BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046223
(408 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|148927338|gb|ABR19818.1| terminal ear1-like 2 protein [Populus tremula x Populus alba]
Length = 677
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 210/444 (47%), Positives = 260/444 (58%), Gaps = 97/444 (21%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTL----FRPP-----------------------QVYY 33
M E G +F GNLDPRAQEFRP F P QVYY
Sbjct: 1 MEENGSVQFPGNLDPRAQEFRPRRDNLHNFSPKFLPFGPPTPPLPPPPPPPSQLPHQVYY 60
Query: 34 PYGAASPPTLPPYPSNDVQVVPFGG-VGYAQYPTH-PQLGV-----PLPPPSTGPTRTLV 86
PY QV+PF VG+AQY H P V P PP+ PTRTLV
Sbjct: 61 PYTP--------------QVLPFSDFVGFAQYDHHIPPAYVRVEPSPPLPPTGAPTRTLV 106
Query: 87 LSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQL 146
LS VP +V+E++++R+LEVFGEVRGVQMER+ G VTVHFYDLRHAE A +EIREQHM
Sbjct: 107 LSSVPSEVNESLIKRELEVFGEVRGVQMERVGYGTVTVHFYDLRHAERALREIREQHMLH 166
Query: 147 QQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVA 206
Q + L+N + N+++ + N+A P PPPARG++A
Sbjct: 167 QAR---LRN-----FFIQNSESISFNIA--------------------PTPPPPARGVIA 198
Query: 207 GRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKH 266
G VWAQFI+P+CN VPDG NQGT+VVFNLD VS+ +LKEIFQAFG VKE+RETPLK+H
Sbjct: 199 GCVVWAQFIIPSCNEVPDGQNQGTLVVFNLDPNVSTRSLKEIFQAFGAVKEVRETPLKRH 258
Query: 267 QRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTI 326
QRF+EFYDVRDAAKAL+EMNG+EIYGK V IEFSRPGGH K+FF A + + + + +
Sbjct: 259 QRFVEFYDVRDAAKALREMNGKEIYGKQVDIEFSRPGGHGKRFFNARPRTTSKNSFTTPV 318
Query: 327 YQT----RNSDCP------PPPL------SADPPSYSPRSFASQAPHFRKKSPSNSFKGN 370
+ + R+S PPPL PP+ SPRSF S+ K PS G+
Sbjct: 319 FDSTTNLRHSKVAAFVSPQPPPLLHRFSSGCSPPNVSPRSFLSETQSSAGKKPS----GD 374
Query: 371 PNNVN-VTCSIEPSVASLSLANAI 393
P+ N + SIE S+ LS+ +
Sbjct: 375 PSEGNPIEASIEASLGCLSMGGDV 398
>gi|255547976|ref|XP_002515045.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223546096|gb|EEF47599.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 622
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/419 (50%), Positives = 252/419 (60%), Gaps = 88/419 (21%)
Query: 1 MGETGISRFQGNLDPRAQEFRPT---------TLFR------------------------ 27
M ETGI+RFQG+LDPRAQEFRP TL
Sbjct: 1 MAETGIARFQGSLDPRAQEFRPRNNSLHLNTPTLIHHHHQQQQQQQQQLHIFTPPPPPPP 60
Query: 28 ---PPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVGYAQY---PTHPQLGVP-----LPP 76
Q+YYPY A PP+L G+ QY P PQ + LPP
Sbjct: 61 PPPAQQLYYPY--APPPSL----------------GFPQYQLAPPQPQAYISTTVPSLPP 102
Query: 77 PSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAF 136
S PTRTLVLS VP +VSE+++RR+LEVFGEVRGVQMER+ +GIVTVHFYDLRHAE+A
Sbjct: 103 QSAAPTRTLVLSSVPTEVSESVIRRELEVFGEVRGVQMERISDGIVTVHFYDLRHAEIAL 162
Query: 137 KEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPV 196
EIRE+HMQ Q + L+N +++ D NN + A +
Sbjct: 163 VEIREKHMQQQSR---LRNLFAAL------DQNNFLAPPSLPPSPAAAAA---------- 203
Query: 197 LPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVK 256
ARG +AG VWAQF++P+CNAVPDG+N GTIVVFNLD VS+S+LKEIFQAFG VK
Sbjct: 204 ----ARGFIAGCAVWAQFVIPSCNAVPDGHNHGTIVVFNLDPNVSTSSLKEIFQAFGAVK 259
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
ELRETPLKK QRF+EFYD+RDAAKALKEMNG+EI+GK VVIEFSRPGG +KFF +S+S
Sbjct: 260 ELRETPLKKQQRFVEFYDIRDAAKALKEMNGKEIHGKQVVIEFSRPGGFGRKFFNGSSTS 319
Query: 317 CASSLNYSTIYQ---TRNSDCPPPPLSADPPSYSPRSFASQAPHFRKKSPSNSFKGNPN 372
ASS + + +R + PPPP P+ SPR F +Q K SNS KGNPN
Sbjct: 320 KASSFHNAININPKISRYAPPPPPPPPPVRPNISPRPFLAQTHSSSVKRSSNSIKGNPN 378
>gi|225424576|ref|XP_002282117.1| PREDICTED: protein terminal ear1-like [Vitis vinifera]
Length = 658
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/418 (47%), Positives = 244/418 (58%), Gaps = 59/418 (14%)
Query: 1 MGETGISRFQGNLDPRAQEFRP--------TTLFRPPQVYYPYGAASPPTLPPYPSNDVQ 52
MGETG SRF GNLDP AQEFRP +L P Q+YYPY P + ++
Sbjct: 1 MGETGTSRFLGNLDPSAQEFRPRNPYIQNQMSLSVPTQIYYPYTHPHPQ----FVASSAY 56
Query: 53 VVPFGGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGV 112
V P G P L + P S PTR L+LS VP DVSE VRR+LE FGEVR V
Sbjct: 57 VRPIAG--------KPPLSPLMSPLSATPTRALLLSSVPTDVSEVTVRRELEAFGEVRSV 108
Query: 113 QMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNN 172
Q+ER+ +GIV V FYDLRHA+ E+REQHMQ Q + LK Y S
Sbjct: 109 QIERVCDGIVAVSFYDLRHAQACLTEVREQHMQQQSR---LKKHYDS------------- 152
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T +QV E L++ LPPPARGL+AGR VWAQF++P + D NQGT+V
Sbjct: 153 LLTRKLASQV--EHLLV------PLPPPARGLIAGRAVWAQFMIPVSTCMLDDYNQGTLV 204
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FNLDS VS+S+L++IF+ FG +KELRETPLK+HQRF+EF+D+RDAA+AL+EMNG++I G
Sbjct: 205 IFNLDSEVSTSSLRDIFETFGSIKELRETPLKRHQRFVEFFDIRDAARALREMNGKKIQG 264
Query: 293 KHVVIEFSRPGGHSKKFFYANSSSCASSLNYST----------IYQTRNSDCPPPPLSAD 342
K VVIEFSRPGGH +FF A S++ SS +T Y T S CPP
Sbjct: 265 KRVVIEFSRPGGHGWRFFNAISTTALSSTYSTTNSTVISPSRLAYHTVTSRCPPALPCKL 324
Query: 343 PPSYS-----PRSFASQAPHFRKKSPSNSFKGNPNNVNVTCSIEPSVASLSLANAIED 395
P S P S+ SQ H KKS K + N N+ S+ + S+ N IED
Sbjct: 325 PEKSSHFNVPPHSYLSQTHHSTKKSNVGINKRSSNAGNIKASMTSLRLTGSVVNGIED 382
>gi|224100115|ref|XP_002311749.1| predicted protein [Populus trichocarpa]
gi|222851569|gb|EEE89116.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 204/411 (49%), Positives = 246/411 (59%), Gaps = 74/411 (18%)
Query: 1 MGETGISRFQGNLDPRAQEFRP--TTLFRPPQVYYPYGAASPPT------LPP--YPSND 50
M E G +F GNLDPRAQEFRP L + P+G PP LP Y +
Sbjct: 1 MEENGSVQFPGNLDPRAQEFRPRRDNLHNFSPKFLPFGPPPPPPPPPPPQLPHQVYYTYT 60
Query: 51 VQVVPFGG-VGYAQYPTH-PQLGV---PLPP--PSTGPTRTLVLSYVPGDVSETIVRRDL 103
Q +PF VG+ QY H P V PLPP P+ PTRTLVLS VP +V+E+++RR+L
Sbjct: 61 PQALPFSDFVGFVQYDHHIPPAYVSVEPLPPLPPTGAPTRTLVLSSVPSEVNESLIRREL 120
Query: 104 EVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLML 163
EVFGEVRGVQMER+ G VTVHFYDLRHAE A +EIREQHM Q + L+N +
Sbjct: 121 EVFGEVRGVQMERVGYGTVTVHFYDLRHAERALREIREQHMLHQAR---LRN-----FFI 172
Query: 164 MNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVP 223
N+++ + N+A P PPPARG++AG VWAQFI+P+CN VP
Sbjct: 173 QNSESISFNIA--------------------PTPPPPARGVIAGCVVWAQFIIPSCNEVP 212
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
DG NQGT+VVFNLD VS+ +LKEIFQAFG VKE+RETPLK+HQRFIEFYDVRDAAKAL+
Sbjct: 213 DGQNQGTLVVFNLDPNVSTRSLKEIFQAFGAVKEVRETPLKRHQRFIEFYDVRDAAKALR 272
Query: 284 EMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSADP 343
EMNG+EIYGK V IEFSRPGGH KKFF A P +
Sbjct: 273 EMNGKEIYGKQVDIEFSRPGGHGKKFFNAR------------------------PRATSK 308
Query: 344 PSYSPRSFASQAPHFRKKSPSNSFKGNPNNVN-VTCSIEPSVASLSLANAI 393
S++ F S K PS G+P+ N + SIE S+ LSL +
Sbjct: 309 NSFTTPVFDSTTNLRHSKKPS----GDPSEGNPIEASIEASLGCLSLGGDV 355
>gi|224107727|ref|XP_002314579.1| predicted protein [Populus trichocarpa]
gi|222863619|gb|EEF00750.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/313 (58%), Positives = 208/313 (66%), Gaps = 35/313 (11%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTLFRPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVG 60
M ETG F GNLDPRAQEFRP R + P PP P
Sbjct: 1 MEETGFVPFPGNLDPRAQEFRP----RHNNLQDFTTKFPPFGPPPPPPPPQLPQLLHQYH 56
Query: 61 YAQYPTHPQLGVPLP-PPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLME 119
+ P + +G PLP PP+ PTRTLVLS VP DVSET++RR+LEVFGEVRGVQMER+ +
Sbjct: 57 HHVPPMYDTVGTPLPLPPTGAPTRTLVLSSVPSDVSETLIRRELEVFGEVRGVQMERVGD 116
Query: 120 GIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYD 179
GIVTVHFYDLRHAE A +EIREQHM Q + L+N L + N
Sbjct: 117 GIVTVHFYDLRHAERALREIREQHMLHQAR---LRN-----LFIQN-------------- 154
Query: 180 NQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSG 239
ESL + + AP PPPARGL+AG VWAQFI+P+C AVPDG NQGT+VVFNLD
Sbjct: 155 ----CESLSL--NIAP--PPPARGLIAGCVVWAQFIIPSCKAVPDGQNQGTLVVFNLDPN 206
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
VS+ LKE FQAFG VKELRETPLK+HQRF+EFYDVRDAAKAL EMNG+EIYGK V IEF
Sbjct: 207 VSTRCLKETFQAFGAVKELRETPLKRHQRFVEFYDVRDAAKALGEMNGKEIYGKQVDIEF 266
Query: 300 SRPGGHSKKFFYA 312
SRPGG+ KKFF A
Sbjct: 267 SRPGGYGKKFFNA 279
>gi|449500381|ref|XP_004161082.1| PREDICTED: protein terminal ear1-like [Cucumis sativus]
Length = 644
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 217/332 (65%), Gaps = 59/332 (17%)
Query: 1 MGETGISRFQGNLDPRAQEFRPT------TLFRPP--QVYYPYGAASPPTLPPYPSNDVQ 52
MGETG+ R Q +LDP AQEFRP LF PP VYY +G PP+ +N++Q
Sbjct: 1 MGETGVIRHQKSLDPAAQEFRPGYVTNLPALFGPPVRHVYYSFGTPFPPS-----TNELQ 55
Query: 53 VVPFGGVGYAQYPTHP------------QLGVP-LPPPSTGPTRTLVLSYVPGDVSETIV 99
V PF + P P + VP + P S+ PTR+L+LS VP DVSE++V
Sbjct: 56 VEPFCNSVLTRSPNFPIDFNTAFVNPVEDIAVPEVQPLSSSPTRSLLLSAVPSDVSESVV 115
Query: 100 RRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSS 159
RRDLE FG+VRGVQMER+ GI+TVH+YDLRHAE AF+++R Q++ ++Q ++N +S
Sbjct: 116 RRDLECFGDVRGVQMERIRNGILTVHYYDLRHAEKAFRKMRSQNLMRRKQ---VRNQHSR 172
Query: 160 GLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTC 219
L NN T P AR L+ G VWA+F++PT
Sbjct: 173 FL--------QNNFDTP---------------------PRLARALIGGCDVWAEFVIPTS 203
Query: 220 NA-VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDA 278
NA VPDGNNQGTIVVFNLD GVS+STLKEIF+ FGPVK++RETPLKKHQRF+EF+DVRDA
Sbjct: 204 NAAVPDGNNQGTIVVFNLDLGVSASTLKEIFERFGPVKDVRETPLKKHQRFVEFFDVRDA 263
Query: 279 AKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
A A+KEMNG+EI+GK VV+EFSRPGG +KFF
Sbjct: 264 AMAVKEMNGKEIHGKPVVVEFSRPGGSGRKFF 295
>gi|449517014|ref|XP_004165541.1| PREDICTED: LOW QUALITY PROTEIN: protein terminal ear1-like [Cucumis
sativus]
Length = 750
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 221/349 (63%), Gaps = 61/349 (17%)
Query: 1 MGETGISRFQ---GNLDPRAQEFRP---TTLFRPP---QVYYPYGAASPPTLPPYPSNDV 51
M ETG Q G+LDP AQEFRP TTLF P +V++PY PP +DV
Sbjct: 1 MAETGGVYGQFLAGSLDPTAQEFRPRYSTTLFLPQPPHRVFFPY----PPI------SDV 50
Query: 52 QVVPF--GGVGYAQYPTHPQLGVPLPPP-STGPTRTLVLSYVPGDVSETIVRRDLEVFGE 108
++PF GV Y + T VP+ P S+ TR+LV+S VP DVSET+VRR+LEVFGE
Sbjct: 51 PLLPFCETGVTYPPFTTTESAYVPVRSPVSSVATRSLVVSSVPCDVSETMVRRELEVFGE 110
Query: 109 VRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDN 168
+RGVQMER+ EGIV +HFYD+RHAE A +EIR+QHM Q + L+N +++
Sbjct: 111 IRGVQMERVKEGIVIIHFYDIRHAERALREIRDQHMHHQCR---LRNYFNN--------- 158
Query: 169 NNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQ 228
++ NS P P PA GL+AG VWAQFIVP G NQ
Sbjct: 159 ------------NNNNNGFLLSNSSLP-RPSPAPGLIAGHAVWAQFIVPA------GKNQ 199
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
GTIV+FNLDS VS+S L+EIF+ FG VKELRETPLKK QRF+EF+D+RDA KALKEMNG+
Sbjct: 200 GTIVIFNLDSTVSTSCLREIFERFGQVKELRETPLKKQQRFVEFFDIRDAGKALKEMNGK 259
Query: 289 EIYGKHVVIEFSRPGGHSKKFFYANSSS---CASSLNYSTIYQTRNSDC 334
EI GK V+IEFSRPGGH KFF AN ++ C S+ YS R+S C
Sbjct: 260 EINGKSVLIEFSRPGGHGNKFFNANLTTPAICGSNNIYS-----RSSKC 303
>gi|449435442|ref|XP_004135504.1| PREDICTED: protein terminal ear1-like [Cucumis sativus]
Length = 659
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 218/349 (62%), Gaps = 61/349 (17%)
Query: 1 MGETGISRFQ---GNLDPRAQEFRP---TTLFRPP---QVYYPYGAASPPTLPPYPSNDV 51
M ETG Q G+LDP AQEFRP TTLF P +V++PY PP +DV
Sbjct: 1 MAETGGVYGQFLAGSLDPTAQEFRPRYSTTLFLPQPPHRVFFPY----PPI------SDV 50
Query: 52 QVVPF--GGVGYAQYPTHPQLGVPLPPP-STGPTRTLVLSYVPGDVSETIVRRDLEVFGE 108
++PF GV Y + T VP+ P S+ TR+LV+S VP DVSET+VRR+LEVFGE
Sbjct: 51 PLLPFCETGVTYPPFTTTESAYVPVRSPVSSVATRSLVVSSVPCDVSETMVRRELEVFGE 110
Query: 109 VRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDN 168
+RGVQMER+ EGIV +HFYD+RHAE A +EIR+QHM Q + N ++
Sbjct: 111 IRGVQMERVKEGIVIIHFYDIRHAERALREIRDQHMHHQCRLRNYLNNNNN--------- 161
Query: 169 NNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQ 228
++ NS P P PA GL+AG VWAQFIVP G NQ
Sbjct: 162 ---------------NNGFLLSNSSLP-RPSPAPGLIAGHAVWAQFIVPA------GKNQ 199
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
GTIV+FNLDS VS+S L+EIF+ FG VKELRETPLKK QRF+EF+D+RDA KALKEMNG+
Sbjct: 200 GTIVIFNLDSTVSTSCLREIFERFGQVKELRETPLKKQQRFVEFFDIRDAGKALKEMNGK 259
Query: 289 EIYGKHVVIEFSRPGGHSKKFFYANSSS---CASSLNYSTIYQTRNSDC 334
EI GK V+IEFSRPGGH KFF AN ++ C S+ YS R+S C
Sbjct: 260 EINGKSVLIEFSRPGGHGNKFFNANLTTPAICGSNNIYS-----RSSKC 303
>gi|449450610|ref|XP_004143055.1| PREDICTED: protein terminal ear1-like [Cucumis sativus]
Length = 637
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 205/332 (61%), Gaps = 66/332 (19%)
Query: 1 MGETGISRFQGNLDPRAQEFRPT------TLFRPP--QVYYPYGAASPPTLPPYPSNDVQ 52
MGETG+ R Q +LDP AQEFRP LF PP VYY +G PP+ +N++Q
Sbjct: 1 MGETGVIRLQKSLDPAAQEFRPGYVTNLPALFGPPVRHVYYSFGTPFPPS-----TNELQ 55
Query: 53 VVPFGGVGYAQYPTHP------------QLGVP-LPPPSTGPTRTLVLSYVPGDVSETIV 99
V PF + P P + VP + P S+ PTR+L+LS VP DVSE++V
Sbjct: 56 VEPFCNSVLTRSPNFPIDFNTAFVNPVEDIAVPEVQPLSSSPTRSLLLSAVPSDVSESVV 115
Query: 100 RRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSS 159
RRDLE FG+VRGVQMER+ GI+TVH+YDLRHAE AF+++R Q++ ++Q +N +S
Sbjct: 116 RRDLECFGDVRGVQMERIRNGILTVHYYDLRHAEKAFRKMRSQNLMRRKQ---FRNQHSR 172
Query: 160 GLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTC 219
L NN T P AR L+ G VWA+F++PT
Sbjct: 173 FL--------QNNFDTP---------------------PRLARALIGGCDVWAEFVIPTS 203
Query: 220 N-AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDA 278
N AVPDGNNQGTIVVFNLD GV +STLKEIF+ FG L +HQRF+EF+DVRDA
Sbjct: 204 NAAVPDGNNQGTIVVFNLDLGVCASTLKEIFERFGNF-------LSRHQRFVEFFDVRDA 256
Query: 279 AKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
A A+KEMNG+EI+GK VV+EFSRPGG +KFF
Sbjct: 257 AMAVKEMNGKEIHGKPVVVEFSRPGGSGRKFF 288
>gi|297814854|ref|XP_002875310.1| hypothetical protein ARALYDRAFT_322753 [Arabidopsis lyrata subsp.
lyrata]
gi|297321148|gb|EFH51569.1| hypothetical protein ARALYDRAFT_322753 [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 187/336 (55%), Gaps = 76/336 (22%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTLFRPPQVYYPYGAASPP----------------TLP 44
M ++ + F GNLDPRAQEF P Y+P+ SP +P
Sbjct: 1 MEDSRLFPFAGNLDPRAQEFIPLNP-TSSGFYFPFTPPSPLPPPLHPSSEPRVFTFFNIP 59
Query: 45 PYP-----------SNDVQVVPFGGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGD 93
P+P + F GV AQ LPPPS PTR+L L VP D
Sbjct: 60 PHPVMFSPPPSQPPPSPPPRPCFNGVSAAQR---------LPPPSNSPTRSLSLISVPRD 110
Query: 94 VSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGL 153
V+E+ VRRDLEV+G+VRGVQMER+ EGIVTVHFYD+R A+ A +E+ +HMQ QQ+ G
Sbjct: 111 VTESTVRRDLEVYGDVRGVQMERISEGIVTVHFYDIRDAKRAVREVCGRHMQ--QQARGG 168
Query: 154 KNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQ 213
S ARG V+GRPVWAQ
Sbjct: 169 SVWSSPSTSS-------------------------------------ARGFVSGRPVWAQ 191
Query: 214 FIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFY 273
F+VP +AVP G NQGT+V+FNLD VSS TL++ FQ +GP+KELRETP KKHQRFIEFY
Sbjct: 192 FVVPATSAVPGGCNQGTLVIFNLDPEVSSITLRQFFQVYGPIKELRETPYKKHQRFIEFY 251
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DVRDAA+A MNG+EI GK VVIEFSRPGG KF
Sbjct: 252 DVRDAARAFDRMNGEEIGGKQVVIEFSRPGGIKNKF 287
>gi|11994255|dbj|BAB01438.1| unnamed protein product [Arabidopsis thaliana]
Length = 708
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 190/344 (55%), Gaps = 86/344 (25%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTLFRPPQ--VYYPYGAASPPTLPPYPSNDVQVVP--- 55
M ++ + F GNLDPRAQEF P F P ++PY P PP P + + P
Sbjct: 94 MEDSRLFPFVGNLDPRAQEFIP---FNPISSGFHFPYTPPPPQLPPPLPPSSYGLSPTEP 150
Query: 56 ------------------------------FGGVGYAQYPTHPQLGVPLPPPSTGPTRTL 85
F GV AQ LP PS PTR+L
Sbjct: 151 RVFTFFNIPPHPMMFSPPPPQPPPPPPRPCFNGVSAAQR---------LPLPSNTPTRSL 201
Query: 86 VLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQ 145
L VP DV+E+ VRRDLEV+G+VRGVQMER+ EGIVTVHFYD+R A+ A +E+ +HMQ
Sbjct: 202 SLISVPRDVTESTVRRDLEVYGDVRGVQMERISEGIVTVHFYDIRDAKRAVREVCGRHMQ 261
Query: 146 LQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLV 205
QQ+ G + ++ ARG V
Sbjct: 262 --QQARG-------------------------------------GSVWSSPSTSSARGFV 282
Query: 206 AGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKK 265
+GRPVWAQF+VP +AVP G NQGT+V+FNLD VSS TL++IFQ +GP+KELRETP KK
Sbjct: 283 SGRPVWAQFVVPATSAVPGGCNQGTLVIFNLDPEVSSITLRQIFQVYGPIKELRETPYKK 342
Query: 266 HQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
HQRF+EFYDVRDAA+A MNG+EI GK VVIEFSRPGG +F
Sbjct: 343 HQRFVEFYDVRDAARAFDRMNGKEIGGKQVVIEFSRPGGIKNRF 386
>gi|15231512|ref|NP_189242.1| terminal EAR1-like 1 [Arabidopsis thaliana]
gi|332643601|gb|AEE77122.1| terminal EAR1-like 1 [Arabidopsis thaliana]
Length = 615
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 188/344 (54%), Gaps = 86/344 (25%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTLFRPPQ--VYYPYGAASPPTLPPYPSNDVQVVP--- 55
M ++ + F GNLDPRAQEF P F P ++PY P PP P + + P
Sbjct: 1 MEDSRLFPFVGNLDPRAQEFIP---FNPISSGFHFPYTPPPPQLPPPLPPSSYGLSPTEP 57
Query: 56 ------------------------------FGGVGYAQYPTHPQLGVPLPPPSTGPTRTL 85
F GV AQ LP PS PTR+L
Sbjct: 58 RVFTFFNIPPHPMMFSPPPPQPPPPPPRPCFNGVSAAQR---------LPLPSNTPTRSL 108
Query: 86 VLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQ 145
L VP DV+E+ VRRDLEV+G+VRGVQMER+ EGIVTVHFYD+R A+ A +E+ +HMQ
Sbjct: 109 SLISVPRDVTESTVRRDLEVYGDVRGVQMERISEGIVTVHFYDIRDAKRAVREVCGRHMQ 168
Query: 146 LQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLV 205
QQ+ G S ARG V
Sbjct: 169 --QQARGGSVWSSPSTSS-------------------------------------ARGFV 189
Query: 206 AGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKK 265
+GRPVWAQF+VP +AVP G NQGT+V+FNLD VSS TL++IFQ +GP+KELRETP KK
Sbjct: 190 SGRPVWAQFVVPATSAVPGGCNQGTLVIFNLDPEVSSITLRQIFQVYGPIKELRETPYKK 249
Query: 266 HQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
HQRF+EFYDVRDAA+A MNG+EI GK VVIEFSRPGG +F
Sbjct: 250 HQRFVEFYDVRDAARAFDRMNGKEIGGKQVVIEFSRPGGIKNRF 293
>gi|225452248|ref|XP_002271386.1| PREDICTED: uncharacterized protein LOC100266431 [Vitis vinifera]
gi|147774132|emb|CAN67825.1| hypothetical protein VITISV_019417 [Vitis vinifera]
Length = 612
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 199/353 (56%), Gaps = 61/353 (17%)
Query: 1 MGETG-ISRFQGNLDPRAQEFRPT---------TLFRPPQVY-YPYGAASPPTLPPYPSN 49
M E G +++FQ NLDP+AQEFRP T F+P Y YP+ S P +
Sbjct: 1 MKEAGEVAKFQKNLDPQAQEFRPRNPSSNNQIGTPFQPHICYAYPFSYVSTPVM------ 54
Query: 50 DVQVVPFGGVGYAQYPTHPQL--GVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFG 107
+ P L G PLPP + GPTR ++LS VP DVSE VR ++E FG
Sbjct: 55 ----------------SQPSLAAGTPLPPAAPGPTRVVLLSCVPTDVSEAAVRMEMEGFG 98
Query: 108 EVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNND 167
EV V+MERL +GIV VHFYDLRHAE A EI+EQ+MQ Q + L+ Y ML +
Sbjct: 99 EVGAVEMERLRDGIVIVHFYDLRHAEEAVMEIQEQYMQQQSR---LRRFYEYDAMLFGHL 155
Query: 168 NNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNA-VPDGN 226
+ +SL++ ++ PARGL+AGR VWAQF P PDG+
Sbjct: 156 G-------------LERQSLVVPVAF------PARGLIAGRAVWAQFSAPESTTPTPDGH 196
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGT+V+ NLDS +S S LKEI Q FG VKE RE K+ + F+EF+D RDAA+A E++
Sbjct: 197 NQGTLVISNLDSKLSESKLKEIVQNFGHVKEFREMTPKQQKWFVEFFDTRDAARAFSELD 256
Query: 287 GQEIYGKHVVIEFSRPGGHSK---KFFYANSSSCASSLNYSTIYQTRNSDCPP 336
G+EIY K ++I+FS GG+ + A +++ + +N I +R + C P
Sbjct: 257 GKEIYDKKLIIKFSCSGGYGRIKSSTAAATATTSYNDINSRKIIHSRTALCSP 309
>gi|297838525|ref|XP_002887144.1| hypothetical protein ARALYDRAFT_475881 [Arabidopsis lyrata subsp.
lyrata]
gi|297332985|gb|EFH63403.1| hypothetical protein ARALYDRAFT_475881 [Arabidopsis lyrata subsp.
lyrata]
Length = 519
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 150/235 (63%), Gaps = 45/235 (19%)
Query: 78 STGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFK 137
S PTR ++L VP DV+ET +RRD+E+FGEVRGVQMER+ EGIVTVHFY+LR+++ A
Sbjct: 63 SITPTRAVMLLPVPADVTETSLRRDMELFGEVRGVQMERVDEGIVTVHFYNLRNSQRALN 122
Query: 138 EIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVL 197
EIR +HMQ Q+Q
Sbjct: 123 EIRYRHMQEQEQHLQFTT------------------------------------------ 140
Query: 198 PPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE 257
ARGLV+G +WA F+ P NAVP+GNNQG++V+ NL+ VSS+TL+ IFQ +G VK+
Sbjct: 141 ---ARGLVSGHSLWAHFVFPQLNAVPEGNNQGSLVIMNLEPTVSSTTLRHIFQVYGEVKQ 197
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYA 312
+RETP K+ QRF+EF+DVRDAAKAL+ MNG+ I GK +VI+FSRPGG +KK F A
Sbjct: 198 VRETPYKREQRFVEFFDVRDAAKALRVMNGKVISGKPMVIQFSRPGGLTKKLFLA 252
>gi|15220536|ref|NP_176943.1| terminal EAR1-like 2 protein [Arabidopsis thaliana]
gi|11072029|gb|AAG28908.1|AC008113_24 F12A21.10 [Arabidopsis thaliana]
gi|91806047|gb|ABE65752.1| RNA-binding protein [Arabidopsis thaliana]
gi|332196571|gb|AEE34692.1| terminal EAR1-like 2 protein [Arabidopsis thaliana]
Length = 527
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 150/236 (63%), Gaps = 43/236 (18%)
Query: 78 STGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFK 137
S PTR ++L VP V+ET +RRD+E+FGEVRGVQMER EGIV HFY+L +++ AF
Sbjct: 75 SVTPTRAVMLLQVPATVTETSLRRDMELFGEVRGVQMERAHEGIVIFHFYNLINSQRAFN 134
Query: 138 EIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVL 197
EIR +HMQ Q+Q + T
Sbjct: 135 EIRYRHMQQQEQQQHF------------------HFTT---------------------- 154
Query: 198 PPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE 257
ARGLV+G +WA F+ P NAVP+GNNQG++V+ NL+ VSSSTL+ IFQ +G VK+
Sbjct: 155 ---ARGLVSGHSLWAHFVFPQLNAVPEGNNQGSLVIMNLEPTVSSSTLRHIFQVYGEVKQ 211
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYAN 313
+RETP K+ QRF+EF+DVRDAAKAL+ MNG+ I GK +VI+FSRPGG +KK F+A+
Sbjct: 212 VRETPCKREQRFVEFFDVRDAAKALRVMNGKVISGKPMVIQFSRPGGLTKKLFFAS 267
>gi|356538125|ref|XP_003537555.1| PREDICTED: protein terminal ear1 homolog [Glycine max]
Length = 528
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 190/390 (48%), Gaps = 119/390 (30%)
Query: 2 GETGI-SRFQGNLDPRAQEFRPTTLFRPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVG 60
G TG S+ NLDPRA+EFRP T+ Q Y P P P ++
Sbjct: 19 GRTGYHSQLPRNLDPRAEEFRPYTINSQCQWYPLPPPLPLPLPIPLPPPNL--------- 69
Query: 61 YAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEG 120
+T TR+L+L+ VP S + +R +L+ FG++R +Q E L G
Sbjct: 70 -----------------TTSSTRSLLLTPVPL-TSHSALRAELQAFGDIRALQTEALRHG 111
Query: 121 IVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDN 180
I+TVHF+DLRHA+ AF IR +
Sbjct: 112 ILTVHFFDLRHAQSAFAAIRSMQLHFH--------------------------------- 138
Query: 181 QVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGV 240
P GL++ V +P N++PD +NQGT+V+FNL +
Sbjct: 139 -------------------PNPGLLSAHYV-----LPNSNSLPDSHNQGTLVIFNLHPNL 174
Query: 241 SSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
SS L+ +FQ FGP+KELR+TP KK+QRF+EF+D+RDAAKALK MNG+EI GK VVIEFS
Sbjct: 175 SSDQLRRLFQPFGPIKELRDTPWKKNQRFVEFFDIRDAAKALKHMNGKEIDGKQVVIEFS 234
Query: 301 RPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSADPPSYSPRSFASQAPHFRK 360
RPGGH++KFF+ +S + LN++ +PR +SQ K
Sbjct: 235 RPGGHTRKFFHHHSKTTVPPLNFN----------------------APRLHSSQ-----K 267
Query: 361 KSPSNSFKGNPNNVNVTCSIEPSVASLSLA 390
KSP G+P+ N T SI+ + S+SL
Sbjct: 268 KSP-----GSPS--NSTGSIDAEMGSMSLT 290
>gi|296081396|emb|CBI16829.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 111/139 (79%), Gaps = 5/139 (3%)
Query: 197 LPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVK 256
LPPPARGL+AGR VWAQF++P + D NQGT+V+FNLDS VS+S+L++IF+ FG +K
Sbjct: 40 LPPPARGLIAGRAVWAQFMIPVSTCMLDDYNQGTLVIFNLDSEVSTSSLRDIFETFGSIK 99
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
ELRETPLK+HQRF+EF+D+RDAA+AL+EMNG++I GK VVIEFSRPGGH +FF N+
Sbjct: 100 ELRETPLKRHQRFVEFFDIRDAARALREMNGKKIQGKRVVIEFSRPGGHGWRFF--NAIK 157
Query: 317 CASSLN---YSTIYQTRNS 332
+S N +S + QT +S
Sbjct: 158 KSSHFNVPPHSYLSQTHHS 176
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 1 MGETGISRFQGNLDPRAQEFRPTTLFRPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVG 60
MGETG SRF GNLDP AQEFRP + Q+ + P PP + + G
Sbjct: 1 MGETGTSRFLGNLDPSAQEFRPRNPYIQNQMSLSHLLVPLP--PP-----ARGLIAGRAV 53
Query: 61 YAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEG 120
+AQ+ P L + G TLV+ + +VS + +R E FG ++ ++ L
Sbjct: 54 WAQFMI-PVSTCMLDDYNQG---TLVIFNLDSEVSTSSLRDIFETFGSIKELRETPLKRH 109
Query: 121 IVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMN 165
V F+D+R A A +E+ + +Q ++ P G N
Sbjct: 110 QRFVEFFDIRDAARALREMNGKKIQGKRVVIEFSRPGGHGWRFFN 154
>gi|356569215|ref|XP_003552800.1| PREDICTED: protein terminal ear1-like [Glycine max]
Length = 539
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 160/313 (51%), Gaps = 97/313 (30%)
Query: 1 MGETGI-SRFQGNLDPRAQEFRPTTLFRPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGV 59
MGETGI FQGNLDPRA+EFRP L +YP
Sbjct: 1 MGETGIIVSFQGNLDPRAEEFRPLNL---QCQWYP------------------------- 32
Query: 60 GYAQYPTHPQLGVPLPPP-STGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+PLP P ST TR+L+L+ +P S + +R +L+ FG++R +Q +
Sbjct: 33 ------------LPLPTPLSTSSTRSLLLTPLPF-TSHSALRAELQAFGDIRALQTD--- 76
Query: 119 EGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCY 178
LRH G+ L +
Sbjct: 77 ---------SLRH----------------------------GI-----------LTVHFF 88
Query: 179 DNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDS 238
D + + + S P + L++ P+ A +++P+ NA PD +NQGT+V+FNL
Sbjct: 89 DLRHAESAFAAIRSMHLHFP---QFLLSAHPISAHYVLPSSNAFPDAHNQGTLVIFNLHP 145
Query: 239 GVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
+S+ L+ +FQ FGP+KELR+TP KK+QRF+EF+D+RDAAKALK MNG+EI+GK VVIE
Sbjct: 146 NLSTVQLRRLFQPFGPIKELRDTPWKKNQRFVEFFDIRDAAKALKHMNGKEIHGKQVVIE 205
Query: 299 FSRPGGHSKKFFY 311
FSRPGGH++KFF+
Sbjct: 206 FSRPGGHTRKFFH 218
>gi|345105435|gb|AEN71548.1| terminal EAR1-like 2 [Physcomitrella patens]
Length = 1029
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 155/241 (64%), Gaps = 9/241 (3%)
Query: 76 PPSTGP---TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER-LMEGIVTVHFYDLRH 131
PP +G +R ++L+ VP +S+ ++ ++ +G+VR + +R L+EG+VTV+FYDLR
Sbjct: 336 PPISGREHVSRAILLNGVPASLSDEQLKVEMGKWGDVRTIVSDRKLVEGLVTVNFYDLRC 395
Query: 132 AEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAE--SLMI 189
A+ A ++I++QH+ +Q + S +N+ +++ A ++ Q + L+
Sbjct: 396 AKDALRDIQQQHLN-KQHRMQQQYQLSQKQRGVNSSSSSRENADMAFERQDAVKHPELLP 454
Query: 190 MNSYAPVLPP-PARGLVAGRPVWAQFIVPTCNAV-PDGNNQGTIVVFNLDSGVSSSTLKE 247
++ + +P A+GLV G +WAQ+ +P A PDG NQGT+VVFNLD + LK
Sbjct: 455 ESTGSSSMPSHSAKGLVCGIVMWAQYTLPIGAAAGPDGLNQGTLVVFNLDVDTTMECLKS 514
Query: 248 IFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSK 307
+F+ +G VKELRETP KK +F+EF+DVRDAAKALK ++G EI+GK V IEFSRPGG +
Sbjct: 515 VFEVYGDVKELRETPAKKQHKFVEFFDVRDAAKALKALDGTEIHGKRVKIEFSRPGGQAH 574
Query: 308 K 308
K
Sbjct: 575 K 575
>gi|345105433|gb|AEN71547.1| terminal EAR1-like 1 [Physcomitrella patens]
Length = 1021
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 148/244 (60%), Gaps = 16/244 (6%)
Query: 76 PPSTGP---TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER-LMEGIVTVHFYDLRH 131
PP +G +R ++L+ VP VS+ ++ ++ +G+VR + +R L EG+VTV+FYDLR
Sbjct: 330 PPISGREHVSRAILLNGVPAYVSDDQLKAEMGKWGDVRTIVSDRKLTEGLVTVNFYDLRC 389
Query: 132 AEMAFKEIREQHMQLQ---QQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLM 188
A+ A ++I++QH+ Q QQ Y G + N++ + Y+ Q +
Sbjct: 390 AKEALRDIQQQHLNKQHRMQQQYQFSQKLREG-----SSNSSRDHVEMAYERQDGGKRPD 444
Query: 189 IM-NSYAPVLPP--PARGLVAGRPVWAQFIVPTCNAV-PDGNNQGTIVVFNLDSGVSSST 244
++ +S + P +GLV G +WAQ+ +P A PD NQGT+VVFNLD +
Sbjct: 445 LLPDSISSSSTPTNSGKGLVCGVVMWAQYTLPIGAAAGPDSLNQGTLVVFNLDVDTTMEC 504
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
LK IF+ G VKELRETP KK +F+EF+DVRDAAKALK ++G EI GK V IEFSRPGG
Sbjct: 505 LKSIFEVHGDVKELRETPAKKQHKFVEFFDVRDAAKALKALDGTEINGKRVKIEFSRPGG 564
Query: 305 HSKK 308
+ K
Sbjct: 565 QAHK 568
>gi|357463193|ref|XP_003601878.1| Terminal ear1-like 2 protein [Medicago truncatula]
gi|355490926|gb|AES72129.1| Terminal ear1-like 2 protein [Medicago truncatula]
Length = 524
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 166/323 (51%), Gaps = 64/323 (19%)
Query: 36 GAASPPTLPPYPSNDVQVVPFGGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVS 95
G PT P + N +P VG YP P P P ST PTR+++LS P
Sbjct: 2 GETLNPTAPEFNPNSYIPIPVA-VGIP-YPYPPYAVTPPPHLSTIPTRSILLSPAP-PTP 58
Query: 96 ETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKN 155
ET +R+DL FGEVR VQ + G++T H+YDLRHAE AF IR H
Sbjct: 59 ETDLRKDLSAFGEVRAVQTDSFRNGVITAHYYDLRHAETAFAAIRTHH------------ 106
Query: 156 PYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFI 215
+ Y N + + + LPPP GLVAG P+WA ++
Sbjct: 107 -----------------VLCAAYFNPLSYSQI-----FPTPLPPPPPGLVAGAPLWAHYV 144
Query: 216 VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKK-HQRFIEFYD 274
+ D NQGT+VVFNLD VSS L+++F AFG +KE+R+TP KK +Q F+EF+D
Sbjct: 145 LS------DAQNQGTLVVFNLDDDVSSDQLQQVFGAFGAIKEVRDTPWKKRNQSFVEFFD 198
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDC 334
+RDA KALKE+NG+EI GK + IEFS+P K F++ ++ S+ + N +
Sbjct: 199 IRDAEKALKELNGKEINGKPIAIEFSKP-----KLFHSEPNAYISNKPF-------NYNL 246
Query: 335 PPPPLSADPPSYSPRSFASQAPH 357
PPP SPR + PH
Sbjct: 247 NPPP--------SPRRHFASQPH 261
>gi|168023300|ref|XP_001764176.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684616|gb|EDQ71017.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 142/255 (55%), Gaps = 45/255 (17%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER-LMEGIVTVHFYDLRHAEMAFKEIR 140
+R ++L+ VP VS+ ++ ++ +G+VR + +R L EG+VTV+FYDLR A+ A ++I+
Sbjct: 27 SRAILLNGVPAYVSDDQLKAEMGKWGDVRTIVSDRKLTEGLVTVNFYDLRCAKEALRDIQ 86
Query: 141 EQHM--QLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLP 198
+QH+ Q + Q + P +SG
Sbjct: 87 QQHLNKQHRMQQHSSSTPTNSG-------------------------------------- 108
Query: 199 PPARGLVAGRPVWAQFIVPTCNAV-PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE 257
+GLV G +WAQ+ +P A PD NQGT+VVFNLD + LK IF+ G VKE
Sbjct: 109 ---KGLVCGVVMWAQYTLPIGAAAGPDSLNQGTLVVFNLDVDTTMECLKSIFEVHGDVKE 165
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
LRETP KK +F+EF+DVRDAAKALK ++G EI GK V IEFSRPGG + K + S
Sbjct: 166 LRETPAKKQHKFVEFFDVRDAAKALKALDGTEINGKRVKIEFSRPGGQAHKALSSRRSKR 225
Query: 318 ASSLNYSTIYQTRNS 332
+S+N + + +S
Sbjct: 226 NTSVNGNVCFGKLDS 240
>gi|296081334|emb|CBI17716.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 26/227 (11%)
Query: 114 MERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNL 173
MERL +GIV VHFYDLRHAE A EI+EQ+MQ Q + L+ Y ML +
Sbjct: 1 MERLRDGIVIVHFYDLRHAEEAVMEIQEQYMQQQSR---LRRFYEYDAMLFGHLG----- 52
Query: 174 ATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNA-VPDGNNQGTIV 232
+ +SL++ ++ PARGL+AGR VWAQF P PDG+NQGT+V
Sbjct: 53 --------LERQSLVVPVAF------PARGLIAGRAVWAQFSAPESTTPTPDGHNQGTLV 98
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+ NLDS +S S LKEI Q FG VKE RE K+ + F+EF+D RDAA+A E++G+EIY
Sbjct: 99 ISNLDSKLSESKLKEIVQNFGHVKEFREMTPKQQKWFVEFFDTRDAARAFSELDGKEIYD 158
Query: 293 KHVVIEFSRPGGHSK---KFFYANSSSCASSLNYSTIYQTRNSDCPP 336
K ++I+FS GG+ + A +++ + +N I +R + C P
Sbjct: 159 KKLIIKFSCSGGYGRIKSSTAAATATTSYNDINSRKIIHSRTALCSP 205
>gi|168051966|ref|XP_001778423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670208|gb|EDQ56781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 434
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 128/229 (55%), Gaps = 44/229 (19%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER-LMEGIVTVHFYDLRHAEMAFKEIR 140
+R ++L+ VP +S+ ++ ++ +G+VR + +R L+EG+VTV+FYDLR A+ A ++I+
Sbjct: 33 SRAILLNGVPASLSDEQLKVEMGKWGDVRTIVSDRKLVEGLVTVNFYDLRCAKDALRDIQ 92
Query: 141 EQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPP 200
+QH+ Q + +
Sbjct: 93 QQHLNKQHRMQQQYQLSQKQRL-------------------------------------- 114
Query: 201 ARGLVAGRPVWAQFIVPTCNAV-PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR 259
V G +WAQ+ +P A PDG NQGT+VVFNLD + LK +F+ +G VKELR
Sbjct: 115 ----VCGIVMWAQYTLPIGAAAGPDGLNQGTLVVFNLDVDTTMECLKSVFEVYGDVKELR 170
Query: 260 ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
ETP KK +F+EF+DVRDAAKALK ++G EI+GK V IEFSRPGG + K
Sbjct: 171 ETPAKKQHKFVEFFDVRDAAKALKALDGTEIHGKRVKIEFSRPGGQAHK 219
>gi|302763791|ref|XP_002965317.1| hypothetical protein SELMODRAFT_406603 [Selaginella moellendorffii]
gi|300167550|gb|EFJ34155.1| hypothetical protein SELMODRAFT_406603 [Selaginella moellendorffii]
Length = 578
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 131/235 (55%), Gaps = 23/235 (9%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLME-GIVTVHFYDLRHAEMAFKEIR 140
+R+L+L +P + ++ LE +G +R + + E GIV H+ D+RHA A K+I
Sbjct: 138 SRSLILGNIPYPIDPGQLQSQLEQWGALRYISFAAMAERGIVIAHYCDVRHAAQALKDIH 197
Query: 141 EQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP- 199
QH+ +QQ + L+L D+ ++ A I + A +
Sbjct: 198 AQHL-IQQHKF---------LLLRRMDHFQRAWRHAAREDAKSAARRQIEVTRAALRAAG 247
Query: 200 ----PARGLVAGRPVWAQFIVPTCNAV------PDGNNQGTIVVFNLDSGVSSSTLKEIF 249
RGLV G +WA+F VP C V P+ NQGT+VVFNLD +S T+ +F
Sbjct: 248 EKLRRERGLVCGAALWAKF-VPLCCCVSEKEEFPEMENQGTLVVFNLDVAISIETINSVF 306
Query: 250 QAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+ +G VKE+RETP+K+ +F+EF+DVRDAA+A + ++G++I G V IEFSRPGG
Sbjct: 307 KKYGDVKEIRETPIKRTHKFVEFFDVRDAARAKEALDGEDILGSTVKIEFSRPGG 361
>gi|148927336|gb|ABR19817.1| terminal ear1-like 1 protein [Populus tremula x Populus alba]
Length = 580
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 113/213 (53%), Gaps = 61/213 (28%)
Query: 221 AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGP-------------------------- 254
AVPDG NQGT+VVFNLD VS+ LKE FQAFG
Sbjct: 63 AVPDGQNQGTLVVFNLDPNVSTKCLKETFQAFGKLFVLFWGFFEVLVLLVQVRLLETFVD 122
Query: 255 -------------------VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
VKELRETPLK+HQRF+EFYDVRDAAKAL EMNG+EIYGK V
Sbjct: 123 YFLPANCFLFLTFSHWAGAVKELRETPLKRHQRFVEFYDVRDAAKALGEMNGKEIYGKQV 182
Query: 296 VIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRN---------SDCPPPPL------S 340
IEFSRPGG+ KKFF AN+++ +S + I T + + P PPL
Sbjct: 183 DIEFSRPGGYGKKFFNANTTTSKTSFSAPAINSTTSLNRSRISTYASPPSPPLLRRFSSG 242
Query: 341 ADPPSYSPRSFASQAPHFRKKSPS-NSFKGNPN 372
P+ SPRSF S+ K PS N KGNPN
Sbjct: 243 CSSPNISPRSFLSETHSSAGKKPSGNPGKGNPN 275
>gi|414879122|tpg|DAA56253.1| TPA: terminal ear1 [Zea mays]
Length = 664
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 157/306 (51%), Gaps = 46/306 (15%)
Query: 13 LDPRAQEFRPTTLF------RPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVGYAQYPT 66
LD AQEF PT P Q+Y P+ + P PP +Q VP + A
Sbjct: 20 LDAAAQEFHPTVCAPYPLQPLPQQLYCPHPYPAMPVPPPPQIAMLQPVPPMAMAMA---- 75
Query: 67 HPQLGVPLP---PPSTGPT-RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGI 121
PQ G LP P GP+ R +VL VP E V + + FG +R V + EG+
Sbjct: 76 -PQPGYTLPTTTPVVNGPSSRVVVLGLVPPHAQEADVAQAMAPFGAIRSVDACAVASEGV 134
Query: 122 VTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQ 181
TVHF+D+R AE+A +REQHM+ Q + L Y++ + A +D
Sbjct: 135 ATVHFFDIRAAELALTCVREQHMRQQSR---LGQLYAAAAVAPAWAPAPTPQA---WD-- 186
Query: 182 VVAESLMIMNSYAPVLPPP---ARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDS 238
P P RGLV G VWA F DG+N+G++VV +
Sbjct: 187 ---------------WPHPNDDGRGLVLGHAVWAHF----ATGADDGDNRGSLVVLSPLP 227
Query: 239 GVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
GVS + L+++FQAFG +K++RE+ + +F++F+D RDAA+AL E+NGQE++G+ +V+E
Sbjct: 228 GVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQELFGRRLVVE 287
Query: 299 FSRPGG 304
F+RP G
Sbjct: 288 FTRPSG 293
>gi|162460263|ref|NP_001104903.1| protein terminal ear1 [Zea mays]
gi|75318510|sp|O65001.1|TE1_MAIZE RecName: Full=Protein terminal ear1
gi|13540340|gb|AAK29419.1|AF348319_1 TERMINAL EAR1 [Zea mays]
gi|3153237|gb|AAC39463.1| terminal ear1 [Zea mays]
Length = 656
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 160/315 (50%), Gaps = 47/315 (14%)
Query: 5 GISRFQGNL-DPRAQEFRPTTLF------RPPQVYYPYGAASPPTLPPYPSNDVQVVPFG 57
G GNL D AQEF PT P Q+Y P+ + P PP +Q VP
Sbjct: 3 GFPEATGNLLDAAAQEFHPTVCAPYPLQPLPQQLYCPHPYPAMPVPPPPQIAMLQPVPPM 62
Query: 58 GVGYAQYPTHPQLGVPLP---PPSTGPT-RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQ 113
+ A PQ G LP P GP+ R +VL VP E V + + FG +R V
Sbjct: 63 AMAMA-----PQPGYTLPTTTPVVNGPSSRVVVLGLVPPHAQEADVAQAMAPFGAIRSVD 117
Query: 114 MERLM-EGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNN 172
+ EG+ TVHF+D+R AE+A +REQHM+ Q + L Y++ +
Sbjct: 118 ACAVASEGVATVHFFDIRAAELALTCVREQHMRQQSR---LGQLYAAAAVAPAWAPAPTP 174
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPP---ARGLVAGRPVWAQFIVPTCNAVPDGNNQG 229
A +D P P RGLV G VWA F DG+N+G
Sbjct: 175 QA---WD-----------------WPHPNDDGRGLVLGHAVWAHF----ATGADDGDNRG 210
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
++VV + GVS + L+++FQAFG +K++RE+ + +F++F+D RDAA+AL E+NGQE
Sbjct: 211 SLVVLSPLPGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQE 270
Query: 290 IYGKHVVIEFSRPGG 304
++G+ +V+EF+RP G
Sbjct: 271 LFGRRLVVEFTRPSG 285
>gi|242055329|ref|XP_002456810.1| hypothetical protein SORBIDRAFT_03g043230 [Sorghum bicolor]
gi|241928785|gb|EES01930.1| hypothetical protein SORBIDRAFT_03g043230 [Sorghum bicolor]
Length = 666
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 150/303 (49%), Gaps = 40/303 (13%)
Query: 13 LDPRAQEFRPTTLF------RPPQVYYPYGAASPPTLPPYPSNDVQVVPFGGVGYAQYPT 66
LD AQEF PT P Q+Y P+ + P +Q VP + P
Sbjct: 20 LDAAAQEFHPTVCAPYPLQPLPHQLYCPHTYPAMPPP--PQMAMLQPVPPMAM-----PM 72
Query: 67 HPQLGVPLP---PPSTGPT-RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGI 121
PQ G LP P GP+ R +VL VP E V + + FG +R + EG+
Sbjct: 73 APQPGYTLPTTAPVVDGPSSRVVVLCLVPPHAQERDVAQAMAPFGAIRSADACAVASEGV 132
Query: 122 VTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQ 181
TVHF+D+R AE+A +REQHM+ Q + L + + N
Sbjct: 133 ATVHFFDIRAAELAVACVREQHMRQQSRLGQLYAAAAVPPAWAPAPPTAPQAWDWPHPND 192
Query: 182 VVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVS 241
RGLV G+ VWA F P + DG N+G++VV + GVS
Sbjct: 193 ------------------DGRGLVLGQVVWAHF-APGAD---DGENRGSLVVLSPLPGVS 230
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L+++FQAFG +K++RE+ + +FI+F+D RDAA+AL E+NGQE++G+ +VIEF+R
Sbjct: 231 VADLRQVFQAFGDLKDVRESAHRPSHKFIDFFDTRDAARALAELNGQELFGRRLVIEFTR 290
Query: 302 PGG 304
P G
Sbjct: 291 PSG 293
>gi|158512875|sp|A2WY46.1|PLA2_ORYSI RecName: Full=Protein terminal ear1 homolog; AltName: Full=Protein
LEAFY HEAD2; AltName: Full=Protein PLASTOCHRON2
gi|88703264|gb|ABD49441.1| leafy head 2 [Oryza sativa]
gi|125528778|gb|EAY76892.1| hypothetical protein OsI_04851 [Oryza sativa Indica Group]
Length = 680
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 46/249 (18%)
Query: 68 PQLGVPLPPPST---GP-TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGIV 122
PQ G +P +T GP +R +VLS VP E + R + FG VR V + EG+
Sbjct: 79 PQPGYCVPAAATVVDGPASRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVA 138
Query: 123 TVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQV 182
TV+F+DLR AE A +REQH++ Q C Q+
Sbjct: 139 TVYFFDLRSAEHAVTGVREQHIRQQ-----------------------------CRLGQL 169
Query: 183 VAESLMIMNSYAPVLPPPA--------RGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVV 233
A + S +P PPPA RGLV G+ VWA F + VPD G ++G++VV
Sbjct: 170 YAAAAAAAAS-SPTWPPPAWDWPHDDNRGLVLGQAVWAHFA--AASTVPDDGASRGSLVV 226
Query: 234 FNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
N +S L+EIFQA+G VK++RE+ L+ +F+EF+D RDA +AL E+NG+E++G+
Sbjct: 227 LNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGR 286
Query: 294 HVVIEFSRP 302
+V+E++RP
Sbjct: 287 RLVVEYTRP 295
>gi|115441719|ref|NP_001045139.1| Os01g0907900 [Oryza sativa Japonica Group]
gi|122234870|sp|Q0JGS5.1|EAR1_ORYSJ RecName: Full=Protein terminal ear1 homolog; AltName:
Full=MEI2-like protein 1; Short=OML1; AltName:
Full=Protein LEAFY HEAD2; AltName: Full=Protein
PLASTOCHRON2
gi|20804887|dbj|BAB92568.1| putative terminal ear1 [Oryza sativa Japonica Group]
gi|56785112|dbj|BAD82750.1| putative terminal ear1 [Oryza sativa Japonica Group]
gi|88193633|dbj|BAE79763.1| PLASTOCHRON2 [Oryza sativa Japonica Group]
gi|113534670|dbj|BAF07053.1| Os01g0907900 [Oryza sativa Japonica Group]
Length = 683
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 46/249 (18%)
Query: 68 PQLGVPLPPPST---GP-TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGIV 122
PQ G +P +T GP +R +VLS VP E + R + FG VR V + EG+
Sbjct: 79 PQPGYCVPAAATVVDGPASRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVA 138
Query: 123 TVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQV 182
TV+F+DLR AE A +REQH++ Q C Q+
Sbjct: 139 TVYFFDLRSAEHAVTGVREQHIRQQ-----------------------------CRLGQL 169
Query: 183 VAESLMIMNSYAPVLPPPA--------RGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVV 233
A + S +P PPPA RGLV G+ VWA F + VPD G ++G++VV
Sbjct: 170 YAAAAAAAAS-SPTWPPPAWDWPHDDNRGLVLGQAVWAHFA--AASTVPDDGASRGSLVV 226
Query: 234 FNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
N +S L+EIFQA+G VK++RE+ L+ +F+EF+D RDA +AL E+NG+E++G+
Sbjct: 227 LNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGR 286
Query: 294 HVVIEFSRP 302
+V+E++RP
Sbjct: 287 RLVVEYTRP 295
>gi|125573037|gb|EAZ14552.1| hypothetical protein OsJ_04474 [Oryza sativa Japonica Group]
Length = 683
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 46/249 (18%)
Query: 68 PQLGVPLPPPST---GP-TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGIV 122
PQ G +P +T GP +R +VLS VP E + R + FG VR V + EG+
Sbjct: 79 PQPGYCVPAAATVVDGPASRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVA 138
Query: 123 TVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQV 182
TV+F+DLR AE A +REQH++ Q C Q+
Sbjct: 139 TVYFFDLRSAEHAVTGVREQHIRQQ-----------------------------CRLGQL 169
Query: 183 VAESLMIMNSYAPVLPPPA--------RGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVV 233
A + S +P PPPA RGLV G+ VWA F + VPD G ++G++VV
Sbjct: 170 YAAAAAAAAS-SPTWPPPAWDWPHDDNRGLVLGQAVWAHFA--AASTVPDDGASRGSLVV 226
Query: 234 FNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
N +S L+EIFQA+G VK++RE+ L+ +F+EF+D RDA +AL E+NG+E++G+
Sbjct: 227 LNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGR 286
Query: 294 HVVIEFSRP 302
+V+E++RP
Sbjct: 287 RLVVEYTRP 295
>gi|357131498|ref|XP_003567374.1| PREDICTED: protein terminal ear1-like [Brachypodium distachyon]
Length = 685
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 25/224 (11%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERL-MEGIVTVHFYDLRHAEMAFKEIR 140
+R +VLS VP E V R + FG VR V + E + TVHF+DLR AE+A +R
Sbjct: 98 SRAVVLSLVPPHAQEGDVARAMAAFGAVRAVDASAVPSERVATVHFFDLRAAELAVAAVR 157
Query: 141 EQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPP 200
QHM+ Q + L S +D+ +
Sbjct: 158 AQHMRQQCRLSQLYAATVSWPPSAAGPGPAPAAWDWPHDDIL------------------ 199
Query: 201 ARGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVVFN-LDSGVSSSTLKEIFQAFGPVKEL 258
GLV G+ VWAQF + +PD G ++G++VV N L VS L++ FQAFG +K+L
Sbjct: 200 --GLVLGQAVWAQFA--AASTLPDDGFSRGSLVVLNSLPDDVSLLELRQAFQAFGDLKDL 255
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
R++P + +F+EF+D RDAA+AL E+NGQ+ +G +V+EF+RP
Sbjct: 256 RQSPHRPSHKFVEFFDTRDAARALAELNGQDFFGHRLVLEFTRP 299
>gi|302754256|ref|XP_002960552.1| hypothetical protein SELMODRAFT_75352 [Selaginella moellendorffii]
gi|300171491|gb|EFJ38091.1| hypothetical protein SELMODRAFT_75352 [Selaginella moellendorffii]
Length = 530
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 49/224 (21%)
Query: 80 GPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEI 139
P+R L++S +P + + +V +DLE +G +R + +G +TV++YDLRHA+ A I
Sbjct: 4 APSRALLVSGIPQHIVDPLVMQDLESWGPIRSFFLGARAQGCITVYYYDLRHAQDALLSI 63
Query: 140 REQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP 199
R Q+ SY
Sbjct: 64 RSQYFFQHDLSYS----------------------------------------------- 76
Query: 200 PARGLVAGRPVWAQFI-VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL 258
RGL+ G P WA+F+ + + D NQGT+VVF L ++ + L IF+ +G V+E+
Sbjct: 77 EGRGLIGGYPAWAEFVTISPSYPLIDSPNQGTLVVFYLRMNITHAELASIFKQYGDVREI 136
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
RE P ++ RF+EFYD+RDAA+A + ++G E+ G+ + IEFSRP
Sbjct: 137 REAPSRR-SRFVEFYDIRDAARAKEALDGVEVLGRRIKIEFSRP 179
>gi|302771554|ref|XP_002969195.1| hypothetical protein SELMODRAFT_92001 [Selaginella moellendorffii]
gi|300162671|gb|EFJ29283.1| hypothetical protein SELMODRAFT_92001 [Selaginella moellendorffii]
Length = 529
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 49/224 (21%)
Query: 80 GPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEI 139
P+R L++S +P + + +V +DLE +G +R + +G +TV++YDLRHA+ A I
Sbjct: 4 APSRALLVSGIPQHIVDPLVMQDLESWGPIRSFFLGARAQGCITVYYYDLRHAQDALLSI 63
Query: 140 REQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP 199
R Q+ SY
Sbjct: 64 RSQYFFQHDLSYS----------------------------------------------- 76
Query: 200 PARGLVAGRPVWAQFI-VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL 258
RGL+ G P WA+F+ + + D NQGT+VVF L ++ + L IF+ +G V+E+
Sbjct: 77 EGRGLIGGCPAWAEFVTISPSYPLIDSPNQGTLVVFYLRMNITHAELASIFKQYGDVREI 136
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
RE P ++ RF+EFYD+RDAA+A + ++G E+ G+ + IEFSRP
Sbjct: 137 REAPSRR-SRFVEFYDIRDAARAKEALDGLEVLGRRIKIEFSRP 179
>gi|452820224|gb|EME27269.1| RNA-binding protein [Galdieria sulphuraria]
Length = 998
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 49/230 (21%)
Query: 78 STGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGV---QMERLMEGIVTVHFYDLRHAEM 134
S P+RT+++ +P V ++ +R LE FG +R + Q R G + ++DLRHA
Sbjct: 494 SETPSRTVLVKNIPPGVDDSELRCLLERFGPLRDLGAQQRSRGGRGAIQATYFDLRHARE 553
Query: 135 AFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYA 194
A N L + + + ++ + +
Sbjct: 554 AV----------------------------------NLLPKVSFHGRYLEVRFILSSETS 579
Query: 195 PVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGP 254
P L P + + F N GT+VVFNLDS +++ L+++F +G
Sbjct: 580 PALNEPMKKGIHSTNSATHF------------NNGTLVVFNLDSNITADELRKVFGEYGD 627
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+KE+RE+P KKH +FIEFYDVRDA AL ++N E+ GK + IE SRPGG
Sbjct: 628 IKEIRESPHKKHHKFIEFYDVRDAEVALHKLNKTEVSGKKIKIEISRPGG 677
>gi|297740630|emb|CBI30812.3| unnamed protein product [Vitis vinifera]
Length = 787
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 280 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 339
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A AL+ +N +I GK + +E SRPGG + + + S +
Sbjct: 340 KFIEFYDVRAAEAALRSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRSFRH 399
Query: 328 QTRNSDCPPPPLS----ADPPSYSPRSFASQAPHFRKKSPSNS 366
+ PP S + P +SP S++P FR SP+ S
Sbjct: 400 HVGSPMANSPPGSWAQFSSPIEHSPLQSLSKSPGFRTVSPTTS 442
>gi|225463378|ref|XP_002271605.1| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
Length = 860
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 256 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 315
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A AL+ +N +I GK + +E SRPGG + + + S +
Sbjct: 316 KFIEFYDVRAAEAALRSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRSFRH 375
Query: 328 QTRNSDCPPPPLS----ADPPSYSPRSFASQAPHFRKKSPSNS 366
+ PP S + P +SP S++P FR SP+ S
Sbjct: 376 HVGSPMANSPPGSWAQFSSPIEHSPLQSLSKSPGFRTVSPTTS 418
>gi|47834701|gb|AAT39004.1| AML1 [Citrus unshiu]
Length = 858
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 4/163 (2%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 257 RKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A ALK +N +I GK + +E SRPGG + + + +
Sbjct: 317 KFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQH 376
Query: 328 QTRNSDCPPPPLS----ADPPSYSPRSFASQAPHFRKKSPSNS 366
Q + PP + + P ++P S++P+FR SP+ S
Sbjct: 377 QVGSPITNSPPGNWVQFSSPIEHNPLQTISKSPNFRNMSPTTS 419
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ +R E +G++R + G V + +YD+R A A + ++
Sbjct: 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 250
Query: 141 EQ 142
+
Sbjct: 251 NK 252
>gi|47834689|gb|AAT38998.1| AML1 [Medicago truncatula]
Length = 856
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 262 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 321
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A ALK +N +I GK + +E SRPGG + S +
Sbjct: 322 KFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRS 381
Query: 328 QTRNSDCPPPPLS----ADPPSYSPRSFASQAPHFRKKSPSNSFKGNPNNVNVTCSIEPS 383
Q + PP S P +P S++P SP+N G ++ S P
Sbjct: 382 QVGSPIANSPPGSWAHFGSPVDPNPLGSYSKSPGLGHASPTNHLSGLAAILSPHTSTSPK 441
Query: 384 VA 385
+A
Sbjct: 442 IA 443
>gi|168056145|ref|XP_001780082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668485|gb|EDQ55091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L++IF A+G VKE+RETP K+H
Sbjct: 112 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHH 171
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 172 KFIEFYDVRSAEAALRALNRSDIAGKRIKLEPSRPGGARRSLL 214
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V + LK++F+ +G ++ L KH+ F I +YD+R A A++ +
Sbjct: 49 TLFVRNINSNVEDTELKQLFEQYGAIRTLYTAC--KHRGFVMISYYDIRAARSAMRALQN 106
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 107 KPLRRRKLDIHFSIP 121
>gi|356526987|ref|XP_003532096.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 856
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 263 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 322
