BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046216
(475 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3N|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
Length = 693
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 201/445 (45%), Gaps = 64/445 (14%)
Query: 51 IVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSG 110
IV+ + G GE + +L+R KR +N D+ Y LY S P ++V G
Sbjct: 53 IVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISV-KDG 111
Query: 111 EALGVLADTTRRCEGFLIDLGKESTIQFIAPSSYPVITFGLFTSPTA--VLVSLSH---- 164
A G ++ + + D+G E + I + F + P VL +
Sbjct: 112 VATGYFFNSASKV---IFDVGLEEYDKVIVTIPEDSVEFYVIEGPRIEDVLEKYTELTGK 168
Query: 165 -------AVDNFLCHSSLF-HDFHVQSGNI--------------IHIICSFE-------H 195
A + S + D V+ +I IH + S++
Sbjct: 169 PFLPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYR 228
Query: 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPG 255
FP+PK L +LH K I ++D GI+ + Y + SG + + G F+G++WPG
Sbjct: 229 FPEPKKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSG--MGKFCEIESGELFVGKMWPG 286
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAF------KSVTKTMP----- 304
+PD+ + R WWA L+ +++ GVDGIW DMN+P F + V ++P
Sbjct: 287 TTVYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQFRD 346
Query: 305 ERNIHRGLDEI-----GGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIG 359
+R + D + G H N Y + A +T++G R + +++ F+L+RAG G
Sbjct: 347 DRLVTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEI-FILSRAGYAG 405
Query: 360 SQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAG------NATPRLFG 413
QRYA WTGDN +W+ L + + +VL L +SG P G DIGGF G + + L
Sbjct: 406 IQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLV 465
Query: 414 RWMGIRAVFPFCRGHSETNTIDHEP 438
++ + FPF R H T+ ID EP
Sbjct: 466 KYYALALFFPFYRSHKATDGIDTEP 490
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Casuarine
Length = 870
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 205/475 (43%), Gaps = 76/475 (16%)
Query: 60 TSLYGTGEVSGQLERTGKRIFTW---NTDSWGYGTGTTSLYQSHPWVLAVL-PSGEALGV 115
T++YG GE Q R TW N D+ G GT +LY + + L + SG + GV
Sbjct: 175 TNVYGLGEHVHQQYRHDMNWKTWPIFNRDTTPNGNGT-NLYGAQTFFLCLEDASGLSFGV 233
Query: 116 L---------------ADTTRRCEG---FLIDLGK--ESTIQFI-------APSSYPVIT 148
A T R G F + LG E +Q A SY +
Sbjct: 234 FLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYLELIGRPALPSYWALG 293
Query: 149 FGLFTSPTAVLVSLSHAVDNF--------LCHSSLFHDFHVQSGNIIHIICSFEHFPDPK 200
F L L ++ V+ + H+ + D+ + + + F+ FP+
Sbjct: 294 FHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADI--DYMDERRDFTYDSVDFKGFPE-- 349
Query: 201 SLATDLHLNGFKAIWMLDPGIKHEDG----YFVYDSGPKIDVWIRKPDG-TPFIGEVWPG 255
+LH NG K + ++DP I + Y YD G + +W+ DG TP IGEVWPG
Sbjct: 350 -FVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPG 408
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGV--DGIWNDMNKPAAFKSVTKTMPERN------ 307
FPDYT WW F +N V DGIW DMN+ + F + + N
Sbjct: 409 QTVFPDYTNPNCAVWWTKEFELF-HNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPP 467
Query: 308 -IHRGLDEIGGCQ-----------NHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRA 355
R LD C+ HN+YG MA +T E + +K F+LTR+
Sbjct: 468 FTPRILDGYLFCKTLCMDAVQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILTRS 527
Query: 356 GVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRW 415
GS ++AA W GDN + W+ L SI VL+ L G P GPDI GFA + L RW
Sbjct: 528 TFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRW 587
Query: 416 MGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVLSSR-----PSGMIPFLNILLY 465
M + A +PF R H+ D +P SFG + + SSR ++P+L L +
Sbjct: 588 MQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFF 642
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Bj2661
pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With De-O-Sulfonated Kotalanol
pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Kotalanol
pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Miglitol
pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8
pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8ii
pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Salacinol
Length = 875
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 205/475 (43%), Gaps = 76/475 (16%)
