEEe---cCC-CcCCCChHH--------HHHHHHHhccccCCCCCeEEEEeccccc
Q 046207 249 YHVPYRASQSTSPLWYSIKRASAYIIVL---SSY-SAYGKYTPQ--------YAWLEKELPKVNRAETPWLIVLLHSPWY 316 (458)
Q Consensus 249 f~~P~~~~~~~~~~~ys~~~g~~~fi~L---ds~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~~~Iv~~H~P~~ 316 (458)
+|..- --..-.|.++++.+++. |+. .++....+| ..-|+..+.++-++.....||++|.|++
T Consensus 97 --lp~~l----~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~ 170 (230)
T COG1768 97 --LPPIL----FYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPF 170 (230)
T ss_pred --cCchH----hhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCC
Confidence 11000 00000133344333332 221 112122222 2333332222223455568999999999
Q ss_pred cCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 317 NSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+...... .+.+++++++|+.++.||.|--.|-
T Consensus 171 s~~~t~~--------~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 171 SDDGTPG--------PFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred CCCCCCc--------chHHHHhhcceeeEEeeeccCCCCC
Confidence 7654322 4567888999999999999998774
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.80 E-value=9.3e-08 Score=92.02 Aligned_cols=184 Identities=13% Similarity=0.064 Sum_probs=90.7
Q ss_pred eEEEEEecCCCCCC-------------cHHH----HHHHHhCCCCcEEEE-cCccccCCCCCCCc----hhHHHHHHHHH
Q 046207 155 YIFGIIGDLGQTYD-------------SNQT----FEHYVSNPKGQAVLF-VGDLSYADDHPQHD----NRRWDSWGRFV 212 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------------~~~~----l~~~~~~~~pd~vl~-~GDl~y~~~~~~~~----~~~~~~~~~~~ 212 (458)
++|+.++|+|.... .... ++++.+. +++.+++ +||++......... ........+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE-NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc-CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHH
Confidence 57888999885421 1122 3333333 6787776 99998754310000 00011223344
Q ss_pred HHHhhccceEEccCCcccCCCCCCCCcccCcccceeecccc-------CC-CCCCCCceEEEEcC-eEE--EEEecCCCc
Q 046207 213 EKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPY-------RA-SQSTSPLWYSIKRA-SAY--IIVLSSYSA 281 (458)
Q Consensus 213 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~~-~~~~~~~~ys~~~g-~~~--fi~Lds~~~ 281 (458)
+.+ -+-+.++||||+..... .+.........|. .. .......|..++.+ +++ ||++-+...
T Consensus 80 n~~---g~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~ 151 (277)
T cd07410 80 NAL---GYDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQI 151 (277)
T ss_pred Hhc---CCCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccc
Confidence 433 23467889999864211 1111111111110 00 00112346667788 754 455543221
Q ss_pred --C-----------CCChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEe
Q 046207 282 --Y-----------GKYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVA 347 (458)
Q Consensus 282 --~-----------~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~ 347 (458)
+ ....+..++..++|++ .+.+.+|+++|.+....... ....+.....+.++ .+||++|+
T Consensus 152 ~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~----~~~~~~~~~~la~~~~~vD~Ilg 224 (277)
T cd07410 152 PNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEE----SLTGENAAYELAEEVPGIDAILT 224 (277)
T ss_pred ccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccc----ccCCccHHHHHHhcCCCCcEEEe
Confidence 0 0112234444455554 56788999999987543210 01111222344444 58999999
Q ss_pred ccccccc
Q 046207 348 GHVHSYE 354 (458)
Q Consensus 348 GH~H~y~ 354 (458)
||.|...
T Consensus 225 GHsH~~~ 231 (277)
T cd07410 225 GHQHRRF 231 (277)
T ss_pred CCCcccc
Confidence 9999754
No 57
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.78 E-value=2.7e-08 Score=92.05 Aligned_cols=181 Identities=12% Similarity=0.067 Sum_probs=87.7
Q ss_pred EEEecCCCCCCcHH---HHHHHHhC---CCCcEEEEcCccccCCCCCCCc-hhHHHH-HHHHHHHHhhccceEEccCCcc
Q 046207 158 GIIGDLGQTYDSNQ---TFEHYVSN---PKGQAVLFVGDLSYADDHPQHD-NRRWDS-WGRFVEKSTAYQAWIWVPGNHE 229 (458)
Q Consensus 158 ~~~gD~~~~~~~~~---~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~-~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 229 (458)
+++||+|.+..... .+..+.+. .++|.++++||+++.-...... ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 47999998754322 22333222 3899999999999752211101 111111 2344444556789999999999
Q ss_pred cCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCcCCCChHHHHHHHHHhccccCCCCCeEEE
Q 046207 230 LDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSAYGKYTPQYAWLEKELPKVNRAETPWLIV 309 (458)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv 309 (458)
.... . .+........ .......+.+++.+++++-.... ........|+...+.... ..+.++
T Consensus 81 ~~~~-------~--~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~~~~~~---~~~~~~ 142 (217)
T cd07398 81 FLLG-------D--FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRLGRNPY---DQLLFL 142 (217)
T ss_pred HHHH-------h--HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHHhCcHH---HHHHHh
Confidence 7421 0 0100000000 01112145667777777665432 233344444444332210 000000
Q ss_pred Eecccc---------cc----CCCCCC--ccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 310 LLHSPW---------YN----SNSYHY--MEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 310 ~~H~P~---------~~----~~~~~~--~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+... .. ...... .......+.+..++.+++++++++||+|.....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 143 NRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred cchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000 00 000000 011233456667778899999999999987553
No 58
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.74 E-value=9.7e-08 Score=90.75 Aligned_cols=174 Identities=16% Similarity=0.182 Sum_probs=88.3
Q ss_pred eEEEEEecCCCCCC-------cHHHH----HHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 155 YIFGIIGDLGQTYD-------SNQTF----EHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------~~~~l----~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
++|+.+.|+|.-.. ....+ +++.+. +++ ++|.+||++...... ...+.+...+.++.+ ..-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~--~~~~g~~~~~~l~~l---~~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-NPNTLVLFSGDVLSPSLLS--TATKGKQMVPVLNAL---GVDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-CCCEEEEECCCccCCccch--hhcCCccHHHHHHhc---CCcE
Confidence 47888888873111 12333 333334 677 999999998654311 001112233344433 2336
Q ss_pred EccCCcccCCCCCCCCcccCcccceeeccc---------cC-CCCCCCCceEEEEcCeE--EEEEecCCCcC------CC
Q 046207 223 WVPGNHELDYAPEIGENVPFKPYTHRYHVP---------YR-ASQSTSPLWYSIKRASA--YIIVLSSYSAY------GK 284 (458)
Q Consensus 223 ~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P---------~~-~~~~~~~~~ys~~~g~~--~fi~Lds~~~~------~~ 284 (458)
.++||||+..... .+........+| .. .....-+.|..++.+++ -||++.+.... ..
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 6899999854211 111111111111 00 00001245677788874 55666554211 00
Q ss_pred ---ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 285 ---YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 285 ---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
...-.+.+++.+++..+.+.+.+|++.|.+... .. .+.++ .+||++|+||.|..+
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 122233344434333335678899999987521 11 23333 479999999999865
No 59
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.62 E-value=4.4e-07 Score=85.84 Aligned_cols=181 Identities=18% Similarity=0.164 Sum_probs=94.8
Q ss_pred EEEEecCCCCCCc-HHHHHHHHhC--CCCcEEEEcCccccCCCCCCCch---------hHHHHHHHHHHHHh-hccceEE
Q 046207 157 FGIIGDLGQTYDS-NQTFEHYVSN--PKGQAVLFVGDLSYADDHPQHDN---------RRWDSWGRFVEKST-AYQAWIW 223 (458)
Q Consensus 157 f~~~gD~~~~~~~-~~~l~~~~~~--~~pd~vl~~GDl~y~~~~~~~~~---------~~~~~~~~~~~~l~-~~~P~~~ 223 (458)
|++.||.|..... ...+..+.+. .++|++|++||+..... ..+. ..+..|.+.++... ..+|+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--EADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--cchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5899999864221 1123333322 27999999999954322 1111 12233434443332 3577899
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCce-----EEEEcCeEEEEEecCCCc---CCC--------ChH
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLW-----YSIKRASAYIIVLSSYSA---YGK--------YTP 287 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~-----ys~~~g~~~fi~Lds~~~---~~~--------~~~ 287 (458)
|.||||-.. . +. .++..+ ....+.+ ..+++++++|..|..... +.. ...
T Consensus 79 i~GNHE~~~--------~---l~---~l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~ 143 (262)
T cd00844 79 IGGNHEASN--------Y---LW---ELPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSED 143 (262)
T ss_pred ECCCCCCHH--------H---HH---hhcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHH
Confidence 999999410 0 10 011100 0011222 235568899998876321 111 122
Q ss_pred HHHHHH-------HHhccccCCCCCeEEEEeccccccCCCCCCcc---------------chHHHHHHHHHHHHcCccEE
Q 046207 288 QYAWLE-------KELPKVNRAETPWLIVLLHSPWYNSNSYHYME---------------GESMRVAFESWFVQHKVDLV 345 (458)
Q Consensus 288 Q~~WL~-------~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll~~~~Vdlv 345 (458)
++..+. +.|... +.+--|+++|.|+..-....... ...-...+..++++.++..+
T Consensus 144 ~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 144 TKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 332211 112221 11236999999997643211100 01123467789999999999
Q ss_pred Eeccccc-ccccc
Q 046207 346 VAGHVHS-YERTN 357 (458)
Q Consensus 346 l~GH~H~-y~r~~ 357 (458)
|+||.|. |++..
T Consensus 221 f~gH~H~~f~~~~ 233 (262)
T cd00844 221 FSAHLHVKFAALV 233 (262)
T ss_pred EEecCCcccceec
Confidence 9999998 56554
No 60
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.62 E-value=1.9e-07 Score=94.45 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=50.7
Q ss_pred eEEEEEecCCCCCC----------cHH----HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-cc
Q 046207 155 YIFGIIGDLGQTYD----------SNQ----TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~----------~~~----~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~ 219 (458)
+||++++|+|.+.. ... .+..+.+. ++||||++||+.+....+ ...-..+.+.++.+.. ++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~-~vD~vliAGDlFd~~~Ps---~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE-KVDFVLIAGDLFDTNNPS---PRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc-cCCEEEEccccccCCCCC---HHHHHHHHHHHHHhccCCC
Confidence 58999999999821 112 23334444 999999999999986522 1222345566666643 79
Q ss_pred ceEEccCCcccC
Q 046207 220 AWIWVPGNHELD 231 (458)
Q Consensus 220 P~~~v~GNHD~~ 231 (458)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999964
No 61
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.61 E-value=3e-07 Score=90.27 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=75.2
Q ss_pred CCCeEEEEEecCCCCCCc-----HH-------------HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS-----NQ-------------TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVE 213 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~-----~~-------------~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 213 (458)
+..+|+++++|.|.-.+. .. .........+||.++++||+.+++.+.+ +++|..-.+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~--~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG--DEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC--hHHHHHHHHHHH
Confidence 578999999999865421 11 1111222239999999999999876443 456655433345
Q ss_pred HHh---hccceEEccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCCCc
Q 046207 214 KST---AYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSYSA 281 (458)
Q Consensus 214 ~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~~~ 281 (458)
++. ..+|.+.++||||+++.... ...+..||.- ..++....|+.|+..|+++|++..
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~------~fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFES------VFGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHH------hhcchhhhhccCCceeEEeeehhh
Confidence 443 36899999999999754321 1223334420 012356678999999999998754
No 62
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.55 E-value=8.7e-07 Score=84.25 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=88.7
Q ss_pred eEEEEEecCCCCCC-------cHHHH----HHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEE
Q 046207 155 YIFGIIGDLGQTYD-------SNQTF----EHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~~-------~~~~l----~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 223 (458)
++|+.++|+|.... ....+ +++.+. +.+++|.+||++...... .........+.+..+ ..- +.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~ln~~--g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPIS--DLDKGETIIKIMNAV--GYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhh--hhcCCcHHHHHHHhc--CCc-EE
Confidence 47899999996421 12233 333333 578999999998753310 011111222333322 233 45
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCC-------CC-CCCceEEEEcC-e--EEEEEecCCCc-C---CC---C
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS-------QS-TSPLWYSIKRA-S--AYIIVLSSYSA-Y---GK---Y 285 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~-~~~~~ys~~~g-~--~~fi~Lds~~~-~---~~---~ 285 (458)
++||||++... ..+......+.+|.-.. +. .-..|.-++.+ + +-||++-+... . .. +
T Consensus 75 ~~GNHefd~G~-----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGL-----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCH-----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 78999986421 11122222222221100 00 01224455666 5 56676665321 0 00 0
Q ss_pred ---hHHHHHHHHH-hccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccccc
Q 046207 286 ---TPQYAWLEKE-LPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYER 355 (458)
Q Consensus 286 ---~~Q~~WL~~~-L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~r 355 (458)
..-.+-+++. ....++.+.+.+|++.|.+....... . ... .+.++ .+||++|.||.|....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~----~--~~~---~la~~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP----W--TST---ELAANVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC----c--cHH---HHHHhCCCceEEEeCCCccccc
Confidence 1112223333 22222256888999999887543211 0 011 22223 4799999999998654
No 63
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.54 E-value=3.6e-06 Score=74.26 Aligned_cols=63 Identities=17% Similarity=0.018 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++|+++||+|..........++....++|+|||+||.+.... ... +... -..++++|.||.|.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~---l~~~-----~~~~i~~V~GN~D~ 64 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDA---LEGG-----LAAKLIAVRGNCDG 64 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHH---hhcc-----cccceEEEEccCCC
Confidence 689999999987532222333333339999999999998654 111 1111 13689999999996
No 64
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.54 E-value=1.2e-06 Score=84.71 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=36.4
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH--cCccEEEecccccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ--HKVDLVVAGHVHSYER 355 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~Vdlvl~GH~H~y~r 355 (458)
+-+++.+++++..+.+.+|++.|........... .+.......+++.+ .++|++|+||.|....
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 3444444444335688899999988653222110 01111122334444 3799999999998754
No 65
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.53 E-value=2.7e-06 Score=81.27 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=73.0
Q ss_pred CCcEE-EEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-----
Q 046207 181 KGQAV-LFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR----- 254 (458)
Q Consensus 181 ~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----- 254 (458)
++|.+ +.+||++...... .........+.++. .++.++.||||+..... .+....+.+.+|.-
T Consensus 50 ~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~l~~----~g~da~~GNHefd~g~~-----~l~~~~~~~~~~~l~aN~~ 118 (264)
T cd07411 50 NPNTLLLDGGDTWQGSGEA--LYTRGQAMVDALNA----LGVDAMVGHWEFTYGPE-----RVRELFGRLNWPFLAANVY 118 (264)
T ss_pred CCCeEEEeCCCccCCChHH--hhcCChhHHHHHHh----hCCeEEecccccccCHH-----HHHHHHhhCCCCEEEEEEE
Confidence 67876 5799999765310 00111222333333 45555449999864211 11111112222210
Q ss_pred --CCC-CCCCceEEEEcCe--EEEEEecCCCcCC-------C---ChHHHHHHHHHhcccc-CCCCCeEEEEeccccccC
Q 046207 255 --ASQ-STSPLWYSIKRAS--AYIIVLSSYSAYG-------K---YTPQYAWLEKELPKVN-RAETPWLIVLLHSPWYNS 318 (458)
Q Consensus 255 --~~~-~~~~~~ys~~~g~--~~fi~Lds~~~~~-------~---~~~Q~~WL~~~L~~~~-~~~~~~~Iv~~H~P~~~~ 318 (458)
..+ ..-..|..++.++ +-||++.+..... . .....+.+++.+.+.. +.+.+.+|++.|.+...
T Consensus 119 ~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~- 197 (264)
T cd07411 119 DDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV- 197 (264)
T ss_pred eCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh-
Confidence 000 0112355567776 5567776532100 0 1223444544433321 25678899999987531
Q ss_pred CCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 319 NSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 319 ~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.. .+.++ .+||++|+||.|...
T Consensus 198 -------~~-------~la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 198 -------DV-------ELAERVPGIDVILSGHTHERT 220 (264)
T ss_pred -------hH-------HHHhcCCCCcEEEeCcccccc
Confidence 11 12233 479999999999753
No 66
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.42 E-value=1.4e-05 Score=76.71 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=92.2
Q ss_pred CCeEEEEEecCCCCCCc--------------HHHHHHHH---hCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 153 VPYIFGIIGDLGQTYDS--------------NQTFEHYV---SNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 153 ~~~~f~~~gD~~~~~~~--------------~~~l~~~~---~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
..++|+..+|+|..... ...++++. +..+++ ++|..||.+....+.......+....++++.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 46999999999954210 11223222 222455 6778999997654221111123333444444
Q ss_pred Hhhccce-EEccCCcccCCCCCCCCcccCcccceeecccc--------CCC-C--CCCCceEEEEcC-e--EEEEEecCC
Q 046207 215 STAYQAW-IWVPGNHELDYAPEIGENVPFKPYTHRYHVPY--------RAS-Q--STSPLWYSIKRA-S--AYIIVLSSY 279 (458)
Q Consensus 215 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~--------~~~-~--~~~~~~ys~~~g-~--~~fi~Lds~ 279 (458)
+ ++ ++++||||++.... + ...+..+......|. .+. . .....|..++.+ + +-+|++-+.
