Query 046216
Match_columns 475
No_of_seqs 239 out of 1677
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:50:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046216.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046216hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02763 hydrolase, hydrolyzin 100.0 3E-120 6E-125 994.6 45.2 471 1-475 15-521 (978)
2 KOG1066 Glucosidase II catalyt 100.0 7.7E-99 2E-103 772.8 27.7 413 49-475 208-690 (915)
3 PRK10658 putative alpha-glucos 100.0 9.4E-95 2E-99 783.0 38.8 392 51-475 150-586 (665)
4 COG1501 Alpha-glucosidases, fa 100.0 1.6E-92 3.6E-97 770.9 36.4 401 47-475 140-587 (772)
5 PRK10426 alpha-glucosidase; Pr 100.0 1.8E-90 3.8E-95 748.1 36.5 398 48-475 70-541 (635)
6 KOG1065 Maltase glucoamylase a 100.0 1.4E-87 3.1E-92 711.5 28.2 434 19-475 144-624 (805)
7 cd06604 GH31_glucosidase_II_Ma 100.0 2.4E-81 5.2E-86 635.8 25.8 305 164-472 9-339 (339)
8 cd06600 GH31_MGAM-like This fa 100.0 8.2E-81 1.8E-85 625.4 24.5 283 164-472 9-317 (317)
9 cd06603 GH31_GANC_GANAB_alpha 100.0 1.9E-80 4E-85 629.0 25.3 302 164-472 9-339 (339)
10 cd06602 GH31_MGAM_SI_GAA This 100.0 1.8E-78 4E-83 613.0 24.9 285 164-475 9-324 (339)
11 PF01055 Glyco_hydro_31: Glyco 100.0 7.5E-75 1.6E-79 609.6 23.1 319 147-475 2-358 (441)
12 cd06601 GH31_lyase_GLase GLase 100.0 4.3E-71 9.2E-76 555.1 22.2 264 164-454 9-332 (332)
13 cd06598 GH31_transferase_CtsZ 100.0 5.9E-71 1.3E-75 554.4 21.4 274 164-454 9-317 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 1.7E-69 3.6E-74 543.0 21.6 272 164-456 9-308 (308)
15 cd06591 GH31_xylosidase_XylS X 100.0 8.4E-69 1.8E-73 539.2 21.9 274 164-449 9-318 (319)
16 cd06599 GH31_glycosidase_Aec37 100.0 1.3E-68 2.8E-73 537.4 21.1 271 164-446 9-314 (317)
17 cd06597 GH31_transferase_CtsY 100.0 1.9E-67 4.2E-72 532.4 20.9 268 164-447 9-332 (340)
18 cd06594 GH31_glucosidase_YihQ 100.0 2.6E-67 5.6E-72 527.0 19.5 267 164-448 9-315 (317)
19 cd06595 GH31_xylosidase_XylS-l 100.0 5.9E-61 1.3E-65 476.6 19.6 247 164-449 10-291 (292)
20 cd06589 GH31 The enzymes of gl 100.0 8E-58 1.7E-62 448.6 19.2 229 164-448 9-263 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 1.7E-57 3.8E-62 454.0 17.5 228 189-449 62-302 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 2E-44 4.3E-49 341.8 14.2 133 327-461 126-261 (261)
23 PF13802 Gal_mutarotas_2: Gala 99.7 4.6E-17 9.9E-22 126.2 7.1 67 59-129 1-68 (68)
24 PF02065 Melibiase: Melibiase; 98.6 3.2E-07 7E-12 94.6 12.8 95 192-293 98-194 (394)
25 PLN03231 putative alpha-galact 98.3 2.4E-05 5.1E-10 79.3 15.0 159 192-385 75-255 (357)
26 PLN02899 alpha-galactosidase 98.0 0.00023 4.9E-09 76.1 16.0 155 192-385 102-286 (633)
27 PLN02692 alpha-galactosidase 97.2 0.0048 1E-07 63.8 12.8 124 192-385 115-247 (412)
28 PLN02229 alpha-galactosidase 97.1 0.0053 1.2E-07 63.7 12.6 123 192-385 122-253 (427)
29 PLN02808 alpha-galactosidase 96.9 0.014 3E-07 60.1 13.1 124 192-385 91-223 (386)
30 PF14871 GHL6: Hypothetical gl 96.9 0.0041 8.8E-08 54.5 7.8 85 199-290 46-132 (132)
31 COG3345 GalA Alpha-galactosida 96.2 0.0073 1.6E-07 63.5 5.3 132 153-291 265-443 (687)
32 PF00128 Alpha-amylase: Alpha 95.3 0.041 8.9E-07 54.3 6.8 95 198-292 53-171 (316)
33 PRK03705 glycogen debranching 95.3 0.077 1.7E-06 58.8 9.4 91 198-291 243-338 (658)
34 PRK14510 putative bifunctional 94.9 0.09 1.9E-06 62.2 9.1 93 198-291 248-344 (1221)
35 TIGR02456 treS_nterm trehalose 94.8 0.091 2E-06 57.1 8.2 92 198-291 77-199 (539)
36 TIGR02104 pulA_typeI pullulana 94.6 0.14 3E-06 56.4 9.3 89 198-291 230-321 (605)
37 TIGR02100 glgX_debranch glycog 94.5 0.17 3.7E-06 56.5 9.4 92 198-292 246-344 (688)
38 PRK10785 maltodextrin glucosid 94.4 0.13 2.8E-06 56.7 8.3 89 198-291 227-337 (598)
39 PF13200 DUF4015: Putative gly 93.7 0.3 6.5E-06 49.1 8.5 87 196-291 60-146 (316)
40 TIGR01515 branching_enzym alph 93.6 0.25 5.4E-06 54.5 8.6 92 194-291 200-297 (613)
41 COG1523 PulA Type II secretory 93.3 0.35 7.6E-06 53.7 9.0 94 195-292 263-362 (697)
42 KOG2366 Alpha-D-galactosidase 93.3 0.46 9.9E-06 48.2 8.9 155 192-421 102-281 (414)
43 TIGR02102 pullulan_Gpos pullul 92.9 0.39 8.5E-06 56.0 9.1 86 198-291 556-644 (1111)
44 PF02638 DUF187: Glycosyl hydr 92.9 0.4 8.7E-06 48.3 8.1 89 199-289 72-161 (311)
45 PLN02447 1,4-alpha-glucan-bran 92.7 0.31 6.8E-06 54.5 7.6 93 194-292 294-393 (758)
46 PRK10933 trehalose-6-phosphate 92.7 0.46 1E-05 51.7 8.8 34 259-292 170-203 (551)
47 TIGR01370 cysRS possible cyste 92.3 0.27 5.9E-06 49.4 6.0 83 200-292 84-170 (315)
48 PLN03244 alpha-amylase; Provis 92.3 0.42 9.1E-06 53.2 7.8 87 199-291 443-533 (872)
49 TIGR02402 trehalose_TreZ malto 92.2 0.41 8.9E-06 52.0 7.7 80 198-291 161-246 (542)
50 PRK12313 glycogen branching en 91.9 0.56 1.2E-05 52.1 8.5 88 198-292 221-312 (633)
51 TIGR02403 trehalose_treC alpha 91.8 0.6 1.3E-05 50.8 8.5 93 198-292 76-196 (543)
52 PLN00196 alpha-amylase; Provis 91.8 0.79 1.7E-05 48.3 9.1 100 191-291 83-205 (428)
53 PRK14706 glycogen branching en 91.5 0.59 1.3E-05 51.8 8.0 92 194-291 211-308 (639)
54 PLN02960 alpha-amylase 91.4 0.64 1.4E-05 52.6 8.1 87 199-291 468-558 (897)
55 COG1649 Uncharacterized protei 91.1 0.48 1E-05 49.3 6.3 90 199-291 117-208 (418)
56 PRK09441 cytoplasmic alpha-amy 91.0 1 2.2E-05 48.2 9.1 33 260-292 203-236 (479)
57 TIGR02103 pullul_strch alpha-1 90.8 0.86 1.9E-05 52.2 8.6 89 198-291 405-498 (898)
58 PRK14705 glycogen branching en 89.5 0.96 2.1E-05 53.4 7.8 92 194-291 809-906 (1224)
59 COG0366 AmyA Glycosidases [Car 89.4 1.3 2.8E-05 47.2 8.3 32 260-291 169-200 (505)
60 PRK05402 glycogen branching en 89.2 1.6 3.5E-05 49.2 9.1 87 198-291 316-406 (726)
61 PRK12568 glycogen branching en 88.8 1.6 3.4E-05 48.9 8.5 92 194-291 313-410 (730)
62 PLN02361 alpha-amylase 88.8 2.3 5E-05 44.4 9.3 33 260-292 149-182 (401)
63 PLN02877 alpha-amylase/limit d 88.2 2.1 4.6E-05 49.2 9.2 90 198-292 467-562 (970)
64 PLN02784 alpha-amylase 87.1 2.7 5.9E-05 47.6 9.0 33 259-291 642-675 (894)
65 KOG0470 1,4-alpha-glucan branc 86.6 1.5 3.3E-05 48.2 6.5 93 194-292 308-405 (757)
66 PF13199 Glyco_hydro_66: Glyco 84.2 2.6 5.7E-05 45.8 7.0 89 199-290 172-266 (559)
67 COG2342 Predicted extracellula 83.3 3.9 8.4E-05 40.1 6.9 92 193-293 56-150 (300)
68 PF14885 GHL15: Hypothetical g 82.9 2.7 5.8E-05 33.3 4.8 56 234-291 17-76 (79)
69 PRK09505 malS alpha-amylase; R 82.8 3.7 7.9E-05 45.9 7.6 29 264-292 435-464 (683)
70 KOG0471 Alpha-amylase [Carbohy 82.7 4.7 0.0001 43.9 8.3 34 259-292 182-216 (545)
71 PLN02355 probable galactinol-- 81.9 16 0.00035 40.8 11.9 28 264-291 368-396 (758)
72 PF01120 Alpha_L_fucos: Alpha- 76.1 10 0.00022 38.8 7.9 25 192-217 87-111 (346)
73 COG0296 GlgB 1,4-alpha-glucan 72.4 16 0.00036 40.2 8.6 90 193-291 207-305 (628)
74 smart00812 Alpha_L_fucos Alpha 60.6 7.9 0.00017 40.2 3.3 28 266-293 173-204 (384)
75 PF13653 GDPD_2: Glycerophosph 47.8 16 0.00035 23.2 2.0 17 274-290 12-28 (30)
76 PF10766 DUF2592: Protein of u 41.9 2.5 5.4E-05 28.4 -2.5 18 61-78 22-39 (41)
77 PRK13840 sucrose phosphorylase 41.0 31 0.00068 37.0 4.1 32 260-291 164-195 (495)
78 PF02449 Glyco_hydro_42: Beta- 37.8 74 0.0016 32.7 6.2 90 196-295 46-140 (374)
79 PF05691 Raffinose_syn: Raffin 34.4 2E+02 0.0043 32.6 9.0 28 264-291 362-390 (747)
80 PRK14582 pgaB outer membrane N 32.1 1.2E+02 0.0026 33.9 7.0 74 206-290 390-466 (671)
81 TIGR03852 sucrose_gtfA sucrose 30.2 64 0.0014 34.5 4.3 33 259-291 159-191 (470)
82 PLN02711 Probable galactinol-- 30.1 2.5E+02 0.0054 31.8 8.8 49 362-413 495-548 (777)
83 cd06542 GH18_EndoS-like Endo-b 30.0 1.6E+02 0.0036 28.2 6.9 59 199-290 53-112 (255)
84 TIGR02455 TreS_stutzeri trehal 29.4 1.7E+02 0.0037 32.6 7.3 32 260-291 262-296 (688)
85 PF05748 Rubella_E1: Rubella m 23.1 60 0.0013 31.6 2.3 26 153-178 213-238 (496)
86 PLN02635 disproportionating en 23.0 98 0.0021 33.7 4.2 77 199-279 226-314 (538)
87 PF03537 Glyco_hydro_114: Glyc 22.3 98 0.0021 24.0 3.0 24 197-220 36-59 (74)
88 PRK14508 4-alpha-glucanotransf 21.7 1.2E+02 0.0025 32.9 4.3 77 199-279 200-288 (497)
89 TIGR00217 malQ 4-alpha-glucano 21.0 78 0.0017 34.3 2.9 91 199-293 214-327 (513)
90 cd08613 GDPD_GDE4_like_1 Glyce 20.2 1.4E+02 0.0031 30.0 4.4 18 199-216 253-270 (309)
No 1
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=2.7e-120 Score=994.57 Aligned_cols=471 Identities=68% Similarity=1.191 Sum_probs=447.2
Q ss_pred CeeeccCCccchhccCCceEEEeCCCCccccccCCCCcccceeeeecCeEEEEEEecCCCeeeccccccCCcccCCceeE
Q 046216 1 RCFRFDCAASDRQAAYPSLSFVNGKDRDTPVSTHMRPLYTPIYRCVHGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIF 80 (475)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~t~~~~~~~p~~~~~~~~~~~~~~l~~~e~~YGlGE~~~~l~~~G~~~~ 80 (475)
.||||||++.+|.+|+||+||+.++.+|.++.+++.|.++|.|++.++.|.+.++++++|++|||||+.++|+++|+++.
T Consensus 15 ~~~~f~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~~e~~YGlGE~~g~L~rrG~~~~ 94 (978)
T PLN02763 15 GVFRFDCSEDARKAAFPSLSFKNPKLREEPIESHNVPAFIPTFECDGDQQIVTFELPSGTSFYGTGEVSGPLERTGKRVY 94 (978)
T ss_pred ceEEEcCchhhhhccCCceeecCcccccccCcCCCcccccceEEeeCCEEEEEEEcCCCCeEEeCCccCCccccCCcEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCCCCCCCCccceeEEEEEcCCCceEEEEeCCCCCeeeEEEEecCceeEEEEecCCccEEEEccCCCHHHHHH
Q 046216 81 TWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEALGVLADTTRRCEGFLIDLGKESTIQFIAPSSYPVITFGLFTSPTAVLV 160 (475)
Q Consensus 81 ~wn~D~~~~~~~~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~~~~~~id~~~~~~~~~~~~~~~~~i~~Gp~~tp~~vi~ 160 (475)
+||+|+++|++++++||++|||||++++++.+||||+||+++++ ||++.+..+.|.++.+|++|++||+++|++|++
T Consensus 95 lwN~D~~gy~~~~~~LY~siPf~l~~~~~g~~yGVf~dns~~~~---fDlg~~~~~~f~a~~~y~~i~~G~gptp~eVi~ 171 (978)
T PLN02763 95 TWNTDAWGYGQNTTSLYQSHPWVFVVLPNGEALGVLADTTRRCE---IDLRKESIIRIIAPASYPVITFGPFPSPEALLT 171 (978)
T ss_pred EEECCCCccCCCCCcccccEeEEEEEecCCcEEEEEEeCCCcEE---EEEcCCceEEEEecCceEEEEecCCCCHHHHHH
Confidence 99999999988889999999999998877789999999999999 999988877888888888777898789999999
Q ss_pred HHHHhhccc-----------cccccCCCccceee-------c----eeEe-----------eccCCCCCCChHHHHHHHH
Q 046216 161 SLSHAVDNF-----------LCHSSLFHDFHVQS-------G----NIIH-----------IICSFEHFPDPKSLATDLH 207 (475)
Q Consensus 161 ~y~~l~G~~-----------~~rw~Y~~~~~v~e-------~----D~~W-----------f~~~~~~fPdp~~~v~~L~ 207 (475)
+|+++||++ ||||+|.++++|++ + |+|| |+||+++||||++|+++||
T Consensus 172 ~Yt~LTGrp~mpP~WALGy~qSR~~Y~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~~mv~~Lh 251 (978)
T PLN02763 172 SLSHAIGTVFMPPKWALGYQQCRWSYESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLH 251 (978)
T ss_pred HHHHHhCCCCCCchHHhheeeccCCCCCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccCCCHHHHHHHHH
Confidence 999999874 59999999998885 1 8888 4568999999999999999
Q ss_pred HCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEE
Q 046216 208 LNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIW 287 (475)
Q Consensus 208 ~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w 287 (475)
++|+|+++++||+|+.+++|.+|++|.++++|||+++|++|+|.+|||.++|||||||+|++||.++++.+++.||||||
T Consensus 252 ~~G~kvv~iidPgI~~d~gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W 331 (978)
T PLN02763 252 SIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIW 331 (978)
T ss_pred HCCCEEEEEEcCCCccCCCCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEE
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceee
Q 046216 288 NDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATW 367 (475)
Q Consensus 288 ~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W 367 (475)
+|||||++|+...+++|.+..|.+....|+..+|.++||+||++|+||+||++++..+++|||++|||+|+|+|||+++|
T Consensus 332 ~DmnEPa~f~~~~~t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSgfaGsQRYaa~W 411 (978)
T PLN02763 332 NDMNEPAVFKTVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGSQRYAATW 411 (978)
T ss_pred ccCCCCccccCCcCCCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccccCcCCCCceEE
Confidence 99999999988778899999998876556666799999999999999999999998889999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHH
Q 046216 368 TGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPAS 447 (475)
Q Consensus 368 ~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~ 447 (475)
+|||.++|++|+.+|+++||+||||+||||+|||||.|++++|||+||+|+|||+|+||+|+..++.+||||.|++++++
T Consensus 412 tGDn~SsWe~L~~sI~~~LnlgLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~ 491 (978)
T PLN02763 412 TGDNLSNWEHLHMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEE 491 (978)
T ss_pred CCCccCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999988
Q ss_pred HH---HHHhhhhHHHHHHHHHHHHhccCccC
Q 046216 448 VL---SSRPSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 448 i~---i~lRy~LlPYiYsl~~~a~~~tG~Pi 475 (475)
++ |++||+|||||||++++||+ +|+||
T Consensus 492 i~R~ai~LRYrLLPYiYSL~~eA~~-tG~PI 521 (978)
T PLN02763 492 VCRLALKRRYRLLPHFYTLFYKAHT-TGLPV 521 (978)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hCCce
Confidence 76 99999999999999999998 99997
No 2
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.7e-99 Score=772.77 Aligned_cols=413 Identities=32% Similarity=0.604 Sum_probs=372.8
Q ss_pred eEEEEEEecCCCeeeccccccCCcccC-----CceeEEeecCCCCCCCC-CCCCccceeEEEEEcCCCceEEEEeCCCCC
Q 046216 49 QQIVKLEFPAGTSLYGTGEVSGQLERT-----GKRIFTWNTDSWGYGTG-TTSLYQSHPWVLAVLPSGEALGVLADTTRR 122 (475)
Q Consensus 49 ~~~~~~~l~~~e~~YGlGE~~~~l~~~-----G~~~~~wn~D~~~~~~~-~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~ 122 (475)
...+.|++..-.++||+-||.+++.++ ...++|+|.|.++|..+ ...||+++||++++.++ +..|+|+.|...
T Consensus 208 SVglD~sF~~~~~vyGIPEHA~s~~Lk~T~g~~ePYRLyNlDVFEYe~~spmalYGSIP~m~ah~~~-r~~g~fW~NAAe 286 (915)
T KOG1066|consen 208 SVGLDFSFVGSKNVYGIPEHADSLRLKDTSGGSEPYRLYNLDVFEYELNSPMALYGSIPFMLAHGPN-RDVGIFWLNAAE 286 (915)
T ss_pred eeEEeEEecccceeecCcccccceEeeccCCCCCceeEeecceEEEecCCcchheecccEEEecCCC-CceeeEEecchh
Confidence 445667888888999999999988753 24589999999999775 46899999999998765 678999999999
Q ss_pred eeeEEEEecCcee---------------------EEEEecCCcc--EEEEccCCCHHHHHHHHHHhhcc-----------
Q 046216 123 CEGFLIDLGKEST---------------------IQFIAPSSYP--VITFGLFTSPTAVLVSLSHAVDN----------- 168 (475)
Q Consensus 123 ~~~~~id~~~~~~---------------------~~~~~~~~~~--~i~~Gp~~tp~~vi~~y~~l~G~----------- 168 (475)
+. ||+..+.. ..|.+|.+.. +|++|| +|.+|++||++|||+
T Consensus 287 TW---VDi~~~t~~~~~s~~~~~~~~s~~~p~~~thw~SEsGiiDvFi~lGP--~~~Dv~~qyaaLTG~~~LPplFsiGY 361 (915)
T KOG1066|consen 287 TW---VDIQSSTTDGLFSKMVDPVSGSQKVPQTDTHWMSESGIIDVFIFLGP--KPSDVFRQYAALTGTTPLPPLFSIGY 361 (915)
T ss_pred he---EEeeccccccccccccccCCCCCCCCCccceeeccCCcEEEEEEeCC--ChhHHHHHHHhhcCCCCCCchhhcch
Confidence 88 88764321 2344554332 356786 999999999999874
Q ss_pred ccccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCccccCCC
Q 046216 169 FLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDG 226 (475)
Q Consensus 169 ~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~ 226 (475)
|||||.|.++++|++. |+|| |+||+.+||+|+.|+++|.++|.|+|+||||+|+.+++
T Consensus 362 HQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdgKrYFTWDk~~FP~P~~Ml~kLa~kgRklV~IvDPHIKkD~~ 441 (915)
T KOG1066|consen 362 HQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDGKRYFTWDKHKFPNPKDMLKKLASKGRKLVTIVDPHIKKDDG 441 (915)
T ss_pred hhccccccchhhhhhhhcCccccCCccceEEEeeeecCCceeEeeccccCCCHHHHHHHHHhcCCceEEEeCcccccCCC
Confidence 6899999999999862 9999 78899999999999999999999999999999999999
Q ss_pred ccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhh-CCc---cEEEecCCCCCCCCCCCCC
Q 046216 227 YFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVY-NGV---DGIWNDMNKPAAFKSVTKT 302 (475)
Q Consensus 227 y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~-~G~---dg~w~D~~E~~~f~~~~~~ 302 (475)
|.++++++.+||+||+.+|+.|.|.||||.+.+|||+||++|+||++++. |-+ .|. =.+|+|||||++|+.++.|
T Consensus 442 Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP~~r~wW~~~fa-fd~y~g~t~nl~iWNDMNEPSVFnGPEiT 520 (915)
T KOG1066|consen 442 YFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINPEARKWWKSQFA-FDRYEGSTPNLFIWNDMNEPSVFNGPEIT 520 (915)
T ss_pred eEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCHHHHHHHhhhcc-cccccCCCCceEEeccCCCccccCCCccc
Confidence 99999999999999999999999999999999999999999999999987 322 332 2699999999999999999
Q ss_pred CCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcC-CCCcEEEecccccCCCCcceeeCCCCCCChhHHHHH
Q 046216 303 MPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADK-DKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMS 381 (475)
Q Consensus 303 ~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~-~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~~ 381 (475)
||.+++|.|.. .|+++||+||++...||++||+++.+ ++||||||||.|||+||++++|+|||.++|++||.|
T Consensus 521 m~kDaiHyGg~------EHRdVHNiYG~~~h~aT~dGl~~R~~g~~RPFvLsRafFaGsQR~aAiWTGDN~A~W~HLkiS 594 (915)
T KOG1066|consen 521 MPKDAIHYGGW------EHRDVHNIYGLMVHMATFDGLIARSGGKERPFVLSRAFFAGSQRTAAIWTGDNTADWDHLKIS 594 (915)
T ss_pred cchhhhhcCCe------eechhhhhhceeeeehhhhhhhhhcCCCcCceEEEeccccCccceeeeeccCCccchhhheee
Confidence 99999999874 58999999999999999999998865 689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhHH
Q 046216 382 ISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMIP 458 (475)
Q Consensus 382 I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~LlP 458 (475)
|||+|++|++|+||+|+|||||+|||++||++||+|.|||+||||.|+...+..||||.|++.+.+|. |+.||+|||
T Consensus 595 iPM~Lsl~iaG~~F~GADVgGFFgNPd~ELlvRWYQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP 674 (915)
T KOG1066|consen 595 IPMVLSLGIAGMPFVGADVGGFFGNPDPELLVRWYQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALLP 674 (915)
T ss_pred cceeEecccccceecccccccccCCCCHHHHHHHHHhcccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988876 999999999
Q ss_pred HHHHHHHHHHhccCccC
Q 046216 459 FLNILLYNCIALVGLPA 475 (475)
Q Consensus 459 YiYsl~~~a~~~tG~Pi 475 (475)
|+||+++++|. ||.||
T Consensus 675 ~wYTlFye~~~-tG~Pv 690 (915)
T KOG1066|consen 675 YWYTLFYEHHV-TGVPV 690 (915)
T ss_pred HHHHHHHHhhc-cCCCc
Confidence 99999999997 99997
No 3
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=9.4e-95 Score=782.97 Aligned_cols=392 Identities=23% Similarity=0.427 Sum_probs=348.2
Q ss_pred EEEEEecCCCeeeccccccCCcccCCceeEEeecCCCCCCCCCCCCccceeEEEEEcCCCceEEEEeCCCCCeeeEEEEe
Q 046216 51 IVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTGTTSLYQSHPWVLAVLPSGEALGVLADTTRRCEGFLIDL 130 (475)
Q Consensus 51 ~~~~~l~~~e~~YGlGE~~~~l~~~G~~~~~wn~D~~~~~~~~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~~~~~~id~ 130 (475)
..++.++++|++|||||+.+.|+++|+++.+||+|.. ..++++|++||||++ +++||||+||+..++ +|+
T Consensus 150 ~~~~~l~~~E~~yGlGE~~~~l~~~G~~~~~wn~D~~---~~~~~~Y~~iPf~~s----~~gyGvf~dn~~~~~---fd~ 219 (665)
T PRK10658 150 REQLDLGVGETVYGLGERFTAFVKNGQTVDIWNRDGG---TSSEQAYKNIPFYLT----NRGYGVFVNHPQCVS---FEV 219 (665)
T ss_pred EEEEecCCCCeEECCCccCCccccCCcEEEEEECCCC---CCCccccccccEEEe----cCcEEEEEcCCCceE---EEE
Confidence 4467899999999999999999999999999999962 456799999999999 679999999999999 999
Q ss_pred cCce--eEEEEecC---CccEEEEccCCCHHHHHHHHHHhhcccc--ccccCC-----------Cccceee-------c-
Q 046216 131 GKES--TIQFIAPS---SYPVITFGLFTSPTAVLVSLSHAVDNFL--CHSSLF-----------HDFHVQS-------G- 184 (475)
Q Consensus 131 ~~~~--~~~~~~~~---~~~~i~~Gp~~tp~~vi~~y~~l~G~~~--~rw~Y~-----------~~~~v~e-------~- 184 (475)
+.+. .+++.+++ +|+ |+.|| +|++|+++|+++||+++ |+|++. ++++|++ +
T Consensus 220 g~~~~~~~~~~~~g~~ldyy-~~~G~--tp~~v~~~Yt~LTGrp~lpP~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~ 296 (665)
T PRK10658 220 GSEKVSKVQFSVEGEYLEYF-VIDGP--TPKEVLDRYTALTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERD 296 (665)
T ss_pred ecCccceEEEEecCCcEEEE-EEeCC--CHHHHHHHHHHHhCCCCCCchhhhheeeecccccCCCHHHHHHHHHHHHHcC
Confidence 8764 35566554 554 45675 99999999999999975 666432 3445653 1
Q ss_pred ---eeEe-------------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCe
Q 046216 185 ---NIIH-------------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPF 248 (475)
Q Consensus 185 ---D~~W-------------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~ 248 (475)
|+|| |+||+++||||++|+++||++|+|+++||+|+|+.+ ++.|++|.++|+|||+++|+++
T Consensus 297 iP~d~i~lD~~w~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~i~P~i~~~--s~~f~e~~~~gy~vk~~~G~~~ 374 (665)
T PRK10658 297 LPLHVFHFDCFWMKEFQWCDFEWDPRTFPDPEGMLKRLKAKGLKICVWINPYIAQK--SPLFKEGKEKGYLLKRPDGSVW 374 (665)
T ss_pred CCceEEEEchhhhcCCceeeeEEChhhCCCHHHHHHHHHHCCCEEEEeccCCcCCC--chHHHHHHHCCeEEECCCCCEe
Confidence 6654 445799999999999999999999999999999875 4689999999999999999999
Q ss_pred eeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccc
Q 046216 249 IGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVY 328 (475)
Q Consensus 249 ~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y 328 (475)
++.+|+|.+++||||||+|++||.+++++++++||||||+|++|+. |.+..+... ..+.++||+|
T Consensus 375 ~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d~Gvdgfw~D~gE~~---------p~d~~~~~G------~~~~~~hN~Y 439 (665)
T PRK10658 375 QWDKWQPGMAIVDFTNPDACKWYADKLKGLLDMGVDCFKTDFGERI---------PTDVVWFDG------SDPQKMHNYY 439 (665)
T ss_pred eeeecCCCceeecCCCHHHHHHHHHHHHHHHhcCCcEEEecCCcee---------eccceecCC------CcHHHhcchh
Confidence 9999999999999999999999999999999999999999999963 444433321 1467899999
Q ss_pred cchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCCCC
Q 046216 329 GMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNAT 408 (475)
Q Consensus 329 ~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~ 408 (475)
+++|+||+||++++..+++|||+++||+++|+|||+++|+|||.|+|++|+.+|+++||+||||+||||+|||||.|.++
T Consensus 440 ~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGsQry~~~WsGD~~stw~~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~ 519 (665)
T PRK10658 440 TYLYNKTVFDVLKETRGEGEAVLFARSATVGGQQFPVHWGGDCYSNYESMAESLRGGLSLGLSGFGFWSHDIGGFENTAT 519 (665)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEecccCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHhcCCccccCccCCCCCCCC
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhHHHHHHHHHHHHhccCccC
Q 046216 409 PRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 409 ~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~LlPYiYsl~~~a~~~tG~Pi 475 (475)
+|||+||+|+|+|+|+||+|+.. ..||||.|++++.+++ ++|||+|||||||++++||+ +|+||
T Consensus 520 ~ELy~RW~Q~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i~lRy~LlPYlYs~~~~a~~-~G~Pi 586 (665)
T PRK10658 520 ADVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFTKLKCRLMPYLYREAAEAHE-RGTPM 586 (665)
T ss_pred HHHHHHHHHhcccChhhcccCCC--CCcCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCcc
Confidence 99999999999999999999874 4699999999998887 99999999999999999998 99997
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-92 Score=770.90 Aligned_cols=401 Identities=34% Similarity=0.650 Sum_probs=359.0
Q ss_pred cCeEEEEEEecCCCeeeccccccCCcccCCceeEEeecCCCCCC-CCCCCCccceeEEEEEcCCCceEEEEeCCCCCeee
Q 046216 47 HGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYG-TGTTSLYQSHPWVLAVLPSGEALGVLADTTRRCEG 125 (475)
Q Consensus 47 ~~~~~~~~~l~~~e~~YGlGE~~~~l~~~G~~~~~wn~D~~~~~-~~~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~~~~ 125 (475)
++....+|++.++|++|||||++.++++.++.+.+||.|+.++. ...++||.++||+++ +.+||+|++|+..+.