Query: 60 TSLYGTGEVSGQLERTGKRIFTW---NTDSWGYGTGTTSLYQSHPWVLAVL-PSGEALGV 115
T++YG GE Q R TW N D+ G GT +LY + + L + SG + GV
Sbjct: 175 TNVYGLGEHVHQQYRHDMNWKTWPIFNRDTTPNGNGT-NLYGAQTFFLCLEDASGLSFGV 233
Query: 116 L---------------ADTTRRCEG---FLIDLGK--ESTIQFI-------APSSYPVIT 148
A T R G F + LG E +Q A SY +
Sbjct: 234 FLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYLELIGRPALPSYWALG 293
Query: 149 FGLFTSPTAVLVSLSHAVDNF--------LCHSSLFHDFHVQSGNIIHIICSFEHFPDPK 200
F L L ++ V+ + H+ + D+ + + + F+ FP+
Sbjct: 294 FHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADI--DYMDERRDFTYDSVDFKGFPE-- 349
Query: 201 SLATDLHLNGFKAIWMLDPGIKHEDG----YFVYDSGPKIDVWIRKPDG-TPFIGEVWPG 255
+LH NG K + ++DP I + Y YD G + +W+ DG TP IGEVWPG
Sbjct: 350 -FVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPG 408
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGV--DGIWNDMNKPAAFKSVTKTMPERN------ 307
FPDYT WW F +N V DGIW DMN+ + F + + N
Sbjct: 409 QTVFPDYTNPNCAVWWTKEFELF-HNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPP 467
Query: 308 -IHRGLDEIGGCQ-----------NHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRA 355
R LD C+ HN+YG MA +T E + +K F+LTR+
Sbjct: 468 FTPRILDGYLFCKTLCMDAVQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILTRS 527
Query: 356 GVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRW 415
GS ++AA W GDN + W+ L SI VL+ L G P GPDI GFA + L RW
Sbjct: 528 TFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRW 587
Query: 416 MGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVLSSR-----PSGMIPFLNILLY 465
M + A +PF R H+ D +P SFG + + SSR ++P+L L +
Sbjct: 588 MQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFF 642
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|B Chain B, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|C Chain C, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|D Chain D, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPP|A Chain A, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|B Chain B, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|C Chain C, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|D Chain D, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
Length = 898
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 141/299 (47%), Gaps = 34/299 (11%)
Query: 201 SLATDLHLNGFKAIWMLDPGI---KHEDG--YFVYDSGPKIDVWIRKPDG-TPFIGEVWP 254
DLH +G K + +LDP I + +G Y Y+ G VWI + DG TP IGEVWP
Sbjct: 377 QFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWP 436
Query: 255 GPCAFPDYTQSKVRSWWASLVRDFVYN-GVDGIWNDMNKPAAFKS--------------- 298
G +PD+T WWA+ F DG+W DMN+ ++F
Sbjct: 437 GLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDMNEVSSFIQGSTKGCNVNKLNYPP 496
Query: 299 -----VTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLT 353
+ K M + I +D + H++YG MA +T + ++ +K F+LT
Sbjct: 497 FTPDILDKLMYSKTI--CMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNKRSFILT 554
Query: 354 RAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFG 413
R+ GS R+AA W GDN ++WE + SI+ +L+ L G P G DI GF T L
Sbjct: 555 RSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELCR 614
Query: 414 RWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVLSSRP-----SGMIPFLNILLYNC 467
RWM + A +PF R H+ +P FG+ V SSR ++PFL L Y
Sbjct: 615 RWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSSRQYLTIRYTLLPFLYTLFYKA 673
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 667
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 142/319 (44%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD ++ + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WNDMN+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G M R+ E D +K + +R+ IG RY W GDN S W H+ +++
Sbjct: 377 VHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
M+ L + G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 MLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
Length = 666
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 142/319 (44%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD ++ + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WNDMN+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G M R+ E D +K + +R+ IG RY W GDN S W H+ +++