T Consensus 84 m----gyDa~tlGNHEFd~g~~-~-l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~ 157 (282)
T cd07407 84 M----PYDLLTIGNHELYNYEV-A-DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFD 157 (282)
T ss_pred c----CCcEEeecccccCcccc-H-HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecc
Confidence 3 33 67999999953211 0 000000111111110 000 0 011235556665 5 456666543
Q ss_pred Cc-------CCCC--hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-Ccc-EEEec
Q 046207 280 SA-------YGKY--TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVD-LVVAG 348 (458)
Q Consensus 280 ~~-------~~~~--~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vd-lvl~G 348 (458)
.. +... ..+.+|+.+.|++ .+.+.+|++.|....... ...+....+.++. ++| ++|.|
T Consensus 158 ~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~G 226 (282)
T cd07407 158 FKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGG 226 (282)
T ss_pred cccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeC
Confidence 21 1111 2233488777874 467889999998874321 1111122334444 567 79999
Q ss_pred ccccc
Q 046207 349 HVHSY 353 (458)
Q Consensus 349 H~H~y 353 (458)
|+|..
T Consensus 227 HsH~~ 231 (282)
T cd07407 227 HSHVR 231 (282)
T ss_pred Ccccc
Confidence 99975
No 67
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.41 E-value=1.8e-05 Score=76.31 Aligned_cols=189 Identities=14% Similarity=0.081 Sum_probs=86.7
Q ss_pred eEEEEEecCCCCCCc-------H----HHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhcc
Q 046207 155 YIFGIIGDLGQTYDS-------N----QTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQ 219 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-------~----~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~ 219 (458)
++|+..+|+|..... . ..++++.++ ...-++|.+||++..... + ...+.....+.++.+ ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~-~~~~g~~~~~~~n~~--g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-S-DLQDAEPDFRGMNLV--GY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-H-HhcCcchHHHHHHhh--CC
Confidence 478899999864211 1 223333321 134589999998854321 0 001111122333333 12
Q ss_pred ceEEccCCcccCCCCCCCCcccCcccce--eeccccC-----CCCCCCCceEEEEcCeEE--EEEecCCCc-C--C----
Q 046207 220 AWIWVPGNHELDYAPEIGENVPFKPYTH--RYHVPYR-----ASQSTSPLWYSIKRASAY--IIVLSSYSA-Y--G---- 283 (458)
Q Consensus 220 P~~~v~GNHD~~~~~~~~~~~~~~~~~~--~f~~P~~-----~~~~~~~~~ys~~~g~~~--fi~Lds~~~-~--~---- 283 (458)
=..++||||+++... .+..... .|++... .....-..|..++.++++ ||++-+... . .
T Consensus 77 -Da~~~GNHEfD~G~~-----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~ 150 (285)
T cd07405 77 -DAMAVGNHEFDNPLE-----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYF 150 (285)
T ss_pred -cEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCc
Confidence 245789999865321 1111111 1111100 000111235566777754 555544221 0 0
Q ss_pred CC---hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 284 KY---TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 284 ~~---~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+ ....+=+++.+++.+..+.+.+|++.|........ .. ........+.+.+...++|++|.||.|....
T Consensus 151 ~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~-~~-~~~~~~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 151 EGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGE-HG-SNAPGDVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred CCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcc-cc-ccCchHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 00 11222222222222224678899999998753221 10 0101111222222235899999999998653
No 68
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.40 E-value=6.4e-06 Score=77.55 Aligned_cols=170 Identities=15% Similarity=0.142 Sum_probs=88.3
Q ss_pred EEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 156 IFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
||+++||. .+.... ..+.++.++.++|+++..||++-.+. .. . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi-~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~-gl-~----~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDI-VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGK-GI-T----PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCC-CC-C----HHHHHHHHhc--CCC-EEEecccccC
Confidence 58899998 433223 33445555558999999999987652 11 1 1222333322 233 4567999986
Q ss_pred CCCCCCCcccCcccceee---ccccCCC-CCCCCceEEEEcCeEEE--EEecCCCcCCCChHHHHHHHHHhccccCCCCC
Q 046207 232 YAPEIGENVPFKPYTHRY---HVPYRAS-QSTSPLWYSIKRASAYI--IVLSSYSAYGKYTPQYAWLEKELPKVNRAETP 305 (458)
Q Consensus 232 ~~~~~~~~~~~~~~~~~f---~~P~~~~-~~~~~~~ys~~~g~~~f--i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 305 (458)
.. . ...+.+.. -.|.+-+ ......|..++.++.++ +.|-..........-++-+++.+++.+. +.+
T Consensus 71 ~g-e------l~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK-E------ILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc-h------HHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 1 11111111 1111111 11133467777777554 4443222211122223445555655443 577
Q ss_pred eEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 306 WLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 306 ~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
.+||.+|.-..+ + ...+.. .-..+||+++.||+|...-
T Consensus 143 ~IIV~~H~g~ts---------E--k~ala~-~ldg~VdvIvGtHTHv~t~ 180 (255)
T cd07382 143 IIFVDFHAEATS---------E--KIALGW-YLDGRVSAVVGTHTHVQTA 180 (255)
T ss_pred EEEEEECCCCCH---------H--HHHHHH-hCCCCceEEEeCCCCccCC
Confidence 899999984311 1 112221 1233699999999998643
No 69
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.40 E-value=4e-06 Score=95.80 Aligned_cols=191 Identities=15% Similarity=0.134 Sum_probs=94.5
Q ss_pred CCCCeEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEE-cCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 151 PDVPYIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLF-VGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
....++|++++|+|........ ++++.+. +|+.+++ +||++...... .........+.+..+ -.-+.++
T Consensus 657 ~~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~-~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~l---g~d~~~~ 730 (1163)
T PRK09419 657 DNWELTILHTNDFHGHLDGAAKRVTKIKEVKEE-NPNTILVDAGDVYQGSLYS--NLLKGLPVLKMMKEM---GYDASTF 730 (1163)
T ss_pred CceEEEEEEEeecccCCCCHHHHHHHHHHHHhh-CCCeEEEecCCCCCCcchh--hhcCChHHHHHHhCc---CCCEEEe
Confidence 3356999999999955333333 3344444 7887766 99998654310 011112223333332 2346699
Q ss_pred CCcccCCCCCC-----CCcc------c-----CcccceeeccccCCC-CCCCCceEEEEcCe--EEEEEecCCCc-C---
Q 046207 226 GNHELDYAPEI-----GENV------P-----FKPYTHRYHVPYRAS-QSTSPLWYSIKRAS--AYIIVLSSYSA-Y--- 282 (458)
Q Consensus 226 GNHD~~~~~~~-----~~~~------~-----~~~~~~~f~~P~~~~-~~~~~~~ys~~~g~--~~fi~Lds~~~-~--- 282 (458)
||||++..... .... . |............+. ...-..|.-++.++ +-||++-+... .
T Consensus 731 GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~ 810 (1163)
T PRK09419 731 GNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTS 810 (1163)
T ss_pred cccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccC
Confidence 99998643210 0000 0 100000000000000 00112455667777 55676654321 0
Q ss_pred -C--C---ChHHHHHHHHHhcccc-CCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccc
Q 046207 283 -G--K---YTPQYAWLEKELPKVN-RAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYE 354 (458)
Q Consensus 283 -~--~---~~~Q~~WL~~~L~~~~-~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~ 354 (458)
. . .....+.+++..++.+ ..+.+.+|++.|......... .+ ....++.++. +||++|.||+|..-
T Consensus 811 p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 811 PGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 0 1122333444333332 256888999999987532111 11 1223444443 79999999999764
No 70
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.33 E-value=2e-06 Score=78.23 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=43.4
Q ss_pred EEecCCCCCCcH---HHHHHHHhCC--CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh-hccceEEccCCccc
Q 046207 159 IIGDLGQTYDSN---QTFEHYVSNP--KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST-AYQAWIWVPGNHEL 230 (458)
Q Consensus 159 ~~gD~~~~~~~~---~~l~~~~~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 230 (458)
+|||+|.+.... ..+...++.. +.|.+.++||+++.-.......+.-++....+..+. +..|+|.++||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 689999984322 2334445443 559999999999863311111112222233333333 46899999999996
No 71
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.32 E-value=4.1e-06 Score=80.69 Aligned_cols=155 Identities=17% Similarity=0.161 Sum_probs=77.9
Q ss_pred HHHHhCCCCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccc
Q 046207 174 EHYVSNPKGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVP 252 (458)
Q Consensus 174 ~~~~~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 252 (458)
+++.+. +++ ++|.+||++....... ..+.+...+.++.+ ... +.++||||+++..+ .+....+...+|
T Consensus 42 ~~~r~~-~~~~l~ld~GD~~~gs~~~~--~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~p 110 (281)
T cd07409 42 KELRAE-NPNVLFLNAGDAFQGTLWYT--LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKFP 110 (281)
T ss_pred HHHHhc-CCCEEEEeCCCCCCCcchhh--hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 334333 566 5666999987643111 11112223334332 233 55789999865321 111111111122
Q ss_pred cCC------C-----CCCCCceEEEEcCe--EEEEEecCCCc--C-C--C---ChHHHHHHHHHhccccCCCCCeEEEEe
Q 046207 253 YRA------S-----QSTSPLWYSIKRAS--AYIIVLSSYSA--Y-G--K---YTPQYAWLEKELPKVNRAETPWLIVLL 311 (458)
Q Consensus 253 ~~~------~-----~~~~~~~ys~~~g~--~~fi~Lds~~~--~-~--~---~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 311 (458)
.-. . ...-..|..++.++ +-||++-+... . . . .....+.+++.+++++..+.+.+|++.
T Consensus 111 ~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~ 190 (281)
T cd07409 111 VLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALS 190 (281)
T ss_pred EEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 110 0 00112355667777 45566654321 0 0 1 123345566666555445688899999
Q ss_pred ccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 312 HSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 312 H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
|..... .. .+.++ .+||++|+||.|...
T Consensus 191 H~G~~~------------d~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 191 HSGYEV------------DK---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred ccCchh------------HH---HHHHcCCCCcEEEeCCcCccc
Confidence 986421 01 23333 479999999999864
No 72
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.31 E-value=7.1e-06 Score=85.17 Aligned_cols=80 Identities=16% Similarity=0.282 Sum_probs=51.8
Q ss_pred CCCeEEEEEecCCCCCCc--H---HHHHHHHh---------CCCCcEEEEcCccccCCC-CCCCc--------hhHHHHH
Q 046207 152 DVPYIFGIIGDLGQTYDS--N---QTFEHYVS---------NPKGQAVLFVGDLSYADD-HPQHD--------NRRWDSW 208 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~--~---~~l~~~~~---------~~~pd~vl~~GDl~y~~~-~~~~~--------~~~~~~~ 208 (458)
....+++++||+|.+... . ..+...+. ..+++.+|++||+++..+ ++.+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 467899999999977532 1 12222222 227999999999997532 11111 1123345
Q ss_pred HHHHHHHhhccceEEccCCcccC
Q 046207 209 GRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 209 ~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
.+.+..+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56667776778999999999963
No 73
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.31 E-value=2.4e-05 Score=73.91 Aligned_cols=196 Identities=17% Similarity=0.104 Sum_probs=104.0
Q ss_pred eEEEEEecCCCCCCcH----HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSN----QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+||+++||. .+.... ..+..+.++.++||++..||++-.+. .. .. ...+.+.. ..+-++ +.|||++
T Consensus 1 m~ilfiGDi-~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~-Gi-~~----~~~~~L~~--~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDV-YGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGK-GL-TL----KIYEFLKQ--SGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCC-CC-CH----HHHHHHHh--cCCCEE-Eccchhc
Confidence 489999998 332223 33455555558999999999996542 11 11 11222222 245555 5599998
Q ss_pred CCCCCCCCcccCcccceeeccccCCCCCCCCceEEEEcCeEEEEEecCC--CcCCC--ChHHHHHHHHHhccccCCCCCe
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWYSIKRASAYIIVLSSY--SAYGK--YTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~fi~Lds~--~~~~~--~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
+...................+|.. ..+..|..+..++.++-+++-. ..... ...-++-+++.+++++ .+.+.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 643210000000011111122211 1233456667777665555432 11111 1112233444444432 24678
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI- 385 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~- 385 (458)
+||.+|.-.- . .+.....+-+.+|++|+.-|+|...--.++ -++|+.||+-
T Consensus 147 IIVd~Haeat-----------s-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD~ 198 (266)
T TIGR00282 147 IFVDFHAETT-----------S-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITDV 198 (266)
T ss_pred EEEEeCCCCH-----------H-HHHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEecC
Confidence 9999996431 1 234456777789999999999986443322 1678888874
Q ss_pred CCCCCCC
Q 046207 386 GDGGNIE 392 (458)
Q Consensus 386 G~gG~~~ 392 (458)
|.-|...
T Consensus 199 Gm~G~~~ 205 (266)
T TIGR00282 199 GMTGPFG 205 (266)
T ss_pred CcccCcc
Confidence 6666543
No 74
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.29 E-value=2.1e-06 Score=81.32 Aligned_cols=74 Identities=12% Similarity=0.132 Sum_probs=49.2
Q ss_pred eEEEEEecCCCCCCc---------HHHHHHH---HhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-c-cc
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEHY---VSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-Y-QA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~~---~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~-~P 220 (458)
+||++++|+|.+... ...++++ +.+.++|+||++||+++.... .......+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p---~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANP---PAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCC---CHHHHHHHHHHHHHHHhcCCce
Confidence 589999999987421 1223332 223389999999999987641 11222335566666644 3 89
Q ss_pred eEEccCCcccC
Q 046207 221 WIWVPGNHELD 231 (458)
Q Consensus 221 ~~~v~GNHD~~ 231 (458)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999963
No 75
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.28 E-value=2e-06 Score=78.93 Aligned_cols=63 Identities=24% Similarity=0.224 Sum_probs=40.8
Q ss_pred EEEecCCCCCCcHHHHHHHHhC-----------CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH-----hhccce
Q 046207 158 GIIGDLGQTYDSNQTFEHYVSN-----------PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS-----TAYQAW 221 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~~~~~~-----------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l-----~~~~P~ 221 (458)
+++||+|.. ...+.++++. .+.|.++++||+++.+. +..+ ..+.+..+ ....++
T Consensus 1 ~vi~DIHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~~~~---vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGD---LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----DVIE---ILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCC---HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----CHHH---HHHHHHHHHHHHHhcCCeE
Confidence 379999876 3444444432 25799999999999775 2221 22222222 234689
Q ss_pred EEccCCccc
Q 046207 222 IWVPGNHEL 230 (458)
Q Consensus 222 ~~v~GNHD~ 230 (458)
+++.||||.
T Consensus 71 ~~l~GNHE~ 79 (208)
T cd07425 71 HFLLGNHEL 79 (208)
T ss_pred EEeeCCCcH
Confidence 999999996
No 76
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.26 E-value=1.1e-05 Score=84.70 Aligned_cols=188 Identities=15% Similarity=0.127 Sum_probs=101.8
Q ss_pred CCCCeEEEEEecCCCCCC------------cHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYD------------SNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK 214 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~------------~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 214 (458)
....++|+..+|+|..-. .... ++++.++.+..++|.+||++......+. ........+.|..
T Consensus 23 ~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~mN~ 101 (517)
T COG0737 23 ETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDLLNA 101 (517)
T ss_pred CceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHHHHhh
Confidence 457899999999996533 1222 2333344355789999999987553222 1222223444444
Q ss_pred HhhccceEEccCCcccCCCCCCCCcccCcccceeecccc-------C-C-CCCCCCceEEEEcCe--EEEEEecCCCc--
Q 046207 215 STAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPY-------R-A-SQSTSPLWYSIKRAS--AYIIVLSSYSA-- 281 (458)
Q Consensus 215 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~-~-~~~~~~~~ys~~~g~--~~fi~Lds~~~-- 281 (458)
+. .=+.++||||+....+ .+..+......|. . . .....+.|.-++.++ +-+|++.+...
T Consensus 102 m~---yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 102 LG---YDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred cC---CcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 32 2267999999965321 1111222222220 0 0 011124577788887 55677765221
Q ss_pred CC--------CChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 282 YG--------KYTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 282 ~~--------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
+. ......+++++.+.+.+.++.+.+|++.|.+............ ....... .++|+++.||.|.+
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~~-----~~iD~i~~GH~H~~ 247 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVAV-----PGIDLIIGGHSHTV 247 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-ccccccc-----cCcceEeccCCccc
Confidence 11 1134455666666665444478899999999865432211100 0000000 44999999999965
No 77
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.25 E-value=2.6e-06 Score=75.56 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=28.3
Q ss_pred CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 181 KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 181 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++|.|+++||++.... . ..+ .+.++.+ ..|++.++||||.