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A ALK +N +I GK + +E SRPGG + S + +
Sbjct: 323 KFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRH 382
Query: 328 QTRNSDCPPPPLS----ADPPSYSPRSFASQAPHFRKKSPSNS 366
Q + PP S P +P S S++P P N+
Sbjct: 383 QVDSPVASSPPGSWAQFGSPVEQNPLSSFSKSPGLGHAGPINT 425
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ +R E++G++R + G V + +YD+R A A + ++
Sbjct: 197 PSRTLFVRNINSNVEDSELRTLFELYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 256
Query: 141 EQ 142
+
Sbjct: 257 NK 258
>gi|255586946|ref|XP_002534073.1| RNA-binding protein, putative [Ricinus communis]
gi|223525900|gb|EEF28317.1| RNA-binding protein, putative [Ricinus communis]
Length = 779
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 188 MIMNSYAPVLPPPA--RGL----VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVS 241
+M SY + A RGL + R + F +P N NQGT+VVFNLD+ VS
Sbjct: 194 FVMISYYDIRDARAAMRGLQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVS 253
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L++IF A+G VKE+RETP K+H +FIEFYDVR A AL+ +N +I GK + +E SR
Sbjct: 254 NDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRSAEAALRALNRSDIAGKRIKLEPSR 313
Query: 302 PGG 304
PGG
Sbjct: 314 PGG 316
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S LK +F+ +G ++ L KH+ F I +YD+RDA A++ +
Sbjct: 157 TLFVRNINSNVEDSELKSLFEQYGDIRTLYTAC--KHRGFVMISYYDIRDARAAMRGLQN 214
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 215 KPLRRRKLDIHFSIP 229
>gi|242094342|ref|XP_002437661.1| hypothetical protein SORBIDRAFT_10g000350 [Sorghum bicolor]
gi|241915884|gb|EER89028.1| hypothetical protein SORBIDRAFT_10g000350 [Sorghum bicolor]
Length = 822
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF A+G VKE+RETP KKH
Sbjct: 238 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGAYGEVKEIRETPNKKHH 297
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N EI GK + +E SRPGG + F
Sbjct: 298 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGGTRRNFM 340
>gi|255557439|ref|XP_002519750.1| RNA-binding protein, putative [Ricinus communis]
gi|223541167|gb|EEF42723.1| RNA-binding protein, putative [Ricinus communis]
Length = 723
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 263 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 322
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A ALK +N +I GK + +E SRPGG
Sbjct: 323 KFIEFYDVRSAESALKSLNRSDIAGKKIKLEPSRPGG 359
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V L+++F+ FG ++ L KH+ F I +YD+R A AL+ +
Sbjct: 200 TLFVRNINSNVEDIELRQLFEQFGDIRTLYTAC--KHRGFVMISYYDIRAARTALRALQN 257
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 258 KPLRRRKLDIHFSIP 272
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 76 PPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P P+RTL + + +V + +R+ E FG++R + G V + +YD+R A A
Sbjct: 192 PLGEHPSRTLFVRNINSNVEDIELRQLFEQFGDIRTLYTACKHRGFVMISYYDIRAARTA 251
Query: 136 FKEIREQ 142
+ ++ +
Sbjct: 252 LRALQNK 258
>gi|356530557|ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 862
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 258 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 317
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A ALK +N +I GK + +E SRPGG
Sbjct: 318 KFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 354
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ +R E +G++R + G V + +YD+R A A + ++
Sbjct: 192 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQ 251
Query: 141 EQHMQLQQ 148
+ ++ ++
Sbjct: 252 NKPLRRRK 259
>gi|357450611|ref|XP_003595582.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355484630|gb|AES65833.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 764
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 159 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 218
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIE+YDVR A ALK +N +I GK + +E SRPGG + + + S Y
Sbjct: 219 KFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRY 278
Query: 328 QTRNSDCPPPPLSADPP 344
Q + PL+ PP
Sbjct: 279 QVGS------PLAGSPP 289
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V +T +R E +G++R + G V + +YD+R A A + ++
Sbjct: 93 PSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 152
Query: 141 EQHMQLQQ 148
+ ++ ++
Sbjct: 153 NKPLRRRK 160
>gi|356556525|ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 862
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 258 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 317
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A ALK +N +I GK + +E SRPGG
Sbjct: 318 KFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 354
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ +R E +G++R + G V + +YD+R A A + ++
Sbjct: 192 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 251
Query: 141 EQ 142
+
Sbjct: 252 NK 253
>gi|357450609|ref|XP_003595581.1| Polyadenylate-binding protein [Medicago truncatula]
gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]
gi|87241360|gb|ABD33218.1| RNA-binding region RNP-1 (RNA recognition motif); RNA recognition
motif 2 [Medicago truncatula]
gi|355484629|gb|AES65832.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 865
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 260 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 319
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIE+YDVR A ALK +N +I GK + +E SRPGG + + + S Y
Sbjct: 320 KFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRY 379
Query: 328 QTRNSDCPPPPLSADPP 344
Q + PL+ PP
Sbjct: 380 QVGS------PLAGSPP 390
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V +T +R E +G++R + G V + +YD+R A A + ++
Sbjct: 194 PSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 253
Query: 141 EQ 142
+
Sbjct: 254 NK 255
>gi|440804479|gb|ELR25356.1| RNA recognition motifdomain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1005
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 67/105 (63%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
+V GR + + +P N NQGT+VVFNLD + L EIF +G +KE+R TP
Sbjct: 312 VVRGRKLDIHYSIPKDNPSEKDQNQGTLVVFNLDPSTTDEELMEIFGQYGEIKEIRATPN 371
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
KKH +FIEF+DVR A KA+K +N EI GK + IE SRPGG +K
Sbjct: 372 KKHHKFIEFFDVRHAEKAMKCLNKTEIKGKKIKIEPSRPGGGVRK 416
>gi|356567420|ref|XP_003551918.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 857
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 263 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 322
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A ALK +N +I GK + +E SRPGG
Sbjct: 323 KFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGG 359
>gi|413953603|gb|AFW86252.1| hypothetical protein ZEAMMB73_610467 [Zea mays]
Length = 847
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF A+G VKE+RETP KKH
Sbjct: 262 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGAYGEVKEIRETPNKKHH 321
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 322 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 358
>gi|217075899|gb|ACJ86309.1| unknown [Medicago truncatula]
Length = 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L++IF A+G VKE+RETP K+H
Sbjct: 262 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHH 321
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A ALK +N +I GK + +E SRPGG
Sbjct: 322 KFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGG 358
>gi|47834685|gb|AAT38996.1| Mei2-like protein [Pinus taeda]
Length = 632
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 114 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNDDLRRIFGAYGEVKEIRETPHKRHH 173
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A +AL+ +N +I GK + +E SRPGG
Sbjct: 174 KFIEFYDVRAAEEALRALNKSDIAGKRIKLEPSRPGG 210
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 57 GGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER 116
GG G++ P V P P+RTL + + +V ++ +R E +G++R +
Sbjct: 24 GGAGHSGVSNVPATIVGEHPYGEHPSRTLFVRNINSNVEDSELRTYFEHYGDIRTLYTAC 83
Query: 117 LMEGIVTVHFYDLRHAEMAFKEIREQ 142
G V + +YD+R A A + ++ +
Sbjct: 84 KHRGFVMISYYDIRAARNAMRALQNK 109
>gi|413953604|gb|AFW86253.1| hypothetical protein ZEAMMB73_610467 [Zea mays]
Length = 772
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF A+G VKE+RETP KKH
Sbjct: 262 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGAYGEVKEIRETPNKKHH 321
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 322 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 358
>gi|357110952|ref|XP_003557279.1| PREDICTED: protein MEI2-like 2-like [Brachypodium distachyon]
Length = 845
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF A+G VKE+RETP KKH
Sbjct: 262 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEDVRQIFGAYGEVKEIRETPNKKHH 321
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 322 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 358
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ L KH+ F I ++D+R A A++ +
Sbjct: 199 TLFVRNINSNVEDSELRSLFEQFGDIRTLYTA--TKHRGFVMISYFDIRAARGAMRSLQN 256
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 257 KPLRRRKLDIHFSIP 271
>gi|148905976|gb|ABR16149.1| unknown [Picea sitchensis]
Length = 892
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 259 RKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNDDLRRIFGAYGEVKEIRETPHKRHH 318
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A +AL+ +N +I GK + +E SRPGG
Sbjct: 319 KFIEFYDVRAAEEALRALNKSDIAGKRIKLEPSRPGG 355
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 57 GGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMER 116
GG G+ P V P P+RTL + + +V ++ +R E +G++R +
Sbjct: 169 GGTGHPGVSNVPVTIVGEHPYGEHPSRTLFVRNINSNVEDSELRTYFEHYGDIRTLYTAC 228
Query: 117 LMEGIVTVHFYDLRHAEMAFKEIREQ 142
G V + +YD+R A A + ++ +
Sbjct: 229 KHRGFVMISYYDIRAARNAMRALQNK 254
>gi|413942544|gb|AFW75193.1| hypothetical protein ZEAMMB73_807044 [Zea mays]
gi|413942545|gb|AFW75194.1| hypothetical protein ZEAMMB73_807044 [Zea mays]
Length = 823
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF A+G VKE+RETP KKH
Sbjct: 238 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGAYGEVKEIRETPNKKHH 297
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 298 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 334
>gi|67474260|ref|XP_652879.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56469777|gb|EAL47493.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709489|gb|EMD48747.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 291
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N G+IVVFNLD ++++ + +IF FG +K++R+TP KKH RFIEF+D+R A KALK MN
Sbjct: 104 NHGSIVVFNLDETITNTLIHQIFSQFGEIKDIRQTPNKKHHRFIEFFDLRSAEKALKTMN 163
Query: 287 GQEIYGKHVVIEFSRPGGHSKKF 309
E+ GK + IEFSRPGG F
Sbjct: 164 KSELNGKKLKIEFSRPGGRETGF 186
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFK 137
T TL +S + +VS + LE FGE+ + E G + V +YD+R A++A K
Sbjct: 23 THTLFISNINSEVSSEAYYQLLESFGEIEAINFETKSRGFIIVTYYDIRSAKIAIK 78
>gi|297804374|ref|XP_002870071.1| hypothetical protein ARALYDRAFT_493056 [Arabidopsis lyrata subsp.
lyrata]
gi|297315907|gb|EFH46330.1| hypothetical protein ARALYDRAFT_493056 [Arabidopsis lyrata subsp.
lyrata]
Length = 756
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 188 MIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKE 247
+M SY + R L+ R + F +P N NQGT+VVFNL VS+ L+
Sbjct: 204 FVMISYHDI-----RKLIKRRKLDIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLEN 258
Query: 248 IFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
IF A+G +KE+RETP K+H +F+EF+DVR A ALK +N +I GK + +E SRPGG
Sbjct: 259 IFGAYGEIKEVRETPNKRHHKFVEFFDVRSADAALKALNRTDIAGKRIKLEHSRPGG 315
>gi|218190598|gb|EEC73025.1| hypothetical protein OsI_06961 [Oryza sativa Indica Group]
Length = 811
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+V+FNL+ VS+ L +IF AFG V+E+RETP K+H
Sbjct: 257 RKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
RFIEFYDVR A AL+ +N +I GK V +E SRPGG + F
Sbjct: 317 RFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPGGARRSF 358
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P+RTL + + +V ++ +R E FG++R + G V + +YD+RHA A
Sbjct: 191 PSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVMISYYDIRHARNA 245
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ + KH+ F I +YD+R A A +
Sbjct: 194 TLFVRNINSNVEDSELRSLFEPFGDIRSMYTA--TKHRGFVMISYYDIRHARNAKTALQS 251
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 252 KPLRRRKLDIHYSIP 266
>gi|115448333|ref|NP_001047946.1| Os02g0719800 [Oryza sativa Japonica Group]
gi|75325622|sp|Q6ZI17.1|OML2_ORYSJ RecName: Full=Protein MEI2-like 2; Short=OML2; AltName:
Full=MEI2-like protein 2
gi|45735834|dbj|BAD12869.1| putative meiosis protein mei2 [Oryza sativa Japonica Group]
gi|88193635|dbj|BAE79764.1| MEI2-like RNA binding protein [Oryza sativa Japonica Group]
gi|113537477|dbj|BAF09860.1| Os02g0719800 [Oryza sativa Japonica Group]
gi|215767055|dbj|BAG99283.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 848
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 10/125 (8%)
Query: 188 MIMNSYAPVLPPPARGLVAG--------RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSG 239
+M SY + ARG + G R + F +P N NQGT+V+FNLD
Sbjct: 235 FVMISYFDIRA--ARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLVIFNLDPS 292
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
VS+ +++IF +G VKE+RETP KKH +FIEFYDVR A AL+ +N EI GK + +E
Sbjct: 293 VSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAGKRIKLEP 352
Query: 300 SRPGG 304
SRPGG
Sbjct: 353 SRPGG 357
>gi|222622717|gb|EEE56849.1| hypothetical protein OsJ_06464 [Oryza sativa Japonica Group]
Length = 813
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+V+FNL+ VS+ L +IF AFG V+E+RETP K+H
Sbjct: 257 RKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
RFIEFYDVR A AL+ +N +I GK V +E SRPGG + F
Sbjct: 317 RFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPGGARRSF 358
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P+RTL + + +V ++ +R E FG++R + G V + +YD+RHA A
Sbjct: 191 PSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVMISYYDIRHARNA 245
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ + KH+ F I +YD+R A A +
Sbjct: 194 TLFVRNINSNVEDSELRSLFEPFGDIRSMYTA--TKHRGFVMISYYDIRHARNAKTALQS 251
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 252 KPLRRRKLDIHYSIP 266
>gi|115445799|ref|NP_001046679.1| Os02g0319100 [Oryza sativa Japonica Group]
gi|75323383|sp|Q6EQX3.1|OML5_ORYSJ RecName: Full=Protein MEI2-like 5; Short=OML5; AltName:
Full=MEI2-like protein 5
gi|50252721|dbj|BAD28947.1| putative AML1 [Oryza sativa Japonica Group]
gi|88193641|dbj|BAE79767.1| MEI2-like RNA binding protein [Oryza sativa Japonica Group]
gi|113536210|dbj|BAF08593.1| Os02g0319100 [Oryza sativa Japonica Group]
Length = 811
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+V+FNL+ VS+ L +IF AFG V+E+RETP K+H
Sbjct: 257 RKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
RFIEFYDVR A AL+ +N +I GK V +E SRPGG + F
Sbjct: 317 RFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPGGARRSF 358
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P+RTL + + +V ++ +R E FG++R + G V + +YD+RHA A
Sbjct: 191 PSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVMISYYDIRHARNA 245
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ + KH+ F I +YD+R A A +
Sbjct: 194 TLFVRNINSNVEDSELRSLFEPFGDIRSMYTA--TKHRGFVMISYYDIRHARNAKTALQS 251
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 252 KPLRRRKLDIHYSIP 266
>gi|168026214|ref|XP_001765627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168026222|ref|XP_001765631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683053|gb|EDQ69466.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683057|gb|EDQ69470.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 572
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 66/103 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L+ IF +G VKE+RETP K+H
Sbjct: 98 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDASVSNDELRLIFGVYGEVKEIRETPHKRHH 157
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 158 KFIEFYDVRSAEAALRALNRSDIAGKRIKLEPSRPGGARRSLL 200
>gi|407042499|gb|EKE41361.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 291
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 60/83 (72%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N G+IVVFNLD ++++ + +IF FG +K++R+TP KKH RFIEF+D R A KALK MN
Sbjct: 104 NHGSIVVFNLDETITNTLIHQIFSQFGEIKDIRQTPNKKHHRFIEFFDSRSAEKALKTMN 163
Query: 287 GQEIYGKHVVIEFSRPGGHSKKF 309
E+ GK + IEFSRPGG F
Sbjct: 164 KSELNGKKLKIEFSRPGGRETGF 186
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFK 137
T TL +S + +VS + LE FGE+ + E G + V +YD+R A++A K
Sbjct: 23 THTLFISNINSEVSSEAYYQLLESFGEIEAISFETKSRGFIIVTYYDIRSAKIAIK 78
>gi|218191474|gb|EEC73901.1| hypothetical protein OsI_08719 [Oryza sativa Indica Group]
Length = 955
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 201 ARGLVAG--------RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAF 252
ARG + G R + F +P N NQGT+V+FNLD VS+ +++IF +
Sbjct: 353 ARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTY 412
Query: 253 GPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
G VKE+RETP KKH +FIEFYDVR A AL+ +N EI GK + +E SRPGG +
Sbjct: 413 GEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGGTRRNLM 470
>gi|222623563|gb|EEE57695.1| hypothetical protein OsJ_08169 [Oryza sativa Japonica Group]
Length = 955
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 201 ARGLVAG--------RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAF 252
ARG + G R + F +P N NQGT+V+FNLD VS+ +++IF +
Sbjct: 353 ARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTY 412
Query: 253 GPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
G VKE+RETP KKH +FIEFYDVR A AL+ +N EI GK + +E SRPGG +
Sbjct: 413 GEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGGTRRNLM 470
>gi|47834699|gb|AAT39003.1| AML15 [Triticum aestivum]
Length = 870
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF +G VKE+RETP KKH
Sbjct: 275 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHH 334
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 335 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 371
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ L KH+ F I ++D+R A A++ +
Sbjct: 212 TLFVRNINSNVEDSELRSLFEQFGDIRTLYTA--TKHRGFVMISYFDIRAARGAMRSLQN 269
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 270 KPLRRRKLDIHFSIP 284
>gi|326490411|dbj|BAJ84869.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528339|dbj|BAJ93351.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF +G VKE+RETP KKH
Sbjct: 272 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHH 331
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 332 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 368
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ L KH+ F I ++D+R A A++ +
Sbjct: 209 TLFVRNINSNVEDSELRSLFEQFGDIRTLYTA--TKHRGFVMISYFDIRAARGAMRSLQN 266
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 267 KPLRRRKLDIHFSIP 281
>gi|42571201|ref|NP_973674.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|145331103|ref|NP_001078043.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|330255089|gb|AEC10183.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|330255090|gb|AEC10184.1| MEI2-like 2 protein [Arabidopsis thaliana]
Length = 830
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 214 LYTACKSRGFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLV 273
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FN+D+ VS+ L ++F A+G ++E+RETP ++ RFIE+YDVRDA ALK +N EI G
Sbjct: 274 IFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGG 333
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 334 KCIKLELSRPGG 345
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S L +F+ FG ++ L + I +YD+R A A++ +
Sbjct: 186 TLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQNTL 245
Query: 290 IYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 246 LRKRTLDIHFSIP 258
>gi|20197865|gb|AAM15289.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 803
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 214 LYTACKSRGFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLV 273
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FN+D+ VS+ L ++F A+G ++E+RETP ++ RFIE+YDVRDA ALK +N EI G
Sbjct: 274 IFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGG 333
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 334 KCIKLELSRPGG 345
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S L +F+ FG ++ L + I +YD+R A A++ +
Sbjct: 186 TLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQNTL 245
Query: 290 IYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 246 LRKRTLDIHFSIP 258
>gi|18406092|ref|NP_565990.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|75337307|sp|Q9SJG8.2|AML2_ARATH RecName: Full=Protein MEI2-like 2; Short=AML2; AltName:
Full=MEI2-like protein 2
gi|13605835|gb|AAK32903.1|AF367316_1 At2g42890/F7D19.11 [Arabidopsis thaliana]
gi|20197963|gb|AAD21720.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|23506039|gb|AAN28879.1| At2g42890/F7D19.11 [Arabidopsis thaliana]
gi|330255088|gb|AEC10182.1| MEI2-like 2 protein [Arabidopsis thaliana]
Length = 843
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 227 LYTACKSRGFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLV 286
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FN+D+ VS+ L ++F A+G ++E+RETP ++ RFIE+YDVRDA ALK +N EI G
Sbjct: 287 IFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGG 346
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 347 KCIKLELSRPGG 358
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S L +F+ FG ++ L + I +YD+R A A++ +
Sbjct: 199 TLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQNTL 258
Query: 290 IYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 259 LRKRTLDIHFSIP 271
>gi|297824253|ref|XP_002880009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325848|gb|EFH56268.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 827
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 212 LYTACKSRGFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLV 271
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FN+D+ VS+ L ++F A+G ++E+RETP ++ RFIE+YDVRDA ALK +N EI G
Sbjct: 272 IFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGG 331
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 332 KCIKLELSRPGG 343
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S L +F+ FG ++ L + I +YD+R A A++ +
Sbjct: 184 TLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQNTL 243
Query: 290 IYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 244 LRKRTLDIHFSIP 256
>gi|47834693|gb|AAT39000.1| AML1 [Aegilops speltoides]
Length = 869
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNLD VS+ +++IF +G VKE+RETP KKH
Sbjct: 275 RKLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHH 334
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N EI GK + +E SRPGG
Sbjct: 335 KFIEFYDVRAAEAALRSLNKSEIAGKRIKLEPSRPGG 371
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ L KH+ F I ++D+R A A++ +
Sbjct: 212 TLFVRNINSNVEDSELRSLFEQFGDIRTLYTA--TKHRGFVMISYFDIRAARGAMRSLQN 269
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 270 KPLRRRKLDIHFSIP 284
>gi|167377220|ref|XP_001734320.1| RNA-binding protein [Entamoeba dispar SAW760]
gi|165904234|gb|EDR29534.1| RNA-binding protein, putative [Entamoeba dispar SAW760]
Length = 291
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 60/83 (72%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N G+IVVFNLD ++++ + +IF FG +K++R+TP KKH RFIEF+D R A KALK MN
Sbjct: 104 NHGSIVVFNLDETITNALIHQIFSQFGEIKDIRQTPNKKHHRFIEFFDSRSAEKALKTMN 163
Query: 287 GQEIYGKHVVIEFSRPGGHSKKF 309
E+ GK + IEFSRPGG F
Sbjct: 164 KTELNGKKLKIEFSRPGGRETGF 186
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFK 137
+ TL +S + +VS + LE FGE+ + ER +G V V +YD+R+A++A K
Sbjct: 23 SHTLFISNINSEVSSEAYYQLLESFGEIEAINFERKSQGFVIVTYYDIRNAKVAIK 78
>gi|227206268|dbj|BAH57189.1| AT4G18120 [Arabidopsis thaliana]
Length = 629
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 73/132 (55%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 65 LYTACKQRGFVMVSYNDIRASRAAMRALQGKLLKKRKLDIHFSIPKDNPSEKDVNQGTLV 124
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
VFNL VS+ L+ IF +G +KE+RETP K+H +F+EF+DVR A ALK +N EI G
Sbjct: 125 VFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALNRTEIAG 184
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 185 KRIKLEHSRPGG 196
>gi|334305801|sp|Q9SVV9.2|AML3_ARATH RecName: Full=Protein MEI2-like 3; Short=AML3; AltName:
Full=MEI2-like protein 3
Length = 759
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 30/274 (10%)
Query: 57 GGVG--YAQYPTHPQLGVPLPPPS----TGPTRTLVLSYVPGDVSETIVRRDLEVFGEVR 110
GG+G +HP +G LP +G L LS +P + + D ++FG
Sbjct: 57 GGIGNMLDDGDSHP-IGNMLPDDEEELFSGLMDDLNLSSLPATLDDL---EDYDLFGSGG 112
Query: 111 GVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHM-QLQQQSYGLKNPYS---SGLMLMNN 166
G+++E + F + A+ + Q++ Q S ++PY S + + N
Sbjct: 113 GLELETDPYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRTLFVRN 172
Query: 167 DNNN----------------NNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPV 210
N+N L T C V S + + + L+ R +
Sbjct: 173 INSNVEDSELQALFEQYGHIRTLYTACKQRGFVMVSYNDIRASRAAMRALQGKLLKKRKL 232
Query: 211 WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
F +P N NQGT+VVFNL VS+ L+ IF +G +KE+RETP K+H +F+
Sbjct: 233 DIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFV 292
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
EF+DVR A ALK +N EI GK + +E SRPGG
Sbjct: 293 EFFDVRSADAALKALNRTEIAGKRIKLEHSRPGG 326
>gi|290975121|ref|XP_002670292.1| predicted protein [Naegleria gruberi]
gi|284083849|gb|EFC37548.1| predicted protein [Naegleria gruberi]
Length = 778
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
Query: 204 LVAGRPVWAQFIVPTCNA-VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFG-PVKELRET 261
L+ R + + +P N + NQ T+VVFNLD +++ LK IF FG VKE+RET
Sbjct: 480 LIKKRKIDIHYSIPKENPPEKEQLNQETLVVFNLDPSITNEELKTIFTQFGGDVKEIRET 539
Query: 262 PLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF-FYANSSSCASS 320
P KK +FIEFYD RDA +ALK++N E+ GK + IE+SRPGG +F +++S S + +
Sbjct: 540 PNKKFHKFIEFYDTRDAERALKQLNKTELKGKKIKIEYSRPGGLRNRFPSFSDSDSGSPT 599
Query: 321 L 321
L
Sbjct: 600 L 600
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N+ S V L+ +F++FGP++++ + KH+ F I +YD+R A +A K +
Sbjct: 421 TLFVRNISSVVDDQELRILFESFGPIRQMYTSC--KHRGFVMITYYDIRHAKQAKKNLQS 478
Query: 288 QEIYGKHVVIEFSRP 302
+ I + + I +S P
Sbjct: 479 KLIKKRKIDIHYSIP 493
>gi|12323530|gb|AAG51742.1|AC068667_21 RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis
thaliana]
Length = 779
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD +S+ L IF A G +KE+RETP K+H
Sbjct: 222 RKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRHH 281
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYA-NSSSCASSLNYSTI 326
+F+EFYDVR A ALK +N EI GK + +E SRPGG + N L+Y +
Sbjct: 282 KFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYLPM 341
Query: 327 YQTRNSDCPPP--PLSADPPSYSP-RSFASQAPHF 358
+ ++ PP PL++ P SP +S S++P F
Sbjct: 342 IGSPMANSPPSNWPLNS-PVEGSPLQSVLSRSPVF 375
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ + E +G++R + G V + +YD+R A MA + ++
Sbjct: 156 PSRTLFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQ 215
Query: 141 EQ 142
+
Sbjct: 216 NK 217
>gi|110740425|dbj|BAF02107.1| putative RNA-binding protein MEI2 [Arabidopsis thaliana]
Length = 593
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD +S+ L IF A G +KE+RETP K+H
Sbjct: 25 RKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRHH 84
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYDVR A ALK +N EI GK + +E SRPGG
Sbjct: 85 KFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGG 121
>gi|30690712|ref|NP_174233.2| MEI2-like protein 5 [Arabidopsis thaliana]
gi|30690716|ref|NP_849727.1| MEI2-like protein 5 [Arabidopsis thaliana]
gi|75331078|sp|Q8VWF5.1|AML5_ARATH RecName: Full=Protein MEI2-like 5; Short=AML5; AltName:
Full=MEI2-like protein 5
gi|17065074|gb|AAL32691.1| RNA-binding protein MEI2, putative [Arabidopsis thaliana]
gi|17979281|gb|AAL49866.1| putative RNA-binding protein MEI2 [Arabidopsis thaliana]
gi|20259101|gb|AAM14266.1| putative RNA-binding protein MEI2 [Arabidopsis thaliana]
gi|332192961|gb|AEE31082.1| MEI2-like protein 5 [Arabidopsis thaliana]
gi|332192962|gb|AEE31083.1| MEI2-like protein 5 [Arabidopsis thaliana]
Length = 800
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD +S+ L IF A G +KE+RETP K+H
Sbjct: 232 RKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRHH 291
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYDVR A ALK +N EI GK + +E SRPGG
Sbjct: 292 KFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGG 328
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ + E +G++R + G V + +YD+R A MA + ++
Sbjct: 166 PSRTLFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQ 225
Query: 141 EQ 142
+
Sbjct: 226 NK 227
>gi|6650523|gb|AAF21885.1|AF101056_1 MEI2 [Arabidopsis thaliana]
Length = 833
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L+ R + F +P N NQGT+V+FN+D+ VS+ L ++F A+G ++E+RETP
Sbjct: 248 LLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVSNDELLQLFGAYGEIREIRETPN 307
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
++ RFIE+YDVRD ALK +N EI GK + +E SRPGG
Sbjct: 308 RRFHRFIEYYDVRDEETALKALNRSEIGGKCIKLELSRPGG 348
>gi|255540053|ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
gi|223550206|gb|EEF51693.1| RNA-binding protein, putative [Ricinus communis]
Length = 972
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+V+FNLDS VS+ L +IF +G +KE+RETP K+H
Sbjct: 337 RKLDIHYSIPKDNPSEKDINQGTLVIFNLDSSVSTEELHKIFGVYGEIKEIRETPHKRHH 396
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIE+YD+R A AL +N +I GK + +E SRPGG
Sbjct: 397 KFIEYYDIRSAEAALSALNRSDIAGKQIKLEPSRPGG 433
>gi|47834705|gb|AAT39006.1| AML1 [Solanum tuberosum]
Length = 843
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD VS+ L+++F +G +KE+RETP K+H
Sbjct: 244 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNDDLRKVFGPYGEIKEIRETPHKRHH 303
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIE+YDVR A AL+ +N I GK + +E SRPGG + +S +++ +
Sbjct: 304 KFIEYYDVRAAEAALRSLNKSAIAGKRIKLEPSRPGGARRNLVLQSSQEPEQDDSWTFRH 363
Query: 328 ----QTRNSDCPPPPLSADPPSYSPRSFASQAPHFRKKSPSNSFKGNPNNVNVTCSIEPS 383
NS P P + +P FR SP+ + NN++ SI S
Sbjct: 364 PLGSSIGNSSPGNWPQFGSPIEHGSTQSPGTSPGFRSLSPTIA-----NNLHGLASILHS 418
Query: 384 VASLSLANA 392
AS +L A
Sbjct: 419 RASNTLTVA 427
>gi|297851358|ref|XP_002893560.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339402|gb|EFH69819.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 799
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 62/97 (63%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD +S+ L IF G +KE+RETP K+H
Sbjct: 232 RKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGVHGEIKEIRETPHKRHH 291
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYDVR A ALK +N EI GK + +E SRPGG
Sbjct: 292 KFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGG 328
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ + E +G++R + G V + +YD+R A MA + ++
Sbjct: 166 PSRTLFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQ 225
Query: 141 EQ 142
+
Sbjct: 226 NK 227
>gi|357139327|ref|XP_003571234.1| PREDICTED: protein MEI2-like 5-like [Brachypodium distachyon]
Length = 945
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 62/97 (63%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V+FNL+ VS+ L IF FG V+E+RETP K H
Sbjct: 389 RKLDIHFSIPKENPSDKDMNQGTLVIFNLEPAVSNEELLRIFGEFGEVREIRETPQKLHH 448
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
RFIEFYDVR A AL+ +N +I GK V +E SRPGG
Sbjct: 449 RFIEFYDVRAAEAALRSLNKSDIAGKRVKLEPSRPGG 485
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V + +R E FG++R + G V + +YD+RHA A + ++
Sbjct: 323 PSRTLFVRNINSNVEDPELRLLFEPFGDIRSMYTATKHRGFVMISYYDIRHARNAMRTLQ 382
Query: 141 EQ 142
+
Sbjct: 383 NK 384
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V L+ +F+ FG ++ + KH+ F I +YD+R A A++ +
Sbjct: 326 TLFVRNINSNVEDPELRLLFEPFGDIRSMYTA--TKHRGFVMISYYDIRHARNAMRTLQN 383
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 384 KPLRRRKLDIHFSIP 398
>gi|240255987|ref|NP_193546.7| protein MEI2-like 3 [Arabidopsis thaliana]
gi|240255989|ref|NP_001119005.4| protein MEI2-like 3 [Arabidopsis thaliana]
gi|332658598|gb|AEE83998.1| protein MEI2-like 3 [Arabidopsis thaliana]
gi|332658599|gb|AEE83999.1| protein MEI2-like 3 [Arabidopsis thaliana]
Length = 730
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
F +P N NQGT+VVFNL VS+ L+ IF +G +KE+RETP K+H +F+EF
Sbjct: 206 HFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFVEF 265
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+DVR A ALK +N EI GK + +E SRPGG
Sbjct: 266 FDVRSADAALKALNRTEIAGKRIKLEHSRPGG 297
>gi|224066573|ref|XP_002302143.1| predicted protein [Populus trichocarpa]
gi|222843869|gb|EEE81416.1| predicted protein [Populus trichocarpa]
Length = 763
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 224 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRLIFGAYGEVKEIRETPHKRHH 283
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A AL+ +N +I GK + +E SRPGG + S S +
Sbjct: 284 KFIEFYDVRAAEAALRALNKSDIAGKRIKLEPSRPGGARRNMMQQISQELEQDEVRSFRH 343
Query: 328 QTRN--SDCPPPPLSADPPSYSPRSFASQAPHFRKKSPSNSFKGNPNNVNVTCSIEP 382
Q + + PP P ++P S++P SP N NN+ SI P
Sbjct: 344 QVGSPVGNSPPGAWLGSPVEHNPLHGFSKSPGLGTLSPVNG-----NNLPGLASILP 395
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ L KH+ F I +YD+RDA A++ +
Sbjct: 161 TLFVRNINSNVEDSELRSLFEQFGDIRTLYTAC--KHRGFVMISYYDIRDARTAMRALQN 218
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 219 KPLRRRKLDIHFSIP 233
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 54 VPFGGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQ 113
+P GVG+ P P P+RTL + + +V ++ +R E FG++R +
Sbjct: 131 IPANGVGHYPLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQFGDIRTLY 190
Query: 114 MERLMEGIVTVHFYDLRHAEMAFKEIREQ 142
G V + +YD+R A A + ++ +
Sbjct: 191 TACKHRGFVMISYYDIRDARTAMRALQNK 219
>gi|296086312|emb|CBI31753.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L++IF A+G VKE+RETP K+H
Sbjct: 257 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A AL+ +N +I GK + +E SRPGG + S S +
Sbjct: 317 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRH 376
Query: 328 QTRN--SDCPPPPLSA-DPPSYSPRSFASQAPHFRKKSPSNS 366
+ ++ PP +A P ++P S +P SP NS
Sbjct: 377 HVGSPVTNSPPGNWAAFSPVEHNPLQAYSHSPGLGNISPINS 418
>gi|224106828|ref|XP_002333627.1| predicted protein [Populus trichocarpa]
gi|222837850|gb|EEE76215.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLDS +S L +IF +G +KE+RE+P + H
Sbjct: 12 RKLDIHYSIPKDNPSEKDMNQGTLVVFNLDSSISIDELHQIFGVYGEIKEIRESPQRHHD 71
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIE+YD+RDA AL +N +I GK + +E S PGG
Sbjct: 72 KFIEYYDIRDADAALSALNRSDIAGKQIKVESSLPGG 108
>gi|328866867|gb|EGG15250.1| hypothetical protein DFA_10084 [Dictyostelium fasciculatum]
Length = 1149
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 5/95 (5%)
Query: 215 IVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYD 274
++ CN N+ GT+VVFNLD +++ L +IF G +KE+RETP K H +FIE+YD
Sbjct: 631 MLKDCN-----NDIGTLVVFNLDPSMTNQQLTQIFGVHGQIKEIRETPNKAHHKFIEYYD 685
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
R+AA+A+K +N E+ GK + I++SRPGG+ K
Sbjct: 686 TREAAEAIKHLNKAELAGKRLRIQYSRPGGNKKNL 720
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI--EFYDVRDAAKALKEMNG 287
T+ V N+ + + + +F +FGPVK + T KH+ FI ++YD+R A +L+ ++
Sbjct: 560 TLFVGNISASIDDESAMSLFSSFGPVKSIMGTC--KHRGFIIVDYYDIRHAMSSLRNLHN 617
Query: 288 QEIYGKHVVIEFS 300
E++ + + I ++
Sbjct: 618 TELHKRKLDIRYA 630
>gi|440302969|gb|ELP95275.1| hypothetical protein EIN_430810 [Entamoeba invadens IP1]
Length = 387
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGT+VVFNLD+ ++ T+K++F +G VKE+RETP K+H +F+EF+D+RDAAKA +N
Sbjct: 114 NQGTLVVFNLDASCTNETIKQLFLQYGDVKEIRETPNKRHHKFVEFFDLRDAAKAEAALN 173
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFF 310
E GK + +E SRPGG ++
Sbjct: 174 HAEFCGKRLKLEPSRPGGIRQRLL 197
>gi|67462637|ref|XP_647980.1| RNA-binding protein [Entamoeba histolytica HM-1:IMSS]
gi|56463802|gb|EAL42594.1| RNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 388
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 63/78 (80%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGTIVVFN++ ++++ LKE+F +G +KE+RETP KKH +FIE+YD+R+A KA++++N
Sbjct: 112 NQGTIVVFNIEYSITNTQLKEVFGKYGDIKEIRETPNKKHHKFIEYYDLRNAQKAIEKLN 171
Query: 287 GQEIYGKHVVIEFSRPGG 304
E+ G+ + IE SRPGG
Sbjct: 172 HFEMKGRKIKIEPSRPGG 189
>gi|449707809|gb|EMD47398.1| RNA-binding protein, putative [Entamoeba histolytica KU27]
Length = 331
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 63/78 (80%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGTIVVFN++ ++++ LKE+F +G +KE+RETP KKH +FIE+YD+R+A KA++++N
Sbjct: 112 NQGTIVVFNIEYSITNTQLKEVFGKYGDIKEIRETPNKKHHKFIEYYDLRNAQKAIEKLN 171
Query: 287 GQEIYGKHVVIEFSRPGG 304
E+ G+ + IE SRPGG
Sbjct: 172 HFEMKGRKIKIEPSRPGG 189
>gi|449530592|ref|XP_004172278.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 831
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 63/103 (61%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V FNLD + + L +IF +G VKE+RETP K+H
Sbjct: 240 RKLDIHFSIPKNNPSEKDINQGTLVAFNLDPSIPNEDLLQIFGVYGEVKEIRETPHKRHH 299
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIE+YDVR A ALK +N +I GK + +E SRPGG +
Sbjct: 300 KFIEYYDVRAAEAALKALNRSDIVGKRIKLEPSRPGGARRNLM 342
>gi|449433563|ref|XP_004134567.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 849
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V FNLD + + L +IF +G VKE+RETP K+H
Sbjct: 258 RKLDIHFSIPKNNPSEKDINQGTLVAFNLDPSIPNEDLLQIFGVYGEVKEIRETPHKRHH 317
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIE+YDVR A ALK +N +I GK + +E SRPGG
Sbjct: 318 KFIEYYDVRAAEAALKALNRSDIVGKRIKLEPSRPGG 354
>gi|359485142|ref|XP_002279792.2| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
Length = 842
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L++IF A+G VKE+RETP K+H
Sbjct: 251 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHH 310
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEFYDVR A AL+ +N +I GK + +E SRPGG + S S +
Sbjct: 311 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRH 370
Query: 328 QTRN--SDCPPPPLSA-DPPSYSPRSFASQAPHFRKKSPSNS 366
+ ++ PP +A P ++P S +P SP NS
Sbjct: 371 HVGSPVTNSPPGNWAAFSPVEHNPLQAYSHSPGLGNISPINS 412
>gi|302802087|ref|XP_002982799.1| hypothetical protein SELMODRAFT_117045 [Selaginella moellendorffii]
gi|300149389|gb|EFJ16044.1| hypothetical protein SELMODRAFT_117045 [Selaginella moellendorffii]
Length = 521
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 75/132 (56%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + S + L+ R + F +P N NQGT+V
Sbjct: 59 LYTACKHRGFVMISYYDIRSARTAMRVLQGRLLRRRKLDIHFSIPKDNPSDKDINQGTLV 118
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
VFNLD+ VS L++IF +G VKE+RETP KKH +FIEFYDVR A AL+ +N +I G
Sbjct: 119 VFNLDASVSGEDLRKIFGQYGEVKEIRETPHKKHHKFIEFYDVRAAEAALRALNRSDIAG 178
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 179 KRIKLEPSRPGG 190
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+E+F+ +G ++ L KH+ F I +YD+R A A++ + G
Sbjct: 31 TLFVRNINSNVEDSELRELFEIYGDIRTLYTAC--KHRGFVMISYYDIRSARTAMRVLQG 88
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 89 RLLRRRKLDIHFSIP 103
>gi|224075455|ref|XP_002304641.1| predicted protein [Populus trichocarpa]
gi|222842073|gb|EEE79620.1| predicted protein [Populus trichocarpa]
Length = 976
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+ VFNLDS VS+ L+ IF +G +KE+RETP + H
Sbjct: 342 RKLDIHYSIPKDNPSEKDFNQGTLAVFNLDSSVSNDDLRRIFGVYGEIKEIRETPHRNHH 401
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYDVR A AL +N +I GK + +E S PGG
Sbjct: 402 KFVEFYDVRAAEAALHALNKSDIAGKRIKLEASCPGG 438
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ IF+ +G ++ L KH+ F I +YD+R A A+K +
Sbjct: 279 TLFVRNINSNVEESELRAIFEQYGDIRTLYTAC--KHRGFVMISYYDIRAAKNAMKALQN 336
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 337 RPLRCRKLDIHYSIP 351
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V E+ +R E +G++R + G V + +YD+R A+ A K ++
Sbjct: 276 PSRTLFVRNINSNVEESELRAIFEQYGDIRTLYTACKHRGFVMISYYDIRAAKNAMKALQ 335
Query: 141 EQHMQLQQ 148
+ ++ ++
Sbjct: 336 NRPLRCRK 343
>gi|167384308|ref|XP_001736893.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900542|gb|EDR26847.1| hypothetical protein EDI_341780 [Entamoeba dispar SAW760]
Length = 388
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 63/78 (80%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGTIVVFN++ ++++ LK++F +G +KE+RETP KKH +FIE+YD+R+A KA++++N
Sbjct: 112 NQGTIVVFNIEYSITNTQLKDVFGRYGDIKEIRETPNKKHHKFIEYYDLRNAQKAIEKLN 171
Query: 287 GQEIYGKHVVIEFSRPGG 304
E+ G+ + IE SRPGG
Sbjct: 172 HFEMKGRKIKIEPSRPGG 189
>gi|440295496|gb|ELP88409.1| RNA-binding protein, putative [Entamoeba invadens IP1]
Length = 279
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
NQGT+VVFNLDS +++ + +F +G +KE+RETP K+H RFIEF+D R A KAL +
Sbjct: 100 TNQGTVVVFNLDSLLTTDDVYSLFSQYGEIKEIRETPNKRHHRFIEFFDTRAAQKALTTL 159
Query: 286 NGQEIYGKHVVIEFSRPGG 304
+ E GK + IEFSRPGG
Sbjct: 160 DKTEFNGKVLKIEFSRPGG 178
>gi|307135827|gb|ADN33699.1| RNA-binding protein [Cucumis melo subsp. melo]
Length = 968
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNL+S VS+ L++IF +G +KE+RE P + H
Sbjct: 313 RKLDIHYSIPKDNPSEKDINQGTLVVFNLESSVSNEELRQIFGVYGEIKEIREAPHRSHH 372
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYD+R A AL +N +I GK + +E SRPGG
Sbjct: 373 KFIEFYDIRAAEAALCALNLSDIAGKQIKLEPSRPGG 409
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S LK +F+ +G ++ L KH+ F I +YD+R A A+K +
Sbjct: 250 TLFVRNINSNVEDSELKVLFEQYGDIRTLYTAC--KHRGFVMISYYDIRAARNAMKALQN 307
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 308 KPLRRRKLDIHYSIP 322
>gi|167381075|ref|XP_001735561.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902385|gb|EDR28233.1| hypothetical protein EDI_132160 [Entamoeba dispar SAW760]
Length = 388
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 63/78 (80%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGTIVVFN++ ++++ LK++F +G +KE+RETP KKH +FIE+YD+R+A KA++++N
Sbjct: 112 NQGTIVVFNIEYSITNTQLKDVFGRYGDIKEIRETPNKKHHKFIEYYDLRNAQKAIEKLN 171
Query: 287 GQEIYGKHVVIEFSRPGG 304
E+ G+ + IE SRPGG
Sbjct: 172 HFEMKGRKIKIEPSRPGG 189
>gi|449445596|ref|XP_004140558.1| PREDICTED: LOW QUALITY PROTEIN: protein MEI2-like 4-like [Cucumis
sativus]
Length = 962
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNL+S VS+ L++IF +G +KE+RE P + H
Sbjct: 307 RKLDIHYSIPKDNPSEKDINQGTLVVFNLESSVSNEELRQIFGVYGEIKEIREAPHRSHH 366
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYD+R A AL +N +I GK + +E SRPGG
Sbjct: 367 KFIEFYDIRAAEAALCALNLSDIAGKQIKLEPSRPGG 403
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ +G ++ L KH+ F I +YD+R A A+K +
Sbjct: 244 TLFVRNINSNVEDSELEALFEQYGDIRTLYTAC--KHRGFVMISYYDIRAARNAMKALQN 301
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 302 KPLRRRKLDIHYSIP 316
>gi|449481207|ref|XP_004156114.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 846
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 255 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFGAYGEVKEIRETPHKRHH 314
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 315 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLM 357
>gi|449487385|ref|XP_004157600.1| PREDICTED: LOW QUALITY PROTEIN: protein MEI2-like 4-like [Cucumis
sativus]
Length = 968
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNL+S VS+ L++IF +G +KE+RE P + H
Sbjct: 313 RKLDIHYSIPKDNPSEKDINQGTLVVFNLESSVSNEELRQIFGVYGEIKEIREAPHRSHH 372
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYD+R A AL +N +I GK + +E SRPGG
Sbjct: 373 KFIEFYDIRAAEAALCALNLSDIAGKQIKLEPSRPGG 409
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ +G ++ L KH+ F I +YD+R A A+K +
Sbjct: 250 TLFVRNINSNVEDSELEALFEQYGDIRTLYTAC--KHRGFVMISYYDIRAARNAMKALQN 307
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 308 KPLRRRKLDIHYSIP 322
>gi|449444985|ref|XP_004140254.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 846
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 255 RKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRRIFGAYGEVKEIRETPHKRHH 314
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 315 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLM 357
>gi|167385760|ref|XP_001737473.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899678|gb|EDR26221.1| hypothetical protein EDI_100550 [Entamoeba dispar SAW760]
Length = 290
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 63/78 (80%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGTIVVFN++ ++++ LK++F +G +KE+RETP KKH +FIE+YD+R+A KA++++N
Sbjct: 101 NQGTIVVFNIEYSITNTQLKDVFGRYGDIKEIRETPNKKHHKFIEYYDLRNAQKAIEKLN 160
Query: 287 GQEIYGKHVVIEFSRPGG 304
E+ G+ + IE SRPGG
Sbjct: 161 HFEMKGRKIKIEPSRPGG 178
>gi|224082554|ref|XP_002306739.1| predicted protein [Populus trichocarpa]
gi|222856188|gb|EEE93735.1| predicted protein [Populus trichocarpa]
Length = 741
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ VS+ L+ IF A+G VKE+RETP K+H
Sbjct: 144 RKLDIHFSIPKDNPSEKDVNQGTLVVFNLDASVSNDDLRLIFGAYGEVKEIRETPHKRHH 203
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N +I GK + +E SRPGG
Sbjct: 204 KFIEFYDVRAAEAALRALNKSDIAGKRIKLEPSRPGG 240
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ +G ++ L KH+ F I +YD+RDA A++ +
Sbjct: 81 TLFVRNINSNVEDSELRSLFEQYGDIRTLYTAC--KHRGFVMISYYDIRDARTAMRALQN 138
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I FS P
Sbjct: 139 KPLRRRKLDIHFSIP 153
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 54 VPFGGVGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQ 113
+P GVG+ P P P+RTL + + +V ++ +R E +G++R +
Sbjct: 51 IPANGVGHYALPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLY 110
Query: 114 MERLMEGIVTVHFYDLRHAEMAFKEIREQ 142
G V + +YD+R A A + ++ +
Sbjct: 111 TACKHRGFVMISYYDIRDARTAMRALQNK 139
>gi|224122206|ref|XP_002318777.1| predicted protein [Populus trichocarpa]
gi|222859450|gb|EEE96997.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 94.4 bits (233), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
+ +P N NQGT+VVFNLDS +S L +IF +G +KE+RE+P + H +FIE+
Sbjct: 30 HYSIPKDNPSEKDMNQGTLVVFNLDSSISIDELHQIFGVYGEIKEIRESPQRHHDKFIEY 89
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
YD+RDA AL +N +I GK + +E S PGG
Sbjct: 90 YDIRDADAALSALNRSDIAGKQIKVESSLPGG 121
>gi|302774913|ref|XP_002970873.1| hypothetical protein SELMODRAFT_441278 [Selaginella moellendorffii]
gi|300161584|gb|EFJ28199.1| hypothetical protein SELMODRAFT_441278 [Selaginella moellendorffii]
Length = 951
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ V++ L+ IF +G +KE+RETP KKH
Sbjct: 374 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDASVTNDDLRHIFGVYGEIKEIRETPHKKHH 433
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 434 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRSLM 476
>gi|255543210|ref|XP_002512668.1| RNA-binding protein, putative [Ricinus communis]
gi|223548629|gb|EEF50120.1| RNA-binding protein, putative [Ricinus communis]
Length = 443
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+V FNLD+ +S+ L +IF G +KE+RE P +
Sbjct: 292 RKLDIHFSIPKDNPSEKDTNQGTLVAFNLDASISNDELHQIFGVHGEIKEIREIPNRSQH 351
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEFYDVR A AL+ +N I GK + +E SRPGG
Sbjct: 352 KFIEFYDVRAAENALRALNRSHIAGKQIKLEPSRPGG 388
>gi|302772378|ref|XP_002969607.1| hypothetical protein SELMODRAFT_91923 [Selaginella moellendorffii]
gi|300163083|gb|EFJ29695.1| hypothetical protein SELMODRAFT_91923 [Selaginella moellendorffii]
Length = 501
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 188 MIMNSYAPVLPPPA--RGL----VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVS 241
+M SY + + RGL + R + F +P N NQGT+VVFNLD+ V+
Sbjct: 69 FVMISYYDIRAARSAMRGLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDTSVT 128
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L++IF +G +KE+RETP KKH +FIEFYDVR A AL+ +N +I GK + +E SR
Sbjct: 129 NDDLRQIFGVYGEIKEIRETPHKKHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSR 188