Sbjct: 377 VHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
M+ L + G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 MLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 142/319 (44%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD ++ + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WNDMN+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G M R+ E D +K + +R+ IG RY W GDN S W H+ +++
Sbjct: 377 VHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
M+ L + G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 MLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
Length = 666
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 141/319 (44%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD ++ + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WNDMN+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G M R+ E D +K + +R+ IG RY W G N S W H+ +++
Sbjct: 377 VHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
M+ L + G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 MLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 666
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 141/319 (44%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD ++ + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WN MN+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNAMNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G M R+ E D +K + +R+ IG RY W GDN S W H+ +++
Sbjct: 377 VHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
M+ L + G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 MLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
pdb|3N04|B Chain B, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 136/319 (42%), Gaps = 45/319 (14%)
Query: 176 FHDFHVQSGNIIHIICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPK 235
F DF V N FPD + + I ++D G+K E GY VY+ G K
Sbjct: 207 FKDFTVNEKN----------FPDFPEFVKEXKDQELRLIPIIDAGVKVEKGYEVYEEGVK 256
Query: 236 IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAA 295
+ + ++ DG+ F+ VWPG FPD + R W+ R + G++G WND N+PA
Sbjct: 257 NNYFCKREDGSDFVAAVWPGDTHFPDXLNPEARKWFGDKYRFLIDQGIEGFWNDXNEPAI 316
Query: 296 FKSVTKTMP------------ERNIH-------------------RGLDEIGGCQ-NHLS 323
F S E IH R + G + H
Sbjct: 317 FYSSEGLAEAKEFAGEFAKDTEGKIHPWAXQAKXKDIVNSPEDYKRFYHNVNGKKIRHDK 376
Query: 324 YHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSIS 383
HN++G R+ E D +K +R+ IG RY W GDN S W H+ +++
Sbjct: 377 VHNLFGYNXTRAAGEAFERIDPEKRFLXFSRSSYIGXHRYGGIWXGDNKSWWSHILLNLK 436
Query: 384 MVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFG- 442
+ L G ++G D+GGF + T L R++ + P R H+ T + E F
Sbjct: 437 XLPSLNXCGFXYTGADLGGFGDDTTRDLLLRFLALGVFTPLXRDHAAEGTREQECYQFEN 496
Query: 443 -EEPASVLSSRPSGMIPFL 460
E+ SV+++R ++P+L
Sbjct: 497 IEDFRSVINARYR-LVPYL 514
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 204/512 (39%), Gaps = 122/512 (23%)
Query: 62 LYGTGEVSGQLERTGKRIFTWNTDSWGYGTG------TTSLYQSHPWVLAVLPSGEALGV 115
LYG GE R+ +R W+T WG + + Y HP+ + + G A GV
Sbjct: 180 LYGFGETE---HRSYRRDLEWHT--WGMFSRDQPPGYKKNSYGVHPYYMGLEEDGSAHGV 234
Query: 116 LADTTRRCEGFLIDLGKESTIQFIAPSSYP----VITFGLFTSPTAVLVSLSH------- 164
L L + T Q + +Y V+ F +F PT LV+ +
Sbjct: 235 L---------LLNSNAMDVTFQPLPALTYRTTGGVLDFYVFLGPTPELVTQQYTELIGRP 285
Query: 165 ------AVDNFLCH---------SSLFHD-------FHVQSGNIIHIICSFEHFPDPK-- 200
++ LC +SL+ + + VQ +I ++ + PK
Sbjct: 286 VMVPYWSLGFQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSPKFA 345
Query: 201 ---SLATDLHLNGFKAIWMLDPGIKHEDG--YFVYDSGPKIDVWIRKP-DGTPFIGEVWP 254
+L + +G + I +LDP I + Y + G + DV+I+ P DG G+VWP
Sbjct: 346 GFPALINRMKADGMRVILILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWP 405
Query: 255 ---------------------GPCAFPDYTQSKVRSWWASLVRDFVYN--------GVDG 285
AFPD+ ++ WW + + N DG
Sbjct: 406 DFPDVVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDG 465
Query: 286 IWNDMNKPAAF---------KSVTKTMPERNIH-----RGLDEIGGCQ------------ 319
+W DMN+P++F + + P H RGL C
Sbjct: 466 MWIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPDGSLV 525
Query: 320 NHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLH 379