T Consensus 42 ~~d~vi~~GDl~~~~~----~-~~~---~~~l~~~--~~~~~~v~GNHD~ 81 (168)
T cd07390 42 PDDTVYHLGDFSFGGK----A-GTE---LELLSRL--NGRKHLIKGNHDS 81 (168)
T ss_pred CCCEEEEeCCCCCCCC----h-HHH---HHHHHhC--CCCeEEEeCCCCc
Confidence 6899999999998754 2 221 2333332 3589999999995
No 78
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.18 E-value=3.8e-06 Score=84.82 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=47.2
Q ss_pred eEEEEEecCCCCCCc---------HHHHHH---HHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccce
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEH---YVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAW 221 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~---~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~ 221 (458)
+||++++|+|.+... ...++. ++...+||+||++||+++.... .......+.+++..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p---~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP---PSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC---cHHHHHHHHHHHHHHHhcCCcE
Confidence 589999999987321 111222 2233499999999999986541 11111223444455443 5899
Q ss_pred EEccCCcccC
Q 046207 222 IWVPGNHELD 231 (458)
Q Consensus 222 ~~v~GNHD~~ 231 (458)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999963
No 79
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=98.10 E-value=5.5e-05 Score=79.94 Aligned_cols=189 Identities=13% Similarity=0.093 Sum_probs=90.1
Q ss_pred CCCCeEEEEEecCCCCCC-------cHHH----HHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYD-------SNQT----FEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKS 215 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-------~~~~----l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l 215 (458)
....++|+.++|+|.... .... ++++.+. ...-++|.+||++...... .........+.+..+
T Consensus 31 ~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~~~~g~~~i~~mN~~ 108 (551)
T PRK09558 31 KTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLI 108 (551)
T ss_pred CceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--hhcCCchhHHHHhcC
Confidence 346799999999997532 1222 2233211 1345899999988643210 000111122333332
Q ss_pred hhccceEEccCCcccCCCCCCCCcccCcccceeeccccC-------CCC-CCCCceEEEEcCe--EEEEEecCCCc--C-
Q 046207 216 TAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR-------ASQ-STSPLWYSIKRAS--AYIIVLSSYSA--Y- 282 (458)
Q Consensus 216 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~~~-~~~~~~ys~~~g~--~~fi~Lds~~~--~- 282 (458)
. .=+.++||||+++... .+........+|.- ..+ ..-..|..++.++ +-||++-+... +
T Consensus 109 --g-~Da~tlGNHEFD~G~~-----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --G-YDAMAVGNHEFDNPLS-----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --C-CCEEcccccccCcCHH-----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 1 2256789999975421 11111111111210 000 1113456667777 45566644321 0
Q ss_pred CC-------ChHHHHHHHHHhccccC-CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc---CccEEEecccc
Q 046207 283 GK-------YTPQYAWLEKELPKVNR-AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH---KVDLVVAGHVH 351 (458)
Q Consensus 283 ~~-------~~~Q~~WL~~~L~~~~~-~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~---~Vdlvl~GH~H 351 (458)
.. .....+-+++..++.+. .+.+.+|++.|......... .+..... ..+.++. +||++|.||.|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d---~~la~~~~~~~IDvIlgGHsH 255 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGD---VEMARSLPAGGLDMIVGGHSQ 255 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccH---HHHHHhCCccCceEEEeCCCC
Confidence 00 01112223333333321 46788999999987532211 0000001 2344443 79999999999
Q ss_pred ccc
Q 046207 352 SYE 354 (458)
Q Consensus 352 ~y~ 354 (458)
..-
T Consensus 256 ~~~ 258 (551)
T PRK09558 256 DPV 258 (551)
T ss_pred ccc
Confidence 753
No 80
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.09 E-value=1.1e-05 Score=79.90 Aligned_cols=75 Identities=12% Similarity=0.033 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCc---------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHH-HHHHHh-hccc
Q 046207 155 YIFGIIGDLGQTYDS---------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGR-FVEKST-AYQA 220 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~-~~~~l~-~~~P 220 (458)
+||+++||+|.+... ...+++++ .+.++|+||++||+++..... .........+ +++.+. ..+|
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~--~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAI--TQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCC--CHHHHHHHHHHHHHHHHHCCCe
Confidence 589999999987432 12333332 223999999999999864311 1122222222 244443 3689
Q ss_pred eEEccCCcccC
Q 046207 221 WIWVPGNHELD 231 (458)
Q Consensus 221 ~~~v~GNHD~~ 231 (458)
++.++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999964
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.95 E-value=7.3e-05 Score=78.80 Aligned_cols=146 Identities=20% Similarity=0.160 Sum_probs=72.0
Q ss_pred CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccC------
Q 046207 181 KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYR------ 254 (458)
Q Consensus 181 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~------ 254 (458)
..-++|.+||++....... ....+...+.+..+ --=+.++||||+++... .+..+.....+|.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~--~~~g~~~i~~~N~~---g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFT--LFGGRADAALMNAA---GFDFFTLGNHEFDAGNE-----GLKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CCeEEEECCCCCCCccchh--hcCCHHHHHHHhcc---CCCEEEeccccccCCHH-----HHHHHHHhCCCCEEEEeeec
Confidence 3458899999986543110 01111122333322 22367999999865321 11111111112210
Q ss_pred --CCC--CCCCceEEEEcCe--EEEEEecCCCc-C---CCC-----hHHHHHHH---HHhccccCCCCCeEEEEeccccc
Q 046207 255 --ASQ--STSPLWYSIKRAS--AYIIVLSSYSA-Y---GKY-----TPQYAWLE---KELPKVNRAETPWLIVLLHSPWY 316 (458)
Q Consensus 255 --~~~--~~~~~~ys~~~g~--~~fi~Lds~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~~~Iv~~H~P~~ 316 (458)
... ..-..|..+++++ +-||+|.+... . ... ....+=++ ++|++ .+.+.+|++.|....
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 000 0113455667776 66788865221 0 000 11112122 33443 567889999997532
Q ss_pred cCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 317 NSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
. . ..+.++ .+||++|+||+|.+-
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 1 1 123333 279999999999864
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.93 E-value=2.4e-05 Score=67.54 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=38.9
Q ss_pred EEEecCCCCCC-cHHHHHHHHhC-CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHH-HhhccceEEccCCcc
Q 046207 158 GIIGDLGQTYD-SNQTFEHYVSN-PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEK-STAYQAWIWVPGNHE 229 (458)
Q Consensus 158 ~~~gD~~~~~~-~~~~l~~~~~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~-l~~~~P~~~v~GNHD 229 (458)
+++||.+...+ -...++.+.++ .+.|++|++||+.-... ... .|.+.+.. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~~~---~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDE----DDE---ELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCcc----chh---hHHHHhcCCccCCCCEEEECCCCC
Confidence 36888865421 12223333322 27999999999987654 222 33333332 234689999999996
No 83
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.89 E-value=7.4e-05 Score=72.92 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=26.5
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|++.|..-+. .+ ..+.++. +||++|.||+|.+-
T Consensus 206 ~gvD~II~LsH~g~~~---------~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS---------IE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc---------hH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 5678899999984211 11 1244443 79999999999864
No 84
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.84 E-value=0.00038 Score=75.69 Aligned_cols=197 Identities=16% Similarity=0.082 Sum_probs=93.5
Q ss_pred ECCCCCCCCCCeEEEEEecCCCCCC-------------cHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCch----
Q 046207 144 TTPPKVGPDVPYIFGIIGDLGQTYD-------------SNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDN---- 202 (458)
Q Consensus 144 ~T~p~~~~~~~~~f~~~gD~~~~~~-------------~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~---- 202 (458)
.+.|..+....++|+..+|+|.... .... ++++.+...--++|..||++....+.+...
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~ 184 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDP 184 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccc
Confidence 3445544556899999999996521 0112 233333312348999999998754211100
Q ss_pred -hHHH--HHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCC-------CC-CCCCceEEEEc---
Q 046207 203 -RRWD--SWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRA-------SQ-STSPLWYSIKR--- 268 (458)
Q Consensus 203 -~~~~--~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ys~~~--- 268 (458)
...+ -..+.|..+. -=..++||||+++..+ .+..+.....+|.-. .+ ..-..|--++.
T Consensus 185 ~~~g~~~P~i~amN~LG---yDA~tLGNHEFDyG~d-----~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~ 256 (814)
T PRK11907 185 VEEGEQHPMYAALEALG---FDAGTLGNHEFNYGLD-----YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFT 256 (814)
T ss_pred cccCcchHHHHHHhccC---CCEEEechhhcccCHH-----HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEe
Confidence 0000 1233333332 2256999999865321 111111111122110 00 00122333333
Q ss_pred --Ce------EEEEEecCCCc--CCC--------ChHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHH
Q 046207 269 --AS------AYIIVLSSYSA--YGK--------YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMR 330 (458)
Q Consensus 269 --g~------~~fi~Lds~~~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~ 330 (458)
++ +-||++-+..- +.. ...-.+.+++...+.+..+.+.+|++.|..+.........++. .
T Consensus 257 d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~--~ 334 (814)
T PRK11907 257 DTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV--G 334 (814)
T ss_pred cCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccch--h
Confidence 22 56677654321 110 1122233333333333356888999999987432211111111 1
Q ss_pred HHHHHHHHHcCccEEEecccccc
Q 046207 331 VAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 331 ~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
..+.+--+||++|.||.|..
T Consensus 335 ---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 335 ---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred ---hHHhcCCCCCEEEECCCCCc
Confidence 12222347999999999984
No 85
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.84 E-value=2.7e-05 Score=69.29 Aligned_cols=70 Identities=16% Similarity=0.267 Sum_probs=42.5
Q ss_pred EEEecCCCCCCc--------------HHH---HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 158 GIIGDLGQTYDS--------------NQT---FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 158 ~~~gD~~~~~~~--------------~~~---l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
++++|+|.+... .+. +.++++..+||.++++||+++..... ....+.... .+......+|
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 77 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGL--SRQEFEEVA-FLRLLAKDVD 77 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccccc--CHHHHHHHH-HHHhccCCCe
Confidence 368899887421 122 23344444999999999999764311 112222211 2333345789
Q ss_pred eEEccCCccc
Q 046207 221 WIWVPGNHEL 230 (458)
Q Consensus 221 ~~~v~GNHD~ 230 (458)
+++++||||.
T Consensus 78 v~~i~GNHD~ 87 (172)
T cd07391 78 VILIRGNHDG 87 (172)
T ss_pred EEEEcccCcc
Confidence 9999999995
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.73 E-value=0.00077 Score=56.96 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCc--------------HHHHHHHHhCCC-CcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc
Q 046207 156 IFGIIGDLGQTYDS--------------NQTFEHYVSNPK-GQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA 220 (458)
Q Consensus 156 ~f~~~gD~~~~~~~--------------~~~l~~~~~~~~-pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P 220 (458)
.+.++||+|.+... ...+..+.+..+ -|.+.++||++-... . -....+.++.+.. -
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n----~---~~~a~~IlerLnG--r 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN----R---ERAAGLILERLNG--R 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc----h---hhHHHHHHHHcCC--c
Confidence 46789999987431 223444444443 478999999997654 2 1234556666543 3
Q ss_pred eEEccCCccc
Q 046207 221 WIWVPGNHEL 230 (458)
Q Consensus 221 ~~~v~GNHD~ 230 (458)
...|+||||-
T Consensus 76 khlv~GNhDk 85 (186)
T COG4186 76 KHLVPGNHDK 85 (186)
T ss_pred EEEeeCCCCC
Confidence 4889999993
No 87
>PHA02239 putative protein phosphatase
Probab=97.70 E-value=7.5e-05 Score=69.70 Aligned_cols=70 Identities=13% Similarity=0.238 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++++++||+|..... .+.++.+.... ..|.++++||+++.+. +.. +.+..+++.+....+++.++||||.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~----~s~--~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGK----RSK--DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCC----ChH--HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 478999999965322 22233332222 3599999999999775 221 2222233322234578999999995
No 88
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.68 E-value=9.3e-05 Score=69.30 Aligned_cols=65 Identities=35% Similarity=0.518 Sum_probs=43.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC-------------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP-------------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~-------------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
|++++||+|... ..+.++++.. +.|.++++||+++.+. +. ....+.+..+.....++
T Consensus 2 ~i~vigDIHG~~---~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~----~s---~evl~~l~~l~~~~~~~ 71 (234)
T cd07423 2 PFDIIGDVHGCY---DELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP----DS---PEVLRLVMSMVAAGAAL 71 (234)
T ss_pred CeEEEEECCCCH---HHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC----CH---HHHHHHHHHHhhCCcEE
Confidence 799999999763 4444444332 2589999999999765 21 22334444443334678
Q ss_pred EccCCccc
Q 046207 223 WVPGNHEL 230 (458)
Q Consensus 223 ~v~GNHD~ 230 (458)
++.||||.
T Consensus 72 ~v~GNHE~ 79 (234)
T cd07423 72 CVPGNHDN 79 (234)
T ss_pred EEECCcHH
Confidence 99999995
No 89
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.60 E-value=0.00013 Score=67.57 Aligned_cols=70 Identities=21% Similarity=0.358 Sum_probs=47.3
Q ss_pred eEEEEEecCCCCCCc--------------HHHHHHHH---hCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 155 YIFGIIGDLGQTYDS--------------NQTFEHYV---SNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~--------------~~~l~~~~---~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
-+.++++|+|.+... .++++++. +..+||.+|++||+.+... ....++.+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~----~~~~~~~~~~~l~~~-- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK----KGLEWRFIREFIEVT-- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC----ChHHHHHHHHHHHhc--
Confidence 467899999987421 13344333 3348999999999997654 223455555555543
Q ss_pred ccceEEccCCccc
Q 046207 218 YQAWIWVPGNHEL 230 (458)
Q Consensus 218 ~~P~~~v~GNHD~ 230 (458)
..+++.++||||.
T Consensus 89 ~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 FRDLILIRGNHDA 101 (225)
T ss_pred CCcEEEECCCCCC
Confidence 3589999999994
No 90
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.54 E-value=0.0017 Score=70.49 Aligned_cols=48 Identities=25% Similarity=0.262 Sum_probs=29.4
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccEEEecccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDLVVAGHVHSYER 355 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdlvl~GH~H~y~r 355 (458)
.+.+.+|++.|..+-..... ...+. .-. .+.+. +||++|.||+|..-.
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~-~l~~v~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASY-YLTEVPGVDAVLMGHSHTEVK 291 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhH-HHhcCCCCCEEEECCCCCccc
Confidence 56888999999987432111 01111 111 13443 799999999998653
No 91
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.51 E-value=0.0013 Score=75.44 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEeccccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSYE 354 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y~ 354 (458)
.+.+.+|++.|...-....... ......+|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~-----~en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSG-----AEDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCC-----cchHHHHHHHhCCCCcEEEeCCCcccc
Confidence 5788899999998754321111 11223345544 379999999999874
No 92
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.50 E-value=0.00017 Score=68.90 Aligned_cols=64 Identities=28% Similarity=0.399 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++++++||+|... ..+.++++. .+.|.++++||+++.+. +. ....+.+..+ ..+++.|.||||.
T Consensus 1 M~~~vIGDIHG~~---~~l~~ll~~~~~~~~~D~li~lGDlVdrGp----~s---~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCY---DELQRLLEKIDFDPAKDTLWLVGDLVNRGP----DS---LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCH---HHHHHHHHhcCCCCCCCEEEEeCCccCCCc----CH---HHHHHHHHhc--CCCeEEEecChhH
Confidence 3689999999663 334444332 26899999999999875 22 1223333333 3468899999996
No 93
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.48 E-value=0.00027 Score=66.56 Aligned_cols=74 Identities=16% Similarity=0.337 Sum_probs=46.8
Q ss_pred EEEecCCCCCCc--HH---HHHHHHhCC-----CCcEEEEcCccccCCCC-CCCc--------hhHHHHHHHHHHHHhhc
Q 046207 158 GIIGDLGQTYDS--NQ---TFEHYVSNP-----KGQAVLFVGDLSYADDH-PQHD--------NRRWDSWGRFVEKSTAY 218 (458)
Q Consensus 158 ~~~gD~~~~~~~--~~---~l~~~~~~~-----~pd~vl~~GDl~y~~~~-~~~~--------~~~~~~~~~~~~~l~~~ 218 (458)
+++||+|.+... .. .+.+.++.. ++|.|+++||+++.... .... ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999976431 22 223332222 56999999999986320 0000 12244456677777777
Q ss_pred cceEEccCCcccC
Q 046207 219 QAWIWVPGNHELD 231 (458)
Q Consensus 219 ~P~~~v~GNHD~~ 231 (458)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999973
No 94
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.48 E-value=0.00026 Score=66.75 Aligned_cols=66 Identities=27% Similarity=0.356 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC------------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceE
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP------------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWI 222 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~------------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 222 (458)
+|++++||+|.. ...+.++++.. +-|.++++||+++.+. +.. ...+.+..+.....++
T Consensus 1 ~~~~vIGDIHG~---~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp----~S~---~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 1 MKYDIIGDIHGC---YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP----HSL---RMIEIVWELVEKKAAY 70 (245)
T ss_pred CceEEEEECccC---HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc----ChH---HHHHHHHHHhhCCCEE
Confidence 378999999966 34444444331 2478999999999875 221 1223333333345789
Q ss_pred EccCCccc
Q 046207 223 WVPGNHEL 230 (458)
Q Consensus 223 ~v~GNHD~ 230 (458)
++.||||.
T Consensus 71 ~l~GNHE~ 78 (245)
T PRK13625 71 YVPGNHCN 78 (245)
T ss_pred EEeCccHH
Confidence 99999994
No 95
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=97.46 E-value=0.0092 Score=54.58 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=126.1
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 155 YIFGIIGDLGQTYDSNQT----FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+|++++||. .+.....+ |..+.++.++||||..|-++-.+. .--|+.+..+++ ..+- +.+.|||=|
T Consensus 1 mriLfiGDv-vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-----Git~k~y~~l~~---~G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDV-VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF-----GITEKIYKELLE---AGAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecc-cCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc-----CCCHHHHHHHHH---hCCC-EEecccccc
Confidence 589999999 44333343 344555558999999999986653 233444444433 2334 459999998
Q ss_pred CCCCCCCCcccCcccceeeccccCCCC-CCCCceEEEEcCeEEEEEecC--CCcCCC-ChHHHHHHHHHhccccCCCCCe
Q 046207 231 DYAPEIGENVPFKPYTHRYHVPYRASQ-STSPLWYSIKRASAYIIVLSS--YSAYGK-YTPQYAWLEKELPKVNRAETPW 306 (458)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ys~~~g~~~fi~Lds--~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~ 306 (458)
..... ..+..-..++--|.+-+. ..+..|+-|...+..+.+.+- ...... ...-+.-+++.|.+.+ .+++.