T Consensus 140 ~~~~~~~~~~~~~e~~yGlge~~~~l~~~~~~~~~wn~D~~~~~~~~~~~~y~~iPf~~s----~~gyg~~~~n~~~~~- 214 (772)
T COG1501 140 GGYVFLYFDLGGGEHVYGLGERAGGLGRNGQTYRLWNADAGTYTGGDYDNLYASIPFYLS----SRGYGLFVDNSAYGS- 214 (772)
T ss_pred CccEEEEEEecCCceEeeccccccccccCcceEEeeecCCCcccccccccccccCCEEEE----ccceEEEEECCCceE-
Confidence 35677788999999999999999999999999999999998875 357899999999999 479999999999999
Q ss_pred EEEEecCcee--EEEEec---CCccEEEEccCCCHHHHHHHHHHhhcccc--ccccCC----------Cccceee-----
Q 046216 126 FLIDLGKEST--IQFIAP---SSYPVITFGLFTSPTAVLVSLSHAVDNFL--CHSSLF----------HDFHVQS----- 183 (475)
Q Consensus 126 ~~id~~~~~~--~~~~~~---~~~~~i~~Gp~~tp~~vi~~y~~l~G~~~--~rw~Y~----------~~~~v~e----- 183 (475)
||++.+.. ..+.++ .+|+ ++.|| +|++|+++|+++||+++ |+|++. ++++|.+
T Consensus 215 --fd~~~~~~~~~~~~~e~~~ldyy-v~~G~--~~~~vi~~yt~lTGkp~l~P~Wa~G~~~~~~~~~~~e~~v~~~i~~~ 289 (772)
T COG1501 215 --FDVGSEEYSYVQFSVEGGQLDYY-VIAGP--TPKDVLEKYTDLTGKPPLPPKWALGWLWTSRYTYYDEDEVLEFIDEM 289 (772)
T ss_pred --EEcCCcceEEEEEEecCCcEEEE-EEeCC--CHHHHHHHHHHhhCCCCCCCceecCCCceeccccccHHHHHHHHhhc
Confidence 99998543 345555 3665 45785 99999999999999986 777665 2344442
Q ss_pred --c----eeE------e------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCC
Q 046216 184 --G----NII------H------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDG 245 (475)
Q Consensus 184 --~----D~~------W------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G 245 (475)
+ |++ | |+||+.+||||++|+++||++|+|+++||+|+|+.+. +.|+++.++|||||+++|
T Consensus 290 ~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~--~~~~e~~~~Gy~~k~~~g 367 (772)
T COG1501 290 RERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDS--PLFKEAIEKGYFVKDPDG 367 (772)
T ss_pred ccccCcceEEEEeehhhhccccceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCC--chHHHHHHCCeEEECCCC
Confidence 2 444 3 6678999999999999999999999999999999987 589999999999999999
Q ss_pred CCeeeeecCCccccCCCCCHHHHHHHHH-HHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccc
Q 046216 246 TPFIGEVWPGPCAFPDYTQSKVRSWWAS-LVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSY 324 (475)
Q Consensus 246 ~~~~~~~w~g~~~~~Dftnp~a~~ww~~-~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~ 324 (475)
.++.+.+||+.++++|||||+||+||++ ..+.++++||||||+|||||+.++.. ..+.+ .++.++
T Consensus 368 ~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~~~~~-------~~~~g-------~~~~~~ 433 (772)
T COG1501 368 EIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGD-------GFGNG-------IDHEEM 433 (772)
T ss_pred CEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCcccccc-------ccccc-------cCHHHH
Confidence 9999999999999999999999999995 55678899999999999999987641 12222 257899
Q ss_pred cccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCC
Q 046216 325 HNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFA 404 (475)
Q Consensus 325 hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~ 404 (475)
||+|++++++|+|+++++..+++|||+|+||+|+|+|||+++|+||+.++|++||.+|+++|++||||+||||+|||||.
T Consensus 434 ~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~wd~l~~si~~~Ls~~~sGi~~wg~DiGGF~ 513 (772)
T COG1501 434 HNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGSQRYAAHWSGDNRSSWDSLRESIPAGLSLSLSGIPFWGHDIGGFT 513 (772)
T ss_pred hcchhHHHHHHHHHHHHhhcCCCceEEEEecccccceeccceeCCccccchHHHHhhHHhhhchhccCCccccccccccC
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred C--CCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhHHHHHHHHHHHHhccCccC
Q 046216 405 G--NATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 405 g--~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~LlPYiYsl~~~a~~~tG~Pi 475 (475)
| ++++|||+||+|+|+|+|+||.|+. .+.+||||.|++++.+|+ +++||+|||||||++++||+ +|+||
T Consensus 514 g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlPYiYt~~~~a~~-tG~P~ 587 (772)
T COG1501 514 GGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLPYIYTLAAEASE-TGLPM 587 (772)
T ss_pred CCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccchHHHHHHHHHhc-cCCcc
Confidence 9 7899999999999999999999998 568999999999998887 99999999999999999998 99997
No 5
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=1.8e-90 Score=748.07 Aligned_cols=398 Identities=19% Similarity=0.306 Sum_probs=342.8
Q ss_pred CeEEEEEEecCCCeeeccccccCCcccCCceeEEeecCCC-CCCCC----------------CCCCccceeEEEEEcCCC
Q 046216 48 GQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSW-GYGTG----------------TTSLYQSHPWVLAVLPSG 110 (475)
Q Consensus 48 ~~~~~~~~l~~~e~~YGlGE~~~~l~~~G~~~~~wn~D~~-~~~~~----------------~~~lY~~~Pf~~s~~~~~ 110 (475)
+...+++.+.++|++|||||+.+.|+++|+++.+||+|+. +++.+ ..++|+++|||++ +
T Consensus 70 ~~~~~~~~~~~~E~~yGlGE~~~~l~~rG~~~~~w~~d~~~g~~~~~~~~~~~d~~~~~gg~~~~tY~~iPf~iS----s 145 (635)
T PRK10426 70 NRIWLRLAADPDEHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTYFPQPTFVS----S 145 (635)
T ss_pred cEEEEEEecCCCCeEECCCcCCChHhhCCCEEeeeecccccCcCccccccccccccccccCccccccceeCEEEE----c
Confidence 4567788999999999999999999999999999999975 23222 2589999999999 4
Q ss_pred ceEEEEeCCCCCeeeEEEEecCcee--EEEEe-cCCccEEEEccCCCHHHHHHHHHHhhcccc--ccccC--------CC
Q 046216 111 EALGVLADTTRRCEGFLIDLGKEST--IQFIA-PSSYPVITFGLFTSPTAVLVSLSHAVDNFL--CHSSL--------FH 177 (475)
Q Consensus 111 ~~~Gvf~~~~~~~~~~~id~~~~~~--~~~~~-~~~~~~i~~Gp~~tp~~vi~~y~~l~G~~~--~rw~Y--------~~ 177 (475)
++||||+||++.++ +|++.++. +.+.. ..+++ ++.|| +|++|+++|+++||+++ |+|++ .+
T Consensus 146 ~~ygv~~dn~~~~~---fd~~~~~~~~~~~~~~~~d~y-~~~G~--~~~~vi~~yt~ltGr~p~~P~Wal~G~~~g~~~~ 219 (635)
T PRK10426 146 QKYYCHVDNSAYMN---FDFSAPEYHELELWEDKATLR-FECAD--TYISLLEKLTALFGRQPELPDWAYDGVTLGIQGG 219 (635)
T ss_pred CCEEEEEcCCCcEE---EEecCCCccEEEEEeCCeeEE-EEeCC--CHHHHHHHHHHhhCCCCCCChhhccCccccccCC
Confidence 67999999999999 99987643 33322 23554 45674 99999999999999975 99987 23
Q ss_pred ccceee-------c----eeEe-------------------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCccccCCCc
Q 046216 178 DFHVQS-------G----NIIH-------------------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGY 227 (475)
Q Consensus 178 ~~~v~e-------~----D~~W-------------------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y 227 (475)
+++|++ + |+|| |+||+++||||++|+++||++|+|+++||+|+|+.+ +
T Consensus 220 ~~~v~~v~~~~r~~~IP~d~i~lddw~~~~~~~~g~~~~~~~~~d~~~FPdp~~mi~~L~~~G~k~v~~i~P~v~~~--~ 297 (635)
T PRK10426 220 TEVVQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQLNEEGIQFLGYINPYLASD--G 297 (635)
T ss_pred HHHHHHHHHHHHHcCCCeeEEEEecccccccccccccccccceEChhhCCCHHHHHHHHHHCCCEEEEEEcCccCCC--C
Confidence 456664 1 8876 134799999999999999999999999999999884 5
Q ss_pred cccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHH-HhhhCCccEEEecCCCCCCCCCCCCCCCCc
Q 046216 228 FVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVR-DFVYNGVDGIWNDMNKPAAFKSVTKTMPER 306 (475)
Q Consensus 228 ~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~-~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~ 306 (475)
++|++|.++|+|||+++|++|++.+|++.+++||||||+|++||+++++ .+.+.||||||+||||+ +|.+
T Consensus 298 ~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~---------~p~d 368 (635)
T PRK10426 298 DLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEY---------LPTD 368 (635)
T ss_pred HHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCC---------CCCc
Confidence 7899999999999999999999999999999999999999999999986 57789999999999995 3444
Q ss_pred ccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcce-eeCCCCCCChh---HHHHHH
Q 046216 307 NIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAA-TWTGDNVSNWE---HLHMSI 382 (475)
Q Consensus 307 ~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~-~W~GD~~s~W~---~L~~~I 382 (475)
..+... ..+.++||+|+++|+++++|++++..+.+|||++|||+|+|+|||++ +|+|||.|+|+ +|+.+|
T Consensus 369 ~~~~~g------~~~~~~hN~Y~~l~~~~~~e~~~~~~~~~r~f~ltRsg~aGsQry~~~~WsGD~~ssW~~~d~L~~~I 442 (635)
T PRK10426 369 AYLHNG------VSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGSQKYSTLFWAGDQNVDWSLDDGLASVV 442 (635)
T ss_pred ceeeCC------CCHHHhccHHHHHHHHHHHHHHHHhcCCCCcEEEEccccCCcCCccccccCCCCCCcCcChhHHHHHH
Confidence 433221 14678999999999999999999987778999999999999999986 89999999995 899999
Q ss_pred HHHHHHhhcCCCccccCCCCCCC----CCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCch--HHHHH---HHHh
Q 046216 383 SMVLQLGLSGQPHSGPDIGGFAG----NATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEE--PASVL---SSRP 453 (475)
Q Consensus 383 ~~~L~~~lsG~p~~g~DIgGf~g----~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~--~~~i~---i~lR 453 (475)
+++|++||||+||||+|||||.+ .+++|||+||+|+|||+|+||+|+.. .++|||.|+.. +.+.. +++|
T Consensus 443 ~~~Ls~glsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~epw~f~~~~~~~~~~~~~~~lR 520 (635)
T PRK10426 443 PAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMRTHEGN--RPGDNWQFDSDAETIAHFARMTRVF 520 (635)
T ss_pred HHHHHHHhcCcCccccccCCCcCcCCCCCCHHHHHHHHHHhcCCceeecCCCC--CCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999974 48999999999999999999999864 67999999643 32322 7999
Q ss_pred hhhHHHHHHHHHHHHhccCccC
Q 046216 454 SGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 454 y~LlPYiYsl~~~a~~~tG~Pi 475 (475)
|+|+|||||++++||+ +|+||
T Consensus 521 y~LlPYlytl~~~a~~-tG~Pi 541 (635)
T PRK10426 521 TTLKPYLKELVAEAAK-TGLPV 541 (635)
T ss_pred HHHHHHHHHHHHHHHh-hCCcc
Confidence 9999999999999998 99997
No 6
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-87 Score=711.55 Aligned_cols=434 Identities=31% Similarity=0.542 Sum_probs=383.9
Q ss_pred eEEEeCC--CCccccccCCCCcccceeeeecCeEEEEE--EecCCCeeeccccccCCc---ccCCceeEEeecCCCCCCC
Q 046216 19 LSFVNGK--DRDTPVSTHMRPLYTPIYRCVHGQQIVKL--EFPAGTSLYGTGEVSGQL---ERTGKRIFTWNTDSWGYGT 91 (475)
Q Consensus 19 ~~f~~~~--~~~~~~~t~~~~~~~p~~~~~~~~~~~~~--~l~~~e~~YGlGE~~~~l---~~~G~~~~~wn~D~~~~~~ 91 (475)
|+|.|+| +++++|||+..|++| ++|+|++ .||++-++||+||+.... ..+++++.+|++|...- .
T Consensus 144 F~f~v~R~s~g~~lfdTs~~~liF-------~DQflqlsT~LPs~~~iyG~gE~~~~~~~~~~~~~t~~l~~rd~~p~-~ 215 (805)
T KOG1065|consen 144 FSFSVTRWSDGRVLFDTSIGPLIF-------EDQFLQLSTYLPSENEIYGLGEHTHQSYRHDMNNLTWTLFARDYSPN-L 215 (805)
T ss_pred eEEEEEEecCCceeeecCCCceee-------eeeeeeeeccCCCcccccccccccchhhhcccCCceeeeeecccCCC-C
Confidence 9999999 999999999999999 9999999 588865699999976542 34788999999998532 3
Q ss_pred CCCCCccceeEEEEEcCCCceEEEEeCCCCCeeeEEEEecCceeEEEEecCCccE--EEEccCCCHHHHHHHHHHhhccc
Q 046216 92 GTTSLYQSHPWVLAVLPSGEALGVLADTTRRCEGFLIDLGKESTIQFIAPSSYPV--ITFGLFTSPTAVLVSLSHAVDNF 169 (475)
Q Consensus 92 ~~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~~~~~~id~~~~~~~~~~~~~~~~~--i~~Gp~~tp~~vi~~y~~l~G~~ 169 (475)
...|||++|||||..+.++.++|||+.|++.|| +.+.....+.++..++... ++.| ++|+.|++||.+++|+|
T Consensus 216 ~~~NLYGshPfymcle~~~~~~GVflLnSNamE---v~~~p~p~L~YR~iGGilD~y~flG--ptPe~vvqQy~q~iG~P 290 (805)
T KOG1065|consen 216 PGVNLYGSHPFYLCLEDDSGAHGVFLLNSNAME---VTLRPGPSLTYRTIGGILDFYVFLG--PTPEGVVQQYLQLIGRP 290 (805)
T ss_pred CcccccccccceeEeeccCCCceEEEeccCCce---EEeccCCeeEEEeecceEEEEEecC--CChHHHHHHHHHHhCCc
Confidence 467999999999999998899999999999999 9998777777776664332 3455 59999999999999875
Q ss_pred -----------cccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEe
Q 046216 170 -----------LCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWM 216 (475)
Q Consensus 170 -----------~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~ 216 (475)
+|||+|.+.+++++. |++| |+.|+.+||+.+.++++||++|+|+|+|
T Consensus 291 ~m~pYWslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykDFTvd~~~fp~~~~fv~~Lh~~G~kyvli 370 (805)
T KOG1065|consen 291 AMPPYWSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKDFTVDKVWFPDLKDFVDDLHARGFKYVLI 370 (805)
T ss_pred cCCchhhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccceeeccccCcchHHHHHHHHhCCCeEEEE
Confidence 499999999887751 7777 4457999999999999999999999999
Q ss_pred eCCccccCCCccccccCCCCceeeeCCCCCC-eeeeecCCccccCCCCCHHHHHHHHHHHHHhhh-CCccEEEecCCCCC
Q 046216 217 LDPGIKHEDGYFVYDSGPKIDVWIRKPDGTP-FIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVY-NGVDGIWNDMNKPA 294 (475)
Q Consensus 217 v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~-~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~-~G~dg~w~D~~E~~ 294 (475)
+||+|..+..|..|++|.++++||++.+|++ +.|.+|||.++|||||||++..||.++++.|.+ .++||+|+||||++
T Consensus 371 idP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wiDmnE~s 450 (805)
T KOG1065|consen 371 IDPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWIDMNEPS 450 (805)
T ss_pred eCCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHHhhcccCCccceEEECCCcc
Confidence 9999999888889999999999999999988 999999999999999999999999999999885 79999999999999
Q ss_pred CCCCCCCCCCCc-ccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCC
Q 046216 295 AFKSVTKTMPER-NIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVS 373 (475)
Q Consensus 295 ~f~~~~~~~p~~-~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s 373 (475)
+|+.. |.. .+..++.. ...++.||+||+.+++|++.++.++. ++|+++++||+|+|++||++||+|||.+
T Consensus 451 nf~~p----p~~~~~~~~~~~----~~tyd~~~lyg~~~aiat~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlgdn~~ 521 (805)
T KOG1065|consen 451 NFPSP----PINPTLDNGDLY----AKTYDTHNLYGYSEAIATHQALVDVP-GKRSFILSRSTFVGSGRYAGHWLGDNTA 521 (805)
T ss_pred cCCCC----Cccccccccccc----ccchhhhhhHhHHHhhhhhccceecc-ccccccccccceecccccceeecccccc
Confidence 99752 211 12222210 01278899999999999999999886 9999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHH--HHH
Q 046216 374 NWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASV--LSS 451 (475)
Q Consensus 374 ~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i--~i~ 451 (475)
+|+.|+.+|++||+++|+|+|++|+|||||.+.++||||.||+|+|||+|+||+|+..+..+|||+.|+..++.. ++-
T Consensus 522 ~w~~L~~sI~gml~fnl~Gip~Vg~Dicgf~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~sv~~a~r~~~~ 601 (805)
T KOG1065|consen 522 RWEDLQTSISGMLEFNLFGIPMVGSDICGFLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSSVAEAARNALT 601 (805)
T ss_pred eehhccccchhhhcccccCCCccchhhhcCCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998633322 299
Q ss_pred HhhhhHHHHHHHHHHHHhccCccC
Q 046216 452 RPSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 452 lRy~LlPYiYsl~~~a~~~tG~Pi 475 (475)
+||.||||+|+++++||. +|.||
T Consensus 602 ~ry~~lP~lytl~~~A~~-sG~pV 624 (805)
T KOG1065|consen 602 LRYTLLPYLYTLFYRAHV-SGEPV 624 (805)
T ss_pred heeeehhhHHHhhhhhhh-cCCcc
Confidence 999999999999999998 99997
No 7
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=2.4e-81 Score=635.85 Aligned_cols=305 Identities=48% Similarity=0.876 Sum_probs=283.1
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCcc
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGI 221 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i 221 (475)
.++|.++|||+|.++++|++. |+|| |+||+++||||++|+++||++|+|+++|++|+|
T Consensus 9 walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp~~m~~~l~~~g~~~~~~~~P~v 88 (339)
T cd06604 9 WALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDPKELIKELHEQGFKVVTIIDPGV 88 (339)
T ss_pred HHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCHHHHHHHHHHCCCEEEEEEeCce
Confidence 357999999999999998851 8887 556899999999999999999999999999999
Q ss_pred ccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCCCC
Q 046216 222 KHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTK 301 (475)
Q Consensus 222 ~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~ 301 (475)
+.+++|++|++++++|+||++++|+++++.+|||.+++||||||+|++||.++++++++.||||||+|+|||+.++....
T Consensus 89 ~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~ 168 (339)
T cd06604 89 KVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFNTPGK 168 (339)
T ss_pred eCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHhhCCCceEeecCCCccccCCccc
Confidence 98777889999999999999999999999999999999999999999999999999999999999999999999865433
Q ss_pred -CCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHHHH
Q 046216 302 -TMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHM 380 (475)
Q Consensus 302 -~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~ 380 (475)
++|.+..|.+... ...+.++||+|++++++|+++++++..+++|||+++||+|+|+|||+++|+||+.++|++|+.