H + HN+YG R TYE ++ + V+TR+ S R+A W GDN + W+ L
Sbjct: 526 QHYNVHNLYGWSQTRPTYEAVQEVTGQRG-VVITRSTFPSSGRWAGHWLGDNTAAWDQLK 584
Query: 380 MSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPR 439
SI +++ L G ++G DI GF +A + RWM + A +PF R H+ T +P
Sbjct: 585 KSIIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPV 644
Query: 440 S----FGEEPASVLSSRPSGMIPFLNILLYNC 467
S F +VL +R + ++P+L L++
Sbjct: 645 SWDVAFVNISRTVLQTRYT-LLPYLYTLMHKA 675
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In
Glycoside Hydrolase Family 31
pdb|4B9Z|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With Acarbose
pdb|4BA0|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With 5f-alpha-glcf
Length = 817
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 181/461 (39%), Gaps = 69/461 (14%)
Query: 59 GTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEALGVLAD 118
G + G G+ ++R G+R +N +GY + +Y P A++ S + + V +
Sbjct: 151 GEKILGGGQRILGMDRRGQRFPLYNRAHYGYSDHSGQMYFGLP---AIMSSKQYILVFDN 207
Query: 119 TTR------RCEGFLIDL----GKESTIQFIAPSSYPVIT-------------------- 148
+ + E ++ L G+ + I +A +SYP +
Sbjct: 208 SASGAMDIGKTESDILQLEAKSGRSAYI-LVAGNSYPSLIENFTQVTGRQPLPPRWALGS 266
Query: 149 ----FGLFTSPTAVLVSLSHAVDNFLCHSSLFHDF---HVQSGNIIHIICSFEHFPDPKS 201
FG + + ++F + + + G++ ++ E+FP P
Sbjct: 267 FASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPTPLD 326
Query: 202 LATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPD 261
+ D G K + + +P + +D K + P G P E++ G D
Sbjct: 327 MMADFKQQGVKTVLITEPFVLTSSKR--WDDAVKAKALAKDPQGQPKAFELYFGNGGIID 384
Query: 262 YTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNH 321
+ W++S+ +D GV G W D+ +P + PE H IG
Sbjct: 385 VFSKEGSRWFSSIYKDLSKQGVAGWWGDLGEP-------EMHPEDTQH----AIGDAD-- 431
Query: 322 LSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAAT-WTGDNVSNWEHLHM 380
+ HN YG A Y+ + PF++ RAG +GSQRY WTGD W L
Sbjct: 432 -TVHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLAS 490
Query: 381 SISMVLQLGLSGQPHSGPDIGGFAGNAT--PRLFGRWMGIRAVFPFCRGHSETNTIDHEP 438
+ + LQ+ L G + D+GGFA T ++ RW+ P R H + + I EP
Sbjct: 491 QVELALQMSLLGFGYIHSDLGGFADGETLDKEMYIRWLQYGVFQPVYRPHGQ-DHIPSEP 549
Query: 439 RSFGEEPASVLSSRP-----SGMIPFLNILLYNCIALVGLP 474
EE ++L RP M+P++ Y L G+P
Sbjct: 550 VFQDEETKAIL--RPLVKLRYRMLPYIYTAAYQN-TLTGMP 587
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSK|A Chain A, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|B Chain B, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|C Chain C, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|D Chain D, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|E Chain E, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|F Chain F, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
Length = 778
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 174/450 (38%), Gaps = 71/450 (15%)
Query: 53 KLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEA 112
+L+ G ++YG GE L R G+ + TWN D GT T Y++ P+ + +
Sbjct: 153 RLDLGVGETVYGLGERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYM----TNRG 205
Query: 113 LGVLADTTRRCEGFLIDLGKESTIQFIAPSSY---------------------------- 144
GVL + + C F + K S +QF S Y
Sbjct: 206 YGVLVNHPQ-CVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALP 264
Query: 145 PVITFGLFTSPTAVLVSLSHAVDNF---LCHSSL-FHDFHVQSGNIIHII-CSFE----H 195
P +FGL+ + + V++F + +L H FH + C FE
Sbjct: 265 PAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLT 324
Query: 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPG 255
FPDP+ + L G K ++P I + V+ + +++PDG+ + + W
Sbjct: 325 FPDPEGMIRRLKAKGLKICVWINPYIGQKSP--VFKELQEKGYLLKRPDGSLWQWDKWQP 382
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK--PAAFKSVTKTMPERNIHRGLD 313
A D+T W+A ++ V GVD D + P + + P++
Sbjct: 383 GLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQK------- 435
Query: 314 EIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVS 373
HN Y + ++ ++ + R+ +G+Q++ W GD +
Sbjct: 436 ----------MHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 485
Query: 374 NWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNT 433
N+E + S+ L +GLSG DIGGF A ++ RW + R H +
Sbjct: 486 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSY 545