Query: 302 PGG 304
PGG
Sbjct: 189 PGG 191
>gi|302772374|ref|XP_002969605.1| hypothetical protein SELMODRAFT_440826 [Selaginella moellendorffii]
gi|300163081|gb|EFJ29693.1| hypothetical protein SELMODRAFT_440826 [Selaginella moellendorffii]
Length = 829
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD+ V++ L+ IF +G +KE+RETP KKH
Sbjct: 252 RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDASVTNDDLRHIFGVYGEIKEIRETPHKKHH 311
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFF 310
+FIEFYDVR A AL+ +N +I GK + +E SRPGG +
Sbjct: 312 KFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRSLM 354
>gi|302774915|ref|XP_002970874.1| hypothetical protein SELMODRAFT_441279 [Selaginella moellendorffii]
gi|300161585|gb|EFJ28200.1| hypothetical protein SELMODRAFT_441279 [Selaginella moellendorffii]
Length = 1059
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 188 MIMNSYAPVLPPPA--RGL----VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVS 241
+M SY + + RGL + R + F +P N NQGT+VVFNLD+ V+
Sbjct: 199 FVMISYYDIRAARSAMRGLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDTSVT 258
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L++IF +G +KE+RETP KKH +FIEFYDVR A AL+ +N +I GK + +E SR
Sbjct: 259 NDDLRQIFGVYGEIKEIRETPHKKHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSR 318
Query: 302 PGG 304
PGG
Sbjct: 319 PGG 321
>gi|297734509|emb|CBI15756.3| unnamed protein product [Vitis vinifera]
Length = 998
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLDS VS+ L++IF +G +KE+RETP K+H
Sbjct: 344 RKLDIHYSIPKDNPSEKDINQGTLVVFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHH 403
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+FIEF+DVR A AL+ +N +I GK + +E SRPGG S C L S +
Sbjct: 404 KFIEFFDVRAAEAALRALNRSDIAGKRIKLEPSRPGG---------SRRCLMQLCSSELE 454
Query: 328 QTRNSDCPPP 337
Q + C P
Sbjct: 455 QDESILCQSP 464
>gi|281204301|gb|EFA78497.1| RNA binding protein [Polysphondylium pallidum PN500]
Length = 1021
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
GT+VVFNL+ V++ L +IF A+G +KE+RETP K + +FIE+YD+R+A +A+K +N
Sbjct: 601 GTLVVFNLEPSVTNQVLHKIFGAYGQIKEIRETPNKSYHKFIEYYDIREANEAIKNLNKI 660
Query: 289 EIYGKHVVIEFSRPGGHSKK 308
E+ GK + I+ SRPGG+ K+
Sbjct: 661 EVAGKRLRIQHSRPGGNKKQ 680
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++ + S L +F +G VK L + +E+YD+R + A++ +NG E
Sbjct: 521 TLFVANINPQLDDSVLTSLFSKYGAVKSLSGKSKHRGYIIVEYYDIRHSINAMRNLNGSE 580
Query: 290 IYGKHVVIEFS 300
++ K + I +S
Sbjct: 581 VHKKKLDISYS 591
>gi|5816998|emb|CAB53653.1| putative protein [Arabidopsis thaliana]
gi|7268605|emb|CAB78814.1| putative protein [Arabidopsis thaliana]
Length = 715
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE-LRETPLKKHQRFIEFYDVRDAAKALKEM 285
NQGT+VVFNL VS+ L+ IF +G +KE +RETP K+H +F+EF+DVR A ALK +
Sbjct: 149 NQGTLVVFNLAPSVSNRDLENIFGVYGEIKEQIRETPNKRHHKFVEFFDVRSADAALKAL 208
Query: 286 NGQEIYGKHVVIEFSRPGG 304
N EI GK + +E SRPGG
Sbjct: 209 NRTEIAGKRIKLEHSRPGG 227
>gi|359491581|ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
Length = 991
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLDS VS+ L++IF +G +KE+RETP K+H
Sbjct: 338 RKLDIHYSIPKDNPSEKDINQGTLVVFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHH 397
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+FIEF+DVR A AL+ +N +I GK + +E SRPGG
Sbjct: 398 KFIEFFDVRAAEAALRALNRSDIAGKRIKLEPSRPGG 434
>gi|224134156|ref|XP_002321750.1| predicted protein [Populus trichocarpa]
gi|222868746|gb|EEF05877.1| predicted protein [Populus trichocarpa]
Length = 919
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE-LRETPLKKHQRFIE 271
+ +P N NQGT+VVFNLDS V+ L++IF +G +KE +RE+P K H +F+E
Sbjct: 289 HYSIPKDNPSEKDMNQGTLVVFNLDSSVTIDELRQIFGVYGEIKEVIRESPHKHHHKFVE 348
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+YD+R A AL +N ++ GK + IE S PGG
Sbjct: 349 YYDIRAAEAALSALNRSDVAGKQIKIESSHPGG 381
>gi|123416562|ref|XP_001304919.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886404|gb|EAX91989.1| hypothetical protein TVAG_001580 [Trichomonas vaginalis G3]
Length = 257
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N GTIV+F+LD ++++ L+ IF +FG ++++R TP K QRFIE++D R A ALK MN
Sbjct: 169 NNGTIVLFHLDPSITNTQLESIFCSFGEIRQIRGTPSKPSQRFIEYWDTRCAQTALKTMN 228
Query: 287 GQEIYGKHVVIEFSRPGGHSKKF 309
G+ + G + IEFS PGG K F
Sbjct: 229 GKMLLGTKISIEFSIPGGLRKNF 251
>gi|449704423|gb|EMD44667.1| RNA -binding motif-containing protein, putative, partial [Entamoeba
histolytica KU27]
Length = 340
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+ +G N GT+V+FN+D TLK IF +G +KE+RETP +K+ +FIE++D R + A
Sbjct: 97 INEGPNHGTLVIFNIDKQTDDETLKTIFSKYGEIKEIRETPSRKYHKFIEYFDSRSSDVA 156
Query: 282 LKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
LKE+N EI G+ + IE S+P SK F C S+L
Sbjct: 157 LKELNDIEINGRKIKIEISKPNI-SKLIFL----QCVSNL 191
>gi|183231186|ref|XP_655505.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802588|gb|EAL50153.2| hypothetical protein EHI_130940 [Entamoeba histolytica HM-1:IMSS]
Length = 342
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+ +G N GT+V+FN+D TLK IF +G +KE+RETP +K+ +FIE++D R + A
Sbjct: 97 INEGPNHGTLVIFNIDKQTDDETLKTIFSKYGEIKEIRETPSRKYHKFIEYFDSRSSDVA 156
Query: 282 LKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
LKE+N EI G+ + IE S+P SK F C S+L
Sbjct: 157 LKELNDIEINGRKIKIEISKPNI-SKLIFL----QCVSNL 191
>gi|183232527|ref|XP_001913733.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169801988|gb|EDS89491.1| hypothetical protein EHI_136220 [Entamoeba histolytica HM-1:IMSS]
Length = 391
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+ +G N GT+V+FN+D TLK IF +G +KE+RETP +K+ +FIE++D R + A
Sbjct: 147 INEGPNHGTLVIFNIDKQTDDETLKTIFSKYGEIKEIRETPSRKYHKFIEYFDSRSSDVA 206
Query: 282 LKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
LKE+N EI G+ + IE S+P SK F C S+L
Sbjct: 207 LKELNDIEINGRKIKIEISKP-NISKLIFL----QCVSNL 241
>gi|350537385|ref|NP_001234547.1| AML1 [Solanum lycopersicum]
gi|47834703|gb|AAT39005.1| AML1 [Solanum lycopersicum]
Length = 971
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT++VFNLDS VS+ L++IF +G +KE+RET + H
Sbjct: 337 RKLDIHFSIPKDNPSEKNANQGTLLVFNLDSSVSNDELRQIFGVYGEIKEIRETQHRSHH 396
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
++IEFYDVR A AL+ +N ++ GK ++IE PGG
Sbjct: 397 KYIEFYDVRAAEAALRALNRSDVAGKQIMIEAIHPGG 433
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ +G ++ L KH+ F I +YD+R + A+K +
Sbjct: 274 TLFVRNVNSSVEDSELQTLFEQYGDIRTLYTAC--KHRGFVMISYYDIRASQNAMKALQN 331
Query: 288 QEIYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 332 NPLRRRKLDIHFSIP 346
>gi|357149210|ref|XP_003575037.1| PREDICTED: protein MEI2-like 4-like [Brachypodium distachyon]
Length = 987
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFN+D V++ L+ IF +G +KE+R+T K H
Sbjct: 341 RKLDIHYSIPKDNPSEKDVNQGTLVVFNVDPSVTNDDLRRIFGGYGEIKEIRDTTQKGHH 400
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+ IEFYD+R A AL+ +N +I GK + +E S GG
Sbjct: 401 KIIEFYDIRGAESALRALNRNDIAGKKIKLESSHLGG 437
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S LK IF+ +G ++ L KH+ F I +YD+R A A++ +
Sbjct: 278 TLFVRNINSNVEDSELKLIFEHYGDIRTLYTAC--KHRGFVMISYYDIRSARNAMRALQN 335
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 336 KPLRRRKLDIHYSIP 350
>gi|224053563|ref|XP_002297874.1| predicted protein [Populus trichocarpa]
gi|222845132|gb|EEE82679.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGT+VV NLDS VS+ L++IF +G +KE+RETP + H + +EFYDVR A AL MN
Sbjct: 9 NQGTLVVSNLDSSVSNDELRQIFGVYGEIKEIRETPNRNHHKLVEFYDVRAAEAALCAMN 68
Query: 287 GQEIYGKHVVIEFSRPGG 304
+I GK + +E S P G
Sbjct: 69 KSDIAGKRIKLEASHPRG 86
>gi|357488865|ref|XP_003614720.1| Poly(U)-binding-splicing factor PUF60 [Medicago truncatula]
gi|355516055|gb|AES97678.1| Poly(U)-binding-splicing factor PUF60 [Medicago truncatula]
Length = 141
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
+ GR + F P N NQGT VVFNLD VS+ L +I A+G VKE+RE+P K
Sbjct: 49 LGGRNLDIHFSNPKDNPSQKDINQGTFVVFNLDLSVSNDDLHQICGAYGEVKEIRESPNK 108
Query: 265 KHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
+ +FIEFYDVR A A+KE+N +I GK +
Sbjct: 109 RDHKFIEFYDVRAADAAVKELNQSDIAGKRI 139
>gi|407042732|gb|EKE41504.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein,
partial [Entamoeba nuttalli P19]
Length = 337
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N GT+V+FN+D TLK IF +G +KE+RETP +K+ +FIE++D R + ALKE+N
Sbjct: 118 NHGTLVIFNIDKQTDDETLKTIFSKYGEIKEIRETPSRKYHKFIEYFDSRSSDIALKELN 177
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
EI G+ + IE S+P SK F C S+L
Sbjct: 178 DIEINGRKIKIETSKPNI-SKLIFL----QCVSNL 207
>gi|123470169|ref|XP_001318292.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901047|gb|EAY06069.1| hypothetical protein TVAG_245010 [Trichomonas vaginalis G3]
Length = 256
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 60/225 (26%)
Query: 83 RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQ 142
RTL +S +E+ + V+ V M ++ EG TV +YD+R+A
Sbjct: 82 RTLQVSNANPTTTESEIMAVFNTHRGVKQVDMSKISEGQFTVEYYDIRNA---------- 131
Query: 143 HMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPAR 202
+S +L+N +Q+ +++ + + PV+ P +
Sbjct: 132 ---------------TSSKLLLNG-------------SQLKGKTITVSFAPLPVILDPKK 163
Query: 203 GLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETP 262
N GTIV+F+L +G++ + IF FG ++++R TP
Sbjct: 164 P----------------------PNNGTIVIFHLPAGITDDQIVTIFGQFGEIRQIRGTP 201
Query: 263 LKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSK 307
K QRF+E+YD R A AL M+G+ + G V IEFS PGG +
Sbjct: 202 TKTQQRFVEYYDTRHAEAALLSMSGKYVMGTRVSIEFSLPGGFRR 246
>gi|147775314|emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]
Length = 932
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLD V++ L +IF +G +KE+RETP + H
Sbjct: 288 RKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKEIRETPHRSHH 347
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYD+R A AL+ +N +I GK + +E SRPGG
Sbjct: 348 KFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGG 384
>gi|359473863|ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
Length = 965
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLD V++ L +IF +G +KE+RETP + H
Sbjct: 314 RKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKEIRETPHRSHH 373
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYD+R A AL+ +N +I GK + +E SRPGG
Sbjct: 374 KFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGG 410
>gi|296085525|emb|CBI29257.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+VVFNLD V++ L +IF +G +KE+RETP + H
Sbjct: 335 RKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKEIRETPHRSHH 394
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYD+R A AL+ +N +I GK + +E SRPGG
Sbjct: 395 KFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGG 431
>gi|356498044|ref|XP_003517864.1| PREDICTED: LOW QUALITY PROTEIN: protein MEI2-like 5-like [Glycine
max]
Length = 206
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIF-QAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
NQGT+V FNLD +S+ +L +IF A+G VKE +ETP KK +FIEFYDV+ A ALK++
Sbjct: 77 NQGTLVAFNLDPSISNDSLHQIFVWAYGEVKENKETPHKKPHKFIEFYDVKAAEVALKDL 136
Query: 286 NGQEIYGKHVVIEFSRPG 303
N +I G+ + +E SRPG
Sbjct: 137 NLMDIVGQRIKVEPSRPG 154
>gi|167395290|ref|XP_001741311.1| RNA binding motif protein [Entamoeba dispar SAW760]
gi|165894208|gb|EDR22270.1| RNA binding motif protein, putative [Entamoeba dispar SAW760]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 207 GRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKH 266
G + F +P + +G N GT+V+FN++ TLK +F +G +KE+RETP +K+
Sbjct: 100 GHQLHIVFGIPI--DINEGPNHGTLVIFNINKQTDDETLKTLFSKYGEIKEIRETPSRKY 157
Query: 267 QRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+FIE++D R + ALKE+N EI G+ + IE S+P SK F C S+L
Sbjct: 158 HKFIEYFDSRSSDVALKELNDIEINGRKIKIETSKPNI-SKLIFL----QCVSNL 207
>gi|357490369|ref|XP_003615472.1| Protein terminal ear1 [Medicago truncatula]
gi|355516807|gb|AES98430.1| Protein terminal ear1 [Medicago truncatula]
Length = 407
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
+ R + F P N NQGT+VVFNLD VS+ L +I A+G VKE+RETP K
Sbjct: 192 LGARNLDFHFSNPKDNPSQKDINQGTLVVFNLDLSVSNDDLHQICGAYGEVKEIRETPNK 251
Query: 265 KHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
+ +FIEFYDVR A ALK +N +I GK
Sbjct: 252 RDHKFIEFYDVRAADAALKALNQSDISGK 280
>gi|123498803|ref|XP_001327478.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121910408|gb|EAY15255.1| hypothetical protein TVAG_393980 [Trichomonas vaginalis G3]
Length = 260
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N GTIV+F+L +G++ + IF FG ++++R TP K QRF+E++D R A AL M+
Sbjct: 172 NNGTIVIFHLPAGITDDQIITIFGQFGEIRQIRGTPTKTQQRFVEYFDTRHAEAALLSMS 231
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G+ + G V IEFS PGG +
Sbjct: 232 GKYVMGARVSIEFSLPGGFRR 252
>gi|123484288|ref|XP_001324240.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907119|gb|EAY12017.1| hypothetical protein TVAG_272000 [Trichomonas vaginalis G3]
Length = 245
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 61/220 (27%)
Query: 83 RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQ 142
R+++++ V + +E +R + + M + EG VT+ +YDLR + A K +
Sbjct: 72 RSILVTNVHPETTEEEIRTMFSSGDSLYNIDMSNIKEGKVTLDYYDLRQSFRAKKLL--- 128
Query: 143 HMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPAR 202
N N+ G +I YAP++
Sbjct: 129 ---------------------------NGNVLHGN----------VITVDYAPIV----- 146
Query: 203 GLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETP 262
+ P N GTI +F++ + + ++ IFQ +G ++E+R TP
Sbjct: 147 ---------------VDKSDPKTQNHGTIAIFHVKTA-TDDHIRAIFQTYGEIREIRSTP 190
Query: 263 LKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+Q+F+EF+D+R AAKALK NG+ I G V IEFS P
Sbjct: 191 TNPNQKFVEFFDIRSAAKALKAKNGKYIMGTRVKIEFSAP 230
>gi|357163167|ref|XP_003579645.1| PREDICTED: protein MEI2-like 4-like [Brachypodium distachyon]
Length = 957
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
+ VP N + NNQGT+ VFNLD V++ L+ IF +G +KE+ ET + H ++IEF
Sbjct: 306 HYSVPKENTLEKDNNQGTLAVFNLDPSVTNDDLRHIFGGYGKIKEIHETSQQGHHKYIEF 365
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVI 297
YDVR A AL +N +I GK + +
Sbjct: 366 YDVRAAEAALYVLNRSDIAGKTIKL 390
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 30/148 (20%)
Query: 157 YSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIV 216
Y+ G M + D+NNN L+ +NS A G+++G + +
Sbjct: 191 YTGGGMELETDDNNN--------------KLLKLNSIASNGQTGLNGILSGENPYGE--- 233
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYD 274
+ T+ + N+D V S L+ +FQ +G ++ L KH F + +YD
Sbjct: 234 ---------HPSRTLFIRNIDGIVEDSELELLFQKYGEIQTLYTAC--KHHGFVMVSYYD 282
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+R A A+K + + + I +S P
Sbjct: 283 IRSAETAMKALQSKPFRNWKLDIHYSVP 310
>gi|242061760|ref|XP_002452169.1| hypothetical protein SORBIDRAFT_04g021130 [Sorghum bicolor]
gi|241932000|gb|EES05145.1| hypothetical protein SORBIDRAFT_04g021130 [Sorghum bicolor]
Length = 997
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 172 NLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTI 231
NL T C V S + S + + R + + +P N NQG +
Sbjct: 297 NLYTACKHRGFVMISYYDIRSAWNAMRALQNKPLRRRKLDIHYSIPKDNPSEKDINQGML 356
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIY 291
VVFN+D V+++ + +IF +G +KE+R+ P K H + IEFYDVR A A++ +N ++
Sbjct: 357 VVFNVDPSVTNNDIHQIFSDYGEIKEIRDAPQKGHHKIIEFYDVRAAESAVRALNRSDLA 416
Query: 292 GKHVVIEFSR 301
GK + +E R
Sbjct: 417 GKKIKLETGR 426
>gi|123253386|ref|XP_001289047.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121859393|gb|EAX76117.1| hypothetical protein TVAG_207000 [Trichomonas vaginalis G3]
Length = 259
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N GTIVVF++ V+ + IF +G ++++R TP K Q+FIEF+DVR A AL +M
Sbjct: 161 NNGTIVVFHIPEQVTEQMIFSIFSKYGEIRQIRGTPSKGFQKFIEFWDVRAAQDALVQMT 220
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANS--SSCASSLNY 323
G+ + G + IEFS PGG K N+ S +S NY
Sbjct: 221 GKFLMGSRITIEFSLPGGFRKHSVMENNTYSMKKASKNY 259
>gi|123399703|ref|XP_001301526.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121882717|gb|EAX88596.1| hypothetical protein TVAG_467070 [Trichomonas vaginalis G3]
Length = 321
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N GTIVVF++ V+ + IF +G ++++R TP K Q+FIEF+DVR A AL +M
Sbjct: 223 NNGTIVVFHIPEQVTEQMIFSIFSKYGEIRQIRGTPSKGFQKFIEFWDVRAAQDALVQMT 282
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G+ + G + IEFS PGG K
Sbjct: 283 GKFLMGSRITIEFSLPGGFRK 303
>gi|302797172|ref|XP_002980347.1| hypothetical protein SELMODRAFT_444436 [Selaginella moellendorffii]
gi|300151963|gb|EFJ18607.1| hypothetical protein SELMODRAFT_444436 [Selaginella moellendorffii]
Length = 762
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQ-----FIVPTCNAVPDGNN 227
L TGC E L++++ Y A + R +W Q F+ P ++ P +
Sbjct: 232 LYTGCK-----PEGLILVSYYDLRGAKRAIRALQSRVLWGQKLEMHFLFPK-DSHPYDTS 285
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
G + VFN+D VS+ LKE+F +G +KE+ ETPLK RFIEFYD R A AL+ +N
Sbjct: 286 LGMVAVFNVDPAVSNDDLKELFGVYGDIKEVHETPLKHRHRFIEFYDSRAACAALRVLNK 345
Query: 288 QEIYGKHVVIE 298
+++ + ++
Sbjct: 346 RDLLARRTRLD 356
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
TI V N+DS VS L+ +F+ FG ++ L + + +YD+R A +A++ + +
Sbjct: 204 TIFVRNIDSKVSDDELRAVFERFGDIRTLYTGCKPEGLILVSYYDLRGAKRAIRALQSRV 263
Query: 290 IYGKHVVIEFSRP 302
++G+ + + F P
Sbjct: 264 LWGQKLEMHFLFP 276
>gi|302758644|ref|XP_002962745.1| hypothetical protein SELMODRAFT_438348 [Selaginella moellendorffii]
gi|300169606|gb|EFJ36208.1| hypothetical protein SELMODRAFT_438348 [Selaginella moellendorffii]
Length = 760
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQ-----FIVPTCNAVPDGNN 227
L TGC E L++++ Y A + R +W Q F+ P ++ P +
Sbjct: 230 LYTGCK-----PEGLILVSYYDLRGAKRAIRALQSRVLWGQKLEMHFLFPK-DSHPYDTS 283
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
G + VFN+D VS+ LKE+F +G +KE+ ETPLK RFIEFYD R A AL+ +N
Sbjct: 284 LGMVAVFNVDPAVSNDDLKELFGVYGDIKEVHETPLKHRHRFIEFYDSRAACAALRVLNK 343
Query: 288 QEIYGKHVVIE 298
+++ + ++
Sbjct: 344 RDLLARRTRLD 354
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
TI V N+DS VS L+ +F+ FG ++ L + + +YD+R A +A++ + +
Sbjct: 202 TIFVRNIDSKVSDDELRAVFERFGDIRTLYTGCKPEGLILVSYYDLRGAKRAIRALQSRV 261
Query: 290 IYGKHVVIEFSRP 302
++G+ + + F P
Sbjct: 262 LWGQKLEMHFLFP 274
>gi|19172018|gb|AAL85701.1|AF474982_5 Mei2-like protein [Hordeum vulgare subsp. vulgare]
Length = 961
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
+ +P N + + NNQGT+ V NLD V++ L+ IF +G +K + ET K + + +EF
Sbjct: 303 HYSIPKENLLENDNNQGTLAVINLDQSVTNDDLRHIFGGYGEIKAIHETTQKGYHKSVEF 362
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
+D+R A AL +N +EI GK + +E PG
Sbjct: 363 FDIRAAEAALYALNMREIAGKKIRLERCCPG 393
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 69 QLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYD 128
Q G+ P P+RTL + + +V +T ++ E +G+++ + G+V + +YD
Sbjct: 220 QTGLNGLPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLYTAYKHHGLVIISYYD 279
Query: 129 LRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESL- 187
+R AE A K ++ + + + P + L+ NDNN LA D V + L
Sbjct: 280 IRSAERAMKALQSKPFRQWKLEIHYSIPKEN---LLENDNNQGTLAVINLDQSVTNDDLR 336
Query: 188 MIMNSYAPV 196
I Y +
Sbjct: 337 HIFGGYGEI 345
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 220 NAVPDGNN-QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEFYDVRD 277
N +P G N T+ + N+++ V + LK +F+ +G ++ L T K H I +YD+R
Sbjct: 224 NGLPYGENPSRTLFIRNINANVEDTELKLLFEQYGDIQTLY-TAYKHHGLVIISYYDIRS 282
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRP 302
A +A+K + + + I +S P
Sbjct: 283 AERAMKALQSKPFRQWKLEIHYSIP 307
>gi|297721251|ref|NP_001172988.1| Os02g0517531 [Oryza sativa Japonica Group]
gi|75322250|sp|Q64M78.1|OML4_ORYSJ RecName: Full=Protein MEI2-like 4; Short=OML4; AltName:
Full=MEI2-like protein 4
gi|52076187|dbj|BAD46727.1| putative AML1 [Oryza sativa Japonica Group]
gi|88193639|dbj|BAE79766.1| MEI2-like RNA binding protein [Oryza sativa Japonica Group]
gi|215768165|dbj|BAH00394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190846|gb|EEC73273.1| hypothetical protein OsI_07412 [Oryza sativa Indica Group]
gi|222622952|gb|EEE57084.1| hypothetical protein OsJ_06913 [Oryza sativa Japonica Group]
gi|255670944|dbj|BAH91717.1| Os02g0517531 [Oryza sativa Japonica Group]
Length = 1001
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGTIV+FN+D +++ L +IF +G +KE+R+TP K H
Sbjct: 339 RKLDIHYSIPKDNPSEKDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHH 398
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
+ IEFYDVR A AL+ +N +I GK + +E SR G + + +S C
Sbjct: 399 KIIEFYDVRAAEAALRALNRNDIAGKKIKLETSRLGAARRLSQHMSSELC 448
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S LK +F+ FG ++ L KH+ F I +YD+R A A E+
Sbjct: 276 TLFVRNINSNVEDSELKLLFEHFGDIRALYTAC--KHRGFVMISYYDIRSALNAKMELQN 333
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 334 KALRRRKLDIHYSIP 348
>gi|440291022|gb|ELP84321.1| RNA-binding protein, putative [Entamoeba invadens IP1]
Length = 381
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 207 GRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKH 266
G + F +P N VP +N T+VVFN + S LK F FG +KE+RE P KK
Sbjct: 101 GHQLEITFGIP--NDVPWTDNHATLVVFNAEYTFSVEDLKSAFGEFGEMKEIREAPSKKQ 158
Query: 267 QRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+FIE++D R A ALK+M+G I GK + +E S+P ++ K+ NS A L
Sbjct: 159 HKFIEYFDSRSAEAALKKMDGVCINGKKMKVENSKP--NNTKYMVINSIGKALQL 211
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V N+ S + ++EIFQ +G VK + + F+ +YD+R + A K +NG++
Sbjct: 39 VLYVKNIPSDFDRAEVEEIFQQYGDVKGVYWKTVSCGFIFVTYYDIRASRSAAKYINGRK 98
Query: 290 IYGKHVVIEFSRP 302
G + I F P
Sbjct: 99 YKGHQLEITFGIP 111
>gi|413922497|gb|AFW62429.1| hypothetical protein ZEAMMB73_657604, partial [Zea mays]
Length = 978
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 172 NLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTI 231
NL T C V S + S + + R + + +P N NQG +
Sbjct: 296 NLYTACKHRGFVMISYYDIRSSWNAMRALQNKPLRHRKLDIHYSIPKDNPSGKDINQGML 355
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIY 291
VVFN+D V+++ + +IF +G +KE+R+ P K H + IEFYDVR A A++ +N ++
Sbjct: 356 VVFNVDPSVTNNDIHKIFSDYGEIKEIRDAPQKGHHKVIEFYDVRAAEGAVRALNRSDLA 415
Query: 292 GKHV 295
GK +
Sbjct: 416 GKKI 419
>gi|356507390|ref|XP_003522450.1| PREDICTED: protein MEI2-like 4-like [Glycine max]
Length = 976
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N+ GT+++ NLDS V LK+IF +G ++E+ E P H
Sbjct: 335 RKLDIHYSIPKGNSPEKDIGHGTLMISNLDSSVLDDELKQIFGFYGEIREIYEYPQLNHV 394
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
+FIEFYDVR A +L+ +NG GKH+ +E
Sbjct: 395 KFIEFYDVRAAEASLRALNGICFAGKHIKLE 425
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S LK +F+ +G ++ + + I +YD+R A A+K + +
Sbjct: 272 TLFVRNINSNVEDSELKALFEQYGNIRTIYTACKYRGFVMISYYDLRAAQNAMKALQNRS 331
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTI 326
+ + + I +S P G+S + + + S+L+ S +
Sbjct: 332 LRSRKLDIHYSIPKGNSPEKDIGHGTLMISNLDSSVL 368
>gi|357464937|ref|XP_003602750.1| Mei2-like protein [Medicago truncatula]
gi|355491798|gb|AES73001.1| Mei2-like protein [Medicago truncatula]
Length = 966
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + ++ R + ++ +P N GT++
Sbjct: 296 LYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTEKDIGHGTLM 355
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+ LDS V LK IF +G +KE+ E P H ++IEFYDVR A +L+ +NG + G
Sbjct: 356 ISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLRSLNGICLAG 415
Query: 293 KHVVIEFSRP 302
KH+ +E P
Sbjct: 416 KHIKLEPGHP 425
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N+ S S LK +F+ +G ++ L KH+ F I +YD+R A A+K +
Sbjct: 268 TLFVGNITSNAEDSELKALFEQYGDIRTLYTAC--KHRGFVMISYYDLRAAQNAMKALQN 325
Query: 288 QEIYGKHVVIEFSRPGG 304
+ + + + I +S P G
Sbjct: 326 RTLSSRKLDIRYSIPKG 342
>gi|356516483|ref|XP_003526923.1| PREDICTED: protein MEI2-like 4-like [Glycine max]
Length = 925
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P NA GT+++ +LDS V + LK+IF +G ++E+ E P H
Sbjct: 288 RKLDIHYSIPKGNAPEKDIGHGTLMISDLDSSVLNDELKQIFGFYGEIREIYEYPQLNHV 347
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
+FIEFYDVR A +L+ +NG GKH+ +E
Sbjct: 348 KFIEFYDVRAAEASLRALNGICFAGKHIKLE 378
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S LK +F+ +G ++ + + I +YD+R A A+K + +
Sbjct: 225 TLFVRNINSNVEDSELKALFEQYGDIRTIYTACKYRGFVMISYYDLRAAQNAMKALQNRS 284
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTI 326
+ + + I +S P G++ + + + S L+ S +
Sbjct: 285 LRSRKLDIHYSIPKGNAPEKDIGHGTLMISDLDSSVL 321
>gi|302852287|ref|XP_002957664.1| hypothetical protein VOLCADRAFT_98760 [Volvox carteri f.
nagariensis]
gi|300256958|gb|EFJ41213.1| hypothetical protein VOLCADRAFT_98760 [Volvox carteri f.
nagariensis]
Length = 1631
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQGT+ VFNLD ++ L +F FG VK++RE+P + +Q+FI FYD R A +AL+ MN
Sbjct: 524 NQGTVTVFNLDPDTTNEHLVWLFSKFGDVKDIRESPDRSNQKFITFYDTRHALEALRLMN 583
Query: 287 GQEIYGK 293
E GK
Sbjct: 584 KAEHLGK 590
>gi|223944785|gb|ACN26476.1| unknown [Zea mays]
gi|413942447|gb|AFW75096.1| hypothetical protein ZEAMMB73_185504 [Zea mays]
Length = 940
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF +P N N GT+VV +DS +SS L + F +G VKE+ ++P +++F+EF
Sbjct: 342 QFSLPKENVPNKDPNNGTLVVSLIDSSISSHDLLQKFSVYGDVKEIYKSPTSCNKKFVEF 401
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
YD+R A +AL ++N EI + +E S GG F
Sbjct: 402 YDIRAAQEALNDLNKGEISCSQIKVEHSFSGGAGSCF 438
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF-IEFYDVRDAAKAL 282
D ++ ++V N++ G+ S L+ +FQ +G V+ +T K H + +YD+R A A+
Sbjct: 268 DKHHSRALIVKNINPGIEGSDLRALFQQYGDVQTF-DTSCKSHGIVTVSYYDIRAAQDAV 326
Query: 283 KEMNGQEIYGKHVVIEFSRP 302
+ ++ + + + ++FS P
Sbjct: 327 RAVHNKPLGLMKLDVQFSLP 346
>gi|293333863|ref|NP_001169543.1| uncharacterized protein LOC100383420 [Zea mays]
gi|224030017|gb|ACN34084.1| unknown [Zea mays]
gi|413942448|gb|AFW75097.1| hypothetical protein ZEAMMB73_185504 [Zea mays]
Length = 939
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF +P N N GT+VV +DS +SS L + F +G VKE+ ++P +++F+EF
Sbjct: 341 QFSLPKENVPNKDPNNGTLVVSLIDSSISSHDLLQKFSVYGDVKEIYKSPTSCNKKFVEF 400
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
YD+R A +AL ++N EI + +E S GG F
Sbjct: 401 YDIRAAQEALNDLNKGEISCSQIKVEHSFSGGAGSCF 437
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF-IEFYDVRDAAKAL 282
D ++ ++V N++ G+ S L+ +FQ +G V+ +T K H + +YD+R A A+
Sbjct: 267 DKHHSRALIVKNINPGIEGSDLRALFQQYGDVQTF-DTSCKSHGIVTVSYYDIRAAQDAV 325
Query: 283 KEMNGQEIYGKHVVIEFSRP 302
+ ++ + + + ++FS P
Sbjct: 326 RAVHNKPLGLMKLDVQFSLP 345
>gi|47834695|gb|AAT39001.1| AML6 [Hordeum vulgare]
Length = 919
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF +P NA G N+G + V N+D VS+ L + +G VKE+ +++ +EF
Sbjct: 314 QFCIPKGNASDKGMNEGILAVSNIDPSVSNDDLLQALTVYGDVKEISRASTSCNKKLVEF 373
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
YDVR A AL ++N I G + E S PGG
Sbjct: 374 YDVRAAEAALYDLNKGAISGPKIKAEVSNPGG 405
>gi|326506334|dbj|BAJ86485.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF +P NA G N+G + V N+D VS+ L + +G VKE+ +++ +EF
Sbjct: 314 QFCIPKGNASDKGMNEGILAVSNIDPSVSNDDLLQALTVYGDVKEISRASTSCNKKLVEF 373
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
YDVR A AL ++N I G + E S PGG
Sbjct: 374 YDVRAAEAALYDLNKGAISGPKIKAEVSNPGG 405
>gi|357135101|ref|XP_003569150.1| PREDICTED: protein MEI2-like 3-like [Brachypodium distachyon]
Length = 916
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF + N G N+G +VV N+ S VS+ L +I A+G VKE+ +++ +EF
Sbjct: 309 QFFITKENVSEQGINKGILVVSNIGSSVSNDDLLQILTAYGDVKEISRASASCNKKLVEF 368
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
YDVR A AL+++N G + +E S PGG
Sbjct: 369 YDVRAAEAALQDLNKGNSSGPKIKVEVSNPGG 400
>gi|159484060|ref|XP_001700078.1| RNA-binding protein [Chlamydomonas reinhardtii]
gi|158272574|gb|EDO98372.1| RNA-binding protein [Chlamydomonas reinhardtii]
Length = 1003
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
+QGT+ +FNLD S+ L +F FG VK++RE+P ++ Q+FI FYD R A AL+ MN
Sbjct: 173 SQGTVSLFNLDPDTSNDHLVWLFSKFGDVKDIRESPDRRSQKFITFYDTRHALAALRAMN 232
Query: 287 GQEIYGK 293
E GK
Sbjct: 233 KAEHLGK 239
>gi|15240750|ref|NP_196346.1| MEI2-like protein 4 [Arabidopsis thaliana]
gi|75335654|sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName:
Full=MEI2-like protein 4
gi|7546707|emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana]
gi|110742203|dbj|BAE99028.1| Mei2-like protein [Arabidopsis thaliana]
gi|332003750|gb|AED91133.1| MEI2-like protein 4 [Arabidopsis thaliana]
Length = 907
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L+ GR + ++ +P N + +++G + V NLDS +S+ L IF ++G ++E+R T
Sbjct: 271 LLRGRKLDIRYSIPKENP-KENSSEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMH 329
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHS 306
+ Q +IEF+DVR A AL+ +NG E+ G+ + + + P G S
Sbjct: 330 ENSQVYIEFFDVRKAKVALQGLNGLEVAGRQLKLAPTCPEGTS 372
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+DS + L +F+ FG V+ L + + +YD+R A KA + ++G+ +
Sbjct: 213 LFVRNVDSSIEDCELGVLFKQFGDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLL 272
Query: 291 YGKHVVIEFSRP 302
G+ + I +S P
Sbjct: 273 RGRKLDIRYSIP 284
>gi|297806757|ref|XP_002871262.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317099|gb|EFH47521.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 897
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L+ GR + ++ +P N + +++G + V NLDS +S+ L IF + G ++E+R T
Sbjct: 268 LLRGRKLDIRYSIPKENP-KENSSEGALWVNNLDSSISNEELHRIFSSCGEIREVRRTMH 326
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHS 306
+ Q +IEF+DVR A AL+ +NG E+ G+ + + + P G S
Sbjct: 327 ENSQVYIEFFDVRKAEVALQGLNGLEVAGRQLKLAPTCPEGTS 369
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+DS + L+ +F+ +G +++L + + +YD+R A A + ++G+ +
Sbjct: 210 LFVRNVDSIIEDCELRVLFKQYGDIRDLHTAGKIRGFIMVSYYDIRSAQNAARALHGRLL 269
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSLN 322
G+ + I +S P + K+ NSS A +N
Sbjct: 270 RGRKLDIRYSIPKENPKE----NSSEGALWVN 297
>gi|115461577|ref|NP_001054388.1| Os05g0102800 [Oryza sativa Japonica Group]
gi|75326520|sp|Q75M35.2|OML3_ORYSJ RecName: Full=Protein MEI2-like 3; Short=OML3; AltName:
Full=MEI2-like protein 3
gi|57863901|gb|AAW56930.1| unknown protein [Oryza sativa Japonica Group]
gi|57863908|gb|AAS88822.2| unknown protein [Oryza sativa Japonica Group]
gi|88193637|dbj|BAE79765.1| MEI2-like RNA binding protein [Oryza sativa Japonica Group]
gi|113577939|dbj|BAF16302.1| Os05g0102800 [Oryza sativa Japonica Group]
gi|215767738|dbj|BAG99966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768354|dbj|BAH00583.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629871|gb|EEE62003.1| hypothetical protein OsJ_16784 [Oryza sativa Japonica Group]
Length = 955
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF P N ++G +VV N+DS +S+ L ++ +G VKE+ +P+ ++F+EF
Sbjct: 339 QFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEF 398
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
YDVR A +AL ++N I G +E S+ G
Sbjct: 399 YDVRAAEEALHDLNKGGISGPKFKVELSQHG 429
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTLV+ + ++ ++ + + +G++R + G VTV +YD+R A+ A + +
Sbjct: 268 PSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALH 327
Query: 141 EQHMQLQQ 148
+ + L +
Sbjct: 328 SKPLGLMK 335
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+VV N+ + + S L +FQ +G ++ L + KH F + +YD+R A A++ ++
Sbjct: 271 TLVVRNITANIEDSDLTVLFQQYGDIRMLYTS--FKHHGFVTVSYYDIRAAQNAMRALHS 328
Query: 288 QEIYGKHVVIEFSRP 302
+ + + ++FS P
Sbjct: 329 KPLGLMKLDVQFSFP 343
>gi|218195915|gb|EEC78342.1| hypothetical protein OsI_18088 [Oryza sativa Indica Group]
Length = 955
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF P N ++G +VV N+DS +S+ L ++ +G VKE+ +P+ ++F+EF
Sbjct: 339 QFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEF 398
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
YDVR A +AL ++N I G +E S+ G
Sbjct: 399 YDVRAAEEALHDLNKGGISGPKFKVELSQHG 429
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTLV+ + ++ ++ + + +G++R + G VTV +YD+R A+ A + +
Sbjct: 268 PSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALH 327
Query: 141 EQHMQLQQ 148
+ + L +
Sbjct: 328 SKPLGLMK 335
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+VV N+ + + S L +FQ +G ++ L + KH F + +YD+R A A++ ++
Sbjct: 271 TLVVRNITANIEDSDLTVLFQQYGDIRMLYTS--FKHHGFVTVSYYDIRAAQNAMRALHS 328
Query: 288 QEIYGKHVVIEFSRP 302
+ + + ++FS P
Sbjct: 329 KPLGLMKLDVQFSFP 343
>gi|66819431|ref|XP_643375.1| hypothetical protein DDB_G0276005 [Dictyostelium discoideum AX4]
gi|60471502|gb|EAL69459.1| hypothetical protein DDB_G0276005 [Dictyostelium discoideum AX4]
Length = 1984
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 227 NQGTIVVFNLDSGVSSST----LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
+ GT+V+FN D+ S+++ L FG ++E+RE LK +FIEFYD+RDA A+
Sbjct: 1511 DHGTLVLFNFDAVFSTNSNTHMLTSALNQFGQIREIRE-DLKNKLKFIEFYDIRDAIAAV 1569
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKK------FF-----YANSSSCASSLNYSTIYQTRN 331
+ Q +GK +++ S HSKK F +++ C LNY TI N
Sbjct: 1570 NALKKQVFFGKKLLVRLSVL-DHSKKSQNNTTVFNVSDQFSDLVCCDFDLNY-TIKINDN 1627
Query: 332 SDCPPPPLSA 341
D PLS+
Sbjct: 1628 DDFENQPLSS 1637
>gi|87240848|gb|ABD32706.1| RNA-binding region RNP-1 (RNA recognition motif); RNA recognition
motif 2 [Medicago truncatula]
Length = 722
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L + R + +P + G NQGT+ VF DS +S++ + IF G +KE+ E P
Sbjct: 199 LFSCRKFDIHYSIPKDSPSRKGVNQGTLAVFLYDSSISNTEIHNIFNVHGDIKEIHENPH 258
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
H + IEFY+ A KAL ++N + K + +E
Sbjct: 259 SWHHKLIEFYNFEAAEKALHDLNRNDTSMKRLKVE 293
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+DS V S LK +F+ FG + + I +YD+R A KA++ + Q
Sbjct: 140 TLFVRNIDSEVEDSELKALFEQFGDIDTFDRDCKHQGNAMISYYDMRAAQKAMRALQNQL 199
Query: 290 IYGKHVVIEFSRP 302
+ I +S P
Sbjct: 200 FSCRKFDIHYSIP 212
>gi|357512633|ref|XP_003626605.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355501620|gb|AES82823.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 751
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L + R + +P + G NQGT+ VF DS +S++ + IF G +KE+ E P
Sbjct: 191 LFSCRKFDIHYSIPKDSPSRKGVNQGTLAVFLYDSSISNTEIHNIFNVHGDIKEIHENPH 250
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
H + IEFY+ A KAL ++N + K + +E
Sbjct: 251 SWHHKLIEFYNFEAAEKALHDLNRNDTSMKRLKVE 285
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+DS V S LK +F+ FG + + I +YD+R A KA++ + Q
Sbjct: 132 TLFVRNIDSEVEDSELKALFEQFGDIDTFDRDCKHQGNAMISYYDMRAAQKAMRALQNQL 191
Query: 290 IYGKHVVIEFSRP 302
+ I +S P
Sbjct: 192 FSCRKFDIHYSIP 204
>gi|357520613|ref|XP_003630595.1| AML1 [Medicago truncatula]
gi|355524617|gb|AET05071.1| AML1 [Medicago truncatula]
Length = 964
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P NA GT+++ LDS VS+ K IF +G +K++ E P KH
Sbjct: 333 RKLDIHYSIPKVNAPEKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHL 392
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+FIEFYDVR A AL+ +N EI GK + +E P
Sbjct: 393 KFIEFYDVRAAEAALRALNRIEIAGKQIKLEPGHP 427
>gi|357502679|ref|XP_003621628.1| Terminal ear1-like protein [Medicago truncatula]
gi|355496643|gb|AES77846.1| Terminal ear1-like protein [Medicago truncatula]
Length = 804
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 216 VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV 275
+P + +G NQGT+ VF DS +S++ L+ I +G +KE+ E P + + IEFYD
Sbjct: 265 IPKDSPSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEIHENPRSQRHKLIEFYDF 324
Query: 276 RDAAKALKEMNGQEIYGKHVVIE 298
R A AL +N + K + ++
Sbjct: 325 RAADAALHGINRNDTTMKRLKVD 347
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+DS V S LK +F+ FG + T + I +YD+R A A++ +N +
Sbjct: 194 TLFVRNIDSDVKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRALNNR- 252
Query: 290 IYGK 293
++G+
Sbjct: 253 LFGR 256
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEI 139
P+RTL + + DV +++++ E FG++ +G + +YD+R A+ A + +
Sbjct: 191 PSRTLFVRNIDSDVKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRAL 249
>gi|397310734|gb|AFO38380.1| putative Mei2 protein, partial [Glycine max]
Length = 860
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P NA GT+++ LDS V LK+IF +G +KE+ E P +
Sbjct: 293 RKLDIHYSIPKVNAPEKDIGHGTLMLSGLDSPVLDDELKQIFGFYGEIKEIYEYPEMNNH 352
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+FIEFYDVR A AL+ +N +I GK + +E P
Sbjct: 353 KFIEFYDVRAAEAALRALNKIDISGKQIKLEPGHP 387
>gi|356527581|ref|XP_003532387.1| PREDICTED: protein MEI2-like 1-like [Glycine max]
Length = 955
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
+ R + + +P NA GT+++ LDS V + LK+IF +G +KE+ E
Sbjct: 315 LGSRKLDIHYSIPKVNAPEKDIGHGTLMLSGLDSPVLNDELKQIFGFYGEIKEIYEYSEM 374
Query: 265 KHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+ +FIEFYDVR A AL+ +N +I GK + +E P
Sbjct: 375 NNHKFIEFYDVRAAEAALRALNKIDIAGKQIKLEPGHP 412
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVK--ELRETPLKKHQR---FIEFYDVRDAA 279
GNN + V NL + V L+++F FG V+ E+ P+ K R F+ F DVRDA
Sbjct: 64 GNN---LYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAE 120
Query: 280 KALKEMNGQEIYGKHVVIEFS-RPGGHSK 307
A+KE+N QE+ G+ + +E + R GH K
Sbjct: 121 DAVKELNNQEVQGRKMRVEHAKRKRGHEK 149
>gi|413918185|gb|AFW58117.1| hypothetical protein ZEAMMB73_452653 [Zea mays]
Length = 766
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
++V+ NL++ +++ L +IF FG +KE+ T H + IEF+DVR A A +N E
Sbjct: 119 SMVIVNLEASITNDDLHQIFGVFGEIKEIHPTSDNDHYKSIEFFDVRAAEAAQYALNRSE 178
Query: 290 IYGKHVVIEFSRPGG 304
I G +E S GG
Sbjct: 179 ISGNKNKLEPSCLGG 193
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI--EFYDVRDAAKALKEMNGQ 288
+ V N+DS V S LK +F+ +G ++ L + KH F+ +YD+R A A++ + +
Sbjct: 36 LFVGNIDSNVEDSELKFMFEQYGDMQTLNASC--KHHGFVMVSYYDIRSAENAMRALQSK 93
Query: 289 EIYGKHVVIEFSRP 302
+ + + I +S P
Sbjct: 94 PLRCRKLDIRYSSP 107
>gi|401410022|ref|XP_003884459.1| hypothetical protein NCLIV_048580 [Neospora caninum Liverpool]
gi|325118877|emb|CBZ54429.1| hypothetical protein NCLIV_048580 [Neospora caninum Liverpool]
Length = 420
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 65/230 (28%)
Query: 77 PSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQM--ERLMEGIVTVHFYDLRHAEM 134
P +RTL +P DV+E +R + G+++ V + E+ M V FYDLRHAE
Sbjct: 60 PDALQSRTLFFGRLPEDVTEDTLRDVVAQHGDLKKVAVYPEKRM---AFVEFYDLRHAEA 116
Query: 135 AFKEIREQHM---QLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMN 191
A +R + +++ Q +K P + D N L
Sbjct: 117 ARDALRGSDVLGKRVEVQFSAVKRP--------DKDGNTGTLYV---------------- 152
Query: 192 SYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQA 251
RPV V + D N+ LD+ +E+F
Sbjct: 153 ----------------RPV---STVHVSGSWTDPNS--------LDA------YRELFAK 179
Query: 252 FGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
G +K++ ++ ++F+E++D+RDA KAL +NG G + I F++
Sbjct: 180 HGDLKKVSANRKRETEKFVEYFDLRDAQKALDSLNGYVFNGATLHICFAQ 229
>gi|67616525|ref|XP_667492.1| RNA-binding protein [Cryptosporidium hominis TU502]
gi|54658648|gb|EAL37276.1| RNA-binding protein [Cryptosporidium hominis]
Length = 394
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 203 GLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSST------LKEIFQAFGPVK 256
LV GR + AQ+ + + N GT+ + + S +++ KE+F A+G VK
Sbjct: 133 SLVQGRIIDAQYSRGRDSRLSRDTNTGTLYIKPIVSNKTATDPNTEDDYKELFCAYGEVK 192
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
++ ++ ++F+EFYD+R A + K +NG + G V++E HS+ NS S
Sbjct: 193 KVSSNRKRESEKFVEFYDIRGAEASQKALNGYDFNG--VILEIQFANTHSRTL---NSDS 247
Query: 317 CASS 320
A++
Sbjct: 248 RATT 251
>gi|443897421|dbj|GAC74762.1| protein Mei2 [Pseudozyma antarctica T-34]
Length = 636
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 169 NNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP----TCNAVPD 224
N +A Y + A M+ AP+ GRP+ + +P
Sbjct: 292 NKRGIAFVTYYDLRSARDAMLAMKGAPL---------GGRPINIHYSLPREEDKAQRCDR 342
Query: 225 GNNQGTI--VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
NQGT+ V+ N ++ +++ F FG +K++R+ P +K+ RF+E++D R A
Sbjct: 343 DKNQGTLFSVLKNAQQDLTDEAIRQAFAEFGDIKKIRDYPGQKNSRFVEYFDSRACQLAH 402
Query: 283 KEMNGQEIYGKHVVIEFS 300
+NGQ ++F+
Sbjct: 403 DRLNGQSFLDGQWDLKFA 420
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V ++ + S +K F+ FG +K + K+ F+ +YD+R A A+ M G
Sbjct: 259 TLFVRSIQFEIDSQFVKREFEKFGQIKTFFDMVNKRGIAFVTYYDLRSARDAMLAMKGAP 318
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+ G+ + I +S P K + C N T++
Sbjct: 319 LGGRPINIHYSLPREEDK------AQRCDRDKNQGTLF 350
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 22/167 (13%)
Query: 218 TCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-------FI 270
T N N TI V NLD V+ + L EIF G V ++ ++KH F+
Sbjct: 7 TSNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFV 66
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH-----------SKKFFYANSSSCAS 319
EF D R A +A+++MNG++I+ + +++P + + F+ A+
Sbjct: 67 EFADPRVAEQAIQDMNGRKIFNYEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAA 126
Query: 320 SLNYSTIYQ--TRNSDCPPPPLSADPPSYSPRSFASQAPHFRKKSPS 364
+N + Q + + DP S R F A FR K+ +
Sbjct: 127 EINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVA--FRDKTDA 171
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVK--ELRETPLKKHQR---FIEFYDVRDAA 279
GNN + V NL V+ L+++F+ FG ++ E+ P+ + R F+ F DVRDA+
Sbjct: 73 GNN---LYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDAS 129
Query: 280 KALKEMNGQEIYGKHVVIEFS-RPGGHSK 307
A++E+NG++I G+ + +E + R GH K
Sbjct: 130 DAVQELNGKDIQGRRMRVEHAKRKCGHPK 158
>gi|18424532|ref|NP_568946.1| MEI2-like protein 1 [Arabidopsis thaliana]
gi|79331867|ref|NP_001032122.1| MEI2-like protein 1 [Arabidopsis thaliana]
gi|75331393|sp|Q8W4I9.1|AML1_ARATH RecName: Full=Protein MEI2-like 1; Short=AML1; AltName:
Full=MEI2-like protein 1
gi|17064920|gb|AAL32614.1| Mei2-like protein [Arabidopsis thaliana]
gi|31711778|gb|AAP68245.1| At5g61960 [Arabidopsis thaliana]
gi|222422847|dbj|BAH19410.1| AT5G61960 [Arabidopsis thaliana]
gi|332010159|gb|AED97542.1| MEI2-like protein 1 [Arabidopsis thaliana]
gi|332010160|gb|AED97543.1| MEI2-like protein 1 [Arabidopsis thaliana]
Length = 915
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C + + S + + L+ G + ++ + N ++G ++
Sbjct: 246 LHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTSKGALL 305
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
V NLDS +S+ L + +++G VKE+R T Q +IEF+DVR AA AL +NG E+ G
Sbjct: 306 VNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAG 365
Query: 293 KHVVIEFSRPGG 304
K + + + P G
Sbjct: 366 KKLQLVPTYPEG 377
>gi|2443329|dbj|BAA22374.1| Mei2-like protein [Arabidopsis thaliana]
gi|9758396|dbj|BAB08883.1| Mei2-like protein [Arabidopsis thaliana]
Length = 884
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C + + S + + L+ G + ++ + N ++G ++
Sbjct: 215 LHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTSKGALL 274
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
V NLDS +S+ L + +++G VKE+R T Q +IEF+DVR AA AL +NG E+ G
Sbjct: 275 VNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAG 334
Query: 293 KHVVIEFSRPGG 304
K + + + P G
Sbjct: 335 KKLQLVPTYPEG 346
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVK--ELRETPLKKHQR---FIEFYDVRDAA 279
GNN + V NL V+ + L ++F FG ++ E+ P+ + R F+ F DVRDA
Sbjct: 28 GNN---LYVANLAHRVTETELNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDAN 84
Query: 280 KALKEMNGQEIYGKHVVIEFS-RPGGHSK 307
A++E+NG++I G+ + +E + R GH+K
Sbjct: 85 DAVQELNGKDIQGRRIRVEHARRKRGHTK 113
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G + + NL +++ F+ FG +KE+ LK F+EF DVRDA A+ EMNG+
Sbjct: 2 GKVFIGNLTDRAEGRDVEDAFRKFGRIKEI---SLKNGFGFVEFDDVRDAEDAIHEMNGE 58
Query: 289 EIYGKHVVIEFSR 301
+ G + +E ++
Sbjct: 59 RLCGDRITVELAK 71
>gi|66815475|ref|XP_641754.1| hypothetical protein DDB_G0279255 [Dictyostelium discoideum AX4]
gi|60469789|gb|EAL67776.1| hypothetical protein DDB_G0279255 [Dictyostelium discoideum AX4]
Length = 1698
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 212 AQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
++ IV C ++GT++ F+ D + + + F FG +K++R++P K Q+F+
Sbjct: 978 SKLIVNYCFDKDQTVDKGTLIATFSNDDQIKN--IVNDFSKFGEIKDIRDSPNKPLQKFV 1035
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
EFY++ KA+ +N +I + FS GG SK NS+
Sbjct: 1036 EFYNINSTLKAINNLNSDKIK-----VAFSHHGGSSKDLIKLNSTEA 1077
>gi|254564595|ref|XP_002489408.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|238029204|emb|CAY67124.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|328349837|emb|CCA36237.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Komagataella pastoris CBS 7435]
Length = 865
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 170 NNNLATGCYDNQVVAESLMIMNSYAPVLPPPAR-GLVAGRPVWAQFIVPTCNAVPDGNNQ 228
NN A + + AES + +NS P+L P L +P + V N P N++
Sbjct: 711 NNGFAFITFKEKDAAESALELNS-VPLLDRPLDVSLAKKKP--KKVSVLEMNPAPKKNSK 767
Query: 229 -GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
TI F+L V+SS L +IF A GP+ ++ P + H FI + DV ++ +A+ +NG
Sbjct: 768 LTTIEAFDLPETVNSSQLMKIFSAIGPISKITLKP-ESHSAFIAYEDVNNSGRAMLVLNG 826
Query: 288 QEIYG 292
+++ G
Sbjct: 827 KQVDG 831
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
N + V L S ++ F+ +G +R+ LK F+EF D RDA A+ E+
Sbjct: 3 NMSARVYVGRLSYRASERDIEHFFRGYG---RIRDIVLKNGFGFVEFDDPRDADDAVYEL 59
Query: 286 NGQEIYGKHVVIEFSRPGGHSKKFF 310
NG+E+ G+ V++EFSR G S+ F
Sbjct: 60 NGKELCGERVILEFSRRGPRSRMGF 84
>gi|323509073|dbj|BAJ77429.1| cgd3_2580 [Cryptosporidium parvum]
Length = 378
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSST------LKEIFQAFGPVKE 257
LV GR + AQ+ N GT+ + + S +++ KE+F A+G VK+
Sbjct: 118 LVQGRIIDAQYSRGRDGRPSRDTNTGTLYIKPIVSNKTATDPNTEDDYKELFCAYGEVKK 177
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
+ ++ ++F+EFYD+R A + K +NG + G V++E HS+ ++S +
Sbjct: 178 VSSNRKRESEKFVEFYDIRGAEASQKALNGYDFNG--VILEIQFANTHSRT-LNSDSRAT 234
Query: 318 ASSLN 322
ASS N
Sbjct: 235 ASSRN 239
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
N + V L S ++ F+ +G +R+ LK F+EF D RDA A+ E+
Sbjct: 3 NMSARVYVGRLSYRASERDIEHFFRGYG---RIRDIVLKNGFGFVEFDDPRDADDAVYEL 59
Query: 286 NGQEIYGKHVVIEFSRPGGHSKKFF 310
NG+E+ G+ V++EFSR G S+ F
Sbjct: 60 NGKELCGERVILEFSRRGPRSRMGF 84
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
N + V L S ++ F+ +G +R+ LK F+EF D RDA A+ E+
Sbjct: 3 NMSARVYVGRLSYRASERDIEHFFRGYG---RIRDIVLKNGFGFVEFDDPRDADDAVYEL 59
Query: 286 NGQEIYGKHVVIEFSRPGGHSKKFF 310
NG+E+ G+ V++EFSR G S+ F
Sbjct: 60 NGKELCGERVILEFSRRGPRSRMGF 84
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding protein
srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>gi|66359282|ref|XP_626819.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|46228164|gb|EAK89063.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|323510271|dbj|BAJ78029.1| cgd3_2580 [Cryptosporidium parvum]
Length = 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSST------LKEIFQAFGPVKE 257
LV GR + AQ+ N GT+ + + S +++ KE+F A+G VK+
Sbjct: 134 LVQGRIIDAQYSRGRDGRPSRDTNTGTLYIKPIVSNKTATDPNTEDDYKELFCAYGEVKK 193
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
+ ++ ++F+EFYD+R A + K +NG + G V++E HS+ ++S +
Sbjct: 194 VSSNRKRESEKFVEFYDIRGAEASQKALNGYDFNG--VILEIQFANTHSRT-LNSDSRAT 250
Query: 318 ASSLN 322
ASS N
Sbjct: 251 ASSRN 255
>gi|388858385|emb|CCF48076.1| uncharacterized protein [Ustilago hordei]
Length = 644
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 178 YDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP----TCNAVPDGNNQGTI-- 231
YD + ++++ M AP GRP+ + +P NQGT+
Sbjct: 300 YDLRAARDAMLAMKG-APF---------GGRPINIHYSLPREEDKAQRCDRDKNQGTLFS 349
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIY 291
V+ + +S + E+F FG VK++R+ P +K+ RF+E++D R A ++NG+
Sbjct: 350 VLKGANETLSDDAVHEVFSEFGDVKKVRDYPGQKNSRFVEYFDSRACQLAHDQLNGRPYL 409
Query: 292 GKHVVIEFS 300
++F+
Sbjct: 410 DGQWDLKFA 418
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V +++ S +K+ F+ FG +K + K+ FI +YD+R A A+ M G
Sbjct: 257 TLFVRSINFETDSEFVKQQFEKFGEIKTFFDMVEKRGIAFITYYDLRAARDAMLAMKGAP 316
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
G+ + I +S P K + C N T++
Sbjct: 317 FGGRPINIHYSLPREEDK------AQRCDRDKNQGTLF 348
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + +L GV +K+ F+ FG +KE+ LK FIEF D RDA A+ E+NG+E+
Sbjct: 7 IYIGHLPYGVRERDVKKFFKGFGRIKEI---LLKNGYGFIEFDDYRDADDAVYELNGREL 63
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 64 NGERVSVERAR 74
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G V++++S+P
Sbjct: 62 GGDRVILDYSKP 73
>gi|297797157|ref|XP_002866463.1| hypothetical protein ARALYDRAFT_919445 [Arabidopsis lyrata subsp.
