BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046223
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65001|TE1_MAIZE Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1
Length = 656
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 160/315 (50%), Gaps = 47/315 (14%)
Query: 5 GISRFQGNL-DPRAQEFRPTTLF------RPPQVYYPYGAASPPTLPPYPSNDVQVVPFG 57
G GNL D AQEF PT P Q+Y P+ + P PP +Q VP
Sbjct: 3 GFPEATGNLLDAAAQEFHPTVCAPYPLQPLPQQLYCPHPYPAMPVPPPPQIAMLQPVPPM 62
Query: 58 GVGYAQYPTHPQLGVPLP---PPSTGPT-RTLVLSYVPGDVSETIVRRDLEVFGEVRGVQ 113
+ A PQ G LP P GP+ R +VL VP E V + + FG +R V
Sbjct: 63 AMAMA-----PQPGYTLPTTTPVVNGPSSRVVVLGLVPPHAQEADVAQAMAPFGAIRSVD 117
Query: 114 MERLM-EGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNN 172
+ EG+ TVHF+D+R AE+A +REQHM+ Q + L Y++ +
Sbjct: 118 ACAVASEGVATVHFFDIRAAELALTCVREQHMRQQSR---LGQLYAAAAVAPAWAPAPTP 174
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPP---ARGLVAGRPVWAQFIVPTCNAVPDGNNQG 229
A +D P P RGLV G VWA F DG+N+G
Sbjct: 175 QA---WD-----------------WPHPNDDGRGLVLGHAVWAHF----ATGADDGDNRG 210
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
++VV + GVS + L+++FQAFG +K++RE+ + +F++F+D RDAA+AL E+NGQE
Sbjct: 211 SLVVLSPLPGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQE 270
Query: 290 IYGKHVVIEFSRPGG 304
++G+ +V+EF+RP G
Sbjct: 271 LFGRRLVVEFTRPSG 285
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 46/249 (18%)
Query: 68 PQLGVPLPPPST---GP-TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGIV 122
PQ G +P +T GP +R +VLS VP E + R + FG VR V + EG+
Sbjct: 79 PQPGYCVPAAATVVDGPASRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVA 138
Query: 123 TVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQV 182
TV+F+DLR AE A +REQH++ Q C Q+
Sbjct: 139 TVYFFDLRSAEHAVTGVREQHIRQQ-----------------------------CRLGQL 169
Query: 183 VAESLMIMNSYAPVLPPPA--------RGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVV 233
A + S +P PPPA RGLV G+ VWA F + VPD G ++G++VV
Sbjct: 170 YAAAAAAAAS-SPTWPPPAWDWPHDDNRGLVLGQAVWAHFA--AASTVPDDGASRGSLVV 226
Query: 234 FNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
N +S L+EIFQA+G VK++RE+ L+ +F+EF+D RDA +AL E+NG+E++G+
Sbjct: 227 LNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGR 286
Query: 294 HVVIEFSRP 302
+V+E++RP
Sbjct: 287 RLVVEYTRP 295
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 39 SPPTLPP----YPSNDVQVVPFGGVGYAQYPTHPQLGVPLPPPSTGPTR--TLVLSYVPG 92
S PT PP +P +D + + G +A + + P G +R +VL+ +P
Sbjct: 179 SSPTWPPPAWDWPHDDNRGLVLGQAVWAHFAAASTV------PDDGASRGSLVVLNSLPA 232
Query: 93 DVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHM 144
+S +R + +G+V+ V+ L V F+D R A+ A E+ + +
Sbjct: 233 -MSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKEL 283
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 46/249 (18%)
Query: 68 PQLGVPLPPPST---GP-TRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLM-EGIV 122
PQ G +P +T GP +R +VLS VP E + R + FG VR V + EG+
Sbjct: 79 PQPGYCVPAAATVVDGPASRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVA 138
Query: 123 TVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNNNLATGCYDNQV 182
TV+F+DLR AE A +REQH++ Q C Q+
Sbjct: 139 TVYFFDLRSAEHAVTGVREQHIRQQ-----------------------------CRLGQL 169
Query: 183 VAESLMIMNSYAPVLPPPA--------RGLVAGRPVWAQFIVPTCNAVPD-GNNQGTIVV 233
A + S +P PPPA RGLV G+ VWA F + VPD G ++G++VV
Sbjct: 170 YAAAAAAAAS-SPTWPPPAWDWPHDDNRGLVLGQAVWAHFA--AASTVPDDGASRGSLVV 226
Query: 234 FNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGK 293
N +S L+EIFQA+G VK++RE+ L+ +F+EF+D RDA +AL E+NG+E++G+