T Consensus 169 ~~~p~~~~~~~~~~---~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~ssW~~L~~ 245 (339)
T cd06604 169 TTMPRDAVHRLDGG---GGTHEEVHNVYGLLMARATYEGLKKARPNERPFILTRAGYAGIQRYAAVWTGDNRSSWEHLRL 245 (339)
T ss_pred ccCCccceeeCCCC---CCcHhHhcchhhHHHHHHHHHHHHHhCCCCCcEEEEecccccccccccccCCcccCCHHHHHH
Confidence 4788887764321 135789999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhH
Q 046216 381 SISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMI 457 (475)
Q Consensus 381 ~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~Ll 457 (475)
+|+++|++||+|+|+||+|||||.+++++|||+||+|+|+|+|+||+|+..+..++|||.|++++.+++ +++||+||
T Consensus 246 ~i~~~l~~~l~G~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~Ll 325 (339)
T cd06604 246 SIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLRYRLL 325 (339)
T ss_pred HHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988778999999999888876 99999999
Q ss_pred HHHHHHHHHHHhccC
Q 046216 458 PFLNILLYNCIALVG 472 (475)
Q Consensus 458 PYiYsl~~~a~~~tG 472 (475)
|||||++++||+ ||
T Consensus 326 PY~ysl~~~a~~-tG 339 (339)
T cd06604 326 PYLYTLFWEASE-TG 339 (339)
T ss_pred HHHHHHHHHHhh-cC
Confidence 999999999998 88
No 8
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=8.2e-81 Score=625.42 Aligned_cols=283 Identities=36% Similarity=0.709 Sum_probs=267.8
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCcc
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGI 221 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i 221 (475)
..+|++||||+|.++++|++. |+|| |+||+++||||++|+++||++|+|+++|++|+|
T Consensus 9 walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~i~~l~~~g~k~~~~~~P~i 88 (317)
T cd06600 9 WALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEPKKLIDELHKRNVKLVTIVDPGI 88 (317)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCHHHHHHHHHHCCCEEEEEeeccc
Confidence 568999999999999998851 8887 566899999999999999999999999999999
Q ss_pred ccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhh-hCCccEEEecCCCCCCCCCCC
Q 046216 222 KHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFV-YNGVDGIWNDMNKPAAFKSVT 300 (475)
Q Consensus 222 ~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~-~~G~dg~w~D~~E~~~f~~~~ 300 (475)
..++.+..|.++.++++|||+.+|+++++.+|||.+++||||||+|++||.+++++++ +.||||||+|||||+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~---- 164 (317)
T cd06600 89 RVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDF---- 164 (317)
T ss_pred cCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCCCccH----
Confidence 9877778899999999999999999999999999999999999999999999999987 79999999999998643
Q ss_pred CCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHHHH
Q 046216 301 KTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHM 380 (475)
Q Consensus 301 ~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~ 380 (475)
.++||+|++++++++++++++..+++|||+++||+|+|+|||+++|+||+.|+|++|+.
T Consensus 165 ---------------------~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W~~L~~ 223 (317)
T cd06600 165 ---------------------EKVHNLYGLYEAMATAEGFRTSHPRNRIFILTRSGFAGSQKYAAIWTGDNTASWDDLKL 223 (317)
T ss_pred ---------------------HHhcchhhHHHHHHHHHHHHHhcCCCCceEEEeccccccCCccceECCcccccHHHHHH
Confidence 46899999999999999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhH
Q 046216 381 SISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMI 457 (475)
Q Consensus 381 ~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~Ll 457 (475)
+|+++|++||+|+||||+|||||.+++++|||+||+|+|||+|+||+|+.....++|||.|++++.+++ +++||+||
T Consensus 224 ~i~~~l~~gl~G~p~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~Ll 303 (317)
T cd06600 224 SIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVELRYKLL 303 (317)
T ss_pred HHHHHHHHHhcCCCccCcccCCCCCCCCHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988778999999999888876 99999999
Q ss_pred HHHHHHHHHHHhccC
Q 046216 458 PFLNILLYNCIALVG 472 (475)
Q Consensus 458 PYiYsl~~~a~~~tG 472 (475)
|||||++++||+ +|
T Consensus 304 PYlytl~~~a~~-~G 317 (317)
T cd06600 304 PYLYTLFLRAHE-KG 317 (317)
T ss_pred HHHHHHHHHHHh-cC
Confidence 999999999998 87
No 9
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=1.9e-80 Score=629.03 Aligned_cols=302 Identities=38% Similarity=0.727 Sum_probs=282.0
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCcc
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGI 221 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i 221 (475)
.++|.+||||+|.++++|++. |++| |+||+++||||++|+++||++|+|+++|++|+|
T Consensus 9 walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v 88 (339)
T cd06603 9 FSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHI 88 (339)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHHHHHHHHHHCCCEEEEEecCce
Confidence 578999999999999999861 8886 556899999999999999999999999999999
Q ss_pred ccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhh---CCccEEEecCCCCCCCCC
Q 046216 222 KHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVY---NGVDGIWNDMNKPAAFKS 298 (475)
Q Consensus 222 ~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~---~G~dg~w~D~~E~~~f~~ 298 (475)
..++++++|+++.++|+|||+.+|++|++.+|||.+++||||||+|++||.+++++++. .|++|||+|||||+.|+.
T Consensus 89 ~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~Ep~~f~~ 168 (339)
T cd06603 89 KRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNEPSVFNG 168 (339)
T ss_pred ecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCCccccCC
Confidence 98777889999999999999999999999999999999999999999999999998764 689999999999999987
Q ss_pred CCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcC-CCCcEEEecccccCCCCcceeeCCCCCCChhH
Q 046216 299 VTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADK-DKCPFVLTRAGVIGSQRYAATWTGDNVSNWEH 377 (475)
Q Consensus 299 ~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~-~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~ 377 (475)
.+.++|.+..|.+. ..+.++||+|++++++|+++++++..+ ++|||+++||+|+|+|||+++|+||+.|+|++
T Consensus 169 ~~~~~p~d~~~~~~------~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W~~ 242 (339)
T cd06603 169 PELTMPKDAIHYGG------IEHREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTATWEH 242 (339)
T ss_pred CCCcCCCcceecCC------CcHHHHhhHhHHHHHHHHHHHHHHhhccCCceEEEEecccccccceeeeeCCCccCCHHH
Confidence 77778888766542 257899999999999999999998864 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhh
Q 046216 378 LHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPS 454 (475)
Q Consensus 378 L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy 454 (475)
|+.+|+++|++|++|+|+||+|||||.+++++|||+||+|+|||+|+||+|+..++..+|||.|++++.+++ +++||
T Consensus 243 L~~~i~~~L~~~l~G~~~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy 322 (339)
T cd06603 243 LKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRLRY 322 (339)
T ss_pred HHHHHHHHHHHhhcCccccCCccCCcCCCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988778899999999998887 99999
Q ss_pred hhHHHHHHHHHHHHhccC
Q 046216 455 GMIPFLNILLYNCIALVG 472 (475)
Q Consensus 455 ~LlPYiYsl~~~a~~~tG 472 (475)
+|||||||++++||+ ||
T Consensus 323 ~LlPYlys~~~~a~~-tG 339 (339)
T cd06603 323 ALLPYWYTLFYEASV-TG 339 (339)
T ss_pred HHHHHHHHHHHHHhh-cC
Confidence 999999999999998 87
No 10
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=1.8e-78 Score=612.97 Aligned_cols=285 Identities=36% Similarity=0.707 Sum_probs=268.4
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------eccCCCCCCCh--HHHHHHHHHCCCeEEEeeCC
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDP--KSLATDLHLNGFKAIWMLDP 219 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp--~~~v~~L~~~g~k~v~~v~P 219 (475)
.++|.++|||+|.++++|+|. |++| |+||+++|||| ++|+++||++|+|+++|++|
T Consensus 9 walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P 88 (339)
T cd06602 9 WALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQHYVPILDP 88 (339)
T ss_pred HHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCCEEEEEEeC
Confidence 568999999999999988851 7776 55689999999 99999999999999999999
Q ss_pred ccccC---CCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhh-CCccEEEecCCCCCC
Q 046216 220 GIKHE---DGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVY-NGVDGIWNDMNKPAA 295 (475)
Q Consensus 220 ~i~~~---~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~-~G~dg~w~D~~E~~~ 295 (475)
+|..+ +.|.+|++|.++|+||++.+|+++++.+|||.+++||||||+|++||.++++++++ .||||||+|+|||+.
T Consensus 89 ~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~ 168 (339)
T cd06602 89 AISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNEPSN 168 (339)
T ss_pred ccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCCCch
Confidence 99986 46889999999999999999999999999999999999999999999999999775 799999999999864
Q ss_pred CCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCCh
Q 046216 296 FKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNW 375 (475)
Q Consensus 296 f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W 375 (475)
+ .++||+|++++++++++++++. +++|||++|||+|+|+|||+++|+||+.|+|
T Consensus 169 ~-------------------------~~~hN~y~~~~~~~~~~~~~~~-~~~r~~~~sRs~~~G~qry~~~w~GD~~s~W 222 (339)
T cd06602 169 F-------------------------YDVHNLYGLSEAIATYKALQSI-PGKRPFVISRSTFPGSGRYAGHWLGDNASTW 222 (339)
T ss_pred H-------------------------hhhcchhhHHHHHHHHHHHHhc-CCCCCEEEEecCcccccccceeECCCccCCH
Confidence 2 3589999999999999999988 7899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHH
Q 046216 376 EHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSR 452 (475)
Q Consensus 376 ~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~l 452 (475)
++|+.+|+++|++|+||+||||+|||||.|++++|||+||+|+|+|+|+||+|+..+...+|||.|++++.+++ ++|
T Consensus 223 ~~L~~~i~~~l~~~~sG~~~~~~DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r~~~~l 302 (339)
T cd06602 223 EDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAARKALNI 302 (339)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998778999999998888877 999
Q ss_pred hhhhHHHHHHHHHHHHhccCccC
Q 046216 453 PSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 453 Ry~LlPYiYsl~~~a~~~tG~Pi 475 (475)
||+|+|||||++++|++ +|+||
T Consensus 303 Ry~L~PYlys~~~~a~~-~G~Pi 324 (339)
T cd06602 303 RYSLLPYLYTLFYEAHT-SGTTV 324 (339)
T ss_pred HHHHHHHHHHHHHHHHh-hCCch
Confidence 99999999999999998 99997
No 11
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=7.5e-75 Score=609.59 Aligned_cols=319 Identities=34% Similarity=0.704 Sum_probs=278.9
Q ss_pred EEEccCCCHHHHHHHHHHhhcccc-----------ccccCCCccceeec-----------eeEe-----------eccCC
Q 046216 147 ITFGLFTSPTAVLVSLSHAVDNFL-----------CHSSLFHDFHVQSG-----------NIIH-----------IICSF 193 (475)
Q Consensus 147 i~~Gp~~tp~~vi~~y~~l~G~~~-----------~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~ 193 (475)
|+.|| +|++|+++|+++||+++ |||+|.++++|++. |++| |.+|+
T Consensus 2 ~~~G~--~~~~v~~~y~~ltG~~~~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~ 79 (441)
T PF01055_consen 2 FFSGP--TPKEVLRQYTELTGRPPLPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDP 79 (441)
T ss_dssp EEEES--SHHHHHHHHHHHHSSS----GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-T
T ss_pred EEeCc--CHHHHHHHHHHHHCCCCCCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceecccccccccccccccc
Confidence 56785 99999999999999864 78888888887751 8887 45579
Q ss_pred CCCCChHHHHHHHHHCCCeEEEeeCCccccCCC-ccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHH
Q 046216 194 EHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDG-YFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWA 272 (475)
Q Consensus 194 ~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~-y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~ 272 (475)
++||||++|++.||++|+|++++++|+|..++. |..|+++.++|+++++++|+++++.+|+|.++++|||||++++||.
T Consensus 80 ~~FPd~~~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~ 159 (441)
T PF01055_consen 80 ERFPDPKQMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWK 159 (441)
T ss_dssp TTTTTHHHHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHH
T ss_pred ccccchHHHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHH
Confidence 999999999999999999999999999998876 7789999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhC-CccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEE
Q 046216 273 SLVRDFVYN-GVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFV 351 (475)
Q Consensus 273 ~~~~~~~~~-G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~ 351 (475)
++++++++. |+||||+|+|||+.|. ...++|.+..+.+. ..+.++||+|++++++++++++++..+++|||+
T Consensus 160 ~~~~~~~~~~Gvdg~w~D~~E~~~~~-~~~~~~~~~~~~~~------~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~ 232 (441)
T PF01055_consen 160 EQLKELLDDYGVDGWWLDFGEPSSFD-SNNTLPEDAVHHDG------YSGYEMHNLYGLLYAKATYEALREIDPNKRPFI 232 (441)
T ss_dssp HHHHHHHTTST-SEEEEESTTTBSST-TTBSBCTTEECTTE------CEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-EE
T ss_pred HHHHHHHhccCCceEEeecCCccccc-ccccCcccceecCC------CCchheeccccccchhhhhhhhhhccCCCCcce
Confidence 999999987 9999999999999875 34455666655442 157899999999999999999998888999999
Q ss_pred EecccccCCCCcceeeCCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCC
Q 046216 352 LTRAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSET 431 (475)
Q Consensus 352 ~sRs~~~Gsqry~~~W~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~ 431 (475)
++||+++|+|||+++|+||+.++|++|+.+|+++|++|+||+|+||+|||||.+.+++|||+||+|+|+|+|+||+|+..
T Consensus 233 ~sRs~~~G~qr~~~~w~GD~~s~w~~L~~~i~~~l~~~~~G~~~~g~DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~ 312 (441)
T PF01055_consen 233 FSRSGWAGSQRYGGHWSGDNSSSWDGLRSSIPAMLNMGLSGYPFWGSDIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNK 312 (441)
T ss_dssp EESSEETTGGGTCEEEECSSBSSHHHHHHHHHHHHHHHCTT-SSEEEEET-SBSTSSHHHHHHHHHHHTTSSSEEEEEST
T ss_pred eecccCCCCCccceeecccccccHHHHHHHHHHHHHHhhhhcceecCcccccCCCCCHHHHHHHHHhhcCCcceeecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCccccCchHHHHH---HHHhhhhHHHHHHHHHHHHhccCccC
Q 046216 432 NTIDHEPRSFGEEPASVL---SSRPSGMIPFLNILLYNCIALVGLPA 475 (475)
Q Consensus 432 ~~~~~ePw~~~~~~~~i~---i~lRy~LlPYiYsl~~~a~~~tG~Pi 475 (475)
+..++|||.|++++++++ +++||+|||||||++++|++ +|+||
T Consensus 313 ~~~~~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~~~a~~-~G~Pi 358 (441)
T PF01055_consen 313 PSNPREPWSFGDEAEDIFRRAIRLRYRLLPYIYSLAYEAHA-TGEPI 358 (441)
T ss_dssp TSSB-SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHHHHHHH-HT--S
T ss_pred ccccccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHcc-CCCCc
Confidence 777789999999888875 99999999999999999998 99997
No 12
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=4.3e-71 Score=555.08 Aligned_cols=264 Identities=28% Similarity=0.513 Sum_probs=230.5
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------eccCCCCCCChHHHHHHHHHCCCeEEEeeCCcc
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGI 221 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i 221 (475)
.++|++||||+|.++++|++. |+|| |+||+++||||++|+++||++|+|++++++|+|
T Consensus 9 WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp~~mv~~L~~~G~klv~~i~P~i 88 (332)
T cd06601 9 YALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNPKEMFDNLHNKGLKCSTNITPVI 88 (332)
T ss_pred HHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCHHHHHHHHHHCCCeEEEEecCce
Confidence 578999999999999999861 8887 556899999999999999999999999999998
Q ss_pred ccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCC--
Q 046216 222 KHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSV-- 299 (475)
Q Consensus 222 ~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~-- 299 (475)
+ .|.+||+.+++||||||+|++||.++++.+.+.||||||+|||||++|+..
T Consensus 89 ~--------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~~Gv~~~W~DmnEp~~~~~~~~ 142 (332)
T cd06601 89 S--------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYLFDIGLEFVWQDMTTPAIMPSYGD 142 (332)
T ss_pred e--------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHHHhCCCceeecCCCCcccccCCCc
Confidence 7 134678888999999999999999999999999999999999999998752
Q ss_pred CCCCCCcccccCCCC--CCcccccccccccccchhHHHHHHHHHHhc--CCCCcEEEecccccCCCCcceeeCCCCCCCh
Q 046216 300 TKTMPERNIHRGLDE--IGGCQNHLSYHNVYGMPMARSTYEGMRLAD--KDKCPFVLTRAGVIGSQRYAATWTGDNVSNW 375 (475)
Q Consensus 300 ~~~~p~~~~~~g~~~--~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~--~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W 375 (475)
..++|.+.++..... ......|.++||+||+++++|++|++++.. +++||||||||+|+|+|||+++|+|||.|+|
T Consensus 143 ~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGsqrY~~~WsGDn~stW 222 (332)
T cd06601 143 MKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFAGLWTGDNSSSW 222 (332)
T ss_pred cCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCccCCcCceeCCCcccCH
Confidence 245676654432110 001125789999999999999999998775 7899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCCCccccCCCCCCCC----------CCHHHHHHHHHhhhhccccccCCCCC--CCCCCc-----
Q 046216 376 EHLHMSISMVLQLGLSGQPHSGPDIGGFAGN----------ATPRLFGRWMGIRAVFPFCRGHSETN--TIDHEP----- 438 (475)
Q Consensus 376 ~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~----------~~~EL~~RW~Q~gaf~P~~R~H~~~~--~~~~eP----- 438 (475)
+.|+.+|+++|++||||+||||+|||||.++ +++|||+||+|+|||+|+||+|+..+ +..|||
T Consensus 223 ~~L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~~~~~ 302 (332)
T cd06601 223 DFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELLIRWYQAGFLLPWFRNHYDRKIRQKFQEPAKYFQ 302 (332)
T ss_pred HHHHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHHHHHHHHHHhcCCceeccCCCCccCcccCCcccccc
Confidence 9999999999999999999999999999986 58999999999999999999999754 578888
Q ss_pred ------------cccCchHHHHH---HHHhh
Q 046216 439 ------------RSFGEEPASVL---SSRPS 454 (475)
Q Consensus 439 ------------w~~~~~~~~i~---i~lRy 454 (475)
|.| +++++|+ |++||
T Consensus 303 ~~~~~~~~~~~~~~~-~~~~~~~r~~i~~Ry 332 (332)
T cd06601 303 EPYAHLIDYEQLYLY-ENVPEICRKYVELRY 332 (332)
T ss_pred ccccccccccccccc-HHHHHHHHHHHHhcC
Confidence 555 7788877 99998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=5.9e-71 Score=554.36 Aligned_cols=274 Identities=27% Similarity=0.483 Sum_probs=247.6
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------------eccCCCCCCChHHHHHHHHHCCCeEEE
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------------IICSFEHFPDPKSLATDLHLNGFKAIW 215 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------------f~~~~~~fPdp~~~v~~L~~~g~k~v~ 215 (475)
.++|.++|||+|.++++|++. |++| |+||+++||||++|+++||++|+|+++
T Consensus 9 wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~ 88 (317)
T cd06598 9 WALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGVKTIV 88 (317)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCCcEEE
Confidence 467999999999999998851 7775 334799999999999999999999999
Q ss_pred eeCCccccCCCccccccCCCCcee-eeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCC
Q 046216 216 MLDPGIKHEDGYFVYDSGPKIDVW-IRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPA 294 (475)
Q Consensus 216 ~v~P~i~~~~~y~~y~~g~~~~~~-v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~ 294 (475)
||+|+|..++ +.|+++.++|++ +++.+|+++++.+|+|.+++||||||+|++||.++++++.+.||||||+|+|||+
T Consensus 89 ~v~P~v~~~~--~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gvdg~w~D~~Ep~ 166 (317)
T cd06598 89 ITEPFVLKNS--KNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLIDQGVTGWWGDLGEPE 166 (317)
T ss_pred EEcCcccCCc--hhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCcc
Confidence 9999999865 479999999995 5566789999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcce-eeCCCCCC
Q 046216 295 AFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAA-TWTGDNVS 373 (475)
Q Consensus 295 ~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~-~W~GD~~s 373 (475)
.+. .+..+.+. .+.++||+|+++++++++|++++..+++|||+++||+|+|+|||++ +|+||+.+
T Consensus 167 ~~~-------~~~~~~~g-------~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~~~~~Rs~~~Gsqry~~~~WsGD~~s 232 (317)
T cd06598 167 VHP-------PDMCHHKG-------KAAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAGSQRYGVIPWSGDVGR 232 (317)
T ss_pred ccC-------CccccCCC-------cHhHHhhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCccccCcCCccCCCCcC
Confidence 753 33333221 3678999999999999999999988899999999999999999985 89999999
Q ss_pred ChhHHHHHHHHHHHHhhcCCCccccCCCCCCCC--CCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH--
Q 046216 374 NWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGN--ATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL-- 449 (475)
Q Consensus 374 ~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~--~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~-- 449 (475)
+|++|+.+|+++|++||+|+||||+|||||.++ +++|||+||+|+|+|+|+||+|+..+ .++|||.|++++++++
T Consensus 233 ~W~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~~~EL~~RW~q~g~f~P~~R~H~~~~-~~~ePw~~~~~~~~~~r~ 311 (317)
T cd06598 233 TWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAFDPPFRPHAQNA-IPPEPVFYSIGTKNINRE 311 (317)
T ss_pred CHHHHHHHHHHHHhhhccCCcccCCCcCCcCCCCCCCHHHHHHHHHhccCCcccccCCCCC-CCCCCCcCChHHHHHHHH
Confidence 999999999999999999999999999999997 89999999999999999999999865 4699999999888876
Q ss_pred -HHHhh
Q 046216 450 -SSRPS 454 (475)
Q Consensus 450 -i~lRy 454 (475)
|++||
T Consensus 312 ~~~lRY 317 (317)
T cd06598 312 NIRLRY 317 (317)
T ss_pred HHHhhC
Confidence 99998
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1.7e-69 Score=543.01 Aligned_cols=272 Identities=26% Similarity=0.479 Sum_probs=249.6
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-------------eccCCCCCCChHHHHHHHHHCCCeEEEeeCC
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-------------IICSFEHFPDPKSLATDLHLNGFKAIWMLDP 219 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-------------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P 219 (475)
..+|.++|||+|.++++|+|. |++| |.+|+++||||++|+++||++|+|+++|++|
T Consensus 9 wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~~~~~~~~P 88 (308)
T cd06593 9 WSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGFKVCLWINP 88 (308)
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCCeEEEEecC
Confidence 356999999999999998861 7765 3347999999999999999999999999999
Q ss_pred ccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCC
Q 046216 220 GIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSV 299 (475)
Q Consensus 220 ~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~ 299 (475)
+|..++ ++|+++.++|+||++.+|+++.+.+|||.++++|||||+|++||.++++++.+.||||||+|+||+.
T Consensus 89 ~i~~~~--~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gid~~~~D~~e~~----- 161 (308)
T cd06593 89 YIAQKS--PLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLDMGVDCFKTDFGERI----- 161 (308)
T ss_pred CCCCCc--hhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHHhCCcEEecCCCCCC-----
Confidence 998865 4799999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCCCCccc-ccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHH
Q 046216 300 TKTMPERNI-HRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHL 378 (475)
Q Consensus 300 ~~~~p~~~~-~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L 378 (475)
|.+.. +.|. .+.++||+|+++++++++|++++..+++|||++|||+|+|+|||+++|+||+.++|++|
T Consensus 162 ----p~~~~~~~g~-------~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~~Gsqry~~~w~GD~~s~w~~L 230 (308)
T cd06593 162 ----PTDVVYYDGS-------DGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGSQKYPVHWGGDCESTFEGM 230 (308)
T ss_pred ----CccccccCCC-------CcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccccccCCCEECCCcccCHHHH
Confidence 33333 3332 46899999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCCCCCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhh
Q 046216 379 HMSISMVLQLGLSGQPHSGPDIGGFAGNATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSG 455 (475)
Q Consensus 379 ~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~ 455 (475)
+.+|+++|++||+|+|+||+|||||.+++++|||+||+|+|||+|+||+|+.. ++|||.|++++++++ +++||+
T Consensus 231 ~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~~lRy~ 307 (308)
T cd06593 231 AESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFAKLKYR 307 (308)
T ss_pred HHHHHHHHhccccCCceecCccCCcCCCCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999874 899999998888877 999999
Q ss_pred h
Q 046216 456 M 456 (475)
Q Consensus 456 L 456 (475)
|
T Consensus 308 L 308 (308)
T cd06593 308 L 308 (308)
T ss_pred C
Confidence 7
No 15
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=8.4e-69 Score=539.21 Aligned_cols=274 Identities=28% Similarity=0.417 Sum_probs=240.4
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-------------eccCCCCCCChHHHHHHHHHCCCeEEEeeCC
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-------------IICSFEHFPDPKSLATDLHLNGFKAIWMLDP 219 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-------------f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P 219 (475)
.++|.+||||+|.++++|++. |+|| |.||+++||||++|+++||++|+|++++++|
T Consensus 9 walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~P 88 (319)
T cd06591 9 WAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIWP 88 (319)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEecC
Confidence 467999999999999998861 7776 3347999999999999999999999999999
Q ss_pred ccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHH-hhhCCccEEEecCCCCCCCCC
Q 046216 220 GIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRD-FVYNGVDGIWNDMNKPAAFKS 298 (475)
Q Consensus 220 ~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~-~~~~G~dg~w~D~~E~~~f~~ 298 (475)
+|..++ ..|++++++++||++.+|+.+. .+|||.+++||||||+|++||.+++++ +.+.||||||+|||||+.+..