lyrata]
gi|297312298|gb|EFH42722.1| hypothetical protein ARALYDRAFT_919445 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C + + S + + L+ G + ++ + N + +G ++
Sbjct: 246 LHTACKNRGFIMVSFYDIRAAQNAARALQNKLLRGTKLDIRYSISKENPLEKDTCKGALL 305
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
V NLDS +S+ L + +++G +KE+R T Q +IEF+DVR AA AL +NG E+ G
Sbjct: 306 VNNLDSSISNQELNRLVKSYGEIKEIRRTMHDNPQIYIEFFDVRAAAAALGGLNGLEVAG 365
Query: 293 KHVVI 297
K + +
Sbjct: 366 KKLQL 370
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T++V N+ S + L+ IF+ FG ++ L + + FYD+R A A + + +
Sbjct: 218 TLLVGNISSNIEDYELRVIFEQFGEIQALHTACKNRGFIMVSFYDIRAAQNAARALQNKL 277
Query: 290 IYGKHVVIEFS 300
+ G + I +S
Sbjct: 278 LRGTKLDIRYS 288
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 37/65 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL++ + ++ + +R E FGE++ + G + V FYD+R A+ A + ++
Sbjct: 215 PSRTLLVGNISSNIEDYELRVIFEQFGEIQALHTACKNRGFIMVSFYDIRAAQNAARALQ 274
Query: 141 EQHMQ 145
+ ++
Sbjct: 275 NKLLR 279
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-ETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ + NL L+ IF+ +G VKE++ + H FIEF D RDA AL + N E
Sbjct: 25 LFIGNLSKDADKRDLENIFKKYGTVKEIKIKATGSNHYGFIEFQDHRDAKDALDDCNNME 84
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTR 330
GK + +EF GH K N +C S N++T TR
Sbjct: 85 FKGKQIRLEF----GHGGKRRRENCFNCGYS-NHATKDCTR 120
>gi|242072838|ref|XP_002446355.1| hypothetical protein SORBIDRAFT_06g014670 [Sorghum bicolor]
gi|241937538|gb|EES10683.1| hypothetical protein SORBIDRAFT_06g014670 [Sorghum bicolor]
Length = 770
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+V+ NLD +++ L +IF G +KE+ H R IEF+DVR A A +N EI
Sbjct: 122 MVIVNLDPSITNDDLHQIFGVLGEIKEIHPISDNDHYRSIEFFDVRAAEAARYALNRSEI 181
Query: 291 YGKHVVIE 298
G + +E
Sbjct: 182 AGNKIKLE 189
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI--EFYDVRDAAKALKEMNGQ 288
+ V N+D + S LK +F+ +G ++ L + KH F+ +YDVR A A++ + +
Sbjct: 38 LFVGNIDRNIEDSELKLMFEQYGDMQTLNASC--KHHGFVMVSYYDVRSAENAMRALQSK 95
Query: 289 EIYGKHVVIEFSRP 302
+ + + I +S P
Sbjct: 96 SLRCRKLDIHYSIP 109
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L V L++ F+ +G +KE+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VFVGGLTYRVRERDLEKFFRKYGRIKEV---AMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSR--PGGHSKKFF------YANSSSCASSLNYST 325
G+ + +E +R P G + + Y +S A S+N +T
Sbjct: 62 LGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSADSVNRNT 104
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>gi|28302297|gb|AAH46684.1| LOC398498 protein, partial [Xenopus laevis]
Length = 531
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+P + I V N+D S + +F+ +G V + + F+ R+A KA
Sbjct: 61 MPHSEERMKIFVGNIDERTSEGEVTALFERYGAVLNC---AVMRQYAFVHMRGTREATKA 117
Query: 282 LKEMNGQEIYGKHVVIEFSRPG-GHSKKFFYAN-SSSCASS 320
++E+NG+E+ GK +++E S+P ++ K F N SSSC ++
Sbjct: 118 VEELNGRELNGKKMLVELSKPRPQNTWKIFVGNVSSSCEAA 158
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
P N I V N+ S ++ +++IF+ +G V E + K F+ +A A+
Sbjct: 138 PRPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLEC---DIVKDYAFVHMTRESEARAAI 194
Query: 283 KEMNGQEIYGKHVVIEFS----RPGG-----HSKK 308
+ +NG++I GK + +E S R GG HS++
Sbjct: 195 EALNGKDIKGKRINVEMSNKVQRSGGANGGSHSRR 229
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G +R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---NIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>gi|47550699|ref|NP_999861.1| heterogeneous nuclear ribonucleoprotein Q [Danio rerio]
gi|34784487|gb|AAH56750.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio
rerio]
gi|46249711|gb|AAH68373.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio
rerio]
Length = 630
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNLVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEILEKAFGQFGN 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K F+ F D A KAL EMNG+E+ G+H+ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFVHFNDRDGAVKALTEMNGKELEGEHIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSL 321
+ + +
Sbjct: 421 QAAKTQM 427
>gi|327290511|ref|XP_003229966.1| PREDICTED: RNA-binding protein 14-like [Anolis carolinensis]
Length = 607
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ S L+++FQA P L+ L K F+ D A +A+ ++NGQ +
Sbjct: 7 VFVGNVPEETSQVELRDLFQAVEPGAVLK-VALMKQFAFVHLRDEAAADRAIAKLNGQLV 65
Query: 291 YGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQ 328
+G VV+E SRP H+ K F N S+ +S ++Q
Sbjct: 66 HGHRVVVEHSRPRPTHTVKIFVGNVSATCTSGELRALFQ 104
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I V N+ + +S L+ +FQ FGPV E K F+ DAA A++ +NG+E+
Sbjct: 85 IFVGNVSATCTSGELRALFQEFGPVVECDTV---KDYAFVHMEKDEDAAAAIEHLNGREV 141
Query: 291 YGKHVVIEFS 300
G+ + +E S
Sbjct: 142 KGRRINVELS 151
>gi|343427689|emb|CBQ71216.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 642
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 178 YDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP----TCNAVPDGNNQGTI-- 231
YD + ++++ M L GRP+ + +P NQGT+
Sbjct: 294 YDLRSARDAMLAMKG----------ALFGGRPINIHYSLPREEDKAQRCDREKNQGTLFT 343
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIY 291
V+ ++ ++ +F FG +K++R+ P +K+ RF+E++D R A ++NGQ
Sbjct: 344 VLKGAHQDLNEDAVRHVFAEFGDLKKIRDYPGQKNSRFVEYFDSRACQLAHDQLNGQSYL 403
Query: 292 GKHVVIEFS 300
++F+
Sbjct: 404 DGQWDLKFA 412
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ S +K+ F+ FG +K + K+ FI +YD+R A A+ M G
Sbjct: 251 TLFVRNIQFETDSEYVKQQFEQFGQIKTFFDMVNKRGIAFITYYDLRSARDAMLAMKGAL 310
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
G+ + I +S P K + C N T++
Sbjct: 311 FGGRPINIHYSLPREEDK------AQRCDREKNQGTLF 342
>gi|189234965|ref|XP_973687.2| PREDICTED: similar to CG17838 CG17838-PB [Tribolium castaneum]
Length = 905
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL +S LKE F+A+G V+ +++ K FI F D +A KA++E++G+E
Sbjct: 357 VLYVRNLTQEISEEKLKEAFEAYGKVERVKKI---KDYAFIHFEDRENAVKAMEELDGKE 413
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G ++ + ++P KK
Sbjct: 414 MGGSNIEVSLAKPPSDKKK 432
>gi|156379079|ref|XP_001631286.1| predicted protein [Nematostella vectensis]
gi|156218324|gb|EDO39223.1| predicted protein [Nematostella vectensis]
Length = 683
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVRDAAKAL 282
+++ NL + + LKE F AFG V E P KK R F++F +V DAAKAL
Sbjct: 112 LIIRNLAFNCTEAILKETFSAFGEVSEA-SVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 170
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTI 326
+EMN ++I G+ V ++++ P K + N N +T+
Sbjct: 171 EEMNAKKILGRPVAVDWAVP----KSMYTENQEKHKKDYNSNTL 210
>gi|50415109|gb|AAH77356.1| LOC398498 protein [Xenopus laevis]
Length = 471
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+P + I V N+D S + +F+ +G V + + F+ R+A KA
Sbjct: 1 MPHSEERMKIFVGNIDERTSEGEVTALFERYGAVLNC---AVMRQYAFVHMRGTREATKA 57
Query: 282 LKEMNGQEIYGKHVVIEFSRPG-GHSKKFFYAN-SSSC 317
++E+NG+E+ GK +++E S+P ++ K F N SSSC
Sbjct: 58 VEELNGRELNGKKMLVELSKPRPQNTWKIFVGNVSSSC 95
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
P N I V N+ S ++ +++IF+ +G V E + K F+ +A A+
Sbjct: 78 PRPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLEC---DIVKDYAFVHMTRESEARAAI 134
Query: 283 KEMNGQEIYGKHVVIEFS----RPGG-----HSKK 308
+ +NG++I GK + +E S R GG HS++
Sbjct: 135 EALNGKDIKGKRINVEMSNKVQRSGGANGGSHSRR 169
>gi|209880247|ref|XP_002141563.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557169|gb|EEA07214.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 469
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVV---FNLDSGVSSSTL---KEIFQAFGPVKEL 258
V GR + Q+ + N GT+ V N V +T+ K++F A+G VK++
Sbjct: 121 VQGRIIDVQYSRGRDDRPSRDTNTGTLYVRPVVNDKGFVDPNTVDDYKQLFGAYGDVKKV 180
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCA 318
++ ++F+EFYD R A + K +NG + G VV+E HS+ N+ S
Sbjct: 181 SSNRKREAEKFVEFYDTRGAEASQKALNGYDFNG--VVLEIQFANTHSRTI---NADSKV 235
Query: 319 SSLNY--STIYQT-RNSDC 334
S NY S +QT +N DC
Sbjct: 236 MSKNYHPSGGHQTQQNHDC 254
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 82 TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIRE 141
+RTL L +P D++E VR E FG+++ V + +GI V ++D+R AE+A ++
Sbjct: 60 SRTLYLCKLPYDMTEEAVRELCEPFGDLKKVAVY-PQKGIAFVEYFDIRKAEVARNTLKN 118
Query: 142 QHMQ 145
+Q
Sbjct: 119 SQVQ 122
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + L ++ ++E+ + FG +K++ P +K F+E++D+R A A + +
Sbjct: 62 TLYLCKLPYDMTEEAVRELCEPFGDLKKVAVYP-QKGIAFVEYFDIRKAEVARNTLKNSQ 120
Query: 290 IYGKHVVIEFSR 301
+ G+ + +++SR
Sbjct: 121 VQGRIIDVQYSR 132
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EF++ R AA +L MN
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G++I GK V + ++ KK ANSSS S+L + D P + D
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKK--DANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EF++ R AA +L MN
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G++I GK V + ++ KK ANSSS S+L + D P + D
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKK--DANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 224 DGN-NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
DG+ N TI V NLDS V LKE+F +G + ++ P K F++F D A +AL
Sbjct: 243 DGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVK-IPAGKRCGFVQFADRSSAEEAL 301
Query: 283 KEMNGQEIYGKHVVIEFSR 301
K +NG ++ G+++ + + R
Sbjct: 302 KMLNGAQLSGQNIRLSWGR 320
>gi|270001371|gb|EEZ97818.1| hypothetical protein TcasGA2_TC000185 [Tribolium castaneum]
Length = 638
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL +S LKE F+A+G V+ +++ K FI F D +A KA++E++G+E
Sbjct: 354 VLYVRNLTQEISEEKLKEAFEAYGKVERVKKI---KDYAFIHFEDRENAVKAMEELDGKE 410
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G ++ + ++P KK
Sbjct: 411 MGGSNIEVSLAKPPSDKKK 429
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 222 VPDGN--NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYD 274
PD ++ +VV NL V + +K++F+AFG +K++R P + R F+EF +
Sbjct: 373 APDAKKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVR-LPKRFDGRHRGFAFVEFTN 431
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRP 302
RDAA A + +YG+H+VI+++ P
Sbjct: 432 PRDAAAARSSLKSAHLYGRHLVIDWADP 459
>gi|307173250|gb|EFN64303.1| Heterogeneous nuclear ribonucleoprotein Q [Camponotus floridanus]
Length = 683
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 302 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGK 361
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F D +A KA+ E+NG+E+ G H+ + ++P KK
Sbjct: 362 IERVKKI---KDYAFIHFEDRDNAVKAMNELNGKEMGGSHIEVSLAKPPSDKKK 412
>gi|383847619|ref|XP_003699450.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Megachile rotundata]
Length = 664
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE+F+ +G
Sbjct: 305 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKEVFEQYGN 364
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K F+ F + +A KA+ E+NG+EI G H+ + ++P KK
Sbjct: 365 IERVKKI---KDYAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKK 415
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
TI + NLD V+ L+ +F+ FG + + TP KK F+ F+D +DA +A++ ++G
Sbjct: 301 TIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATP-KKGCGFVHFFDRQDATEAIENLHGSM 359
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
I K V + + R N++ CA + Y Y
Sbjct: 360 IGSKRVRLSWGRH----------NATKCAIASMYQQQY 387
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>gi|332026895|gb|EGI66996.1| Heterogeneous nuclear ribonucleoprotein Q [Acromyrmex echinatior]
Length = 724
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 349 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGK 408
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F D +A KA+ E+NG+E+ G H+ + ++P KK
Sbjct: 409 IERVKKI---KDYAFIHFEDRDNAVKAMNELNGKEMGGSHIEVSLAKPPSDKKK 459
>gi|146079207|ref|XP_001463723.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067810|emb|CAM66090.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 954
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------------RF 269
VP G++ ++V NL + ++E+F AF ++ +R P K H F
Sbjct: 861 VPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVR-VPRKSHTFSSHRENNHRGFAF 919
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+EF +AA+AL+ + +YG+H+V+++++ GG
Sbjct: 920 VEFLSEAEAARALETLKATHLYGRHLVLQYAKLGG 954
>gi|407039318|gb|EKE39578.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 199
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK----KHQRFIEFYDVRDAAKAL 282
N+ + V NL LKE+F + G +K R K K F+ F D A KA+
Sbjct: 2 NRLEVYVGNLSLNTDKDKLKEVFASVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
EMNG+EI G VV++ SRP ++ Y +S
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSS 93
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
K+I + FG +L ET LK F+EF D RDA A+ E+NG+E+ G+ V++E +R
Sbjct: 16 KDIQRFFGGYGKLMETDLKNGYGFVEFEDTRDADDAVYELNGKELCGERVIVEHAR 71
>gi|398011431|ref|XP_003858911.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497122|emb|CBZ32193.1| hypothetical protein, conserved [Leishmania donovani]
Length = 952
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------------RF 269
VP G++ ++V NL + ++E+F AF ++ +R P K H F
Sbjct: 859 VPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVR-VPRKSHTFSSHRENNHRGFAF 917
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+EF +AA+AL+ + +YG+H+V+++++ GG
Sbjct: 918 VEFLSEAEAARALETLKATHLYGRHLVLQYAKLGG 952
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L++ F+ FG +R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFG---RIRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD +N ++ V N+D L+E F+ FG + ++ R+T + F+ F + RD
Sbjct: 7 PDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINERD 66
Query: 278 AAKALKEMNGQEIYGKHVVIEFSR 301
A A+K M+GQ++ GK V + ++
Sbjct: 67 AEDAIKHMDGQQLNGKEVYCQLAK 90
>gi|67473916|ref|XP_652707.1| splicing factor, arginine/serine-rich [Entamoeba histolytica
HM-1:IMSS]
gi|56469586|gb|EAL47321.1| splicing factor, arginine/serine-rich, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706789|gb|EMD46560.1| RNAbinding region RNP-1, putative [Entamoeba histolytica KU27]
Length = 199
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK----KHQRFIEFYDVRDAAKAL 282
N+ + V NL LKE+F + G +K R K K F+ F D A KA+
Sbjct: 2 NRLEVYVGNLSLNTDKDKLKEVFASVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
EMNG+EI G VV++ SRP ++ Y +S
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSS 93
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L+ V L+ F+ FG +RE +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFG---RIREISIKNGFGFVEFDDHRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSS 316
G V +E +R ++ + ++S
Sbjct: 62 LGDRVSVELARGIRRGADYYRSRAAS 87
>gi|432936836|ref|XP_004082303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Oryzias
latipes]
Length = 542
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL S V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLASAVTEELLEKTFSQFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KAL ++NG+++ G+H+ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFIHFEERDSAVKALGDLNGKDLEGEHIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSLNYSTIYQTRNSDCPPP 337
+ + + Y Y PPP
Sbjct: 421 QAAKTQM-YDEYYYYGPPHMPPP 442
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L + S L+ +F +G +RE LK+ FIEF D RDA +A +++G+++
Sbjct: 13 LYVGRLATRTRSRDLEHLFGRYG---RIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +V+EF++
Sbjct: 70 DGSRIVVEFAK 80
>gi|45360753|ref|NP_989050.1| RNA binding motif protein 14 [Xenopus (Silurana) tropicalis]
gi|38174074|gb|AAH61344.1| RNA binding motif protein 14 [Xenopus (Silurana) tropicalis]
gi|89269922|emb|CAJ81697.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 468
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+P+ + + I V N+D + + E+F+ +G V + K F+ +A KA
Sbjct: 1 MPNYDERMKIFVGNVDDSTTQEEITELFERYGTVVNC---AVMKQYAFVHMRGSEEATKA 57
Query: 282 LKEMNGQEIYGKHVVIEFSRPG-GHSKKFFYAN-SSSC 317
++++NG+E+ GK +++E S+P ++ K F N SSSC
Sbjct: 58 VEDLNGRELNGKKMLVELSKPRPQNTWKIFVGNVSSSC 95
>gi|429239844|ref|NP_595389.2| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|395398587|sp|Q9P789.2|YN8E_SCHPO RecName: Full=Pumilio domain-containing protein P35G2.14
gi|347834275|emb|CAB87376.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 1065
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL SGVS++T+ F A+G V +R KH F+ F V A L+E+NG+ I
Sbjct: 594 LWVGNLPSGVSATTVATTFSAYGTVSSIRMLS-HKHSAFLNFDSVETAKHVLEELNGKRI 652
Query: 291 Y--GKHVVIEFSRPG------------GHSKKF-----------FYANSSSCASSLNY-- 323
+ V I F++ G +K F Y + + S +
Sbjct: 653 FFGSDPVCISFAKVASSSSESSHSAVDGLNKAFSNVSFVPSLREVYDDLINVVQSFGFKD 712
Query: 324 -STIYQTRNSDCPPPPLSADPPSYSPRSFASQ---APHFRK 360
S IYQ N+ C +A PS S ++F+S+ AP R+
Sbjct: 713 LSKIYQILNAACELTDFAAQIPSIS-KAFSSRRLNAPKLRQ 752
>gi|148222587|ref|NP_001079614.1| RNA binding motif protein 14 [Xenopus laevis]
gi|80477004|gb|AAI08787.1| MGC52864 protein [Xenopus laevis]
Length = 467
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+P+ + + I V N+D + + E+F+ +G V + K F+ +A KA
Sbjct: 1 MPNYDERMKIFVGNVDDRTTQEEITELFERYGTVVNC---AVMKQYAFVHMRGAEEATKA 57
Query: 282 LKEMNGQEIYGKHVVIEFSRPG-GHSKKFFYAN-SSSCASS 320
++++NG+E+ GK +++E S+P ++ K F N SSSC S
Sbjct: 58 VEDLNGRELNGKKMLVELSKPRPQNTWKIFVGNVSSSCEGS 98
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
P N I V N+ S S +++IF+ +G V E + K F+ +A A+
Sbjct: 78 PRPQNTWKIFVGNVSSSCEGSEIRKIFEEYGRVVEC---DIVKDYAFVHMTRESEARAAI 134
Query: 283 KEMNGQEIYGKHVVIEFS 300
+ +NG+EI GK + +E S
Sbjct: 135 EALNGKEIKGKRINVEMS 152
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L + S L+ +F +G +RE LK+ FIEF D RDA +A +++G+++
Sbjct: 13 LYVSRLATRTRSRDLEHLFGRYG---RIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +V+EF++
Sbjct: 70 DGSRIVVEFAK 80
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDA 278
G +++V NL + L+E F+ FGP++++ PL+ + + F+EF+D RDA
Sbjct: 31 GGRTMSLLVRNLKYETTPEILREAFEKFGPIRDV-YIPLEYYTKKPRGFGFVEFHDFRDA 89
Query: 279 AKALKEMNGQEIYGKHVVI 297
AL+EM+G E+ G + +
Sbjct: 90 NMALREMDGGELDGNKIEV 108
>gi|345481380|ref|XP_001602182.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Nasonia vitripennis]
Length = 661
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 306 RRLGTGRMKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKECFEQYGK 365
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F + A KA++E+NG+E+ G H+ + ++P KK
Sbjct: 366 IERVKKI---KDYAFIHFEERECAVKAMRELNGKEMGGSHIEVSLAKPPSDKKK 416
>gi|410898108|ref|XP_003962540.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Takifugu
rubripes]
Length = 539
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL S V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNLVTVEWADPLEDPDPEVMAKVKVLFVRNLASSVTEELLEKAFSQFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KAL ++NG+++ G+H+ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFIHFEERDGAVKALADLNGKDLEGEHIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSLNYSTIYQTRNSDCPPP 337
+ + + Y Y PPP
Sbjct: 421 QAAKTHM-YDEYYYYGPPHMPPP 442
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G +RE LK+ FIEF D RDA +A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLEYLFGRYG---RIREVELKRDYAFIEFSDTRDADEARYNLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRILVEFAK 80
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G + V L ++ F+ FG ++E+ LK F+EF D RDA A+ E+NG+
Sbjct: 42 GRVYVGRLSYQARERDVERFFRGFGRIREI---NLKNGFGFVEFEDYRDADDAVYELNGK 98
Query: 289 EIYGKHVVIEFSR 301
E+ G+ V+IE +R
Sbjct: 99 ELVGERVIIEHAR 111
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G + V L ++ F+ FG ++E+ LK F+EF D RDA A+ E+NG+
Sbjct: 4 GRVYVGRLSYQARERDVERFFRGFGRIREI---NLKNGFGFVEFEDYRDADDAVYELNGK 60
Query: 289 EIYGKHVVIEFSR 301
E+ G+ V+IE +R
Sbjct: 61 ELVGERVIIEHAR 73
>gi|307212325|gb|EFN88129.1| Heterogeneous nuclear ribonucleoprotein Q [Harpegnathos saltator]
Length = 649
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 296 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGK 355
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F D +A +A+ E+NG+E+ G H+ + ++P KK
Sbjct: 356 IERVKKI---KDYAFIHFEDRDNAVRAMNELNGKEMGGSHIEVSLAKPPSDKKK 406
>gi|405972362|gb|EKC37135.1| Heterogeneous nuclear ribonucleoprotein Q [Crassostrea gigas]
Length = 628
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVW-AQFIVPTCNAV--PDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW IV + V PD + V NL S V+ +KE F FG
Sbjct: 300 RKLSTGRLKVWNCDVIVDWADPVDNPDDETMSKVKVLYVRNLTSEVTEDIMKEKFGEFGK 359
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ ++ K FI F D DA KA++ MNGQ+I + + ++P +KK
Sbjct: 360 IERAKKV---KDYGFIHFEDRDDAIKAMQAMNGQKIGKLEIEVSLAKPPSENKK 410
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EF++ R AA +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G++I GK V + ++ KK ANSSS S+L + D P + D
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKK--DANSSSVVSTLRSQDHFHVFVGDLSPEITTDD 121
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S ++E F+ FG +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIKDV-YLPIDYYTKEPRGFGFVEFYDAKDAEQALK 71
Query: 284 EMNGQEIYGKHVVI 297
EMNG EI G + +
Sbjct: 72 EMNGSEIDGSRIEV 85
>gi|144952800|gb|ABP04054.1| RNA-binding protein [Pinctada fucata]
Length = 624
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWA-QFIVPTCNAV--PDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L +GR VW IV + + PD + + V NL S V+ TLKE F +G
Sbjct: 304 RKLSSGRTKVWGCDVIVDWADPIDDPDSDTMSKVKVLYVRNLTSDVTEDTLKEKFGEYGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
V+ +++ K FI F + DA KA++ MNGQ++ + + ++P +KK
Sbjct: 364 VERVKKI---KDYGFIHFEERDDAVKAMEGMNGQKLGKLEMEVSLAKPPSENKK 414
>gi|440801545|gb|ELR22563.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 520
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ S TL ++F+ +G +K + K+ FI +YD+RDA +A +++ G +
Sbjct: 123 TLFVRNVSYNTSERTLMDLFKKYGEIKRVFNLIDKRGMAFITYYDIRDAQEAKRDLQGYD 182
Query: 290 IYGKHVVIEFSRP 302
G+ + I +S P
Sbjct: 183 FEGRPLDIHYSIP 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 207 GRPVWAQFIVPTCNAVPDGNNQGTI--VVFNLDSG---------VSSSTLKEIFQAFGPV 255
GRP+ + +P + N + + V L G +++ +K +F+ +G V
Sbjct: 185 GRPLDIHYSIPRDDEDQAKNEENNVSTVFARLRGGTGPLRDKPPMTNREVKRLFEEWGSV 244
Query: 256 KELRETPLKKHQRFIEFYDVRDAAKALKE 284
KE+RE K Q+F+EFYD+R + K LKE
Sbjct: 245 KEVRECRGKPFQKFVEFYDIRHSEKCLKE 273
>gi|71013548|ref|XP_758619.1| hypothetical protein UM02472.1 [Ustilago maydis 521]
gi|46098277|gb|EAK83510.1| hypothetical protein UM02472.1 [Ustilago maydis 521]
Length = 638
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 178 YDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP----TCNAVPDGNNQGTI-- 231
YD + ++++ M L GRP+ + +P NQGT+
Sbjct: 291 YDLRSARDAMLAMKG----------ALFGGRPINIHYSLPREEDKAQRCDRDKNQGTLFT 340
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIY 291
V+ ++ ++E+F FG VK++R+ P +K+ RF+E++D R A ++N +
Sbjct: 341 VLKGSRQDLNDDAVREVFAEFGDVKKIRDYPGQKNSRFVEYFDSRACQLAHDQLNARPYL 400
Query: 292 GKHVVIEFS 300
++F+
Sbjct: 401 DGQWDLKFA 409
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V +++ S +K+ F+ FG +K + K+ FI +YD+R A A+ M G
Sbjct: 248 TLFVRSINFETDSGFVKQQFEQFGQIKTFFDMVNKRGIAFITYYDLRSARDAMLAMKGAL 307
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
G+ + I +S P K + C N T++
Sbjct: 308 FGGRPINIHYSLPREEDK------AQRCDRDKNQGTLF 339
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAK 280
+ GTI V NL+ S L+E F+ +G V + ET K F++F D RDA
Sbjct: 32 DTAGTIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAED 91
Query: 281 ALKEMNGQEIYGKHVVIEFSR 301
A+K+ +GQ + G+ + F++
Sbjct: 92 AIKQADGQTMDGRTIKCNFAK 112
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 216 VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------F 269
V TC++ + + + V NL V+ L EIF GPV+ ++ P + +Q F
Sbjct: 34 VSTCSSA-EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGF 92
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
+E+ D+R A AL+ +NG++I+ + + ++ G +K+
Sbjct: 93 VEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTQNKE 131
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 55/228 (24%)
Query: 85 LVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLME-----GIVTVHFYDLRHAEMAFKEI 139
L + + +V E +RR+ E FGE+ GV++ E G V + D A+ A++
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 140 REQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP 199
++ + + + P + NS AP
Sbjct: 287 KDTELDGRTINLDYAKPRDA-------------------------------NSQAPREKA 315
Query: 200 PARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR 259
R G P+ N T+ V NL GV + ++E+F+ G ++ +R
Sbjct: 316 QTRARSFG-----------DQTSPESN---TLFVGNLVFGVDENAVREVFEGQGQIQGVR 361
Query: 260 -----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
ET K ++EF V +A +AL E+ G +I G+ + ++FS P
Sbjct: 362 LPTDAETGRPKGYGYVEFSSVDEARQALNELQGTDIGGRAIRLDFSTP 409
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD+ V+ L+++F +G + ++ P+ K F++F D A +AL+ +N
Sbjct: 15 NNTTIFVGNLDANVTDEHLRQVFGQYGELVHVK-IPVGKRCGFVQFADRNCAEEALRVLN 73
Query: 287 GQEIYGKHVVIEFSR 301
G +I G+++ + + R
Sbjct: 74 GTQIGGQNIRLSWGR 88
>gi|384486776|gb|EIE78956.1| hypothetical protein RO3G_03661 [Rhizopus delemar RA 99-880]
Length = 140
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ + NLD ++S L E+F++FG + R +T L K F+ F + DA +AL EM
Sbjct: 10 LYIKNLDRDITSKILFELFRSFGEIISARVMKDTQTGLSKGYGFVSFRQMEDAYEALMEM 69
Query: 286 NGQEIYGKHVVIEF 299
NG + KH+ + F
Sbjct: 70 NGSRLRTKHISVSF 83
>gi|358055148|dbj|GAA98917.1| hypothetical protein E5Q_05605 [Mixia osmundae IAM 14324]
Length = 559
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 205 VAGRPVWAQFIVPT----CNAVPDGNNQGTI--VVFNLDSGVSSSTLKEIFQAFGPVKEL 258
+ GRP+ F VP A +NQGT+ V + + L ++F FG ++++
Sbjct: 293 LQGRPIDVHFGVPRDEDRKKACQRDDNQGTLFLTVTGAQQPIDDAALGQMFGQFGDLRDI 352
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
+ HQRFIE++D R A A ++ G + ++++
Sbjct: 353 LPSGANPHQRFIEYFDARGAETAFDKLKDTPFLGGTLDLKYA 394
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V ++ ++++F+ FG ++ + K+ F+ +YD+R A A + + G +
Sbjct: 233 TLFVRSVKYDTKPQDIRDMFERFGEIRSFYDIIGKRGMAFVSYYDLRAAQMAKERLQGTQ 292
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQT 329
+ G+ + + F P +K +C N T++ T
Sbjct: 293 LQGRPIDVHFGVPRDEDRK------KACQRDDNQGTLFLT 326
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V L G + +LKE F +FG V E R ET + F+EF + DA KA M
Sbjct: 39 LFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSM 98
Query: 286 NGQEIYGKHVVIEFS 300
+GQE+ G+ V + F+
Sbjct: 99 DGQELDGRSVRVNFA 113
>gi|25012246|gb|AAN71237.1| LD22171p, partial [Drosophila melanogaster]
Length = 187
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 3 VYVGGLPYGVRERDLERFFKGYG---RTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 59
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 60 LGERVVVEPAR 70
>gi|47230069|emb|CAG10483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 621
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL S V+ L++ F FG ++ +++ K FI F + A KAL ++NG++
Sbjct: 422 VLFVRNLASSVTEELLEKAFSQFGKLERVKKL---KDYAFIHFEERDGAVKALADLNGKD 478
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPP 337
+ G+H+ I F++P +K A + + + Y Y PPP
Sbjct: 479 LEGEHIEIVFAKPPDQKRKERKAQRQAAKTHM-YDEYYYYGPPHMPPP 525
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L V L+ F+ FG ++RE LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFG---KIREVLLKNGFGFVEFDDYRDADDAVYELNGREL 60
Query: 291 YGKHVVIEFS 300
G+ VV+E +
Sbjct: 61 DGERVVVELA 70
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+HV++E +R
Sbjct: 61 CGEHVIVEHAR 71
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+HV++E +R
Sbjct: 61 CGEHVIVEHAR 71
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G V+ D + L+ F+ +G R+ +K F+EF D RDA A+ E+NG+
Sbjct: 37 GFAFVYGRDKSLCQRDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 93
Query: 289 EIYGKHVVIEFSR--PGGHSKKFFYANS 314
E+ G+ + +E +R P G S ++ Y +S
Sbjct: 94 ELLGERITVERARGTPRG-SDQWRYGDS 120
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G +RE LK+ FIEF D RDA +A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLEYLFGRYG---RIREVELKRDYAFIEFSDPRDADEARYNLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRILVEFAK 80
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 210 VWAQFIVPTC-NAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPL 263
+W Q+ P+ NA D Q T+ + L + L+ +AFG VKE++ +T L
Sbjct: 101 LWEQYSPPSEPNATSDA--QKTLFIARLKPETTQLKLQAELEAFGKVKEIKLPISQKTGL 158
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNY 323
K F+EF RD +AL+ + G+ I G V+++ + + K + + +
Sbjct: 159 PKGYAFVEFQKERDMREALRALEGKRIDGARVIVDVEK--ARTTKNWLPKKLRTETVEDR 216
Query: 324 STIYQTRNSDCPPP 337
T + PPP
Sbjct: 217 DTKADKMKTVSPPP 230
>gi|67471417|ref|XP_651660.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56468428|gb|EAL46274.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709320|gb|EMD48605.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 379
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ + ++K++F+ +G +K++ + FI FYD+RDA KA +E+N +EI
Sbjct: 28 LFVRNICFNTNEESIKKLFEKYGEIKKVFCQIENRGIAFITFYDIRDAIKAHEELNKKEI 87
Query: 291 YGKHVVIEFSRPGG 304
G+ + I +S P
Sbjct: 88 GGRPIKIHYSLPKD 101
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 202 RGLVAGRPVWAQFIVPTCNAVPDGNNQGT-----IVVFNLDSGVSSSTLKEIFQAFGPVK 256
+ + GRP+ + +P N + + ++ +++ ++ + F+ FG V
Sbjct: 84 KKEIGGRPIKIHYSLPKDNEINNMDSLKNHANLYVILRGFQKIPTNDEIFHYFEKFGEVS 143
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
E+R++ K +FIE+YD R A KAL+ N
Sbjct: 144 EVRDSADKITIKFIEYYDSRAAVKALESSNN 174
>gi|348518315|ref|XP_003446677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Oreochromis niloticus]
Length = 629
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL +GV+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNLVTVEWADPIEDPDPEVMAKVKVLFVRNLANGVTEELLEKSFSEFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F + A KAL+EMNG+E+ G+ + I F++P +K
Sbjct: 364 LERVKKL---KDYAFIHFEERDGAVKALEEMNGKELEGEPIEIVFAKPPDQKRK 414
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD+ V+ L+++F +G + ++ P+ K F++F D A +AL+ +N
Sbjct: 263 NNTTIFVGNLDANVTDEHLRQVFGQYGELVHVK-IPVGKRCGFVQFADRNCAEEALRVLN 321
Query: 287 GQEIYGKHVVIEFSR 301
G +I G+++ + + R
Sbjct: 322 GTQIGGQNIRLSWGR 336
>gi|380011709|ref|XP_003689940.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q-like [Apis florea]
Length = 667
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 305 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGN 364
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K F+ F + +A KA+ E+NG+EI G H+ + ++P KK
Sbjct: 365 IERVKKI---KDYAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKK---KEE 418
Query: 315 SSCASSLNYSTIYQTRNSDCPPPP 338
A ++Q R+ P P
Sbjct: 419 MLRARERRMMQMFQGRSGGSPSHP 442
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L+ V L+ F+ FG ++E+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFGRIREI---SIKNGFGFVEFDDHRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSS 316
G V +E +R ++ + ++S
Sbjct: 62 LGDRVSVELARGIRRGADYYRSRAAS 87
>gi|407041791|gb|EKE40955.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 379
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ + ++K++F+ +G +K++ + FI FYD+RDA KA +E+N +EI
Sbjct: 28 LFVRNICFNTNEESIKKLFEKYGEIKKVFCQIENRGIAFITFYDIRDAIKAHEELNKKEI 87
Query: 291 YGKHVVIEFSRPGG 304
G+ + I +S P
Sbjct: 88 GGRPIKIHYSLPKD 101
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 202 RGLVAGRPVWAQFIVPT---CNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVK 256
+ + GRP+ + +P N + N + V ++ + F+ FG V
Sbjct: 84 KKEIGGRPIKIHYSLPKDNEINKIDSLENHANLYVILRGFQKIPTNDEIFHYFEKFGEVS 143
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
E+R++ K +FIE+YD R A KAL+ N
Sbjct: 144 EVRDSADKITIKFIEYYDSRAAVKALESSNN 174
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L++ F+ FG ++++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIE 298
G+ VV+E
Sbjct: 63 LGERVVVE 70
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EF++ R AA +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G++I GK V + ++ KK ANSSS S+L + D P + D
Sbjct: 68 GRKILGKEVKVNWATTPSSQKK--DANSSSVVSTLRSQDHFHVFVGDLSPEISTDD 121
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + SG+S +++ F FG + E+R P K + F+ F AA A+ +NG
Sbjct: 215 TVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGY-SFVRFSSHESAAHAIVSVNGTT 273
Query: 290 IYGKHVV 296
I G HVV
Sbjct: 274 IEG-HVV 279
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
V S +++ + +G + R+ LK+ F+EF D RDA A+ ++NG+++ G+ VV+EF
Sbjct: 13 VRESDVEKFLRGYGKI---RDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEF 69
Query: 300 SR-----PGGHSKKFF 310
S+ GG ++ F
Sbjct: 70 SKGRRSEGGGRDRRDF 85
>gi|328767785|gb|EGF77833.1| hypothetical protein BATDEDRAFT_27110 [Batrachochytrium
dendrobatidis JAM81]
Length = 1007
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 212 AQFIVPTCN--AVPDGNNQGTIVVFNLDSGVSSS-----TLKEIFQAFGPVKELRETPLK 264
AQ + P+ + P NQG + + SG++++ TL+ F AFGPV + E P
Sbjct: 550 AQLLAPSAHPEVWPMLLNQGRLHI----SGMATAWYDLPTLRSFFAAFGPVLYITEQPFH 605
Query: 265 KH----QRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF--------FYA 312
K+ F+EF +V DAA A++ + ++G +V +F+R K
Sbjct: 606 KNNPSFSCFVEFDNVDDAATAVRNLGCTNLHGSDIVAKFTRSFEEEKHLAKWCMPISTTV 665
Query: 313 NSSSCASSLNYSTIYQTRNSDCPP 336
NS+ S LN S+ +Q N P
Sbjct: 666 NSALYPSPLNLSSGFQVSNHTTAP 689
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EF++ R AA +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G++I GK V + ++ KK ANSSS S+L + D P + D
Sbjct: 68 GRKILGKEVKVNWATTPSSQKK--DANSSSVVSTLRSQDHFHVFVGDLSPEISTDD 121
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + SG+S +++ F FG + E+R P K + F+ F AA A+ +NG
Sbjct: 215 TVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGY-SFVRFSSHESAAHAIVSVNGTT 273
Query: 290 IYGKHVV 296
I G HVV
Sbjct: 274 IEG-HVV 279
>gi|328789990|ref|XP_392307.4| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Apis
mellifera]
Length = 664
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 305 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGN 364
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K F+ F + +A KA+ E+NG+EI G H+ + ++P KK
Sbjct: 365 IERVKKI---KDYAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKK---KEE 418
Query: 315 SSCASSLNYSTIYQTRNSDCPPPP 338
A ++Q R+ P P
Sbjct: 419 MLRARERRMMQMFQGRSGGSPSHP 442
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
+N+G + V L L+ +F +G + RE LK F+EF D RDA A E+
Sbjct: 4 SNEGRLYVGRLSHRTRERDLERLFSPYGRI---REILLKSGFAFVEFEDTRDAEDACYEL 60
Query: 286 NGQEIYGKHVVIEFSR 301
NG+++ G +V+E ++
Sbjct: 61 NGKDLLGDRIVVEMAK 76
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 78
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 79 LNGRKIFDTEIRVNWAYQGQQNKE 102
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQT 73
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 74 LNGRKIFDTEIRVNWAYQGQQNKE 97
>gi|350409228|ref|XP_003488661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Bombus
impatiens]
Length = 664
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 305 RRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGN 364
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K F+ F + +A KA+ E+NG+EI G H+ + ++P KK
Sbjct: 365 IERVKKI---KDYAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKK---KEE 418
Query: 315 SSCASSLNYSTIYQTRNSDCPPPP 338
A ++Q R+ P P
Sbjct: 419 MLRARERRMMQMFQGRSGGSPSHP 442
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S ++E F+ FG +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKFNTSPSMVREKFKKFGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAEEALK 71
Query: 284 EMNGQEIYGKHVVIEFSRPG 303
EMNG EI G + + ++ G
Sbjct: 72 EMNGSEIDGNRIEVFVAQKG 91
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR-----PGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G+ VV+E +R P G+ ++ Y Y + +RNS PPL +
Sbjct: 63 LGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKS--NSRNSSRYGPPLRTE 117
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G +RE LK+ FIE+ D RDA +A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLEYLFSKYG---RIREVELKRDYAFIEYSDPRDADEARYNLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L+ V L+ F+ FG +RE +K F+EF D RDA A+ E+NG+++
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFG---RIREISIKNGFGFVEFDDPRDADDAVYELNGKDL 61
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASS 320
G V +E +R G + Y S S A S
Sbjct: 62 MGDRVSVELAR--GIRRGADYYRSRSTAPS 89
>gi|167379859|ref|XP_001735309.1| polyadenylate-binding protein, cytoplasmic and nuclear [Entamoeba
dispar SAW760]
gi|165902764|gb|EDR28498.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba dispar SAW760]
Length = 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ + +++++F+ +G +K++ + F+ FYD+RDA KA +E+N +EI
Sbjct: 28 LFVRNISFNANEESIRKLFEKYGEIKKVFCQIENRGIAFVTFYDIRDAIKAHEELNKKEI 87
Query: 291 YGKHVVIEFSRPGGH 305
G+ + I +S P +
Sbjct: 88 DGRPIKIHYSLPKDN 102
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 202 RGLVAGRPVWAQFIVPTCNAVPDGN---NQGTIVVF--NLDSGVSSSTLKEIFQAFGPVK 256
+ + GRP+ + +P N + + N + V ++ + F+ FG V
Sbjct: 84 KKEIDGRPIKIHYSLPKDNEINKTDSLENHANLYVILRGFQKIPTNDEIFHYFEKFGEVS 143
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
E+R++ K + +FIE+YD R A KAL+ N
Sbjct: 144 EIRDSADKPNIKFIEYYDSRAAVKALESSNN 174
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 75 LNGRKIFDTEIRVNWAYQGSTAKE 98
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S ++E F+ FG +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 284 EMNGQEIYGKHVVIEFSRPG 303
EMNG EI G + + ++ G
Sbjct: 72 EMNGSEIDGNRIEVFVAQKG 91
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 76 LNGRKIFDTEIRVNWAYQGQQNKE 99
>gi|340728522|ref|XP_003402571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Bombus terrestris]
Length = 140
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL S LKE F+ +G ++ +++ K F+ F + +A KA+ E+NG+E
Sbjct: 6 VLYVKNLTQDCSEEKLKESFEQYGNIERVKKI---KDYAFVHFEERDNAVKAMNELNGKE 62
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPP 338
I G H+ + ++P KK A ++Q R+ P P
Sbjct: 63 IGGSHIEVSLAKPPSDKKK---KEEMLRARERRMMQMFQGRSGGSPSHP 108
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ L E+F A GP++ + +K F+++YD R AA ++ +NG+
Sbjct: 80 SVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKSSYGFVDYYDHRSAANSILHLNGK 139
Query: 289 EIYGKHVVIEFSRPGGH 305
+IYG+ + + ++ G
Sbjct: 140 QIYGQAIKVNWAYASGQ 156
>gi|430812050|emb|CCJ30505.1| unnamed protein product [Pneumocystis jirovecii]
Length = 628
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 32 YYPYGAASPPTLPPYPSNDVQVVPFGG----VGYAQYPTHPQLGVPLPPPSTGPTRTLVL 87
+ + ASP TL Y ++ + F G +G+ + P+ V L +G TR + L
Sbjct: 168 FISFLDASPATLF-YEEAIIKKLSFHGKEAKIGWGK-PSSVSSTVMLAVQQSGATRNVYL 225
Query: 88 SYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQ 147
+P +++E +R DL FG + +++ + +GI VHF ++ +A A +++ +H
Sbjct: 226 GNLPENITEEEIREDLSKFGTIDQIKIIK-NKGIGFVHFLNISNAMKAVQQLPMEHKWSN 284
Query: 148 QQ-SYG---LKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMN--SYAPV--LPP 199
++ SYG P+ + + NN+ T +Q+ + +L+I N SY +
Sbjct: 285 RKISYGKDRCAQPFKQQHTVSQDPILLNNINTNQLTSQMASMNLIIPNYPSYQDLGHSST 344
Query: 200 PARGLVAGRPVWAQFIVP------TCNAVPDG 225
++ +V R V+ I P CNAV G
Sbjct: 345 NSQSIVGNRTVYLGNIHPETTVEEICNAVRGG 376
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L V L++ F+ +G +KE+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VFVGGLTYRVRERDLEKFFRKYGRIKEV---AMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 62 LGERITVERARGTPRG-SDQWRYGDS 86
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S L+ +F +G +RE LK+ FIEF D RDA +A +++G+++
Sbjct: 13 LYVGRLAPRTRSRDLEYLFGRYG---RIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 291 YGKHVVIEFSR-----PGG 304
G +V+EF++ PGG
Sbjct: 70 DGSRIVVEFAKGVPRGPGG 88
>gi|393213285|gb|EJC98782.1| hypothetical protein FOMMEDRAFT_136953 [Fomitiporia mediterranea
MF3/22]
Length = 635
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 205 VAGRPVWAQFIVPTCNAV----PDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKEL 258
++GRP+ + +P + V P NQGT++V + S + + ++ FQ FG VK +
Sbjct: 220 ISGRPIDVHYSLPRPDEVNSKDPKDRNQGTLLVTLRSSSSPIDDNEVRRRFQQFGDVKSV 279
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
R +R++E++D R A M+ Q + +++S
Sbjct: 280 RVGDNMHSERYVEYFDTRSCEDAYDRMHDQPFQDGILEVQYS 321
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ +S ++ IF+ G +K + + F+ +YD+R A +A + + +
Sbjct: 160 TLFIRNIKYETNSDDVRAIFEEHGEIKTFFDLIANRGMVFVTYYDLRAAERARERLQDTD 219
Query: 290 IYGKHVVIEFSRP 302
I G+ + + +S P
Sbjct: 220 ISGRPIDVHYSLP 232
>gi|449018009|dbj|BAM81411.1| similar to splicing factor RSp31 [Cyanidioschyzon merolae strain
10D]
Length = 301
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLD-SGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
T+ V N D ++S L F FGP++ + +KH FIEF + DA +A EM+G
Sbjct: 141 TLFVVNFDPDEITSRDLLIHFHRFGPIERIER---RKHFAFIEFRSLDDAIRARSEMDGA 197
Query: 289 EIYGKHVVIEFSRPG 303
I + V +EFS+ G
Sbjct: 198 YIGCRQVSVEFSQKG 212
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG+ I+ + + ++ G +K+
Sbjct: 78 LNGRRIFDTEIRVNWAYQGQQNKE 101
>gi|291222526|ref|XP_002731265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Saccoglossus kowalevskii]
Length = 648
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 202 RGLVAGR-PVWAQFIVPTCNA----VPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFG 253
R L++GR VW V A PD + V NL LKE FQAFG
Sbjct: 316 RRLMSGRIKVWGNSNVTVDWADPQEEPDEETMAKVKVLYVRNLTPDAEEEKLKEAFQAFG 375
Query: 254 PVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
V+ +++ K F+ F + A KA++E+NG+E+ G V I ++P +KK
Sbjct: 376 TVERVKKL---KDYCFVHFEERDAAVKAMEELNGKEVEGSVVDISLAKPPSENKK 427
>gi|28175406|gb|AAH45210.1| MGC52864 protein [Xenopus laevis]
Length = 460
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I V N+D + + E+F+ +G V + K F+ +A KA++++NG+E+
Sbjct: 3 IFVGNVDDRTTQEEITELFERYGTVVNC---AVMKQYAFVHMRGAEEATKAVEDLNGREL 59
Query: 291 YGKHVVIEFSRPG-GHSKKFFYAN-SSSCASS 320
GK +++E S+P ++ K F N SSSC S
Sbjct: 60 NGKKMLVELSKPRPQNTWKIFVGNVSSSCEGS 91
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
P N I V N+ S S +++IF+ +G V E + K F+ +A A+
Sbjct: 71 PRPQNTWKIFVGNVSSSCEGSEIRKIFEEYGRVVEC---DIVKDYAFVHMTRESEARAAI 127
Query: 283 KEMNGQEIYGKHVVIEFS 300
+ +NG+EI GK + +E S
Sbjct: 128 EALNGKEIKGKRINVEMS 145
>gi|118794756|ref|XP_321714.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|347965857|ref|XP_003435823.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|347965859|ref|XP_003435824.1| AGAP001419-PD [Anopheles gambiae str. PEST]
gi|116116446|gb|EAA43192.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|333470321|gb|EGK97588.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|333470323|gb|EGK97590.1| AGAP001419-PD [Anopheles gambiae str. PEST]
Length = 532
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL S LKE F+ FG V+ +++ K F+ F D +A KA+K+++G+E
Sbjct: 345 VLYVRNLTQDTSEEKLKESFEQFGRVERVKKI---KDYAFVHFEDRDNAVKAMKDLDGKE 401
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G ++ + ++P KK
Sbjct: 402 VGGSNIEVSLAKPPSDKKK 420
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLDS V+ L+E+F +G + ++ P K F++F D A +AL+ +N
Sbjct: 288 NNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVK-IPAGKRCGFVQFADRSCAEEALRLLN 346
Query: 287 GQEIYGKHVVIEFSR 301
G + G+ + + + R
Sbjct: 347 GTSLSGQSIRLSWGR 361
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L ++F +G V R+ +K+ F+EF D RDA A +NG+++
Sbjct: 13 LYVGRLSSRTRSRDLDDLFSRYGRV---RDVDMKRDYAFVEFSDPRDADDARYSLNGRDV 69
Query: 291 YGKHVVIEFSR-----PGG 304
+G +++E ++ PGG
Sbjct: 70 HGSRIIVEIAKGVPRGPGG 88
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + + ++F GP K + +T F+EFY+ R AA AL MN
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMN 67
Query: 287 GQEIYGKHVVIEFSRPGGHSKK 308
G++I GK V + ++ KK
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKK 89
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NQ + + N+ +++ F+ +G +LRE LK F+EF D RDA A+++++
Sbjct: 4 NQYRLYLGNVSDETRERDVEKFFKGYG---KLREIALKNGYGFVEFEDHRDADDAVQDLD 60
Query: 287 GQEIYGKHVVIEFSR 301
G+++ G V +EF+R
Sbjct: 61 GKDMNGSRVRVEFAR 75
>gi|167386187|ref|XP_001737654.1| splicing factor, arginine/serine-rich [Entamoeba dispar SAW760]
gi|165899464|gb|EDR26052.1| splicing factor, arginine/serine-rich, putative [Entamoeba dispar
SAW760]
Length = 199
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK----KHQRFIEFYDVRDAAKAL 282
N+ + V NL LKE F + G +K R K K F+ F D A KA+
Sbjct: 2 NRLEVYVGNLSLSTDKDKLKEAFVSVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
EMNG+EI G VV++ SRP ++ Y +S
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSS 93
>gi|2564280|emb|CAA75403.1| RNA-binding protein [Mus musculus]
Length = 380
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N G I + L+ TL+EIF FGPV + RET + F+ F + DA
Sbjct: 5 NQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKN 64
Query: 281 ALKEMNGQEIYGKHVVIEFSR 301
A+KEMNG + GK + ++ +R
Sbjct: 65 AVKEMNGVILDGKRIKVKQAR 85
>gi|261824019|ref|NP_035383.2| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|261824021|ref|NP_001159856.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Mus
musculus]
gi|395394010|ref|NP_001257442.1| predicted gene, 21677 [Mus musculus]
gi|395394015|ref|NP_001257444.1| predicted gene, 21704 [Mus musculus]
gi|395394017|ref|NP_001257445.1| predicted gene, 21708 [Mus musculus]
gi|341941874|sp|O35698.2|RBY1A_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=Y chromosome RNA recognition motif 1
Length = 380
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N G I + L+ TL+EIF FGPV + RET + F+ F + DA
Sbjct: 5 NQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKN 64
Query: 281 ALKEMNGQEIYGKHVVIEFSR 301
A+KEMNG + GK + ++ +R
Sbjct: 65 AVKEMNGVILDGKRIKVKQAR 85
>gi|334347620|ref|XP_001379260.2| PREDICTED: RNA-binding protein 14 [Monodelphis domestica]
Length = 636
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
GN+ I V N+ + +S L+ +F+ GPV E + K F+ DA A++
Sbjct: 35 SGNSSAFIFVGNVSAACTSQELRSLFERHGPVIECD---VVKDYAFVHMEKEADAKAAIE 91
Query: 284 EMNGQEIYGKHVVIEFSRPG 303
++NG+E+ GK + +E S G
Sbjct: 92 QLNGKEVKGKRINVELSIKG 111
>gi|347965861|ref|XP_003435825.1| AGAP001419-PC [Anopheles gambiae str. PEST]
gi|333470322|gb|EGK97589.1| AGAP001419-PC [Anopheles gambiae str. PEST]
Length = 532
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL S LKE F+ FG V+ +++ K F+ F D +A KA+K+++G+E
Sbjct: 345 VLYVRNLTQDTSEEKLKESFEQFGRVERVKKI---KDYAFVHFEDRDNAVKAMKDLDGKE 401
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G ++ + ++P KK
Sbjct: 402 VGGSNIEVSLAKPPSDKKK 420
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L+ V L+ F+ FG +RE +K F+EF D RDA A+ E+NG+++
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFG---RIREISIKNGFGFVEFDDPRDADDAVYELNGKDL 61
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASS 320
G V +E +R G + Y S S A S
Sbjct: 62 MGDRVSVELAR--GIRRGADYYRSRSTAPS 89
>gi|395394012|ref|NP_001257443.1| predicted gene, 21693 [Mus musculus]
Length = 380
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N G I + L+ TL+EIF FGPV + RET + F+ F + DA
Sbjct: 5 NQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKN 64
Query: 281 ALKEMNGQEIYGKHVVIEFSR 301
A+KEMNG + GK + ++ +R
Sbjct: 65 AVKEMNGVILDGKRIKVKQAR 85
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G +RE LK+ FIE+ D RDA A ++G+++
Sbjct: 13 LYVGRLSSRTRTRDLEYLFSRYG---RIREVELKRDYAFIEYSDPRDADDAQYNLDGRDV 69
Query: 291 YGKHVVIEFSR-----PGGHSKKFF 310
G +++EF++ PGG ++ +
Sbjct: 70 DGSRIIVEFAKGIPRGPGGSREREY 94
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD G++ L+E+F FG + + + + K F+ F +A++AL EMNG+ I
Sbjct: 410 NLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 470 SGKPLYVAFAQRKEERKAMLQAQFS 494
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 75 LNGRKIFDTEIRVNWAYQGQQNKE 98
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 78
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 79 LNGRKIFDTEIRVNWAYQGQQNKE 102
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 76 LNGRKIFDTEIRVNWAYQGQQNKE 99
>gi|1049084|gb|AAA93071.1| SRp55-2 [Homo sapiens]
Length = 135
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+HV++E +R
Sbjct: 61 CGEHVIVEHAR 71
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ ++G+
Sbjct: 78 SVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFGFVDYYDRRSAALAIMSLHGR 137
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 138 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 179
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
T+ V NL S V +++IF +G E+R +K R FI+F D RDA +A++
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYG---EIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 284 EMNGQEIYGKHVVIEF 299
+G E GK + +EF
Sbjct: 62 ARDGYEFDGKRLRVEF 77
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
T+ V NL S V +++IF +G E+R +K R FI+F D RDA +A++
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYG---EIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 284 EMNGQEIYGKHVVIEF 299
+G E GK + +EF
Sbjct: 62 ARDGYEFDGKRLRVEF 77
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
++ V N+ + L + F FG K FIEF D RDA AL E+NG+E
Sbjct: 2 SLFVGNISRSMRQDELHDEFDKFGSC----SINFKGSYAFIEFKDERDAEDALTELNGRE 57
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANS 314
G+ + IE+S+ G +F AN+
Sbjct: 58 FSGQRLAIEWSKKSG---RFDAANA 79
>gi|432944515|ref|XP_004083418.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Oryzias latipes]
Length = 469
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F AFG
Sbjct: 311 RRLMSGKVKVWGILVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEILEKSFSAFGK 370
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KAL EMNG+E+ G+ + I F++P +K A
Sbjct: 371 LERVKKL---KDYAFIHFEEREGAVKALDEMNGKELEGEPIEIVFAKPPDQKRKERKAQR 427
Query: 315 SSCASSL 321
+ + +
Sbjct: 428 QAAKTQI 434
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 216 VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-------- 267
T + VP G++ ++V NL + ++E+F AF ++ +R P K H
Sbjct: 844 AATSSEVPPGSDPQKLIVKNLPFEATERDVRELFSAFSEIRSVR-VPRKSHTFSSHRENN 902
Query: 268 ----RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
F+EF +AA+AL+ + +YG+H+V+++++ G
Sbjct: 903 HRGFAFVEFLSEVEAARALETLKSTHLYGRHLVLQYAKLDG 943
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 73 LNGRKIFDTEIRVNWAYQGQQNKE 96
>gi|403169840|ref|XP_003329260.2| hypothetical protein PGTG_10312 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168444|gb|EFP84841.2| hypothetical protein PGTG_10312 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 698
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 205 VAGRPVWAQFIVPTCNAVPD----GNNQGTIVVFNLDSG--VSSSTLKEIFQAFGPVKEL 258
V+GRP+ + +P N + NQ T+ + D ++ S L+ F+ +G ++ +
Sbjct: 227 VSGRPIDVHYSLPKDNELERRCDRDKNQATLFLSITDGHRPINDSELRNKFETYGEIRSI 286
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
+ +QRF+E++D R A ++G + G + ++FS
Sbjct: 287 KPFKDSPYQRFVEYWDTRACESAHDSLDGSQYLGGTLELKFS 328
>gi|324513496|gb|ADY45545.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 310
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
S+S ++ F+ +G + ++ LK F+EF D RDA A+ E++G+E+ G+ V IEF
Sbjct: 14 ASASDIEWFFRGYGRISDI---VLKNGYAFVEFDDPRDAEDAVYELSGKELCGERVNIEF 70
Query: 300 SRPGGHSKKFFYANSSSCASSLNY 323
+RP ++ Y S S Y
Sbjct: 71 TRPTWRTRIGRYDRYLSSRRSFKY 94
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 79 LNGRKIFDTEIRVNWAYQGNQNKE 102
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 219 CNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE---LRETPLKKHQRF--IEFY 273
+ V +G+ + V NL V TLK +F FG V+ +R+ + F ++F
Sbjct: 21 AHGVSNGSQHSNVYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGFVKFM 80
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFS 300
V A A+KEMNG+ I GK + ++F+
Sbjct: 81 QVHQAEAAIKEMNGKVIRGKVLEVKFA 107
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
T+ V NL S V +++IF +G E+R +K R FI+F D RDA +A++
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYG---EIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 284 EMNGQEIYGKHVVIEF 299
+G E GK + +EF
Sbjct: 62 ACDGYEFDGKRLRVEF 77
>gi|410929393|ref|XP_003978084.1| PREDICTED: uncharacterized protein LOC101079487 [Takifugu rubripes]
Length = 568
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D +N I V NL + L IF+ +G V + + F+ A +A++
Sbjct: 2 DKSNTVKIFVGNLALDTTQEELSAIFEPYGQVVSCS---VLRQFAFVHLQGEGAAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPGG-HSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR HS K F N S ++ + ++QT
Sbjct: 59 ELNGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQQLFQT 105
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EFYD R AA +L MN
Sbjct: 9 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMN 68
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 69 GRKIMGKEVKVNWA 82
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 156 PYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFI 215
P S M+++ N+ YD++ A SL MN + G+ V +
Sbjct: 33 PCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRK----------IMGKEVKVNWA 82
Query: 216 VPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFI 270
+ D +N + V +L +++ +K F FG + + R T K F+
Sbjct: 83 TTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFV 142
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F++ DA A++ M GQ + G+ + ++
Sbjct: 143 SFFNKWDAENAIQHMGGQWLGGRQIRTNWA 172
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
I V +L V S LKE+F+ FG V + RET K FIE D A KA+ E+
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 286 NGQEIYGKHVVI 297
NG E+YG+ +V+
Sbjct: 63 NGAELYGRTIVV 74
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR-----PGGH 305
G+ VV+E +R PGG
Sbjct: 63 LGERVVVEPARGTARGPGGR 82
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ F +G +RE LK+ FIEF D RDA +A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLEYHFSRYG---RIREVELKRDYAFIEFSDPRDAEEARYNLDGRDV 69
Query: 291 YGKHVVIEFSR-----PGG 304
G +++EF++ PGG
Sbjct: 70 DGSRILVEFAKGVPRGPGG 88
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ GPV+ + +K FI++YD R AA A+ +NG+
Sbjct: 76 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 135
Query: 289 EIYGKHVVIEFS 300
++YG+ + + ++
Sbjct: 136 QLYGQPIKVNWA 147
>gi|348518317|ref|XP_003446678.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Oreochromis niloticus]
Length = 594
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL +GV+ L++ F FG ++ +++ K FI F + A KAL+EMNG+E
Sbjct: 304 VLFVRNLANGVTEELLEKSFSEFGKLERVKKL---KDYAFIHFEERDGAVKALEEMNGKE 360
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+ + I F++P +K
Sbjct: 361 LEGEPIEIVFAKPPDQKRK 379
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L V ++ F +G +L E LK F+EF D+RDA A+ E+NG+E+
Sbjct: 4 VYVGKLSYHVREKDIQRFFSGYG---KLLEIDLKNGYGFVEFEDMRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ VVIE +R
Sbjct: 61 CGERVVIEHAR 71
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 68 LNGRKIFDTEIRVNWAYQGSQNKE 91
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR-----PGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSAD 342