Sbjct: 227 LNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGR 286
Query: 294 HVVIEFSRP 302
+V+E++RP
Sbjct: 287 RLVVEYTRP 295
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 39 SPPTLPP----YPSNDVQVVPFGGVGYAQYPTHPQLGVPLPPPSTGPTR--TLVLSYVPG 92
S PT PP +P +D + + G +A + + P G +R +VL+ +P
Sbjct: 179 SSPTWPPPAWDWPHDDNRGLVLGQAVWAHFAAASTV------PDDGASRGSLVVLNSLPA 232
Query: 93 DVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHM 144
+S +R + +G+V+ V+ L V F+D R A+ A E+ + +
Sbjct: 233 -MSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKEL 283
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 10/125 (8%)
Query: 188 MIMNSYAPVLPPPARGLVAG--------RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSG 239
+M SY + ARG + G R + F +P N NQGT+V+FNLD
Sbjct: 235 FVMISYFDIRA--ARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLVIFNLDPS 292
Query: 240 VSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEF 299
VS+ +++IF +G VKE+RETP KKH +FIEFYDVR A AL+ +N EI GK + +E
Sbjct: 293 VSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAGKRIKLEP 352
Query: 300 SRPGG 304
SRPGG
Sbjct: 353 SRPGG 357
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V +T +R E +G++R + G V + ++D+R A A + ++
Sbjct: 195 PSRTLFVRNINSNVDDTELRSLFEQYGDIRTLYTATKHRGFVMISYFDIRAARGAMRGLQ 254
Query: 141 EQHMQLQQ 148
+ ++ ++
Sbjct: 255 NKPLRRRK 262
>sp|Q6EQX3|OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativa subsp. japonica GN=ML5 PE=2
SV=1
Length = 811
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGT+V+FNL+ VS+ L +IF AFG V+E+RETP K+H
Sbjct: 257 RKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHH 316
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKF 309
RFIEFYDVR A AL+ +N +I GK V +E SRPGG + F
Sbjct: 317 RFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPGGARRSF 358
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P+RTL + + +V ++ +R E FG++R + G V + +YD+RHA A
Sbjct: 191 PSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVMISYYDIRHARNA 245
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S L+ +F+ FG ++ + KH+ F I +YD+R A A +
Sbjct: 194 TLFVRNINSNVEDSELRSLFEPFGDIRSMYTA--TKHRGFVMISYYDIRHARNAKTALQS 251
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 252 KPLRRRKLDIHYSIP 266
>sp|Q9SJG8|AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis thaliana GN=ML2 PE=2 SV=2
Length = 843
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C V S + + + L+ R + F +P N NQGT+V
Sbjct: 227 LYTACKSRGFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLV 286
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
+FN+D+ VS+ L ++F A+G ++E+RETP ++ RFIE+YDVRDA ALK +N EI G
Sbjct: 287 IFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGG 346
Query: 293 KHVVIEFSRPGG 304
K + +E SRPGG
Sbjct: 347 KCIKLELSRPGG 358
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T+ V N++S V S L +F+ FG ++ L + I +YD+R A A++ +
Sbjct: 199 TLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQNTL 258
Query: 290 IYGKHVVIEFSRP 302
+ + + I FS P
Sbjct: 259 LRKRTLDIHFSIP 271
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 76 PPSTGPTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMA 135
P P+RTL + + V ++ + E FGE+R + G V + +YD+R A A
Sbjct: 191 PNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAA 250
Query: 136 FKEIR 140
+ ++
Sbjct: 251 MRALQ 255
>sp|Q9SVV9|AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis thaliana GN=ML3 PE=2 SV=2
Length = 759
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 30/274 (10%)
Query: 57 GGVG--YAQYPTHPQLGVPLPPPS----TGPTRTLVLSYVPGDVSETIVRRDLEVFGEVR 110