T Consensus 89 ~v~~~~--~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~ 165 (319)
T cd06591 89 TFGPET--ENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAEPEYSVY 165 (319)
T ss_pred CcCCCC--hhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCCCCccCC
Confidence 998754 5799999999999999998876 899999999999999999999888765 668999999999999987653
Q ss_pred CCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcce-eeCCCCCCChhH
Q 046216 299 VTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAA-TWTGDNVSNWEH 377 (475)
Q Consensus 299 ~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~-~W~GD~~s~W~~ 377 (475)
... .+......+ ++.++||+|+++++|+++|++++..+++|||+++||+|+|+|||++ +|+||+.|+|++
T Consensus 166 ~~~------~~~~~~~~~---~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~f~~sRs~~~Gsqry~~~~W~GD~~s~w~~ 236 (319)
T cd06591 166 DFG------LDNYRYHLG---PGLEVGNAYPLMHAKGIYEGQRAAGDEKRVVILTRSAWAGSQRYGALVWSGDIDSSWET 236 (319)
T ss_pred ccc------ccCcccCCC---CchhhhhhhHHHHHHHHHHHHHHhCCCCCceEEEeccccccccccCceeCCCccccHHH
Confidence 210 011111111 4678999999999999999999887789999999999999999985 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCCCCCC---------HHHHHHHHHhhhhccccccCCCCCC-CCCCccccCchHHH
Q 046216 378 LHMSISMVLQLGLSGQPHSGPDIGGFAGNAT---------PRLFGRWMGIRAVFPFCRGHSETNT-IDHEPRSFGEEPAS 447 (475)
Q Consensus 378 L~~~I~~~L~~~lsG~p~~g~DIgGf~g~~~---------~EL~~RW~Q~gaf~P~~R~H~~~~~-~~~ePw~~~~~~~~ 447 (475)
||.+|+++|++||||+||+|+|||||.++++ +|||+||+|+|||+|+||+|+.... ..+|||.|++++++
T Consensus 237 L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g~e~~~ 316 (319)
T cd06591 237 LRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFGAFCPVMRSHGTREPREINEFWSYGEEVYD 316 (319)
T ss_pred HHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCChHHHH
Confidence 9999999999999999999999999998765 8999999999999999999998654 35799999999988
Q ss_pred HH
Q 046216 448 VL 449 (475)
Q Consensus 448 i~ 449 (475)
|+
T Consensus 317 ~~ 318 (319)
T cd06591 317 IL 318 (319)
T ss_pred hh
Confidence 74
No 16
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.3e-68 Score=537.40 Aligned_cols=271 Identities=29% Similarity=0.523 Sum_probs=236.9
Q ss_pred HhhccccccccCCC-----ccceee-------c----eeEe---------------eccCCCCCCChHHHHHHHHHCCCe
Q 046216 164 HAVDNFLCHSSLFH-----DFHVQS-------G----NIIH---------------IICSFEHFPDPKSLATDLHLNGFK 212 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~-----~~~v~e-------~----D~~W---------------f~~~~~~fPdp~~~v~~L~~~g~k 212 (475)
..+|.+||||+|.+ |++|+| + |+|| |+|++++||||++|+++||++|+|
T Consensus 9 walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~g~k 88 (317)
T cd06599 9 WSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPAAFVAKFHERGIR 88 (317)
T ss_pred HHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHHHHHHHHHHCCCE
Confidence 56799999999988 777775 1 8876 334799999999999999999999
Q ss_pred EEEeeCCccccCCCccccccCCCCceeeeCCCCC-CeeeeecCCccccCCCCCHHHHHHHHHHHH-HhhhCCccEEEecC
Q 046216 213 AIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGT-PFIGEVWPGPCAFPDYTQSKVRSWWASLVR-DFVYNGVDGIWNDM 290 (475)
Q Consensus 213 ~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~-~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~-~~~~~G~dg~w~D~ 290 (475)
++++|+|+|..++ +.|+++.++++||++.+|+ ++++.+|+|.+++||||||+|++||.++++ .+.+.||||||+||
T Consensus 89 ~~~~i~P~i~~~~--~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~ 166 (317)
T cd06599 89 LAPNIKPGLLQDH--PRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDN 166 (317)
T ss_pred EEEEeCCcccCCC--HHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEEEecC
Confidence 9999999998764 5799999999999998875 688999999999999999999999999995 56789999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCC
Q 046216 291 NKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGD 370 (475)
Q Consensus 291 ~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD 370 (475)
|||+.+. .+..+.... .+ ..+.++||+|++++++|+++++++..+++|||+++||+|+|+|||+++|+||
T Consensus 167 ~E~~~~~-------~~~~~~~~g-~~--~~~~~~~n~y~~l~~~a~~~~~~~~~~~~r~f~ltRs~~~G~qry~~~WsGD 236 (317)
T cd06599 167 NEYEIWD-------DDAVCDGFG-KP--GTIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRSGFAGIQRYAQTWSGD 236 (317)
T ss_pred CCCccCC-------CcceecCCC-Cc--cchhhcccchHHHHHHHHHHHHHHhCCCCCcEEEEcCCcccccCCcCeeCCC
Confidence 9997542 222222111 11 1245689999999999999999988889999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCC-CCHHHHHHHHHhhhhccccccCCCCC-CCCCCccccCchHH
Q 046216 371 NVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGN-ATPRLFGRWMGIRAVFPFCRGHSETN-TIDHEPRSFGEEPA 446 (475)
Q Consensus 371 ~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~-~~~EL~~RW~Q~gaf~P~~R~H~~~~-~~~~ePw~~~~~~~ 446 (475)
+.++|++|+.+|+++|++||||+||||+|||||.++ +++|||+||+|+|+|+|+||+|+..+ ..+||||.|++.++
T Consensus 237 ~~s~W~~L~~~i~~~L~~glsG~~~~g~DIGGF~~~~~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~f~~~~~ 314 (317)
T cd06599 237 NRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWMYPEVTD 314 (317)
T ss_pred cccCHHHHHHHHHHHHhhhccCCcccccccCccCCCCCCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCeecccchh
Confidence 999999999999999999999999999999999986 79999999999999999999999754 46899999986544
No 17
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.9e-67 Score=532.45 Aligned_cols=268 Identities=24% Similarity=0.336 Sum_probs=233.6
Q ss_pred HhhccccccccCCCccceeec-----------eeEeec--------------------------c-----C-CCCCCChH
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIHII--------------------------C-----S-FEHFPDPK 200 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~Wf~--------------------------~-----~-~~~fPdp~ 200 (475)
..+|.+||||+|.++++|+|. |+||.. + + +++||||+
T Consensus 9 walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~~~~FPdp~ 88 (340)
T cd06597 9 WAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPVEGRWPNPK 88 (340)
T ss_pred HHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCccccCCCHH
Confidence 467999999999999999861 776421 1 1 36899999
Q ss_pred HHHHHHHHCCCeEEEeeCCccccCCC-----ccccccCCCCceeeeCCCCCCeee-eecCCccccCCCCCHHHHHHHHHH
Q 046216 201 SLATDLHLNGFKAIWMLDPGIKHEDG-----YFVYDSGPKIDVWIRKPDGTPFIG-EVWPGPCAFPDYTQSKVRSWWASL 274 (475)
Q Consensus 201 ~~v~~L~~~g~k~v~~v~P~i~~~~~-----y~~y~~g~~~~~~v~~~~G~~~~~-~~w~g~~~~~Dftnp~a~~ww~~~ 274 (475)
+||++||++|+|+++||+|+|+.+.. +..|.++.++++|||+++|+++.. .+|||.+++||||||+|++||+++
T Consensus 89 ~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~a~~Ww~~~ 168 (340)
T cd06597 89 GMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPEAAQWWMEK 168 (340)
T ss_pred HHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCHHHHHHHHHH
Confidence 99999999999999999999976421 224678999999999999999875 689999999999999999999999
Q ss_pred HHHhh-hCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEe
Q 046216 275 VRDFV-YNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLT 353 (475)
Q Consensus 275 ~~~~~-~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~s 353 (475)
++.++ +.||||||+||||+. + +.+..+... ..+.++||+||+++++++++++++. ++|||++|
T Consensus 169 ~~~~~~~~Gidg~w~D~~E~~-~-------~~~~~~~~g------~~~~~~hN~y~~~~~~~~~e~~~~~--~~r~filt 232 (340)
T cd06597 169 RRYLVDELGIDGFKTDGGEHV-W-------GRDLHFRDG------RRGDEMRNTYPNHYVRAYNDFLRRA--KKDGVTFS 232 (340)
T ss_pred HHHHHHhcCCcEEEecCCCcc-C-------CCCceecCC------CcHHHhhcccHHHHHHHHHHHHHhc--cCCcEEEE
Confidence 99988 599999999999985 2 222222211 1367899999999999999998876 78999999
Q ss_pred cccccCCCCcceeeCCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCC-CCHHHHHHHHHhhhhccccccCCCCC
Q 046216 354 RAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGN-ATPRLFGRWMGIRAVFPFCRGHSETN 432 (475)
Q Consensus 354 Rs~~~Gsqry~~~W~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~-~~~EL~~RW~Q~gaf~P~~R~H~~~~ 432 (475)
||+|+|+|||+++|+||+.|+|++||.+|+++|++||||+||||+|||||.|+ +++|||+||+|+|||+|+||+|+..+
T Consensus 233 Rs~~~Gsqry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIgGF~g~~~~~EL~~RW~Q~g~F~P~~R~H~~~~ 312 (340)
T cd06597 233 RAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTGDVPTAELYVRSTAMAAFVPIMQYHSEFN 312 (340)
T ss_pred ecccCccCCCcceecCCCCCCHHHHHHHHHHHHHHhhcCCCcCCCccCCcCCCCCCHHHHHHHHHHhhcchhhhhccCCC
Confidence 99999999999999999999999999999999999999999999999999998 89999999999999999999999865
Q ss_pred C-----CCCCccccCchHHH
Q 046216 433 T-----IDHEPRSFGEEPAS 447 (475)
Q Consensus 433 ~-----~~~ePw~~~~~~~~ 447 (475)
. ..||||.|++++.+
T Consensus 313 ~~~~~~~~~epw~~~~~~~~ 332 (340)
T cd06597 313 GHSSPNEDRTPWNIAERTGE 332 (340)
T ss_pred CCCcCcCCccCCcccCcCCC
Confidence 4 58999999987643
No 18
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=2.6e-67 Score=527.03 Aligned_cols=267 Identities=22% Similarity=0.377 Sum_probs=238.0
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-------------------eccCCCCCCChHHHHHHHHHCCCeE
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-------------------IICSFEHFPDPKSLATDLHLNGFKA 213 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-------------------f~~~~~~fPdp~~~v~~L~~~g~k~ 213 (475)
.++|.++||+.+ ++++|++. |+|| |+||+++||||++|+++||++|+|+
T Consensus 9 wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~lddw~~~~~~~~g~~~~~~f~~d~~~FPdp~~mi~~Lh~~G~~~ 87 (317)
T cd06594 9 WAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQDWTGRRETSFGDRLWWNWEWDPERYPGLDELIEELKARGIRV 87 (317)
T ss_pred hhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEccccCcccccccceeeeeeEEChhhCCCHHHHHHHHHHCCCEE
Confidence 457888888754 88888851 6665 2347999999999999999999999
Q ss_pred EEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHh-hhCCccEEEecCCC
Q 046216 214 IWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDF-VYNGVDGIWNDMNK 292 (475)
Q Consensus 214 v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~-~~~G~dg~w~D~~E 292 (475)
++||+|+|+.+... .|+++.++|+|||+++|+++++.+|||.+++||||||+|++||.++++++ .+.||||||+||||
T Consensus 88 ~~~i~P~v~~~~~~-~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 166 (317)
T cd06594 88 LTYINPYLADDGPL-YYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGE 166 (317)
T ss_pred EEEecCceecCCch-hHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCC
Confidence 99999999986542 37999999999999999999999999999999999999999999999987 68999999999999
Q ss_pred CCCCCCCCCCCCCcccc-cCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcce-eeCCC
Q 046216 293 PAAFKSVTKTMPERNIH-RGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAA-TWTGD 370 (475)
Q Consensus 293 ~~~f~~~~~~~p~~~~~-~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~-~W~GD 370 (475)
+. |.+..+ .|. ++.++||+|++++++++++++++..+++|||++|||+|+|+|||++ +|+||
T Consensus 167 ~~---------p~d~~~~~g~-------~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~Gsqry~~~~WsGD 230 (317)
T cd06594 167 YL---------PFDAVLHSGE-------DAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTGSQKYSTLFWAGD 230 (317)
T ss_pred CC---------CCcceecCCC-------CHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEcccccccccccccccCCC
Confidence 74 333333 221 4689999999999999999999988889999999999999999985 89999
Q ss_pred CCCChh---HHHHHHHHHHHHhhcCCCccccCCCCCCC----CCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCc
Q 046216 371 NVSNWE---HLHMSISMVLQLGLSGQPHSGPDIGGFAG----NATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGE 443 (475)
Q Consensus 371 ~~s~W~---~L~~~I~~~L~~~lsG~p~~g~DIgGf~g----~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~ 443 (475)
+.|+|+ +|+.+|+++|++||||+||||+|||||.+ ++++|||+||+|+|||+|+||+|+...+..++||.+++
T Consensus 231 ~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ 310 (317)
T cd06594 231 QMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQFYSDD 310 (317)
T ss_pred CCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCCCCCCHHHHHHHHHHhccccceecCCCCCCCCCcccccCh
Confidence 999998 79999999999999999999999999975 48999999999999999999999998888899999998
Q ss_pred hHHHH
Q 046216 444 EPASV 448 (475)
Q Consensus 444 ~~~~i 448 (475)
++.++
T Consensus 311 ~~~~~ 315 (317)
T cd06594 311 ETLRH 315 (317)
T ss_pred HHHHh
Confidence 87664
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=5.9e-61 Score=476.58 Aligned_cols=247 Identities=22% Similarity=0.311 Sum_probs=200.1
Q ss_pred HhhccccccccCCCccceee-------c----eeEe--------------------eccCCCCCCChHHHHHHHHHCCCe
Q 046216 164 HAVDNFLCHSSLFHDFHVQS-------G----NIIH--------------------IICSFEHFPDPKSLATDLHLNGFK 212 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e-------~----D~~W--------------------f~~~~~~fPdp~~~v~~L~~~g~k 212 (475)
..+|.+||||+|.++++|+| + |+|| |+||+++||||++|+++||++|+|
T Consensus 10 walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k 89 (292)
T cd06595 10 YAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLK 89 (292)
T ss_pred HHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCE
Confidence 46799999999999999886 1 6665 234799999999999999999999
Q ss_pred EEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH-HHhhhCCccEEEecCC
Q 046216 213 AIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV-RDFVYNGVDGIWNDMN 291 (475)
Q Consensus 213 ~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~-~~~~~~G~dg~w~D~~ 291 (475)
+++|++|+|..+..+..|++.. ++..++..+ +...++|||||++++||.+.+ +.+.+.||||||+|||
T Consensus 90 ~v~~v~P~~~~~~~~~~y~~~~-~~~~~~~~~----------~~~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~ 158 (292)
T cd06595 90 VTLNLHPADGIRAHEDQYPEMA-KALGVDPAT----------EGPILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQ 158 (292)
T ss_pred EEEEeCCCcccCCCcHHHHHHH-HhcCCCccc----------CCeEEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCC
Confidence 9999999987655445565421 111111111 123578999999999876665 4567899999999999
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchh-HHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCC
Q 046216 292 KPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPM-ARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGD 370 (475)
Q Consensus 292 E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~-~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD 370 (475)
||+.+. .||++++.+ .+..|+.+++ +++|||+||||+|+|+|||+++|+||
T Consensus 159 E~~~~~--------------------------~~~~~~~~~~~~~~y~~~~~--~~~r~f~lsRs~~~G~qry~~~WsGD 210 (292)
T cd06595 159 QGNRTR--------------------------TPGLDPLWWLNHVHYLDSAR--NGRRPLIFSRWAGLGSHRYPIGFSGD 210 (292)
T ss_pred CCcccc--------------------------cCCcchHHHHHHHHHHHhhc--cCCCcEEEEeecccCCCcCCCccCCC
Confidence 997641 122222221 3345665543 68999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCC-CCCHHHHHHHHHhhhhccccccCCCCCC-CCCCccccCchHHHH
Q 046216 371 NVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAG-NATPRLFGRWMGIRAVFPFCRGHSETNT-IDHEPRSFGEEPASV 448 (475)
Q Consensus 371 ~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g-~~~~EL~~RW~Q~gaf~P~~R~H~~~~~-~~~ePw~~~~~~~~i 448 (475)
+.|+|++|+.+|+++|++|+||+||||+|||||.+ ++++|||+||+|+|||+|+||+|+..+. .+||||.|++++++|
T Consensus 211 ~~s~W~~l~~~i~~~l~~~~sG~p~~g~DiGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~~~~~~ 290 (292)
T cd06595 211 TIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEEEASKI 290 (292)
T ss_pred cccCHHHHHHHHHHHHHHHhcCCCcCCCccCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCcHHHHh
Confidence 99999999999999999999999999999999999 7999999999999999999999998754 589999999998876
Q ss_pred H
Q 046216 449 L 449 (475)
Q Consensus 449 ~ 449 (475)
+
T Consensus 291 ~ 291 (292)
T cd06595 291 M 291 (292)
T ss_pred h
Confidence 4
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=8e-58 Score=448.65 Aligned_cols=229 Identities=38% Similarity=0.670 Sum_probs=204.8
Q ss_pred HhhccccccccCCCccceeec-----------eeEe-----------e--ccCCCCCCChHHHHHHHHHCCCeEEEeeCC
Q 046216 164 HAVDNFLCHSSLFHDFHVQSG-----------NIIH-----------I--ICSFEHFPDPKSLATDLHLNGFKAIWMLDP 219 (475)
Q Consensus 164 ~l~G~~~~rw~Y~~~~~v~e~-----------D~~W-----------f--~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P 219 (475)
.+.|.++|||+|.++++|+|. |++| | ++++++||||++|+++||++|+|+++|++|
T Consensus 9 wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp~~~i~~l~~~g~~~~~~~~P 88 (265)
T cd06589 9 WAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNPKSMIDELHDNGVKLVLWIDP 88 (265)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCHHHHHHHHHHCCCEEEEEeCh
Confidence 357999999999999998861 7776 5 668999999999999999999999999999
Q ss_pred ccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHh-hhCCccEEEecCCCCCCCCC
Q 046216 220 GIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDF-VYNGVDGIWNDMNKPAAFKS 298 (475)
Q Consensus 220 ~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~-~~~G~dg~w~D~~E~~~f~~ 298 (475)
+| ++||.++++++ .+.||||||+|+|||+.++.
T Consensus 89 ~v----------------------------------------------~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~ 122 (265)
T cd06589 89 YI----------------------------------------------REWWAEVVKKLLVSLGVDGFWTDMGEPSPGDG 122 (265)
T ss_pred hH----------------------------------------------HHHHHHHHHHhhccCCCCEEeccCCCCCcCCC
Confidence 88 88999999987 68999999999999987743
Q ss_pred CCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHH
Q 046216 299 VTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHL 378 (475)
Q Consensus 299 ~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L 378 (475)
.. ...+.. +...+.++||+|+++++|++++++++..+++|||+++||+++|+|||+++|+||+.++|+.|
T Consensus 123 ~~-------~~~~~~---~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~stW~~l 192 (265)
T cd06589 123 NI-------FTGGVV---GRVKHEEMHNAYPLLYAEATYEALRKNSKNKRPFILSRSGYAGSQRYAGMWSGDNTSTWGYL 192 (265)
T ss_pred cc-------ccCCcC---CCccHHHHcchhHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccccCcCceeCCcccCCHHHH
Confidence 21 111100 11257899999999999999999999888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCCC-CCCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHH
Q 046216 379 HMSISMVLQLGLSGQPHSGPDIGGFAG-NATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASV 448 (475)
Q Consensus 379 ~~~I~~~L~~~lsG~p~~g~DIgGf~g-~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i 448 (475)
|.+|+++|++||+|+||+|+|||||.+ ++++|||+||+|+|+|+|+||+|+......+|||.|++++.++
T Consensus 193 ~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~ 263 (265)
T cd06589 193 RSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAI 263 (265)
T ss_pred HHHHHHHHhhhccCCcccCCCcCCCCCCCCCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHh
Confidence 999999999999999999999999999 8999999999999999999999999888889999999887765
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.7e-57 Score=454.01 Aligned_cols=228 Identities=24% Similarity=0.383 Sum_probs=203.3
Q ss_pred eccCCCCCCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCC-CCeeeeecCCccccCCCCCHHH
Q 046216 189 IICSFEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDG-TPFIGEVWPGPCAFPDYTQSKV 267 (475)
Q Consensus 189 f~~~~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G-~~~~~~~w~g~~~~~Dftnp~a 267 (475)
|++|+++||||++|+++||++|+|+++|++|+|+.++ ..|+++.++++||++++| .++.+.+|+|.++++|||||+|
T Consensus 62 f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~s--~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a 139 (303)
T cd06592 62 FDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTDS--ENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEA 139 (303)
T ss_pred cccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCCC--HHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHH
Confidence 4557999999999999999999999999999998765 479999999999999998 7889999999999999999999
Q ss_pred HHHHHHHHHHhh-hCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCC
Q 046216 268 RSWWASLVRDFV-YNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKD 346 (475)
Q Consensus 268 ~~ww~~~~~~~~-~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~ 346 (475)
++||.++++.++ +.||||||+|||||+. +|.+..+. .+..+||.|..++++++++
T Consensus 140 ~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~-------~p~~~~~~---------~~~~~~n~y~~~~~~~~~~-------- 195 (303)
T cd06592 140 VDWFLSRLKSLQEKYGIDSFKFDAGEASY-------LPQDYVTE---------DPLLNPDEYTRLYAEMVAE-------- 195 (303)
T ss_pred HHHHHHHHHHHHHHhCCcEEEeCCCCccc-------CCcccccC---------CcccCHHHHHHHHHHHHHh--------
Confidence 999999999988 8999999999999974 34443332 1356799999988887654
Q ss_pred CCcEEEecccccCCCCcceeeCCCCCCChhHH---HHHHHHHHHHhhcCCCccccC-CCCCCC-------CCCHHHHHHH
Q 046216 347 KCPFVLTRAGVIGSQRYAATWTGDNVSNWEHL---HMSISMVLQLGLSGQPHSGPD-IGGFAG-------NATPRLFGRW 415 (475)
Q Consensus 347 ~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L---~~~I~~~L~~~lsG~p~~g~D-IgGf~g-------~~~~EL~~RW 415 (475)
.++|+++||+|+|+|+++++|+||+.|+|++| +.+|+++|++||||+||||+| ||||.+ .+++|||+||
T Consensus 196 ~~~~~~~Rsg~~g~~~~~~~w~GD~~s~W~~~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~~~~~~~~EL~~RW 275 (303)
T cd06592 196 FGDLIEVRAGWRSQGLPLFVRMMDKDSSWGGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRW 275 (303)
T ss_pred hccceEEEeeeecCCCCeeEEcCCCCCCCCCCcCHHHHHHHHHHhhccCCcccCCCccCCccccccccCCCCCHHHHHHH
Confidence 23899999999999888899999999999977 999999999999999999999 899974 3799999999
Q ss_pred HHhhhhccccccCCCCCCCCCCccccCchHHHHH
Q 046216 416 MGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL 449 (475)
Q Consensus 416 ~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~ 449 (475)
+|+|+|+|+||+| +|||.|++++++++
T Consensus 276 ~q~g~f~P~~R~h-------~~PW~~~~e~~~~~ 302 (303)
T cd06592 276 LQLSAFLPVMQFS-------IAPWQYDDEVVEIA 302 (303)
T ss_pred HHHHHhChhhhcc-------cCCccCCHHHHHhh
Confidence 9999999999999 58999999888764
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2e-44 Score=341.84 Aligned_cols=133 Identities=29% Similarity=0.552 Sum_probs=128.3
Q ss_pred cccchhHHHHHHHHHHhcCCCCcEEEecccccCCCCcceeeCCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCCC
Q 046216 327 VYGMPMARSTYEGMRLADKDKCPFVLTRAGVIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAGN 406 (475)
Q Consensus 327 ~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g~ 406 (475)
.|++.++|++|+++++. +++|||+||||+|+|+|||+++|+||+.++|++|+.+|+++|++||||+||||+|||||.|+
T Consensus 126 ~~~l~~~ka~yeg~~~~-~~~RpfiltRsg~aGsQRy~~~WsGD~~stWe~Lr~sI~~~L~~gLsG~p~~G~DIGGF~g~ 204 (261)
T cd06596 126 SFALNGVKAAADGIESN-SNARPFIVTVDGWAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFGG 204 (261)
T ss_pred hHHHHHHHHHHHHHHhC-CCCCCEEEEecCccccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhcCCCcCccccCcCCCC
Confidence 47889999999999887 88999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHhhhhccccccCCCCCCCCCCccccCchHHHHH---HHHhhhhHHHHH
Q 046216 407 ATPRLFGRWMGIRAVFPFCRGHSETNTIDHEPRSFGEEPASVL---SSRPSGMIPFLN 461 (475)
Q Consensus 407 ~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~i~---i~lRy~LlPYiY 461 (475)
++|||+||+|+|+|+|+||+|+..++.+||||.|++++++|+ |++||+||||||
T Consensus 205 -~~EL~vRW~Q~gaF~P~~R~h~~~~~~~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 205 -SPETYTRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred -CHHHHHHHHHHHHhhhhhhhccCCCCCCCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 999999999999999999999988889999999999998887 999999999998
No 23
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.69 E-value=4.6e-17 Score=126.16 Aligned_cols=67 Identities=42% Similarity=0.743 Sum_probs=49.7
Q ss_pred CCeeeccccccCCcccCCceeEEeecCCCCCC-CCCCCCccceeEEEEEcCCCceEEEEeCCCCCeeeEEEE
Q 046216 59 GTSLYGTGEVSGQLERTGKRIFTWNTDSWGYG-TGTTSLYQSHPWVLAVLPSGEALGVLADTTRRCEGFLID 129 (475)
Q Consensus 59 ~e~~YGlGE~~~~l~~~G~~~~~wn~D~~~~~-~~~~~lY~~~Pf~~s~~~~~~~~Gvf~~~~~~~~~~~id 129 (475)
||++||||||.+.|+++|+++.+||+|++++. ...++||+++||+|.++ ++++||||+||+.++. ||
T Consensus 1 de~~yGlGE~~~~l~~~g~~~~~~n~D~~~~~~~~~~~lY~siPf~~~~~-s~~~yGvf~dn~~~~~---~D 68 (68)
T PF13802_consen 1 DERFYGLGERFGPLNRRGKRYRLWNTDAFGYNGPSSDPLYKSIPFFIAHR-SGKGYGVFFDNPSRTF---FD 68 (68)
T ss_dssp T-EEEEESS-SS-SS-TTEEEEE-B---TSS-GTTBS-BSEEEEEEEEEE-CTCEEEEEEE-SS-EE---EE
T ss_pred CCcEEcccccCCCcccCCcEEEEEECcCCCcCCCcCccccccEeEEEEeC-CCCEEEEEEeCCCceE---EC
Confidence 68999999999999999999999999999887 45789999999999766 3689999999999998 76
No 24
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=98.63 E-value=3.2e-07 Score=94.63 Aligned_cols=95 Identities=25% Similarity=0.368 Sum_probs=67.5
Q ss_pred CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHH
Q 046216 192 SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSW 270 (475)
Q Consensus 192 ~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~w 270 (475)
++++||+ .+.+++.+|++|+|+.+|+.|.+..... .+|.+- -+..++..+.....+ ....++|+++|++++|
T Consensus 98 ~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S-~l~~~h--Pdw~l~~~~~~~~~~----r~~~vLD~~~pev~~~ 170 (394)
T PF02065_consen 98 DPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSPDS-DLYREH--PDWVLRDPGRPPTLG----RNQYVLDLSNPEVRDY 170 (394)
T ss_dssp BTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEESSS-CHCCSS--BGGBTCCTTSE-ECB----TTBEEB-TTSHHHHHH
T ss_pred ChhhhCCcHHHHHHHHHHCCCeEEEEeccccccchh-HHHHhC--ccceeecCCCCCcCc----ccceEEcCCCHHHHHH
Confidence 6899999 8999999999999999999998753222 355432 245555443322222 2446799999999999
Q ss_pred HHHHHHHhh-hCCccEEEecCCCC
Q 046216 271 WASLVRDFV-YNGVDGIWNDMNKP 293 (475)
Q Consensus 271 w~~~~~~~~-~~G~dg~w~D~~E~ 293 (475)
..+.+.+++ +.|||.+|.|||..