G+ VV+E +R P G+ ++ Y Y + +RNS PPL +
Sbjct: 63 LGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKS--NSRNSSRYGPPLRTE 117
>gi|307103831|gb|EFN52088.1| hypothetical protein CHLNCDRAFT_139357 [Chlorella variabilis]
Length = 1038
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 222 VPDGNNQG-TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAK 280
+P G +Q T+ V N+D V L+ +F+AFG V+ L + + +YD R A
Sbjct: 366 LPAGTSQSRTLFVRNVDPSVPEDELRTLFEAFGEVRSLYTAAKARGFVVVSYYDTRAATL 425
Query: 281 ALKEMNGQEIYGKHVVIEFSRP 302
A + GQ + G+ + + FS P
Sbjct: 426 AKHTLTGQMLAGQQLDVHFSLP 447
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
++AG+ + F +P + QGT++V +LD+G S L +F +G ++++ + PL
Sbjct: 434 MLAGQQLDVHFSLPKDDREA---AQGTLLVASLDAGSSRQELLYLFSQYGELRDVADDPL 490
Query: 264 KK-HQRFIEFYDVRDAAKALKEMN 286
+ + +EFYD R AA AL+ ++
Sbjct: 491 GRPNCCLVEFYDTRHAAAALQGIS 514
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%)
Query: 76 PPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P T +RTL + V V E +R E FGEVR + G V V +YD R A +A
Sbjct: 367 PAGTSQSRTLFVRNVDPSVPEDELRTLFEAFGEVRSLYTAAKARGFVVVSYYDTRAATLA 426
Query: 136 FKEIREQHMQLQQ 148
+ Q + QQ
Sbjct: 427 KHTLTGQMLAGQQ 439
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EFYD R AA +L MN
Sbjct: 8 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMN 67
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 68 GRKIMGKEVKVNWA 81
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + SG++ +++ F AFG + E+R P K + F+ F AA A+ +NG
Sbjct: 204 TVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGY-SFVRFNSHESAAHAIVSVNGTS 262
Query: 290 IYGKHVV 296
I G HVV
Sbjct: 263 IDG-HVV 268
>gi|427782345|gb|JAA56624.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 319
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVR 276
GN+Q +++ L G++ + +F + GP+K + + +H+ F+++
Sbjct: 6 GNSQTNLIINYLPQGLTDEEFRSLFTSIGPIKS---SKIVRHKATGYSYGFGFVDYQGAG 62
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
DAA+A++ +NG ++ K + + ++RPGG + K
Sbjct: 63 DAARAVESLNGLQLQNKKIKVAYARPGGETIK 94
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N + V L V L+ FQ G VK++ +K F+EF D RDA A+ E+N
Sbjct: 3 NGTRVFVGGLSHRVRERDLERFFQKIGRVKDI---AMKNGYAFVEFDDYRDADDAVYELN 59
Query: 287 GQEIYGKHVVIEFSR 301
G+E+ G+ V +E +R
Sbjct: 60 GRELNGERVSVERAR 74
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 220 NAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYD 274
+ +P+ +Q ++ V N+ V+ T++ +F GPV + RET K FIEF D
Sbjct: 8 SGLPNERSQRSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPD 67
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ A A++ +NG E+ G+ + ++ + G + ++F N+
Sbjct: 68 IQTADTAIRVLNGHELGGRILRVDSAAGGMNMEEFGQPNA 107
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ F +G +RE LK+ FIEF D RDA +A ++G+++
Sbjct: 21 LYVGRLSSRTRSRDLEYHFSRYG---RIREVELKRDYAFIEFSDPRDAEEARYNLDGRDV 77
Query: 291 YGKHVVIEFSR-----PGG 304
G +++EF++ PGG
Sbjct: 78 DGSRILVEFAKGVPRGPGG 96
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD G+S L+E+F FG + + + + K F+ F +A++A+ EMNG+ +
Sbjct: 325 NLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKML 384
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 385 SGKPLYVAFAQRKEERKAMLQAQFS 409
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 206 AGRPVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGPVKELR 259
A R VW I+ PD + V NL S LKE F+AFG V+ ++
Sbjct: 236 AVREVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDTSEEKLKESFEAFGKVERVK 295
Query: 260 ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
+ K F+ F D A A+K+++G++I G + + ++P KK
Sbjct: 296 KI---KDYAFVHFEDRDHAVNAMKDLDGKDINGSAIEVSLAKPPSDKKK 341
>gi|395394021|ref|NP_001257447.1| predicted gene 4064 [Mus musculus]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALK 283
G I + L+ TL+EIF FGPV + RET + F+ F + DA A+K
Sbjct: 8 GKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVK 67
Query: 284 EMNGQEIYGKHVVIEFSR 301
EMNG + GK + ++ +R
Sbjct: 68 EMNGVILDGKRIKVKQAR 85
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ GPV+ + +K FI++YD R AA A+ +NG+
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 179
Query: 289 EIYGKHVVIEFS 300
++YG+ + + ++
Sbjct: 180 QLYGQPIKVNWA 191
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPGGHS 306
A A+ M+G + G+ + ++ +R GG+
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARCGGYG 96
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ GPV+ + +K FI++YD R AA A+ +NG+
Sbjct: 76 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 135
Query: 289 EIYGKHVVIEFS 300
++YG+ + + ++
Sbjct: 136 QLYGQPIKVNWA 147
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V NL V++S L+++F +FG V+ RET K F+EF D + A+ A+ M
Sbjct: 5 LYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAINAM 64
Query: 286 NGQEIYGKHVVIEFSRP 302
NG+++ G+ + + +RP
Sbjct: 65 NGKDVNGRALTVNEARP 81
>gi|223648358|gb|ACN10937.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 635
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
V G PV ++ P PD + ++ V L + V+ L++ F AFG ++ +++
Sbjct: 319 VWGNPVTVEWADPVAEPDPDVMAKVKVLFVRKLATPVTEELLEKTFSAFGKLERVKKL-- 376
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
K F+ F D A KA+ EMNG+E+ G+ + I ++P +K
Sbjct: 377 -KDYAFVHFEDRDAAVKAMSEMNGKELGGEEIEIVLAKPPDKKRK 420
>gi|395394001|ref|NP_001257439.1| predicted gene 10256 [Mus musculus]
gi|395394006|ref|NP_001257440.1| predicted gene 10352 [Mus musculus]
gi|187956457|gb|AAI50671.1| Rbmy1a1 protein [Mus musculus]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALK 283
G I + L+ TL+EIF FGPV + RET + F+ F + DA A+K
Sbjct: 8 GKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVK 67
Query: 284 EMNGQEIYGKHVVIEFSR 301
EMNG + GK + ++ +R
Sbjct: 68 EMNGVILDGKRIKVKQAR 85
>gi|406602156|emb|CCH46282.1| Spliceosome-associated protein 49 [Wickerhamomyces ciferrii]
Length = 210
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQR--FIEFYDVRD 277
D N T+ V NLD V L E+F P+K + ++ L+ HQ F+EF +V+D
Sbjct: 8 SDRNQDCTVYVGNLDEKVHDGLLYELFIQIAPIKNIHLPKDRILRTHQGYGFVEFKNVKD 67
Query: 278 AAKALKEMNGQEIYGKHV 295
A K MNG ++YGK++
Sbjct: 68 TEYAEKIMNGIKLYGKNL 85
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFG-----PVKELRETPLKKHQRFIEFYDVRDAAKALK 283
T+ + NLD V + L+ IF+ FG PV E KH FI + +D+ A+
Sbjct: 104 ATLFIKNLDDLVDENLLQTIFKQFGVFFKPPVISRDEQGNSKHHGFIYYKTFKDSDNAIA 163
Query: 284 EMNGQEIYGKHVVIEFSRPGGHSK 307
+MN Q I K V I+++ + K
Sbjct: 164 KMNNQMILNKKVQIDYALKKKNGK 187
>gi|326926670|ref|XP_003209521.1| PREDICTED: hypothetical protein LOC100540496 [Meleagris gallopavo]
Length = 304
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQ-AFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V N+ ++ L E+F A GPV + L K F+ D AA+A+ ++NG +
Sbjct: 67 LFVGNVPEEATAEELSELFSGAAGPVLGI---ALMKQFAFVHLRDEAAAARAITQLNGHQ 123
Query: 290 IYGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQ 328
++G+ +V+E SRP ++ K F N S+ +S +++Q
Sbjct: 124 LHGRRIVVEPSRPRPTNTCKIFVGNVSAACTSGELRSLFQ 163
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLDS V+ L+++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 263 NNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK-IPAGKRCGFVQFSDRSCAEEALRILN 321
Query: 287 GQEIYGKHVVIEFSR 301
G I G+++ + + R
Sbjct: 322 GTPIGGQNIRLSWGR 336
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L EIF GPV+ ++ P + +Q F+E+ D+R A AL+
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKK 308
+NG++I+ + + ++ G +K+
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD G++ L+E+F FG + + + + K F+ F +A++AL EMNG+ I
Sbjct: 410 NLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 470 SGKPLYVAFAQRKEERKAMLQAQFS 494
>gi|281201366|gb|EFA75578.1| hypothetical protein PPL_11083 [Polysphondylium pallidum PN500]
Length = 481
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
+ GR + F +P +A + N G I+V N + + + L+ F +G V+++ T K
Sbjct: 291 MGGRTISIHFSIPKEDANGESANSGFILVRN--NNMPAGELRTFFSTYGDVRDV--TNYK 346
Query: 265 KHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
Q +EFYD R KALK G ++ G+ +
Sbjct: 347 NDQHLVEFYDTRACEKALKGGQGLQLSGQQL 377
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ V + +F G +++ + FI ++D+RDA KA E+ G
Sbjct: 231 TLFVRNIAYVVKEDDVISLFAKSGDIRKNFSVIENRGIAFITYFDLRDAEKAKNELQGFN 290
Query: 290 IYGKHVVIEFSRP 302
+ G+ + I FS P
Sbjct: 291 MGGRTISIHFSIP 303
>gi|157865391|ref|XP_001681403.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124699|emb|CAJ02743.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 950
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ--------- 267
+ + VP G++ ++V NL + ++E+F AF ++ +R P K H
Sbjct: 852 ASASRVPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVR-VPRKSHTFSSHRENNH 910
Query: 268 ---RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
F+EF +AA+AL+ + +YG+H+V+++++ G
Sbjct: 911 RGFAFVEFLSEAEAARALETLKATHLYGRHLVLQYAKLDG 950
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G I V L V ++ F+ +G + ++ LK F+EF D RDA A+ E+NG+
Sbjct: 3 GRIYVGRLSYSVRERDIERFFRNYGRIVDV---LLKNGYGFVEFDDYRDADDAVYELNGK 59
Query: 289 EIYGKHVVIEFSR 301
E+ G+ VVIE +R
Sbjct: 60 ELCGERVVIEHAR 72
>gi|260796311|ref|XP_002593148.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|260796325|ref|XP_002593155.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
gi|229278372|gb|EEN49159.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|229278379|gb|EEN49166.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
Length = 88
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE--LRETPLKKHQR---FIEFYDVR 276
+P+ + G I V L+ + +TL+++F +G + E L + + R FI F + R
Sbjct: 1 MPEADTPGKIFVAGLNLETNETTLEKLFNKYGKIVEVLLMKDKITARSRGFGFITFENPR 60
Query: 277 DAAKALKEMNGQEIYGKHVVIE 298
DA A+KEMNGQ+I GK + ++
Sbjct: 61 DAEVAVKEMNGQDIAGKVIKVD 82
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 223 PDGNNQGT-IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
P N GT + + L ++ F+ +G LR+ LK F+EF D RDA A
Sbjct: 235 PMKNRMGTRVYIGRLSHHARERDVERFFKGYG---RLRDVMLKNGYGFVEFEDYRDADDA 291
Query: 282 LKEMNGQEIYGKHVVIEFSRPG 303
+ E+NG+++ G+ V++E +R G
Sbjct: 292 VYELNGKDLAGERVIVEHARGG 313
>gi|242011880|ref|XP_002426671.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
gi|212510842|gb|EEB13933.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
Length = 548
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ +G
Sbjct: 319 RRLGTGRVKVWGCDIIVDWADPQEEPDAETMSKVKVLYVRNLTQDCSEEKLKESFEVYGK 378
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
+ +++ K FI F D +A KAL E+NG+++ G + + ++P KK
Sbjct: 379 IDRVKKI---KDYAFIHFEDRDNAIKALNELNGKDLAGACIEVSLAKPPSDKKK 429
>gi|19113216|ref|NP_596424.1| U1 snRNP-associated protein Usp102 [Schizosaccharomyces pombe
972h-]
gi|74676131|sp|O74968.1|RU1A_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein usp102; Short=U1
snRNP protein usp102
gi|3169094|emb|CAA19287.1| U1 snRNP-associated protein Usp102 [Schizosaccharomyces pombe]
Length = 249
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 63 QYPTHPQLGVPLPPP--STGPTRTLVLSYVPGDVSETIVRRDLE----VFGEVRGVQMER 116
Q +H ++ P P S P+ TL + + + T+++R LE +G+V VQ +
Sbjct: 4 QTNSHQEVQQPSPKETDSQTPSETLYIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARK 63
Query: 117 L--MEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNN--- 171
M G V F +L +A A K++ Q Y L Y +M+ + + ++
Sbjct: 64 TLRMRGQAFVVFDNLENASRALKDL---------QGYPL---YGKPMMIQYSKSKSDIIV 111
Query: 172 ------NLATGCYDNQVVAESLMIMNSYAPVLPPPA-RGLVAGRPVWAQFIVPTCNAVPD 224
+ T D + E L ++ P P P + V R V A+ +
Sbjct: 112 QRESPEEIETRKKDRKNRREMLKRTSALQPAAPKPTHKKPVPKRNVGAERKSTINEDLLP 171
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
N +++ N+ V++ L +IF+AF +E+R P ++ F+E+ R+A A
Sbjct: 172 PNK--VLLLQNIPQEVNADVLTQIFEAFSGFQEVRMVPGRRGIAFVEYDSDREATVAKNG 229
Query: 285 MNGQEIYGKHVVIEFSR 301
G + G + + F+R
Sbjct: 230 TTGMSLSGNQIKVTFAR 246
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S ++E F+ +G +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 284 EMNGQEIYGKHVVI 297
EMNG EI G + +
Sbjct: 72 EMNGSEIDGNRIEV 85
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ +NG+
Sbjct: 78 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAALAIVSLNGR 137
Query: 289 EIYGKHVVIEFS 300
+++G+ + + ++
Sbjct: 138 QLFGQPIKVNWA 149
>gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D +N I V NL + L IF+ +G V + + F+ A +A++
Sbjct: 2 DKSNTVKIFVGNLALDTTQEELSCIFEPYGQVVSCS---VLRQFAFVHLQGEGSAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPGG-HSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR HS K F N S ++ + ++QT
Sbjct: 59 ELNGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQQLFQT 105
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ GPV+ + +K FI++YD R AA A+ +NG+
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 179
Query: 289 EIYGKHVVIEFS 300
++YG+ + + ++
Sbjct: 180 QLYGQPIKVNWA 191
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 236 LDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
L+S V +++ F+ +G +KE+ LK F+EF D RDA A+ ++N +E+ G +
Sbjct: 9 LNSSVRERDVEKFFRDYGKLKEV---TLKGTFGFVEFDDSRDAEDAVYDLNNKELCGDRI 65
Query: 296 VIEFSR 301
++EF+R
Sbjct: 66 IVEFAR 71
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR-----PGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPL 339
G+ VV+E +R P G+ ++ Y Y + +RNS PPL
Sbjct: 63 LGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKS--NSRNSSRYGPPL 114
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N + + N+ +++ F+ +G LRE LK F+EF D RDA A+++++
Sbjct: 4 NHHRLYLGNISDDTRERDVEKFFKGYGK---LREVALKNGYGFVEFEDHRDADDAVQDLD 60
Query: 287 GQEIYGKHVVIEFSR 301
G+++ G V +EF+R
Sbjct: 61 GKDMNGSRVRVEFAR 75
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G V R+ +K+ F+EF D RDA A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGRV---RDVDMKRDYAFVEFSDPRDADDARYNLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRLIVEFAK 80
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L SG S L+E F +GP++ + F+EF DVRDA A++ ++G+ I
Sbjct: 9 VYVGDLGSGASKQELEEAFSYYGPLRNVWVARNPPGFAFVEFEDVRDAEDAVRGLDGRTI 68
Query: 291 YGKHVVIEFS 300
G+ V +E S
Sbjct: 69 CGRRVRVELS 78
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+++F +G V R+ LK FIEF D RDA +A +NG+++
Sbjct: 13 LYVGRLSSRTRTRDLEDLFNRYGRV---RDVDLKHDFAFIEFSDPRDADEARYYLNGRDL 69
Query: 291 YGKHVVIEF 299
G +V+EF
Sbjct: 70 DGSRIVVEF 78
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIE 298
G+ VV+E
Sbjct: 63 LGERVVVE 70
>gi|348531623|ref|XP_003453308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Oreochromis niloticus]
Length = 535
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL S V+ L++ F G
Sbjct: 303 RRLMSGKVKVWGNLVTVEWADPIEDPDPEVMAKVKVLFVRNLASTVTEEILEKTFSQHGK 362
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KAL ++NG+++ G+H+ I F++P +K A
Sbjct: 363 LERVKKL---KDYAFIHFEERESAVKALTDLNGKDLEGEHIEIVFAKPPDQKRKERKAQR 419
Query: 315 SSCASSL 321
+ + +
Sbjct: 420 QAAKTQM 426
>gi|255577189|ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
gi|223531035|gb|EEF32887.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
Length = 902
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L+ G PV +F P A P N + V + VS L+E F FG ++E +
Sbjct: 81 LLRGNPVKIEFARP---AKPSKN----LWVGGISPAVSKEQLEEEFLKFGKIEEFKFL-R 132
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ FIE+ + DA +A++ MNG+ + G + ++F R
Sbjct: 133 DRNTAFIEYVKLEDALEAMRSMNGKRLGGDQIRVDFLR 170
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL V+ S L ++F +G + + T + F+ F V DAA A + G +
Sbjct: 24 LWVGNLAPDVTDSDLMDLFAKYGALDSV-TTYSSRSYAFLYFKHVEDAAAAKDALQGTLL 82
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCAS 319
G V IEF+RP SK + S S
Sbjct: 83 RGNPVKIEFARPAKPSKNLWVGGISPAVS 111
>gi|328852521|gb|EGG01666.1| hypothetical protein MELLADRAFT_78947 [Melampsora larici-populina
98AG31]
Length = 712
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 205 VAGRPVWAQFIVPTCNAVPD----GNNQGTI--VVFNLDSGVSSSTLKEIFQAFGPVKEL 258
V+GRP+ + +P N + NQ T+ + + + L + F +G ++ +
Sbjct: 185 VSGRPIDVHYSLPKDNELERRCDRDKNQATLFLAISGANRAIDDGELNDKFSVYGEIRSI 244
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
+ +QRFIEF+D R A ++ G + G + ++FS
Sbjct: 245 KHFKDSPYQRFIEFWDSRACEAAHDDLVGSQYLGGKLDLKFS 286
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ + ++E F G +K + + FI +YDVR A A +++ G E
Sbjct: 125 TLFVRNVKYETNPMEVREKFDQMGEIKTFFDLISNRGMVFITYYDVRAATMAKEQLQGSE 184
Query: 290 IYGKHVVIEFSRP 302
+ G+ + + +S P
Sbjct: 185 VSGRPIDVHYSLP 197
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYG---RTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|67619324|ref|XP_667641.1| U1 snrnp [Cryptosporidium hominis TU502]
gi|54658786|gb|EAL37403.1| U1 snrnp [Cryptosporidium hominis]
Length = 267
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 220 NAVPDGNNQGTIVVFNLDSGVS----SSTLKEIFQAFGPVKELR--ETPLKKHQRFIEFY 273
N++ D + TI V NL+ +S L+EIF +G ++ ++ + +K Q +I F
Sbjct: 17 NSLSDDDENKTIYVNNLNDSISIPKQKLALEEIFAKYGKIESIKMFNSYFRKGQAWITFS 76
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
+ A A+ G +I+GKHV + F+ + NSSS
Sbjct: 77 NAVSAVNAVNNEIGTQIFGKHVNVSFAAEESEHRNIHIRNSSS 119
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 218 TCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ---------- 267
+ + VP G++ ++V NL + ++E+F AF ++ +R P K H
Sbjct: 722 SVSKVPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVR-VPRKSHAFSSHRENNHR 780
Query: 268 --RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
F+EF +AA+AL+ + +YG+H+V+++++ G
Sbjct: 781 GFAFVEFLSEAEAARALETLKATHLYGRHLVLQYAKLDG 819
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 116 LGERITVERARGTPRG-SDQWRYGDS 140
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+++F +G V R+ LK FIEF D RDA +A +NG+++
Sbjct: 13 LYVGRLSSRTRTRDLEDLFNRYGRV---RDVDLKHDFAFIEFSDPRDADEARYYLNGRDL 69
Query: 291 YGKHVVIEF 299
G +V+EF
Sbjct: 70 DGSRIVVEF 78
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD G++ L+E+F FG + + + + K F+ F +A++AL EMNG+ I
Sbjct: 211 NLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMI 270
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 271 SGKPLYVAFAQRKEDRKAMLQAQFS 295
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S L+ +F +G +RE LK+ FIEF D RDA A ++G+E+
Sbjct: 13 LYVGRLAPRTRSRDLEYLFSKYG---RIREVELKRDYAFIEFSDPRDADDAQYNLDGREV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|336389988|gb|EGO31131.1| hypothetical protein SERLADRAFT_444710 [Serpula lacrymans var.
lacrymans S7.9]
Length = 341
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNN---QGTIVVF--NLDSG--VSSSTLKEIFQAFGPVKE 257
++GRP+ + +P + G+ QGT++V N SG + + ++ FQ FG VK
Sbjct: 224 ISGRPIDVHYSLPRDDQRQGGDKNQLQGTVIVTLRNSPSGQPIDDNEVRRKFQQFGDVKS 283
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
+R + QR++EFYD+R ++ + Q
Sbjct: 284 VRPIGDRGDQRYVEFYDIRACEESYDRLRHQ 314
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ +S ++ F+ G +K + + F+ +YD+R A +A + G E
Sbjct: 164 TLFIRNIKYETNSEDVRHSFEEHGEIKTFFDLISTRGMVFVTYYDLRAAERARDRLQGSE 223
Query: 290 IYGKHVVIEFSRP 302
I G+ + + +S P
Sbjct: 224 ISGRPIDVHYSLP 236
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 214 FIVPTCNAVP---DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
++ P + +P D + + V L S S L+++F +G V R+ +K F+
Sbjct: 25 YLPPLSDKMPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRV---RDVDMKHDFAFV 81
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
EF D RDA A +NG++ G +++EF++
Sbjct: 82 EFSDPRDADDARYSLNGRDFDGSRIIVEFAK 112
>gi|224613218|gb|ACN60188.1| Heterogeneous nuclear ribonucleoprotein Q [Salmo salar]
Length = 583
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KAL EMNG++
Sbjct: 294 VLFVRNLANSVTEEILEKSFGQFGRLERVKKL---KDYAFIHFDERDSAVKALAEMNGKD 350
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+H+ I F++P +K
Sbjct: 351 LEGEHIDIVFAKPPDQKRK 369
>gi|363746191|ref|XP_003643562.1| PREDICTED: RNA-binding protein 14-like, partial [Gallus gallus]
Length = 144
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAF-GPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V N+ ++ L E+F GPV + L K F+ D AA+A+ ++NG +
Sbjct: 36 LFVGNVPEEATAEELSELFSGVAGPVLGI---ALMKQFAFVHLRDEAAAARAITQLNGHQ 92
Query: 290 IYGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQ 328
++G+ +V+E SRP ++ K F N S+ +S +++Q
Sbjct: 93 LHGRRIVVEPSRPRPTNTCKIFVGNVSAACTSGELRSLFQ 132
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L + S L+ +F +G +RE LK+ FIEF D RDA +A +++G+++
Sbjct: 13 LYVGRLATRTRSRDLEHLFGRYG---RIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +V+E ++
Sbjct: 70 DGSRIVVESAK 80
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ LK++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 272 NNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVK-IPSGKRCGFVQFADRSSAEEALRVLN 330
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSADPPSY 346
G + G++V + + R + + N + +SS + Q + PP DP Y
Sbjct: 331 GTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSY-FGGYAQGYENYAYAPPAGQDPNMY 389
Query: 347 S--PRSFAS 353
P +AS
Sbjct: 390 GSYPAGYAS 398
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ LK++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 272 NNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVK-IPSGKRCGFVQFADRSSAEEALRVLN 330
Query: 287 GQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSADPPSY 346
G + G++V + + R + + N + +SS + Q + PP DP Y
Sbjct: 331 GTLLGGQNVRLSWGRSPANKQTQQDPNQWNGSSSY-FGGYAQGYENYAYAPPAGQDPNMY 389
Query: 347 S--PRSFAS 353
P +AS
Sbjct: 390 GSYPAGYAS 398
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 94
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 95 CGERVIVEHAR 105
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G V R+ +K F+EF D RDA A ++G++I
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGSV---RDVDMKHDYAFVEFRDPRDADDARYNLDGRDI 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRLIVEFAK 80
>gi|336376940|gb|EGO05275.1| hypothetical protein SERLA73DRAFT_164833 [Serpula lacrymans var.
lacrymans S7.3]
Length = 375
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNN---QGTIVVF--NLDSG--VSSSTLKEIFQAFGPVKE 257
++GRP+ + +P + G+ QGT++V N SG + + ++ FQ FG VK
Sbjct: 224 ISGRPIDVHYSLPRDDQRQGGDKNQLQGTVIVTLRNSPSGQPIDDNEVRRKFQQFGDVKS 283
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
+R + QR++EFYD+R ++ + Q
Sbjct: 284 VRPIGDRGDQRYVEFYDIRACEESYDRLRHQ 314
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ +S ++ F+ G +K + + F+ +YD+R A +A + G E
Sbjct: 164 TLFIRNIKYETNSEDVRHSFEEHGEIKTFFDLISTRGMVFVTYYDLRAAERARDRLQGSE 223
Query: 290 IYGKHVVIEFSRP 302
I G+ + + +S P
Sbjct: 224 ISGRPIDVHYSLP 236
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 199 PPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL 258
PP R + GRP PD ++ V NL S TL+ +F+ +G V ++
Sbjct: 62 PPLRAMSYGRPP------------PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDV 109
Query: 259 -----RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
R T + F+ F+D RDA A+ M+G + G+ + ++ +R G
Sbjct: 110 YIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 159
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S L+ +F +G +RE LK+ FIEF D RDA A ++G+++
Sbjct: 13 LYVGRLSPRTRSRDLEYLFSKYG---RIREVELKRDYAFIEFSDPRDADDAQYNLDGRDV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|90075970|dbj|BAE87665.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE- 289
+ V L LK+ F FG +K+L LK + FI++ + DA AL+EMNG+
Sbjct: 96 VYVAGLHRRTREDDLKDSFSKFGRIKQL---VLKHNYAFIDYENHEDAVAALREMNGKTF 152
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+ + +E S PGG +K
Sbjct: 153 VNGEELAVEQSVPGGKKRK 171
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V NL L+E FQ +GP+ ++ P + FI F A +A+ EMNG E
Sbjct: 216 TVYVGNLSPNTDEKILREFFQGYGPITSVK-IPTNSNCGFINFTRTEHAERAIIEMNGIE 274
Query: 290 IYGKHVVIEFSRPGGHSKK 308
I G V + + R H+KK
Sbjct: 275 IQGNRVRVSWGRV-QHNKK 292
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAA 279
G N+ I V NL + + ++++F FG V K R P F+EF D RDA
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDAD 59
Query: 280 KALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASS 320
A+K +G + G + +EF R GG + Y++SS +S
Sbjct: 60 DAVKARDGYDYDGYRLRVEFPRGGGPGR---YSSSSRGGNS 97
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V LDS VS LK+ F FG V ++ P+ K F++F + ++A A++ +N
Sbjct: 308 NNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVK-IPIGKGCGFVQFANRKNAEDAIQGLN 366
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G I + V + + R G+ +
Sbjct: 367 GTVIGKQTVRLSWGRSTGNKQ 387
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S L+ +F +G +RE LK+ FIEF + RDA +A +++G+++
Sbjct: 13 LYVGRLAPRTRSRDLEYLFGKYG---RIREVELKRDYAFIEFSEHRDADEARYQLDGRDV 69
Query: 291 YGKHVVIEFSR-----PGG 304
G +V+EF++ PGG
Sbjct: 70 DGSRIVVEFAKGVPRGPGG 88
>gi|170595296|ref|XP_001902324.1| Rnp [Brugia malayi]
gi|158590065|gb|EDP28832.1| Rnp, putative [Brugia malayi]
Length = 296
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVK------ELRETPLKKHQRFIEFYDVRDAAKALKE 284
+ V NL V+ L EIF +G ++ + + T L + ++EF DA KALK
Sbjct: 157 LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQPEDAEKALKH 216
Query: 285 MNGQEIYGKHVVIEFSRP 302
M+G +I G+ V E + P
Sbjct: 217 MDGGQIDGQEVTCELTHP 234
>gi|356544510|ref|XP_003540693.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 909
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V + V+ L+ FQ FG +++ + ++ +EF+++ DA +A+K MNG+ I
Sbjct: 98 LWVGGISQAVTKEDLEAEFQKFGKIEDFKFF-RDRNTACVEFFNLEDATQAMKIMNGKRI 156
Query: 291 YGKHVVIEFSR 301
G+H+ ++F R
Sbjct: 157 GGEHIRVDFLR 167
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ + L E+F +G + + + + F+ F V DA A + G +
Sbjct: 21 LWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYA-FVFFKRVEDAKAAKNALQGTSL 79
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQ 328
G + IEF+RP K+ + S + + +Q
Sbjct: 80 RGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFQ 117
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V LDS VS LK+ F FG V ++ P+ K F++F + ++A A++ +N
Sbjct: 309 NNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVK-IPIGKGCGFVQFANRKNAEDAIQGLN 367
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G I + V + + R G+ +
Sbjct: 368 GTVIGKQTVRLSWGRSTGNKQ 388
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 239 GVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+ G+ VV+E
Sbjct: 14 GVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVE 70
Query: 299 FSR 301
+R
Sbjct: 71 PAR 73
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|410907429|ref|XP_003967194.1| PREDICTED: RNA-binding protein 28-like [Takifugu rubripes]
Length = 718
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKAL 282
+ +++ NL S + LK++ FGP+ E + PLK + F++F ++ AAKAL
Sbjct: 104 KARLIIRNLSFQCSENDLKQVCTKFGPILEAK-IPLKPDGKMRGFAFVQFKNMSSAAKAL 162
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLN 322
+N +EI G+ V ++++ P ++ SSS A +L
Sbjct: 163 NALNLKEIKGRQVAVDWAVP---KDRYVATQSSSSAGNLK 199
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 241 SSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
S ++ +F+ +G +R+ LK F+EF D RDA A+ E+NG+++ G+ +++EFS
Sbjct: 15 SERDIEHLFRGYG---RIRDIVLKNGFGFVEFDDPRDADDAVYELNGKDLCGERIILEFS 71
Query: 301 RPGGHSKKFF 310
R G + +
Sbjct: 72 RRGPRGRGMY 81
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|402593268|gb|EJW87195.1| hypothetical protein WUBG_01897 [Wuchereria bancrofti]
Length = 296
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVK------ELRETPLKKHQRFIEFYDVRDAAKALKE 284
+ V NL V+ L EIF +G ++ + + T L + ++EF DA KALK
Sbjct: 157 LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQPEDAEKALKH 216
Query: 285 MNGQEIYGKHVVIEFSRP 302
M+G +I G+ V E + P
Sbjct: 217 MDGGQIDGQEVTCELTHP 234
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S ++E F+ FG +K++ P+ + + F+EFYD +DA ALK
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKRFGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAEVALK 71
Query: 284 EMNGQEIYGKHVVI 297
EMNG EI G V +
Sbjct: 72 EMNGAEIDGNRVEV 85
>gi|170284968|gb|AAI61144.1| Unknown (protein for MGC:185314) [Xenopus (Silurana) tropicalis]
Length = 91
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ FG + E+ LK F+EF D RDA A+ EMNG+E+ G+ V++E +R
Sbjct: 18 VERFFKGFGKIVEV---DLKNGYGFVEFEDSRDAEDAVYEMNGRELCGERVIVEHAR 71
>gi|393909058|gb|EJD75300.1| hypothetical protein LOAG_17528 [Loa loa]
Length = 296
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVK------ELRETPLKKHQRFIEFYDVRDAAKALKE 284
+ V NL V+ L EIF +G ++ + + T L + ++EF DA KALK
Sbjct: 157 LCVRNLSRNVTKEHLSEIFSVYGTLRTCELPMDRQHTHLGRGYGYVEFEQPEDAEKALKH 216
Query: 285 MNGQEIYGKHVVIEFSRP 302
M+G +I G+ V E + P
Sbjct: 217 MDGGQIDGQEVTCELTHP 234
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDAAK 280
N T+ + NLDS V L E+F GPV+ + R+ HQ F+EF + DA
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 281 ALKEMNGQEIYGKHVVIEFS 300
ALK MN ++YGK + + S
Sbjct: 86 ALKLMNMVKLYGKALRLNKS 105
>gi|126649301|ref|XP_001388322.1| U1 snrnp [Cryptosporidium parvum Iowa II]
gi|32398796|emb|CAD98506.1| U1 snrnp, possible [Cryptosporidium parvum]
gi|126117416|gb|EAZ51516.1| U1 snrnp, putative [Cryptosporidium parvum Iowa II]
Length = 267
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 220 NAVPDGNNQGTIVVFNLDSGVS----SSTLKEIFQAFGPVKELR--ETPLKKHQRFIEFY 273
N++ D + TI + NL+ +S +L+EIF +G ++ ++ + +K Q +I F
Sbjct: 17 NSLSDDDENKTIYINNLNDSISIPKQKLSLEEIFAKYGKIESIKMFNSYFRKGQAWITFS 76
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
+ A A+ G +I+GKHV + F+ + NSSS
Sbjct: 77 NAVSAVNAVNNEIGTQIFGKHVNVSFAAKESERRNIQVRNSSS 119
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQ 328
F+ F DV DA AL+E+NG GK + +E+++P S A +L +
Sbjct: 82 FVTFADVEDAKAALEELNGSTFEGKKIKVEYAQPRHRVVDETVGKSVPSAEALERKKQRE 141
Query: 329 TRNSDCPPPPLSADPPSYSPRSFASQAPHFR 359
+ +D PP L +S ++ A HFR
Sbjct: 142 QQKADTQPPKLIVRNLPWSIKTPEDLAAHFR 172
>gi|323509337|dbj|BAJ77561.1| cgd6_2150 [Cryptosporidium parvum]
Length = 297
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 220 NAVPDGNNQGTIVVFNLDSGVS----SSTLKEIFQAFGPVKELR--ETPLKKHQRFIEFY 273
N++ D + TI + NL+ +S +L+EIF +G ++ ++ + +K Q +I F
Sbjct: 17 NSLSDDDENKTIYINNLNDSISIPKQKLSLEEIFAKYGKIESIKMFNSYFRKGQAWITFS 76
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSS 316
+ A A+ G +I+GKHV + F+ + NSSS
Sbjct: 77 NAVSAVNAVNNEIGTQIFGKHVNVSFAAKESERRNIQVRNSSS 119
>gi|443708578|gb|ELU03655.1| hypothetical protein CAPTEDRAFT_219142 [Capitella teleta]
Length = 774
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ--------RFIEFYDVRDAAKAL 282
I+V NL + L+E FQ FG + E++ PLK + F++F V +A AL
Sbjct: 151 IIVRNLSFKCTEDILREKFQKFGKILEVK-IPLKGDKAKNTMKGFAFVQFETVEEAQAAL 209
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRN 331
EMN Q+I + V +++ G + KF AN +S + STI +T N
Sbjct: 210 -EMNAQQILNRPVAVDWCI--GKT-KFVQANVASVKEAKEDSTIEKTVN 254
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIE 298
G+ VV+E
Sbjct: 63 LGERVVVE 70
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 214 FIVPTCNAVPDGNNQGTI---------VVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
I+ CN DG Q T+ ++ N+ + L+ +F FG +K LR P+K
Sbjct: 697 LILQPCNVKNDGQKQKTLEKDRSSTKLLIKNVAFEATEKDLRRLFSPFGQIKSLR-LPMK 755
Query: 265 --KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+E+ ++A ALK ++ +YG+H+VIE ++
Sbjct: 756 FGNHRGFAFVEYVTQQEAQNALKALSSTHLYGRHLVIERAKEA 798
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDAAK 280
N T+ + NLDS V L E+F GPV+ + R+ HQ F+EF + DA
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 281 ALKEMNGQEIYGKHVVIEFS 300
ALK MN ++YGK + + S
Sbjct: 86 ALKLMNMVKLYGKALRLNKS 105
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDAAK 280
N T+ + NLDS V L E+F GPV+ + R+ HQ F+EF + DA
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 281 ALKEMNGQEIYGKHVVIEFS 300
ALK MN ++YGK + + S
Sbjct: 86 ALKLMNMVKLYGKALRLNKS 105
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAA 279
G N+ I V NL + + ++++F FG V K R P F+EF D RDA
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDAD 59
Query: 280 KALKEMNGQEIYGKHVVIEFSRPGG 304
A+K +G + G + +EF R GG
Sbjct: 60 DAVKARDGYDYDGYRLRVEFPRGGG 84
>gi|223648918|gb|ACN11217.1| Heterogeneous nuclear ribonucleoprotein Q [Salmo salar]
Length = 619
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 315 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEILEKSFSQFGK 374
Query: 255 VKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYAN 313
++ +++ K F+ F D RDAA KAL +MNG+ + G+H+ I F++P +K A
Sbjct: 375 LERVKKL---KDYAFVHF-DERDAAVKALAQMNGKVLEGEHIDIVFAKPPDQKRKERKAQ 430
Query: 314 SSSCASSL 321
+ +++
Sbjct: 431 RQAAKTNM 438
>gi|237833563|ref|XP_002366079.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211963743|gb|EEA98938.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|221486284|gb|EEE24545.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221508072|gb|EEE33659.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 382
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
PD T+ L V+ +L+++ G +K++ P +K F+EFYD+R A A
Sbjct: 60 PDALQSRTLFFGRLPEDVTEDSLRDVVLQHGDLKKVAVYP-EKRMAFVEFYDLRHAEAAR 118
Query: 283 KEMNGQEIYGKHVVIEFS 300
+ G ++ GK V ++FS
Sbjct: 119 DALRGSDVLGKRVEVQFS 136
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 201 ARGLVAGRPVWAQFIVPTCNAV--PDGN-NQGTIVVF---------NLDSGVSSSTLKEI 248
AR + G V + + +AV PD + N GT+ V N S +E+
Sbjct: 117 ARDALRGSDVLGKRVEVQFSAVKRPDKDGNTGTLYVRPVSTVHVSGNWTDPNSLDAYREL 176
Query: 249 FQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
F G +K++ ++ ++F+E++D+RDA KAL+ +NG G + I F++
Sbjct: 177 FSKHGDLKKVSANRKRETEKFVEYFDLRDAQKALESLNGYVFNGATLHICFAQ 229
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 61 YAQYPTHPQLGVPLP---PPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQM--E 115
Y+Q+ T P P P +RTL +P DV+E +R + G+++ V + E
Sbjct: 41 YSQWQTPSAQSAPNPLDQEPDALQSRTLFFGRLPEDVTEDSLRDVVLQHGDLKKVAVYPE 100
Query: 116 RLMEGIVTVHFYDLRHAEMAFKEIR 140
+ M V FYDLRHAE A +R
Sbjct: 101 KRM---AFVEFYDLRHAEAARDALR 122
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|328866397|gb|EGG14781.1| hypothetical protein DFA_10654 [Dictyostelium fasciculatum]
Length = 715
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
++ GR + F +P N + G I+V N + + + L+ F +G +K++ T
Sbjct: 289 ILQGRSIDVHFSIPK-NQSDESAFSGYILVKN--NTIPMNELRTFFSTYGDLKDV--TEY 343
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
K Q +EFYD R KA+KE +GQE+ G+ +
Sbjct: 344 KNGQLLVEFYDTRACDKAMKEAHGQELAGQSL 375
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ V + +F +G +++ + FI FYD+R+A A ++ G
Sbjct: 230 TLFVRNIAYNVKEDEIVAMFSKYGEIRKKFSAIENRGISFITFYDIREAEAAKNDVQGII 289
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+ + + FS P S +
Sbjct: 290 LQGRSIDVHFSIPKNQSDE 308
>gi|224133226|ref|XP_002327991.1| predicted protein [Populus trichocarpa]
gi|222837400|gb|EEE75779.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 196 VLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV 255
+ PPP + AG + ++ V + NN + V N+ V+ S L E+F FG +
Sbjct: 1 MAPPPLKSNKAGT-LKSETDQQNSAEVKESNN---LWVGNISREVADSDLMELFAQFGAL 56
Query: 256 KELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSS 315
+ + + F+ F V DA +A + G + G + IEF+RP SK + S
Sbjct: 57 DSVTTYSARSYA-FVYFKHVEDAKQAKDALQGSSLRGNQIKIEFARPAKPSKYLWVGGIS 115
Query: 316 SCAS 319
S S
Sbjct: 116 SSVS 119
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V + S VS L+E F FG +++ + +K ++E+ + DA +A+K MNG++I
Sbjct: 109 LWVGGISSSVSEERLEEEFLKFGKIEDFKFLRDRKIA-YVEYLKLEDAFEAMKNMNGKKI 167
Query: 291 YGKHVVIEFSR 301
G + ++F R
Sbjct: 168 GGDQIRVDFLR 178
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LDS V+ L++IF +G + ++ P+ KH F++F A +A++ +N
Sbjct: 317 NNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVK-IPVGKHCGFVQFTSRSCAEEAIRMLN 375
Query: 287 GQEIYGKHVVIEFSR 301
G ++ G+ V + + R
Sbjct: 376 GSQVGGQKVRLSWGR 390
>gi|47223958|emb|CAG06135.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 220 NAVPDGNNQGT--IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFY 273
+ P G +G+ ++V NLD GVS S L+E+F FGP+KE + K + F
Sbjct: 81 DGAPAGEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASIHYDRSGRSKGTADVHFQ 140
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSK 307
DA KA+K+ NG + G+ + I+ G +K
Sbjct: 141 HKADAIKAMKQYNGVPLDGQPMKIQQVTSGQETK 174
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LDS V+ L++IF +G + ++ P+ KH F++F A +A++ +N
Sbjct: 317 NNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVK-IPVGKHCGFVQFTSRSCAEEAIRMLN 375
Query: 287 GQEIYGKHVVIEFSR 301
G ++ G+ V + + R
Sbjct: 376 GSQVGGQKVRLSWGR 390
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 116 LGERITVERARGTPRG-SDQWRYGDS 140
>gi|393789438|ref|ZP_10377559.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
gi|392650886|gb|EIY44552.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
I V NL+ V + L+++ + +G V + RET K FIE D A+KA+ E+
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGTVSSVKVIMDRETGRSKGFAFIEMEDDTAASKAIAEL 62
Query: 286 NGQEIYGKHVVIEFSRP 302
NG E +G+ +V++ +RP
Sbjct: 63 NGAEYHGRTMVVKEARP 79
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ + L G + +LK+ F FG V R +T + F++F V A+ AL M
Sbjct: 38 LFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAM 97
Query: 286 NGQEIYGKHVVIEFS-----RPGG 304
+GQE++G+++ + ++ RPGG
Sbjct: 98 DGQELHGRNIRVSYATERAPRPGG 121
>gi|321472744|gb|EFX83713.1| hypothetical protein DAPPUDRAFT_301602 [Daphnia pulex]
Length = 250
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV-----RDAAKALKEM 285
+VV NLD GVS + +KE+F FGP+K + R + DV DA KA+K+
Sbjct: 99 LVVSNLDFGVSDADIKELFMEFGPLKHA-SVHYDRSGRSLGTADVVFERRLDAVKAMKQY 157
Query: 286 NGQEIYGKHVVIEFS 300
NG + G+ +VI+ +
Sbjct: 158 NGVPLDGRSMVIQMA 172
>gi|67482201|ref|XP_656450.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473655|gb|EAL51070.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703568|gb|EMD43997.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 289
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVRDAAKA 281
T+ V ++D + + LKE+F +G V + +KK + FIE+ DAAKA
Sbjct: 3 TLYVSDVDVSIDENKLKELFSPYGNVIN---STIKKSSKGTNDFYYAFIEYDRPEDAAKA 59
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
L+EM+ E+ GK + ++F++P
Sbjct: 60 LREMDQHELAGKRLNVKFAKP 80
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRT---RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|47086421|ref|NP_997973.1| RNA binding motif protein 14 [Danio rerio]
gi|46249892|gb|AAH68361.1| Zgc:85696 [Danio rerio]
gi|68085002|gb|AAH56604.2| Zgc:85696 [Danio rerio]
Length = 556
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D + + V NL + L IF+++G V + + F+ A +A++
Sbjct: 2 DKGHTVKLFVGNLALDTTQEELSAIFESYGQVVSCS---VLRQFAFVHLQGEGAAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR HS K F N SS ++ + ++QT
Sbjct: 59 ELNGREFKGRNLVVEESRGRPLHSTKVFVGNLSSMCTTEDLQELFQT 105
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL S ++ L+E+FQ FG V E + K F+ + DA +A++ ++G
Sbjct: 85 VFVGNLSSMCTTEDLQELFQTFGKVLECDKV---KGYAFVHMENKEDALQAIEALHGTSF 141
Query: 291 YGKHVVIEFSR 301
G+ + +E S+
Sbjct: 142 KGRPLSVELSK 152
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ +NG+
Sbjct: 80 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAIVSLNGR 139
Query: 289 EIYGKHVVIEFS 300
+++G+ + + ++
Sbjct: 140 QLFGQPIKVNWA 151
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G +L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---KLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ----RFIEFYDVRDAA 279
+G+ TI+V L V+ L+ F+ FGP+K +R K+ + FIEF D
Sbjct: 146 EGDPYKTIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTDKQGKPRGYAFIEFEHKADMK 205
Query: 280 KALKEMNGQEIYGKHVVIEFSR 301
+A K +G++I G+ V+++ R
Sbjct: 206 EAYKAADGKKIEGRRVLVDVER 227
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
++ V N+ V+ LKEIF G V R ET K F E+ D A A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 285 MNGQEIYGKHVVIEFSRPG---GHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPL 339
+NG EI G+++ ++F+ G G + + + N S + ++ SD PP +
Sbjct: 74 LNGYEINGRNLRVDFADGGDKSGGADRKRHDNGSHARHGGTSGSNFRNGGSDGGPPTM 131
>gi|402079023|gb|EJT74288.1| differentiation regulator [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 804
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
VG+ + P+ V L +G +R + L +P D++E +R DL FG + +++ R
Sbjct: 278 VGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDIAEEELREDLGKFGAIDTIKIVR-E 335
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 336 KSIAFVHFLSIANAIKAVSQLPQEAKWQAPRRVYYGKDRCAYVSKTQQQN---------- 385
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I SYA +L R L++ G NN G ++
Sbjct: 386 -------AAQYLGISPSYAHMLTGADRDLISSALAQQSVAAAAVATTAGGLNNLGNRTIY 438
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 439 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMI 496
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 497 HNRRLKIGWGKHSG 510
>gi|158254301|gb|AAI54223.1| Zgc:85696 [Danio rerio]
Length = 556
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D + + V NL + L IF+++G V + + F+ A +A++
Sbjct: 2 DKGHTVKLFVGNLALDTTQEELSAIFESYGQVVSCS---VLRQFAFVHLQGEGAAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR HS K F N SS ++ + ++QT
Sbjct: 59 ELNGREFKGRNLVVEESRGRPLHSTKVFVGNLSSMCTTEDLQELFQT 105
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL S ++ L+E+FQ FG V E + K F+ + DA +A++ ++G
Sbjct: 85 VFVGNLSSMCTTEDLQELFQTFGKVLECDKV---KGYAFVHMENKEDALQAIEALHGTSF 141
Query: 291 YGKHVVIEFSR 301
G+ + +E S+
Sbjct: 142 KGRPLSVELSK 152
>gi|387018162|gb|AFJ51199.1| RNA-binding protein 14-like [Crotalus adamanteus]
Length = 596
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ S + L+++F+A P E+ + LK+ F+ + A +A++++NG +
Sbjct: 7 VFVGNVPEEASQAELRDLFEAAVP-GEVVKVVLKEQYAFVHLRNEAAAERAIQKLNGHLL 65
Query: 291 YGKHVVIEFSRPG-GHSKKFFYANSSSCASSLNYSTIYQ 328
+ + V +EFSRP H+ K F N S+ +S ++Q
Sbjct: 66 HYRRVFLEFSRPRPTHTVKIFVGNVSATCTSGELRVLFQ 104
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I V N+ + +S L+ +FQ FGPV E + K F+ DA A++ +NG+EI
Sbjct: 85 IFVGNVSATCTSGELRVLFQEFGPVIEC---DIVKDYAFVHMEKDEDARTAIEHLNGREI 141
Query: 291 YGKHVVIEFS 300
GK + +E S
Sbjct: 142 KGKRINVELS 151
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+++ FG R+ LK F+EF DVRDA A+++++G++ G +++E + GG
Sbjct: 16 RDVEHLFGKYGRTRDVTLKNGFGFVEFDDVRDADDAMRDLHGRDFMGDRLIVERANSGGR 75
Query: 306 SKK 308
+
Sbjct: 76 RDR 78
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ LK++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 270 NNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVK-IPSGKRCGFVQFADRSSAEEALRVLN 328
Query: 287 GQEIYGKHVVIEFSR 301
G + G++V + + R
Sbjct: 329 GTLLGGQNVRLSWGR 343
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N + V L V L+ FQ G VK++ +K F+EF D RDA A+ E+N
Sbjct: 3 NGTRVFVGGLSHRVRERDLERFFQKIGRVKDI---AMKNGYAFVEFDDYRDADDAVYELN 59
Query: 287 GQEIYGKHVVIEFSR 301
G+E+ G+ V +E +R
Sbjct: 60 GRELNGERVSVERAR 74
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S +++ F+ FG +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 284 EMNGQEIYGKHVVI 297
EMNG E+ G + +
Sbjct: 72 EMNGSELDGNRIEV 85
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYG---RTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDAAK 280
N T+ + NLDS V L E+F GPV+ + R+ HQ F+EF + DA
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADY 85
Query: 281 ALKEMNGQEIYGKHVVIEFS 300
ALK MN ++YGK + + S
Sbjct: 86 ALKLMNMVKLYGKSLRLNKS 105
>gi|300122032|emb|CBK22606.2| unnamed protein product [Blastocystis hominis]
Length = 119
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 236 LDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
LD V L +F FG VKE+ T LK+ F+EF D DAA+A MN E+
Sbjct: 16 LDDQVDEQVLLGVFVPFGEVKEVTIPLDAGTGLKRGFGFVEFEDAEDAAEARDNMNNAEL 75
Query: 291 YGKHVVIEFS---RPGGHSKKFFYA 312
+GK + + +S +P S+K +A
Sbjct: 76 FGKVIKVTYSNRMKPSLISQKPIWA 100
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ +NG+
Sbjct: 42 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAIVSLNGR 101
Query: 289 EIYGKHVVIEFS 300
+++G+ + + ++
Sbjct: 102 QLFGQPIKVNWA 113
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYG---RTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-------FIEFYDVRDAAKALK 283
+ V +L GV S L+E F +G + ++ T LK Q F+EF + D KA++
Sbjct: 8 LFVGSLPWGVDDSGLREAFSKYGEI--IQATVLKDRQTGRSRGFGFVEFANDADGDKAIQ 65
Query: 284 EMNGQEIYGKHVVIEFSRP 302
EMNG ++ G+++V+ +RP
Sbjct: 66 EMNGADMDGRNIVVNEARP 84
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L++IF+ +G LR +K+ F+EF D RDA A +++G+ G H+++EF+R
Sbjct: 103 TQDLEDIFRKYG---RLRNVDMKREFGFVEFTDPRDADDARHDLDGRIFDGSHLIVEFAR 159
Query: 302 -----PGG 304
PGG
Sbjct: 160 GAQRGPGG 167
>gi|405965605|gb|EKC30968.1| RNA-binding protein 28 [Crassostrea gigas]
Length = 818
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK--KHQRF--IEFYDVRDAAKALK 283
+ +++ NL S LKE F+ FG V E++ LK K Q F ++F +V DA+KA+
Sbjct: 241 KARLIIRNLSFKCSEEKLKETFEKFGEVTEVQIPKLKNGKLQGFGIVQFKEVDDASKAMA 300
Query: 284 EMNGQEIYGKHVVIEFSRP 302
EMN + I + V ++++ P
Sbjct: 301 EMNAKPILNRPVAVDWTIP 319
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|348506138|ref|XP_003440617.1| PREDICTED: RNA-binding protein 28-like [Oreochromis niloticus]
Length = 715
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKAL 282
+ +++ NL + LKE+F FG V E++ PLK + F+ F V +A+KAL
Sbjct: 111 KARLIIRNLSFKCTEDHLKEVFAKFGTVVEVK-IPLKPDGKMRGFAFVLFKKVPEASKAL 169
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLN 322
MN +EI G+ V I+++ P KF SS ++S N
Sbjct: 170 NAMNLKEIKGRPVAIDWAVP---KDKFVTTQQSSNSASTN 206
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 214 FIVPTCNAVPDGNNQG--------TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK- 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 390 LILQLCHGRKDGQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKF 448
Query: 265 -KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ + +YG+H+VIE ++ G
Sbjct: 449 GSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEG 490
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + ++F GP K + +T F+EFY+ R AA +L MN
Sbjct: 8 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMN 67
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 68 GRKIMGKEVKVNWA 81
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + +G++ +++ F FGP+ E+R P K + F+ F AA A+ +NG
Sbjct: 204 TVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGY-SFVRFNSHESAAHAIVSVNGSS 262
Query: 290 IYGKHVV 296
I G HVV
Sbjct: 263 IEG-HVV 268
>gi|390354454|ref|XP_791429.3| PREDICTED: uncharacterized protein LOC586560 [Strongylocentrotus
purpuratus]
Length = 365
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N ++ + NL V+ LK++F+ +G V +R +K F+ + D R A+KA+ ++
Sbjct: 192 NLKSLWIGNLQPTVTEKELKDLFKPYGEVSSMRRMS-EKFCAFVNYKDPRMASKAMDKLQ 250
Query: 287 GQEIYGKHVVIEF 299
G+E++GK ++I+F
Sbjct: 251 GRELHGKFLLIKF 263
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 239 GVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
G L++ F+ +G +++ +K F+EF D RDA A+ E+NG+E+ G+ VV+E
Sbjct: 14 GTRERDLEKFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVE 70
Query: 299 ----FSRPGGH 305
+R G H
Sbjct: 71 PARGTARGGSH 81
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ GPV+ + +K FI++YD R AA A+ +NG+
Sbjct: 68 SVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 127
Query: 289 EIYGKHVVIEFS 300
+YG+ + + ++
Sbjct: 128 PLYGQPIKVNWA 139
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
+VV NL V+ L+++F AFG VK +R P + R FIEF +++ A++ +
Sbjct: 985 LVVKNLAFQVNKEELRKLFSAFGNVKSVR-IPKNVYNRSRGYAFIEFMSKKESCNAIESL 1043
Query: 286 NGQEIYGKHVVIEFS 300
+YG+H++I+F+
Sbjct: 1044 QHTHLYGRHLIIDFA 1058
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D + + V L S S L+++F +G V R+ +K F+EF D RDA A
Sbjct: 6 DRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRV---RDVDMKHDFAFVEFSDPRDADDARY 62
Query: 284 EMNGQEIYGKHVVIEFSR 301
+NG++ G +++EF++
Sbjct: 63 SLNGRDFDGSRIIVEFAK 80
>gi|118373060|ref|XP_001019724.1| hypothetical protein TTHERM_00136430 [Tetrahymena thermophila]
gi|89301491|gb|EAR99479.1| hypothetical protein TTHERM_00136430 [Tetrahymena thermophila
SB210]
Length = 1277
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKA 281
+P+ +I++ N+ V+ ++ F+ FG +K ++ K + IE+ + DA KA
Sbjct: 4 IPEKGEYNSILIHNIPENVTREEIQNSFKKFGTIKNIQSFKRKNYTIRIEYTNSEDAQKA 63
Query: 282 LKEMNGQEIYGKHVVIEF 299
+KEMN G+ + I+F
Sbjct: 64 MKEMNFHTFQGEEINIQF 81
>gi|157132620|ref|XP_001656100.1| heterogeneous nuclear ribonucleoprotein r [Aedes aegypti]
gi|108881674|gb|EAT45899.1| AAEL002879-PA, partial [Aedes aegypti]
Length = 517
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL S LKE F+ FG
Sbjct: 272 RRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDTSEEKLKESFEQFGK 331
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
V+ +++ K FI F D A A+KE++G+++ G ++ + ++P KK
Sbjct: 332 VERVKKI---KDYAFIHFEDRDHAVNAMKELDGKDLGGSNLEVSLAKPPSDKKK 382
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKE 284
++ V NLD V + L+EIF+ GPVK + + R F++FYD A +A++
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 285 MNGQEIYGKHVVIEF 299
M+G+ +YG+ + I++
Sbjct: 74 MHGRRVYGQEIRIDW 88
>gi|357123127|ref|XP_003563264.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 272
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 223 PDGNNQG-TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDV 275
PD N G T+ V L S V+ LK+ F G V L+ H R FI V
Sbjct: 59 PDAGNHGNTLYVTGLSSKVTDRELKDYFNKEGKVVSC-HVVLEPHTRVSRGFAFITMDTV 117
Query: 276 RDAAKALKEMNGQEIYGKHVVIEFSRPG 303
DA + +K +N E+ G+H+ +E SR G
Sbjct: 118 EDAERCIKYLNQSELQGRHITVEKSRRG 145
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L E+FQ GPV+ + +K F+++YD R AA A+ ++G+
Sbjct: 74 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 134 HIYGQAIKVNWAFASTQREDTSGHFHIFVGDLSSEVNDATLY 175
>gi|401881484|gb|EJT45783.1| hypothetical protein A1Q1_05696 [Trichosporon asahii var. asahii
CBS 2479]
gi|406696607|gb|EKC99889.1| hypothetical protein A1Q2_05854 [Trichosporon asahii var. asahii
CBS 8904]
Length = 551
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ +S ++ F+ +G VKE + ++ F+ F+DVR A A + + G +
Sbjct: 131 TLFIRNVAYETNSDDFRKQFEQYGEVKEWFDAIPRRGMVFVTFFDVRAAEAARQGVMGTK 190
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLS 340
++G+ + + FS P H + C S N ++ T PP P+
Sbjct: 191 LFGRPIDVHFSLPKDHDQ------DGPCDESKNNGSLLVTL---TPPRPID 232
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 214 FIVPTCNAVPDGNNQG--------TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK- 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 721 LILQLCHGRKDGQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKF 779
Query: 265 -KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ + +YG+H+VIE ++ G
Sbjct: 780 GSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEG 821
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 214 FIVPTCNAVPDGNNQG--------TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK- 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 758 LILQLCHGRKDGQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKF 816
Query: 265 -KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ + +YG+H+VIE ++ G
Sbjct: 817 GSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEG 858
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G V R+ +K+ F+EF D RDA A ++G++
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRV---RDVDMKRDYAFVEFGDPRDADDARHYLDGRDF 69
Query: 291 YGKHVVIEFSR 301
G + +EFSR
Sbjct: 70 DGSRITVEFSR 80
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G V R+ +K+ F+EF D RDA A ++G++
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRV---RDVDMKRDYAFVEFGDPRDADDARHYLDGRDF 69
Query: 291 YGKHVVIEFSR 301
G + +EFSR
Sbjct: 70 DGSRITVEFSR 80
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 242 SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
+ L++IF+ +G LR +K+ F+EF D RDA A +++G+ G H+++EF+R
Sbjct: 103 TQDLEDIFRKYG---RLRNVDMKREFGFVEFTDPRDADDARHDLDGRIFDGSHLIVEFAR 159
Query: 302 -----PGG 304
PGG
Sbjct: 160 GAQRGPGG 167
>gi|413919829|gb|AFW59761.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
gi|413919830|gb|AFW59762.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
Length = 437
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKAL 282
D + ++ V N+ V+ + L+E+FQ+ GPV+ + +K FI+++D R AA A+
Sbjct: 271 DSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYHDRRYAALAI 330
Query: 283 KEMNGQEIYGKHVVIEFS 300
+NG+++YG+ + + ++
Sbjct: 331 LSLNGRQLYGQPIKVNWA 348
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRD 277
DG + +++V NL S ++ F G VK++ PL H R F+EF+ D
Sbjct: 5 DGQQRMSLLVRNLSYQTSPEAVRSAFAVHGSVKDV-YLPLDYHSRMPRGFGFVEFWHRED 63
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A +AL++M+G E+ GK + + ++ G
Sbjct: 64 AERALEKMDGFELDGKAIEVAIAKKG 89
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|339233572|ref|XP_003381903.1| putative RNA recognition [Trichinella spiralis]
gi|316979226|gb|EFV62043.1| putative RNA recognition [Trichinella spiralis]
Length = 351
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+++ F+ FG + RE LK F+EF DA A E+NG+E++G+ +++E +R
Sbjct: 65 IEKFFRGFGRI---REIFLKNGYGFVEFEHTEDADDACYELNGREMFGERLIVEIARGTP 121
Query: 305 HSK 307
H +
Sbjct: 122 HGR 124
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|308803903|ref|XP_003079264.1| terminal ear1 (ISS) [Ostreococcus tauri]
gi|116057719|emb|CAL53922.1| terminal ear1 (ISS) [Ostreococcus tauri]
Length = 494
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 219 CNAVPDGNNQGTIVVFNLDSGVS--SSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVR 276
C+ +P NQG + +++ + + + + +FG VK L ++ RFIE++DVR
Sbjct: 113 CDWIPGMENQGRFLAYDIGTAEEERDAEFRALLDSFGEVKRLMTPRGHENHRFIEYFDVR 172
Query: 277 DAAKALKEMNGQEIYGKHVVIEF 299
A A+ E+ K + ++F
Sbjct: 173 HAHTAVTELQQSGFRSKPLSVDF 195
>gi|330933232|ref|XP_003304096.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
gi|311319509|gb|EFQ87793.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKEL--RETPLKKHQRFIEFYDVRDAAKALK 283
TI V NL+ V T+K+ +FQ +GP+ ++ + + +K Q FI F + A +A++
Sbjct: 26 TIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQAFIVFDSEKAALEAVE 85
Query: 284 EMNGQEIYGKHVVIEFSRPGGHS 306
EMNG E+YGK V++ R HS
Sbjct: 86 EMNGFEMYGK--VMKVHRAKTHS 106
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 214 FIVPTCNAVPDGNNQG--------TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK- 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 758 LILQLCHGRKDGQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKF 816
Query: 265 -KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ + +YG+H+VIE ++ G
Sbjct: 817 GSHRGFAFVEFVTKQEAQNALQALASTHLYGRHLVIERAKEG 858
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L+ S S +K F+A+GP+K +R ET + FIE+ RD A K+
Sbjct: 140 TLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQ 199
Query: 285 MNGQEIYGKHVVIEFSR 301
+G+++ K V+++ R
Sbjct: 200 ADGRKVDNKRVLVDVER 216
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
V NL V+ + + ++F GP K + +T F+EFY+ R AA AL MNG++
Sbjct: 51 VGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGRK 110
Query: 290 IYGKHVVIEFSRPGGHSKK 308
I GK V + ++ KK
Sbjct: 111 IMGKEVKVNWATTPSSQKK 129