Query: 434 IDHEPRSFGEEPASVL---SSRPSGMIPFL 460
P ++ +E V+ + M+P+L
Sbjct: 546 --RVPWAYDDESCDVVRFFTQLKCRMMPYL 573
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|B Chain B, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|C Chain C, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|D Chain D, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|E Chain E, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|F Chain F, Structure Of The Yici Thiosugar Michaelis Complex
Length = 773
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 174/450 (38%), Gaps = 71/450 (15%)
Query: 53 KLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEA 112
+L+ G ++YG GE L R G+ + TWN D GT T Y++ P+ + +
Sbjct: 153 RLDLGVGETVYGLGERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYM----TNRG 205
Query: 113 LGVLADTTRRCEGFLIDLGKESTIQFIAPSSY---------------------------- 144
GVL + + C F + K S +QF S Y
Sbjct: 206 YGVLVNHPQ-CVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALP 264
Query: 145 PVITFGLFTSPTAVLVSLSHAVDNF---LCHSSL-FHDFHVQSGNIIHII-CSFE----H 195
P +FGL+ + + V++F + +L H FH + C FE
Sbjct: 265 PAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLT 324
Query: 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPG 255
FPDP+ + L G K ++P I + V+ + +++PDG+ + + W
Sbjct: 325 FPDPEGMIRRLKAKGLKICVWINPYIGQKSP--VFKELQEKGYLLKRPDGSLWQWDKWQP 382
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK--PAAFKSVTKTMPERNIHRGLD 313
A D+T W+A ++ V GVD D + P + + P++
Sbjct: 383 GLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQK------- 435
Query: 314 EIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVS 373
HN Y + ++ ++ + R+ +G+Q++ W GD +
Sbjct: 436 ----------MHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 485
Query: 374 NWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNT 433
N+E + S+ L +GLSG DIGGF A ++ RW + R H +
Sbjct: 486 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSY 545
Query: 434 IDHEPRSFGEEPASVL---SSRPSGMIPFL 460
P ++ +E V+ + M+P+L
Sbjct: 546 --RVPWAYDDESCDVVRFFTQLKCRMMPYL 573
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|B Chain B, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|C Chain C, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|D Chain D, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|E Chain E, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|F Chain F, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
Length = 772
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 156/415 (37%), Gaps = 66/415 (15%)
Query: 53 KLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEA 112
+L+ G ++YG GE L R G+ + TWN D GT T Y++ P+ +
Sbjct: 153 RLDLGVGETVYGLGERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYX----TNRG 205
Query: 113 LGVLADTTRRCEGFLIDLGKESTIQFIAPSSY---------------------------- 144
GVL + + C F + K S +QF S Y
Sbjct: 206 YGVLVNHPQ-CVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALP 264
Query: 145 PVITFGLFTSPTAVLVSLSHAVDNFL---CHSSL-FHDFHVQS-GNIIHIICSFE----H 195
P +FGL+ + + V++F+ +L H FH C FE
Sbjct: 265 PAWSFGLWLTTSFTTNYDEATVNSFIDGXAERNLPLHVFHFDCFWXKAFQWCDFEWDPLT 324
Query: 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPG 255
FPDP+ L G K ++P I + V+ + +++PDG+ + + W
Sbjct: 325 FPDPEGXIRRLKAKGLKICVWINPYIGQKSP--VFKELQEKGYLLKRPDGSLWQWDKWQP 382
Query: 256 PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK--PAAFKSVTKTMPERNIHRGLD 313
A D+T W+A ++ V GVD D + P + + P++
Sbjct: 383 GLAIYDFTNPDACKWYADKLKGLVAXGVDCFKTDFGERIPTDVQWFDGSDPQKX------ 436
Query: 314 EIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVS 373
HN Y + ++ ++ + R+ +G+Q++ W GD +
Sbjct: 437 -----------HNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 485
Query: 374 NWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGH 428
N+E S+ L +GLSG DIGGF A ++ RW + R H
Sbjct: 486 NYESXAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH 540
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2I|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2J|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
Length = 1027
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 39/209 (18%)