T Consensus 71 d~~ei----~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKEI----LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchHH----HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 53211 111111222333433322 224557777776655544443 222111 2223444556665543 34568
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI- 385 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~- 385 (458)
+||-+|.-.-+... +| -++-+.+|.+|+-=|+|....-.++ -++|+.|++-
T Consensus 146 iiVDFHAEtTSEK~-----------a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTDv 197 (266)
T COG1692 146 IIVDFHAETTSEKN-----------AF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITDV 197 (266)
T ss_pred EEEEccccchhhhh-----------hh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEecC
Confidence 99999975432111 11 1233457999999999986544332 2667888764
Q ss_pred CCCCCCCCCCCCCCCCCCCCcceeeCceeEEEEEEecCceEEEE--EE--EcCCCceeeeeEEEEEee
Q 046207 386 GDGGNIEGLADRYTEPQPSYSAYREASFGHAMLEIKNRTHAHFT--WH--RNHDNEAVVADSQWLFNR 449 (458)
Q Consensus 386 G~gG~~~~~~~~~~~~~p~~s~~~~~~~Gf~~l~v~~~~~~~~~--~~--~~~dg~~~~~D~~~i~~~ 449 (458)
|.-|..... --+. +.-....|..... .++++.++. +++. .+ +...|+++-+..+.|..+
T Consensus 198 GMtG~~dSv-iG~~-~e~~i~rFl~~~p--~rfeva~g~-~~l~GV~ieid~~Tg~a~kie~Iri~~~ 260 (266)
T COG1692 198 GMTGPYDSV-IGMN-PEEPIKRFLTGLP--QRFEVASGP-AQLNGVLIEIDDRTGKAVKIERIRIGED 260 (266)
T ss_pred ccccccccc-ccCC-hhHHHHHHHhCCC--ceeEecCCC-cEEEEEEEEecCCCCceEEEEEEEecCC
Confidence 444442211 0010 1111233444444 555554432 2211 12 223477766666666544
No 96
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.43 E-value=0.00021 Score=65.63 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=40.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|.. ...+.++++. .++|.++++||+++.+. +. . +.++.+.. .+++.+.||||.
T Consensus 2 ri~~isDiHg~---~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~----~~---~---~~~~~l~~-~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGH---YSLLQKALDAVGFDPARDRLISVGDLIDRGP----ES---L---ACLELLLE-PWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCC---HHHHHHHHHHcCCCCCCCEEEEeCCcccCCC----CH---H---HHHHHHhc-CCEEEeECCChH
Confidence 68999999955 3344444332 26899999999998765 22 1 22222222 468899999995
No 97
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.40 E-value=0.00079 Score=64.38 Aligned_cols=176 Identities=20% Similarity=0.248 Sum_probs=96.3
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHhC--CCCcEEEEcCccccCCCCCC----CchhHHHHHHHHHH----HHhhccceEE
Q 046207 155 YIFGIIGDLGQTYDS-NQTFEHYVSN--PKGQAVLFVGDLSYADDHPQ----HDNRRWDSWGRFVE----KSTAYQAWIW 223 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-~~~l~~~~~~--~~pd~vl~~GDl~y~~~~~~----~~~~~~~~~~~~~~----~l~~~~P~~~ 223 (458)
+||++-||.|..-+. .+++..+.+. .+.|++|+.||+---....+ .-...+.....+++ ...+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999865332 3344544444 38999999999853322100 01233333333332 2345788899
Q ss_pred ccCCcccCCCCCCCCcccCcccceeeccccCCCCCCCCceE-----EEEcCeEEEEEecCCC---cCCCC----------
Q 046207 224 VPGNHELDYAPEIGENVPFKPYTHRYHVPYRASQSTSPLWY-----SIKRASAYIIVLSSYS---AYGKY---------- 285 (458)
Q Consensus 224 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~y-----s~~~g~~~fi~Lds~~---~~~~~---------- 285 (458)
+=||||.. .|. ..+|..+ -...+.|| .+.+|++++-+|..-. +|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999952 121 1234321 11134555 3577899998887532 22211
Q ss_pred -------hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHH-----------------HHHHHHHHHHcC
Q 046207 286 -------TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESM-----------------RVAFESWFVQHK 341 (458)
Q Consensus 286 -------~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~-----------------~~~l~~ll~~~~ 341 (458)
-++.+= ..|.+. +.+--|.+.|-=+.+- .++++...+ ...+++||++-+
T Consensus 146 tiRsiYHvR~~dV--~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISDV--AKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhhh--HHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 122211 122232 2234577888644221 122221111 236788999999
Q ss_pred ccEEEeccccc
Q 046207 342 VDLVVAGHVHS 352 (458)
Q Consensus 342 Vdlvl~GH~H~ 352 (458)
...+|+.|.|.
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999996
No 98
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.34 E-value=0.00047 Score=63.96 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCC-----------CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEcc
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNP-----------KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVP 225 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~-----------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 225 (458)
+.++||+|... ..++++++.. ..|.++++||+++.+. +.. ...+.+..+...-.++.+.
T Consensus 1 ~~vIGDIHG~~---~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp----~S~---~vl~~l~~l~~~~~~~~l~ 70 (222)
T cd07413 1 YDFIGDIHGHA---EKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGP----EIR---ELLEIVKSMVDAGHALAVM 70 (222)
T ss_pred CEEEEeccCCH---HHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCC----CHH---HHHHHHHHhhcCCCEEEEE
Confidence 35899999763 4444443322 3579999999999876 221 2233333333334688899
Q ss_pred CCccc
Q 046207 226 GNHEL 230 (458)
Q Consensus 226 GNHD~ 230 (458)
||||.
T Consensus 71 GNHE~ 75 (222)
T cd07413 71 GNHEF 75 (222)
T ss_pred ccCcH
Confidence 99995
No 99
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.30 E-value=0.0028 Score=67.85 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=28.6
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSY 353 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y 353 (458)
.+.+.+|++.|........... .+... ..+.+ -+||++|+||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~--~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPG--AENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccc--cchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 5688899999998753211111 11111 12344 37999999999985
No 100
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.30 E-value=0.00034 Score=64.67 Aligned_cols=61 Identities=25% Similarity=0.356 Sum_probs=40.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++ ..+.|.++++||+++.+. +.. ...+.+. . ..++.+.||||.
T Consensus 16 ri~visDiHg~~---~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~----~~~---~~l~~l~---~-~~~~~v~GNHE~ 80 (218)
T PRK09968 16 HIWVVGDIHGEY---QLLQSRLHQLSFCPETDLLISVGDNIDRGP----ESL---NVLRLLN---Q-PWFISVKGNHEA 80 (218)
T ss_pred eEEEEEeccCCH---HHHHHHHHhcCCCCCCCEEEECCCCcCCCc----CHH---HHHHHHh---h-CCcEEEECchHH
Confidence 899999999763 33333332 236899999999999875 221 1122222 2 246789999994
No 101
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=97.28 E-value=0.0046 Score=66.40 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=28.3
Q ss_pred CCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHH-cCccEEEecccccc
Q 046207 302 AETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQ-HKVDLVVAGHVHSY 353 (458)
Q Consensus 302 ~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~Vdlvl~GH~H~y 353 (458)
.+.+.+|++.|............++ .... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 5688899999998743211111111 1111 233 47999999999985
No 102
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.22 E-value=0.0072 Score=56.95 Aligned_cols=136 Identities=11% Similarity=0.170 Sum_probs=77.5
Q ss_pred EEEEecCCCCCCcH-----HHHHHHHh-C----------CCCcEEEEcCccccCCCCCC---------------CchhHH
Q 046207 157 FGIIGDLGQTYDSN-----QTFEHYVS-N----------PKGQAVLFVGDLSYADDHPQ---------------HDNRRW 205 (458)
Q Consensus 157 f~~~gD~~~~~~~~-----~~l~~~~~-~----------~~pd~vl~~GDl~y~~~~~~---------------~~~~~~ 205 (458)
++++||+|.+.... +.+..++. + .+...+|++||.+...+-.. ......
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 78999999875432 22222221 1 14457999999998654110 112345
Q ss_pred HHHHHHHHHHhhccceEEccCCcccCCCCCCCCcccCcccceeeccccCCC---CCCCCceEEEEcCeEEEEEecCCCc-
Q 046207 206 DSWGRFVEKSTAYQAWIWVPGNHELDYAPEIGENVPFKPYTHRYHVPYRAS---QSTSPLWYSIKRASAYIIVLSSYSA- 281 (458)
Q Consensus 206 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---~~~~~~~ys~~~g~~~fi~Lds~~~- 281 (458)
+.+..++..+...+|+...|||||-.... +. +..+.. .. +|.... -..-..-|.|++++++|++.....-
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~-lP-Qqplh~--~l--fp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS-LP-QQPLHR--CL--FPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc-CC-CCCCCH--HH--hhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 55677788888899999999999953211 00 111110 11 121100 0001224568899999998776542
Q ss_pred ----CCCChHHHHHHHHHhcc
Q 046207 282 ----YGKYTPQYAWLEKELPK 298 (458)
Q Consensus 282 ----~~~~~~Q~~WL~~~L~~ 298 (458)
|...+.-++.|++.|+.
T Consensus 156 Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 156 DILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHh
Confidence 33445557778887765
No 103
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.15 E-value=0.00061 Score=63.04 Aligned_cols=61 Identities=21% Similarity=0.276 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
|++++||+|... ..+.++++. .+.|-++++||+++.+. +.. ...+.+. . ..++.+.||||.
T Consensus 18 ri~vigDIHG~~---~~L~~lL~~i~~~~~~D~li~lGDlvDrGp----~s~---~vl~~l~---~-~~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHGCF---EQLMRKLRHCRFDPWRDLLISVGDLIDRGP----QSL---RCLQLLE---E-HWVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccCCH---HHHHHHHHhcCCCcccCEEEEcCcccCCCc----CHH---HHHHHHH---c-CCceEeeCchHH
Confidence 899999999763 444444433 25789999999999876 221 1222222 2 246789999994
No 104
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.11 E-value=0.00092 Score=63.58 Aligned_cols=68 Identities=19% Similarity=0.293 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHhC-----CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc---cceEEccC
Q 046207 156 IFGIIGDLGQTYDSNQ-TFEHYVSN-----PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY---QAWIWVPG 226 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~-~l~~~~~~-----~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~---~P~~~v~G 226 (458)
++.++||.|....... .++.+.+. ...+.+|++||+++.+. +... ..+++..+... ..++++.|
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----dS~e---Vld~L~~l~~~~~~~~vv~LrG 75 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----ETRK---VIDFLISLPEKHPKQRHVFLCG 75 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----CHHH---HHHHHHHhhhcccccceEEEec
Confidence 6899999997643322 23333322 13568999999999876 3222 22333333222 25788999
Q ss_pred Cccc
Q 046207 227 NHEL 230 (458)
Q Consensus 227 NHD~ 230 (458)
|||.
T Consensus 76 NHE~ 79 (304)
T cd07421 76 NHDF 79 (304)
T ss_pred CChH
Confidence 9995
No 105
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.03 E-value=0.0009 Score=63.22 Aligned_cols=61 Identities=30% Similarity=0.420 Sum_probs=40.2
Q ss_pred EEEecCCCCCCcHHHHHHHHh----CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 158 GIIGDLGQTYDSNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 158 ~~~gD~~~~~~~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
.++||+|... ..+.++++ ..+.|.++++||+++.+. +. .+..+.+..+. ..+..+.||||.
T Consensus 2 yvIGDIHG~~---~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~s---~evl~~l~~l~--~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCY---DELQRLLEKINFDPAKDRLWLVGDLVNRGP----DS---LETLRFVKSLG--DSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCH---HHHHHHHHhcCCCCCCCEEEEecCcCCCCc----CH---HHHHHHHHhcC--CCeEEEcCCchH
Confidence 5899998763 34444433 235799999999999875 22 12333343332 367899999996
No 106
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.01 E-value=0.0015 Score=59.98 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCc-----------------HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh
Q 046207 155 YIFGIIGDLGQTYDS-----------------NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA 217 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~-----------------~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~ 217 (458)
-+.++++|+|.+... ...++++++..+|+-+|++||+-.+.+.. ...+|+....+++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~--~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKS--LRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCcc--ccccHHHHHHHHHHhcc
Confidence 478899999988531 12344556666999999999998876521 12334443444444333
Q ss_pred ccceEEccCCccc
Q 046207 218 YQAWIWVPGNHEL 230 (458)
Q Consensus 218 ~~P~~~v~GNHD~ 230 (458)
. -|+++.||||-
T Consensus 98 ~-evi~i~GNHD~ 109 (235)
T COG1407 98 R-EVIIIRGNHDN 109 (235)
T ss_pred C-cEEEEeccCCC
Confidence 2 59999999994
No 107
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.96 E-value=0.0012 Score=61.23 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=39.6
Q ss_pred EEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh-ccceEEccCCcccC
Q 046207 159 IIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA-YQAWIWVPGNHELD 231 (458)
Q Consensus 159 ~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 231 (458)
++||+|... ..+.++++. .+.|.+|++||+++.+. .. ....+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~---~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCL---DDLLRLLEKIGFPPNDKLIFLGDYVDRGP----DS---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCH---HHHHHHHHHhCCCCCCEEEEECCEeCCCC----Cc---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 799999653 344443332 27899999999999765 21 122222222221 34789999999963
No 108
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.59 E-value=0.0091 Score=45.52 Aligned_cols=70 Identities=27% Similarity=0.296 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+++..-.. +++.|+|..+... ..-.|+|....+.... ...... .-...++|++|+|+|.|
T Consensus 2 ~P~~l~v~~~~~--~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~----~~~~~~------~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNISP--TSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDW----QEVTVP------GNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEECS--SEEEEEEEESSSTSSSESEEEEEEEETTSSSEE----EEEEEE------TTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECCC--CEEEEEEECCCCCCCCeeEEEEEEEecccceee----eeeeee------eeeeeeeeccCCCCCEE
Confidence 677888887643 6999999988411 2236677665543300 111111 11236788999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
No 109
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=96.54 E-value=0.0035 Score=59.48 Aligned_cols=66 Identities=29% Similarity=0.350 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
++.++||+|...... ..++++.-+.+.|-++++||+++.+. +.. ...+.+..+. ..+..|.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP----~sl---evL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGP----GSL---EVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCC----CHH---HHHHHHHhcC--CCeEEEEChhHH
Confidence 467899998764332 22333322235689999999999876 221 1223333331 235689999995
No 110
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=96.48 E-value=0.011 Score=55.59 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=38.2
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
+-+++.++++++. .+.+||+.|...-... ........+...+...++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 3455555554433 7899999997542111 11223334555555678999999999987654
No 111
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.48 E-value=0.0086 Score=60.50 Aligned_cols=45 Identities=22% Similarity=0.207 Sum_probs=35.1
Q ss_pred CCCeEEEEEecCCCCCC---------cHHHHHHH---HhCCCCcEEEEcCccccCCC
Q 046207 152 DVPYIFGIIGDLGQTYD---------SNQTFEHY---VSNPKGQAVLFVGDLSYADD 196 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~---------~~~~l~~~---~~~~~pd~vl~~GDl~y~~~ 196 (458)
...+||++.+|.|.++. +..++.++ +++.+.|+||..|||+.++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 46799999999998853 44555544 44459999999999999876
No 112
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.43 E-value=0.035 Score=46.67 Aligned_cols=85 Identities=18% Similarity=0.259 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEeCCCC-CCCCCCCCCCCCCCCCccee
Q 046207 331 VAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTIGDGG-NIEGLADRYTEPQPSYSAYR 409 (458)
Q Consensus 331 ~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~G~gG-~~~~~~~~~~~~~p~~s~~~ 409 (458)
+.|.-+-++..||+.+.||+|.++... -+|-.||-.|++- +... .+..
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye-------------------~eg~ffvnPGSaTGAfn~-----~~t~------- 145 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE-------------------HEGKFFVNPGSATGAFNV-----SDTD------- 145 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE-------------------eCCcEEeCCCcccCCCcc-----cccC-------
Confidence 345556677899999999999988754 3566677777653 3211 1111
Q ss_pred eCceeEEEEEEecCceEEEEEEEcCCCceeeeeEEEEEe
Q 046207 410 EASFGHAMLEIKNRTHAHFTWHRNHDNEAVVADSQWLFN 448 (458)
Q Consensus 410 ~~~~Gf~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 448 (458)
.....|..++|...+.+++- ++--||+ |.+|.+...|
T Consensus 146 ~~~PSFvLmDiqg~~~v~Yv-Y~lidge-VkVdki~ykK 182 (183)
T KOG3325|consen 146 IIVPSFVLMDIQGSTVVTYV-YRLIDGE-VKVDKIEYKK 182 (183)
T ss_pred CCCCceEEEEecCCEEEEEE-eeeeCCc-EEEEEEEecC
Confidence 13457999999776655544 3446787 4788887765
No 113
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.28 E-value=0.1 Score=48.51 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=89.6
Q ss_pred EEEecCCCCCCc----HHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCCC
Q 046207 158 GIIGDLGQTYDS----NQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDYA 233 (458)
Q Consensus 158 ~~~gD~~~~~~~----~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 233 (458)
+++||. .+... ...|..+.++.++||||..|.++-.+. .--.+.+.++++ ..+-+ .+.|||=|...