>gi|224093058|ref|XP_002309788.1| predicted protein [Populus trichocarpa]
gi|222852691|gb|EEE90238.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--FIEFYDVRDAAKALKEMNGQ 288
+ V + S VS L+E F FG +++ + ++ Q ++E++ + DA++A+K MNG+
Sbjct: 86 LWVGGIGSSVSEEWLEEEFLKFGKIEDFK---FRRDQNTAYVEYFKLEDASQAMKNMNGK 142
Query: 289 EIYGKHVVIEFSR 301
+I G + ++F R
Sbjct: 143 KIGGDQLRVDFLR 155
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+ V+ S L ++F +G + + T + F+ F V DA +A + G +
Sbjct: 9 LWVGNISRDVTESDLMKLFAQYGSIDNV-TTYTARSYGFVYFKRVEDAKQAKDALQGTSL 67
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCAS 319
G ++IEF+RP S+ + S S
Sbjct: 68 RGNQIIIEFARPAKPSRHLWVGGIGSSVS 96
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L S S L+ +F +G V R+ +K+ F+EF D RDA A ++G+++
Sbjct: 13 LYVGHLASRTRSRDLEYLFSKYGRV---RDVDMKRDYAFVEFSDPRDADDARYHLDGKDL 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 201 ARGLVAGRPVWAQFIVPTCNAV------PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGP 254
A GLV GRPV + T + P GNN I V NL + + ++++F +G
Sbjct: 35 ALGLV-GRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGA 93
Query: 255 VKELRETPLKKHQ-----RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
+ R+ LK + F+EF D+RDA + +G + YG + +EF
Sbjct: 94 I---RDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEF 140
>gi|169621321|ref|XP_001804071.1| hypothetical protein SNOG_13871 [Phaeosphaeria nodorum SN15]
gi|111057775|gb|EAT78895.1| hypothetical protein SNOG_13871 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L +P DVSE +R DL FG + V++ R
Sbjct: 260 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDVSEDELREDLSKFGPIDTVKIVR-E 317
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 318 KAIGFVHFLSIGNAIKAVAQLPQEPKWQAPRRVYYGKDRCAYVSKTQQQN---------- 367
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 368 -------AAQYLGIAPGYAHVLNGADRDMISNALAQQSVAAAAVATSAGGVNNLGNRTVY 420
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 421 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 478
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 479 HNRRLKIGWGKHSG 492
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + NLD + L++ F +G + EL T +K F+ F ++ +A KA++ + G+E
Sbjct: 510 VYIGNLDESWTEDRLRQDFSEYGEI-ELVNTLREKSCAFVNFTNIANAIKAIEAIRGREE 568
Query: 291 YGKHVVIEFSR 301
Y K + F +
Sbjct: 569 Y-KRFKVNFGK 578
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 162 MLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNA 221
++MN D N+ +A + + A+ L + GR V F
Sbjct: 397 IVMNKDGNSRGMAYVEFKTEAEADK---------ALEEKQGTEIEGRAVVIDFTGEKSQQ 447
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVR 276
T++V NL + TL+E+F+ ++ P R F++F
Sbjct: 448 ENQKGESTTLIVNNLSYAATEETLQEVFKKASSIR----VPQNNQGRPKGYAFVDFATAE 503
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRP 302
DA +AL +N EI G+ + +EFS P
Sbjct: 504 DAKEALNSLNNTEIEGRTIRLEFSSP 529
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-ETPLKKHQR----FIEFYDVRDAAKALKEM 285
+++ L V+ S L+E+F+ FG +K ++ T H+ F+EF +AA+A++ M
Sbjct: 86 LIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAIQAM 145
Query: 286 NGQEIYGKHVVIEFSRPGGHS 306
NG++ K + + +RP S
Sbjct: 146 NGRQYMNKRLKVSIARPSSSS 166
>gi|189205961|ref|XP_001939315.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975408|gb|EDU42034.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 244
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKEL--RETPLKKHQRFIEFYDVRDAAKALK 283
TI V NL+ V T+K+ +FQ +GP+ ++ + + +K Q FI F + A +A++
Sbjct: 26 TIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQAFIVFDSEKAALEAVE 85
Query: 284 EMNGQEIYGKHVVIEFSRPGGHS 306
EMNG E+YGK V++ R HS
Sbjct: 86 EMNGFEMYGK--VMKVHRAKTHS 106
>gi|340905286|gb|EGS17654.1| RNA recognition motif-containing protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 801
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L G +R + L +P D++E +R DL FG + V++ R
Sbjct: 265 IGWGK-PSQVPTSVALAVQQQGASRNVYLGNLPEDITEEEIREDLGKFGPIDTVKIVR-E 322
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +EQ Q ++ Y K+ Y S N
Sbjct: 323 KNIAFVHFLSIANAIKAVNQLPQEQKWQAPRRVYYGKDRCAYVSKTQQQN---------- 372
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA +L R L++ G N G ++
Sbjct: 373 -------AAQYLGIAPGYAHLLTGADRDLISNALAQQSVAAAAVATAAGGIQNLGNRTIY 425
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL ++ G I
Sbjct: 426 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAATFYALSQLQGLMI 483
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 484 HNRRLKIGWGKHSG 497
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 131
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 132 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 173
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALK 283
G I + L+ TL+EIF FGPV + RET + F+ F DA A+K
Sbjct: 8 GKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVK 67
Query: 284 EMNGQEIYGKHVVIEFSR 301
EMNG + GK + ++ +R
Sbjct: 68 EMNGVILDGKRIKVKQAR 85
>gi|407040620|gb|EKE40231.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 326
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVRDAAKA 281
T+ V ++D + + LKE+F +G V + +KK + FIE+ DAAKA
Sbjct: 39 TLYVSDVDVSIDENKLKELFSPYGNVIN---STIKKSSKGTNDFYYAFIEYDRPEDAAKA 95
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
L+EM+ E+ GK + ++F++P
Sbjct: 96 LREMDQHELAGKRLNVKFAKP 116
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD + L+E+F FG + + + L K F+ F +A++AL EMNG+ I
Sbjct: 328 NLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMI 387
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 388 SGKPLYVAFAQRKEDRKAMLQAQFS 412
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L V +++ F+ +G +KE+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEV---AMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 62 LGERVSVERAR 72
>gi|449295579|gb|EMC91600.1| hypothetical protein BAUCODRAFT_38709 [Baudoinia compniacensis UAMH
10762]
Length = 239
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 224 DGNN---QGTIVVFNLDSGVSSSTL----KEIFQAFGPVKEL--RETPLKKHQRFIEFYD 274
DG+ TI + NLD V +TL +E+F+ FG + ++ +++ +K Q FI YD
Sbjct: 4 DGDEIPPSATIYIKNLDEDVKLTTLVPALRELFEDFGNIIDIVAKKSVKRKGQAFI-VYD 62
Query: 275 VRDAAKALK-EMNGQEIYGKHVVIEFSR 301
DAA+ K EMN EI+GK + IEF++
Sbjct: 63 SVDAAQDAKDEMNSFEIFGKPMHIEFAK 90
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V NL + L E+F +G VK +R E+ K ++EF DV A KA + +
Sbjct: 411 LFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGL 470
Query: 286 NGQEIYGKHVVIEFSRP 302
GQEI G+ V ++FS+P
Sbjct: 471 AGQEIAGRAVRLDFSQP 487
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKAL 282
+GT+ + N+ + ++L EIF GPV+EL R+T K F+EF D A A+
Sbjct: 3 EGTVFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSAV 62
Query: 283 KEMNGQEIYGKHVVIEFS 300
+ +NG+E G+ + ++ +
Sbjct: 63 RNLNGREYNGRQLRVDHA 80
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 235 NLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
NLD + L+E+F FG + + + L K F+ F +A++AL EMNG+ I
Sbjct: 334 NLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMI 393
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
GK + + F++ K A S
Sbjct: 394 SGKPLYVAFAQRKEDRKAMLQAQFS 418
>gi|198437692|ref|XP_002131706.1| PREDICTED: similar to eukaryotic translation initiation factor 3,
subunit G [Ciona intestinalis]
Length = 284
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
+ Q TI V NL S L+E+F+ FGP++ + + T K FI FY+ DAAK
Sbjct: 197 DEQATIRVTNLSEETKESDLQELFKPFGPLQRIYLAKDKHTQQSKGFAFINFYNRDDAAK 256
Query: 281 ALKEMNGQEIYG-KHVV--IEFSRP 302
A+K + G +G H++ +E+++P
Sbjct: 257 AIKSVCG---FGYDHLILNVEWAKP 278
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEMNGQEIYGKH 294
V+ +LK F+ FG V + + + QR F+ F DA KA++EMN QE+ G+
Sbjct: 13 VTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEMNEQELEGRR 72
Query: 295 VVIEFSRP 302
+ ++ SRP
Sbjct: 73 IKVDVSRP 80
>gi|296005401|ref|XP_002809024.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
gi|225631965|emb|CAX64305.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
Length = 125
Score = 47.0 bits (110), Expect = 0.017, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL----KKHQ--RFIEFYDVRD 277
D N + V +D + +L +IF +FG ++ + E PL KK++ F+E+ +V D
Sbjct: 3 DNNATDILFVGGIDETIDEKSLYDIFSSFGDIRNI-EVPLNMTTKKNRGFAFVEYVEVDD 61
Query: 278 AAKALKEMNGQEIYGKHVVIEFSR 301
A AL MN E+ GK + + +S+
Sbjct: 62 AKHALYNMNNFELNGKRIHVNYSK 85
>gi|258568356|ref|XP_002584922.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906368|gb|EEP80769.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 745
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V +L + ++ +L E F P+K +T K F+ F DV DA +AL+E
Sbjct: 47 TLFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFTDVEDAQRALEE 106
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPL 339
+NG G+ +VIE + P S A + + R D PP L
Sbjct: 107 LNGSIFDGRKIVIEVAEPRRREIDEKVGKSVPSAEATKVKEEREQRRKDAQPPKL 161
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 47.0 bits (110), Expect = 0.018, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYG---RTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
>gi|301608798|ref|XP_002933974.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Xenopus
(Silurana) tropicalis]
Length = 770
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 451 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFGQFGK 510
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+E+ G+++ I F++P +K A
Sbjct: 511 LERVKKL---KDYAFIHFDERVGAVKAMEEMNGKELEGENIEIVFAKPPDQKRKERKAQR 567
Query: 315 SSCASSLNYSTIY 327
+ + + Y Y
Sbjct: 568 QAAKNQM-YDEYY 579
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVR 276
V + N TI V NLD VS + L E+F GPV + ++ + HQ FIEF
Sbjct: 6 VTERNQDATIYVGNLDEKVSETLLWELFLQAGPVVNVHMPKDRITQAHQGYGFIEFLGED 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSK 307
DA A+K MN ++YGK + + ++ H+K
Sbjct: 66 DADYAIKIMNMIKLYGKPIRV--NKASAHNK 94
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEMNGQEIYGKH 294
V+ +LK F+ FG V + + + QR F+ F DA KA++EMN QE+ G+
Sbjct: 13 VTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEMNEQELEGRR 72
Query: 295 VVIEFSRP 302
+ ++ SRP
Sbjct: 73 IKVDVSRP 80
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 204 LVAGRPVWAQFIVPTCNAVP-----DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL 258
L+AGRP+ + P V + TI V N+D +++ TLK IF+ GPV ++
Sbjct: 184 LLAGRPMKIELATPKKKKVSVLGTGKFDRARTISVLNVDDKINTETLKAIFEEIGPVTQI 243
Query: 259 RETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
P + + IEF VR + A + NG++I
Sbjct: 244 ELQP-ENNAALIEFETVRSSGMADFKFNGRKI 274
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALK 283
G I + L+ TL+EIF FGPV + RET + F+ F DA A+K
Sbjct: 8 GKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVK 67
Query: 284 EMNGQEIYGKHVVIEFSR 301
EMNG + GK + ++ +R
Sbjct: 68 EMNGVILDGKRIKVKQAR 85
>gi|171846506|gb|AAI61767.1| syncrip protein [Xenopus (Silurana) tropicalis]
Length = 638
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 319 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFGQFGK 378
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+E+ G+++ I F++P +K A
Sbjct: 379 LERVKKL---KDYAFIHFDERVGAVKAMEEMNGKELEGENIEIVFAKPPDQKRKERKAQR 435
Query: 315 SSCASSLNYSTIY 327
+ + + Y Y
Sbjct: 436 QAAKNQM-YDEYY 447
>gi|432863511|ref|XP_004070103.1| PREDICTED: RNA-binding protein 28-like [Oryzias latipes]
Length = 687
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
+++ NL S LKE+F+ +G V E + PLK + F+ F +V AAKALK M
Sbjct: 115 LIIRNLSFKCSEDDLKEVFEKYGTVLEAK-IPLKPDGKMRGFAFVLFKNVCGAAKALKAM 173
Query: 286 NGQEIYGKHVVIEFSRP 302
N +EI G+ V ++++ P
Sbjct: 174 NLKEIKGRPVAVDWAVP 190
>gi|355722853|gb|AES07708.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Mustela
putorius furo]
Length = 698
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 441 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 497
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 498 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 529
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 134 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 175
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L V +++ F+ +G +KE+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEV---AMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 62 LGERVSVERAR 72
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 226 NNQGT----------IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV 275
NNQGT I V NLDS V+ L++ F +G + ++ P K F++F +
Sbjct: 174 NNQGTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVK-IPAGKQCGFVQFTNR 232
Query: 276 RDAAKALKEMNGQEIYGKHVVIEFSR 301
A +AL+ +NG ++ G++V + + R
Sbjct: 233 SSAEEALRVLNGMQLGGRNVRLSWGR 258
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 49 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 108
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 109 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 150
>gi|340052756|emb|CCC47040.1| putative RNA-binding protein TbRBP6 [Trypanosoma vivax Y486]
Length = 231
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDA 278
D ++V L V+S+ L E+F FG + R +T + K F+ F +V DA
Sbjct: 126 DDRYHKQLIVNYLAPDVTSNELHELFSRFGELDGARVIYDRQTHMSKGYGFVYFSNVEDA 185
Query: 279 AKALKEMNGQEIYGKHVVIEFS 300
A + MNG E++GK + + +S
Sbjct: 186 KDAFERMNGYELHGKWLKVSYS 207
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ FG LRE LK F+EF D RDA A+ E+NG+++ G+ V+IE +R
Sbjct: 19 VERFFRGFG---HLREVNLKNGFGFVEFDDPRDADDAVYELNGKDLCGERVIIEHAR 72
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G +R +K F+EF D RDA A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYG---RIRGVDMKNDFAFVEFSDPRDADDARYSLDGRDV 69
Query: 291 YGKHVVIEFSRPG 303
G +++EF++ G
Sbjct: 70 EGSRIIVEFAKGG 82
>gi|255932047|ref|XP_002557580.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582199|emb|CAP80372.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 152
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL--------RETPLKKHQRFIEFYDVRDAA 279
+ T+ V LD GV++ TL E F FG V ++ T + + ++EF +DA
Sbjct: 8 KSTVYVGGLDQGVTAHTLAEAFVPFGEVVDISLPKPDQPNSTEVHRGFGYVEFDLPQDAK 67
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
+A+ M+G EIYG+ + + ++P
Sbjct: 68 EAIDNMDGSEIYGRTIKVAAAKP 90
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ L+++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 268 NNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVK-IPAGKRCGFVQFADRSCAEEALRVLN 326
Query: 287 GQEIYGKHVVIEFSR 301
G + G++V + + R
Sbjct: 327 GTLLGGQNVRLSWGR 341
>gi|321468659|gb|EFX79643.1| hypothetical protein DAPPUDRAFT_319432 [Daphnia pulex]
Length = 695
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + LKE F+A GP++ +++ K F+ F + DA +A+ +NG +
Sbjct: 353 LYVRNLTQEFTEEKLKEAFEAHGPIQRVKKI---KDYAFVHFEERDDAVQAMDALNGHTL 409
Query: 291 YGKHVVIEFSRPGGHSKK 308
YG ++ + ++P KK
Sbjct: 410 YGANLEVSLAKPPSDRKK 427
>gi|401827099|ref|XP_003887642.1| hypothetical protein EHEL_071350 [Encephalitozoon hellem ATCC
50504]
gi|392998648|gb|AFM98661.1| hypothetical protein EHEL_071350 [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 116 RLMEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLAT 175
+L + I+ F DL+H E ++++ ++SY ++N Y +L
Sbjct: 11 QLTKTIIVTGFNDLKHHEEVRDRVKKRFEV--KESYTIQNDYRVLCILF----------- 57
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP-TCNAVPDGNNQGTIVVF 234
YD + E++ + + GL + + +++ +P + + NQ T++
Sbjct: 58 --YDERKAREAISYL--------KESEGLSSYHII-SKYEIPRDMDKCDESRNQSTLLFT 106
Query: 235 --NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
NL V E FG VK++R +K HQR +EFYD R A A MN
Sbjct: 107 FKNLAGSVDDKEFSEEVCKFGEVKDIR--YVKTHQRCVEFYDSRSAVAAFHGMN 158
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD + ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAILDGRELRVQMARYG 93
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKEL--RETPLKKHQRFIEFYDVRDAAKALK 283
TI V NL+ V T+K+ +FQ +GP+ ++ + + +K Q FI F + A +A++
Sbjct: 26 TIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQAFIVFDSEKAALEAVE 85
Query: 284 EMNGQEIYGKHVVIEFSRPGGHS 306
EMNG E+YGK V+ R HS
Sbjct: 86 EMNGFEMYGK--VMRVHRAKTHS 106
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD + ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAILDGRELRVQMARYG 93
>gi|47194964|emb|CAF92225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 104
Score = 46.6 bits (109), Expect = 0.021, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 220 NAVPDGNNQGT--IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFY 273
+ P G +G+ ++V NLD GVS S L+E+F FGP+KE + K + F
Sbjct: 18 DGAPAGEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASIHYDRSGRSKGTADVHFQ 77
Query: 274 DVRDAAKALKEMNGQEIYGKHVVI 297
DA KA+K+ NG + G+ +I
Sbjct: 78 HKADAIKAMKQYNGVPLDGRASLI 101
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ +NG+
Sbjct: 73 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRYAALAIVSLNGR 132
Query: 289 EIYGKHVVIEFS 300
+++G+ + + ++
Sbjct: 133 QLFGQPIKVNWA 144
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V L+ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDAEDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS S L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + +SFA
Sbjct: 123 FGVILQTPKIMRDPETGKSKSFA 145
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
G+++ + V NL +G L+ F +GP++ + F+EF D RDA A++
Sbjct: 35 GDSETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 285 MNGQEIYGKHVVIEFS 300
++G+ I G V +E S
Sbjct: 95 LDGKVICGSRVRVELS 110
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS S L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + +SFA
Sbjct: 123 FGVILQTPKIMRDPETGKSKSFA 145
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIE 271
P + PD N I V +L S V + L+E F FG + + R +T K F+
Sbjct: 36 PAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVS 95
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F +DA A+ MNGQ + G+ + ++
Sbjct: 96 FLRKQDAETAINAMNGQWLGGRVIRTNWA 124
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 205 VAGRPVWAQFIVPTCNAVP-----DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR 259
VAG P + T + +P D Q T+ V N+ V+ S ++ +F+ +G + ++
Sbjct: 1279 VAGSP-----MSTTASELPEAPDTDAIRQKTLYVLNIADTVNDSKIRAVFEKYGSLHKV- 1332
Query: 260 ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
+ L +EF +V+DA KA+ ++G EI G+ +
Sbjct: 1333 QMQLNHQAAIVEFDEVKDAGKAMLALDGHEIDGRAI 1368
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK--KHQRF--IEFYDVRDAAKALKEM 285
T+ V N + ++E+F+ GP+ E+R LK H+RF ++F DA KA EM
Sbjct: 1086 TVYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNNHRRFCYVQFDASEDAEKAT-EM 1144
Query: 286 NGQEIYGKHVVIEFSRP 302
NG+++ G +V + S P
Sbjct: 1145 NGKDVEGFKLVSKLSDP 1161
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S S L+ +F +G V R +K F+EF D RDA A ++G+++
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGRV---RGVDMKNDFAFVEFSDPRDADDARYNLDGRDV 69
Query: 291 YGKHVVIEFSRPG 303
G +++EF++ G
Sbjct: 70 EGSRIIVEFAKGG 82
>gi|320580913|gb|EFW95135.1| eukaryotic translation initiation factor 3 Rna-binding subunit,
putative [Ogataea parapolymorpha DL-1]
Length = 286
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
++ T+ V +L+ V L+E+F+ +G +K RET K F+EF +V DA +
Sbjct: 202 DDSTTLRVTSLNEQVDEMMLREVFERYGIIKRATVLRDRETRRSKGIAFVEFENVNDAQR 261
Query: 281 ALKEMNGQEIYGKHVVIEFSRP 302
AL+ +NG+ + +++S+P
Sbjct: 262 ALEGLNGRGFMNLIMKVDWSKP 283
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L+ V L++ F+ +G + E+ LK F+EF D RDA A+ ++NG+++
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEV---LLKNGYGFVEFDDYRDAEDAVHDLNGKKL 61
Query: 291 YGKHVVIEFSR 301
G+ + +E +R
Sbjct: 62 MGERISVELAR 72
>gi|348578330|ref|XP_003474936.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Cavia porcellus]
Length = 533
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 249 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 305
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 306 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 337
>gi|296420654|ref|XP_002839884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636090|emb|CAZ84075.1| unnamed protein product [Tuber melanosporum]
Length = 734
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
VG+ + P+ V L +G +R + L +P DVSE +R DL FG + V++ R
Sbjct: 202 VGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDVSEEELREDLGKFGPIDTVKIVR-E 259
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 260 KAIGFVHFLSIGNAIKAVSQLPQEAKWQSPRRVYYGKDRCAYVSKTQQQN---------- 309
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 310 -------AAQYLGIAPGYAHVLNGADREMISSALAQQSVAAAAVATSAGGMNNLGNRTVY 362
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 363 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMI 420
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 421 HNRRLKIGWGKHSG 434
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NLD S L++ F +G + EL +K F+ F ++ +A KA++ + G+E
Sbjct: 452 VYVGNLDESWSEERLRQDFSEYGEI-ELVNALREKSCAFVNFTNIANAIKAIEAVRGREE 510
Query: 291 YGKHVVIEFSR 301
Y K I F +
Sbjct: 511 Y-KRFKINFGK 520
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKAL 282
+QG++ + LD + L++ F+ +G + LR + + F++F D RDA AL
Sbjct: 4 RSQGSLFIGRLDKHTRTRDLEDRFEKYGRI--LRCDVKYGAEMAYAFLDFEDHRDAEDAL 61
Query: 283 KEMNGQEIYGKHVVIEFSR 301
KE NG+E G +V+E+++
Sbjct: 62 KEENGREYQGVSMVVEWAK 80
>gi|417412066|gb|JAA52448.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 638
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 355 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 411
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 412 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 442
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 131
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
+YG+ + + ++ + F+ +S +N +T+Y
Sbjct: 132 HVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 173
>gi|241752336|ref|XP_002401050.1| RNA-binding protein precursor, putative [Ixodes scapularis]
gi|215508305|gb|EEC17759.1| RNA-binding protein precursor, putative [Ixodes scapularis]
Length = 195
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVR 276
GN+Q +++ L ++ + +F + GP+K + + +H+ F+++ +
Sbjct: 6 GNSQTNLIINYLPQTLTDEEFRSLFTSIGPIKS---SKIVRHKATGYSYGFGFVDYQSIE 62
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
DAA+A+ +NG ++ K + + ++RPGG + K
Sbjct: 63 DAARAVGTLNGLQLQNKKIKVAYARPGGETIK 94
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 219 CNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFY 273
+ V + +Q ++ V N+ VS T++ IF G V + RET K FIEF
Sbjct: 8 SSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFP 67
Query: 274 DVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSD 333
D++ A A++ +NG E+ G+ + ++ S GG + + F ++S++ A +
Sbjct: 68 DIQTAEVAIRNLNGYELSGRILRVD-SAAGGMNMEEFGSSSNAPAP---------VEENP 117
Query: 334 CPPPPLSADPPSYSPRSFASQAPHFR---KKSPSNSFKGNPNNVNVTCSIEPSVASLSLA 390
P + P ++ AS AP K S K NP+ ++ P +A L
Sbjct: 118 YGPECDAGKAPERISQTVASLAPEKMFELMKQLQESLKNNPSELHKFLVEHPQIAYAVLQ 177
Query: 391 NAI 393
A+
Sbjct: 178 AAV 180
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ G V+ + +K F+++YD R AA A+ +NG+
Sbjct: 66 SVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAILTLNGK 125
Query: 289 EIYGKHVVIEFSRPGGH 305
+I+G+ + + ++ G
Sbjct: 126 QIFGQLIRVNWAYASGQ 142
>gi|330790853|ref|XP_003283510.1| hypothetical protein DICPUDRAFT_147176 [Dictyostelium purpureum]
gi|325086620|gb|EGC40007.1| hypothetical protein DICPUDRAFT_147176 [Dictyostelium purpureum]
Length = 731
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N+ S S + +IF G +K+ + FI FYD+RDA +A E+ G
Sbjct: 238 TLFVRNVAYSCSESEIVKIFSKIGEIKKTFSLLESRGIAFITFYDLRDAERAKNEIQGTT 297
Query: 290 IYGKHVVIEFSRPGGHS 306
+ G+ + I FS P S
Sbjct: 298 LDGRSIDIHFSIPKEES 314
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
+ GR + F +P + + +N G I V N + + L+ F ++G +K++ T
Sbjct: 298 LDGRSIDIHFSIPKEESGIE-DNAGFIHVKN--RNLPQNELRTFFSSYGDIKDV--TEFN 352
Query: 265 KHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+ Q +EFYD+R KAL E NGQ++ + + + + P
Sbjct: 353 RDQGLVEFYDLRACEKALAEANGQKLLDQTLDLAYYTP 390
>gi|449497953|ref|XP_004174289.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q [Taeniopygia guttata]
Length = 492
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 166 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGK 225
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+++ G+++ I F++P +K A
Sbjct: 226 LERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR 282
Query: 315 SSCASSL 321
+ + +
Sbjct: 283 QAAKNQM 289
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 116 LGERITVERARGTPRG-SDQWRYGDS 140
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + +L G+ +K+ F+ +GP+ +R L + FI+F +DA +A+KE++G++
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIR---LMNNFGFIDFRKKKDAKEAVKELDGKK 64
Query: 290 IYGKHVVIEFSR-PGGHSKK 308
+ G + +E S PGG KK
Sbjct: 65 LKGARIRLEHSDGPGGSKKK 84
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LDS V L++IF +G + ++ P+ KH F++F A +A++ +N
Sbjct: 349 NNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVK-IPVGKHCGFVQFTSRSCAEEAIQMLN 407
Query: 287 GQEIYGKHVVIEFSR 301
G +I G+ + + R
Sbjct: 408 GSQIGGQKARLSWGR 422
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LDS V L++IF +G + ++ P+ KH F++F A +A++ +N
Sbjct: 318 NNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVK-IPVGKHCGFVQFTSRSCAEEAIQMLN 376
Query: 287 GQEIYGKHVVIEFSR 301
G +I G+ + + R
Sbjct: 377 GSQIGGQKARLSWGR 391
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS---- 300
L+ F+ FG ++E+ L++ F+EF D RDA A+ E+NG ++ G+ +V+E +
Sbjct: 19 LERFFEGFGRIREI---LLRRGYAFVEFDDYRDAEDAIYELNGAKLLGQRIVVEATKRPP 75
Query: 301 RPGGHSKK 308
R GG S +
Sbjct: 76 RFGGSSNR 83
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 241 SSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
+ + K++ FG +R LK F+EF + RDA A E++GQ++ G +++EF+
Sbjct: 48 THTRTKDVEYLFGRYGRIRCVELKHDYGFVEFSNPRDADDARYELDGQDVDGSRIIVEFA 107
Query: 301 R-----PGG 304
R PGG
Sbjct: 108 RGTPRGPGG 116
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
G+++ + V NL +G L+ F +GP++ + F+EF D RDA A++
Sbjct: 35 GDSETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 94
Query: 285 MNGQEIYGKHVVIEFS 300
++G+ I G V +E S
Sbjct: 95 LDGKVICGSRVRVELS 110
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVR 276
PD + T+ V NL S +L+ +F+ +G V ++ P + H + F+ F+D R
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDV-YIPREPHTKAPRGFAFVRFHDRR 66
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPG 303
DA A M+G E+ G+ + ++ +R G
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V L G +LK+ F +FG V E R +T + F+ F + DA A+ M
Sbjct: 39 LFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSM 98
Query: 286 NGQEIYGKHVVIEFS--RPGGH 305
+GQE+ G+++ + F+ RP G+
Sbjct: 99 DGQELEGRNIHVNFANERPAGN 120
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVR 276
PD + T+ V NL S +L+ +F+ +G V ++ P + H + F+ F+D R
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDV-YIPREPHTKAPRGFAFVRFHDRR 66
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPG 303
DA A M+G E+ G+ + ++ +R G
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|147900289|ref|NP_001084953.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Xenopus
laevis]
gi|47122815|gb|AAH70529.1| MGC78820 protein [Xenopus laevis]
Length = 624
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 308 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMSKVKVLFVRNLANTVTEEILEKAFGQFGK 367
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA+ EMNG+E+ G+++ I F++P +K A
Sbjct: 368 LERVKKL---KDYAFIHFDERVGAVKAMDEMNGKELEGENIEIVFAKPPDQKRKERKAQR 424
Query: 315 SSCASSL 321
+ + +
Sbjct: 425 QAAKTQM 431
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L V L+ F FG +K+L + T L + F+EF + DA +A++
Sbjct: 22 TLYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFVEFEEEDDAKEAMEN 81
Query: 285 MNGQEIYGKHVVIEFSRPGGHS 306
M+ E+YG+ + + SR GG +
Sbjct: 82 MDNAELYGRTLRVNLSRSGGFA 103
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 73 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 132
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
+YG+ + + ++ + F+ +S +N +T+Y
Sbjct: 133 HVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 174
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 201 ARGLVAGRPVW--AQFIVPTCNAV----PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGP 254
A GLV GRPV A F+ P GNN I V NL + + ++++F +G
Sbjct: 13 ALGLV-GRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGA 71
Query: 255 VKELRETPLKKHQ-----RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
+ R+ LK + F+EF D+RDA + +G + YG + +EF
Sbjct: 72 I---RDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEF 118
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 116 LGERITVERARGTPRG-SDQWRYGDS 140
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L ++ F+ FG + RE LK F+EF D RDA A+ E+N +++
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKI---REVTLKNGFGFVEFDDPRDAEDAIYELNNRDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++EF++
Sbjct: 61 MGERVIVEFAK 71
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 46.2 bits (108), Expect = 0.026, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 241 SSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
S ++ F+ +G +R+ LK F+EF D RDA A+ E+NG+++ G+ +++EFS
Sbjct: 15 SERDIEHFFRGYG---RIRDIVLKNGFGFVEFDDPRDADDAVYELNGKDLCGERIILEFS 71
Query: 301 RPGGHSKKFF 310
R G + +
Sbjct: 72 RRGPRGRGMY 81
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L + S L+ +F +G V R+ +K+ F+EF D RDA A ++G+E
Sbjct: 13 LYVGHLAARTRSRDLEHLFSKYGRV---RDVDMKRDYAFVEFSDPRDADDARHYLDGKEF 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L GV ++ F+ +G +R+ +K F+EF D RDA A+ E+NG+++
Sbjct: 6 VYIGGLPYGVKDRDIERFFKGYG---RIRDILIKNGYGFVEFDDYRDADDAVYELNGKDL 62
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 63 LGERVSVERAR 73
>gi|417411732|gb|JAA52293.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 577
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 354 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 410
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 411 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 442
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+ V NL V+ L+EIF GPV+ ++ P + Q F+E+Y++R A AL+
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 170
Query: 285 MNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPP 336
+ G++I+ + + ++ Y NS S + ST Y D P
Sbjct: 171 LGGRKIFDTEIRVNWA----------YQNSQSNVKE-DLSTHYHVFVGDLSP 211
>gi|150866142|ref|XP_001385635.2| hypothetical protein PICST_84754 [Scheffersomyces stipitis CBS
6054]
gi|149387398|gb|ABN67606.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 246
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQR--FIEFYDVRDAAK 280
N ++ NLD V+ + E+F F P++ L ++ LK HQ F+EF VRDA
Sbjct: 14 NIDASLYFGNLDPEVTELIMYELFIQFAPLRYLNMPKDRILKTHQGYGFVEFRTVRDADY 73
Query: 281 ALKEMNGQEIYGKHVVIEFSRP 302
AL + G +YGK + I+ + P
Sbjct: 74 ALDILRGVRLYGKQLKIKKAEP 95
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 24 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 82
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 83 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 116
>gi|395534549|ref|XP_003769303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Sarcophilus
harrisii]
Length = 605
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKE 284
T+ V L+ S S +K F+A+GP+K +R K + FIE+ RD A K+
Sbjct: 140 TLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQ 199
Query: 285 MNGQEIYGKHVVIEFSR 301
+G+++ K V+++ R
Sbjct: 200 ADGRKVDNKRVLVDVER 216
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V NL G++ L E F G VK +R E+ K ++EF DV A KA
Sbjct: 434 TLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAA 493
Query: 285 MNGQEIYGKHVVIEFSRP 302
M G E+ G+ V ++FS+P
Sbjct: 494 MQGVELDGRSVRLDFSQP 511
>gi|393785537|ref|ZP_10373687.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
gi|392662292|gb|EIY55856.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 46.2 bits (108), Expect = 0.028, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
I V NL+ V + L+++ + +G V + RET K FIE D A+KA+ E+
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGTVSSVKVIMDRETGRSKGFAFIEMEDDAAASKAIAEL 62
Query: 286 NGQEIYGKHVVIEFSRP 302
NG E +G+ +V++ ++P
Sbjct: 63 NGAEYHGRTMVVKEAKP 79
>gi|348520155|ref|XP_003447594.1| PREDICTED: hypothetical protein LOC100696008 [Oreochromis
niloticus]
Length = 575
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D ++ + V NL + L IF+ +G V + + F+ A +A++
Sbjct: 2 DKSHTVKLFVGNLALDTTQEELSAIFEPYGQVVSCS---VLRQFAFVHLQGEGAAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPGG-HSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR HS K F N S ++ + ++QT
Sbjct: 59 ELNGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQQLFQT 105
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDAAK 280
N TI V LD VS S L E+F GPV + R+ + HQ F+EF DA
Sbjct: 10 NQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADY 69
Query: 281 ALKEMNGQEIYGK 293
A+K MN ++YGK
Sbjct: 70 AIKIMNMIKLYGK 82
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 221 AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDV 275
++ D + T+ V NL V+ + ++F A GP K + + +H F+EFYD
Sbjct: 106 SMEDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKM--ISEHAGNDPYCFVEFYDH 163
Query: 276 RDAAKALKEMNGQEIYGKHVVIEF-SRPGGHSK 307
A+ AL MNG++I K V + + + P G+ K
Sbjct: 164 NHASAALTAMNGRKIMHKEVKVNWATTPSGNKK 196
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 189 IMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEI 248
I ++A PPP + + + ++ C A P T+ + G++ ++
Sbjct: 273 IRTNWATRKPPPPKSNEGQKQLSYDEVL--CQASPTNT---TVYCGGITKGLTEDLMRNT 327
Query: 249 FQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
F FGP++E+R P K + FI F+ AA A+ +NG +I G+ V + +
Sbjct: 328 FSNFGPIQEIRVFPEKGYS-FIRFFSHEVAAMAIVTVNGTQIEGQAVKCSWGK 379
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 25/171 (14%)
Query: 140 REQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP 199
R+ QL Q +G P S M+ + N+ YD+ + +L MN
Sbjct: 123 RQVTEQLILQLFGAIGPCKSCKMISEHAGNDPYCFVEFYDHNHASAALTAMN-------- 174
Query: 200 PARGLVAGRPVWAQFIVPTCNAVPDGNNQGT-----IVVFNLDSGVSSSTLKEIFQAFGP 254
GR + + + P GN + T + V +L + ++ LK F FG
Sbjct: 175 -------GRKIMHKEVKVNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTDLKAAFAPFGK 227
Query: 255 VKELR-----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
+ + R +T + F+ F + DA A+ M+GQ + G+ + ++
Sbjct: 228 ISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWA 278
>gi|294659049|ref|XP_461388.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
gi|202953578|emb|CAG89795.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
Length = 252
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQR--FIEFYDVRDA 278
D N + ++ NLD V+ L E+F F P++ L ++ LK HQ FIEF ++DA
Sbjct: 12 DRNVKASLYFGNLDPQVTEPLLYELFIQFAPIRSLNLPKDRVLKTHQGYGFIEFRTIKDA 71
Query: 279 AKALKEMNGQEIYGKHVVIEFSRP 302
L + G +YGK + ++ + P
Sbjct: 72 EYVLNILRGIRLYGKMLKLKKAEP 95
>gi|146422279|ref|XP_001487080.1| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 221 AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDV 275
A D N + T+ V NLD V+ + L E+ F P++ L ++ L HQ F+EF +
Sbjct: 9 ADADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVLGTHQGYGFVEFRGI 68
Query: 276 RDAAKALKEMNGQEIYGKHVVIEFSRP---GGHSKKFFYANSSSCASSLN 322
DA L+ + G +YGK + + + P G +AN++S ++++
Sbjct: 69 EDANYVLEILRGVRLYGKSLKLRRADPNSRGAAGTTSNFANNNSVTNAVD 118
>gi|426353899|ref|XP_004044412.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 464
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 241 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 297
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 298 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 329
>gi|384493187|gb|EIE83678.1| hypothetical protein RO3G_08383 [Rhizopus delemar RA 99-880]
Length = 163
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N++ V ++++F +G +++L L+ F+EF DVRDA A KE++G ++
Sbjct: 26 LYVGNVNRYVREKDIRDLFSRYGRIRDL---ILRNFYAFVEFDDVRDADDACKELDGYKL 82
Query: 291 YGKHVVI 297
G +++
Sbjct: 83 EGDRIIV 89
>gi|223649064|gb|ACN11290.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 631
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
V G PV ++ P PD + ++ V L V+ L++ F AFG ++ +++
Sbjct: 318 VWGNPVTVEWADPVAEPDPDVMAKVKVLFVRKLAIPVTEELLEKTFSAFGKLERVKKL-- 375
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
K F+ F D A KA+ EMNG+E+ G+ + I ++P +K
Sbjct: 376 -KDYAFVHFEDRDAAVKAMAEMNGKELGGEGIEIVLAKPPDKKRK 419
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
P+ N T V NLD VS L E+F GPV + R T L + FIEF
Sbjct: 18 APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEE 77
Query: 277 DAAKALKEMNGQEIYGKHVVI 297
DA A+K +N ++YGK + +
Sbjct: 78 DADYAIKVLNMIKLYGKPIRV 98
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LDS V+ L++IF G + ++ P+ KH F++F A +A++ +N
Sbjct: 15 NNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVK-IPVGKHCGFVQFTSRSCAEEAIQMLN 73
Query: 287 GQEIYGKHVVIEFSR 301
G +I G+ V + + R
Sbjct: 74 GSQIGGQKVRLSWGR 88
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 246 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 304
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 305 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 338
>gi|156380790|ref|XP_001631950.1| predicted protein [Nematostella vectensis]
gi|156218999|gb|EDO39887.1| predicted protein [Nematostella vectensis]
Length = 135
Score = 46.2 bits (108), Expect = 0.029, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 236 LDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHV 295
L G + ++ F+++G LR+ LK + F+EF D RDA A+ E NG+E+ G+ +
Sbjct: 10 LPYGTTEDDVRRFFRSYG---RLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLGERI 66
Query: 296 VIE 298
++E
Sbjct: 67 LVE 69
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------RFIEFYDVRDAAKALK 283
TIVV L TLK+ F+ +GP+K +R + +H FIE+ + RD AL+
Sbjct: 121 TIVVSRLSYKTDEKTLKKEFEVYGPIKRVR-IIIDQHSGKPKGYAFIEYDNERDFQLALE 179
Query: 284 EMNGQEIYGKHVVIEFSR 301
NG+ + G VV+++ R
Sbjct: 180 RGNGRRVDGARVVVDYER 197
>gi|167392627|ref|XP_001740231.1| poly(A) binding protein [Entamoeba dispar SAW760]
gi|165895743|gb|EDR23363.1| poly(A) binding protein, putative [Entamoeba dispar SAW760]
Length = 289
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR--------FIEFYDVRDAAKA 281
T+ V ++D + + LKE+F +G V + +KK + FIE+ DAAKA
Sbjct: 3 TLYVSDVDVSIDENKLKELFSPYGNVIN---STIKKSSKGTNDFYYAFIEYDRPEDAAKA 59
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
L EM+ E+ GK + ++F++P
Sbjct: 60 LHEMDQHELAGKRLNVKFAKP 80
>gi|425774154|gb|EKV12471.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum PHI26]
gi|425778407|gb|EKV16535.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum Pd1]
Length = 152
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETP--LKKHQRF--IEFYDVRDAAKA 281
T+ V LD GV++ TL E F FG V ++ E P + H+ F +EF +DA +A
Sbjct: 10 TVYVGGLDQGVTAHTLAEAFIPFGEVVDISLPKPEQPNSAEIHRGFGYVEFDLPQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+G EIYG+ + + ++P
Sbjct: 70 IDNMDGSEIYGRTIKVAAAKP 90
>gi|33416526|gb|AAH55863.1| Syncrip protein, partial [Mus musculus]
Length = 667
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 384 LFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 440
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 441 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 471
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G L+ F+ +G R+ +K F+EF D RDA A+ E+NG+E+
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYG---RFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 291 YGKHVVIEFSR--PGGHSKKFFYANS 314
G+ + +E +R P G S ++ Y +S
Sbjct: 116 LGERITVERARGTPRG-SDQWRYGDS 140
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
I V NL +S L++ F FG + + LK +R FIE+ D+RDA A+++M
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNV---ILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 286 NGQEIYGKHVVIEFSRPG 303
+G+E++G + +E SR G
Sbjct: 84 HGKELHGAEIRVEISRNG 101
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 46.2 bits (108), Expect = 0.029, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N + + N+ +++ F+ +G +LRE LK F+EF D RDA A+++++
Sbjct: 4 NHHRLYLGNISDDTRERDVEKFFKGYG---KLREVALKNGYGFVEFEDHRDADDAVQDLD 60
Query: 287 GQEIYGKHVVIEFSR 301
G+++ G V +EF+R
Sbjct: 61 GKDMNGSRVRVEFAR 75
>gi|228008396|ref|NP_001153145.1| heterogeneous nuclear ribonucleoprotein Q isoform 2 [Homo sapiens]
gi|332218415|ref|XP_003258351.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778173|ref|XP_003431697.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Canis lupus familiaris]
gi|358413804|ref|XP_003582661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Bos taurus]
gi|359068807|ref|XP_003586521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Bos taurus]
gi|426234732|ref|XP_004011346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Ovis aries]
gi|119569008|gb|EAW48623.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_b [Homo sapiens]
gi|221042908|dbj|BAH13131.1| unnamed protein product [Homo sapiens]
gi|380783243|gb|AFE63497.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
Length = 464
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 241 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 297
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 298 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 329
>gi|347838217|emb|CCD52789.1| similar to u2 small nuclear ribonucleoprotein b'' [Botryotinia
fuckeliana]
Length = 252
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 229 GTIVVFNLDSGVSSSTL----KEIFQAFGPVKEL-RETPLK-KHQRFIEFYDVRDAAKAL 282
T+ V NL+ + + L E+F +G + E+ +T LK K Q FI F DV A KA+
Sbjct: 15 ATLYVNNLEESIKPAALIEALTELFSEYGTILEIVAKTNLKAKGQAFIVFEDVESATKAI 74
Query: 283 KEMNGQEIYGKHVVIEFS---------RPGGHSK 307
+++ G E++GK + I ++ R GGH +
Sbjct: 75 EDIQGFELFGKEMRIAYAKTRSDASVKREGGHEE 108
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 55/228 (24%)
Query: 85 LVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLME-----GIVTVHFYDLRHAEMAFKEI 139
L + + +V E +RR+ E FGE+ GV++ E G V + D A+ A++
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 140 REQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQVVAESLMIMNSYAPVLPP 199
++ + + + P + N+ AP
Sbjct: 293 KDAEIDGRTINLDYAKPRDA-------------------------------NNQAPREKA 321
Query: 200 PARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR 259
R G P+ N T+ V NL GV + ++E+F+ G ++ +R
Sbjct: 322 QNRARSFG-----------DQTSPESN---TLFVGNLVFGVDENAVREVFEGQGQIQGIR 367
Query: 260 -----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
ET K ++EF V +A +AL ++ G +I G+ + ++FS P
Sbjct: 368 LPTDAETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLDFSTP 415
>gi|3037013|gb|AAC12926.1| Gry-rbp [Homo sapiens]
gi|15809586|gb|AAK59703.1| hnRNP Q3 [Homo sapiens]
Length = 623
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ L+++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 267 NNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVK-IPAGKRCGFVQFADRSCAEEALRVLN 325
Query: 287 GQEIYGKHVVIEFSR 301
G + G++V + + R
Sbjct: 326 GTLLGGQNVRLSWGR 340
>gi|66810087|ref|XP_638767.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467393|gb|EAL65424.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 293
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
I V NL V SSTL+ F FG V +R +KK + F++ D+ A KA+ +
Sbjct: 19 IFVGNLTENVESSTLETAFAEFGKVLSVR--IIKKKFKSNTFGFVDMEDLETANKAVAAI 76
Query: 286 NGQEIYGKHVVIEFSRPGGHSKK 308
NG+E GK V +E +R K
Sbjct: 77 NGREFDGKQVNVEIAREKSTESK 99
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V NL + TL E F +G +K +R ET K ++EF D+ + KA +
Sbjct: 146 LFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGA 205
Query: 286 NGQEIYGKHVVIEFSRP 302
G E+ G+++ ++FS+P
Sbjct: 206 AGAEVAGRNIRVDFSQP 222
>gi|351702127|gb|EHB05046.1| Heterogeneous nuclear ribonucleoprotein Q [Heterocephalus glaber]
Length = 623
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + + ++F GP K + +T F+EF++ R AA +L MN
Sbjct: 9 TLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAMN 68
Query: 287 GQEIYGKHVVIEFSRPGGHSKK 308
G++I GK V + ++ KK
Sbjct: 69 GRKIMGKEVKVNWATSPSSQKK 90
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
G+++ + V NL +G L+ F +GP++ + F+EF D RDA A++
Sbjct: 36 GDSETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 95
Query: 285 MNGQEIYGKHVVIEFS 300
++G+ I G V +E S
Sbjct: 96 LDGKVICGSRVRVELS 111
>gi|426353905|ref|XP_004044415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 623
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|301775589|ref|XP_002923215.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Ailuropoda melanoleuca]
Length = 626
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 342 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 398
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 399 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 430
>gi|115462709|ref|NP_001054954.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|55733832|gb|AAV59339.1| unknown protein [Oryza sativa Japonica Group]
gi|113578505|dbj|BAF16868.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|215741183|dbj|BAG97678.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 104
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL----RETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ V NL +LK+ F +G V RET + F+ F D + A+ A+K MN
Sbjct: 25 VYVGNLPYRADERSLKDSFSNYGAVSSEIAVDRETGRSRGFGFVSFQDSKSASDAIKGMN 84
Query: 287 GQEIYGKHVVIEFSRP 302
GQ+I G++V+++ ++P
Sbjct: 85 GQDIGGRNVIVQEAQP 100
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G + E+ LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEI---DLKNGYGFVEFEDNRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|228008291|ref|NP_006363.4| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Homo sapiens]
gi|302564259|ref|NP_001180774.1| heterogeneous nuclear ribonucleoprotein Q [Macaca mulatta]
gi|109071945|ref|XP_001089294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 8
[Macaca mulatta]
gi|291396562|ref|XP_002714605.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 1 [Oryctolagus cuniculus]
gi|301775585|ref|XP_002923213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Ailuropoda melanoleuca]
gi|332218419|ref|XP_003258353.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778171|ref|XP_532223.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Canis lupus familiaris]
gi|348578326|ref|XP_003474934.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Cavia porcellus]
gi|358413806|ref|XP_002705232.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|359068810|ref|XP_002690247.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|395737457|ref|XP_003776919.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Pongo abelii]
gi|397504636|ref|XP_003822890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3 [Pan
paniscus]
gi|402867572|ref|XP_003897917.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Papio anubis]
gi|403261187|ref|XP_003923009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Saimiri
boliviensis boliviensis]
gi|426234730|ref|XP_004011345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ovis aries]
gi|92090361|sp|O60506.2|HNRPQ_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein
gi|62897111|dbj|BAD96496.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant
[Homo sapiens]
gi|119569014|gb|EAW48629.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|119569015|gb|EAW48630.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|261858370|dbj|BAI45707.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
gi|281344763|gb|EFB20347.1| hypothetical protein PANDA_012313 [Ailuropoda melanoleuca]
gi|387539924|gb|AFJ70589.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|431838171|gb|ELK00103.1| Heterogeneous nuclear ribonucleoprotein Q [Pteropus alecto]
gi|440903331|gb|ELR54008.1| Heterogeneous nuclear ribonucleoprotein Q [Bos grunniens mutus]
Length = 623
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|197692203|dbj|BAG70065.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
gi|197692451|dbj|BAG70189.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
Length = 135
Score = 46.2 bits (108), Expect = 0.031, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|189069313|dbj|BAG36345.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|426391711|ref|XP_004062211.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Gorilla gorilla gorilla]
gi|221043204|dbj|BAH13279.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 46.2 bits (108), Expect = 0.031, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|383415175|gb|AFH30801.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|384944782|gb|AFI35996.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|410227736|gb|JAA11087.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255524|gb|JAA15729.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304910|gb|JAA31055.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 624
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G + E+ LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEI---DLKNGYGFVEFEDNRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 218 TCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK-----KHQRFIEF 272
T A DG + ++V N+ S S L+E+F +FG +K LR+ P K + F+E+
Sbjct: 539 TARAEEDGEKRTKLLVRNVPFEASRSELRELFGSFGQLKSLRQ-PKKFDGTSRGFAFVEY 597
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
DA A+K + + G+ +V+E+++
Sbjct: 598 VSSDDAKTAIKALASTHLLGRKLVVEYAK 626
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVR 276
PD + T+ V NL S +L+ +F+ +G V ++ P + H + F+ F+D R
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDV-YIPREPHTKAPRGFAFVRFHDQR 66
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPG 303
DA A M+G E+ G+ + ++ +R G
Sbjct: 67 DAEDAEAAMDGAELDGRELRVQVARYG 93
>gi|407835043|gb|EKF99127.1| hypothetical protein TCSYLVIO_009959 [Trypanosoma cruzi]
Length = 871
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------------RF 269
VP G + +VV N+ + ++++F AF ++ +R P K HQ F
Sbjct: 777 VPPGCDALKLVVKNVPFEATERDIRDLFSAFSEIRSVR-LPRKSHQFSSHRENNHRGFAF 835
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+EF +A +AL+ + +YG+H+V+++++ G
Sbjct: 836 VEFLSEEEAKRALETLKATHLYGRHLVLQYAKLDGQ 871
>gi|350578257|ref|XP_001927626.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Sus
scrofa]
Length = 623
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ L+++F +G + ++ P K F++F D A +A++ +N
Sbjct: 257 NNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVK-IPSGKRCGFVQFSDRSSAEEAIRVLN 315
Query: 287 GQEIYGKHVVIEFSR 301
G + G++V + + R
Sbjct: 316 GTLLGGQNVRLSWGR 330
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD VS + + E+F GPV + R T L + F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK I ++ H+K
Sbjct: 66 DADYAIKVMNMIKVYGK--PIRVNKASAHNKNL 96
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S L+ +F +G +RE LK+ FIEF D DA A ++G+E+
Sbjct: 13 LYVGRLAPRTRSRDLEYLFSKYG---RIREVELKRDYAFIEFSDPHDADDAQYNLDGREV 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|126310303|ref|XP_001366745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Monodelphis domestica]
Length = 623
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|15809590|gb|AAK59705.1| hnRNP Q1 [Homo sapiens]
Length = 561
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|344264671|ref|XP_003404415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Loxodonta africana]
Length = 620
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 337 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 393
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 394 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 424
>gi|326916225|ref|XP_003204410.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Meleagris gallopavo]
Length = 562
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+++ G+++ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSL 321
+ + +
Sbjct: 421 QAAKNQM 427
>gi|149637545|ref|XP_001510103.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Ornithorhynchus anatinus]
Length = 623
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+++ G+++ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSL 321
+ + +
Sbjct: 421 QAAKNQM 427
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V L G S+LKE F +G V E R +T + FI F +AA AL+ M
Sbjct: 42 LFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAM 101
Query: 286 NGQEIYGKHVVIEFS 300
+GQ+++G+ + + ++
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAA 279
G N+ I V NL + + ++++F FG V K R P F+EF D RDA
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDNRDAD 59
Query: 280 KALKEMNGQEIYGKHVVIEFSRPGG 304
A+K +G + G + +EF R GG
Sbjct: 60 DAVKARDGYDYDGYRLRVEFPRGGG 84
>gi|148694590|gb|EDL26537.1| mCG16769, isoform CRA_c [Mus musculus]
Length = 612
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 390 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 446
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 447 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 478
>gi|432920249|ref|XP_004079910.1| PREDICTED: uncharacterized protein LOC101158309 [Oryzias latipes]
Length = 564
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D ++ + V NL + L IF+ +G V + + F+ A +A++
Sbjct: 2 DKSHTVKLFVGNLALDTTQEELSAIFEPYGQVVSCS---VLRQFAFVHLQGEGAAERAIR 58
Query: 284 EMNGQEIYGKHVVIEFSRPGG---HSKKFFYANSSSCASSLNYSTIYQT 329
E+NG+E G+++V+E SR G HS K F N S ++ + ++QT
Sbjct: 59 ELNGREFRGRNLVVEESR--GRPLHSTKVFVGNLSGMCTTEDLQQLFQT 105
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 211 WAQFIVPT-----CNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKK 265
++QFI+PT N+ D NN T+ V +L V+ + LK FQ FG V + P K
Sbjct: 257 FSQFILPTQQLPPLNSFTDRNNT-TLFVSSLSHMVTENELKAFFQPFGNVIYAK-LPENK 314
Query: 266 HQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
F+++ D A A+ ++ G I G + I + RP
Sbjct: 315 QCGFVQYVDRASAEMAILKLQGFPIRGSRIKISWGRP 351
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V NL GV+ T+ F +G VK +R ET K ++EF D+ A KA +
Sbjct: 100 TLFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEA 158
Query: 285 MNGQEIYGKHVVIEFSRP 302
NG EI G+ + +++S+P
Sbjct: 159 ANGSEIEGRSIRLDYSQP 176
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 45.8 bits (107), Expect = 0.034, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKAL 282
+GT+ + N+ + ++L+++F GPV+EL R+T K F+EF D A A+
Sbjct: 3 EGTVFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAV 62
Query: 283 KEMNGQEIYGKHVVIE 298
+ +NG+E G+ + ++
Sbjct: 63 RNVNGREYNGRQLRVD 78
>gi|426353897|ref|XP_004044411.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 562
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|21356157|ref|NP_651968.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|5679350|gb|AAD46930.1|AF172637_1 LD24793p [Drosophila melanogaster]