Query: 259 FPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPA----AFKSVTKTMPERNIHRGLDE 314
FPD+ + V WW + + G+D +W DM PA P+ N D
Sbjct: 512 FPDWGRPDVAEWWGNNYKKLFSIGLDFVWQDMTVPAMMPHKIGDDINVKPDGNWPNADDP 571
Query: 315 IGGCQNHLSYH----------------------NVYGMPMARSTYEGMRLADKD-----K 347
G N +YH N++ + ST + + + D +
Sbjct: 572 SNGQYNWKTYHPQVLVTDMRYENHGREPMVTQRNIHAYTLCESTRKEGIVENADTLTKFR 631
Query: 348 CPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAG-- 405
++++R G IG+Q + W GDN + ++ M I+ + + +S P G DIGGF
Sbjct: 632 RSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSDIGGFTSYD 691
Query: 406 NATPR------LFGRWMGIRAVFPFCRGH 428
N R L R++ + P+ R H
Sbjct: 692 NENQRTPCTGDLMVRYVQAGCLLPWFRNH 720
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus
pdb|2XVK|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With
5-Fluoro-Alpha-D-Xylopyranosyl Fluoride
pdb|2XVL|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With Pentaerythritol
Propoxylate (5 4 Po Oh)
Length = 1020
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 84/221 (38%), Gaps = 26/221 (11%)
Query: 194 EHFPDPKSLATDLH-LNGFKAIWMLDPGIKHEDGY---------FVYDSGPKIDVWIRKP 243
+ FPDPK+L +H +N I + D Y F + K WI K
Sbjct: 487 QFFPDPKALVDKVHAMNAQIMISVWPKFYPTTDNYKELNAKGFMFNRNLDEKNLDWIGKG 546
Query: 244 DGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTM 303
F P A +W + +G D W D +P ++T
Sbjct: 547 YLNAFYDPFSPEATAI----------FWKQIRDKINVHGFDAWWLDAVEPDIHSNLTFEK 596
Query: 304 PERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRY 363
+ L N N Y +P A Y+G D DK F+LTR+G G QR
Sbjct: 597 -----RKWLMTPNARGNGAEIFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRT 651
Query: 364 -AATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGF 403
+A W+GD VS W + I+ + L+G + DIGGF
Sbjct: 652 GSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDIGGF 692
>pdb|1GCY|A Chain A, High Resolution Crystal Structure Of Maltotetraose-Forming
Exo-Amylase
Length = 527
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 235 KIDVWIRKPDGTPF-IGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278
+++ W+ F +GE+W GP +P++ S W +++D+
Sbjct: 202 RVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTAS-WQQIIKDW 245
>pdb|1QI3|A Chain A, Mutant (D193n) Maltotetraose-Forming Exo-Amylase In
Complex With Maltotetraose
Length = 429
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 235 KIDVWIRKPDGTPF-IGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278
+++ W+ F +GE+W GP +P++ S W +++D+
Sbjct: 202 RVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTAS-WQQIIKDW 245
>pdb|1QI5|A Chain A, Mutant (D294n) Maltotetraose-Forming Exo-Amylase In
Complex With Maltotetraose
Length = 429
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 235 KIDVWIRKPDGTPF-IGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278
+++ W+ F +GE+W GP +P++ S W +++D+
Sbjct: 202 RVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTAS-WQQIIKDW 245
>pdb|1QPK|A Chain A, Mutant (D193g) Maltotetraose-Forming Exo-Amylase In
Complex With Maltotetraose
Length = 418
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 235 KIDVWIRKPDGTPF-IGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278
+++ W+ F +GE+W GP +P++ S W +++D+
Sbjct: 202 RVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTAS-WQQIIKDW 245
>pdb|2AMG|A Chain A, Structure Of Hydrolase (Glycosidase)
Length = 418
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 235 KIDVWIRKPDGTPF-IGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278
+++ W+ F +GE+W GP +P++ S W +++D+
Sbjct: 202 RVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTAS-WQQIIKDW 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,282,958
Number of Sequences: 62578
Number of extensions: 751479
Number of successful extensions: 1452
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1389
Number of HSP's gapped (non-prelim): 44
length of query: 475
length of database: 14,973,337
effective HSP length: 102
effective length of query: 373
effective length of database: 8,590,381
effective search space: 3204212113
effective search space used: 3204212113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)