T Consensus 171 l~~~i~~ll~~~gidYiK~D~n~~ 194 (394)
T PF02065_consen 171 LFEVIDRLLREWGIDYIKWDFNRD 194 (394)
T ss_dssp HHHHHHHHHHHTT-SEEEEE-TS-
T ss_pred HHHHHHHHHHhcCCCEEEeccccC
Confidence 999998865 69999999999974
No 25
>PLN03231 putative alpha-galactosidase; Provisional
Probab=98.25 E-value=2.4e-05 Score=79.35 Aligned_cols=159 Identities=16% Similarity=0.132 Sum_probs=99.0
Q ss_pred CCCCCCC------hHHHHHHHHHCCCeEEEeeCCccccCC---Cccccc-cCCCCceeeeCCCC-CCeeeeecC-Ccccc
Q 046216 192 SFEHFPD------PKSLATDLHLNGFKAIWMLDPGIKHED---GYFVYD-SGPKIDVWIRKPDG-TPFIGEVWP-GPCAF 259 (475)
Q Consensus 192 ~~~~fPd------p~~~v~~L~~~g~k~v~~v~P~i~~~~---~y~~y~-~g~~~~~~v~~~~G-~~~~~~~w~-g~~~~ 259 (475)
+++|||+ .+.+.+.+|++|+|+-+.++|++.... ++++.- .|. .++-..-.|- .+-....|. ..-.-
T Consensus 75 d~~rFPs~~~~~G~k~lADyvHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs-~g~~~~a~Dia~~~~~c~~~~~~~~~ 153 (357)
T PLN03231 75 DPKRWPSTTGGKGFAPIAAKVHALGLKLGIHVMRGISTTAVKKKTPILGAFKS-NGHAWNAKDIALMDQACPWMQQCFVG 153 (357)
T ss_pred CcccCCCCccccCcHHHHHHHHhCCcceEEEecCCccchhcccCCccCCCCcc-cccccchhhhcccccccccccccccc
Confidence 7899996 899999999999999999999987542 121110 000 0110000000 000111232 22236
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHH
Q 046216 260 PDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEG 339 (475)
Q Consensus 260 ~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~ 339 (475)
+|..+|.|++|..+..+.|-+.|||.+|.|.+.... . .+ ...| .+..++
T Consensus 154 v~~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~~-----------~------------~~---~~~y-----~~m~~A 202 (357)
T PLN03231 154 VNTSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGAE-----------N------------PQ---LDEI-----LTVSKA 202 (357)
T ss_pred ccccchhHHHHHHHHHHHHHHhCCCEEeecccCCCC-----------c------------cc---HHHH-----HHHHHH
Confidence 899999999999999999989999999999643210 0 00 0112 244566
Q ss_pred HHHhcCCCCcEEEecccccCC--------CCcceee--CCCCCCChhHHHHHHHHH
Q 046216 340 MRLADKDKCPFVLTRAGVIGS--------QRYAATW--TGDNVSNWEHLHMSISMV 385 (475)
Q Consensus 340 ~~~~~~~~r~~~~sRs~~~Gs--------qry~~~W--~GD~~s~W~~L~~~I~~~ 385 (475)
|++ ..||+++|-|-..+. +.++..| +||...+|+.+...+...
T Consensus 203 L~~---tGRpIv~Slc~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~ 255 (357)
T PLN03231 203 IRN---SGRPMIYSLSPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVA 255 (357)
T ss_pred HHH---hCCCeEEEecCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHH
Confidence 654 479999998742111 2234456 699999999988777654
No 26
>PLN02899 alpha-galactosidase
Probab=97.96 E-value=0.00023 Score=76.05 Aligned_cols=155 Identities=15% Similarity=0.178 Sum_probs=95.8
Q ss_pred CCCCCCC------hHHHHHHHHHCCCeEEEeeCCccccCC---Cccc--------cccCCCCceeeeCCCCCCeeeeecC
Q 046216 192 SFEHFPD------PKSLATDLHLNGFKAIWMLDPGIKHED---GYFV--------YDSGPKIDVWIRKPDGTPFIGEVWP 254 (475)
Q Consensus 192 ~~~~fPd------p~~~v~~L~~~g~k~v~~v~P~i~~~~---~y~~--------y~~g~~~~~~v~~~~G~~~~~~~w~ 254 (475)
|++|||. .+.+.+.+|++|.|+-+.+++++.... +.++ |. +...++-.++. +.+-..-.|.
T Consensus 102 Dp~RFPSs~~g~GmK~LADYVHskGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~-~s~~~~~a~DI-a~~~~tC~w~ 179 (633)
T PLN02899 102 DPGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYE-ESGRQWRAKDI-ALKERACAWM 179 (633)
T ss_pred CcccCCCCccCCCcHHHHHHHHhCCcceEEEecCCCcccccccCCcccccccccccc-ccccccchhhc-cccccccccC
Confidence 7899994 899999999999999999999986431 1111 11 00011111110 0000001121
Q ss_pred C-ccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhH
Q 046216 255 G-PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMA 333 (475)
Q Consensus 255 g-~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~ 333 (475)
. .---+|.+.+.+++|..+..+.|-+.|||.+|.|..-+. .. . ....
T Consensus 180 ~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~~------------~~--------------~------~~ey 227 (633)
T PLN02899 180 SHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFGD------------DF--------------D------LEEI 227 (633)
T ss_pred CCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCCC------------CC--------------C------hHHH
Confidence 1 112478888999999998888888999999999953210 00 0 0012
Q ss_pred HHHHHHHHHhcCCCCcEEEecccccCCC----------Ccceee--CCCCCCChhHHHHHHHHH
Q 046216 334 RSTYEGMRLADKDKCPFVLTRAGVIGSQ----------RYAATW--TGDNVSNWEHLHMSISMV 385 (475)
Q Consensus 334 ~a~~~~~~~~~~~~r~~~~sRs~~~Gsq----------ry~~~W--~GD~~s~W~~L~~~I~~~ 385 (475)
++..+++++ ..||++++=|- |.+ .++-.| +||...+|+.+...+..+
T Consensus 228 ~~ms~AL~a---TGRPIvySLsp--G~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~ 286 (633)
T PLN02899 228 TYVSEVLKE---LDRPIVYSLSP--GTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVS 286 (633)
T ss_pred HHHHHHHHH---hCCCeEEEecC--CcccchhhhhhhhccCccceecCCcccchHHHHHHHHHH
Confidence 345667765 47999999873 332 233455 699999999888776543
No 27
>PLN02692 alpha-galactosidase
Probab=97.20 E-value=0.0048 Score=63.78 Aligned_cols=124 Identities=19% Similarity=0.189 Sum_probs=82.0
Q ss_pred CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHH
Q 046216 192 SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSW 270 (475)
Q Consensus 192 ~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~w 270 (475)
|+++||+ .+.+++.+|++|+|+-++.+++...... ..|.+..+
T Consensus 115 d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~tC~~------------------------------------~~pGS~g~ 158 (412)
T PLN02692 115 KKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSK------------------------------------TMPGSLGH 158 (412)
T ss_pred ChhhcCCcHHHHHHHHHHCCCceEEEecCCccccCC------------------------------------CCCCchHH
Confidence 6899998 8999999999999999999877543211 12334455
Q ss_pred HHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcE
Q 046216 271 WASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPF 350 (475)
Q Consensus 271 w~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~ 350 (475)
...-.+.|-+.|||.+|.|.+-.. + ......|. +..+++++ ..||+
T Consensus 159 e~~DA~~fA~WGvDylK~D~C~~~----------------~----------~~~~~~y~-----~m~~AL~~---tGRpI 204 (412)
T PLN02692 159 EEQDAKTFASWGIDYLKYDNCNND----------------G----------SKPTVRYP-----VMTRALMK---AGRPI 204 (412)
T ss_pred HHHHHHHHHhcCCCEEeccccCCC----------------C----------cchhHHHH-----HHHHHHHH---hCCCe
Confidence 555556677899999999986321 0 00011222 23455554 46999
Q ss_pred EEecccccCCC------Ccceee--CCCCCCChhHHHHHHHHH
Q 046216 351 VLTRAGVIGSQ------RYAATW--TGDNVSNWEHLHMSISMV 385 (475)
Q Consensus 351 ~~sRs~~~Gsq------ry~~~W--~GD~~s~W~~L~~~I~~~ 385 (475)
+++-+.|.-.. .++..| +||...+|+++...+...
T Consensus 205 ~~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~~ 247 (412)
T PLN02692 205 FFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMN 247 (412)
T ss_pred EEEecCCCcCChhhhhhhcCCccccccccccchHhHHHHHHHH
Confidence 99876554322 234455 699999999888777543
No 28
>PLN02229 alpha-galactosidase
Probab=97.15 E-value=0.0053 Score=63.75 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHH
Q 046216 192 SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSW 270 (475)
Q Consensus 192 ~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~w 270 (475)
|++|||+ .+.+.+.+|++|+|+-++.++++....+| ||. .++....
T Consensus 122 d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~~--------------------------pGS---~g~e~~D---- 168 (427)
T PLN02229 122 DPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVR--------------------------PGS---LFHEVDD---- 168 (427)
T ss_pred ChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCCC--------------------------CCC---ccHHHHH----
Confidence 7899997 89999999999999999999988765432 121 1111111
Q ss_pred HHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcE
Q 046216 271 WASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPF 350 (475)
Q Consensus 271 w~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~ 350 (475)
.+.|-+.|||.+|.|.+-... .+....|+ +..+++++ ..||+
T Consensus 169 ----A~~fA~WGVDylK~D~C~~~~--------------------------~~~~~~y~-----~m~~AL~~---tGRpI 210 (427)
T PLN02229 169 ----ADIFASWGVDYLKYDNCYNLG--------------------------IKPIERYP-----PMRDALNA---TGRSI 210 (427)
T ss_pred ----HHHHHHcCCCEEEecCCCCCC--------------------------cchhHHHH-----HHHHHHHh---hCCCc
Confidence 233557899999999863210 00111232 23455543 47999
Q ss_pred EEecccccCC------CCcceee--CCCCCCChhHHHHHHHHH
Q 046216 351 VLTRAGVIGS------QRYAATW--TGDNVSNWEHLHMSISMV 385 (475)
Q Consensus 351 ~~sRs~~~Gs------qry~~~W--~GD~~s~W~~L~~~I~~~ 385 (475)
+++-+.|.-. +.++..| +||...+|+++...+...
T Consensus 211 ~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~~ 253 (427)
T PLN02229 211 FYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTIADLN 253 (427)
T ss_pred EEEecCCCCCCHHHHHHhhcCeeeccCCcccccccHHHHHHHH
Confidence 9986654321 2334466 699999999988777543
No 29
>PLN02808 alpha-galactosidase
Probab=96.91 E-value=0.014 Score=60.14 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=80.8
Q ss_pred CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHH
Q 046216 192 SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSW 270 (475)
Q Consensus 192 ~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~w 270 (475)
|++|||+ .+.+.+.+|++|+|+-++.+++...... ..|.+..+
T Consensus 91 d~~rFP~G~~~lad~iH~~GlkfGiy~~~G~~tC~~------------------------------------~~pGs~~~ 134 (386)
T PLN02808 91 KASTFPSGIKALADYVHSKGLKLGIYSDAGTLTCSK------------------------------------TMPGSLGH 134 (386)
T ss_pred ChhhcCccHHHHHHHHHHCCCceEEEecCCccccCC------------------------------------CCCcchHH
Confidence 6899998 8999999999999999999876433221 11333445
Q ss_pred HHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcE
Q 046216 271 WASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPF 350 (475)
Q Consensus 271 w~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~ 350 (475)
...-.+.|-+.|||.+|.|.+-... ...+..| .+..+++.+ ..||+
T Consensus 135 e~~DA~~fA~WGvDylK~D~C~~~~--------------------------~~~~~~y-----~~m~~AL~~---tGRpi 180 (386)
T PLN02808 135 EEQDAKTFASWGIDYLKYDNCENTG--------------------------TSPQERY-----PKMSKALLN---SGRPI 180 (386)
T ss_pred HHHHHHHHHHhCCCEEeecCcCCCC--------------------------ccHHHHH-----HHHHHHHHH---hCCCe
Confidence 5555566778999999999863210 0112223 223445543 36999
Q ss_pred EEecccccCC------CCcceee--CCCCCCChhHHHHHHHHH
Q 046216 351 VLTRAGVIGS------QRYAATW--TGDNVSNWEHLHMSISMV 385 (475)
Q Consensus 351 ~~sRs~~~Gs------qry~~~W--~GD~~s~W~~L~~~I~~~ 385 (475)
+++-+.|... +.++..| ++|...+|+++...+...
T Consensus 181 ~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~~ 223 (386)
T PLN02808 181 FFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADQN 223 (386)
T ss_pred EEEecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHHHHhh
Confidence 9986654311 1223355 689999999888877543
No 30
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=96.89 E-value=0.0041 Score=54.51 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=58.1
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCc-cccCCCCCHHHHHHHHHHHHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGP-CAFPDYTQSKVRSWWASLVRD 277 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~-~~~~Dftnp~a~~ww~~~~~~ 277 (475)
..++|+.+|++|+|+++.++..... ..++ ..-+.++++++|++..+..+... -...-++ ..-++.-.+++++
T Consensus 46 lge~v~a~h~~Girv~ay~~~~~d~----~~~~--~HPeW~~~~~~G~~~~~~~~~~~~~~~~c~n-s~Y~e~~~~~i~E 118 (132)
T PF14871_consen 46 LGEQVEACHERGIRVPAYFDFSWDE----DAAE--RHPEWFVRDADGRPMRGERFGYPGWYTCCLN-SPYREFLLEQIRE 118 (132)
T ss_pred HHHHHHHHHHCCCEEEEEEeeecCh----HHHH--hCCceeeECCCCCCcCCCCcCCCCceecCCC-ccHHHHHHHHHHH
Confidence 4899999999999999999877322 1232 33467889999986322211111 1223343 4456888888888
Q ss_pred hhh-CCccEEEecC
Q 046216 278 FVY-NGVDGIWNDM 290 (475)
Q Consensus 278 ~~~-~G~dg~w~D~ 290 (475)
+++ .++||+|+||
T Consensus 119 i~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 119 ILDRYDVDGIFFDI 132 (132)
T ss_pred HHHcCCCCEEEecC
Confidence 875 8999999997
No 31
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=96.15 E-value=0.0073 Score=63.46 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHhhcccc--------------ccc-cCC---Cccceee------c--------eeEee-------c---
Q 046216 153 TSPTAVLVSLSHAVDNFL--------------CHS-SLF---HDFHVQS------G--------NIIHI-------I--- 190 (475)
Q Consensus 153 ~tp~~vi~~y~~l~G~~~--------------~rw-~Y~---~~~~v~e------~--------D~~Wf-------~--- 190 (475)
+....+.+.|+++++.+. |.| +|. +.++++| | |--|| +
T Consensus 265 qgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~akk~gvE~FvlDDGwfg~rndd~~slG 344 (687)
T COG3345 265 QGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAKKFGVELFVLDDGWFGGRNDDLKSLG 344 (687)
T ss_pred CCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHhhcCeEEEEEccccccccCcchhhhh
Confidence 466789999999987531 777 332 3344443 1 55575 2
Q ss_pred -c--CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHH
Q 046216 191 -C--SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSK 266 (475)
Q Consensus 191 -~--~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~ 266 (475)
| +.++||. .++|++.++++|+++.+|+-|.+...++ ++|++ .-|..|| .+|.|... ..+....|+.||.
T Consensus 345 DWlv~seKfPsgiE~li~~I~e~Gl~fGIWlePemvs~dS-dlfrq--HPDWvvk-~~G~p~~~---~Rnqyvl~~s~p~ 417 (687)
T COG3345 345 DWLVNSEKFPSGIEELIEAIAENGLIFGIWLEPEMVSEDS-DLFRQ--HPDWVVK-VNGYPLMA---GRNQYVLWLSNPI 417 (687)
T ss_pred ceecchhhccccHHHHHHHHHHcCCccceeecchhcccch-HHHhh--CCCeEEe-cCCccccc---cccchhhhccChH
Confidence 3 6899998 8999999999999999999999765443 57753 3466777 67765432 1234556777777
Q ss_pred HHHHHHHHHHH-hhhCCccEEEecCC
Q 046216 267 VRSWWASLVRD-FVYNGVDGIWNDMN 291 (475)
Q Consensus 267 a~~ww~~~~~~-~~~~G~dg~w~D~~ 291 (475)
....-.+.+.. +...-||-++-|||
T Consensus 418 vv~~l~~~l~qll~~~~v~ylkwdmn 443 (687)
T COG3345 418 VVLDLSEDLVQLLLFHLVSYLKWDMN 443 (687)
T ss_pred HHHHhhhHHHHHHHhhhHHHHHHHhC
Confidence 66654444432 33344566666665
No 32
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=95.29 E-value=0.041 Score=54.30 Aligned_cols=95 Identities=23% Similarity=0.374 Sum_probs=56.9
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCcc----ccccCCCCceeeeC-------------CCCCCeeeeecC----C
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYF----VYDSGPKIDVWIRK-------------PDGTPFIGEVWP----G 255 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~----~y~~g~~~~~~v~~-------------~~G~~~~~~~w~----g 255 (475)
+.++||+++|++|+|+|+=+-+ +...+..+. .+......++++.. .++..+....|. .
T Consensus 53 d~~~Lv~~~h~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (316)
T PF00128_consen 53 DFKELVDAAHKRGIKVILDVVPNHTSDDHPWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQF 132 (316)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETSEEETTSHHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSS
T ss_pred hhhhhhhccccccceEEEeeeccccccccccccccccccccccccceeeccccccccccccccccccccccccccccccc
Confidence 4689999999999999985444 333322110 00011122333311 112222222222 1
Q ss_pred --ccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCC
Q 046216 256 --PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK 292 (475)
Q Consensus 256 --~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E 292 (475)
...-+|+.||++++...+.++.+++.|||||=+|...
T Consensus 133 ~~~~~dln~~n~~v~~~i~~~~~~w~~~giDGfR~D~~~ 171 (316)
T PF00128_consen 133 WSDLPDLNYENPEVREYIIDVLKFWIEEGIDGFRLDAAK 171 (316)
T ss_dssp STTSEEBETTSHHHHHHHHHHHHHHHHTTESEEEETTGG
T ss_pred ccccchhhhhhhhhhhhhcccccchhhceEeEEEEcccc
Confidence 1234678899999999998888999999999999743
No 33
>PRK03705 glycogen debranching enzyme; Provisional
Probab=95.27 E-value=0.077 Score=58.78 Aligned_cols=91 Identities=18% Similarity=0.234 Sum_probs=57.6
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccC---CCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHE---DGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWAS 273 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~---~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~ 273 (475)
+.++||+++|++|+++|+=+-. +.... ..+..++......++..+.+|. | ..|.+...-+++.||.++++..+
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~-~--~~~~g~g~~ln~~~p~Vr~~iid 319 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSLRGIDNRSYYWIREDGD-Y--HNWTGCGNTLNLSHPAVVDWAID 319 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhcccCCCccceEECCCCC-c--CCCCCccCcccCCCHHHHHHHHH
Confidence 4789999999999999874322 22210 1111121111223444444443 2 23444444578889999999999
Q ss_pred HHHHhhh-CCccEEEecCC
Q 046216 274 LVRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 274 ~~~~~~~-~G~dg~w~D~~ 291 (475)
.++.+++ .|||||=+|..
T Consensus 320 ~l~~W~~e~gVDGFRfD~a 338 (658)
T PRK03705 320 CLRYWVETCHVDGFRFDLA 338 (658)
T ss_pred HHHHHHHHhCCCEEEEEcH
Confidence 9999885 79999999953
No 34
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=94.94 E-value=0.09 Score=62.25 Aligned_cols=93 Identities=18% Similarity=0.228 Sum_probs=58.2
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCccc--cccCCCC-ceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFV--YDSGPKI-DVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWAS 273 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~--y~~g~~~-~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~ 273 (475)
+.++||+++|++|+++|+=+-+ +...+..+.. -..+.+. .||-.+. +.+..-..|-|....+|+.+|.++++..+
T Consensus 248 efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~-~~~~~y~~~~G~gn~~n~~~p~v~~~i~d 326 (1221)
T PRK14510 248 EFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEP-GNPKEYENWWGCGNLPNLERPFILRLPMD 326 (1221)
T ss_pred HHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecC-CCCCcccCCCCCCCccccCCHHHHHHHHH
Confidence 5789999999999999884333 2222211110 0011122 2222221 11111123446556789999999999999
Q ss_pred HHHHhhhCCccEEEecCC
Q 046216 274 LVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 274 ~~~~~~~~G~dg~w~D~~ 291 (475)
.++.+++.|||||=+|..
T Consensus 327 ~lr~Wv~~gVDGfRfDla 344 (1221)
T PRK14510 327 VLRSWAKRGVDGFRLDLA 344 (1221)
T ss_pred HHHHHHHhCCCEEEEech
Confidence 999988899999999954
No 35
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=94.80 E-value=0.091 Score=57.08 Aligned_cols=92 Identities=20% Similarity=0.267 Sum_probs=56.5
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCcccccc------CCCCceeeeCCCCCCeee----------eecCC-----
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDS------GPKIDVWIRKPDGTPFIG----------EVWPG----- 255 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~------g~~~~~~v~~~~G~~~~~----------~~w~g----- 255 (475)
+.++||+++|++|+|+|+=+-+ ++..+. +.|.+ ..-.++|+....+..+.+ ..|..