gi|7298863|gb|AAF54070.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|220953584|gb|ACL89335.1| Aly-PA [synthetic construct]
Length = 266
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV- 275
P AV G+ ++V NLD GVS++ +KE+F FGP+K+ + R + DV
Sbjct: 97 PKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKA-AVHYDRSGRSLGTADVI 155
Query: 276 ----RDAAKALKEMNGQEIYGKHVVIEFS 300
DA KA+K+ +G + G+ + I+ +
Sbjct: 156 FERRADALKAIKQYHGVPLDGRPMTIQLA 184
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
I V NL +S L++ F FG + + LK +R FIE+ D+RDA A+++M
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNV---ILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 286 NGQEIYGKHVVIEFSRPG 303
+G+E++G + +E SR G
Sbjct: 84 HGKELHGAEIRVEISRNG 101
>gi|291396564|ref|XP_002714606.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 2 [Oryctolagus cuniculus]
Length = 563
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 340 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 396
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 397 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 428
>gi|126306127|ref|XP_001362774.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Monodelphis domestica]
Length = 561
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|5031512|gb|AAD38198.1|AF155568_1 NSAP1 protein [Homo sapiens]
Length = 562
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|407393203|gb|EKF26533.1| hypothetical protein MOQ_009766 [Trypanosoma cruzi marinkellei]
Length = 878
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------------RF 269
VP G + +VV N+ + ++++F AF ++ +R P K HQ F
Sbjct: 784 VPPGCDALKLVVKNVPFEATERDIRDLFSAFSEIRSVR-LPRKSHQFSSHRENNHRGFAF 842
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+EF +A +AL+ + +YG+H+V+++++ G
Sbjct: 843 VEFLSEEEAKRALETLKATHLYGRHLVLQYAKLDGQ 878
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + +L V + F+ +G V ++ LK F+EF D RDA A+K++NG+E+
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIH---LKNGFGFVEFEDHRDADDAIKDLNGKEL 61
Query: 291 YGKHVVIEFSR-----PGG 304
G+ V +E + PGG
Sbjct: 62 LGERVSVELAHGSRRGPGG 80
>gi|345326436|ref|XP_003431043.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 562
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 304 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGK 363
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++EMNG+++ G+++ I F++P +K A
Sbjct: 364 LERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR 420
Query: 315 SSCASSL 321
+ + +
Sbjct: 421 QAAKNQM 427
>gi|228008293|ref|NP_001153148.1| heterogeneous nuclear ribonucleoprotein Q isoform 5 [Homo sapiens]
gi|390461868|ref|XP_003732753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Callithrix
jacchus]
gi|119569009|gb|EAW48624.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_c [Homo sapiens]
Length = 561
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|228008400|ref|NP_001153149.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Homo sapiens]
gi|296198708|ref|XP_002746830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Callithrix jacchus]
gi|301775581|ref|XP_002923211.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Ailuropoda melanoleuca]
gi|332218413|ref|XP_003258350.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778175|ref|XP_003431698.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Canis lupus familiaris]
gi|348578328|ref|XP_003474935.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Cavia porcellus]
gi|358413802|ref|XP_589161.5| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Bos
taurus]
gi|359068803|ref|XP_002690248.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Bos
taurus]
gi|395737455|ref|XP_003776918.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Pongo abelii]
gi|397504632|ref|XP_003822888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Pan
paniscus]
gi|402867568|ref|XP_003897915.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Papio anubis]
gi|426234728|ref|XP_004011344.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Ovis aries]
gi|119569010|gb|EAW48625.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_d [Homo sapiens]
gi|119569011|gb|EAW48626.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_d [Homo sapiens]
gi|380783245|gb|AFE63498.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|383409779|gb|AFH28103.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|384940996|gb|AFI34103.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|410227734|gb|JAA11086.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255522|gb|JAA15728.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304908|gb|JAA31054.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 562
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|114145636|ref|NP_001041381.1| heterogeneous nuclear ribonucleoprotein Q [Rattus norvegicus]
gi|44888314|sp|Q7TP47.1|HNRPQ_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Liver regeneration-related
protein LRRG077; AltName: Full=Synaptotagmin-binding,
cytoplasmic RNA-interacting protein
gi|33086582|gb|AAP92603.1| Ab2-339 [Rattus norvegicus]
Length = 533
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 249 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 305
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 306 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 337
>gi|395857930|ref|XP_003801333.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Otolemur garnettii]
Length = 562
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|154309069|ref|XP_001553869.1| hypothetical protein BC1G_07429 [Botryotinia fuckeliana B05.10]
Length = 157
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 229 GTIVVFNLDSGVS----SSTLKEIFQAFGPVKEL-RETPLK-KHQRFIEFYDVRDAAKAL 282
T+ V NL+ + L E+F +G + E+ +T LK K Q FI F DV A KA+
Sbjct: 15 ATLYVNNLEESIKPAALIEALTELFSEYGTILEIVAKTNLKAKGQAFIVFEDVESATKAI 74
Query: 283 KEMNGQEIYGKHVVIEFS---------RPGGHSK 307
+++ G E++GK + I ++ R GGH +
Sbjct: 75 EDIQGFELFGKEMRIAYAKTRSDASVKREGGHEE 108
>gi|71423762|ref|XP_812563.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877357|gb|EAN90712.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 879
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ------------RF 269
VP G + +VV N+ + ++++F AF ++ +R P K HQ F
Sbjct: 785 VPPGCDALKLVVKNVPFEATERDIRDLFSAFSEIRSVR-LPRKSHQFSSHRENNHRGFAF 843
Query: 270 IEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+EF +A +AL+ + +YG+H+V+++++ G
Sbjct: 844 VEFLSEEEAKRALETLKATHLYGRHLVLQYAKLDGQ 879
>gi|444729721|gb|ELW70128.1| Heterogeneous nuclear ribonucleoprotein Q [Tupaia chinensis]
Length = 659
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 376 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 432
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 433 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 463
>gi|426234734|ref|XP_004011347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Ovis aries]
Length = 410
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 187 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 243
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 244 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 275
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|209880680|ref|XP_002141779.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557385|gb|EEA07430.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 313
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 232 VVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+V N+ + L+E+ A GPV +R +T L + F E+ D+ A+K +N
Sbjct: 5 IVGNVAFDATEDELREVMSAVGPVLSIRIVYDKDTGLSRGFSFCEYRDIETCIMAIKNLN 64
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G E+ G+ + ++++ P S+
Sbjct: 65 GYELRGRAIRVDWTSPDMRSR 85
>gi|198455576|ref|XP_001360055.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
gi|198133305|gb|EAL29208.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
Length = 284
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 201 ARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRE 260
ARG V + P A G+ ++V NLD GVS+S +KE+F FGP+K+
Sbjct: 94 ARGDVNSAWKHDMYDGPKRGAPSSGSGPTLLIVNNLDYGVSNSDIKELFNEFGPIKKA-A 152
Query: 261 TPLKKHQRFIEFYDV-----RDAAKALKEMNGQEIYGKHVVIEFS 300
+ R + DV DA KA+K+ NG + G+ + I+ +
Sbjct: 153 VHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLA 197
>gi|195158116|ref|XP_002019940.1| GL12678 [Drosophila persimilis]
gi|194116531|gb|EDW38574.1| GL12678 [Drosophila persimilis]
Length = 284
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 201 ARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRE 260
ARG V + P A G+ ++V NLD GVS+S +KE+F FGP+K+
Sbjct: 94 ARGDVNSAWKHDMYDGPKRGAPSSGSGPTLLIVNNLDYGVSNSDIKELFNEFGPIKKA-A 152
Query: 261 TPLKKHQRFIEFYDV-----RDAAKALKEMNGQEIYGKHVVIEFS 300
+ R + DV DA KA+K+ NG + G+ + I+ +
Sbjct: 153 VHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLA 197
>gi|159164094|pdb|2DGU|A Chain A, Solution Structure Of The Rna Binding Domain In
Heterogeneous Nuclear Ribonucleoprotein Q
Length = 103
Score = 45.8 bits (107), Expect = 0.035, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 14 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 70
Query: 291 YGKHVVIEFSRPGGHSKK 308
G+++ I F++P +K
Sbjct: 71 EGENIEIVFAKPPDQKRK 88
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|451993269|gb|EMD85743.1| hypothetical protein COCHEDRAFT_1187580 [Cochliobolus
heterostrophus C5]
Length = 827
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L +P DV+E +R DL FG + V++ R
Sbjct: 260 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDVTEDELREDLSKFGPIDTVKIVR-E 317
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 318 KAIGFVHFLSIGNAIKAVSQLPQEPKWQAPRRVYYGKDRCAYVSKTQQQN---------- 367
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 368 -------AAQYLGIAPGYAHVLNGADRDMISNALAQQSVAAAAVATSAGGVNNLGNRTVY 420
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 421 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 478
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 479 HNRRLKIGWGKHSG 492
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + V NL +G L+ F +GP++ + F+EF D RDA A++ ++
Sbjct: 9 GEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLD 68
Query: 287 GQEIYGKHVVIEFS 300
G+ I G V +E S
Sbjct: 69 GKVICGSRVRVELS 82
>gi|410911698|ref|XP_003969327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Takifugu
rubripes]
Length = 629
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
V G PV ++ P P+ + ++ V NL + V+ L++ F FG ++ +++
Sbjct: 314 VWGNPVTVEWADPVAEPDPEVMAKVKVLFVRNLATAVTEELLEKTFAQFGKLERVKKL-- 371
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
K F+ F + A +A+ EMNG+E+ G+ + I ++P +K
Sbjct: 372 -KDYAFVHFEERDAAVRAMDEMNGKEVGGEEIEIVLAKPPDKKRK 415
>gi|37589144|gb|AAH58807.1| Syncrip protein, partial [Mus musculus]
Length = 635
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 412 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 468
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 469 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 500
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|413921567|gb|AFW61499.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 185
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
IYG+ + + ++ + F+ +S +N +T+Y
Sbjct: 134 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 175
>gi|359338991|ref|NP_001240700.1| heterogeneous nuclear ribonucleoprotein Q isoform 7 [Homo sapiens]
gi|426353901|ref|XP_004044413.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
gi|441601143|ref|XP_004087662.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|119569007|gb|EAW48622.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_a [Homo sapiens]
Length = 410
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 187 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 243
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 244 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 275
>gi|62087776|dbj|BAD92335.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant
[Homo sapiens]
Length = 534
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 311 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 367
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 368 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 399
>gi|359322752|ref|XP_003639909.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Canis
lupus familiaris]
Length = 135
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|340504267|gb|EGR30725.1| splicing arginine serine-rich 6, putative [Ichthyophthirius
multifiliis]
Length = 371
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 245 LKEIFQAFGPVKELR-ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
L+ +F +G ++E++ ++ + FIEF D RDA AL+E N E GK + IEF G
Sbjct: 13 LENLFIKYGKIREIKIKSKGANNYGFIEFEDQRDAKDALEECNNLEFKGKQLRIEFGH-G 71
Query: 304 GHSKKF 309
G K+
Sbjct: 72 GRRKRL 77
>gi|395857934|ref|XP_003801335.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Otolemur garnettii]
Length = 410
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 187 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 243
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 244 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 275
>gi|71894995|ref|NP_001026254.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Gallus
gallus]
gi|53129801|emb|CAG31416.1| hypothetical protein RCJMB04_6c17 [Gallus gallus]
Length = 448
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 225 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 281
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 282 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 313
>gi|26454828|gb|AAH40844.1| SYNCRIP protein [Homo sapiens]
Length = 410
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 187 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 243
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 244 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 275
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIE 271
P N G+ T+ V + S S LK F +GP+K++R T K FIE
Sbjct: 86 PHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTGKPKGYAFIE 145
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
F RD A K+ +GQ+I + V+++ R
Sbjct: 146 FEKERDMKIAYKQADGQKIDDRRVLVDIER 175
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGALLDGRELRVQMARYG 93
>gi|410959606|ref|XP_004001668.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q [Felis catus]
Length = 562
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|119569012|gb|EAW48627.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_e [Homo sapiens]
Length = 588
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N TI V NLD V+ L+++F +G + ++ P K F++F D A +AL+ +N
Sbjct: 263 NNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVK-IPAGKRCGFVQFADRSCAEEALRVLN 321
Query: 287 GQEIYGKHVVIEFSR 301
G + G++V + + R
Sbjct: 322 GTLLGGQNVRLSWGR 336
>gi|326916227|ref|XP_003204411.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Meleagris gallopavo]
Length = 448
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 225 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 281
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 282 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 313
>gi|429856547|gb|ELA31452.1| negative regulator of differentiation 1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 709
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
VG+ + P+ V L +G +R + L +P D++E +R DL FG V +++ R
Sbjct: 192 VGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDITEEELREDLGKFGAVDTIKIVR-E 249
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I +HF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 250 KSIAFIHFLSIANAIKAVSQLPQEPKWQAPRRVYYGKDRCAYVSKTQQQN---------- 299
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA +L R L++ G NN G ++
Sbjct: 300 -------AAQYLGIAPGYAHMLTGADRDLISNALAQQSVAAAAVATTAGGINNLGNRTIY 352
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 353 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMI 410
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 411 HNRRLKIGWGKHSG 424
>gi|47219493|emb|CAG10857.1| unnamed protein product [Tetraodon nigroviridis]
Length = 629
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
V G PV ++ P P+ + ++ V NL + V+ L++ F FG ++ +++
Sbjct: 314 VWGNPVTVEWADPVAEPDPEVMAKVKVLFVRNLATAVTEELLEKTFAQFGKLERVKKL-- 371
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
K F+ F + A +A+ EMNG+E+ G+ + I ++P +K
Sbjct: 372 -KDYAFVHFEERDAAVRAMDEMNGKEVGGEEIEIVLAKPPDKKRK 415
>gi|344264673|ref|XP_003404416.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Loxodonta africana]
Length = 559
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 336 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 392
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 393 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 424
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEM 285
N + V +L +G + L+ F +GP++ + F+E+ D RDA A+K M
Sbjct: 12 NTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGM 71
Query: 286 NGQEIYGKHVVIEFSRPGGHSKKFFYANSS 315
+G+ + G + +E S G S+K Y S
Sbjct: 72 DGKVLCGARIRVELS--TGMSRKSRYGRPS 99
>gi|194216234|ref|XP_001915169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Equus caballus]
Length = 623
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQ 288
+ V NL + V+ L++ F FG ++ +++ K FI F D RD A KA++EMNG+
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHF-DERDGAVKAMEEMNGK 394
Query: 289 EIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
++ G+++ I F++P +K A + + + Y Y
Sbjct: 395 DLEGENIEIVFAKPPDQKRKERKAQRQAAKNQM-YDDYY 432
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
K+I + FG +L E LK F+EF D RDA A+ E+NG+++ G+ V++E +R
Sbjct: 16 KDIQRFFGGYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 223 PDG--NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVR 276
PDG + TI V NL V++ LK F GPV+ +R + K +++F+DV
Sbjct: 133 PDGYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYRGVSKGFGYVKFHDVE 192
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSR 301
A KA+ M+GQ G+H+ + F+R
Sbjct: 193 TAEKAVALMHGQLFEGRHLAVNFAR 217
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 260 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 318
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 319 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 352
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|15809588|gb|AAK59704.1| hnRNP Q2 [Homo sapiens]
Length = 588
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|451850136|gb|EMD63438.1| hypothetical protein COCSADRAFT_327942 [Cochliobolus sativus
ND90Pr]
Length = 823
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L +P DV+E +R DL FG + V++ R
Sbjct: 260 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEDVTEDELREDLSKFGPIDTVKIVR-E 317
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 318 KAIGFVHFLSIGNAIKAVSQLPQEPKWQAPRRVYYGKDRCAYVSKTQQQN---------- 367
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 368 -------AAQYLGIAPGYAHVLNGADRDMISNALAQQSVAAAAVATSAGGVNNLGNRTVY 420
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 421 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 478
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 479 HNRRLKIGWGKHSG 492
>gi|395857936|ref|XP_003801336.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Otolemur garnettii]
Length = 588
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|359463230|ref|ZP_09251793.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 45.8 bits (107), Expect = 0.039, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
+I V NL ++ LK F FG VK++ RET K+ FIE + + AKA+K+
Sbjct: 2 SIFVGNLSYAITEQDLKTAFSQFGAVKQVKLPIDRETGKKQGFAFIEMDNEAEEAKAIKK 61
Query: 285 MNGQEIYGKHVVIEFSRP 302
++G E GK + + ++P
Sbjct: 62 LDGGEWMGKTLTVYKAKP 79
>gi|123226042|ref|XP_001285829.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123474703|ref|XP_001320533.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121850140|gb|EAX72899.1| hypothetical protein TVAG_477650 [Trichomonas vaginalis G3]
gi|121903340|gb|EAY08310.1| hypothetical protein TVAG_401640 [Trichomonas vaginalis G3]
Length = 93
Score = 45.8 bits (107), Expect = 0.039, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I+V NL + T+K+ F FG + +++ + ++Q IEF DA A+ M+G EI
Sbjct: 7 ILVSNLPPQTTEQTIKDAFVIFGDLADIK-MKMDRNQALIEFNYESDAEAAIDNMDGAEI 65
Query: 291 YGKHVVIEFSRPG 303
YG+ + F+ G
Sbjct: 66 YGQTIYCTFATKG 78
>gi|228008295|ref|NP_001153147.1| heterogeneous nuclear ribonucleoprotein Q isoform 4 [Homo sapiens]
gi|297678606|ref|XP_002817155.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Pongo abelii]
gi|301775587|ref|XP_002923214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Ailuropoda melanoleuca]
gi|332218421|ref|XP_003258354.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|332824482|ref|XP_518621.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Pan
troglodytes]
gi|348578332|ref|XP_003474937.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Cavia porcellus]
gi|426234738|ref|XP_004011349.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 6
[Ovis aries]
gi|296484069|tpg|DAA26184.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 1 [Bos taurus]
Length = 588
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALK 283
D NN+ T+ V LD VS L++ F +G V ++ PL K F+++ + DA +AL+
Sbjct: 18 DSNNR-TVYVGGLDQNVSEDELRKSFAKYGDVASVK-IPLGKQCGFVQYVNRTDAEEALQ 75
Query: 284 EMNGQEIYGKHVVIEFSRPGGHSK 307
+NG I + V + + R H +
Sbjct: 76 GLNGAVIGKQAVRLSWGRSPSHKQ 99
>gi|326430602|gb|EGD76172.1| splicing factor 3b [Salpingoeca sp. ATCC 50818]
Length = 256
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N T+ V LD + S L E+FQ GPV + R T L + F+EF DA
Sbjct: 9 NQDATVYVGGLDDRATESLLWELFQQAGPVVSVHMPKDRVTGLHQGYGFVEFLGEEDAEY 68
Query: 281 ALKEMNGQEIYGK 293
ALK MN +YGK
Sbjct: 69 ALKIMNMINLYGK 81
>gi|125551311|gb|EAY97020.1| hypothetical protein OsI_18941 [Oryza sativa Indica Group]
Length = 104
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL----RETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ V NL +LK+ F +G V RET + F+ F D + A+ A+K MN
Sbjct: 25 VYVGNLPYRADERSLKDSFANYGAVSSEIAVDRETGRSRGFGFVSFQDSKSASDAIKGMN 84
Query: 287 GQEIYGKHVVIEFSRP 302
GQ+I G++V+++ ++P
Sbjct: 85 GQDIGGRNVIVQEAQP 100
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQ 267
Q P + G+ T+ V L+ S +K F+A+GP+K +R ET +
Sbjct: 123 QKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGY 182
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR----PGGHSKKFFYANSSSCASSLNY 323
FIE+ RD A K+ +G+++ + V+++ R P ++ SS N
Sbjct: 183 AFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENA 242
Query: 324 STIYQTRNSDCPPPPLSADP 343
TR+ P S +P
Sbjct: 243 EQKLSTRDQQHAGRPRSEEP 262
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + +L V + F+ +G V ++ LK F+EF D RDA A+K++NG+E+
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIH---LKNGFGFVEFEDHRDADDAIKDLNGKEL 61
Query: 291 YGKHVVIEFSR-----PGG 304
G+ V +E + PGG
Sbjct: 62 LGERVSVELAHGSRRGPGG 80
>gi|121715928|ref|XP_001275573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
gi|119403730|gb|EAW14147.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
Length = 152
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL--------RETPLKKHQRFIEFYDVRDAAKA 281
T+ V LD V+ TL E F FG V ++ T L + ++EF +DAA+A
Sbjct: 10 TVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSTDLHRGFGYVEFDLPQDAAEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRPGGHS 306
+ M+G E+YG+ + + ++P S
Sbjct: 70 IDNMDGSELYGRTIKVAAAKPQKES 94
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V NL + L E+F +G +K + R++ K ++EF D+ A KA + +
Sbjct: 141 LFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAHESL 200
Query: 286 NGQEIYGKHVVIEFSRP 302
GQEI G+ + +EFS+P
Sbjct: 201 VGQEIAGRAIRLEFSQP 217
>gi|344264675|ref|XP_003404417.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Loxodonta africana]
Length = 585
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 302 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 358
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 359 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 389
>gi|334324402|ref|XP_003340516.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Monodelphis
domestica]
Length = 588
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 59
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 60 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 93
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 223 PDG--NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVR 276
PDG + TI V NL V++ LK F GPV+ +R + K +++F+DV
Sbjct: 133 PDGYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYRGVSKGFGYVKFHDVE 192
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSR 301
A KA+ M+GQ G+H+ + F+R
Sbjct: 193 TAEKAVALMHGQLFEGRHLAVNFAR 217
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 299 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 357
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 358 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 391
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V LD VS L++ F +G V ++ PL K F++F DA +AL+ +NG
Sbjct: 299 TVYVGGLDPNVSEDELRKAFAKYGDVASVK-IPLGKQCGFVQFVSRTDAEEALQGLNGSV 357
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYST 325
I + V + + R H + A+S S +++ Y T
Sbjct: 358 IGKQAVRLSWGRSPSHKQS--RADSGSRRNNMYYGT 391
>gi|453080807|gb|EMF08857.1| hypothetical protein SEPMUDRAFT_151767 [Mycosphaerella populorum
SO2202]
Length = 815
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 211 WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
W QF P G+ + V NL S T ++IF F P E+ + +K+ F+
Sbjct: 388 WDQF--------PSGSR---LFVGNLSS--EKVTKRDIFHVFHPYGEIAQISIKQAYGFV 434
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
+F V D +AL G++I K + +E S+P
Sbjct: 435 QFLRVEDCTRALNAEQGRQIRDKRIHLEVSKP 466
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|328869164|gb|EGG17542.1| U2 small nuclear ribonucleoprotein B [Dictyostelium fasciculatum]
Length = 241
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKELRETPLKKH--QRFIEFYDVRDAAKALK 283
TI V N++ +S LKE +F +G + E+ + +K Q FI F D+ A+ AL+
Sbjct: 28 TIYVNNINEKLSQKKLKEQLYGLFSKYGTILEIISSKRQKMKGQAFIVFQDITAASNALR 87
Query: 284 EMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPPLSA 341
EMNG + +++ +++S+ N S S L+ + + + R + A
Sbjct: 88 EMNGFSFFDRNINVQYSK-----------NKSDAVSKLDGTYVEKKRERETEQEKRKA 134
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + + E+F GP K + +T F+EFY+ R A + MN
Sbjct: 8 TLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMN 67
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 68 GRKILGKEVKVNWA 81
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 42 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 101
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 102 AEDAMDAMDGAVLDGRELRVQMARYG 127
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQ 267
Q P + G+ T+ V L+ S +K F+A+GP+K +R ET +
Sbjct: 123 QKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGY 182
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR----PGGHSKKFFYANSSSCASSLNY 323
FIE+ RD A K+ +G+++ + V+++ R P ++ SS N
Sbjct: 183 AFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENA 242
Query: 324 STIYQTRNSDCPPPPLSADP 343
TR+ P S +P
Sbjct: 243 EQKLSTRDQQHAGRPRSEEP 262
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|354466428|ref|XP_003495676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Cricetulus griseus]
Length = 623
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|303390049|ref|XP_003073256.1| hypothetical protein Eint_071330 [Encephalitozoon intestinalis ATCC
50506]
gi|303302401|gb|ADM11896.1| hypothetical protein Eint_071330 [Encephalitozoon intestinalis ATCC
50506]
Length = 252
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 116 RLMEGIVTVHFYDLRHAEMAFKEIR---EQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNN 172
+L + I+ V F D +H E E+R E+H +++ SY ++N + +L
Sbjct: 11 QLTKTIIAVGFNDQKHQE----EVRGRVEKHFDVRE-SYKIQNDHRVLCILF-------- 57
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVP-TCNAVPDGNNQGTI 231
YD + E++ + ++ + +++ +P + + NQ T+
Sbjct: 58 -----YDERRAREAISFLKEEG----------ISSYHIISKYEIPRDMDKCDESRNQSTL 102
Query: 232 VVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ NL V E FG VK++R +K HQR +EFYD R A A MN
Sbjct: 103 LFTFKNLAGSVDDKEFGEQVGRFGEVKDIR--YVKTHQRCVEFYDSRSAVAAFHGMN 157
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
+ VF L S + L+E+F +GP+ ++ ++ +R F+ F +V DA +A +
Sbjct: 120 LGVFGLSSYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179
Query: 286 NGQEIYGKHVVIEFS 300
NG E+ G+ + ++FS
Sbjct: 180 NGMELDGRRIRVDFS 194
>gi|296812543|ref|XP_002846609.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS 113480]
gi|238841865|gb|EEQ31527.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS 113480]
Length = 155
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAA 279
+GTI V LD V++ TL E F FG + ++ T L + +IEF +DA
Sbjct: 8 KGTIYVGGLDQAVTARTLSEAFIPFGEIVDISLPKPELPSSTDLHRGFGYIEFELPQDAK 67
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
+A+ M+ E+YG+ + + ++P
Sbjct: 68 EAIDNMDQSELYGRTIKVAAAKP 90
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|428173305|gb|EKX42208.1| hypothetical protein GUITHDRAFT_111772 [Guillardia theta CCMP2712]
Length = 156
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKE-----LRETPLKKHQR---FIEFYDVR 276
GN + + V N+D ++ + ++FQ FG +K P + R F+EF
Sbjct: 21 GNAECRVYVGNMDPRLNEGAIVKLFQQFGKLKRCDYLWFTSGPRRGQPRGICFLEFESAE 80
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSK 307
A KA+ MNG+E++G+ +++E R HS+
Sbjct: 81 GAEKAIARMNGKELHGRKIIVE--RAQDHSQ 109
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + + E+F GP K + +T F+EFY+ R A + MN
Sbjct: 8 TLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMN 67
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 68 GRKILGKEVKVNWA 81
>gi|322709394|gb|EFZ00970.1| negative regulator of differentiation 1 [Metarhizium anisopliae
ARSEF 23]
Length = 798
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
VG+ + P+ V L +G +R + L +P DVS+ +R DL FG + V++ R
Sbjct: 267 VGWGK-PSQVPNSVALAVQQSGASRNVYLGNLPEDVSDEELREDLGKFGAIDTVKIVR-E 324
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VH+ + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 325 KNIAFVHYLSIANAIKAVSQLPQEAKWQAPRRVYYGKDRCAYVSKTQQQN---------- 374
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA +L R L++ G NN G ++
Sbjct: 375 -------AAQYLGIAPGYAHMLTGADRDLISNALAQQSVAAAAVATTAGGINNLGNRTIY 427
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 428 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMI 485
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 486 HNRRLKIGWGKHSG 499
>gi|195498869|ref|XP_002096710.1| aly [Drosophila yakuba]
gi|194182811|gb|EDW96422.1| aly [Drosophila yakuba]
Length = 266
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV- 275
P AV G+ ++V NLD GVS++ +KE+F FGP+K+ + R + DV
Sbjct: 97 PKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKA-AVHYDRSGRSLGTADVI 155
Query: 276 ----RDAAKALKEMNGQEIYGKHVVIEFS 300
DA KA+K+ +G + G+ + I+ +
Sbjct: 156 FERRADALKAIKQYHGVPLDGRPMTIQLA 184
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|322697191|gb|EFY88974.1| negative regulator of differentiation 1 [Metarhizium acridum CQMa
102]
Length = 798
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
VG+ + P+ V L +G +R + L +P DVS+ +R DL FG + V++ R
Sbjct: 267 VGWGK-PSQVPNSVALAVQQSGASRNVYLGNLPEDVSDEELREDLGKFGAIDTVKIVR-E 324
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VH+ + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 325 KNIAFVHYLSIANAIKAVSQLPQEAKWQAPRRVYYGKDRCAYVSKTQQQN---------- 374
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA +L R L++ G NN G ++
Sbjct: 375 -------AAQYLGIAPGYAHMLTGADRDLISNALAQQSVAAAAVATTAGGINNLGNRTIY 427
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 428 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMI 485
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 486 HNRRLKIGWGKHSG 499
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS + L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + +SFA
Sbjct: 123 FGVILQTPKIMRDPETGKSKSFA 145
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|15986735|gb|AAL11726.1|AF408434_1 RRM RNA binding protein NSAP1 [Mus musculus]
Length = 558
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 274 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 330
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 331 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 362
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD VS + L E+F GP+ + R T L + F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSDNLLWELFVQAGPIVSVHMPKDRITGLHQGYGFVEFLGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK V + ++ H K
Sbjct: 66 DADYAIKVMNMIKLYGKPVRV--NKASAHQKNL 96
>gi|345326438|ref|XP_003431044.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 588
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 361
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 362 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ S V+ L E+F + GP++ + K F++++D R A AL +NG+
Sbjct: 22 SVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSSYGFVDYFDHRSAVAALSTLNGR 81
Query: 289 EIYGKHVVIEFSRPGGH 305
+++G+ + + ++ G
Sbjct: 82 QMFGQSIKVNWAYASGQ 98
>gi|74194008|dbj|BAE36923.1| unnamed protein product [Mus musculus]
Length = 368
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQ 288
+ V NL + V+ L++ F FG ++ +++ K FI F D RD A KA++EMNG+
Sbjct: 84 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHF-DERDGAVKAMEEMNGK 139
Query: 289 EIYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
++ G+++ I F++P +K A + + +
Sbjct: 140 DLEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 172
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGGHSK 307
+K +G + G + +EF R GG ++
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGGRNE 86
>gi|194216236|ref|XP_001915171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Equus caballus]
Length = 562
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+ G+++ I F++P +K A + + + Y Y
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM-YDDYY 432
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALK 283
++++ L S S +++ F+ FG +K++ P+ + + F+EFYD +DA +ALK
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDV-YLPIDYYTKEPRGFGFVEFYDPKDAXEALK 71
Query: 284 EMNGQEIYGKHVVIEFSRPG 303
EMNG E+ + + ++ G
Sbjct: 72 EMNGXELXXNRIEVFVAQKG 91
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
V NL V+ + ++F GP K + +T F+EFY+ R AA +L MNG++
Sbjct: 16 VGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGRK 75
Query: 290 IYGKHVVIEFS 300
I GK V + ++
Sbjct: 76 IMGKEVKVNWA 86
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + +G++ +++ F FGP+ E+R P K + F+ F AA A+ +NG
Sbjct: 209 TVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYS-FVRFNSHESAAHAIVSVNGSS 267
Query: 290 IYGKHVV 296
I G HVV
Sbjct: 268 IEG-HVV 273
>gi|114145493|ref|NP_062640.2| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Mus musculus]
gi|44888326|sp|Q7TMK9.2|HNRPQ_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein; AltName: Full=pp68
gi|148694587|gb|EDL26534.1| mCG16769, isoform CRA_a [Mus musculus]
gi|148694589|gb|EDL26536.1| mCG16769, isoform CRA_a [Mus musculus]
Length = 623
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|357487649|ref|XP_003614112.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|217073180|gb|ACJ84949.1| unknown [Medicago truncatula]
gi|355515447|gb|AES97070.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|388494832|gb|AFK35482.1| unknown [Medicago truncatula]
Length = 170
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 221 AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL----KKHQRF--IEFYD 274
A+ G + T+ V L V+ S L F FG +K+++ TPL +KH+ F + F +
Sbjct: 2 AMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLE 60
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRP 302
DA+ A+ M+G E+YG+ + + ++ P
Sbjct: 61 REDASAAMDNMDGAELYGRVLTVNYALP 88
>gi|426353903|ref|XP_004044414.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 527
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|338710583|ref|XP_003362387.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Equus
caballus]
Length = 588
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F D RD A KA++EMNG++
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHF-DERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+ G+++ I F++P +K A + + + Y Y
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM-YDDYY 397
>gi|296414143|ref|XP_002836762.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295631601|emb|CAZ80953.1| unnamed protein product [Tuber melanosporum]
Length = 287
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 223 PDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVR 276
PD + G IV V N+ G++ + EIF + G V R ET K F E+ D
Sbjct: 3 PDRSATGKIVFVGNIPYGLTEEQITEIFSSVGRVLSFRLVYDRETGRPKGFGFAEYSDQE 62
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPP 336
AA A++ ++ EI G+ + ++FS G ++ + + AS + P
Sbjct: 63 TAASAVRNLDNYEIMGRKLRVDFSHEGSATEGMGMDDIMTQASG----------SGVLPA 112
Query: 337 PPLSADPPS 345
PL AD P+
Sbjct: 113 LPLGADLPA 121
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEMNGQEIYGKH 294
V+ +L+ F+ FG V + + ++ QR F+ F DA KA++EMN QE+ G+
Sbjct: 13 VTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEEMNEQELEGRR 72
Query: 295 VVIEFSRP 302
+ ++ S+P
Sbjct: 73 IKVDVSKP 80
>gi|389746958|gb|EIM88137.1| hypothetical protein STEHIDRAFT_130101 [Stereum hirsutum FP-91666
SS1]
Length = 621
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ +S ++ F+ G +K + + F+ FYD+R A +A + + G E
Sbjct: 149 TLFIRNIKYETNSDEVRRQFEEHGQIKTFFDLIANRGMVFVTFYDLRAAERARERLQGSE 208
Query: 290 IYGKHVVIEFSRPGGHSKK 308
I G+ + + +S P S+K
Sbjct: 209 ISGRPIDVHYSLPRDDSQK 227
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNN----QGTIVVF--NLDSG--VSSSTLKEIFQAFGPVK 256
++GRP+ + +P ++ G QG ++V N SG + ++ FQ FG VK
Sbjct: 209 ISGRPIDVHYSLPRDDSQKGGTQNQEMQGALLVTLRNSPSGQPIDEGEVRRKFQQFGDVK 268
Query: 257 ELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVI 297
+R + Q ++EF+D+R A +A + Q + V I
Sbjct: 269 SVRPAGDRPDQCYVEFFDIRSAEEAYGRLRHQSLQDGTVDI 309
>gi|194899179|ref|XP_001979138.1| GG10124 [Drosophila erecta]
gi|190650841|gb|EDV48096.1| GG10124 [Drosophila erecta]
Length = 266
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV- 275
P AV G+ ++V NLD GVS++ +KE+F FGP+K+ + R + DV
Sbjct: 97 PKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKA-AVHYDRSGRSLGTADVI 155
Query: 276 ----RDAAKALKEMNGQEIYGKHVVIEFS 300
DA KA+K+ +G + G+ + I+ +
Sbjct: 156 FERRADALKAIKQYHGVPLDGRPMTIQLA 184
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 182 VVAESLMIMNSYAPVLPPPARGLVAGRPVWAQF----------IVPTCNAVPDGNNQGTI 231
V E+ ++ + APV P A V+G Q +VP NA+ G
Sbjct: 18 VAVEAPLVAEASAPV-DPSAEQNVSGEVNSTQVEDDQGESDPSVVP-ANAITGGRETSDR 75
Query: 232 VVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR----FIEFYDVRDAAKALKEM 285
V++ NLD ++ LK+ FQ GP+ ++ K ++ F+E++ DA AL+ +
Sbjct: 76 VLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 286 NGQEIYGKHVVIEFS 300
NG++I V I ++
Sbjct: 136 NGKQIENNIVKINWA 150
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ + NL S+ ++EIFQ +G + + R+T K +++F V +A AL+
Sbjct: 299 TLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALEA 358
Query: 285 MNGQEIYGKHVVIEFSRP 302
+NGQE+ G+ + I+++ P
Sbjct: 359 LNGQEVEGRAIRIDYAAP 376
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD + +++V N+ S+ L +F +G V ++ R T + F+ + +
Sbjct: 10 PDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADE 69
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A KA++ ++G+E+ G+H+V++F++ G
Sbjct: 70 AQKAIERLDGREVDGRHIVVQFAKYG 95
>gi|3694986|gb|AAC62511.1| RRM RNA binding protein GRY-RBP [Mus musculus]
Length = 625
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 343 LFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 399
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 400 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 430
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V L S V+ TL +F+ FG +++++ P K+ F+++ + DA +A+ M
Sbjct: 326 NNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIK-IPPGKNCGFVKYTNREDAEEAIASMQ 384
Query: 287 GQEIYGKHVVIEFSRPGGHSKKF 309
G I G V + + R +KKF
Sbjct: 385 GFIIGGNRVRLSWGRVSASNKKF 407
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + N + LK++F FGP ++ E+ K F+ F DA KA+ EMN
Sbjct: 161 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 220
Query: 287 GQEIYGKHVVI 297
G+E+ GKH+ +
Sbjct: 221 GKELNGKHIYV 231
>gi|228008398|ref|NP_001153146.1| heterogeneous nuclear ribonucleoprotein Q isoform 3 [Homo sapiens]
gi|291396566|ref|XP_002714607.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 3 [Oryctolagus cuniculus]
gi|296198706|ref|XP_002746829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Callithrix jacchus]
gi|301775583|ref|XP_002923212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Ailuropoda melanoleuca]
gi|332218417|ref|XP_003258352.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|348578334|ref|XP_003474938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Cavia porcellus]
gi|397504634|ref|XP_003822889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Pan
paniscus]
gi|402867570|ref|XP_003897916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Papio anubis]
gi|426234736|ref|XP_004011348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 5
[Ovis aries]
gi|21619168|gb|AAH32643.1| SYNCRIP protein [Homo sapiens]
gi|119569013|gb|EAW48628.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_f [Homo sapiens]
gi|296484070|tpg|DAA26185.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 2 [Bos taurus]
gi|325464513|gb|ADZ16027.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
Length = 527
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|395857932|ref|XP_003801334.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Otolemur garnettii]
Length = 527
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L +G + L+ F +GP++ + F+E+ D RDA A+K M+G+ +
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDARDAEDAVKGMDGKVL 75
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSS 315
G V +E S G S+K Y S
Sbjct: 76 CGARVRVELS--NGMSRKSRYGRPS 98
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|344264677|ref|XP_003404418.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Loxodonta africana]
Length = 524
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 301 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 357
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 358 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 389
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|189217790|ref|NP_001121335.1| heterogeneous nuclear ribonucleoprotein R [Xenopus laevis]
gi|171847308|gb|AAI61702.1| LOC100158425 protein [Xenopus laevis]
Length = 511
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQ 288
+ V NL S V+ L++ F FG ++ +++ K F+ F D RDAA +A+ EMNG
Sbjct: 241 VLFVRNLSSTVTEEILEKAFSVFGKLERVKKL---KDYAFVHF-DERDAAVRAMDEMNGA 296
Query: 289 EIYGKHVVIEFSRPGGHSKK 308
E+ G+ + I ++P +K
Sbjct: 297 ELEGEEIEIVLAKPPDKKRK 316
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L G + L+ F+ +G +R+ +K F+EF D RDA A+ E+NG+++
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYG---RMRDVLIKNGYGFVEFDDHRDADDAVYELNGKKL 62
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 63 LGERVTVERAR 73
>gi|89272515|emb|CAJ81560.1| heterogeneous nuclear ribonucleoprotein R [Xenopus (Silurana)
tropicalis]
Length = 535
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQ 288
+ V NL S V+ L++ F FG ++ +++ K F+ F D RDAA +A+ EMNG
Sbjct: 244 VLFVRNLSSTVTEEILEKAFSVFGKLERVKKL---KDYAFVHF-DERDAAVRAMDEMNGT 299
Query: 289 EIYGKHVVIEFSRPGGHSKK 308
E+ G+ + I ++P +K
Sbjct: 300 ELEGEEIEIVLAKPPDKKRK 319
>gi|255948164|ref|XP_002564849.1| Pc22g08360 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591866|emb|CAP98124.1| Pc22g08360 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 113
Score = 45.4 bits (106), Expect = 0.050, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRE--TPLKKHQRFIEFYDVRDAAK 280
P+ N + V NL+ V++ L ++F FGP++++R+ K F+ + DV DA +
Sbjct: 7 PEANR--ILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANTSKGTAFVVYEDVHDAKQ 64
Query: 281 ALKEMNGQEIYGKHVVIEFSRP 302
A ++NG +++V+ + +P
Sbjct: 65 ACDKLNGFNFQNRYLVVLYHQP 86
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKE 284
T+ V L + S +K F+++GP+K +R K + FIE+ RD A K+
Sbjct: 142 TLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQ 201
Query: 285 MNGQEIYGKHVVIEFSR 301
+G++I G+ V+++ R
Sbjct: 202 ADGRKIDGRRVLVDVER 218
>gi|326916229|ref|XP_003204412.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Meleagris gallopavo]
Length = 527
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|358394588|gb|EHK43981.1| hypothetical protein TRIATDRAFT_293293, partial [Trichoderma
atroviride IMI 206040]
Length = 859
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 211 WAQFIV--------PTCNAVPDGNNQGTIVVFNLDSG-VSSSTLKEIFQAFGPVKELRET 261
W QF+ + P+G+ I + NL S VS + +IF FG L +
Sbjct: 350 WDQFMADERQYMSEAKWDRFPEGSR---IFIGNLSSDKVSKRDVFDIFHRFG---RLAQI 403
Query: 262 PLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
LK F++++ V + AL+ + G E+ G+ + +E SR SKK
Sbjct: 404 SLKSAYGFVQYHTVEEGHSALENLQGMEVKGRRIHLEISRLQDKSKK 450
>gi|225433902|ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL----KKHQRF--IEFYDVRDAAKALK 283
T+ V L V+ S L F FG +K+++ TPL +KH+ F + F + DAA A+
Sbjct: 9 TLYVGGLAEEVNESILHSAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEKEDAAAAMD 67
Query: 284 EMNGQEIYGKHVVIEFSRP 302
M+G E+YG+ + + ++ P
Sbjct: 68 NMDGAELYGRVLTVNYALP 86
>gi|221039872|dbj|BAH11699.1| unnamed protein product [Homo sapiens]
Length = 256
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ + + K FI F + A KA++EMNG++
Sbjct: 33 VLFVRNLANTVTEEILEKAFSQFGKLERVEKL---KDYAFIHFDERDGAVKAMEEMNGKD 89
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 90 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 121
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|4680498|gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ S L E+FQ+ GPV+ + +K F+++YD R AA A+ +NG+
Sbjct: 211 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAIVSLNGR 270
Query: 289 EIYGKHVVIEFSRPGGHSKKFFY 311
++ + + + + G S+ F +
Sbjct: 271 QLDAR---VMWDQKTGRSRGFGF 290
>gi|255948266|ref|XP_002564900.1| Pc22g08880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591917|emb|CAP98176.1| Pc22g08880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 825
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L +P + SE +R DL FG + V++ +
Sbjct: 255 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLPEETSEDDLREDLGKFGPIDTVKIVK-E 312
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +EQ Q ++ + K+ Y S N
Sbjct: 313 KAIGFVHFLSISNAMKAVTQLPQEQQWQAPKRVFYGKDRCAYVSKTQQQN---------- 362
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R L++ G NN G ++
Sbjct: 363 -------AAQFLGIAPGYAHVLNTADRDLISNALAQQSVAAAAVATTAGGVNNLGNRTIY 415
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 416 -LGNIHPETTIEEICNVVRGGLLHHVRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 473
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 474 HNRRLKIGWGKHSG 487
>gi|29788787|ref|NP_062770.1| heterogeneous nuclear ribonucleoprotein Q isoform 2 [Mus musculus]
gi|26330244|dbj|BAC28852.1| unnamed protein product [Mus musculus]
gi|26346458|dbj|BAC36880.1| unnamed protein product [Mus musculus]
gi|148694591|gb|EDL26538.1| mCG16769, isoform CRA_d [Mus musculus]
Length = 562
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|393911205|gb|EJD76209.1| HnRNP-R [Loa loa]
Length = 729
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL V+ LKE+F A+G V ++ + FI F + A KA++ +NG E+
Sbjct: 493 LYVRNLKEAVTEEQLKEMFSAYGEVDRAKKI---RDYAFIHFMEREPAIKAMEALNGTEL 549
Query: 291 YGKHVVIEFSRPGGHSKKFF 310
G + I ++P KK
Sbjct: 550 EGIAIDISLAKPQSDKKKMM 569
>gi|354466426|ref|XP_003495675.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Cricetulus griseus]
gi|344238401|gb|EGV94504.1| Heterogeneous nuclear ribonucleoprotein Q [Cricetulus griseus]
Length = 562
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQ--RFIEFYDVRDAA 279
GN++ T+ V L V LK F FG + E++ + +KH+ FIE+ + RDAA
Sbjct: 4 GNSKKTLYVGGLAEEVDEKVLKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAA 63
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
A+ M+ E+YG+ + + ++P
Sbjct: 64 AAIDNMHDSELYGRTLRVNLAKP 86
>gi|158339723|ref|YP_001520730.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309964|gb|ABW31580.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 45.4 bits (106), Expect = 0.051, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
+I V NL ++ LK F FG VK++ RET K+ FIE + + AKA+K+
Sbjct: 2 SIFVGNLSYAITEQDLKTAFSQFGAVKQVKLPIDRETGKKQCFAFIEMDNEAEEAKAIKK 61
Query: 285 MNGQEIYGKHVVIEFSRP 302
++G E GK + + ++P
Sbjct: 62 LDGGEWMGKTLTVYKAKP 79
>gi|159475431|ref|XP_001695822.1| hypothetical protein CHLREDRAFT_80366 [Chlamydomonas reinhardtii]
gi|158275382|gb|EDP01159.1| predicted protein [Chlamydomonas reinhardtii]
Length = 170
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 211 WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
WAQ + D T+ V N D V +T ++I + FG L +KK F+
Sbjct: 76 WAQ--KSEADRKRDTKPSRTLFVVNFD--VRRTTERDIERYFGRFGRLTRVQIKKSYSFV 131
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
+F +V DA KA++ NG ++ G+ + +E+
Sbjct: 132 QFQNVEDAIKAMERANGAQMEGRTLAVEY 160
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + N + LK++F FGP ++ E+ K F+ F DA KA+ EMN
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 287 GQEIYGKHVVI 297
G+E+ GKH+ +
Sbjct: 253 GKELNGKHIYV 263
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVR 276
+ + N TI V LD VS S L E+F GPV + R+ + HQ F+EF
Sbjct: 6 IQERNQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGED 65
Query: 277 DAAKALKEMNGQEIYGK 293
DA A+K MN ++YGK
Sbjct: 66 DADYAIKIMNMIKLYGK 82
>gi|301618964|ref|XP_002938875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Xenopus
(Silurana) tropicalis]
Length = 532
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA-KALKEMNGQ 288
+ V NL S V+ L++ F FG ++ +++ K F+ F D RDAA +A+ EMNG
Sbjct: 241 VLFVRNLSSTVTEEILEKAFSVFGKLERVKKL---KDYAFVHF-DERDAAVRAMDEMNGT 296
Query: 289 EIYGKHVVIEFSRPGGHSKK 308
E+ G+ + I ++P +K
Sbjct: 297 ELEGEEIEIVLAKPPDKKRK 316
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKEL--RETPLKKHQRFIEFYDVRDAAKALK 283
TI V NL+ V T+K+ +FQ +GP+ ++ + + +K Q FI F + A +A++
Sbjct: 26 TIYVNNLEERVKIDTMKQALIRVFQYYGPILDVIAKSSLKRKGQAFIVFDSEKAALEAVE 85
Query: 284 EMNGQEIYGKHVVIEFSRPGGHS 306
+MNG E+YGK V+ R HS
Sbjct: 86 DMNGFEMYGK--VMRVHRAKTHS 106
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|403357290|gb|EJY78271.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 109
Score = 45.4 bits (106), Expect = 0.052, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L V L+++F A+G V+ L R T K F+EF +++ A K + E
Sbjct: 26 TLCVSGLHGEVQEEDLQDLFGAYGQVRNLHLNLDRRTGYVKGYAFLEFEELKTAKKVIDE 85
Query: 285 MNGQEIYGKHVVIEFS--RP 302
+NG+ + G+ + ++F+ RP
Sbjct: 86 LNGKMLLGQQIKVDFAFKRP 105
>gi|345326440|ref|XP_001510154.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ornithorhynchus anatinus]
Length = 527
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 392
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAA 279
G+ T+ V L+ + S +K F+A+GP+K +R ET + FIE+ RD
Sbjct: 134 GDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMK 193
Query: 280 KALKEMNGQEIYGKHVVIEFSR 301
A K+ +G+++ + V+++ R
Sbjct: 194 AAYKQADGRKLDNRRVLVDVER 215
>gi|303286617|ref|XP_003062598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456115|gb|EEH53417.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKE---LRE--TPLKKHQRFIEFYDVRDAAKALKEM 285
+ V NL V TLK +F AFG V+ +R+ T + F++F V+ A A+KEM
Sbjct: 119 VYVKNLAEDVDELTLKSVFDAFGVVESCCVIRDVSTNTSRGFGFVKFDGVQSAESAIKEM 178
Query: 286 NGQEIYGKHVVIEFS 300
+G+ + G+ + ++F+
Sbjct: 179 HGKSVRGRTLEVKFA 193
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS + L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + +SFA
Sbjct: 123 FGVILQTPKIMRDPETGKSKSFA 145
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N T V NLDS VS L E+F GPV + R T L + FIEF DA
Sbjct: 22 NQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEDDADY 81
Query: 281 ALKEMNGQEIYGKHVVI 297
A+K +N ++YGK + +
Sbjct: 82 AIKILNMIKLYGKPIRV 98
>gi|6576815|dbj|BAA88342.1| SYNCRIP [Mus musculus]
gi|51329959|gb|AAH80309.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Mus
musculus]
gi|127797499|gb|AAH41148.2| Syncrip protein [Mus musculus]
gi|127801712|gb|AAI08364.2| Syncrip protein [Mus musculus]
Length = 561
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|356499919|ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
Length = 172
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 221 AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL----KKHQRF--IEFYD 274
A+ G + T+ V L V+ S L F FG +K+++ TPL +KH+ F + F +
Sbjct: 2 AMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLE 60
Query: 275 VRDAAKALKEMNGQEIYGKHVVIEFSRP 302
DA+ A+ M+G E+YG+ + + ++ P
Sbjct: 61 REDASAAMDNMDGAELYGRVLTVNYALP 88
>gi|393911204|gb|EJD76208.1| HnRNP-R, variant [Loa loa]
Length = 696
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL V+ LKE+F A+G V ++ + FI F + A KA++ +NG E+
Sbjct: 460 LYVRNLKEAVTEEQLKEMFSAYGEVDRAKKI---RDYAFIHFMEREPAIKAMEALNGTEL 516
Query: 291 YGKHVVIEFSRPGGHSKKFF 310
G + I ++P KK
Sbjct: 517 EGIAIDISLAKPQSDKKKMM 536
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS + L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + +SFA
Sbjct: 123 FGVILQTPKIMRDPETGKSKSFA 145
>gi|127799069|gb|AAH50079.2| Synaptotagmin binding, cytoplasmic RNA interacting protein [Mus
musculus]
Length = 562
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>gi|154757562|gb|AAI51724.1| SYNCRIP protein [Bos taurus]
Length = 456
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 379 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 435
Query: 290 IYGKHVVIEFSRP 302
+ G+++ I F++P
Sbjct: 436 LEGENIEIVFAKP 448
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR---ETPLKKHQRFIEFYDVRDAAKALKEMN 286
T+ V NL V+ + + E+F GP K + +T F+EFY+ R A + MN
Sbjct: 8 TLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMN 67