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~-----Git~~~~~~L~~---~GvDv-iT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGF-----GITPKIAEELFK---AGVDV-ITMGNHIWDKK 70 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTS-----S--HHHHHHHHH---HT-SE-EE--TTTTSST
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCC-----CCCHHHHHHHHh---cCCCE-EecCcccccCc
Confidence 367887 33222 234556666669999999999996553 111122222221 23443 48999998532
Q ss_pred CCCCCcccCcccceeeccccCCCC-CCCCceEEEEcCeEEEEEecCC--CcCCCChHHHHHHHHHhccccCCCCCeEEEE
Q 046207 234 PEIGENVPFKPYTHRYHVPYRASQ-STSPLWYSIKRASAYIIVLSSY--SAYGKYTPQYAWLEKELPKVNRAETPWLIVL 310 (458)
Q Consensus 234 ~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ys~~~g~~~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~ 310 (458)
.. ..+-.-..+.--|.+-+. ..+..|..++.++..+.++|-. .......--+..+++.|++. +.+.+.+||=
T Consensus 71 ei----~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 EI----FDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp TH----HHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred HH----HHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 11 111111122223443332 3356788888888777666643 22222223344445555543 2467889999
Q ss_pred eccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccccccccccceeeecCCcccccCCCCCCeEEEe-CCCC
Q 046207 311 LHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTNRFSNVQYNITNGISTPVKDPSAPVYLTI-GDGG 389 (458)
Q Consensus 311 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~yiv~-G~gG 389 (458)
+|.=.-+ .+.-.-++-.-+|.+|+--|+|....-.++ -++|+.||+- |.-|
T Consensus 146 FHAEaTS------------EK~A~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMtG 197 (253)
T PF13277_consen 146 FHAEATS------------EKQAMGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMTG 197 (253)
T ss_dssp EE-S-HH------------HHHHHHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EBE
T ss_pred eecCcHH------------HHHHHHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCcccc
Confidence 9853221 122233556678999999999986443222 2678888864 5555
Q ss_pred CCC
Q 046207 390 NIE 392 (458)
Q Consensus 390 ~~~ 392 (458)
...
T Consensus 198 ~~d 200 (253)
T PF13277_consen 198 PYD 200 (253)
T ss_dssp ESS
T ss_pred Ccc
Confidence 543
No 114
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=96.26 E-value=0.018 Score=54.09 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=36.9
Q ss_pred HHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 292 LEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 292 L~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+++.+++++. +.+.+||+.|-..-.... .......+...+.+.++|+|+.||.|..+-..
T Consensus 162 i~~~i~~lr~-~~D~vIv~~H~G~e~~~~-----p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARARK-KADVVIVSLHWGVEYQYE-----PTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHhc-cCCEEEEEecCccccCCC-----CCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 4444444432 578999999987532111 11222334444445789999999999887543
No 115
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=96.11 E-value=0.16 Score=47.46 Aligned_cols=71 Identities=18% Similarity=0.184 Sum_probs=43.9
Q ss_pred CCCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 151 PDVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
...-.+|+.++|.|.-... +..-+.-|+++++||...-+. ..+-..|.+.+..+.-. =-+++.||||.
T Consensus 58 ~~~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g~-----~~ev~~fn~~~gslph~-yKIVIaGNHEL 125 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLGL-----PEEVIKFNEWLGSLPHE-YKIVIAGNHEL 125 (305)
T ss_pred CCCceEEEEecCcccccCc------cccCCCCceEEeccCCccccC-----HHHHHhhhHHhccCcce-eeEEEeeccce
Confidence 4456899999999865322 112347799999999997543 22223343433322111 13679999998
Q ss_pred CCC
Q 046207 231 DYA 233 (458)
Q Consensus 231 ~~~ 233 (458)
...
T Consensus 126 tFd 128 (305)
T KOG3947|consen 126 TFD 128 (305)
T ss_pred eec
Confidence 654
No 116
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.01 E-value=0.013 Score=56.90 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhcc--ceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQ--AWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+. +..+-+|++||+++.+. +.. +. ...+..+.-.. -++.+.||||.
T Consensus 44 ~i~ViGDIHG~~---~dL~~l~~~~g~~~~~~ylFLGDyVDRG~----~s~--Ev-i~lL~~lki~~p~~v~lLRGNHE~ 113 (305)
T cd07416 44 PVTVCGDIHGQF---YDLLKLFEVGGSPANTRYLFLGDYVDRGY----FSI--EC-VLYLWALKILYPKTLFLLRGNHEC 113 (305)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEECCccCCCC----ChH--HH-HHHHHHHHhhcCCCEEEEeCCCcH
Confidence 589999998653 233333332 24588999999999875 211 11 12222222222 47889999996
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 114 ~ 114 (305)
T cd07416 114 R 114 (305)
T ss_pred H
Confidence 3
No 117
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=95.82 E-value=0.01 Score=55.28 Aligned_cols=174 Identities=13% Similarity=0.135 Sum_probs=96.1
Q ss_pred CcEEEEcCccccCCCCCCCc---hhHHHHHHHH----HHHHhhccceEEccCCcccCCCCCCCCc----ccCcccce---
Q 046207 182 GQAVLFVGDLSYADDHPQHD---NRRWDSWGRF----VEKSTAYQAWIWVPGNHELDYAPEIGEN----VPFKPYTH--- 247 (458)
Q Consensus 182 pd~vl~~GDl~y~~~~~~~~---~~~~~~~~~~----~~~l~~~~P~~~v~GNHD~~~~~~~~~~----~~~~~~~~--- 247 (458)
|--++..||+++.++....+ ..++..|... ..++...+|+|.-.||||.....-.... +....|..
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 44577888999987743221 1222222111 1223335899999999998533210000 00011110
Q ss_pred ---eeccccCCCC--CCCCceEEEEcCeEEEEEecCCCcC-CC-ChHHHHHHHHHhccccCCCCCeEEEEecccccc--C
Q 046207 248 ---RYHVPYRASQ--STSPLWYSIKRASAYIIVLSSYSAY-GK-YTPQYAWLEKELPKVNRAETPWLIVLLHSPWYN--S 318 (458)
Q Consensus 248 ---~f~~P~~~~~--~~~~~~ys~~~g~~~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~--~ 318 (458)
.|.-|...+. .....-||++.|+++.+-+-....- .. ...-+-||+.+|..... ..+-++++.|.-+.. +
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aa-dgrpv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAA-DGRPVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeecc-CCCceeehhhhCccceec
Confidence 1111111111 1234578999999888766543210 01 13346799999987432 334588999987632 2
Q ss_pred CCCCC--------cc------chHHHHHHHHHHHHcCccEEEeccccccccc
Q 046207 319 NSYHY--------ME------GESMRVAFESWFVQHKVDLVVAGHVHSYERT 356 (458)
Q Consensus 319 ~~~~~--------~~------~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~ 356 (458)
..+.. ++ ....+..|...++-|+|.-.+.||.|...-.
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ma 337 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMA 337 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccccee
Confidence 22110 00 2345678888899999999999999987443
No 118
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=95.72 E-value=0.022 Score=54.45 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+ ....+-++++||+++.+. +.. +. ...+..+. ...-++.+.||||.
T Consensus 29 ~i~vvGDiHG~~---~~l~~ll~~~~~~~~~~~vfLGD~VDrG~----~s~--e~-l~~l~~lk~~~p~~v~llrGNHE~ 98 (271)
T smart00156 29 PVTVCGDIHGQF---DDLLRLFDLNGPPPDTNYVFLGDYVDRGP----FSI--EV-ILLLFALKILYPNRVVLLRGNHES 98 (271)
T ss_pred CEEEEEeCcCCH---HHHHHHHHHcCCCCCceEEEeCCccCCCC----ChH--HH-HHHHHHHHhcCCCCEEEEeccccH
Confidence 689999998653 33333332 225688999999999775 211 11 12222221 12357899999997
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 99 ~ 99 (271)
T smart00156 99 R 99 (271)
T ss_pred H
Confidence 3
No 119
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=95.55 E-value=0.067 Score=55.13 Aligned_cols=59 Identities=20% Similarity=0.358 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHc-CccE-EEecccccccc
Q 046207 286 TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQH-KVDL-VVAGHVHSYER 355 (458)
Q Consensus 286 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~Vdl-vl~GH~H~y~r 355 (458)
-.|.+|-.+.++. .+.+-+|++.|.|.-....+ ...+..+...+ ++++ ||-||.|....
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~e~--------~~~~~~ir~~~p~t~IqviGGHshird~ 271 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDDEW--------KSLHAEIRKVHPNTPIQVIGGHSHIRDF 271 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccchhh--------hhHHHHHhhhCCCCceEEECchhhhhhh
Confidence 4577888888877 67888999999997432111 11333444444 5777 99999997543
No 120
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=95.34 E-value=0.03 Score=53.82 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=39.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 230 (458)
.+.++||+|... ..+.++.+ ....+-+|++||+++.+. +.. + ....+..+. ....++.+.||||.
T Consensus 43 ~i~vvGDIHG~~---~dL~~ll~~~~~~~~~~~lfLGDyVDRG~----~s~--e-vl~ll~~lk~~~p~~v~llrGNHE~ 112 (285)
T cd07415 43 PVTVCGDIHGQF---YDLLELFRVGGDPPDTNYLFLGDYVDRGY----YSV--E-TFLLLLALKVRYPDRITLLRGNHES 112 (285)
T ss_pred CEEEEEeCCCCH---HHHHHHHHHcCCCCCCeEEEEeEECCCCc----CHH--H-HHHHHHHHhhcCCCcEEEEecccch
Confidence 488999998653 22333322 224568999999999875 211 1 112222222 12358999999996
No 121
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=95.30 E-value=0.032 Score=54.38 Aligned_cols=66 Identities=17% Similarity=0.058 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCC----CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCcc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNP----KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNHE 229 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~----~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD 229 (458)
++.++||+|... ..+.++.+.. ..+.+|++||+++.+. +.- +. ...+-.+. ...-++.+.||||
T Consensus 52 ~~~vvGDiHG~~---~dL~~il~~~g~~~~~~~~lFLGDyVDRG~----~s~--Ev-l~ll~~lk~~~p~~v~llRGNHE 121 (321)
T cd07420 52 QVTICGDLHGKL---DDLFLIFYKNGLPSPENPYVFNGDFVDRGK----RSI--EI-LIILFAFFLVYPNEVHLNRGNHE 121 (321)
T ss_pred CeEEEEeCCCCH---HHHHHHHHHcCCCCccceEEEeccccCCCC----CcH--HH-HHHHHHHhhcCCCcEEEecCchh
Confidence 689999998663 3344444321 2367999999999876 211 11 12222222 1234788999999
Q ss_pred cC
Q 046207 230 LD 231 (458)
Q Consensus 230 ~~ 231 (458)
..
T Consensus 122 ~~ 123 (321)
T cd07420 122 DH 123 (321)
T ss_pred hh
Confidence 74
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=95.10 E-value=0.039 Score=53.30 Aligned_cols=66 Identities=20% Similarity=0.315 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
.++++||+|... ..+.++.+. +..+-+|++||+++.+. ... +.+ ..+..+.- ..-++.+.||||.
T Consensus 51 ~i~viGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--e~i-~ll~~lk~~~p~~i~llrGNHE~ 120 (293)
T cd07414 51 PLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGK----QSL--ETI-CLLLAYKIKYPENFFLLRGNHEC 120 (293)
T ss_pred ceEEEEecCCCH---HHHHHHHHhcCCCCcceEEEEeeEecCCC----CcH--HHH-HHHHHhhhhCCCcEEEEecccch
Confidence 588999998653 223333322 24567899999999875 211 111 11112211 2247889999997
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 121 ~ 121 (293)
T cd07414 121 A 121 (293)
T ss_pred h
Confidence 3
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=95.06 E-value=0.045 Score=53.06 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhC---CCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc--cceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSN---PKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY--QAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~---~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~ 230 (458)
.+.++||+|... ..+.++.+. ...+-+|++||+++.+. +.. +. ...+..+.-. .-++.+.||||.
T Consensus 44 ~i~vvGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~ 113 (303)
T PTZ00239 44 PVNVCGDIHGQF---YDLQALFKEGGDIPNANYIFIGDFVDRGY----NSV--ET-MEYLLCLKVKYPGNITLLRGNHES 113 (303)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEeeeEcCCCC----CHH--HH-HHHHHHhhhcCCCcEEEEecccch
Confidence 388999998653 333333331 24567999999999875 211 11 1122222212 247889999996
No 124
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.02 E-value=0.071 Score=53.78 Aligned_cols=81 Identities=14% Similarity=0.279 Sum_probs=53.3
Q ss_pred CCCCeEEEEEecCCCCCCc------HHHHHHHHhC----CCCcEEEEcCccccCCC-CCCCc--------hhHHHHHHHH
Q 046207 151 PDVPYIFGIIGDLGQTYDS------NQTFEHYVSN----PKGQAVLFVGDLSYADD-HPQHD--------NRRWDSWGRF 211 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~~------~~~l~~~~~~----~~pd~vl~~GDl~y~~~-~~~~~--------~~~~~~~~~~ 211 (458)
....+++++++|.|.+... ...++.+.-. .+...++.+||+++.-+ ++.++ ..+++.+.++
T Consensus 222 ~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 222 GDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred CCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 3467899999999987421 1112222111 14578999999999654 33322 3456666677
Q ss_pred HHHHhhccceEEccCCcccC
Q 046207 212 VEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 212 ~~~l~~~~P~~~v~GNHD~~ 231 (458)
+..+...+-++..|||||..
T Consensus 302 L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 302 LDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HhhCCCCceEEEecCCCCcc
Confidence 77666678899999999964
No 125
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=95.00 E-value=0.041 Score=54.68 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=40.0
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC---CC-cEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP---KG-QAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~---~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNH 228 (458)
-++.++||+|... ..+..+.+.. .. +.+|++||+++.+. +.. +. ...+..+.- ..-++.+.|||
T Consensus 66 ~~i~VvGDIHG~~---~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp----~Sl--Ev-l~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 66 CEVVVVGDVHGQL---HDVLFLLEDAGFPDQNRFYVFNGDYVDRGA----WGL--ET-FLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CCEEEEEecCCCH---HHHHHHHHHhCCCCCCceEEEeccccCCCC----ChH--HH-HHHHHHHhhccCCeEEEEeeec
Confidence 3689999998663 3344444322 22 45999999998875 211 11 122222221 23478999999
Q ss_pred ccC
Q 046207 229 ELD 231 (458)
Q Consensus 229 D~~ 231 (458)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 974
No 126
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=94.68 E-value=0.049 Score=52.56 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCcccC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 231 (458)
+.++||+|... ..+.++.+ ....+-+|++||+++.+. +.. +.+...+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~---~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQY---YDLLRIFEKCGFPPYSNYLFLGDYVDRGK----HSV--ETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCH---HHHHHHHHHcCCCCcccEEEeeeEecCCC----CHH--HHHHHHHHHhhccCCeEEEEecccchH
Confidence 67899998653 33333332 224456889999999875 211 1111111 1111234688999999963
No 127
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=94.65 E-value=0.15 Score=54.42 Aligned_cols=88 Identities=27% Similarity=0.411 Sum_probs=54.4
Q ss_pred CCCCCccE-EEEecCCCCCceEEEEEcCCCCCCC----eEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCC
Q 046207 50 GFNAPEQV-HITQGDHDGRSVIVSWVTPDEKYPN----VVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKY 124 (458)
Q Consensus 50 ~~~~p~~v-~~~~~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 124 (458)
+..+|..| ++-...-..++++++|.-++.+... .|+|-++..+. .+|.. ...-...|+|+||+|
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~---~~t~~~~~ti~gL~p 507 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYST---LKTKTTTATITGLKP 507 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeE---EecccceEEeeccCC
Confidence 44455442 2233334457999999988765543 45555543211 11110 011234689999999
Q ss_pred CCEEEEEeCC------CCccceEEEECCCC
Q 046207 125 DTKYFYQLGS------GNATRRFHFTTPPK 148 (458)
Q Consensus 125 ~t~Y~Y~v~~------g~~~~~~~f~T~p~ 148 (458)
+|.|.+||.. |..|....|.|.+.
T Consensus 508 ~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 508 GTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 9999999875 56677889999885
No 128
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=94.63 E-value=0.053 Score=52.85 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHh---CCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVS---NPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
+++++||+|... ..+.++.+ .+..+-+|++||+++.+. +.. +.+ ..+..+.- ...++.+.||||.
T Consensus 60 ~i~vvGDIHG~~---~dL~~l~~~~g~~~~~~ylfLGDyVDRG~----~s~--evl-~ll~~lki~~p~~v~llRGNHE~ 129 (320)
T PTZ00480 60 PLKICGDVHGQY---FDLLRLFEYGGYPPESNYLFLGDYVDRGK----QSL--ETI-CLLLAYKIKYPENFFLLRGNHEC 129 (320)
T ss_pred CeEEEeecccCH---HHHHHHHHhcCCCCcceEEEeceecCCCC----CcH--HHH-HHHHHhcccCCCceEEEecccch
Confidence 588999998653 33333332 224567899999999875 211 111 11222211 2257889999996
Q ss_pred C
Q 046207 231 D 231 (458)
Q Consensus 231 ~ 231 (458)
.
T Consensus 130 ~ 130 (320)
T PTZ00480 130 A 130 (320)
T ss_pred h
Confidence 3
No 129
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=94.52 E-value=0.093 Score=51.21 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=39.1
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhCC----CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHh--hccceEEccCCc
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSNP----KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKST--AYQAWIWVPGNH 228 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~~----~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNH 228 (458)
-++.++||+|... ..+.++.+.. .-|-+|++||+++.+. +.. +.+ ..+-.+. ...-++.+.|||
T Consensus 60 ~~~~VvGDIHG~~---~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~----~S~--Evl-~ll~~lki~~p~~v~lLRGNH 129 (316)
T cd07417 60 EKITVCGDTHGQF---YDLLNIFELNGLPSETNPYLFNGDFVDRGS----FSV--EVI-LTLFAFKLLYPNHFHLNRGNH 129 (316)
T ss_pred ceeEEeecccCCH---HHHHHHHHhcCCCCccCeEEEEeeEecCCC----ChH--HHH-HHHHHhhhccCCceEEEeecc
Confidence 3689999998653 3344343322 2257999999999875 211 111 1111221 123478899999
Q ss_pred cc
Q 046207 229 EL 230 (458)
Q Consensus 229 D~ 230 (458)
|.