GG+G +HP +G LP +G L LS +P + + D ++FG
Sbjct: 57 GGIGNMLDDGDSHP-IGNMLPDDEEELFSGLMDDLNLSSLPATLDDL---EDYDLFGSGG 112
Query: 111 GVQMERLMEGIVTVHFYDLRHAEMAFKEIREQHM-QLQQQSYGLKNPYS---SGLMLMNN 166
G+++E + F + A+ + Q++ Q S ++PY S + + N
Sbjct: 113 GLELETDPYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRTLFVRN 172
Query: 167 DNNN----------------NNLATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPV 210
N+N L T C V S + + + L+ R +
Sbjct: 173 INSNVEDSELQALFEQYGHIRTLYTACKQRGFVMVSYNDIRASRAAMRALQGKLLKKRKL 232
Query: 211 WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFI 270
F +P N NQGT+VVFNL VS+ L+ IF +G +KE+RETP K+H +F+
Sbjct: 233 DIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFV 292
Query: 271 EFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
EF+DVR A ALK +N EI GK + +E SRPGG
Sbjct: 293 EFFDVRSADAALKALNRTEIAGKRIKLEHSRPGG 326
>sp|Q8VWF5|AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis thaliana GN=ML5 PE=1 SV=1
Length = 800
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + F +P N NQGT+VVFNLD +S+ L IF A G +KE+RETP K+H
Sbjct: 232 RKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRHH 291
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
+F+EFYDVR A ALK +N EI GK + +E SRPGG
Sbjct: 292 KFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGG 328
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ + E +G++R + G V + +YD+R A MA + ++
Sbjct: 166 PSRTLFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQ 225
Query: 141 EQ 142
+
Sbjct: 226 NK 227
>sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2
SV=1
Length = 1001
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 208 RPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQ 267
R + + +P N NQGTIV+FN+D +++ L +IF +G +KE+R+TP K H
Sbjct: 339 RKLDIHYSIPKDNPSEKDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHH 398
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHSKKFFYANSSSC 317
+ IEFYDVR A AL+ +N +I GK + +E SR G + + +S C
Sbjct: 399 KIIEFYDVRAAEAALRALNRNDIAGKKIKLETSRLGAARRLSQHMSSELC 448
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+ V N++S V S LK +F+ FG ++ L KH+ F I +YD+R A A E+
Sbjct: 276 TLFVRNINSNVEDSELKLLFEHFGDIRALYTAC--KHRGFVMISYYDIRSALNAKMELQN 333
Query: 288 QEIYGKHVVIEFSRP 302
+ + + + I +S P
Sbjct: 334 KALRRRKLDIHYSIP 348
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL + + +V ++ ++ E FG++R + G V + +YD+R A A E++
Sbjct: 273 PSRTLFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQ 332
Query: 141 EQHMQLQQ 148
+ ++ ++
Sbjct: 333 NKALRRRK 340
>sp|Q9LYN7|AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis thaliana GN=ML4 PE=1 SV=1
Length = 907
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 204 LVAGRPVWAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPL 263
L+ GR + ++ +P N + +++G + V NLDS +S+ L IF ++G ++E+R T
Sbjct: 271 LLRGRKLDIRYSIPKENP-KENSSEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMH 329
Query: 264 KKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGGHS 306
+ Q +IEF+DVR A AL+ +NG E+ G+ + + + P G S
Sbjct: 330 ENSQVYIEFFDVRKAKVALQGLNGLEVAGRQLKLAPTCPEGTS 372
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V N+DS + L +F+ FG V+ L + + +YD+R A KA + ++G+ +
Sbjct: 213 LFVRNVDSSIEDCELGVLFKQFGDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLL 272
Query: 291 YGKHVVIEFSRP 302
G+ + I +S P
Sbjct: 273 RGRKLDIRYSIP 284
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 213 QFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEF 272
QF P N ++G +VV N+DS +S+ L ++ +G VKE+ +P+ ++F+EF
Sbjct: 339 QFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEF 398