Query: 287 GQEIYGKHVVIEFS 300
G++I GK V + ++
Sbjct: 68 GRKILGKEVKVNWA 81
>gi|345308678|ref|XP_001519607.2| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 454
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR----FIEFYDVRDAAKALKEMN 286
I+V NL + L+++F +G VK +R K+Q F+EF ++A A++ +
Sbjct: 371 IIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKNQHRGFAFVEFMSKKEAIHAIEMLQ 430
Query: 287 GQEIYGKHVVIEFS 300
+YG+H+++EFS
Sbjct: 431 NSHLYGRHLILEFS 444
>gi|330918683|ref|XP_003298315.1| hypothetical protein PTT_08983 [Pyrenophora teres f. teres 0-1]
gi|311328549|gb|EFQ93581.1| hypothetical protein PTT_08983 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L + DVSE +R DL FG + V++ R
Sbjct: 259 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLSEDVSEEELREDLSKFGPIDTVKIVR-E 316
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 317 KAIGFVHFLSIGNAIKAVSQLPQETKWQAPRRVYYGKDRCAYVSKTQQQN---------- 366
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 367 -------AAQYLGIAPGYAHVLNGADRDMISNALAQQSVAAAAVATSAGGVNNLGNRTVY 419
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 420 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 477
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 478 HNRRLKIGWGKHSG 491
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 239 GVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
G + L+ F+ +G +R+ +K F+EF D RDA A+ E+NG+++ G+ V +E
Sbjct: 14 GTTERDLERFFRGYG---RMRDVLIKNGYGFVEFDDHRDADDAVYELNGKKLLGERVTVE 70
Query: 299 FSR 301
+R
Sbjct: 71 RAR 73
>gi|25145017|ref|NP_497276.2| Protein RNP-5 [Caenorhabditis elegans]
gi|351065877|emb|CCD61878.1| Protein RNP-5 [Caenorhabditis elegans]
Length = 289
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+V+ NL V + L+EIF +G +K + P + H ++E+ ++ DA K++K
Sbjct: 135 VVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKH 194
Query: 285 MNGQEIYGKHVVIEFS 300
M+G +I G V +E +
Sbjct: 195 MDGGQIDGMAVHVEMT 210
>gi|170592443|ref|XP_001900974.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
gi|158591041|gb|EDP29654.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
Length = 709
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL V+ LKE+F A+G V ++ + FI F + A KA++ +NG E+
Sbjct: 473 LYVRNLKEAVTEEQLKEMFSAYGEVDRAKKI---RDYAFIHFMEREPAIKAMEALNGTEL 529
Query: 291 YGKHVVIEFSRPGGHSKKFF 310
G + I ++P KK
Sbjct: 530 EGIAIDISLAKPQSDKKKMM 549
>gi|116283697|gb|AAH24283.1| SYNCRIP protein [Homo sapiens]
Length = 453
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 375 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 431
Query: 290 IYGKHVVIEFSRP 302
+ G+++ I F++P
Sbjct: 432 LEGENIEIVFAKP 444
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGG 304
+K +G + G + +EF R GG
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGG 83
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVRDA 278
D N ++ N+D V+ L E+F FGPV+ L ++ LK HQ F+EF +DA
Sbjct: 12 DRNINASLYFSNIDYQVTELLLYELFIQFGPVRTLNLPKDRILKTHQGYGFVEFKTAKDA 71
Query: 279 AKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASS 320
L+ + G ++GK V++ + H F N S+ AS+
Sbjct: 72 EYVLEILRGIRLFGK--VLKLKKVDPH----FKTNPSASASN 107
>gi|338710585|ref|XP_003362388.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Equus
caballus]
Length = 527
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 304 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 360
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIY 327
+ G+++ I F++P +K A + + + Y Y
Sbjct: 361 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM-YDDYY 397
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
V ++ F+ +G +LRE +K F+EF D RDA A+ E+NG+E+ G+ V +E
Sbjct: 14 VKERDIERFFRGYG---KLREVLIKNGYGFVEFEDYRDADDAVYELNGKELCGERVSVEH 70
Query: 300 S 300
+
Sbjct: 71 A 71
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIE 271
P D N G + + NL V L F+ FG +K +R + R ++E
Sbjct: 233 PKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVE 292
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
F + DAAKAL+ NG E+ + + ++FS P
Sbjct: 293 FENAEDAAKALEAKNGAELDNRAIRLDFSVP 323
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 214 FIVPTCNAVPD---------GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
I+ C A D + ++V N+ + L+++F FG +K LR P+K
Sbjct: 622 LILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMK 680
Query: 265 --KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ ++ +YG+H+V+E ++ G
Sbjct: 681 FGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVMERAKEG 723
>gi|171686830|ref|XP_001908356.1| hypothetical protein [Podospora anserina S mat+]
gi|170943376|emb|CAP69029.1| unnamed protein product [Podospora anserina S mat+]
Length = 753
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 62 AQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGI 121
+Q PT L V +G +R + L +P D+SE +R DL FG + +++ R + I
Sbjct: 286 SQVPTSVHLAVQ----QSGASRNVYLGNLPEDISEEELREDLGKFGAIDTIKIVR-EKNI 340
Query: 122 VTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLATGCY 178
VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 341 AFVHFLSIANAIKAVSQLPQEAKWQAPRRVYYGKDRCAYVSKTQQQN------------- 387
Query: 179 DNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVFNLD 237
A+ L I YA +L R L++ G N G ++ L
Sbjct: 388 ----AAQYLGIAPGYAHMLTGADRDLISSALAQQSVAAAAVATTAGGITNLGNRTIY-LG 442
Query: 238 SGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEIYGK 293
+ +T++EI G + +R P KH F+ F D AA AL + G I+ +
Sbjct: 443 NIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTAAASFYALSNLQGLMIHNR 501
Query: 294 HVVIEFSRPGG 304
+ I + + G
Sbjct: 502 RLKIGWGKHSG 512
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGALLDGRELRVQMARYG 93
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEFYDVRDAAKALKEMNGQ 288
++ V N+ V+ + L+E+FQ+ G V+ + +K F+++YD R AA ++ +NG+
Sbjct: 66 SVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALSILTLNGK 125
Query: 289 EIYGKHVVIEFSRPGGH 305
+I+G+ + + ++ G
Sbjct: 126 QIFGQLIRVNWAYASGQ 142
>gi|327297312|ref|XP_003233350.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326464656|gb|EGD90109.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 256
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 230 TIVVFNLDSGVSSSTLKE----IFQAFGPVKEL-RETPLK-KHQRFIEFYDVRDAAKALK 283
T+ V NL+ + LKE IF +G + E+ +T LK K Q FI F +V A +A+
Sbjct: 16 TVYVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVESATRAID 75
Query: 284 EMNGQEIYGKHVVIEFSR 301
E+NG E++ K +V+E+++
Sbjct: 76 EVNGFELFEKPMVLEYAK 93
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPV---KELRE-TPLKKHQRFIEFYDVRDAAKALKEMN 286
+ V NLD +S LKE+F FG + K +R+ + + F+ F +A+KAL EMN
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 287 GQEIYGKHVVIEFSR 301
G+ + K + + ++
Sbjct: 384 GKMVVSKPLYVALAQ 398
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL V +++ F+ +G +RE +K F+EF D RDA + +M+G+E
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYG---RIREVVIKSGYGFVEFDDPRDADDVVNDMDGKEF 63
Query: 291 YGKHVVIEFSR 301
G V +E +R
Sbjct: 64 QGGRVRVEMAR 74
>gi|66803959|ref|XP_635793.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60464119|gb|EAL62280.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALK 283
G + + L + +S TL+ IF AFG + R T L + F++F DV A A+
Sbjct: 99 GNLFISFLPATYTSDTLRSIFSAFGEIDSCRVMVDLNTGLSRGFGFVKFKDVASAQYAIN 158
Query: 284 EMNGQEIYGKHVVIEFS 300
MNG ++ K +++ F+
Sbjct: 159 SMNGAKVENKTLLVRFA 175
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L + ++ F+ FG ++++ LK F+EF D RDA A+ EMN +++
Sbjct: 6 VFIGRLSHRARENDVERFFKGFGKIRDI---NLKNGYGFVEFDDSRDADDAVYEMNNRDL 62
Query: 291 YGKHVVIEFSR 301
G+ V +E +R
Sbjct: 63 CGERVTVELAR 73
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G +L E +K F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---KLLEVDMKNGYGFVEFEDNRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G +L E +K F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---KLLEVDMKNGYGFVEFEDNRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|414869521|tpg|DAA48078.1| TPA: hypothetical protein ZEAMMB73_400135 [Zea mays]
Length = 183
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEFYDVRDAAKALKEMNGQ 288
++ V N++ V+ S L E+FQ+ G V+ + +K F+++YD R AA A+ ++G+
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 131
Query: 289 EIYGKHVVIEFSRPGGH---SKKFFYANSSSCASSLNYSTIY 327
+YG+ + + ++ + F+ +S +N +T+Y
Sbjct: 132 HVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLY 173
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G V R+ +K F+EF D RDA A +NG++
Sbjct: 13 LYVGRLSSRTRTRDLESLFSRYGRV---RDVDMKHDFAFVEFSDPRDADDARYNLNGRDF 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|402466767|gb|EJW02193.1| hypothetical protein EDEG_03369 [Edhazardia aedis USNM 41457]
Length = 252
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 212 AQFIVPTCNAVPD-GNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR 268
+++ +P N + D NQGT+++ +L + ++ + I ++G +KE+RE K Q+
Sbjct: 89 SKYEIPKENDICDETKNQGTLLLVSRDLQTPLTEKEIVAILGSYGEIKEIRE--YKAFQK 146
Query: 269 FIEFYDVRDAAKA 281
F+EFYD R A KA
Sbjct: 147 FVEFYDTRCAVKA 159
>gi|397610803|gb|EJK61025.1| hypothetical protein THAOC_18547 [Thalassiosira oceanica]
Length = 178
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKE--LRETPLKKHQR---FIEFYDVRDAAKALKEM 285
+ V ++D+ V+ + L +F AFGP+++ L+ PL R F+ + D RDA A++ M
Sbjct: 109 VYVGSIDAAVTQAQLYALFSAFGPLQKVLLQMDPLTGQSRGFAFLSYRDARDANLAIRTM 168
Query: 286 NGQEIYGKHV 295
GQ + G+ +
Sbjct: 169 GGQVVAGRQL 178
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L + + S ++ F+ FG + RE LK F+EF + RDA A+ EMN Q +
Sbjct: 21 VFIGRLSNRATESDVERFFKGFGRI---REVKLKTGYGFVEFEENRDAEDAVYEMNNQSL 77
Query: 291 YGKHVVIEFSR 301
G+ V +E ++
Sbjct: 78 CGERVTVEHAK 88
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
TI V LDS V+ LK+ F +G + ++ P+ K F++F + +A +AL+++NG
Sbjct: 296 TIFVGGLDSNVTDEDLKQTFSQYGEIASVK-IPVGKGCGFVQFANRNNAEEALQKLNGTM 354
Query: 290 IYGKHVVIEFSR 301
I + V + + R
Sbjct: 355 IGKQTVRLSWGR 366
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G V R+ +K F+EF D RDA A +NG++
Sbjct: 13 LYVGRLSSRTRTRDLESLFSRYGRV---RDVDMKHDFAFVEFSDPRDADDARYNLNGRDF 69
Query: 291 YGKHVVIEFSR 301
G +++EF++
Sbjct: 70 DGSRIIVEFAK 80
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|357614246|gb|EHJ68984.1| hypothetical protein KGM_20249 [Danaus plexippus]
Length = 260
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL ++ LKE F+ +G
Sbjct: 48 RRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQEITEEALKEEFERYGN 107
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
V+ +++ K F+ F D A KA++E++G+E+ G + + ++P KK
Sbjct: 108 VERVKKI---KDYAFVHFEDRDCAVKAMQEIDGKELGGARLEVSLAKPPSDKKK 158
>gi|348529965|ref|XP_003452482.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Oreochromis
niloticus]
Length = 631
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 205 VAGRPVWAQFIVPTCNAVPDGNNQGTIV-VFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
V G PV ++ P P+ + ++ V L + V+ L++ F FG ++ +++
Sbjct: 316 VWGNPVTVEWADPVAEPDPEVMAKVKVLFVRKLATAVTEELLEKTFSQFGKLERVKKL-- 373
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
K F+ F + A KA++EMNG+E+ G+ + I ++P +K
Sbjct: 374 -KDYAFVHFEERDAAVKAMEEMNGKELGGEEIEIVLAKPPDKKRK 417
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L+ + S +K F+A+GP+K +R ET + FIE+ RD A K+
Sbjct: 139 TLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQ 198
Query: 285 MNGQEIYGKHVVIEFSR 301
+G+++ + V+++ R
Sbjct: 199 ADGRKLDNRRVLVDVER 215
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|385305163|gb|EIF49154.1| translation initiation factor eif3g [Dekkera bruxellensis AWRI1499]
Length = 281
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V NL++ +S L+EIF FG V+ L RET + F+E V A A+++
Sbjct: 200 TVRVTNLNTMLSEDLLREIFSRFGYVQRLTILRNRETGESRGIAFVEMDTVEHAKSAIEK 259
Query: 285 MNGQEIYGKHVVIEFSRPGGH 305
+NG+ I + +F++P G
Sbjct: 260 LNGRGIMNLIINADFAKPRGE 280
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + N + LKE+F +GP +R E+ K F+ F DA KA+ EMN
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 287 GQEIYGKHVVIEFSRPGGHSK 307
G+E+ G+ V + ++ G +
Sbjct: 253 GKELNGRQVYVGRAQKKGERQ 273
>gi|221480768|gb|EEE19199.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 1335
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
++ + V N V +++ IF FG + E++ + KH + + D A +A++E+N
Sbjct: 174 DERKVFVGNTPLAVREPSVERIFGEFGKLSEIK---IFKHFLHLTYDDATAATRAVEELN 230
Query: 287 GQEIYGKHVVIEFSRPGGHSKK 308
+E++G +V+E RPG S++
Sbjct: 231 DKEVWGAQIVVEPLRPGAASQR 252
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 216 VPTCNAVP--DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEF 272
+P+ N P D + ++ V N+ + VS L+E+F + GPV+ + +K FI +
Sbjct: 38 IPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHY 97
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+D R AA A+ +NG+ ++G+ + + ++ G
Sbjct: 98 FDRRSAALAILSLNGRHLFGQPIKVNWAYASGQ 130
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQ 288
G + + L V ++ F+ +G V ++ LK F+EF D RDA A+ E+NG+
Sbjct: 3 GRVYIGRLSYQVRERDVERFFKGYGRVTDI---LLKNGYGFVEFEDYRDADDAVYELNGK 59
Query: 289 EIYGKHVVIEFSR 301
++ G V++E ++
Sbjct: 60 DLMGDRVLVEHAK 72
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
Q +VV NL S VS LK+ + G V K+++ +EF D A++++N
Sbjct: 119 QYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSKRNEGIVEFATRSDMDNAIRKLNK 178
Query: 288 QEIYGKHVVIEFSRP 302
EI GK + + RP
Sbjct: 179 TEINGKRITLVEDRP 193
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL S S L++ F +FGP+K + F+EF D RDA+ A+K+++ I
Sbjct: 60 VYVGNLGESASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDLDSSTI 119
Query: 291 YGKHVVIEFS 300
G+ +E S
Sbjct: 120 CGQRASVELS 129
>gi|410915935|ref|XP_003971442.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Takifugu rubripes]
Length = 637
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F +G
Sbjct: 308 RRLMSGKVKVWGNMVTVEWADPMEDPDPEVMAKVKVLFVRNLANSVTEEILEKSFSEYGN 367
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K FI F + A KAL+EMNG+E+ G+ + I F++P +K
Sbjct: 368 LERVKKL---KDYAFIHFEERDGAVKALEEMNGKELEGEPIEIVFAKPPDQKRK 418
>gi|440633939|gb|ELR03858.1| hypothetical protein GMDG_01387 [Geomyces destructans 20631-21]
Length = 898
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 244 TLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
T ++IF F L + +K+ F++F+DV+ AL+ GQEI G+ + +E S+P
Sbjct: 434 TKRDIFYIFHKFGRLAQVSIKQAYGFVQFHDVKACHAALQREQGQEIRGRKMHLEISKPQ 493
Query: 304 GHSKK 308
++++
Sbjct: 494 KNTRQ 498
>gi|407396775|gb|EKF27539.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 341
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV---KELRETPLKKHQR---FIEFYDV 275
+P G + ++V + + VS TL+E+F+ FG + + +R+ H + F+ + D
Sbjct: 1 MPSGGDPRNLIVNYIPTPVSDETLREMFEKFGTLVSARVIRDKKRDGHPKGYGFVVYADR 60
Query: 276 RDAAKALKEMNGQEIYGKHVVI 297
+A++EMNG +I+ KH+ +
Sbjct: 61 ESGLRAMEEMNGFKIHNKHLRV 82
>gi|225563226|gb|EEH11505.1| nuclear cap-binding protein [Ajellomyces capsulatus G186AR]
Length = 154
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAAKA 281
TI V LD V+ TL E F FG + ++ T L + ++EF D +DA +A
Sbjct: 10 TIYVGGLDQSVTLRTLTEAFLPFGEIADISLPKPEAPSSTDLHRGFGYVEFEDPQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|154281705|ref|XP_001541665.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411844|gb|EDN07232.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 154
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAAKA 281
TI V LD V+ TL E F FG + ++ T L + ++EF D +DA +A
Sbjct: 10 TIYVGGLDQSVTLRTLTEAFLPFGEIADISLPKPEAPSSTDLHRGFGYVEFEDPQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LD+ V+ LK +F +G + ++ P K F++F + A +AL+ +N
Sbjct: 259 NNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLN 317
Query: 287 GQEIYGKHVVIEFSRP-----GGHSKKFFYANSSSCASSLNYS 324
G ++ G V + + R G +F+Y Y+
Sbjct: 318 GVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYT 360
>gi|302659230|ref|XP_003021308.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
gi|291185200|gb|EFE40690.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
Length = 152
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAA 279
+GTI V LD V+ TL E F FG + ++ T L + +IEF +DA
Sbjct: 8 KGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEFELPQDAK 67
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
+A+ M+ E+YG+ + + ++P
Sbjct: 68 EAIDNMDQSELYGRTIKVAAAKP 90
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 220 NAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAA 279
NA P+ NN + V NL +S+ L +F FG + + + F+ + D+ AA
Sbjct: 615 NASPEINN-CRLYVTNLPQTMSADKLVSLFMPFGQIDRV---VMYAEYSFVLYADINSAA 670
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
KALK M+G I GK +V++ S P
Sbjct: 671 KALKHMDGYLIEGKRLVVKGSEP 693
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGG 304
+K +G + G + +EF R GG
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGG 83
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ---RFIEFYDVRDAAKALKE 284
+G I + NL + + L++ F+ G +K + K + F+EF + DA KA+K
Sbjct: 170 EGRIFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKT 229
Query: 285 MNGQEIYGKHVVIEFSRPGG 304
NG I K + +EFS GG
Sbjct: 230 RNGFPICDKFIRVEFSTSGG 249
>gi|325093178|gb|EGC46488.1| nuclear cap-binding protein [Ajellomyces capsulatus H88]
Length = 154
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAAKA 281
TI V LD V+ TL E F FG + ++ T L + ++EF D +DA +A
Sbjct: 10 TIYVGGLDQSVTLRTLTEAFLPFGKIADISLPKPEAPSSTDLHRGFGYVEFEDPQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEM 285
+ + L S V ++ L+E FQ +G ++E T + R F+ FYD DA A+ +M
Sbjct: 16 LFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDAIDQM 75
Query: 286 NGQEIYGKHVVI 297
G+E+ G+ + +
Sbjct: 76 TGKELCGRSIRV 87
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
K+I + FG +L E LK F+EF D RDA A+ E+NG+++ G+ V++E +R
Sbjct: 16 KDIQRFFGSYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 216 VPTCNAVP--DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEF 272
+P+ N P D + ++ V N+ + VS L+E+F + GPV+ + +K FI +
Sbjct: 25 IPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHY 84
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+D R AA A+ +NG+ ++G+ + + ++ G
Sbjct: 85 FDRRSAALAILSLNGRHLFGQPIKVNWAYASGQ 117
>gi|327261565|ref|XP_003215600.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Anolis
carolinensis]
Length = 634
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAVPDGNNQ-----GTIVVFNLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + + D + + + V NL + V+ L++ F FG
Sbjct: 315 RRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEILEKAFSQFGK 374
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANS 314
++ +++ K FI F + A KA++ MNG+E+ G+++ I F++P +K A
Sbjct: 375 LERVKKL---KDYAFIHFDERDGAVKAMEGMNGKELEGENIEIVFAKPPDQKRKERKAQR 431
Query: 315 SSCASSL 321
+ + +
Sbjct: 432 QAAKNQM 438
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 216 VPTCNAVP--DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-FIEF 272
+P+ N P D + ++ V N+ + VS L+E+F + GPV+ + +K FI +
Sbjct: 38 IPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHY 97
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+D R AA A+ +NG+ ++G+ + + ++ G
Sbjct: 98 FDRRSAALAILSLNGRHLFGQPIKVNWAYASGQ 130
>gi|91075992|ref|XP_970765.1| PREDICTED: similar to RNA binding motif protein 19 [Tribolium
castaneum]
gi|270014609|gb|EFA11057.1| hypothetical protein TcasGA2_TC004651 [Tribolium castaneum]
Length = 231
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKE-----LRETPLKKHQRFIEFYDVRDAAKALKE 284
T+ + NL+ + LK+IF GP+ + LR T L + F+ F+ DA A+ +
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYTHLNRGFAFVRFHREADALYAISK 191
Query: 285 MNGQEIYGKHVVIEFSRPGG 304
++ +E+ G+++ + +R G
Sbjct: 192 LDRKEVQGRNMCLAMARLGA 211
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 32/182 (17%)
Query: 133 EMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMN------NDNNNNNLATGCYDNQVV--- 183
E A ++I E+ +L++ + + G++ M D + A N VV
Sbjct: 563 EAALEKIFERCGKLRKVTVARRKDPKRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGH 622
Query: 184 AESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSS 243
A +L + A P A G V G + I+V N+ +S+
Sbjct: 623 ALNLKLSQKKASAAPKRAVGEVDGE-----------------GRKSKIIVRNVAFEATSN 665
Query: 244 TLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
++E+F AFG +K +R P K R F+EF ++A A + +YG+H+V+E
Sbjct: 666 EIRELFGAFGQLKRVR-MPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLE 724
Query: 299 FS 300
++
Sbjct: 725 WA 726
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGG 304
+K +G + G + +EF R GG
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGG 83
>gi|189206780|ref|XP_001939724.1| negative regulator of differentiation 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975817|gb|EDU42443.1| negative regulator of differentiation 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 827
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 59 VGYAQYPTHPQLGVPLPPPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM 118
+G+ + P+ V L +G +R + L + DVSE +R DL FG + V++ R
Sbjct: 259 IGWGK-PSQVPTSVALAVQQSGASRNVYLGNLSEDVSEEELREDLSKFGPIDTVKIVR-E 316
Query: 119 EGIVTVHFYDLRHAEMAFKEI-REQHMQLQQQSYGLKN--PYSSGLMLMNNDNNNNNLAT 175
+ I VHF + +A A ++ +E Q ++ Y K+ Y S N
Sbjct: 317 KAIGFVHFLSIGNAIKAVSQLPQEAKWQAPRRVYYGKDRCAYVSKTQQQN---------- 366
Query: 176 GCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDG-NNQGTIVVF 234
A+ L I YA VL R +++ G NN G V+
Sbjct: 367 -------AAQYLGIAPGYAHVLNGADRDMISNALAQQSVAAAAVATSAGGVNNLGNRTVY 419
Query: 235 NLDSGVSSSTLKEIFQAF--GPVKELRETPLKKHQRFIEFYDVRDAAK--ALKEMNGQEI 290
L + +T++EI G + +R P KH F+ F D AA AL + G I
Sbjct: 420 -LGNIHPETTIEEICNVVRGGLLHHIRYIP-DKHICFVTFIDPTSAASFYALSNLQGLMI 477
Query: 291 YGKHVVIEFSRPGG 304
+ + + I + + G
Sbjct: 478 HNRRLKIGWGKHSG 491
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LD+ V+ LK +F +G + ++ P K F++F + A +AL+ +N
Sbjct: 258 NNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLN 316
Query: 287 GQEIYGKHVVIEFSRP-----GGHSKKFFYANSSSCASSLNYS 324
G ++ G V + + R G +F+Y Y+
Sbjct: 317 GVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYT 359
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+++
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|395334747|gb|EJF67123.1| hypothetical protein DICSQDRAFT_96232 [Dichomitus squalens LYAD-421
SS1]
Length = 644
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ + N+ SS ++++F+ G +K + + F+ +YD+R A +A + G E
Sbjct: 176 TLFIRNIKYETSSEDVRQLFEEHGEIKTFFDLIANRGMVFVTYYDLRAAERARDRLQGSE 235
Query: 290 IYGKHVVIEFSRP 302
I G+ + + +S P
Sbjct: 236 ISGRPIDVHYSLP 248
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 205 VAGRPVWAQFIVPT-----CNAVPDGNNQGTIVVFNLDSG----VSSSTLKEIFQAFGPV 255
++GRP+ + +P + D QG ++V +S + + ++ FQ FG V
Sbjct: 236 ISGRPIDVHYSLPRDDQRGADRQKDQELQGNLIVTLRNSPTNQPIDDNEVRRKFQQFGDV 295
Query: 256 KELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
K +R + QR++EFYD R +A + Q + + I ++ P
Sbjct: 296 KSVRPYGERPDQRYVEFYDTRACEEAHDRLRHQGLQDGVMEIVYASP 342
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V NL S L E F ++G VK +R ET K +++F D+ A KA E
Sbjct: 401 TLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAHDE 460
Query: 285 MNGQEIYGKHVVIEFSRP 302
G +I G+ V +++ RP
Sbjct: 461 GAGMDIAGRAVRLDYQRP 478
>gi|119190143|ref|XP_001245678.1| hypothetical protein CIMG_05119 [Coccidioides immitis RS]
gi|320033029|gb|EFW14979.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
gi|392868585|gb|EAS34386.2| peptidyl prolyl cis-trans isomerase Cyclophilin [Coccidioides
immitis RS]
Length = 152
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETP----LKKHQRFIEFYDVRDAAKA 281
TI V LD GV++ TL E F FG + ++ E P L + ++EF +DA +A
Sbjct: 10 TIYVGGLDQGVTAQTLAEAFIPFGEIADITLPKPELPSSADLHRGFGYVEFELAQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|33874520|gb|AAH15575.1| SYNCRIP protein, partial [Homo sapiens]
Length = 417
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRP 302
+ G+++ I F++P
Sbjct: 396 LEGENIEIVFAKP 408
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 61 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 119
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 120 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 151
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGG 304
+K +G + G + +EF R GG
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGG 83
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR--- 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 16 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR 72
Query: 302 --------PGGHSKKFFYANSSSCASSLNYSTIYQTRNSD 333
HSK ++ A + Y+ ++ R ++
Sbjct: 73 RDGSYGSGRSKHSKGILLSDYMRQAGEVTYADAHKGRKNE 112
>gi|345320008|ref|XP_001511604.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R
[Ornithorhynchus anatinus]
Length = 479
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFI-VPTCNAV--PDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L++G+ VW + V + V PD + V NL + V+ L++ F FG
Sbjct: 307 RRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGK 366
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
++ +++ K F+ F D A KA+ EMNG+E+ G+ + I ++P +K
Sbjct: 367 LERVKKL---KDYAFVHFEDRGAAVKAMDEMNGKELEGEEIEIVLAKPPDKKRK 417
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V L S VS TL +FQ FG V++++ P K+ F+++ +A A+ M G
Sbjct: 395 TVFVGGLSSEVSEQTLFALFQPFGVVQQIK-IPPGKNCGFVKYSTREEAEDAIASMQGYI 453
Query: 290 IYGKHVVIEFSRPGGHSKKF 309
I G V + + R ++KKF
Sbjct: 454 IGGNRVRLSWGRVSVNNKKF 473
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD V+ S + E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK I ++ H K
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNL 96
>gi|326469666|gb|EGD93675.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS
112818]
gi|326478803|gb|EGE02813.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Trichophyton
equinum CBS 127.97]
Length = 152
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAA 279
+GTI V LD V+ TL E F FG + ++ T L + +IEF +DA
Sbjct: 8 KGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEFELPQDAK 67
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
+A+ M+ E+YG+ + + ++P
Sbjct: 68 EAIDNMDQSELYGRTIKVAAAKP 90
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL---RETPLKKHQ--RFIEFYDVR 276
+ + N TI V LD VS + + E+F GPV + ++ + HQ F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSDTLMWELFVQAGPVVNVHMPKDRVTQSHQGYGFVEFLAED 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N S L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANVFIGNLDSEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + + + FA
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGFA 145
>gi|315050730|ref|XP_003174739.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
gi|311340054|gb|EFQ99256.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 228 QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR--------ETPLKKHQRFIEFYDVRDAA 279
+GTI V LD V+ TL E F FG + ++ T L + +IEF +DA
Sbjct: 8 KGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEFELPQDAK 67
Query: 280 KALKEMNGQEIYGKHVVIEFSRP 302
+A+ M+ E+YG+ + + ++P
Sbjct: 68 EAIDNMDQSELYGRTIKVAAAKP 90
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPV-----KELRETPLKKHQRFIEFYDVRDAAKA 281
N+ I V NL + + ++++F FG V K R P F+EF D RDA A
Sbjct: 5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFA----FVEFEDARDADDA 60
Query: 282 LKEMNGQEIYGKHVVIEFSRPGG 304
+K +G + G + +EF R GG
Sbjct: 61 VKARDGYDYDGYRLRVEFPRGGG 83
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 214 FIVPTCNAVPD---------GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
I+ C A D + ++V N+ + L+++F FG +K LR P+K
Sbjct: 838 LILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMK 896
Query: 265 --KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+EF ++A AL+ ++ +YG+H+V+E ++ G
Sbjct: 897 FGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLVMERAKEG 939
>gi|401409123|ref|XP_003884010.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
gi|325118427|emb|CBZ53978.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
Length = 145
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L V L+ F FG +K+L + T L + FIEF + DA +A++
Sbjct: 22 TLYVGGLAEEVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFIEFEEEDDAKEAMEN 81
Query: 285 MNGQEIYGKHVVIEFSRPGGHS 306
M+ E+YG+ + + SR GG +
Sbjct: 82 MDNAELYGRTLRVNLSRSGGFA 103
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+N +E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNSKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|7505166|pir||T16535 hypothetical protein K02F3.11 - Caenorhabditis elegans
Length = 304
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVRDAAKALKE 284
+V+ NL V + L+EIF +G +K + P + H ++E+ ++ DA K++K
Sbjct: 150 VVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKH 209
Query: 285 MNGQEIYGKHVVIEFS 300
M+G +I G V +E +
Sbjct: 210 MDGGQIDGMAVHVEMT 225
>gi|195568864|ref|XP_002102432.1| GD19510 [Drosophila simulans]
gi|194198359|gb|EDX11935.1| GD19510 [Drosophila simulans]
Length = 273
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV- 275
P A G+ ++V NLD GVS++ +KE+F FGP+K+ + R + DV
Sbjct: 97 PKRGAAGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKA-AVHYDRSGRSLGTADVI 155
Query: 276 ----RDAAKALKEMNGQEIYGKHVVIEFS 300
DA KA+K+ +G + G+ + I+ +
Sbjct: 156 FERRADALKAIKQYHGVPLDGRPMTIQLA 184
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V N+ G+S + +IF + G V R ET K F E+ D AA A++ +
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 286 NGQEIYGKHVVIEFSRPGG-------HSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPP 338
N EI G+ + ++FS GG H + A ++S AS+ T+ S PP P
Sbjct: 69 NDYEIMGRKLRVDFSNEGGSDGNDDNHGHQGRDAGNTSYASNGYNPAAPPTQPSTLPPLP 128
Query: 339 LSADPP 344
+ P
Sbjct: 129 AGKELP 134
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK--KHQR---FIEFYDVRDAA 279
G T+V+ N+ VS L+ +F+++G +K LR P K +H R F+EF +A
Sbjct: 567 GRPTSTLVIKNVPFEVSKKELQALFKSYGNIKSLR-MPRKADRHTRGFAFVEFRSTAEAK 625
Query: 280 KALKEMNGQEIYGKHVVIEF 299
+A + ++ + G+H+VIE+
Sbjct: 626 EAKQALSQTHLLGRHLVIEY 645
>gi|303322531|ref|XP_003071257.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110959|gb|EER29112.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 154
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETP----LKKHQRFIEFYDVRDAAKA 281
TI V LD GV++ TL E F FG + ++ E P L + ++EF +DA +A
Sbjct: 10 TIYVGGLDQGVTAQTLAEAFIPFGEIADITLPKPELPSSADLHRGFGYVEFELAQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|195344125|ref|XP_002038639.1| GM10513 [Drosophila sechellia]
gi|194133660|gb|EDW55176.1| GM10513 [Drosophila sechellia]
Length = 266
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDV- 275
P A G+ ++V NLD GVS++ +KE+F FGP+K+ + R + DV
Sbjct: 97 PKRGAAGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKA-AVHYDRSGRSLGTADVI 155
Query: 276 ----RDAAKALKEMNGQEIYGKHVVIEFS 300
DA KA+K+ +G + G+ + I+ +
Sbjct: 156 FERRADALKAIKQYHGVPLDGRPMTIQLA 184
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 212 AQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIE 271
A + P N + N TI V LD V+ TL+ +F +G + ++ P K F++
Sbjct: 252 ATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVK-IPAGKRCGFVQ 310
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
F + A +AL +NG +I G+++ + + R
Sbjct: 311 FANRTSAEQALSMLNGTQIAGQNIRLSWGR 340
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
K++ + FG +L E LK F+EF D RDA A+ E+NG+++ G+ V+IE +R
Sbjct: 16 KDLQRFFGGYGKLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIIEHAR 71
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 214 FIVPTCNAVPDGNNQGT-----------IVVFNLDSGVSSSTLKEIFQAFGPVKELRETP 262
I+ CN D +QG ++V N+ + L+++F +G +K LR P
Sbjct: 679 LILQMCNVKKD--DQGKRKVDKEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLR-LP 735
Query: 263 LK--KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
+K KH+ F+EF ++A A + ++ +YG+H+V+E ++ G
Sbjct: 736 MKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLERAKEG 780
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+N +E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNSKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 1 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 54
>gi|149018946|gb|EDL77587.1| rCG25340, isoform CRA_c [Rattus norvegicus]
gi|149018949|gb|EDL77590.1| rCG25340, isoform CRA_c [Rattus norvegicus]
Length = 462
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 241 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 297
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+++ I F++P +K
Sbjct: 298 LEGENIEIVFAKPPDQKRK 316
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|118359250|ref|XP_001012866.1| hypothetical protein TTHERM_00094120 [Tetrahymena thermophila]
gi|89294633|gb|EAR92621.1| hypothetical protein TTHERM_00094120 [Tetrahymena thermophila SB210]
Length = 1438
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 246 KEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+++ FG E+ + K+ FIEF D AA+A+KEMNG + G +V+E +RP
Sbjct: 1231 EDLLNLFGRYGEITDIMRKEDYAFIEFGDSSFAAQAVKEMNGYNLNGTKIVVEGARPKDE 1290
Query: 306 SKK 308
+K+
Sbjct: 1291 AKE 1293
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 251 AFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRP 302
FG EL + +K F+EF AAKAL MNG + G +V+E +RP
Sbjct: 1316 TFGGYGELVDILMKDDYAFVEFTTTHAAAKALASMNGARLAGTKIVVEEARP 1367
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 224 DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELR--ETPLKKHQR---FIEFYDVRDA 278
D NN I V +L V ++ L++ F+ FG + E+R + P K + F+ F DA
Sbjct: 82 DTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDA 141
Query: 279 AKALKEMNGQEIYGKHV 295
AKA+ EM+ I GK V
Sbjct: 142 AKAIAEMDSVTIGGKQV 158
>gi|150003039|ref|YP_001297783.1| RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212690527|ref|ZP_03298655.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|237708016|ref|ZP_04538497.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754197|ref|ZP_06089386.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294775663|ref|ZP_06741171.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319642186|ref|ZP_07996846.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345515924|ref|ZP_08795421.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|345518203|ref|ZP_08797658.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|423229914|ref|ZP_17216319.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|423241567|ref|ZP_17222679.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|423247004|ref|ZP_17228055.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|423314856|ref|ZP_17292788.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
gi|149931463|gb|ABR38161.1| putative RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212666876|gb|EEB27448.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|229436554|gb|EEO46631.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|229458002|gb|EEO63723.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|254836470|gb|EET16779.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|263234906|gb|EEZ20461.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294450507|gb|EFG18999.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317386172|gb|EFV67091.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392632705|gb|EIY26663.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|392633765|gb|EIY27703.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|392641153|gb|EIY34938.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|392681038|gb|EIY74400.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
Length = 81
Score = 44.7 bits (104), Expect = 0.076, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEMNG 287
V NL+ V L++ A+G V + RET K F+E + +AA+A+ E+NG
Sbjct: 5 VGNLNYRVKEGDLEQAMAAYGVVTSVKVIKDRETGKSKGFAFVEMENDAEAAQAMNELNG 64
Query: 288 QEIYGKHVVIEFSRP 302
E G+ +VI+ +RP
Sbjct: 65 SEFMGRQLVIKEARP 79
>gi|449676978|ref|XP_002157894.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Hydra
magnipapillata]
Length = 623
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 202 RGLVAGRPVWAQFIVPTCNAV-----PDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFG 253
R + GR I PT + PD N + V NL + + L E+F+ +G
Sbjct: 306 RRFMTGRIKVFGNITPTVDWADPVEEPDDNVMSKVKVVYVRNLSPAIEETKLNELFKQYG 365
Query: 254 PVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYAN 313
V+++++ K FI F + DA +A++E+NGQ++ + + ++P ++K
Sbjct: 366 AVEKVKKL---KDYAFIHFVNRDDAVRAIEELNGQDLDDLKIEVSLAKP--QTEKKEARR 420
Query: 314 SSSCASSLNYS 324
S SLN S
Sbjct: 421 GQSGFGSLNQS 431
>gi|258565461|ref|XP_002583475.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907176|gb|EEP81577.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 152
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL--------RETPLKKHQRFIEFYDVRDAAKA 281
TI V LD V++ TL E F FG + ++ T L + ++EF +DA +A
Sbjct: 10 TIYVGGLDQAVTAQTLAEAFIPFGEIADITLPKPELPSSTDLHRGFGYVEFEMAQDAKEA 69
Query: 282 LKEMNGQEIYGKHVVIEFSRP 302
+ M+ E+YG+ + + ++P
Sbjct: 70 IDNMDQSELYGRIIKVAAAKP 90
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 214 FIVPTCNAVPDGNNQGT-----------IVVFNLDSGVSSSTLKEIFQAFGPVKELRETP 262
I+ CN D +QG ++V N+ + L+++F +G +K LR P
Sbjct: 682 LILQMCNVKKD--DQGKRKVDKEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLR-LP 738
Query: 263 LK--KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
+K KH+ F+EF ++A A + ++ +YG+H+V+E ++ G
Sbjct: 739 MKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLERAKEG 783
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 217 PTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIE 271
PTC TI+V N+ + + ++E+F FG +K +R P K R F++
Sbjct: 743 PTC----------TILVKNVAFEATKAEIRELFATFGQLKSVR-VPKKMDGRARGFAFVD 791
Query: 272 FYDVRDAAKALKEMNGQEIYGKHVVIEF 299
F ++A A + + +YG+H+V+EF
Sbjct: 792 FITKQEAKNAFQSLQDTHLYGRHLVLEF 819
>gi|221501413|gb|EEE27190.1| cold-inducible RNA binding protein, putative [Toxoplasma gondii
VEG]
Length = 1335
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
++ + V N V +++ IF FG + E++ + KH + + D A +A++E+N
Sbjct: 174 DERKVFVGNTPLAVREPSVERIFGEFGKLSEIK---IFKHFLHLTYDDATAATRAVEELN 230
Query: 287 GQEIYGKHVVIEFSRPGGHSKK 308
+E++G +V+E RPG S++
Sbjct: 231 DKEVWGAQIVVEPLRPGAASQR 252
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 221 AVPDGNN--QGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDA 278
A PDG + T+ V LD VS L++ F +G + ++ P+ K F++F ++A
Sbjct: 278 ARPDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVK-IPVGKQCGFVQFAQRKNA 336
Query: 279 AKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNYSTIYQTRNSDCPPPP 338
AL+ +NG I + V + + R + K A ++C+ T + R++
Sbjct: 337 EDALQGLNGSTIGKQAVRLSWGR--NPANKQLGATMATCSGRTGACTTRRPRSTTAATAT 394
Query: 339 LSADPPSYSPRSFASQAPHFRKKSPSNSF 367
L PRS + +P+ S
Sbjct: 395 LR------RPRSLIQACTLLQPTAPTRSM 417
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+N +E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNSKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+N +E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNSKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 196 VLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV 255
P RG G PV + +++G + V L + +L+++F +G +
Sbjct: 20 ACPRSVRGASPGGPVTPESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQI 79
Query: 256 KEL-----RETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIE 298
E+ RET + F+ F ++ DA A+ MNG+ + G+ + ++
Sbjct: 80 SEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 127
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|238585218|ref|XP_002390799.1| hypothetical protein MPER_09865 [Moniliophthora perniciosa FA553]
gi|215454652|gb|EEB91729.1| hypothetical protein MPER_09865 [Moniliophthora perniciosa FA553]
Length = 192
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 248 IFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF--SR 301
+F+ +GPVKE+R E + K F+EF DV+DA AL E N QE+ + + + SR
Sbjct: 10 LFRQYGPVKEVRLATEENGVSKGYAFVEFEDVKDAQAAL-EANNQELRNRRIAVTLADSR 68
Query: 302 PGGHSKKF 309
+ KF
Sbjct: 69 AKARNAKF 76
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|6469493|emb|CAB61832.1| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 167
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 215 IVPTCNAVPDG-NNQGTIVVFN-LDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQ 267
+ + N++ G NN GT ++ N L + L +F+ GP+ R +T
Sbjct: 48 MANSTNSLNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGY 107
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
F++F DA +A+ +NG + K + + F+RPGG
Sbjct: 108 GFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGE 145
>gi|331231467|ref|XP_003328397.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307387|gb|EFP83978.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 315
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 219 CNAVPDGNNQGTIVVFNLDSGVS----SSTLKEIFQAFGPVKEL--RETPLKKHQRFIEF 272
+ +PD + T+ + NL+ V TLK + + FGPV ++ + + Q F+ F
Sbjct: 70 VDKIPDDATE-TVYLNNLNERVKLPALKQTLKNLLKNFGPVLDVVAHRSVRMRGQAFVAF 128
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
D AAKA+KE+ G +YGK + I F+R
Sbjct: 129 PDREMAAKAVKEVKGFPLYGKPIEIAFAR 157
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I V L+ ++ F+ +G +R+ LK+ F+EF D RDA A+ E++G+E+
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYG---RIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 291 YGKHVVIEFSR 301
+ V IE +R
Sbjct: 63 CNERVTIEHAR 73
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|410915937|ref|XP_003971443.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Takifugu rubripes]
Length = 598
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F +G ++ +++ K FI F + A KAL+EMNG+E
Sbjct: 304 VLFVRNLANSVTEEILEKSFSEYGNLERVKKL---KDYAFIHFEERDGAVKALEEMNGKE 360
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+ + I F++P +K
Sbjct: 361 LEGEPIEIVFAKPPDQKRK 379
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI LD VS + L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYAN-SSSCASSLNYSTIYQT 329
DA A+K MN ++YGK I ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P L DP + + FA
Sbjct: 123 FGVILQTPKLMRDPETGKSKGFA 145
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD VS + L E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF------FYANSS-SCASSLNYSTIYQT 329
DA A+K MN ++YGK + + ++ H K F N L Y T +
Sbjct: 66 DADYAIKIMNMIKLYGKPIRV--NKASAHQKNLDVGANIFIGNLDPEVDEKLLYDT-FSA 122
Query: 330 RNSDCPPPPLSADPPSYSPRSFA 352
P + DP + + + FA
Sbjct: 123 FGVILQTPKIMRDPETGNSKGFA 145
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ----RFIEFYDVRD 277
+P G + V NL + V +++IF +G +K + +K + FIEF D RD
Sbjct: 1 MPRGGEDQKVYVGNLPADVRDKEVEDIFHKYGRIKYI---DVKSGRGPAFAFIEFEDNRD 57
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPGG 304
A A++ +G E G+ + +EF+R G
Sbjct: 58 AEDAVRARDGYEFDGRRIRVEFTRGVG 84
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR-----FIEFYDVRDAAKALKE 284
T+ V L + S +K F+++GP+K +R K + FIE+ RD A K+
Sbjct: 142 TLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQ 201
Query: 285 MNGQEIYGKHVVIEFSR 301
+G++I G+ V+++ R
Sbjct: 202 ADGRKIDGRRVLVDVER 218
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
T+ + NL GV + ++E+F++ G ++ +R ET K ++EF V +A +AL +
Sbjct: 331 TLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGYGYVEFSSVDEARQALND 390
Query: 285 MNGQEIYGKHVVIEFSRP 302
+ G +I G+ + ++FS P
Sbjct: 391 LQGTDIGGRAIRLDFSTP 408
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 214 FIVPTCNAVPDG---------NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 734 LILQLCHVKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMK 792
Query: 265 --KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+E+ ++A AL+ + +YG+H+VIE ++ G
Sbjct: 793 FGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIERAKEG 835
>gi|154494359|ref|ZP_02033679.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|423346931|ref|ZP_17324618.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|423725455|ref|ZP_17699592.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
gi|154085803|gb|EDN84848.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|409218592|gb|EKN11560.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|409234579|gb|EKN27407.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
Length = 80
Score = 44.7 bits (104), Expect = 0.084, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
I V NL+ V LK++ + +G V+ + RET K F+E D A KA+ E+
Sbjct: 3 IYVGNLNYRVREDDLKQVMEEYGTVESVKIIKDRETGKSKGFGFVEMPDDEAAKKAIAEL 62
Query: 286 NGQEIYGKHVVIEFSRP 302
N E G+ +VI+ +RP
Sbjct: 63 NEAEYEGRQIVIKEARP 79
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V +L S +++ F+ +G + RE LK F+EF D RDA A+ E+NG+E+
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRI---REIHLKNGFGFVEFEDHRDADDAIYELNGKEL 62
Query: 291 YGKHVVIEFSRPGGH----SKKFFYANSSSCAS 319
+ V IE +R S++F Y S+S +S
Sbjct: 63 CDERVTIEHARARRGRGRFSQRFSYYQSTSGSS 95
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|357617562|gb|EHJ70861.1| hypothetical protein KGM_04943 [Danaus plexippus]
Length = 668
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 202 RGLVAGR-PVWAQFIVPTC---NAVPDGNNQGTIVVF---NLDSGVSSSTLKEIFQAFGP 254
R L GR VW I+ PD + V NL ++ LKE F+ +G
Sbjct: 359 RRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQEITEEALKEEFERYGN 418
Query: 255 VKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKK 308
V+ +++ K F+ F D A KA++E++G+E+ G + + ++P KK
Sbjct: 419 VERVKKI---KDYAFVHFEDRDCAVKAMQEIDGKELGGARLEVSLAKPPSDKKK 469
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 216 VPTCNAVP--DGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-RFIEF 272
+P+ N P D + ++ V N+ V+ + L E+F GP++ + +K F+++
Sbjct: 40 IPSGNLPPGFDATSCRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSSYGFVDY 99
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGH 305
+D R AA A+ +NG+ I+G+ + + ++ G
Sbjct: 100 FDHRSAAAAIITLNGKLIFGQSIKVNWAYASGQ 132
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQRFIEFYDVRDAAKALKE 284
++ V N+ V+ LKEIF G V R ET K F E+ D A A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 285 MNGQEIYGKHVVIEFSRPGGHS 306
+NG EI G+++ ++F+ G S
Sbjct: 74 LNGYEINGRNLRVDFADGGDKS 95
>gi|237845207|ref|XP_002371901.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211969565|gb|EEB04761.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1335
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
++ + V N V +++ IF FG + E++ + KH + + D A +A++E+N
Sbjct: 174 DERKVFVGNTPLAVREPSVERIFGEFGKLSEIK---IFKHFLHLTYDDATAATRAVEELN 230
Query: 287 GQEIYGKHVVIEFSRPGGHSKK 308
+E++G +V+E RPG S++
Sbjct: 231 DKEVWGAQIVVEPLRPGAASQR 252
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
GN I V +L S S L++ F +G ++ + F+EF D RDA A++
Sbjct: 11 GNPDCKIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRG 70
Query: 285 MNGQEIYGKHVVIEFSRPG 303
++G+ I G+ V +E S G
Sbjct: 71 LDGRSICGRRVRVELSNAG 89
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 12 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 65
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+N +E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEIDLKNGYGFVEFEDSRDADDAVYELNSKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
>gi|254416097|ref|ZP_05029852.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196177030|gb|EDX72039.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 44.7 bits (104), Expect = 0.086, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
+I V NLD V+S L E+F +G VK + RET + F+E + A A+ E
Sbjct: 2 SIYVGNLDYSVTSEDLSEVFAEYGTVKRVHLPTDRETGRLRGFGFVEMGTEDEEASAISE 61
Query: 285 MNGQEIYGKHVVIEFSRP 302
+NG E G+ + + +RP
Sbjct: 62 LNGAEWMGRELKVNQARP 79
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 37/243 (15%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+R L L ++P D +E ++ L FG+V + M L+ AF E+
Sbjct: 13 PSRVLHLRHIPSDATEEVLSLALP-FGKVTNILM--------------LKGKRQAFSEVG 57
Query: 141 EQHMQLQQQSYGLKNPYSSGLMLMNND------NNNNNLATGCYDNQVVAESLMIMNSYA 194
+ + + + N Y+S L+++ +N L T +Q AE++
Sbjct: 58 TE-----EPAVNVMNYYASAAPLLHSQPLFIQYSNPRELRTDYLPDQARAEAM------- 105
Query: 195 PVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGP 254
P L +PV A + PD I+V N+ +S L EI FGP
Sbjct: 106 --FHPVDTTLFESQPV-ASASEARDDPFPDVRCVLRIIVDNVSHHISLEMLHEILSPFGP 162
Query: 255 V-KELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYAN 313
V + + T K Q E+ + R A A K +NGQ I+ I S Y N
Sbjct: 163 VLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLNGQGIFTSDCFIRVDYSKFTSLAIKYNN 222
Query: 314 SSS 316
S
Sbjct: 223 EKS 225
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + + + L+ F +GP++ + F+EF D RDAA A++E+NG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGRT 70
Query: 290 IYGKHVVIEFS 300
+ G V +E S
Sbjct: 71 LCGCRVRVELS 81
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ + L ++ + E F FG ++ + RET K ++EF DV A AL+
Sbjct: 312 TLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEA 371
Query: 285 MNGQEIYGKHVVIEFSRP 302
MNG+E+ G+ + +++S P
Sbjct: 372 MNGKELSGRRIRVDYSGP 389
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD V+ S + E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK I ++ H K
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNL 96
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 224 DGNNQ-GTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKAL 282
DG++ TI V LD V+ LK+ F +G + ++ P+ K F++F + +A +AL
Sbjct: 293 DGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVK-IPVSKGCGFVQFANRNNAEEAL 351
Query: 283 KEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSCASSLNY-STIYQTRNSDCPPPPLSA 341
+++NG I + V + + R GH K A+ SS + Y +Y PPP
Sbjct: 352 QKLNGTVIGKQTVRLSWGRNPGH--KQHRADFSSPWNGAYYGGQVYDGYGYALPPP---H 406
Query: 342 DPPSYS 347
DP +Y+
Sbjct: 407 DPSTYA 412
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
+++G + V L + +L+++F +G + E+ RET + F+ F ++ DA
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKD 62
Query: 281 ALKEMNGQEIYGKHVVIE 298
A+ MNG+ + G+ + ++
Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>gi|149018945|gb|EDL77586.1| rCG25340, isoform CRA_b [Rattus norvegicus]
gi|149018948|gb|EDL77589.1| rCG25340, isoform CRA_b [Rattus norvegicus]
Length = 458
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 241 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 297
Query: 290 IYGKHVVIEFSRPGGHSKK 308
+ G+++ I F++P +K
Sbjct: 298 LEGENIEIVFAKPPDQKRK 316
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD V+ S L E+F GP+ + R T + + F+EF
Sbjct: 6 IAERNRDATIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK I ++ H K
Sbjct: 66 DADYAIKIMNMIKLYGKP--IRVNKASAHQKNL 96
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 214 FIVPTCNAVPDG---------NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLK 264
I+ C+ DG + ++V N+ + L+++F FG +K LR P+K
Sbjct: 473 LILQLCHGKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMK 531
Query: 265 --KHQ--RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
H+ F+E+ ++A AL+ + +YG+H+VIE ++ G
Sbjct: 532 FGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIERAKEG 574
>gi|388514621|gb|AFK45372.1| unknown [Medicago truncatula]
Length = 168
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL----KKHQRF--IEFYDVRDA 278
G + T+ V L V+ S L F FG +K+++ TPL +KH+ F + F + DA
Sbjct: 4 GVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEREDA 62
Query: 279 AKALKEMNGQEIYGKHVVIEFSRP 302
+ A+ M+G E+YG+ + + ++ P
Sbjct: 63 SAAMDNMDGAELYGRVLTVNYALP 86
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ-----RFIEFYDVRD 277
P GNN I V NL + + ++++F +G + R+ LK + F+EF D RD
Sbjct: 10 PAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAI---RDIDLKNRRGGPPFAFVEFEDPRD 66
Query: 278 AAKALKEMNGQEIYGKHVVIEF 299
A A+ +G + YG + +EF
Sbjct: 67 AEDAVYGRDGYDYYGYRLRVEF 88
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 222 VPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVR 276
+ + N TI V LD V+ S + E+F GPV + R T + + F+EF
Sbjct: 6 IAERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEE 65
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
DA A+K MN ++YGK I ++ H K
Sbjct: 66 DADYAIKIMNMIKLYGK--PIRVNKASAHQKNL 96
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
>gi|118377179|ref|XP_001021770.1| RNA binding protein [Tetrahymena thermophila]
gi|89303537|gb|EAS01525.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 137
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRE--TPLKKHQRFIEFYDVRDAAKALKEMNG 287
+ V NL +S+ L ++F +GP++++R+ + KK F+ + D+ DA A++ +NG
Sbjct: 34 VVYVRNLPYKISAEELYDVFGTYGPIRQIRKGVSGDKKGTAFVVYEDIFDAKTAVEHLNG 93
Query: 288 QEIYGKHVVIEFSRPGGHSKK 308
+ G+++++ + +P +KK
Sbjct: 94 FNVAGRYLIVLYYQPHKINKK 114
>gi|118356855|ref|XP_001011681.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila]
gi|89293448|gb|EAR91436.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila
SB210]
Length = 302
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELR--ETPLKKHQ--RFIEFYDVRDAAKALKEM 285
T+++FN+ V+ S LKE F+ +GP+K R +KH+ FIEF D A K
Sbjct: 194 TLLIFNISYNVNESKLKEHFKVYGPIKSCRIIRNQNQKHRGYGFIEFERKNDFISAYKNA 253
Query: 286 NGQEIYGKHVVIEFSR 301
+ ++I G+ + ++ R
Sbjct: 254 HEKKIDGRRIGVDIER 269
>gi|119193232|ref|XP_001247222.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320040131|gb|EFW22065.1| pre-mRNA branch site protein p14 [Coccidioides posadasii str.
Silveira]
gi|392863538|gb|EAS35707.2| pre-mRNA branch site protein p14 [Coccidioides immitis RS]
Length = 115
Score = 44.7 bits (104), Expect = 0.092, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRE--TPLKKHQRFIEFYDVRDAAK 280
P+ N + V NL V++ L ++F FGP++++R+ K F+ + DV DA +
Sbjct: 9 PEANR--ILFVKNLSYNVTADDLFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDAKQ 66
Query: 281 ALKEMNGQEIYGKHVVIEFSRPGGHSK 307
A ++NG +++V+ + +P +K
Sbjct: 67 ACDKLNGFNFQNRYLVVLYHQPEKMAK 93
>gi|58264326|ref|XP_569319.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223969|gb|AAW42012.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 444
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 210 VWAQFIVPTCN---------AVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRE 260
+WA+ I+ N + D +N I + NLDS ++S L+E F FG V R
Sbjct: 1 MWAEIILKQANQDVQVQSASGLVDYSN---IFIKNLDSDINSFYLEETFSQFGRVISAR- 56
Query: 261 TPLKKHQR-----FIEFYDVRDAAKALKEMNGQEIYGKHVV 296
HQR F+ FY +AA A+K MNG + +G+ V+
Sbjct: 57 VMRDDHQRSRGYGFVSFYTPEEAACAVKAMNGTQ-FGRQVL 96
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,083,175,526
Number of Sequences: 23463169
Number of extensions: 327094186
Number of successful extensions: 1382851
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 4880
Number of HSP's that attempted gapping in prelim test: 1373396
Number of HSP's gapped (non-prelim): 12364
length of query: 408
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 263
effective length of database: 8,957,035,862
effective search space: 2355700431706
effective search space used: 2355700431706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)