T Consensus 77 df~~Lv~~ah~~Gi~vilD~V~NH~s~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 154 (539)
T TIGR02456 77 DFKDFVDEAHARGMRVIIDLVLNHTSDQH--PWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAK 154 (539)
T ss_pred HHHHHHHHHHHCCCEEEEEeccCcCCCCC--HHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcC
Confidence 4689999999999999884333 333222 11211 112345543322221111 11210
Q ss_pred ---------ccccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCC
Q 046216 256 ---------PCAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 256 ---------~~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
...-+|+.||++++...+.++.+++.|||||=+|..
T Consensus 155 ~~y~~~f~~~~pdln~~np~vr~~l~~~~~~w~~~GvDGfRlDav 199 (539)
T TIGR02456 155 QYYWHRFFSHQPDLNYDNPAVHDAVHDVMRFWLDLGVDGFRLDAV 199 (539)
T ss_pred eeEEecccCCCCccCCCCHHHHHHHHHHHHHHHHcCCCEEEEecH
Confidence 112367789999999999999999999999999974
No 36
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=94.65 E-value=0.14 Score=56.42 Aligned_cols=89 Identities=19% Similarity=0.178 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCccccccCCCCceeee-CCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDSGPKIDVWIR-KPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~g~~~~~~v~-~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
+.++||+++|++|+++|+=+-+ +..... ...|+... .++|.. +.+|.... +.|...-++..||+++++..+.+
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~~-~~~f~~~~-~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~v~~~i~~~~ 304 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSRE-ESPFEKTV-PGYYYRYNEDGTLSN---GTGVGNDTASEREMMRKFIVDSV 304 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCCC-CCcccCCC-CCeeEEECCCCCccC---CCcccCCcccCCHHHHHHHHHHH
Confidence 4789999999999999884332 332211 12343222 234433 44443211 11222246778999999999999
Q ss_pred HHhhh-CCccEEEecCC
Q 046216 276 RDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 276 ~~~~~-~G~dg~w~D~~ 291 (475)
+.+++ .|||||=+|..
T Consensus 305 ~~W~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 305 LYWVKEYNIDGFRFDLM 321 (605)
T ss_pred HHHHHHcCCCEEEEech
Confidence 98875 89999999965
No 37
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=94.48 E-value=0.17 Score=56.50 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCC---ccccccCCCC-ceeeeCCCC-CCeeeeecCCccccCCCCCHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDG---YFVYDSGPKI-DVWIRKPDG-TPFIGEVWPGPCAFPDYTQSKVRSWW 271 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~---y~~y~~g~~~-~~~v~~~~G-~~~~~~~w~g~~~~~Dftnp~a~~ww 271 (475)
+.++||+++|++|++||+=+-. +...... ...+. +... .+|-.+.+. ..|. .|.|...-+|+.+|.++++.
T Consensus 246 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~-~~d~~~yy~~~~~~~~~~~--~~~g~gn~ln~~~p~vr~~i 322 (688)
T TIGR02100 246 EFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFR-GIDNASYYRLQPDDKRYYI--NDTGTGNTLNLSHPRVLQMV 322 (688)
T ss_pred HHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCccccc-CCCCCcceEecCCCCceec--CCCCccccccCCCHHHHHHH
Confidence 5789999999999999884433 2221110 00111 1112 233223221 1121 23233345899999999999
Q ss_pred HHHHHHhh-hCCccEEEecCCC
Q 046216 272 ASLVRDFV-YNGVDGIWNDMNK 292 (475)
Q Consensus 272 ~~~~~~~~-~~G~dg~w~D~~E 292 (475)
.+.++.++ +.|||||=+|...
T Consensus 323 ~d~l~~W~~e~gIDGfR~D~a~ 344 (688)
T TIGR02100 323 MDSLRYWVTEMHVDGFRFDLAT 344 (688)
T ss_pred HHHHHHHHHHcCCcEEEEechh
Confidence 99999888 5899999999654
No 38
>PRK10785 maltodextrin glucosidase; Provisional
Probab=94.44 E-value=0.13 Score=56.65 Aligned_cols=89 Identities=18% Similarity=0.219 Sum_probs=56.8
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCcccccc-------------CCCCceeeeCCCCCCeeeeecCCccccCC--
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDS-------------GPKIDVWIRKPDGTPFIGEVWPGPCAFPD-- 261 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~-------------g~~~~~~v~~~~G~~~~~~~w~g~~~~~D-- 261 (475)
+.++||+++|++|+|+|+=+-+ +...+.. .|++ ....++|..+.+|. + ..|-|....||
T Consensus 227 df~~Lv~~aH~rGikVilD~V~NH~~~~~~--~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN 301 (598)
T PRK10785 227 ALLRLRHATQQRGMRLVLDGVFNHTGDSHP--WFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLD 301 (598)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCcCCCCCH--HHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCcccc
Confidence 4689999999999999884332 2222221 1211 12234555444442 2 35666555555
Q ss_pred CCCHHHHHHHHH----HHHHhhhC--CccEEEecCC
Q 046216 262 YTQSKVRSWWAS----LVRDFVYN--GVDGIWNDMN 291 (475)
Q Consensus 262 ftnp~a~~ww~~----~~~~~~~~--G~dg~w~D~~ 291 (475)
+.||+++++..+ .++.+++. |||||=+|..
T Consensus 302 ~~np~v~~~l~~~~~~v~~~Wl~~~~giDG~RlDva 337 (598)
T PRK10785 302 FQSEEVVNEIYRGEDSIVRHWLKAPYNIDGWRLDVV 337 (598)
T ss_pred CCCHHHHHHHHhhhhHHHHHhhcCCCCCcEEEEecH
Confidence 678999998664 67777764 9999999976
No 39
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=93.67 E-value=0.3 Score=49.12 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=61.0
Q ss_pred CCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 196 fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
..|++++++.||++|+.+|..|--+ + |.. ..+. .-++-+++.+|+++.. .....|+|-++++++++--+..
T Consensus 60 i~D~~~l~~~l~e~gIY~IARIv~F-k-D~~---la~~-~pe~av~~~~G~~w~d---~~~~~WvnP~~~evw~Y~i~IA 130 (316)
T PF13200_consen 60 IKDLKALVKKLKEHGIYPIARIVVF-K-DPV---LAEA-HPEWAVKTKDGSVWRD---NEGEAWVNPYSKEVWDYNIDIA 130 (316)
T ss_pred ccCHHHHHHHHHHCCCEEEEEEEEe-c-ChH---Hhhh-ChhhEEECCCCCcccC---CCCCccCCCCCHHHHHHHHHHH
Confidence 4799999999999999988765222 1 111 1111 2334456667654321 1235799999999999988888
Q ss_pred HHhhhCCccEEEecCC
Q 046216 276 RDFVYNGVDGIWNDMN 291 (475)
Q Consensus 276 ~~~~~~G~dg~w~D~~ 291 (475)
++..+.|+|.+-+|.=
T Consensus 131 ~Eaa~~GFdEIqfDYI 146 (316)
T PF13200_consen 131 KEAAKLGFDEIQFDYI 146 (316)
T ss_pred HHHHHcCCCEEEeeee
Confidence 8888999999999963
No 40
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=93.59 E-value=0.25 Score=54.55 Aligned_cols=92 Identities=18% Similarity=0.189 Sum_probs=56.6
Q ss_pred CCCC---ChHHHHHHHHHCCCeEEEeeCC-ccccCCCc-cccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHH
Q 046216 194 EHFP---DPKSLATDLHLNGFKAIWMLDP-GIKHEDGY-FVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVR 268 (475)
Q Consensus 194 ~~fP---dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y-~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~ 268 (475)
.+|. +.++||+++|++|+++|+-+-+ +...+... ..|+. ..-++..+... . ....|. ..-.|+.||+++
T Consensus 200 ~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~--~~~y~~~~~~~-~-~~~~w~--~~~~~~~~~~Vr 273 (613)
T TIGR01515 200 SRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGLAEFDG--TPLYEHKDPRD-G-EHWDWG--TLIFDYGRPEVR 273 (613)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchhhccCC--CcceeccCCcc-C-cCCCCC--CceecCCCHHHH
Confidence 4565 4689999999999999986544 33322210 01110 00111111110 0 012242 235689999999
Q ss_pred HHHHHHHHHhhh-CCccEEEecCC
Q 046216 269 SWWASLVRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 269 ~ww~~~~~~~~~-~G~dg~w~D~~ 291 (475)
++..+.++.+++ .|||||=+|.-
T Consensus 274 ~~l~~~~~~W~~ey~iDG~R~D~v 297 (613)
T TIGR01515 274 NFLVANALYWAEFYHIDGLRVDAV 297 (613)
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCH
Confidence 999999999885 79999999973
No 41
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=93.30 E-value=0.35 Score=53.65 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=63.5
Q ss_pred CCCChHHHHHHHHHCCCeEEEe-eCCccccC---CCccccccCCCCc-eeeeCCCCCCeeeeecCCccccCCCCCHHHHH
Q 046216 195 HFPDPKSLATDLHLNGFKAIWM-LDPGIKHE---DGYFVYDSGPKID-VWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRS 269 (475)
Q Consensus 195 ~fPdp~~~v~~L~~~g~k~v~~-v~P~i~~~---~~y~~y~~g~~~~-~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ 269 (475)
+-.+.|.||++||+.|+.||+= |=.+.... ..-..+ ++...+ |+-.+++|.. ..+.|.+--+.-++|-+++
T Consensus 263 ~i~EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f-~~id~~~Yyr~~~dg~~---~N~TGcGNtln~~hpmvrk 338 (697)
T COG1523 263 RIKEFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSF-RGIDPNYYYRLDPDGYY---SNGTGCGNTLNTEHPMVRK 338 (697)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEeccCcccccCcCccccc-ccCCcCceEEECCCCCe---ecCCccCcccccCChHHHH
Confidence 3335689999999999999873 22332210 011123 345555 4445666543 1245555568889999999
Q ss_pred HHHHHHHHhh-hCCccEEEecCCC
Q 046216 270 WWASLVRDFV-YNGVDGIWNDMNK 292 (475)
Q Consensus 270 ww~~~~~~~~-~~G~dg~w~D~~E 292 (475)
|.-+.++.++ +++||||=+|+.-
T Consensus 339 ~ivDsLrYWv~e~hVDGFRFDLa~ 362 (697)
T COG1523 339 LIVDSLRYWVEEYHVDGFRFDLAG 362 (697)
T ss_pred HHHHHHHHHHHHhCCCceeecchh
Confidence 9999999988 4899999999863
No 42
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=93.26 E-value=0.46 Score=48.21 Aligned_cols=155 Identities=23% Similarity=0.293 Sum_probs=94.5
Q ss_pred CCCCCCC-hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHH
Q 046216 192 SFEHFPD-PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSW 270 (475)
Q Consensus 192 ~~~~fPd-p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~w 270 (475)
++++||. .+++.+.+|.+|.|+-+.-|-+-....+| ||. + .+.
T Consensus 102 ~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G~~TC~g~--------------------------PGS---~--~~e----- 145 (414)
T KOG2366|consen 102 DPSRFPSGIKALADYVHSKGLKLGIYSDAGNFTCAGY--------------------------PGS---L--GHE----- 145 (414)
T ss_pred ChhhcccchhhhhhchhhcCCceeeeeccCchhhccC--------------------------Ccc---c--chh-----
Confidence 6999997 68999999999999999877653332222 221 0 000
Q ss_pred HHHHHHHhhhCCccEEEecCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccccchhHHHHHHHHHHhcCCCCcE
Q 046216 271 WASLVRDFVYNGVDGIWNDMNKPAAFKSVTKTMPERNIHRGLDEIGGCQNHLSYHNVYGMPMARSTYEGMRLADKDKCPF 350 (475)
Q Consensus 271 w~~~~~~~~~~G~dg~w~D~~E~~~f~~~~~~~p~~~~~~g~~~~g~~~~~~~~hN~y~~~~~~a~~~~~~~~~~~~r~~ 350 (475)
..--+.|.+-|||-.++|.+.... ..+.-.|+.+ ++ ++ +...||+
T Consensus 146 -~~DA~tFA~WgvDylKlD~C~~~~--------------------------~~~~~~Yp~m-s~----aL---N~tGrpi 190 (414)
T KOG2366|consen 146 -ESDAKTFADWGVDYLKLDGCFNNL--------------------------ITMPEGYPIM-SR----AL---NNTGRPI 190 (414)
T ss_pred -hhhhhhhHhhCCcEEecccccccc--------------------------ccccccchhH-HH----HH---hccCCce
Confidence 001134667899999999875321 1112234432 22 22 2367999
Q ss_pred EEe-cccc---cC---------CCCcceee--CCCCCCChhHHHHHHHHHHHHhhcCCCccccCCCCCCC-------C--
Q 046216 351 VLT-RAGV---IG---------SQRYAATW--TGDNVSNWEHLHMSISMVLQLGLSGQPHSGPDIGGFAG-------N-- 406 (475)
Q Consensus 351 ~~s-Rs~~---~G---------sqry~~~W--~GD~~s~W~~L~~~I~~~L~~~lsG~p~~g~DIgGf~g-------~-- 406 (475)
+.| ++-- .| .+.+...| .+|...||..+.+.|...-...=.=.|.-|+ ||++. +
T Consensus 191 ~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agP--g~WNDpDmL~iGN~G 268 (414)
T KOG2366|consen 191 FYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGP--GGWNDPDMLEIGNGG 268 (414)
T ss_pred EEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCC--CCCCChhHhhcCCCC
Confidence 999 5421 12 23344566 4899999998877766555566666788888 88763 2
Q ss_pred CCHHHHHHHHHhhhh
Q 046216 407 ATPRLFGRWMGIRAV 421 (475)
Q Consensus 407 ~~~EL~~RW~Q~gaf 421 (475)
-+-|++. .||+.+
T Consensus 269 ~s~e~y~--~qf~lW 281 (414)
T KOG2366|consen 269 MSYEEYK--GQFALW 281 (414)
T ss_pred ccHHHHH--HHHHHH
Confidence 3667765 344443
No 43
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=92.94 E-value=0.39 Score=56.01 Aligned_cols=86 Identities=21% Similarity=0.273 Sum_probs=57.7
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCccccccCCCCcee-eeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDSGPKIDVW-IRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~g~~~~~~-v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
+.++||+.||++|+++|+=|-+ +.... ..|+... .+|| ..+.+|.+.. .|.| .-++..||.++++..+.+
T Consensus 556 EfK~LV~alH~~GI~VILDVVyNHt~~~---~~f~~~~-p~Yy~~~~~~G~~~~--~~~g--~~l~~e~~~vrk~iiDsl 627 (1111)
T TIGR02102 556 EFKNLINEIHKRGMGVILDVVYNHTAKV---YIFEDLE-PNYYHFMDADGTPRT--SFGG--GRLGTTHEMSRRILVDSI 627 (1111)
T ss_pred HHHHHHHHHHHCCCEEEEeccccccccc---ccccccC-CCceEeeCCCCCccc--ccCC--CCCCcCCHHHHHHHHHHH
Confidence 4789999999999999884322 22222 1343322 2344 3445665432 2333 346788999999999999
Q ss_pred HHhhh-CCccEEEecCC
Q 046216 276 RDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 276 ~~~~~-~G~dg~w~D~~ 291 (475)
+.+++ .|||||=+|+.
T Consensus 628 ~yWv~ey~VDGFRfDl~ 644 (1111)
T TIGR02102 628 KYLVDEFKVDGFRFDMM 644 (1111)
T ss_pred HHHHHhcCCcEEEEecc
Confidence 98874 89999999964
No 44
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=92.86 E-value=0.4 Score=48.30 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=55.7
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHh
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~ 278 (475)
.+.||++-|++|+++-.|+...+............. ..+.++..|....-..-.+...++|-.+|+++++-.+.++++
T Consensus 72 L~~~I~eaHkrGlevHAW~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Ei 149 (311)
T PF02638_consen 72 LEFMIEEAHKRGLEVHAWFRVGFNAPDVSHILKKHP--EWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEI 149 (311)
T ss_pred HHHHHHHHHHcCCEEEEEEEeecCCCchhhhhhcCc--hhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHH
Confidence 478999999999999999843333221111111111 111212222111100012456789999999999999999998
Q ss_pred h-hCCccEEEec
Q 046216 279 V-YNGVDGIWND 289 (475)
Q Consensus 279 ~-~~G~dg~w~D 289 (475)
+ ++.|||+=+|
T Consensus 150 v~~YdvDGIhlD 161 (311)
T PF02638_consen 150 VKNYDVDGIHLD 161 (311)
T ss_pred HhcCCCCeEEec
Confidence 7 5799999999
No 45
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=92.71 E-value=0.31 Score=54.52 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=60.0
Q ss_pred CCCCC---hHHHHHHHHHCCCeEEEeeCC-ccccCC--CccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHH
Q 046216 194 EHFPD---PKSLATDLHLNGFKAIWMLDP-GIKHED--GYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKV 267 (475)
Q Consensus 194 ~~fPd---p~~~v~~L~~~g~k~v~~v~P-~i~~~~--~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a 267 (475)
.+|.. .+.||+++|++|+++|+=+-+ ++..+. +...|+ +....||-.+..|. ...|. +...|+.++++
T Consensus 294 ~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~gl~~fD-g~~~~Yf~~~~~g~---~~~w~--~~~~N~~~~eV 367 (758)
T PLN02447 294 SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDGLNGFD-GTDGSYFHSGPRGY---HWLWD--SRLFNYGNWEV 367 (758)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeccccccccccccccccC-CCCccccccCCCCC---cCcCC--CceecCCCHHH
Confidence 45544 589999999999999984433 333221 111232 22233443332221 12342 33589999999
Q ss_pred HHHHHHHHHHhhh-CCccEEEecCCC
Q 046216 268 RSWWASLVRDFVY-NGVDGIWNDMNK 292 (475)
Q Consensus 268 ~~ww~~~~~~~~~-~G~dg~w~D~~E 292 (475)
+++..+.++.+++ .+||||=+|.-.
T Consensus 368 r~fLl~~~~~Wl~ey~IDGfRfDaV~ 393 (758)
T PLN02447 368 LRFLLSNLRWWLEEYKFDGFRFDGVT 393 (758)
T ss_pred HHHHHHHHHHHHHHhCcccccccchh
Confidence 9999999998885 799999999754
No 46
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=92.68 E-value=0.46 Score=51.74 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=29.7
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCC
Q 046216 259 FPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK 292 (475)
Q Consensus 259 ~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E 292 (475)
-+|+.||++++...+.++.+++.|||||=+|...
T Consensus 170 dLn~~np~V~~~l~~~~~~W~~~GvDGfRlDa~~ 203 (551)
T PRK10933 170 DLNWENPAVRAELKKVCEFWADRGVDGLRLDVVN 203 (551)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHCCCcEEEEcchh
Confidence 4567899999999999999899999999999654
No 47
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=92.33 E-value=0.27 Score=49.45 Aligned_cols=83 Identities=19% Similarity=0.246 Sum_probs=54.8
Q ss_pred HHHHHHHHHCCCeEEEeeCCccccCCCccc-cccCC---CCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 200 KSLATDLHLNGFKAIWMLDPGIKHEDGYFV-YDSGP---KIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 200 ~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~-y~~g~---~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
++-++.||+.|.+++..+.-+-.. .|-. |.+.. ...++ |.. ...|||. .++|+.+|+-++...+++
T Consensus 84 ~~~i~~Lk~~g~~viaYlSvGe~E--~~R~y~~~~~~~~~~~~l-----~~~--n~~W~g~-~~vd~~~~~W~~il~~rl 153 (315)
T TIGR01370 84 PEEIVRAAAAGRWPIAYLSIGAAE--DYRFYWQKGWKVNAPAWL-----GNE--DPDWPGN-YDVKYWDPEWKAIAFSYL 153 (315)
T ss_pred HHHHHHHHhCCcEEEEEEEchhcc--ccchhhhhhhhcCCHHHh-----CCC--CCCCCCc-eeEecccHHHHHHHHHHH
Confidence 567888999999988776533222 1212 22110 01111 111 2349885 789999999888888888
Q ss_pred HHhhhCCccEEEecCCC
Q 046216 276 RDFVYNGVDGIWNDMNK 292 (475)
Q Consensus 276 ~~~~~~G~dg~w~D~~E 292 (475)
+.+.+.|+||+.+|.-+
T Consensus 154 ~~l~~kGfDGvfLD~lD 170 (315)
T TIGR01370 154 DRVIAQGFDGVYLDLID 170 (315)
T ss_pred HHHHHcCCCeEeeccch
Confidence 88889999999999643
No 48
>PLN03244 alpha-amylase; Provisional
Probab=92.28 E-value=0.42 Score=53.22 Aligned_cols=87 Identities=17% Similarity=0.210 Sum_probs=56.8
Q ss_pred hHHHHHHHHHCCCeEEEeeCC-ccccCC--CccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDP-GIKHED--GYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P-~i~~~~--~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
.+.||+++|++|++||+=+-+ +...+. +...|+ |...-||-.+..|. ...| | +...|+.+|+++++.-+.+
T Consensus 443 LK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fD-Gt~~~Yf~~~~~g~---~~~W-G-s~~fnyg~~EVr~FLLsna 516 (872)
T PLN03244 443 FKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFD-GSNDCYFHTGKRGH---HKHW-G-TRMFKYGDLDVLHFLISNL 516 (872)
T ss_pred HHHHHHHHHHCCCEEEEEecCccCCCccccchhhcC-CCccceeccCCCCc---cCCC-C-CceecCCCHHHHHHHHHHH
Confidence 579999999999999984433 343332 111122 22222333222221 2356 3 3567999999999999999
Q ss_pred HHhh-hCCccEEEecCC
Q 046216 276 RDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 276 ~~~~-~~G~dg~w~D~~ 291 (475)
+.++ +.+||||=+|.-
T Consensus 517 ~yWleEyhIDGFRfDaV 533 (872)
T PLN03244 517 NWWITEYQIDGFQFHSL 533 (872)
T ss_pred HHHHHHhCcCcceeecc
Confidence 9887 589999999954
No 49
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=92.21 E-value=0.41 Score=52.04 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=52.9
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCcc-ccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCH---HHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYF-VYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQS---KVRSWWA 272 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~-~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp---~a~~ww~ 272 (475)
+.++||+.+|++|+++|+=+-+ +...+..|. .| ..+|-.+ . ...|.. -+|+.+| +++++..
T Consensus 161 e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-----~~y~~~~-~-----~~~wg~---~~n~~~~~~~~vr~~i~ 226 (542)
T TIGR02402 161 DLKALVDAAHGLGLGVILDVVYNHFGPEGNYLPRY-----APYFTDR-Y-----STPWGA---AINFDGPGSDEVRRYIL 226 (542)
T ss_pred HHHHHHHHHHHCCCEEEEEEccCCCCCcccccccc-----CccccCC-C-----CCCCCC---ccccCCCcHHHHHHHHH
Confidence 3689999999999999884433 333322221 11 1133211 1 123422 3799999 9999999
Q ss_pred HHHHHhhh-CCccEEEecCC
Q 046216 273 SLVRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 273 ~~~~~~~~-~G~dg~w~D~~ 291 (475)
+.++.+++ .|||||=+|..
T Consensus 227 ~~~~~W~~e~~iDGfR~D~~ 246 (542)
T TIGR02402 227 DNALYWLREYHFDGLRLDAV 246 (542)
T ss_pred HHHHHHHHHhCCcEEEEeCH
Confidence 98988874 79999999965
No 50
>PRK12313 glycogen branching enzyme; Provisional
Probab=91.94 E-value=0.56 Score=52.06 Aligned_cols=88 Identities=24% Similarity=0.297 Sum_probs=53.9
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCc-cccccCCCCcee-eeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGY-FVYDSGPKIDVW-IRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASL 274 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y-~~y~~g~~~~~~-v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~ 274 (475)
+.++||+++|++|+++|+=+-+ +...+... ..|+ + ..++ ..+... .+ ...|.. .-+|+.||+++++..+.
T Consensus 221 d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~~-~--~~~~~~~~~~~-~~-~~~w~~--~~~n~~~~~vr~~l~~~ 293 (633)
T PRK12313 221 DFMYLVDALHQNGIGVILDWVPGHFPKDDDGLAYFD-G--TPLYEYQDPRR-AE-NPDWGA--LNFDLGKNEVRSFLISS 293 (633)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCcccccccC-C--CcceeecCCCC-Cc-CCCCCC--cccCCCCHHHHHHHHHH
Confidence 3689999999999999984433 33222110 0111 0 0011 011110 11 113432 35789999999999999
Q ss_pred HHHhhh-CCccEEEecCCC
Q 046216 275 VRDFVY-NGVDGIWNDMNK 292 (475)
Q Consensus 275 ~~~~~~-~G~dg~w~D~~E 292 (475)
++.+++ .|||||=+|...
T Consensus 294 ~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 294 ALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred HHHHHHHhCCcEEEEcChh
Confidence 988885 799999999753
No 51
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=91.84 E-value=0.6 Score=50.79 Aligned_cols=93 Identities=24% Similarity=0.331 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCCccccccC-----CCCceeee-CCCCCC-------eeeeecCCc-------
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDSG-----PKIDVWIR-KPDGTP-------FIGEVWPGP------- 256 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~g-----~~~~~~v~-~~~G~~-------~~~~~w~g~------- 256 (475)
+.+.||+++|++|+|+|+=+-+ +...+.. .+.++ .-.++|+- +..|.+ +-+..|...