Query: 273 YDVRDAAKALKEMNGQEIYGKHVVIEFSRPG 303
YDVR A +AL ++N I G +E S+ G
Sbjct: 399 YDVRAAEEALHDLNKGGISGPKFKVELSQHG 429
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTLV+ + ++ ++ + + +G++R + G VTV +YD+R A+ A + +
Sbjct: 268 PSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALH 327
Query: 141 EQHMQLQQ 148
+ + L +
Sbjct: 328 SKPLGLMK 335
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRF--IEFYDVRDAAKALKEMNG 287
T+VV N+ + + S L +FQ +G ++ L + KH F + +YD+R A A++ ++
Sbjct: 271 TLVVRNITANIEDSDLTVLFQQYGDIRMLYTS--FKHHGFVTVSYYDIRAAQNAMRALHS 328
Query: 288 QEIYGKHVVIEFSRP 302
+ + + ++FS P
Sbjct: 329 KPLGLMKLDVQFSFP 343
>sp|Q8W4I9|AML1_ARATH Protein MEI2-like 1 OS=Arabidopsis thaliana GN=ML1 PE=1 SV=1
Length = 915
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 173 LATGCYDNQVVAESLMIMNSYAPVLPPPARGLVAGRPVWAQFIVPTCNAVPDGNNQGTIV 232
L T C + + S + + L+ G + ++ + N ++G ++
Sbjct: 246 LHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTSKGALL 305
Query: 233 VFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYG 292
V NLDS +S+ L + +++G VKE+R T Q +IEF+DVR AA AL +NG E+ G
Sbjct: 306 VNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAG 365
Query: 293 KHVVIEFSRPGG 304
K + + + P G
Sbjct: 366 KKLQLVPTYPEG 377
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
T++V N+ S V LK +F+ FG ++ L + + + D+R A A + + +
Sbjct: 218 TLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKL 277
Query: 290 IYGKHVVIEFS 300
+ G + I +S
Sbjct: 278 LRGTKLDIRYS 288
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 81 PTRTLVLSYVPGDVSETIVRRDLEVFGEVRGVQMERLMEGIVTVHFYDLRHAEMAFKEIR 140
P+RTL++ + +V + ++ E FG+++ + G + V + D+R A+ A + ++
Sbjct: 215 PSRTLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQ 274
Query: 141 EQHMQLQQ----QSYGLKNP----YSSGLMLMNN 166
+ ++ + S +NP S G +L+NN
Sbjct: 275 NKLLRGTKLDIRYSISKENPSQKDTSKGALLVNN 308
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis
elegans GN=rsp-1 PE=3 SV=1
Length = 312
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
I + L S VS ++ F+ +G ++R+ LK F+EF D RDA A+ ++NG+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYG---QIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 291 YGKHVVIEFSRP 302
G+ V++++S+P
Sbjct: 62 GGERVILDYSKP 73
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL SGVS++T+ F A+G V +R KH F+ F V A L+E+NG+ I
Sbjct: 594 LWVGNLPSGVSATTVATTFSAYGTVSSIRMLS-HKHSAFLNFDSVETAKHVLEELNGKRI 652
Query: 291 Y--GKHVVIEFSRPG------------GHSKKF-----------FYANSSSCASSLNY-- 323
+ V I F++ G +K F Y + + S +
Sbjct: 653 FFGSDPVCISFAKVASSSSESSHSAVDGLNKAFSNVSFVPSLREVYDDLINVVQSFGFKD 712
Query: 324 -STIYQTRNSDCPPPPLSADPPSYSPRSFASQ---APHFRK 360
S IYQ N+ C +A PS S ++F+S+ AP R+
Sbjct: 713 LSKIYQILNAACELTDFAAQIPSIS-KAFSSRRLNAPKLRQ 752
>sp|O35698|RBY1A_MOUSE RNA-binding motif protein, Y chromosome, family 1 member A1 OS=Mus
musculus GN=Rbmy1a1 PE=1 SV=2
Length = 380
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
N G I + L+ TL+EIF FGPV + RET + F+ F + DA
Sbjct: 5 NQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKN 64
Query: 281 ALKEMNGQEIYGKHVVIEFSR 301
A+KEMNG + GK + ++ +R
Sbjct: 65 AVKEMNGVILDGKRIKVKQAR 85
>sp|O74968|RU1A_SCHPO U1 small nuclear ribonucleoprotein usp102 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=usp102 PE=1 SV=1
Length = 249
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 63 QYPTHPQLGVPLPPP--STGPTRTLVLSYVPGDVSETIVRRDLE----VFGEVRGVQMER 116
Q +H ++ P P S P+ TL + + + T+++R LE +G+V VQ +
Sbjct: 4 QTNSHQEVQQPSPKETDSQTPSETLYIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARK 63