T Consensus 130 E~ 131 (316)
T cd07417 130 ET 131 (316)
T ss_pred ch
Confidence 96
No 130
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=93.40 E-value=0.17 Score=49.43 Aligned_cols=21 Identities=5% Similarity=0.298 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 046207 330 RVAFESWFVQHKVDLVVAGHV 350 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~ 350 (458)
.+++...+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
No 131
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=92.96 E-value=0.27 Score=46.46 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=44.1
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 288 QYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 288 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
+.+.+.+++++++ ++.+++||++|.-.-.. . ......+.+...+-+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~----~-~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYE----N-YPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCC----C-CCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4478888888876 56889999999753211 1 112333445555555899999999999987654
No 132
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=91.50 E-value=1.2 Score=33.24 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=38.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC----CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK----YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|..+.+.... ..++.|+|...... ..-.|+|......... .+.. ...-..++.+.+|.|++.|
T Consensus 3 ~p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~-------~~~~---~~~~~~~~~i~~l~p~~~Y 70 (93)
T cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWK-------EVEV---TPGSETSYTLTGLKPGTEY 70 (93)
T ss_pred CCCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCE-------Eeec---cCCcccEEEEccccCCCEE
Confidence 34445444443 36999999876432 1234445443211111 1110 0023456788999999999
Q ss_pred EEEeCC
Q 046207 129 FYQLGS 134 (458)
Q Consensus 129 ~Y~v~~ 134 (458)
.++|..
T Consensus 71 ~~~v~a 76 (93)
T cd00063 71 EFRVRA 76 (93)
T ss_pred EEEEEE
Confidence 999864
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=91.39 E-value=1.6 Score=31.40 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=39.7
Q ss_pred CccEEEEecCCCCCceEEEEEcCCCCC--CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEE
Q 046207 54 PEQVHITQGDHDGRSVIVSWVTPDEKY--PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQ 131 (458)
Q Consensus 54 p~~v~~~~~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 131 (458)
|..+++....+ +++.|+|..+.... ...++|........ .... ... .........+.+|+|++.|.++
T Consensus 4 p~~~~~~~~~~--~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~--~~~----~~~~~~~~~i~~L~~~~~Y~v~ 73 (83)
T smart00060 4 PSNLRVTDVTS--TSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWK--EVN----VTPSSTSYTLTGLKPGTEYEFR 73 (83)
T ss_pred CCcEEEEEEeC--CEEEEEECCCCCCCCCccEEEEEEEEecCC--CccE--EEE----ecCCccEEEEeCcCCCCEEEEE
Confidence 33366665544 39999998553221 23566655432211 0011 110 0111467889999999999999
Q ss_pred eCC
Q 046207 132 LGS 134 (458)
Q Consensus 132 v~~ 134 (458)
|..
T Consensus 74 v~a 76 (83)
T smart00060 74 VRA 76 (83)
T ss_pred EEE
Confidence 864
No 134
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=90.73 E-value=0.44 Score=53.10 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=48.0
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCCC-C-----eEEEEecCCCC---ceEEEEEEEEEEecccccceEEEEEecCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKYP-N-----VVTHWEANSKR---KHKTHSIIKTYRYFNYSSGYIHHATIKRL 122 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~-~-----~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 122 (458)
.+|+.|.+-.. .+++++|+|..+.+... + .++|++.+... +..+.|.. +. -.+++|
T Consensus 617 aPP~Nl~lev~--sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~-----------~~--~l~~~L 681 (1381)
T KOG4221|consen 617 APPQNLSLEVV--SSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNT-----------TQ--YLFNGL 681 (1381)
T ss_pred CCCcceEEEec--CCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccch-----------hh--hHhhcC
Confidence 36665666544 45899999998864322 1 34555443321 11222221 11 246789
Q ss_pred CCCCEEEEEeCC------CCccceEEEECC
Q 046207 123 KYDTKYFYQLGS------GNATRRFHFTTP 146 (458)
Q Consensus 123 ~p~t~Y~Y~v~~------g~~~~~~~f~T~ 146 (458)
+|+|.|.+||.. |..+.+..+.|+
T Consensus 682 ep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 682 EPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 999999999875 444567777775
No 135
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.96 E-value=0.39 Score=43.88 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=41.3
Q ss_pred EEEEecCCCCCC--cHHHHHHHHh----CCCCcEEEEcCccccCCCCCC-------CchhHH---HHHHHHHHHHhhccc
Q 046207 157 FGIIGDLGQTYD--SNQTFEHYVS----NPKGQAVLFVGDLSYADDHPQ-------HDNRRW---DSWGRFVEKSTAYQA 220 (458)
Q Consensus 157 f~~~gD~~~~~~--~~~~l~~~~~----~~~pd~vl~~GDl~y~~~~~~-------~~~~~~---~~~~~~~~~l~~~~P 220 (458)
|++++|.+...+ ..+.+.++++ ..+|+.+|++|++++...... ...... ..+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 678999987743 2444555553 337999999999998643100 000011 111233344445789
Q ss_pred eEEccCCcccCC
Q 046207 221 WIWVPGNHELDY 232 (458)
Q Consensus 221 ~~~v~GNHD~~~ 232 (458)
++.+||+||...
T Consensus 81 vvlvPg~~D~~~ 92 (209)
T PF04042_consen 81 VVLVPGPNDPTS 92 (209)
T ss_dssp EEEE--TTCTT-
T ss_pred EEEeCCCccccc
Confidence 999999999743
No 136
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=83.71 E-value=2 Score=39.57 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=37.4
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHH-HHHhhccceEEccCCcccC
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFV-EKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 231 (458)
+.+.||+|......-.+=++.....-.=.|++||+++.+- +. -+.|.-++ -++.-.-.+..+.||||-.
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~----~S--vEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGY----YS--VETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCCCceEeecchhcccc----ch--HHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 4579999865322222222332323345789999999875 21 23332221 1111233477899999953
No 137
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=82.81 E-value=6.1 Score=44.25 Aligned_cols=88 Identities=22% Similarity=0.241 Sum_probs=53.8
Q ss_pred CCCCccEEEEecCCCCCceEEEEEcCCC----CCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 51 FNAPEQVHITQGDHDGRSVIVSWVTPDE----KYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 51 ~~~p~~v~~~~~~~~~~~~~i~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
..+|+.+++...+. +++.|+|..+.- ...-.|+|+...+.... ..... ..+-.-.+.|+||+|+|
T Consensus 820 ~~ap~~~~~~~~s~--s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~-----~~~~~----i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 820 PVAPTKLSAKPLSS--SEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGS-----LSRVQ----IAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCccceeecccC--ceEEEEecCcCccCCccceeEEEEEEcCCCccc-----cccee----ecCCcceEeeeCCCCCc
Confidence 35788877776553 699999965421 23458899988765311 11111 11223447899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCCC
Q 046207 127 KYFYQLGS------GNATRRFHFTTPPKV 149 (458)
Q Consensus 127 ~Y~Y~v~~------g~~~~~~~f~T~p~~ 149 (458)
.|++.+.. |..+....-.|.+.+
T Consensus 889 ~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 889 KYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred eEEEEEEEecCCCCCCCccceeccccCCC
Confidence 99999875 333334444554443
No 138
>PRK10301 hypothetical protein; Provisional
Probab=81.71 E-value=23 Score=29.37 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=11.7
Q ss_pred CCCccEEEEecCCC
Q 046207 52 NAPEQVHITQGDHD 65 (458)
Q Consensus 52 ~~p~~v~~~~~~~~ 65 (458)
.+|.+|.|.+.++.
T Consensus 43 ~~P~~V~L~F~e~v 56 (124)
T PRK10301 43 AAPQALTLNFSEGI 56 (124)
T ss_pred cCCCEEEEEcCCCc
Confidence 47999999998765
No 139
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=77.93 E-value=2.1 Score=42.03 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=38.2
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHH--HHHHHHHHhhccceEEccCCcccC
Q 046207 156 IFGIIGDLGQTYDSN-QTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDS--WGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~-~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~--~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
-+.++||.|...... +.+......+.-.-.|++||+++.+. . ..+. +.-.++ +.-..-++...||||..
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~----~--slE~i~LL~a~K-i~yp~~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGK----Q--SLETICLLFALK-IKYPENVFLLRGNHECA 131 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCc----c--ceEEeehhhhhh-hhCCceEEEeccccccc
Confidence 467899998764321 22222221212245899999999886 1 1111 111111 11234589999999974
No 140
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=73.65 E-value=12 Score=35.84 Aligned_cols=80 Identities=13% Similarity=0.116 Sum_probs=46.0
Q ss_pred CCCCeEEEEEecCCCCCC-cHHHHHHHHhCC--------CCcEEEEcCccccCCCCC-----CCchhHHHHHHH-HH---
Q 046207 151 PDVPYIFGIIGDLGQTYD-SNQTFEHYVSNP--------KGQAVLFVGDLSYADDHP-----QHDNRRWDSWGR-FV--- 212 (458)
Q Consensus 151 ~~~~~~f~~~gD~~~~~~-~~~~l~~~~~~~--------~pd~vl~~GDl~y~~~~~-----~~~~~~~~~~~~-~~--- 212 (458)
.+...+|+++||.+.... ..+.|+++.+.. .|-.+|+.|+++...-.. ..+.+.++.+.. .+
T Consensus 24 ~~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~f 103 (291)
T PTZ00235 24 NDKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKF 103 (291)
T ss_pred CCCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhC
Confidence 345689999999987631 222333332211 388999999998763110 011222333322 12
Q ss_pred HHHhhccceEEccCCccc
Q 046207 213 EKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 213 ~~l~~~~P~~~v~GNHD~ 230 (458)
..+.+..-++.|||-.|-
T Consensus 104 p~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 104 KLILEHCYLIFIPGINDP 121 (291)
T ss_pred hHHHhcCeEEEECCCCCC
Confidence 224456679999999995
No 141
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=73.50 E-value=4.4 Score=37.73 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=37.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHhCCCCcE-EEEcCccccCCCCCCCchhHHHHHHHHHHHHhh--ccceEEccCCccc
Q 046207 156 IFGIIGDLGQTYDSNQTFEHYVSNPKGQA-VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTA--YQAWIWVPGNHEL 230 (458)
Q Consensus 156 ~f~~~gD~~~~~~~~~~l~~~~~~~~pd~-vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~ 230 (458)
-+.+.||.|......-.+-++-.. .||. .|++||+++.+- +..+ -...+-.+.- .-.+-.+.||||.
T Consensus 61 pvtvcGDvHGqf~dl~ELfkiGG~-~pdtnylfmGDyvdrGy----~Sve---tVS~lva~Kvry~~rvtilrGNHEs 130 (319)
T KOG0371|consen 61 PVTVCGDVHGQFHDLIELFKIGGL-APDTNYLFMGDYVDRGY----YSVE---TVSLLVALKVRYPDRVTILRGNHES 130 (319)
T ss_pred ceEEecCcchhHHHHHHHHHccCC-CCCcceeeeeeeccccc----chHH---HHHHHHHhhccccceeEEecCchHH
Confidence 367899998663222222233333 5554 788999998875 2211 1122222221 2346779999996
No 142
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=72.47 E-value=32 Score=27.44 Aligned_cols=71 Identities=11% Similarity=0.117 Sum_probs=43.6
Q ss_pred CCCccEEEEecCCCCCceEEEEEcCCCCC---CCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCC--CCC
Q 046207 52 NAPEQVHITQGDHDGRSVIVSWVTPDEKY---PNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLK--YDT 126 (458)
Q Consensus 52 ~~p~~v~~~~~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~--p~t 126 (458)
.+|+.|.+..-. -..++.|.-+.... .-.|+|....+..+..+.+- ... ...++.|+... +..
T Consensus 23 p~P~nv~~~s~n---f~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~C-~~i--------~~~~Cdlt~~~~~~~~ 90 (107)
T PF01108_consen 23 PAPQNVTVDSVN---FKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPGC-QNI--------TETSCDLTDETSDPSE 90 (107)
T ss_dssp SSCEEEEEEEET---TEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECCE-EEE--------SSSEEECTTCCTTTTS
T ss_pred CCCCeeEEEEEC---CceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccce-ecc--------cccceeCcchhhcCcC
Confidence 368788887764 37999999843222 23788884444444444222 111 12457777754 688
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|+.||..
T Consensus 91 ~Y~~rV~A 98 (107)
T PF01108_consen 91 SYYARVRA 98 (107)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 89999876
No 143
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=72.35 E-value=21 Score=40.65 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=47.4
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEEEEe
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYFYQL 132 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 132 (458)
.|.+ +.-+.-...++.|.|..+.-.+.....|..-=... -.+.-..+. .-.++.+|.||+|.|.|.|||
T Consensus 523 gp~~--~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~~------~n~~e~ti~gL~k~TeY~~~v 591 (1381)
T KOG4221|consen 523 GPVQ--LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRVE------NNATEYTINGLEKYTEYSIRV 591 (1381)
T ss_pred CCcc--ccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEEe------cCccEEEeecCCCccceEEEE
Confidence 4555 33333334799999998863344444443310000 011111111 123556889999999999998
Q ss_pred CC------CCccceEEEECCC
Q 046207 133 GS------GNATRRFHFTTPP 147 (458)
Q Consensus 133 ~~------g~~~~~~~f~T~p 147 (458)
.. |.++..-+++|+.
T Consensus 592 vA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 592 VAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred EEecCCCCCCCCCceEEEecc
Confidence 75 4455577777753
No 144
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=66.02 E-value=27 Score=39.38 Aligned_cols=88 Identities=15% Similarity=0.195 Sum_probs=54.9
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCC----CCceEEEEEEEEEEecccccceEEEEEecCCCCCCEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANS----KRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKY 128 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 128 (458)
+|.+|++.--.+ +.+.|+|.......++...|-.... ..+..+. +. .....+- +.+++-+|.|-..|
T Consensus 617 pP~~v~~~~i~~--t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~-~v-----p~~~~~~-~sa~vv~L~Pwv~Y 687 (1051)
T KOG3513|consen 617 PPPDVHVDDISD--TTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVT-TV-----PGNITGD-ESATVVNLSPWVEY 687 (1051)
T ss_pred CCCceeEeeecc--ceEEEEeecCCCCCCCceEEeEEecCCCCCcceEee-EC-----CCcccCc-cceeEEccCCCcce
Confidence 677888875555 6999999987644455556654322 1233332 21 1112333 56889999999999
Q ss_pred EEEeCC----C--C-ccceEEEECCCCC
Q 046207 129 FYQLGS----G--N-ATRRFHFTTPPKV 149 (458)
Q Consensus 129 ~Y~v~~----g--~-~~~~~~f~T~p~~ 149 (458)
.+||.. | . +.+.-..+|.++.
T Consensus 688 eFRV~AvN~iG~gePS~pS~~~rT~ea~ 715 (1051)
T KOG3513|consen 688 EFRVVAVNSIGIGEPSPPSEKVRTPEAA 715 (1051)
T ss_pred EEEEEEEcccccCCCCCCccceecCCCC
Confidence 999875 3 2 2235567787653
No 145
>COG2372 CopC Uncharacterized protein, homolog of Cu resistance protein CopC [General function prediction only]
Probab=63.28 E-value=13 Score=30.73 Aligned_cols=57 Identities=19% Similarity=0.231 Sum_probs=29.5
Q ss_pred CcchhhHHHHHHHHHHHhheeccCCcccccccCCCCCCCCCCcCCCCCCCCCCCccEEEEecCCC
Q 046207 1 MVGTMDLLTLLLLLLLNIVGICNGGVTSRYVRKAEPSVDMPLAAFPPPPGFNAPEQVHITQGDHD 65 (458)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~ 65 (458)
|.+++|.+.+.++++|+++.....-.+=++.-...|... . ....+|++++|.+++..
T Consensus 1 ~~~~~r~~~~~~~~~l~~~~~~~~a~AHa~l~~s~Pad~-s-------~v~aaP~~i~L~Fse~v 57 (127)
T COG2372 1 MARTARALALSALALLMLALVTPQAFAHAYLVSSNPADN-S-------VVTAAPAAITLEFSEGV 57 (127)
T ss_pred CchhHHHHHHHHHHHHHHHhcCcchhheeeeecCCCCCc-c-------hhhcCceeEEEecCCcc
Confidence 556777765555444444433222222233322223221 0 12358999999998765
No 146
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=62.67 E-value=15 Score=33.46 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=36.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHhCC--CCc-EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc--eEEccCCccc
Q 046207 157 FGIIGDLGQTYDSNQTFEHYVSNP--KGQ-AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA--WIWVPGNHEL 230 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~~~~~~~--~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P--~~~v~GNHD~ 230 (458)
+.+.||+|... --+-++-+.- =|| -.|++||+++.+- + ..+.|.-++ -+..+.| +-.+.||||.