T Consensus 76 ~~~~lv~~ah~~gi~vilD~v~NH~~~~~~--~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y 153 (543)
T TIGR02403 76 DFEELVSEAKKRNIKIMLDMVFNHTSTEHE--WFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYY 153 (543)
T ss_pred HHHHHHHHHHHCCCEEEEEECccccccchH--HHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceE
Confidence 4689999999999999884433 3332221 12211 11234332 111211 111223221
Q ss_pred -------cccCCCCCHHHHHHHHHHHHHhhhCCccEEEecCCC
Q 046216 257 -------CAFPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMNK 292 (475)
Q Consensus 257 -------~~~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~E 292 (475)
..-+|+.||++++...+.++.+++.|||||=+|...
T Consensus 154 ~~~f~~~~pdln~~np~v~~~i~~~~~~W~~~giDGfRlDa~~ 196 (543)
T TIGR02403 154 LHLFDKTQADLNWENPEVREELKDVVNFWRDKGVDGFRLDVIN 196 (543)
T ss_pred EeccCCcCCccCCCCHHHHHHHHHHHHHHHHcCCCEEEEeeeh
Confidence 123667899999999998888889999999999653
No 52
>PLN00196 alpha-amylase; Provisional
Probab=91.83 E-value=0.79 Score=48.29 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=54.3
Q ss_pred cCCCCCCC---hHHHHHHHHHCCCeEEEeeC-CccccCC-----CccccccCCC---Ccee---eeCCCCCCee---e--
Q 046216 191 CSFEHFPD---PKSLATDLHLNGFKAIWMLD-PGIKHED-----GYFVYDSGPK---IDVW---IRKPDGTPFI---G-- 250 (475)
Q Consensus 191 ~~~~~fPd---p~~~v~~L~~~g~k~v~~v~-P~i~~~~-----~y~~y~~g~~---~~~~---v~~~~G~~~~---~-- 250 (475)
.++.+|-. .++||+++|++|+|+|+=+- -+...+. .|..+..+.. .+.+ +.. +.+.+. +
T Consensus 83 ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~y~~~~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~ 161 (428)
T PLN00196 83 LDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICR-DDTQYSDGTGNL 161 (428)
T ss_pred CCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCcccccccCCCceEECCCCCCCCccccccccCCC-CcccccCCCCce
Confidence 35557764 68999999999999987332 2222211 1211221111 1111 000 000010 1
Q ss_pred eecCCcccc--CCCCCHHHHHHHHHHHHHhh-hCCccEEEecCC
Q 046216 251 EVWPGPCAF--PDYTQSKVRSWWASLVRDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 251 ~~w~g~~~~--~Dftnp~a~~ww~~~~~~~~-~~G~dg~w~D~~ 291 (475)
..|.+.... +|..||+++++..+.++-+. +.|||||=+|..
T Consensus 162 ~~~~~~~~lpDLn~~np~V~~~l~~~~~wl~~~~GiDG~RlD~a 205 (428)
T PLN00196 162 DTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDAWRLDFA 205 (428)
T ss_pred eCCCCCCCCCccCCCCHHHHHHHHHHHHHHhhCCCCCEEEeehh
Confidence 112222344 45678999999888776665 589999999975
No 53
>PRK14706 glycogen branching enzyme; Provisional
Probab=91.48 E-value=0.59 Score=51.78 Aligned_cols=92 Identities=21% Similarity=0.196 Sum_probs=55.1
Q ss_pred CCCC---ChHHHHHHHHHCCCeEEEeeCC-ccccCCCccccccCCCCceeeeCC-CCCCeeeeecCCccccCCCCCHHHH
Q 046216 194 EHFP---DPKSLATDLHLNGFKAIWMLDP-GIKHEDGYFVYDSGPKIDVWIRKP-DGTPFIGEVWPGPCAFPDYTQSKVR 268 (475)
Q Consensus 194 ~~fP---dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~y~~y~~g~~~~~~v~~~-~G~~~~~~~w~g~~~~~Dftnp~a~ 268 (475)
.+|- +.+.||+++|++|+++|+=+-+ +...+.....+-.+.. -+...+. .|. ...|. +...|+.+|+++
T Consensus 211 ~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~~l~~~dg~~-~y~~~~~~~g~---~~~w~--~~~~~~~~~eVr 284 (639)
T PRK14706 211 SRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDESGLAHFDGGP-LYEYADPRKGY---HYDWN--TYIFDYGRNEVV 284 (639)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecccccCcchhhhhccCCCc-ceeccCCcCCc---CCCCC--CcccCCCCHHHH
Confidence 4554 3589999999999999984433 3322211100000100 0101111 110 12342 234799999999
Q ss_pred HHHHHHHHHhh-hCCccEEEecCC
Q 046216 269 SWWASLVRDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 269 ~ww~~~~~~~~-~~G~dg~w~D~~ 291 (475)
++..+.++.++ +.+||||=+|.-
T Consensus 285 ~~l~~~~~~W~~e~~iDG~R~Dav 308 (639)
T PRK14706 285 MFLIGSALKWLQDFHVDGLRVDAV 308 (639)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeee
Confidence 99999998887 589999999964
No 54
>PLN02960 alpha-amylase
Probab=91.39 E-value=0.64 Score=52.56 Aligned_cols=87 Identities=17% Similarity=0.149 Sum_probs=56.5
Q ss_pred hHHHHHHHHHCCCeEEEeeC-CccccCCC--ccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 199 PKSLATDLHLNGFKAIWMLD-PGIKHEDG--YFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~-P~i~~~~~--y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
.+.||+++|++|+++|+=+- -+...+.. ...|+ +...-++-.+..| ....|. +..+|+.+|+++++..+.+
T Consensus 468 fk~LVd~aH~~GI~VILDvV~NH~~~d~~~~L~~FD-G~~~~Yf~~~~~g---~~~~WG--~~~fNy~~~eVr~fLlsna 541 (897)
T PLN02960 468 FKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFD-GSNDCYFHSGKRG---HHKRWG--TRMFKYGDHEVLHFLLSNL 541 (897)
T ss_pred HHHHHHHHHHCCCEEEEEecccccCCccccchhhcC-CCccceeecCCCC---ccCCCC--CcccCCCCHHHHHHHHHHH
Confidence 57999999999999998443 33444321 11232 2111233222222 123463 2468999999999999999
Q ss_pred HHhh-hCCccEEEecCC
Q 046216 276 RDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 276 ~~~~-~~G~dg~w~D~~ 291 (475)
+.++ +.+||||=+|.-
T Consensus 542 ~yWl~EyhIDGfR~DAV 558 (897)
T PLN02960 542 NWWVTEYRVDGFQFHSL 558 (897)
T ss_pred HHHHHHHCCCceeeccc
Confidence 9887 579999999954
No 55
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.09 E-value=0.48 Score=49.27 Aligned_cols=90 Identities=19% Similarity=0.172 Sum_probs=59.9
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCee-eeecCCccccCCCCCHHHHHHHHHHHHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFI-GEVWPGPCAFPDYTQSKVRSWWASLVRD 277 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~-~~~w~g~~~~~Dftnp~a~~ww~~~~~~ 277 (475)
.+.+|++-|++|++++.|++|+......- ... ..........+.|..|. +.-|- ...++|=.+|++++|..+.+-+
T Consensus 117 La~~I~~AHkr~l~v~aWf~~~~~a~~~s-~~~-~~~p~~~~~~~~~~~~~~~~~~~-~~~~ldPg~Pevq~~i~~lv~e 193 (418)
T COG1649 117 LAFVIAEAHKRGLEVHAWFNPYRMAPPTS-PLT-KRHPHWLTTKRPGWVYVRHQGWG-KRVWLDPGIPEVQDFITSLVVE 193 (418)
T ss_pred HHHHHHHHHhcCCeeeechhhcccCCCCC-hhH-hhCCCCcccCCCCeEEEecCCce-eeeEeCCCChHHHHHHHHHHHH
Confidence 47899999999999999999997642110 010 01112222233343332 11111 5678999999999999999988
Q ss_pred hh-hCCccEEEecCC
Q 046216 278 FV-YNGVDGIWNDMN 291 (475)
Q Consensus 278 ~~-~~G~dg~w~D~~ 291 (475)
++ ++.|||+-+|-=
T Consensus 194 vV~~YdvDGIQfDd~ 208 (418)
T COG1649 194 VVRNYDVDGIQFDDY 208 (418)
T ss_pred HHhCCCCCceeccee
Confidence 77 589999999853
No 56
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=90.95 E-value=1 Score=48.17 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=27.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-CCccEEEecCCC
Q 046216 260 PDYTQSKVRSWWASLVRDFVY-NGVDGIWNDMNK 292 (475)
Q Consensus 260 ~Dftnp~a~~ww~~~~~~~~~-~G~dg~w~D~~E 292 (475)
+|..||++++...+.++.+++ .|||||=+|...
T Consensus 203 Ln~~np~V~~~l~~~~~~w~~~~giDGfRlDavk 236 (479)
T PRK09441 203 IDFRHPEVREELKYWAKWYMETTGFDGFRLDAVK 236 (479)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhhc
Confidence 345689999998888888887 899999999654
No 57
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=90.84 E-value=0.86 Score=52.15 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHCCCeEEEee-CCccccCCC--ccccccCCCCceeeeC-CCCCCeeeeecCCccccCCCCCHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWML-DPGIKHEDG--YFVYDSGPKIDVWIRK-PDGTPFIGEVWPGPCAFPDYTQSKVRSWWAS 273 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v-~P~i~~~~~--y~~y~~g~~~~~~v~~-~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~ 273 (475)
+.++||+.||++|+++|+=| -.+...... ...++.. ..+||.+. .+|....+.++ .-.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~-~P~YY~r~~~~G~~~n~~~~----~d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKI-VPGYYHRLNEDGGVENSTCC----SNTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCccccccc-CcHhhEeeCCCCCeecCCCC----cCCCCCCHHHHHHHHH
Confidence 57899999999999998733 222222110 0112211 12455432 23432112222 2246789999999999
Q ss_pred HHHHhh-hCCccEEEecCC
Q 046216 274 LVRDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 274 ~~~~~~-~~G~dg~w~D~~ 291 (475)
.++.++ +.|||||=+|.-
T Consensus 480 sl~~W~~ey~VDGFRfDlm 498 (898)
T TIGR02103 480 SLVVWAKDYKVDGFRFDLM 498 (898)
T ss_pred HHHHHHHHcCCCEEEEech
Confidence 999887 589999999954
No 58
>PRK14705 glycogen branching enzyme; Provisional
Probab=89.51 E-value=0.96 Score=53.36 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=56.3
Q ss_pred CCCCC---hHHHHHHHHHCCCeEEEeeCC-ccccCCC-ccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHH
Q 046216 194 EHFPD---PKSLATDLHLNGFKAIWMLDP-GIKHEDG-YFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVR 268 (475)
Q Consensus 194 ~~fPd---p~~~v~~L~~~g~k~v~~v~P-~i~~~~~-y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~ 268 (475)
.+|-. .+.||+++|++|+++|+=+-| +...+.- ...|+. ..+....|...-....|.. ...|+.+|+++
T Consensus 809 ~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~~l~~fdg----~~~y~~~d~~~g~~~~Wg~--~~fn~~~~eVr 882 (1224)
T PRK14705 809 SRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSWALAQFDG----QPLYEHADPALGEHPDWGT--LIFDFGRTEVR 882 (1224)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcchhhhhhcCC----CcccccCCcccCCCCCCCC--ceecCCCHHHH
Confidence 45554 579999999999999984444 3322210 001110 0011111111001234643 34799999999
Q ss_pred HHHHHHHHHhhh-CCccEEEecCC
Q 046216 269 SWWASLVRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 269 ~ww~~~~~~~~~-~G~dg~w~D~~ 291 (475)
++..+..+.+++ .+||||=+|.-
T Consensus 883 ~fli~~a~~Wl~eyhiDGfR~Dav 906 (1224)
T PRK14705 883 NFLVANALYWLDEFHIDGLRVDAV 906 (1224)
T ss_pred HHHHHHHHHHHHHhCCCcEEEeeh
Confidence 999999988885 79999999974
No 59
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=89.45 E-value=1.3 Score=47.17 Aligned_cols=32 Identities=25% Similarity=0.387 Sum_probs=29.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCCccEEEecCC
Q 046216 260 PDYTQSKVRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 260 ~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
+++.||+++++..+.++.+++.|||||=+|--
T Consensus 169 ln~~n~~v~~~~~~~~~~W~~~gvDGfRlDa~ 200 (505)
T COG0366 169 LNWENPEVREELLDVVKFWLDKGVDGFRLDAA 200 (505)
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCCeEEeccH
Confidence 68999999999888888899999999999964
No 60
>PRK05402 glycogen branching enzyme; Provisional
Probab=89.15 E-value=1.6 Score=49.24 Aligned_cols=87 Identities=18% Similarity=0.262 Sum_probs=52.8
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCC-ccccccCCCCceeeeCC-CCCCeeeeecCCccccCCCCCHHHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDG-YFVYDSGPKIDVWIRKP-DGTPFIGEVWPGPCAFPDYTQSKVRSWWASL 274 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~-y~~y~~g~~~~~~v~~~-~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~ 274 (475)
+.+.||+++|++|+++|+=+-+ +...+.. ...|+ +. .-+...+. .|. ...|.+ ...|+.||+++++..+.
T Consensus 316 dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~-~~-~~y~~~~~~~~~---~~~w~~--~~~n~~~~~v~~~l~~~ 388 (726)
T PRK05402 316 DFRYFVDACHQAGIGVILDWVPAHFPKDAHGLARFD-GT-ALYEHADPREGE---HPDWGT--LIFNYGRNEVRNFLVAN 388 (726)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCccchhccC-CC-cceeccCCcCCc---cCCCCC--ccccCCCHHHHHHHHHH
Confidence 3589999999999999984433 2322211 00111 00 00111111 010 112432 35799999999999999
Q ss_pred HHHhhh-CCccEEEecCC
Q 046216 275 VRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 275 ~~~~~~-~G~dg~w~D~~ 291 (475)
++.+++ .|||||=+|.-
T Consensus 389 ~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 389 ALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred HHHHHHHhCCcEEEECCH
Confidence 888885 79999999964
No 61
>PRK12568 glycogen branching enzyme; Provisional
Probab=88.82 E-value=1.6 Score=48.88 Aligned_cols=92 Identities=13% Similarity=0.236 Sum_probs=55.8
Q ss_pred CCCCC---hHHHHHHHHHCCCeEEEeeCCc-cccCC-CccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHH
Q 046216 194 EHFPD---PKSLATDLHLNGFKAIWMLDPG-IKHED-GYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVR 268 (475)
Q Consensus 194 ~~fPd---p~~~v~~L~~~g~k~v~~v~P~-i~~~~-~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~ 268 (475)
.+|.. .+.||+++|++|+++|+=+-|. ...+. +...|+. . .++ ...+...-....|. +...|+.+|+++
T Consensus 313 ~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~l~~fdg-~--~~Y-e~~d~~~g~~~~W~--~~~~N~~~peVr 386 (730)
T PRK12568 313 ARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDG-A--ALY-EHADPREGMHRDWN--TLIYNYGRPEVT 386 (730)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccccccCCC-c--ccc-ccCCCcCCccCCCC--CeecccCCHHHH
Confidence 45554 5799999999999999854443 32221 1111211 0 011 01110000112353 235799999999
Q ss_pred HHHHHHHHHhhh-CCccEEEecCC
Q 046216 269 SWWASLVRDFVY-NGVDGIWNDMN 291 (475)
Q Consensus 269 ~ww~~~~~~~~~-~G~dg~w~D~~ 291 (475)
++..+.++.+++ .|||||=+|.-
T Consensus 387 ~~li~~a~~Wl~eyhIDG~R~DAv 410 (730)
T PRK12568 387 AYLLGSALEWIEHYHLDGLRVDAV 410 (730)
T ss_pred HHHHHHHHHHHHHhCceEEEEcCH
Confidence 999999988885 79999999964
No 62
>PLN02361 alpha-amylase
Probab=88.79 E-value=2.3 Score=44.40 Aligned_cols=33 Identities=24% Similarity=0.058 Sum_probs=26.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-CCccEEEecCCC
Q 046216 260 PDYTQSKVRSWWASLVRDFVY-NGVDGIWNDMNK 292 (475)
Q Consensus 260 ~Dftnp~a~~ww~~~~~~~~~-~G~dg~w~D~~E 292 (475)
+|.+||++++...+-++-+.+ .|||||=+|...
T Consensus 149 Ld~~np~Vr~~l~~~~~wl~~~~GiDGfRlDavk 182 (401)
T PLN02361 149 IDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFAK 182 (401)
T ss_pred cCCCCHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 556889999988887776654 899999999653
No 63
>PLN02877 alpha-amylase/limit dextrinase
Probab=88.23 E-value=2.1 Score=49.22 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=54.6
Q ss_pred ChHHHHHHHHHCCCeEEEeeCC-ccccCCC---ccccccCCCCceeee-CCCCCCeeeeecCCccccCCCCCHHHHHHHH
Q 046216 198 DPKSLATDLHLNGFKAIWMLDP-GIKHEDG---YFVYDSGPKIDVWIR-KPDGTPFIGEVWPGPCAFPDYTQSKVRSWWA 272 (475)
Q Consensus 198 dp~~~v~~L~~~g~k~v~~v~P-~i~~~~~---y~~y~~g~~~~~~v~-~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~ 272 (475)
+.++||+.||++|+++|+=|-. +...... ...++. ..-+||.+ +.+|..-...| +.-..-.++.++++.-
T Consensus 467 efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~-~vP~YY~r~~~~G~~~ns~c----~n~~Ase~~mvrklIl 541 (970)
T PLN02877 467 EFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDK-IVPGYYLRRNSDGFIENSTC----VNNTASEHYMVDRLIV 541 (970)
T ss_pred HHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccC-CCCCceEEECCCCCcccCCc----cCCCccCCHHHHHHHH
Confidence 4789999999999999874322 2211100 011222 22255554 44554221111 1122446788999999
Q ss_pred HHHHHhh-hCCccEEEecCCC
Q 046216 273 SLVRDFV-YNGVDGIWNDMNK 292 (475)
Q Consensus 273 ~~~~~~~-~~G~dg~w~D~~E 292 (475)
+.++.++ +.|||||=+|...
T Consensus 542 Dsl~yW~~ey~VDGFRFDlmg 562 (970)
T PLN02877 542 DDLLNWAVNYKVDGFRFDLMG 562 (970)
T ss_pred HHHHHHHHHhCCCEEEEEccc
Confidence 9998877 5999999999764
No 64
>PLN02784 alpha-amylase
Probab=87.10 E-value=2.7 Score=47.55 Aligned_cols=33 Identities=24% Similarity=0.035 Sum_probs=26.2
Q ss_pred cCCCCCHHHHHHHHHHHHHhh-hCCccEEEecCC
Q 046216 259 FPDYTQSKVRSWWASLVRDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 259 ~~Dftnp~a~~ww~~~~~~~~-~~G~dg~w~D~~ 291 (475)
-+|..||++++...+-++-+. +.|||||=+|+.
T Consensus 642 DLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaV 675 (894)
T PLN02784 642 NIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFV 675 (894)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 356788999987777676665 589999999986
No 65
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=86.65 E-value=1.5 Score=48.20 Aligned_cols=93 Identities=19% Similarity=0.219 Sum_probs=63.6
Q ss_pred CCCCChHHHHHHHHHCCCeEEE-eeCCccccCC--CccccccCCC-CceeeeCCCCCCeeeeecCCccccCCCCCHHHHH
Q 046216 194 EHFPDPKSLATDLHLNGFKAIW-MLDPGIKHED--GYFVYDSGPK-IDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRS 269 (475)
Q Consensus 194 ~~fPdp~~~v~~L~~~g~k~v~-~v~P~i~~~~--~y~~y~~g~~-~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ 269 (475)
.|-.+.++||+++|..|+-|++ +|.-+.+.++ ++..|+ |.. ..||-+++. +.-|-+.+...+..+|++.+
T Consensus 308 ~ri~efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~fd-Gid~~~Yf~~~~r-----~~h~~~~~r~fn~~~~~V~r 381 (757)
T KOG0470|consen 308 CRINEFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMFD-GIDNSVYFHSGPR-----GYHNSWCSRLFNYNHPVVLR 381 (757)
T ss_pred cchHHHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhcc-CcCCceEEEeCCc-----ccccccccccccCCCHHHHH
Confidence 3444679999999999998776 4444444422 233343 555 445555442 33344456678899999999
Q ss_pred HHHHHHHHhh-hCCccEEEecCCC
Q 046216 270 WWASLVRDFV-YNGVDGIWNDMNK 292 (475)
Q Consensus 270 ww~~~~~~~~-~~G~dg~w~D~~E 292 (475)
..-+.++.++ ++.||||=+|..-
T Consensus 382 flL~nLr~WVtEY~vDGFRFD~~s 405 (757)
T KOG0470|consen 382 FLLSNLRWWVTEYHVDGFRFDLVS 405 (757)
T ss_pred HHHHHHHHHHHheeccceEEcchh
Confidence 9888888876 5899999999753
No 66
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=84.18 E-value=2.6 Score=45.78 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=50.7
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCcee-eeCCCCCC----eeeeecCCccccCCCCCHHHHHHHHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVW-IRKPDGTP----FIGEVWPGPCAFPDYTQSKVRSWWAS 273 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~-v~~~~G~~----~~~~~w~g~~~~~Dftnp~a~~ww~~ 273 (475)
.++.|+.+|+.|++.+...--+ ...++|. ..|+..... .++..+.. ..+..|+..-.+.|-.||+=++++.+
T Consensus 172 Vk~yI~~ah~~Gmkam~Ynmiy-aa~~~~~--~~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~ 248 (559)
T PF13199_consen 172 VKDYINAAHKYGMKAMAYNMIY-AANNNYE--EDGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIIN 248 (559)
T ss_dssp HHHHHHHHHHTT-EEEEEEESS-EEETT----S--SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHH
T ss_pred HHHHHHHHHHcCcceehhHhhh-ccccCcc--cccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHH
Confidence 4799999999999998874222 2222221 223332222 23443321 12345766678899999999999999
Q ss_pred HHHHhhh-CCccEEEecC
Q 046216 274 LVRDFVY-NGVDGIWNDM 290 (475)
Q Consensus 274 ~~~~~~~-~G~dg~w~D~ 290 (475)
++++.++ .|+|||=+|.
T Consensus 249 q~~~~~~~~gFDG~hlDq 266 (559)
T PF13199_consen 249 QMNKAIQNFGFDGWHLDQ 266 (559)
T ss_dssp HHHHHHHHHT--EEEEE-
T ss_pred HHHHHHHccCCceEeeec
Confidence 9988765 8999999996
No 67
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=83.29 E-value=3.9 Score=40.08 Aligned_cols=92 Identities=23% Similarity=0.346 Sum_probs=57.8
Q ss_pred CCCCCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeee-CCC--CCCeeeeecCCccccCCCCCHHHHH
Q 046216 193 FEHFPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIR-KPD--GTPFIGEVWPGPCAFPDYTQSKVRS 269 (475)
Q Consensus 193 ~~~fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~-~~~--G~~~~~~~w~g~~~~~Dftnp~a~~ 269 (475)
+..=|-.++=++.+++.|.++|..+.-+... .|..| -++ ++.+ .++ |. .-.-|||+ ..+-|-.|+=++
T Consensus 56 ~~~~~~~~eelr~~~~gg~~pIAYlsIg~ae--~yR~Y---wd~-~w~~~~p~wLg~--edP~W~Gn-y~VkYW~~eWkd 126 (300)
T COG2342 56 PFNTPWTIEELRTKADGGVKPIAYLSIGEAE--SYRFY---WDK-YWLTGRPDWLGE--EDPEWPGN-YAVKYWEPEWKD 126 (300)
T ss_pred CCCCcCcHHHHHHHhcCCeeEEEEEechhhh--hhhhH---hhh-hhhcCCcccccC--CCCCCCCC-ceeeccCHHHHH
Confidence 3333456677777888888888777543332 23332 111 1111 111 11 01249996 456788888888
Q ss_pred HHHHHHHHhhhCCccEEEecCCCC
Q 046216 270 WWASLVRDFVYNGVDGIWNDMNKP 293 (475)
Q Consensus 270 ww~~~~~~~~~~G~dg~w~D~~E~ 293 (475)
-+.+.++++.+.|+||+-+|--++
T Consensus 127 ii~~~l~rL~d~GfdGvyLD~VD~ 150 (300)
T COG2342 127 IIRSYLDRLIDQGFDGVYLDVVDA 150 (300)
T ss_pred HHHHHHHHHHHccCceEEEeeech
Confidence 888889999999999999998664
No 68
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15
Probab=82.85 E-value=2.7 Score=33.33 Aligned_cols=56 Identities=21% Similarity=0.509 Sum_probs=39.7
Q ss_pred CCCceeeeCCCCCCeeeeecCCcc---ccCCCCCHHHHHHHHHHHHHh-hhCCccEEEecCC
Q 046216 234 PKIDVWIRKPDGTPFIGEVWPGPC---AFPDYTQSKVRSWWASLVRDF-VYNGVDGIWNDMN 291 (475)
Q Consensus 234 ~~~~~~v~~~~G~~~~~~~w~g~~---~~~Dftnp~a~~ww~~~~~~~-~~~G~dg~w~D~~ 291 (475)
.....|.++.+|+.. ..|+|.. -..++..|..|.||.+.+.+. ...++||+.+|.+
T Consensus 17 ~~~~w~a~~~~g~~i--~~W~~~~~~~~~~~~~~~~~r~~w~~~v~e~~~~s~~DGv~~Dn~ 76 (79)
T PF14885_consen 17 PRADWFAKTANGSRI--SEWPGYPGHYQMYVWSCPDYRRYWVDAVVEELQNSPWDGVFADND 76 (79)
T ss_pred cCchhhccccCccce--eecCCCCceeeeccCCcchHHHHHHHHHHHHHhcCccceeeeecc
Confidence 345667777777653 4576643 235666699999999998764 4578999999964
No 69
>PRK09505 malS alpha-amylase; Reviewed
Probab=82.80 E-value=3.7 Score=45.90 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHhhh-CCccEEEecCCC
Q 046216 264 QSKVRSWWASLVRDFVY-NGVDGIWNDMNK 292 (475)
Q Consensus 264 np~a~~ww~~~~~~~~~-~G~dg~w~D~~E 292 (475)
||++++...+.++.+++ .|||||=+|...