Query: 117 L--MEGIVTVHFYDLRHAEMAFKEIREQHMQLQQQSYGLKNPYSSGLMLMNNDNNNN--- 171
M G V F +L +A A K++ Q Y L Y +M+ + + ++
Sbjct: 64 TLRMRGQAFVVFDNLENASRALKDL---------QGYPL---YGKPMMIQYSKSKSDIIV 111
Query: 172 ------NLATGCYDNQVVAESLMIMNSYAPVLPPPA-RGLVAGRPVWAQFIVPTCNAVPD 224
+ T D + E L ++ P P P + V R V A+ +
Sbjct: 112 QRESPEEIETRKKDRKNRREMLKRTSALQPAAPKPTHKKPVPKRNVGAERKSTINEDLLP 171
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
N +++ N+ V++ L +IF+AF +E+R P ++ F+E+ R+A A
Sbjct: 172 PNK--VLLLQNIPQEVNADVLTQIFEAFSGFQEVRMVPGRRGIAFVEYDSDREATVAKNG 229
Query: 285 MNGQEIYGKHVVIEFSR 301
G + G + + F+R
Sbjct: 230 TTGMSLSGNQIKVTFAR 246
>sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila melanogaster GN=B52 PE=1
SV=4
Length = 376
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L GV L+ F+ +G +++ +K F+EF D RDA A+ E+NG+E+
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDI---LIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 291 YGKHVVIEFSR 301
G+ VV+E +R
Sbjct: 63 LGERVVVEPAR 73
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S VS LK+ + G V ++++ +EF + D A+++++ E+
Sbjct: 122 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 181
Query: 291 YGKHV 295
G+ +
Sbjct: 182 NGRRI 186
>sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6
PE=1 SV=2
Length = 344
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L E LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V + ++ IEF D +AL +++G EI
Sbjct: 112 LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEI 171
Query: 291 YGKHVVIEFSRP 302
G+++ + +P
Sbjct: 172 NGRNIRLIEDKP 183
>sp|Q8VYA5|RSZ33_ARATH Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana
GN=RS2Z33 PE=1 SV=1
Length = 290
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V L S + L+ +F +G V R+ +K+ F+EF D RDA A ++G++
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRV---RDVDMKRDYAFVEFGDPRDADDARHYLDGRDF 69
Query: 291 YGKHVVIEFSR 301
G + +EFSR
Sbjct: 70 DGSRITVEFSR 80
>sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, family 1 member B OS=Mus
musculus GN=Rbmy1b PE=2 SV=3
Length = 380
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 229 GTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALK 283
G I + L+ TL+EIF FGPV + RET + F+ F DA A+K
Sbjct: 8 GKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVK 67
Query: 284 EMNGQEIYGKHVVIEFSR 301
EMNG + GK + ++ +R
Sbjct: 68 EMNGVILDGKRIKVKQAR 85
>sp|Q9BRL6|SRSF8_HUMAN Serine/arginine-rich splicing factor 8 OS=Homo sapiens GN=SRSF8
PE=1 SV=1
Length = 282
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR------FIEFYDVR 276
PD + T+ V NL S +L+ +F+ +G V ++ P + H + F+ F+D R
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDV-YIPREPHTKAPRGFAFVRFHDRR 66
Query: 277 DAAKALKEMNGQEIYGKHVVIEFSRPG 303
DA A M+G E+ G+ + ++ +R G
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>sp|Q8BL97|SRSF7_MOUSE Serine/arginine-rich splicing factor 7 OS=Mus musculus GN=Srsf7
PE=1 SV=1
Length = 267
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 225 GNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKE 284
G+++ + V NL +G L+ F +GP++ + F+EF D RDA A++
Sbjct: 36 GDSETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 95
Query: 285 MNGQEIYGKHVVIEFS 300
++G+ I G V +E S
Sbjct: 96 LDGKVICGSRVRVELS 111
>sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens
GN=SYNCRIP PE=1 SV=2
Length = 623
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 339 VLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 395