T Consensus 48 VTvCGDIHGQF---yDL~eLFrtgG~vP~tnYiFmGDfVDRGy----y--SLEtfT~l~-~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 48 VTVCGDIHGQF---YDLLELFRTGGQVPDTNYIFMGDFVDRGY----Y--SLETFTLLL-LLKARYPAKITLLRGNHES 116 (306)
T ss_pred eeEeeccchhH---HHHHHHHHhcCCCCCcceEEecccccccc----c--cHHHHHHHH-HHhhcCCceeEEeeccchh
Confidence 45789998652 2233333221 233 3688999998864 2 223443332 2333333 5668999995
No 147
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=62.51 E-value=4.3 Score=42.70 Aligned_cols=51 Identities=16% Similarity=0.276 Sum_probs=34.0
Q ss_pred HHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 172 TFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 172 ~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
++..++++.-.|-+=++||+.+.+. .. + ..+..+....-+=.-|||||+.+
T Consensus 175 al~~lIqrL~VDhLHIvGDIyDRGp----~p---d---~ImD~Lm~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 175 ALSELIQRLAVDHLHIVGDIYDRGP----RP---D---KIMDRLMNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHHHHhhhheeecccccCCCC----Ch---h---HHHHHHhcCCCccccccchHHHH
Confidence 3455666668899999999999876 21 2 33444443344556899999943
No 148
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=59.64 E-value=9.6 Score=37.19 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=35.9
Q ss_pred EEEEecCCCCCCcHHHHH--HHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccC
Q 046207 157 FGIIGDLGQTYDSNQTFE--HYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELD 231 (458)
Q Consensus 157 f~~~gD~~~~~~~~~~l~--~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 231 (458)
+.+.||+|... ...++ ++--.+.---.|++||+++.+-..- +.. .+.-.++ +.-..-++...||||-.
T Consensus 90 iTVCGDIHGQf--~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSi--ECv--lYLwsLK-i~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 90 ITVCGDIHGQF--FDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECV--LYLWSLK-INYPKTLFLLRGNHECR 159 (517)
T ss_pred eeEecccchHH--HHHHHHHHccCCcccceeEeeccccccceeee--ehH--HHHHHHh-cCCCCeEEEecCCcchh
Confidence 56899998653 23222 2222322235789999999874110 111 1111111 11123467799999973
No 149
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=58.58 E-value=33 Score=32.16 Aligned_cols=76 Identities=13% Similarity=0.073 Sum_probs=50.4
Q ss_pred CCCeEEEEEecCCCCCCcHHHHHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCccc
Q 046207 152 DVPYIFGIIGDLGQTYDSNQTFEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHEL 230 (458)
Q Consensus 152 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 230 (458)
+...+|++.+|.+ +..+...++.+++. +|+++|+.|=.+|-.++... ....+.-.+.++.+....+--.|..-|=.
T Consensus 174 dg~~~i~faSDvq-Gp~~~~~l~~i~e~-~P~v~ii~GPpty~lg~r~~-~~~~E~~irNl~~ii~~~~~~lViDHHll 249 (304)
T COG2248 174 DGKSSIVFASDVQ-GPINDEALEFILEK-RPDVLIIGGPPTYLLGYRVG-PKSLEKGIRNLERIIEETNATLVIDHHLL 249 (304)
T ss_pred cCCeEEEEccccc-CCCccHHHHHHHhc-CCCEEEecCCchhHhhhhcC-hHHHHHHHHHHHHHHHhCcceEEEeehhh
Confidence 4568999999995 44567889999988 99999999999976551100 11222234455556555555556776654
No 150
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=55.32 E-value=3.6 Score=38.84 Aligned_cols=124 Identities=11% Similarity=-0.005 Sum_probs=58.3
Q ss_pred ccceEEccCCcccCCCCCCCCcccC---cccceeeccccCCCC-CCCCceEEEEcCeEEE-----EEecCCCcCC-CChH
Q 046207 218 YQAWIWVPGNHELDYAPEIGENVPF---KPYTHRYHVPYRASQ-STSPLWYSIKRASAYI-----IVLSSYSAYG-KYTP 287 (458)
Q Consensus 218 ~~P~~~v~GNHD~~~~~~~~~~~~~---~~~~~~f~~P~~~~~-~~~~~~ys~~~g~~~f-----i~Lds~~~~~-~~~~ 287 (458)
..|+++-+|||++.....++-...- ..-..+..-|.++.. .....-|+.++|+.|+ ++|+....-. .-+.
T Consensus 110 i~gv~~GL~sagtri~~plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph 189 (392)
T COG5555 110 IVGVYPGLGSAGTRINCPLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPH 189 (392)
T ss_pred hcCCCCcccccccccCCceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCC
Confidence 3688999999998644322100000 000000001111110 0113458888888663 3444332211 1256
Q ss_pred HHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccc
Q 046207 288 QYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSY 353 (458)
Q Consensus 288 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y 353 (458)
.++|++++|+. .|...|.+-..-...- ....-+.+.+-+. +++-.++.+|.|.+
T Consensus 190 ~~DWyRrElrd--------yve~~Hr~~vf~Kppv---p~atYd~l~d~yS-wdwgglhlvh~hrf 243 (392)
T COG5555 190 SLDWYRRELRD--------YVENYHRSDVFWKPPV---PPATYDQLKDRYS-WDWGGLHLVHYHRF 243 (392)
T ss_pred chhHHHHHHHH--------HHHhhcCcCcccCCCC---Ccccccccchhee-ccccceeEEEEeee
Confidence 78999999988 3455565431110000 0000111222222 56778889999975
No 151
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=50.32 E-value=25 Score=35.70 Aligned_cols=67 Identities=12% Similarity=0.094 Sum_probs=42.0
Q ss_pred CeEEEEEecCCCCCCcHHHHH---HHHhCC-CCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCc
Q 046207 154 PYIFGIIGDLGQTYDSNQTFE---HYVSNP-KGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNH 228 (458)
Q Consensus 154 ~~~f~~~gD~~~~~~~~~~l~---~~~~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 228 (458)
+.||+++||.... ....++ .+.+.. ..|+++++|++...+. ...+|..+..-...+ .+|+|+.-+|-
T Consensus 5 ~~kILv~Gd~~Gr--~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~----~~~e~~~ykng~~~v--PiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGR--FDELIKRIQKVNKKSGPFDLLICVGNFFGHDT----QNAEVEKYKNGTKKV--PIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCcccc--HHHHHHHHHHHhhcCCCceEEEEecccCCCcc----chhHHHHHhcCCccC--ceeEEEecCCC
Confidence 3699999998432 334443 444443 5899999999998644 445555444332222 57888766665
No 152
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=50.03 E-value=41 Score=36.93 Aligned_cols=110 Identities=12% Similarity=0.045 Sum_probs=64.5
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-----CCCeEEEEecCCCCceEEEEEEE----EEE--e----cccccceEE-E
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-----YPNVVTHWEANSKRKHKTHSIIK----TYR--Y----FNYSSGYIH-H 116 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~----~~~--~----~~~~~~~~~-~ 116 (458)
.+.-++++...-..+++.++|..-..+ -.-.+.|...+........|... ... . ....++-.| -
T Consensus 488 e~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~ 567 (1025)
T KOG4258|consen 488 EDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPG 567 (1025)
T ss_pred ccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccc
Confidence 445577777666678999999877543 13366777776422111111110 011 0 011122344 6
Q ss_pred EEecCCCCCCEEEEEeCC------C----CccceEEEECCCCCCCCCCeEEEEEecC
Q 046207 117 ATIKRLKYDTKYFYQLGS------G----NATRRFHFTTPPKVGPDVPYIFGIIGDL 163 (458)
Q Consensus 117 ~~l~gL~p~t~Y~Y~v~~------g----~~~~~~~f~T~p~~~~~~~~~f~~~gD~ 163 (458)
..+.||+|.|.|.|-|.. + ..|++.-++|.|.. +..++.++..++.
T Consensus 568 ~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~-PspPl~~ls~sns 623 (1025)
T KOG4258|consen 568 FLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDI-PSPPLDVLSKSNS 623 (1025)
T ss_pred eehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCC-CCCcchhhhccCc
Confidence 789999999999999875 1 23568889998753 2345666555554
No 153
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=42.93 E-value=1.8e+02 Score=23.53 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=20.0
Q ss_pred ceEEEEEecCCCCCCEEEEEeC
Q 046207 112 GYIHHATIKRLKYDTKYFYQLG 133 (458)
Q Consensus 112 ~~~~~~~l~gL~p~t~Y~Y~v~ 133 (458)
+-++++.+.++.+|+.|.|||.
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~ 69 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVD 69 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEEC
Confidence 4578899999999999999998
No 154
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=42.32 E-value=1.3e+02 Score=29.17 Aligned_cols=19 Identities=37% Similarity=0.489 Sum_probs=16.1
Q ss_pred EEEecCCCCCCEEEEEeCC
Q 046207 116 HATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~ 134 (458)
..+|.||+||+.|-..|..
T Consensus 261 tetI~~L~PG~~Yl~dV~~ 279 (300)
T PF10179_consen 261 TETIKGLKPGTTYLFDVYV 279 (300)
T ss_pred eeecccCCCCcEEEEEEEE
Confidence 3479999999999888775
No 155
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=41.81 E-value=21 Score=33.67 Aligned_cols=50 Identities=24% Similarity=0.335 Sum_probs=32.3
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCcc-EEEeccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVD-LVVAGHVHS 352 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vd-lvl~GH~H~ 352 (458)
+.|+..|+..++-..+ ++-.|.| -.++-+.+.+|++++++| |||.||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 3577777765433322 2223322 234567889999999999 689999954
No 156
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=40.33 E-value=28 Score=33.12 Aligned_cols=50 Identities=24% Similarity=0.316 Sum_probs=32.7
Q ss_pred HHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCcc-EEEeccccc
Q 046207 290 AWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVD-LVVAGHVHS 352 (458)
Q Consensus 290 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vd-lvl~GH~H~ 352 (458)
+.|+..|+..+.-..+ ..-.|.| -.++-+.+.+|++++++| |||.||+=.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 3577777765332221 2222322 245677899999999999 689999974
No 157
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=39.14 E-value=28 Score=31.59 Aligned_cols=14 Identities=43% Similarity=0.491 Sum_probs=11.6
Q ss_pred CccEEEeccccccc
Q 046207 341 KVDLVVAGHVHSYE 354 (458)
Q Consensus 341 ~Vdlvl~GH~H~y~ 354 (458)
+.+++++||+|...
T Consensus 168 ~~~~iV~GHTh~~~ 181 (207)
T cd07424 168 GVDAVVHGHTPVKR 181 (207)
T ss_pred CCCEEEECCCCCCc
Confidence 45899999999864
No 158
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=38.31 E-value=24 Score=35.76 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=31.4
Q ss_pred HHHHHhCCCCcEEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccceEEccCCcccCC
Q 046207 173 FEHYVSNPKGQAVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQAWIWVPGNHELDY 232 (458)
Q Consensus 173 l~~~~~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 232 (458)
+..++++.-.|-+=++||+.+.+. +. + ..+..+.....+=.-|||||+.+
T Consensus 182 la~~iqrLvVDhLHiVGDIyDRGP----~p---d---~Imd~L~~yhsvDiQWGNHDilW 231 (648)
T COG3855 182 LAYLIQRLVVDHLHIVGDIYDRGP----YP---D---KIMDTLINYHSVDIQWGNHDILW 231 (648)
T ss_pred HHHHHHHHhhhheeeecccccCCC----Cc---h---HHHHHHhhcccccccccCcceEE
Confidence 334445557888999999998876 22 2 23333333334445799999954
No 159
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=34.36 E-value=52 Score=26.05 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=20.5
Q ss_pred cceEEEEEecCCCCCCEEEEEeCC
Q 046207 111 SGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 111 ~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.+-++++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 345788999999999999999974
No 160
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D.
Probab=33.61 E-value=45 Score=26.43 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=31.5
Q ss_pred CCCCCccEEEEecCCCCCceEEEEEcCCCCCCCeEEEEecCCCCceEEEEEEEEEEecccccceEEEEEecCCCCCCEEE
Q 046207 50 GFNAPEQVHITQGDHDGRSVIVSWVTPDEKYPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDTKYF 129 (458)
Q Consensus 50 ~~~~p~~v~~~~~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 129 (458)
....|..+.+-.| ..++|.|...+. ....+.... .... ... ..+-...++++.++||+ |.
T Consensus 30 ~~f~P~~i~v~~G----~~v~l~~~N~~~-~~h~~~i~~----~~~~-----~~l-----~~g~~~~~~f~~~~~G~-y~ 89 (104)
T PF13473_consen 30 FGFSPSTITVKAG----QPVTLTFTNNDS-RPHEFVIPD----LGIS-----KVL-----PPGETATVTFTPLKPGE-YE 89 (104)
T ss_dssp EEEES-EEEEETT----CEEEEEEEE-SS-S-EEEEEGG----GTEE-----EEE------TT-EEEEEEEE-S-EE-EE
T ss_pred CeEecCEEEEcCC----CeEEEEEEECCC-CcEEEEECC----CceE-----EEE-----CCCCEEEEEEcCCCCEE-EE
Confidence 4467888877766 367888976642 222222221 1111 111 12333455677889985 88
Q ss_pred EEeCC
Q 046207 130 YQLGS 134 (458)
Q Consensus 130 Y~v~~ 134 (458)
|.|..
T Consensus 90 ~~C~~ 94 (104)
T PF13473_consen 90 FYCTM 94 (104)
T ss_dssp EB-SS
T ss_pred EEcCC
Confidence 88875
No 161
>KOG4802 consensus Adhesion-type protein [Extracellular structures]
Probab=33.05 E-value=1.1e+02 Score=30.86 Aligned_cols=21 Identities=24% Similarity=0.499 Sum_probs=17.5
Q ss_pred EEEEEecCCCCCCEEEEEeCC
Q 046207 114 IHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 114 ~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
+|...|++|.|+..|+-+|..
T Consensus 313 thq~si~~L~Pns~Y~VevqA 333 (516)
T KOG4802|consen 313 THQFSIKELLPNSSYYVEVQA 333 (516)
T ss_pred cchhhhhhcCCCCeEEEEEEE
Confidence 456669999999999998764
No 162
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=32.78 E-value=56 Score=24.75 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=18.4
Q ss_pred eEEEEEecCCCCCCEEEEEeCC
Q 046207 113 YIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 113 ~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
=++++.+.++ +|..|.|++..
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECC
Confidence 4678899999 99999999985
No 163
>PRK09810 entericidin A; Provisional
Probab=32.34 E-value=37 Score=22.18 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=9.4
Q ss_pred hhHHHHHHHHHHHhheeccC
Q 046207 5 MDLLTLLLLLLLNIVGICNG 24 (458)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (458)
|+.+.+++++++.++..|+.
T Consensus 2 Mkk~~~l~~~~~~~L~aCNT 21 (41)
T PRK09810 2 MKRLIVLVLLASTLLTGCNT 21 (41)
T ss_pred hHHHHHHHHHHHHHHhhhhh
Confidence 55544444333334556653
No 164
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=31.28 E-value=48 Score=30.94 Aligned_cols=43 Identities=12% Similarity=0.257 Sum_probs=21.4
Q ss_pred EEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccc
Q 046207 308 IVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHS 352 (458)
Q Consensus 308 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~ 352 (458)
+|+.|||++-.............+.+.. +.++++ .+++-|+..
T Consensus 56 lIItHHP~~f~~~~~~~~~~~~~~~~~~-li~~~I-~vy~~Ht~l 98 (241)
T PF01784_consen 56 LIITHHPLFFKPLKSLTGDDYKGKIIEK-LIKNGI-SVYSAHTNL 98 (241)
T ss_dssp EEEESS-SSSSTSSHCHCHSHHHHHHHH-HHHTT--EEEEESHHH
T ss_pred EEEEcCchhhcCCccccccchhhHHHHH-HHHCCC-EEEEecccc
Confidence 7778999864332211111123334444 444777 457888864
No 165
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=28.95 E-value=67 Score=25.18 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=20.3
Q ss_pred cceEEEEEecCCCCCCEEEEEeCC
Q 046207 111 SGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 111 ~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.+-++++.+.++.+|..|.|++..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 345788999999999999999963
No 166
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=28.79 E-value=2e+02 Score=31.89 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=43.3
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCCC-CCCeEEEEecCCC----C-ceEEEEEEEEEEecccccceEEEEEecCCCCCC
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDEK-YPNVVTHWEANSK----R-KHKTHSIIKTYRYFNYSSGYIHHATIKRLKYDT 126 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 126 (458)
+|.. |.+.-+ .+++.+.|.-+... +..-|.|...=.. . .-..=|....|.- ....-..-+|.+++|.|.+
T Consensus 334 aP~n--lis~vn-~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P-~q~gLt~~~V~v~~L~ah~ 409 (996)
T KOG0196|consen 334 APRN--LISNVN-GTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTP-RQRGLTETSVTVSDLLAHT 409 (996)
T ss_pred ccce--eeeecc-cceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECC-CCCCcccceEEEecccccc
Confidence 6755 444444 38999999887533 3455666543111 0 0000111122221 1112234578999999999
Q ss_pred EEEEEeCC
Q 046207 127 KYFYQLGS 134 (458)
Q Consensus 127 ~Y~Y~v~~ 134 (458)
.|.+.|..
T Consensus 410 ~YTFeV~A 417 (996)
T KOG0196|consen 410 NYTFEVEA 417 (996)
T ss_pred ccEEEEEE
Confidence 99999875
No 167
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=28.65 E-value=47 Score=26.13 Aligned_cols=66 Identities=21% Similarity=0.267 Sum_probs=37.2
Q ss_pred CCccEEEEecCCCCCceEEEEEcCCC-----C-----------CCCeEEEEecCCCCceEEEEEEEEEEecccccceEEE
Q 046207 53 APEQVHITQGDHDGRSVIVSWVTPDE-----K-----------YPNVVTHWEANSKRKHKTHSIIKTYRYFNYSSGYIHH 116 (458)
Q Consensus 53 ~p~~v~~~~~~~~~~~~~i~W~t~~~-----~-----------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (458)
+|+ |++...+ +++.|++.-+.. . -.-.|.|+...+.. ....+. .-.-.