T Consensus 435 n~~Vr~yL~~~ik~Wv~e~GIDGfRlDaak 464 (683)
T PRK09505 435 GYTPRDYLTHWLSQWVRDYGIDGFRVDTAK 464 (683)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEechH
Confidence 55888888888888885 799999999654
No 70
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=82.71 E-value=4.7 Score=43.89 Aligned_cols=34 Identities=32% Similarity=0.435 Sum_probs=29.2
Q ss_pred cCCCCCHHHHHHHHHHHHH-hhhCCccEEEecCCC
Q 046216 259 FPDYTQSKVRSWWASLVRD-FVYNGVDGIWNDMNK 292 (475)
Q Consensus 259 ~~Dftnp~a~~ww~~~~~~-~~~~G~dg~w~D~~E 292 (475)
-+|+.||+.++-+++.++. ..+.|+|||=+|...
T Consensus 182 Dln~~n~~V~~~~~~~l~~~~~~~gvdGfRiD~v~ 216 (545)
T KOG0471|consen 182 DLNYENPDVRKAIKEWLRDFWLEKGVDGFRIDAVK 216 (545)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhcCCCeEEEEccc
Confidence 3678999999999999995 558999999999874
No 71
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=81.89 E-value=16 Score=40.78 Aligned_cols=28 Identities=25% Similarity=0.437 Sum_probs=23.8
Q ss_pred CHH-HHHHHHHHHHHhhhCCccEEEecCC
Q 046216 264 QSK-VRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 264 np~-a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
+|+ +.++|.+.+..|.+.||||.|.|.-
T Consensus 368 ~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q 396 (758)
T PLN02355 368 NPEKVFSFYNELHSYLASAGIDGVKVDVQ 396 (758)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCeEEEchh
Confidence 555 5779999999998999999999964
No 72
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=76.13 E-value=10 Score=38.81 Aligned_cols=25 Identities=20% Similarity=0.142 Sum_probs=18.1
Q ss_pred CCCCCCChHHHHHHHHHCCCeEEEee
Q 046216 192 SFEHFPDPKSLATDLHLNGFKAIWML 217 (475)
Q Consensus 192 ~~~~fPdp~~~v~~L~~~g~k~v~~v 217 (475)
+++.| |+++.++..++.|.|+++++
T Consensus 87 ~p~~f-D~dqW~~~ak~aGakY~VlT 111 (346)
T PF01120_consen 87 NPTKF-DADQWAKLAKDAGAKYVVLT 111 (346)
T ss_dssp --TT---HHHHHHHHHHTT-SEEEEE
T ss_pred CcccC-CHHHHHHHHHHcCCCEEEee
Confidence 66666 89999999999999998875
No 73
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=72.42 E-value=16 Score=40.18 Aligned_cols=90 Identities=20% Similarity=0.326 Sum_probs=54.1
Q ss_pred CCCCCCh---HHHHHHHHHCCCeEEE-eeCCccccCCCcc-ccccCCCCceeeeCCCCCCeee--eecCCccccCCCC-C
Q 046216 193 FEHFPDP---KSLATDLHLNGFKAIW-MLDPGIKHEDGYF-VYDSGPKIDVWIRKPDGTPFIG--EVWPGPCAFPDYT-Q 264 (475)
Q Consensus 193 ~~~fPdp---~~~v~~L~~~g~k~v~-~v~P~i~~~~~y~-~y~~g~~~~~~v~~~~G~~~~~--~~w~g~~~~~Dft-n 264 (475)
..+|-.| +++|+.+|++|+-||+ ||--+...+..|. .|+ + -.+-+.++ +..| .-|. ..+++. .
T Consensus 207 ~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~~L~~fd-g---~~~~e~~~--~~~~~~~~Wg---~~i~~~gr 277 (628)
T COG0296 207 TSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDGNYLARFD-G---TFLYEHED--PRRGEHTDWG---TAIFNYGR 277 (628)
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcchhhhcC-C---ccccccCC--cccccCCCcc---cchhccCc
Confidence 4677655 7899999999999988 5544455543321 111 0 00111111 1111 2232 234444 8
Q ss_pred HHHHHHHHHHHHHhh-hCCccEEEecCC
Q 046216 265 SKVRSWWASLVRDFV-YNGVDGIWNDMN 291 (475)
Q Consensus 265 p~a~~ww~~~~~~~~-~~G~dg~w~D~~ 291 (475)
+++|.+.-+....++ +..|||+=+|.-
T Consensus 278 ~EVR~Fll~nal~Wl~~yHiDGlRvDAV 305 (628)
T COG0296 278 NEVRNFLLANALYWLEEYHIDGLRVDAV 305 (628)
T ss_pred HHHHHHHHHHHHHHHHHhCCcceeeehh
Confidence 999998777776665 589999999964
No 74
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=60.59 E-value=7.9 Score=40.23 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=21.0
Q ss_pred HHHHHH---HHHHHHhhh-CCccEEEecCCCC
Q 046216 266 KVRSWW---ASLVRDFVY-NGVDGIWNDMNKP 293 (475)
Q Consensus 266 ~a~~ww---~~~~~~~~~-~G~dg~w~D~~E~ 293 (475)
...++. ..++++|++ +|-|.+|+|++-+
T Consensus 173 ~~~~y~~~~~~Ql~ELit~Ygpd~lWfD~~~~ 204 (384)
T smart00812 173 RFQEFVDDWLPQLRELVTRYKPDLLWFDGGWE 204 (384)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 344554 889999885 6889999998643
No 75
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=47.85 E-value=16 Score=23.25 Aligned_cols=17 Identities=41% Similarity=0.589 Sum_probs=12.2
Q ss_pred HHHHhhhCCccEEEecC
Q 046216 274 LVRDFVYNGVDGIWNDM 290 (475)
Q Consensus 274 ~~~~~~~~G~dg~w~D~ 290 (475)
.++.+++.|+||+..|.
T Consensus 12 ~~~~~l~~GVDgI~Td~ 28 (30)
T PF13653_consen 12 SWRELLDLGVDGIMTDY 28 (30)
T ss_dssp HHHHHHHHT-SEEEES-
T ss_pred HHHHHHHcCCCEeeCCC
Confidence 34677889999999884
No 76
>PF10766 DUF2592: Protein of unknown function (DUF2592); InterPro: IPR019702 This entry represents proteins with unknown function, and appear to be restricted to Enterobacteriaceae. Some members are annotated as ybhY.
Probab=41.88 E-value=2.5 Score=28.41 Aligned_cols=18 Identities=33% Similarity=0.658 Sum_probs=13.7
Q ss_pred eeeccccccCCcccCCce
Q 046216 61 SLYGTGEVSGQLERTGKR 78 (475)
Q Consensus 61 ~~YGlGE~~~~l~~~G~~ 78 (475)
.+|||||.++-+.+-|++
T Consensus 22 lIyGlGevfN~iS~~Gh~ 39 (41)
T PF10766_consen 22 LIYGLGEVFNLISKIGHS 39 (41)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 489999998776666653
No 77
>PRK13840 sucrose phosphorylase; Provisional
Probab=40.97 E-value=31 Score=37.03 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCCccEEEecCC
Q 046216 260 PDYTQSKVRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 260 ~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
+++.||++++...+.++.+++.|||||=+|.-
T Consensus 164 LN~~NP~V~~~i~~il~fwl~~GVDgfRLDAv 195 (495)
T PRK13840 164 IDVHSAAGWEYLMSILDRFAASHVTLIRLDAA 195 (495)
T ss_pred eCCCCHHHHHHHHHHHHHHHHCCCCEEEEech
Confidence 56789999999999999999999999999974
No 78
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=37.83 E-value=74 Score=32.71 Aligned_cols=90 Identities=18% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCChHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHH
Q 046216 196 FPDPKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLV 275 (475)
Q Consensus 196 fPdp~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~ 275 (475)
|.....+++.++++|+|+++.+...-.+. + ++++ --+....+.+|.... .|.....++.+|..++.....+
T Consensus 46 F~~lD~~l~~a~~~Gi~viL~~~~~~~P~--W-l~~~--~Pe~~~~~~~g~~~~----~g~~~~~~~~~p~yr~~~~~~~ 116 (374)
T PF02449_consen 46 FSWLDRVLDLAAKHGIKVILGTPTAAPPA--W-LYDK--YPEILPVDADGRRRG----FGSRQHYCPNSPAYREYARRFI 116 (374)
T ss_dssp -HHHHHHHHHHHCTT-EEEEEECTTTS-H--H-HHCC--SGCCC-B-TTTSBEE----CCCSTT-HCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhccCeEEEEeccccccc--c-hhhh--cccccccCCCCCcCc----cCCccccchhHHHHHHHHHHHH
Confidence 44578999999999999998764221110 0 1111 112334455664321 2334456788999988877777
Q ss_pred HHhhh----C-CccEEEecCCCCCC
Q 046216 276 RDFVY----N-GVDGIWNDMNKPAA 295 (475)
Q Consensus 276 ~~~~~----~-G~dg~w~D~~E~~~ 295 (475)
+.+.+ . .|-||-+| ||+..
T Consensus 117 ~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 117 RALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp HHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred HHHHhhccccceEEEEEec-cccCc
Confidence 66542 2 36688787 78765
No 79
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=34.44 E-value=2e+02 Score=32.63 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=23.7
Q ss_pred CH-HHHHHHHHHHHHhhhCCccEEEecCC
Q 046216 264 QS-KVRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 264 np-~a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
+| ++.+.|.+.+..|.+.||||+|.|.-
T Consensus 362 ~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q 390 (747)
T PF05691_consen 362 DPEDAFRFYDDFHSYLASAGVDGVKVDVQ 390 (747)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEchh
Confidence 45 46779999999998999999999964
No 80
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=32.12 E-value=1.2e+02 Score=33.94 Aligned_cols=74 Identities=12% Similarity=-0.029 Sum_probs=46.7
Q ss_pred HHHCCCeEEEeeCCc-cccCCCccccccCCCCceeeeCCCCCC-eeeeecCCccccCCCCCHHHHHHHHHHHHHhhh-CC
Q 046216 206 LHLNGFKAIWMLDPG-IKHEDGYFVYDSGPKIDVWIRKPDGTP-FIGEVWPGPCAFPDYTQSKVRSWWASLVRDFVY-NG 282 (475)
Q Consensus 206 L~~~g~k~v~~v~P~-i~~~~~y~~y~~g~~~~~~v~~~~G~~-~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~-~G 282 (475)
-|..|+|+-.|+.|. +....+... ..+. +.++.+ -+..-|.+. +|-++|++|+|..+.+.++.. ..
T Consensus 390 ~~r~~v~v~AWmp~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~r---l~P~~pe~r~~i~~i~~dla~~~~ 458 (671)
T PRK14582 390 RTRAGVNVYAWMPVLSFDLDPTLPR---VKRL-----DTGEGKAQIHPEQYRR---LSPFDDRVRAQVGMLYEDLAGHAA 458 (671)
T ss_pred HHhhCCEEEEeccceeeccCCCcch---hhhc-----cccCCccccCCCCCcC---CCCCCHHHHHHHHHHHHHHHHhCC
Confidence 456799999999887 433222111 1111 111111 112223222 889999999999999999986 58
Q ss_pred ccEEEecC
Q 046216 283 VDGIWNDM 290 (475)
Q Consensus 283 ~dg~w~D~ 290 (475)
|||+-+|-
T Consensus 459 ~dGilf~D 466 (671)
T PRK14582 459 FDGILFHD 466 (671)
T ss_pred CceEEecc
Confidence 99998874
No 81
>TIGR03852 sucrose_gtfA sucrose phosphorylase. In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism.
Probab=30.24 E-value=64 Score=34.50 Aligned_cols=33 Identities=15% Similarity=0.093 Sum_probs=29.9
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhCCccEEEecCC
Q 046216 259 FPDYTQSKVRSWWASLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 259 ~~Dftnp~a~~ww~~~~~~~~~~G~dg~w~D~~ 291 (475)
-+||.||++++...+.++.+++.|||||=+|.-
T Consensus 159 DLN~~np~v~e~i~~il~fwl~~GvdgfRLDAv 191 (470)
T TIGR03852 159 DLDVTSETTKRFIRDNLENLAEHGASIIRLDAF 191 (470)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 467899999999999999999999999999986
No 82
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=30.06 E-value=2.5e+02 Score=31.83 Aligned_cols=49 Identities=20% Similarity=0.432 Sum_probs=33.8
Q ss_pred CcceeeCCCCC-CChhHHHHHHHH----HHHHhhcCCCccccCCCCCCCCCCHHHHH
Q 046216 362 RYAATWTGDNV-SNWEHLHMSISM----VLQLGLSGQPHSGPDIGGFAGNATPRLFG 413 (475)
Q Consensus 362 ry~~~W~GD~~-s~W~~L~~~I~~----~L~~~lsG~p~~g~DIgGf~g~~~~EL~~ 413 (475)
.|-+.|+|-.. .+||-+++.=+. +.+-++||=|..-+|--| ..+.||+.
T Consensus 495 AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG---~Hdf~LLk 548 (777)
T PLN02711 495 AYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVG---KHNFPLLK 548 (777)
T ss_pred hhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCC---CccHHHHH
Confidence 35567888775 899977665442 233489999999999764 44566654
No 83
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=29.96 E-value=1.6e+02 Score=28.18 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=37.3
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCeeeeecCCccccCCCCCHHHHHHHHHHHHHh
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPFIGEVWPGPCAFPDYTQSKVRSWWASLVRDF 278 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~ 278 (475)
.++.++.||++|+|+++.|.-.-. +..+ --..+++.++=+.+.+..+
T Consensus 53 ~~~~i~~l~~kG~KVl~sigg~~~----------------------~~~~-----------~~~~~~~~~~~fa~~l~~~ 99 (255)
T cd06542 53 KETYIRPLQAKGTKVLLSILGNHL----------------------GAGF-----------ANNLSDAAAKAYAKAIVDT 99 (255)
T ss_pred HHHHHHHHhhCCCEEEEEECCCCC----------------------CCCc-----------cccCCHHHHHHHHHHHHHH
Confidence 468899999999999987642100 0000 0012455565555555555
Q ss_pred h-hCCccEEEecC
Q 046216 279 V-YNGVDGIWNDM 290 (475)
Q Consensus 279 ~-~~G~dg~w~D~ 290 (475)
+ +.|+||+=+|.
T Consensus 100 v~~yglDGiDiD~ 112 (255)
T cd06542 100 VDKYGLDGVDFDD 112 (255)
T ss_pred HHHhCCCceEEee
Confidence 4 68999999997
No 84
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=29.44 E-value=1.7e+02 Score=32.64 Aligned_cols=32 Identities=13% Similarity=0.185 Sum_probs=26.4
Q ss_pred CCCCCHH--HHHHHH-HHHHHhhhCCccEEEecCC
Q 046216 260 PDYTQSK--VRSWWA-SLVRDFVYNGVDGIWNDMN 291 (475)
Q Consensus 260 ~Dftnp~--a~~ww~-~~~~~~~~~G~dg~w~D~~ 291 (475)
++|.||. +++-.. +.++.+.+.|++||=+|-+
T Consensus 262 LNw~dPs~av~~~~~gdal~~w~~lG~~GfRLDAv 296 (688)
T TIGR02455 262 LNWLDPTFAAQQLIIGDALHAIDCLGARGLRLDAN 296 (688)
T ss_pred cCccCccHHHHHHHHHHHHHHHHHhccccceeccc
Confidence 5688999 877666 6777888999999999974
No 85
>PF05748 Rubella_E1: Rubella membrane glycoprotein E1; InterPro: IPR008820 Rubella virus (RV), the sole member of the genus Rubivirus within the family Togaviridae, is a small enveloped, positive strand RNA virus. The nucleocapsid consists of 40S genomic RNA and a single species of capsid protein which is enveloped within a host-derived lipid bilayer containing two viral glycoproteins, E1 (58 kDa) and E2 (42-46 kDa). In virus infected cells, RV matures by budding either at the plasma membrane, or at the internal membranes depending on the cell type and enters adjacent uninfected cells by a membrane fusion process in the endosome, directed by E1-E2 heterodimers. The heterodimer formation is crucial for E1 transport out of the endoplasmic reticulum to the Golgi and plasma membrane. In RV E1, a cysteine at position 82 is crucial for the E1-E2 heterodimer formation and cell surface expression of the two proteins. E1 has been shown to be a type 1 membrane protein, rich in cysteine residues with extensive intramolecular disulphide bonds []. This family is found together with IPR008819 from INTERPRO and IPR008821 from INTERPRO.; GO: 0016021 integral to membrane, 0019013 viral nucleocapsid
Probab=23.11 E-value=60 Score=31.59 Aligned_cols=26 Identities=12% Similarity=0.033 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHhhccccccccCCCc
Q 046216 153 TSPTAVLVSLSHAVDNFLCHSSLFHD 178 (475)
Q Consensus 153 ~tp~~vi~~y~~l~G~~~~rw~Y~~~ 178 (475)
++|-+++.-....+|.+|+||+..+-
T Consensus 213 pdpgdlveyimnytgnqqsrwglgsp 238 (496)
T PF05748_consen 213 PDPGDLVEYIMNYTGNQQSRWGLGSP 238 (496)
T ss_pred CCchHHHHHHHhccCcccccccCCCC
Confidence 58999999889999999999998764
No 86
>PLN02635 disproportionating enzyme
Probab=23.01 E-value=98 Score=33.70 Aligned_cols=77 Identities=17% Similarity=0.287 Sum_probs=41.2
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCCe------------eeeecCCccccCCCCCHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTPF------------IGEVWPGPCAFPDYTQSK 266 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~~------------~~~~w~g~~~~~Dftnp~ 266 (475)
.+++.+..+++|++++-=+-=+|..++. ++. ...++|..+.+|.|. .|+.|.-+..-+|--..+
T Consensus 226 w~~l~~yA~~~Gi~L~gDlpi~Va~dSa-DvW---a~~~lF~ld~~g~p~~~aGaPPD~Fs~~GQ~WG~P~y~w~~l~~~ 301 (538)
T PLN02635 226 WQAVRSYANEKGISIIGDMPIYVGGHSA-DVW---ANRKLFLLNKTGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMAKD 301 (538)
T ss_pred HHHHHHHHHHCCCEEEEEeecccCCCcH-HHh---cCHHhhcCCCCCCcceeeeCCCCcCCcccccCCCcCcCHHHHHhc
Confidence 4667778889999865433223444331 222 234455555444332 355565543333322333
Q ss_pred HHHHHHHHHHHhh
Q 046216 267 VRSWWASLVRDFV 279 (475)
Q Consensus 267 a~~ww~~~~~~~~ 279 (475)
...||.++++..+
T Consensus 302 gy~ww~~Rlr~~~ 314 (538)
T PLN02635 302 GYSWWAGRMRRAL 314 (538)
T ss_pred CcHHHHHHHHHHH
Confidence 4569999998644
No 87
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=22.32 E-value=98 Score=23.97 Aligned_cols=24 Identities=25% Similarity=0.214 Sum_probs=17.2
Q ss_pred CChHHHHHHHHHCCCeEEEeeCCc
Q 046216 197 PDPKSLATDLHLNGFKAIWMLDPG 220 (475)
Q Consensus 197 Pdp~~~v~~L~~~g~k~v~~v~P~ 220 (475)
-.+++.|+.||++|.+++-.++-+
T Consensus 36 ~~~~~~I~~L~~~G~~vicY~s~G 59 (74)
T PF03537_consen 36 DFSKEEIARLKAQGKKVICYFSIG 59 (74)
T ss_dssp S--HHHHHHHHHTT-EEEEEEESS
T ss_pred cCCHHHHHHHHHCCCEEEEEEeCc
Confidence 367899999999998888776543
No 88
>PRK14508 4-alpha-glucanotransferase; Provisional
Probab=21.66 E-value=1.2e+02 Score=32.86 Aligned_cols=77 Identities=21% Similarity=0.308 Sum_probs=40.4
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCCCCC------------eeeeecCCccccCCCCCHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPDGTP------------FIGEVWPGPCAFPDYTQSK 266 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~G~~------------~~~~~w~g~~~~~Dftnp~ 266 (475)
.+++.+..+++|++++.=+--+|..++. ++. ...++|..+.+|.| -.|..|.-+..-++--..+
T Consensus 200 ~~~~~~yA~~~Gi~L~gDLpigV~~dsa-DvW---a~~~lF~l~~~~~p~~vaGaPPD~Fs~~GQ~WG~P~y~w~~l~~~ 275 (497)
T PRK14508 200 WKALKAYANDKGIEIIGDLPIYVAYDSA-DVW---ANPELFKLDEDGKPTVVAGVPPDYFSETGQLWGNPVYNWDALRKD 275 (497)
T ss_pred HHHHHHHHHHCCCEEEEeeecccCCCCH-HHH---cChhhhcCCCCCCcceeeeCCCCCCCcccCcCCCCCcCHHHHHhc
Confidence 4566777888999865444334444431 222 23445555544332 1355665543222222223
Q ss_pred HHHHHHHHHHHhh
Q 046216 267 VRSWWASLVRDFV 279 (475)
Q Consensus 267 a~~ww~~~~~~~~ 279 (475)
..+||.++++...
T Consensus 276 gy~ww~~rlr~~~ 288 (497)
T PRK14508 276 GYRWWIERLRRSF 288 (497)
T ss_pred CcHHHHHHHHHHH
Confidence 3679999998643
No 89
>TIGR00217 malQ 4-alpha-glucanotransferase. This enzyme is known as amylomaltase and disproportionating enzyme.
Probab=20.96 E-value=78 Score=34.27 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=46.7
Q ss_pred hHHHHHHHHHCCCeEEEeeCCccccCCCccccccCCCCceeeeCCC-CCC------ee-----eeecCCccccCCCCCHH
Q 046216 199 PKSLATDLHLNGFKAIWMLDPGIKHEDGYFVYDSGPKIDVWIRKPD-GTP------FI-----GEVWPGPCAFPDYTQSK 266 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~v~P~i~~~~~y~~y~~g~~~~~~v~~~~-G~~------~~-----~~~w~g~~~~~Dftnp~ 266 (475)
.+++.+..+.+|++++.=+--+|..++. ++. ...++|..+.+ |.| -. |..|.....-++--..+
T Consensus 214 ~~~l~~yA~~~~I~L~gDlpi~v~~dsa-DvW---a~~~~F~l~~~~GaP~~agvpPd~Fs~~GQ~WG~P~y~w~~l~~~ 289 (513)
T TIGR00217 214 FQALKRYANDMGIGLYGDLPVFVAYDSA-DVW---ADPELFCLRASAGAPKPAGLGPDYFLEQGQNWGLPPYDWNVLKAR 289 (513)
T ss_pred HHHHHHHHhcCCcEEEEeCcceeCCCcH-HHH---hCHHHhCCCcccCCCCCCCCCCCcccccCCCCCCCCcCHHHHHhc
Confidence 3445555666777766544334444431 222 22334444433 444 22 67776654333322333
Q ss_pred HHHHHHHHHHHhhh----------CCc-cEEEecCCCC
Q 046216 267 VRSWWASLVRDFVY----------NGV-DGIWNDMNKP 293 (475)
Q Consensus 267 a~~ww~~~~~~~~~----------~G~-dg~w~D~~E~ 293 (475)
...||.++++..++ .|+ .-||+..+++
T Consensus 290 gy~ww~~rlr~~~~~~d~lRIDHf~Gf~r~w~IP~g~~ 327 (513)
T TIGR00217 290 GYEWWIKRLGANMQYADILRIDHFRGFVSLWWVPAGES 327 (513)
T ss_pred CcHHHHHHHHHHHHhCCeEEecchhhhceeeeecCCCC
Confidence 45699999986432 343 3466776663
No 90
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=20.17 E-value=1.4e+02 Score=29.99 Aligned_cols=18 Identities=17% Similarity=0.429 Sum_probs=16.7
Q ss_pred hHHHHHHHHHCCCeEEEe
Q 046216 199 PKSLATDLHLNGFKAIWM 216 (475)
Q Consensus 199 p~~~v~~L~~~g~k~v~~ 216 (475)
|.++++.+|+.|.++.+|
T Consensus 253 ~~~f~~~~~~~g~~V~~~ 270 (309)
T cd08613 253 PNRFLARMEAAGTRVILV 270 (309)
T ss_pred CHHHHHHHHHcCCeEEEE
Confidence 788999999999999887
Done!