T Consensus 5 PP~-v~v~~~~---~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~------~~~~~~------~~~~~ 68 (106)
T PF09294_consen 5 PPS-VNVSSCG---GSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNE------KKKEIE------TKNSS 68 (106)
T ss_dssp SSE-EEEEEET---TEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSC------EEEEEE------SSSEE
T ss_pred CCE-EEEEECC---CEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCcc------ceEEEe------ecCCE
Confidence 455 8886554 488888887641 0 12346666655431 111111 11123
Q ss_pred EEecCCCCCCEEEEEeCC
Q 046207 117 ATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 117 ~~l~gL~p~t~Y~Y~v~~ 134 (458)
++|.+|+|+|.|..+|..
T Consensus 69 ~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 69 VTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEES--TTSEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEE
Confidence 579999999999999875
No 168
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=28.42 E-value=49 Score=31.97 Aligned_cols=50 Identities=24% Similarity=0.244 Sum_probs=29.4
Q ss_pred EEEecCCCCCCEEEEEeCC-----CCcc-ceEEEE-C------CCCCCCCCCeEEEEEecCCC
Q 046207 116 HATIKRLKYDTKYFYQLGS-----GNAT-RRFHFT-T------PPKVGPDVPYIFGIIGDLGQ 165 (458)
Q Consensus 116 ~~~l~gL~p~t~Y~Y~v~~-----g~~~-~~~~f~-T------~p~~~~~~~~~f~~~gD~~~ 165 (458)
+.+|.+|+|+|+||+-|-. |.++ -.+.|. | .|..=.+..++.+.++..+.
T Consensus 16 ~~t~~~L~p~t~YyfdVF~vn~~~n~ssay~gt~~~t~~~~r~~~~~Lkdg~l~~~~l~~~~g 78 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVFVVNQLTNNSSAYLGTFARTREENRSKPTRLKDGKLTQVKLKGKGG 78 (300)
T ss_pred eEEeccCCCCCeEEEEEEEEECCCCceeeeeEEEEEEccccCCCcEEcccCcEEEEEECCcCc
Confidence 4578899999999999753 3332 223332 2 22222345677777776653
No 169
>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.
Probab=28.17 E-value=45 Score=28.36 Aligned_cols=21 Identities=43% Similarity=0.735 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHhheeccCCc
Q 046207 6 DLLTLLLLLLLNIVGICNGGV 26 (458)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~ 26 (458)
|+++++|+++++++.+|++..
T Consensus 3 ~~~s~~Lv~~~~~Lvsc~~p~ 23 (142)
T TIGR03042 3 SLASLLLVLLLTFLVSCSGPA 23 (142)
T ss_pred hHHHHHHHHHHHHHHHcCCCc
Confidence 467888888888888887763
No 170
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=26.96 E-value=94 Score=29.08 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=24.4
Q ss_pred EEEEcCccccCCCCCCCchhHHHHHHHHHHHHhhccc-eEEccCCccc
Q 046207 184 AVLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAYQA-WIWVPGNHEL 230 (458)
Q Consensus 184 ~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~~P-~~~v~GNHD~ 230 (458)
-++++||.+...+.........+.|.+.++.+..--+ .++.+| |++
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~~l~~~~~i~pG-H~~ 166 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLAALPDDTLVYCA-HEY 166 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHHcCCCCeEEECC-CCc
Confidence 3788999877654221111223344555555543222 456778 885
No 171
>PF14292 SusE: SusE outer membrane protein
Probab=25.79 E-value=1.9e+02 Score=23.60 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=16.4
Q ss_pred EEEecCCCCCceEEEEEcCCCCCC-CeEEE
Q 046207 58 HITQGDHDGRSVIVSWVTPDEKYP-NVVTH 86 (458)
Q Consensus 58 ~~~~~~~~~~~~~i~W~t~~~~~~-~~v~y 86 (458)
.+.+.....+.++++|..+.-... ..|.|
T Consensus 36 ~i~L~~~~~~a~tftW~~~~~~~~~a~v~Y 65 (122)
T PF14292_consen 36 SIVLDEASDNAVTFTWTAADYGGPDAPVTY 65 (122)
T ss_pred eEEecccCCceEEEEEECCccCCCCCceEE
Confidence 344443333589999998764333 34444
No 172
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=25.55 E-value=54 Score=28.26 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=20.0
Q ss_pred EEecCCCCCCEEEEE--eCCCCc---cceEEEECCCC
Q 046207 117 ATIKRLKYDTKYFYQ--LGSGNA---TRRFHFTTPPK 148 (458)
Q Consensus 117 ~~l~gL~p~t~Y~Y~--v~~g~~---~~~~~f~T~p~ 148 (458)
-.+++|.|||+|+.+ |..|.. +.+-.-.|.|.
T Consensus 104 YqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~ 140 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNR 140 (184)
T ss_pred EEeeccCCCcEEEEEEEEecCccceecceeccccccc
Confidence 467899999999755 554432 23344455553
No 173
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=24.09 E-value=1.7e+02 Score=29.26 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.9
Q ss_pred HHHHhccccCCCCCeEEEEecccc-ccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccccc
Q 046207 292 LEKELPKVNRAETPWLIVLLHSPW-YNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYERTN 357 (458)
Q Consensus 292 L~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r~~ 357 (458)
...+++.++ ++.+-+|++.|+-. |.... ...+.++-.-+...++++++.+|-|..|-..
T Consensus 213 ~~~~v~~a~-k~adlviv~~HwG~ey~~~p------~~~q~~~a~~lidAGa~iIvGhhpHvlqpiE 272 (372)
T COG2843 213 VLAAVLAAK-KGADLVIVQPHWGVEYAYEP------AAGQRALARRLIDAGADIIVGHHPHVLQPIE 272 (372)
T ss_pred hHHHHHhhh-ccCCEEEEeccccccccCCC------cHHHHHHHHHHHhcCcCeEecCCCCcCcceE
Confidence 334444433 45778999999843 33221 2224455555556899999999999987664
No 174
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=23.96 E-value=2.2e+02 Score=24.88 Aligned_cols=52 Identities=17% Similarity=0.130 Sum_probs=32.3
Q ss_pred hHHHHHHHHHhccccCCCCCeEEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecc
Q 046207 286 TPQYAWLEKELPKVNRAETPWLIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGH 349 (458)
Q Consensus 286 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH 349 (458)
++..+=+.+.|++ .-....|+..|+|.+ .+...+.+.+.+.+.++|+++.|=
T Consensus 58 ~~~~~~~~~~l~~---~yP~l~ivg~~~g~f---------~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 58 EEVLEKAAANLRR---RYPGLRIVGYHHGYF---------DEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred HHHHHHHHHHHHH---HCCCeEEEEecCCCC---------ChhhHHHHHHHHHHcCCCEEEEEC
Confidence 4455556666665 212235665666655 123456777888999999999874
No 175
>PRK10799 metal-binding protein; Provisional
Probab=23.64 E-value=1.2e+02 Score=28.33 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=23.6
Q ss_pred EEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEeccccccc
Q 046207 308 IVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYE 354 (458)
Q Consensus 308 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~ 354 (458)
+++.|||++-...... ...........+.++++. +++-|++.-.
T Consensus 59 lIitHHP~~~~~~~~~--~~~~~~~~~~~li~~~i~-vy~~Htn~D~ 102 (247)
T PRK10799 59 AVIVHHGYFWKGESPV--IRGMKRNRLKTLLANDIN-LYGWHLPLDA 102 (247)
T ss_pred EEEECCchhccCCCcc--ccchHHHHHHHHHHCCCe-EEEEecchhh
Confidence 6668999863322111 111233344455567764 5788887543
No 176
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=22.90 E-value=70 Score=29.31 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=11.7
Q ss_pred cCccEEEecccccc
Q 046207 340 HKVDLVVAGHVHSY 353 (458)
Q Consensus 340 ~~Vdlvl~GH~H~y 353 (458)
.+++++++||+|.-
T Consensus 178 ~~~~~vv~GHTh~~ 191 (218)
T PRK09968 178 NGADYFIFGHMMFD 191 (218)
T ss_pred CCCCEEEECCCCcC
Confidence 46789999999974
No 177
>cd02850 Cellulase_N_term Cellulase N-terminus domain. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually catagorized into either exoglucanases which sequentially release sugar units from the cellulose chain and endoglucanases which also attack the chain internally. The N-terminus of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=22.83 E-value=3.4e+02 Score=20.56 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=19.6
Q ss_pred ceEEEEEecCC-CCCCEEEEEeCC
Q 046207 112 GYIHHATIKRL-KYDTKYFYQLGS 134 (458)
Q Consensus 112 ~~~~~~~l~gL-~p~t~Y~Y~v~~ 134 (458)
...+.+.++.| +|||+|+-+++.
T Consensus 55 ~~~~~~DFS~~~~pG~~Y~l~~~~ 78 (86)
T cd02850 55 DNVHIIDFSSYRTEGTGYYLSVDG 78 (86)
T ss_pred CeEEEEEcCCCcCCCCeEEEEECC
Confidence 47889999999 889899888774
No 178
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=22.69 E-value=58 Score=30.28 Aligned_cols=16 Identities=38% Similarity=0.611 Sum_probs=13.4
Q ss_pred CccEEEeccccccccc
Q 046207 341 KVDLVVAGHVHSYERT 356 (458)
Q Consensus 341 ~Vdlvl~GH~H~y~r~ 356 (458)
..+++|+||.|.+...
T Consensus 191 ~p~vii~Gh~h~~~~~ 206 (243)
T cd07386 191 VPDILHTGHVHVYGVG 206 (243)
T ss_pred CCCEEEECCCCchHhE
Confidence 5789999999997654
No 179
>PHA03008 hypothetical protein; Provisional
Probab=22.46 E-value=1.5e+02 Score=26.60 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=28.4
Q ss_pred EEEEeccccccCCCCCCccchHHHHHHHHHHHHcCccEEEecccccccc
Q 046207 307 LIVLLHSPWYNSNSYHYMEGESMRVAFESWFVQHKVDLVVAGHVHSYER 355 (458)
Q Consensus 307 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~Vdlvl~GH~H~y~r 355 (458)
-|++.|-|++.-...+. .++.+.++ +.+-++.+.+.||.-.|..
T Consensus 163 DILITHgPP~GhLD~~v-GC~~Ll~~----I~rVKPKyHVFGh~~~~~~ 206 (234)
T PHA03008 163 DILITASPPFAILDDDL-ACGDLFSK----VIKIKPKFHIFNGLTQFSH 206 (234)
T ss_pred CEEEeCCCCcccccccc-CcHHHHHH----HHHhCCcEEEeCCccccCC
Confidence 38999999987543322 13333333 3355789999999776654
No 180
>PF00879 Defensin_propep: Defensin propeptide The pattern for this Prosite entry doesn't match the propeptide.; InterPro: IPR002366 Defensins are 2-6 kDa, cationic, microbicidal peptides active against many Gram-negative and Gram-positive bacteria, fungi, and enveloped viruses [], containing three pairs of intramolecular disulphide bonds []. On the basis of their size and pattern of disulphide bonding, mammalian defensins are classified into alpha, beta and theta categories. Alpha-defensins, which have been identified in humans, monkeys and several rodent species, are particularly abundant in neutrophils, certain macrophage populations and Paneth cells of the small intestine. Every mammalian species explored thus far has beta-defensins. In cows, as many as 13 beta-defensins exist in neutrophils. However, in other species, beta-defensins are more often produced by epithelial cells lining various organs (e.g. the epidermis, bronchial tree and genitourinary tract). Theta-defensins are cyclic and have so far only been identified in primate phagocytes. Defensins are produced constitutively and/or in response to microbial products or proinflammatory cytokines. Some defensins are also called corticostatins (CS) because they inhibit corticotropin-stimulated corticosteroid production. The mechanism(s) by which microorganisms are killed and/or inactivated by defensins is not understood completely. However, it is generally believed that killing is a consequence of disruption of the microbial membrane. The polar topology of defensins, with spatially separated charged and hydrophobic regions, allows them to insert themselves into the phospholipid membranes so that their hydrophobic regions are buried within the lipid membrane interior and their charged (mostly cationic) regions interact with anionic phospholipid head groups and water. Subsequently, some defensins can aggregate to form `channel-like' pores; others might bind to and cover the microbial membrane in a `carpet-like' manner. The net outcome is the disruption of membrane integrity and function, which ultimately leads to the lysis of microorganisms. Some defensins are synthesized as propeptides which may be relevant to this process - in neutrophils only the mature peptides have been identified but in Paneth cells, the propeptide is stored in vesicles [] and appears to be cleaved by trypsin on activation. ; GO: 0006952 defense response
Probab=21.98 E-value=72 Score=22.01 Aligned_cols=15 Identities=47% Similarity=0.510 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHhh
Q 046207 5 MDLLTLLLLLLLNIV 19 (458)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (458)
||.+.||.+++|.++
T Consensus 1 MRTL~LLaAlLLlAl 15 (52)
T PF00879_consen 1 MRTLALLAALLLLAL 15 (52)
T ss_pred CcHHHHHHHHHHHHH
Confidence 777777765544444
No 181
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.49 E-value=1.3e+02 Score=23.92 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=12.2
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHhC
Q 046207 155 YIFGIIGDLGQTYDSNQTFEHYVSN 179 (458)
Q Consensus 155 ~~f~~~gD~~~~~~~~~~l~~~~~~ 179 (458)
.+|+.+||.++.. .++..+++++
T Consensus 65 ~kfiLIGDsgq~D--peiY~~ia~~ 87 (100)
T PF09949_consen 65 RKFILIGDSGQHD--PEIYAEIARR 87 (100)
T ss_pred CcEEEEeeCCCcC--HHHHHHHHHH
Confidence 4666666665442 4455555544
No 182
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.; GO: 0016787 hydrolase activity; PDB: 3H3E_A 3Q6V_B 3SD9_B 3IOF_A 2GKL_A 1X8I_A 3FAI_A 2QDS_A 3IOG_A 3F9O_A ....
Probab=21.34 E-value=1.3e+02 Score=25.56 Aligned_cols=24 Identities=17% Similarity=0.392 Sum_probs=14.3
Q ss_pred hHHHHHHHHHHHHhhccceEEccC
Q 046207 203 RRWDSWGRFVEKSTAYQAWIWVPG 226 (458)
Q Consensus 203 ~~~~~~~~~~~~l~~~~P~~~v~G 226 (458)
..|..+.+.++.+...-|-+.++|
T Consensus 170 ~~~~~~~~~l~~~~~~~~~~ii~g 193 (194)
T PF00753_consen 170 SNWEESIEALRRLEALDPEVIIPG 193 (194)
T ss_dssp THHHHHHHHHHHHHTSTTSEEEES
T ss_pred HHHHHHHHHHHHHHCCCCCEEEeC
Confidence 455566666666665556565654
No 183
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=21.32 E-value=2e+02 Score=21.51 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=18.5
Q ss_pred cceEEEEEecCCCCCCEEEEEeCC
Q 046207 111 SGYIHHATIKRLKYDTKYFYQLGS 134 (458)
Q Consensus 111 ~~~~~~~~l~gL~p~t~Y~Y~v~~ 134 (458)
.+-.+...=.+|++|..|.|++..
T Consensus 25 ~G~~R~F~T~~L~~G~~y~Y~v~a 48 (75)
T TIGR03000 25 TGTVRTFTTPPLEAGKEYEYTVTA 48 (75)
T ss_pred CccEEEEECCCCCCCCEEEEEEEE
Confidence 344555556799999999999876
No 184
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=20.94 E-value=3.8e+02 Score=21.20 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 046207 330 RVAFESWFVQHKVDLVVAGHVHS 352 (458)
Q Consensus 330 ~~~l~~ll~~~~Vdlvl~GH~H~ 352 (458)
.+.+.+..+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46777888999999988888754
No 185
>PRK13792 lysozyme inhibitor; Provisional
Probab=20.77 E-value=4.2e+02 Score=22.12 Aligned_cols=17 Identities=29% Similarity=0.454 Sum_probs=8.4
Q ss_pred HHHHHHHHHhheeccCC
Q 046207 9 TLLLLLLLNIVGICNGG 25 (458)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ 25 (458)
.+|++.+..++.+|+..
T Consensus 6 ~~ll~~~~~lLsaCs~~ 22 (127)
T PRK13792 6 WLLLAAVPVVLVACGGS 22 (127)
T ss_pred HHHHHHHHhheecccCC
Confidence 33344444445566655
No 186
>PRK10241 hydroxyacylglutathione hydrolase; Provisional
Probab=20.66 E-value=1.4e+02 Score=28.03 Aligned_cols=45 Identities=18% Similarity=0.145 Sum_probs=24.1
Q ss_pred EEEcCccccCCCCCCCchhHHHHHHHHHHHHhhc-cceEEccCCccc
Q 046207 185 VLFVGDLSYADDHPQHDNRRWDSWGRFVEKSTAY-QAWIWVPGNHEL 230 (458)
Q Consensus 185 vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~ 230 (458)
++++||....++.....+...+.+.+.++.+..- .-.++.+| ||+
T Consensus 122 ~lFtGDtlf~~g~gr~f~g~~~~~~~Sl~kl~~l~~~t~i~pg-H~y 167 (251)
T PRK10241 122 YLFCGDTLFSGGCGRLFEGTASQMYQSLKKINALPDDTLICCA-HEY 167 (251)
T ss_pred cEEEcCeeccCCcCCCCCCCHHHHHHHHHHHHcCCCCEEEECC-CCC
Confidence 5899998776543211122234455555555432 22455677 996
Done!