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 396 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>sp|Q7TP47|HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus
GN=Syncrip PE=2 SV=1
Length = 533
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQE 289
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG++
Sbjct: 249 VLFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKD 305
Query: 290 IYGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
+ G+++ I F++P +K A + + +
Sbjct: 306 LEGENIEIVFAKPPDQKRKERKAQRQAAKNQM 337
>sp|Q06A98|SRSF2_PIG Serine/arginine-rich splicing factor 2 OS=Sus scrofa GN=SRSF2 PE=2
SV=1
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2
PE=2 SV=1
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q6PDU1|SRSF2_RAT Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus
GN=Srsf2 PE=1 SV=3
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q62093|SRSF2_MOUSE Serine/arginine-rich splicing factor 2 OS=Mus musculus GN=Srsf2
PE=1 SV=4
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2
PE=1 SV=4
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2 OS=Bos taurus GN=SRSF2 PE=2
SV=3
Length = 221
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q5R1W5|SRSF2_PANTR Serine/arginine-rich splicing factor 2 OS=Pan troglodytes GN=SRSF2
PE=2 SV=3
Length = 221
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 223 PDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRD 277
PD ++ V NL S TL+ +F+ +G V ++ R T + F+ F+D RD
Sbjct: 8 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 67
Query: 278 AAKALKEMNGQEIYGKHVVIEFSRPG 303
A A+ M+G + G+ + ++ +R G
Sbjct: 68 AEDAMDAMDGAVLDGRELRVQMARYG 93
>sp|Q7TMK9|HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus
GN=Syncrip PE=1 SV=2
Length = 623
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + V+ L++ F FG ++ +++ K FI F + A KA++EMNG+++
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNGKDL 396
Query: 291 YGKHVVIEFSRPGGHSKKFFYANSSSCASSL 321
G+++ I F++P +K A + + +
Sbjct: 397 EGENIEIVFAKPPDQKRKERKAQRQAAKNQM 427
>sp|Q8VE97|SRSF4_MOUSE Serine/arginine-rich splicing factor 4 OS=Mus musculus GN=Srsf4
PE=2 SV=1
Length = 489
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRPG 303
G+ + + +PG
Sbjct: 166 NGRKIRLVEDKPG 178
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 227 NQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMN 286
N T+ V LD+ V+ LK +F +G + ++ P K F++F + A +AL+ +N
Sbjct: 259 NNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLN 317
Query: 287 GQEIYGKHVVIEFSRP-----GGHSKKFFYANSSSCASSLNYS 324
G ++ G V + + R G +F+Y Y+
Sbjct: 318 GVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYT 360
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PUB1 PE=1 SV=4
Length = 453
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 215 IVPTCNAVPDGNNQGTIVVF--NLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQR---- 268
+VP NA+ G V++ NLD ++ LK+ FQ GP+ ++ K ++
Sbjct: 60 VVP-ANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYA 118
Query: 269 FIEFYDVRDAAKALKEMNGQEIYGKHVVIEFS 300
F+E++ DA AL+ +NG++I V I ++
Sbjct: 119 FVEYHQSHDANIALQTLNGKQIENNIVKINWA 150
>sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4
PE=1 SV=2
Length = 494
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 245 LKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSR 301
++ F+ +G + E+ LK F+EF D+RDA A+ E+NG+++ G+ V++E +R
Sbjct: 18 VERFFKGYGKILEV---DLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V +K++ IEF D +AL++++G E+
Sbjct: 106 LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEV 165
Query: 291 YGKHVVIEFSRP 302
G+ + + +P
Sbjct: 166 NGRKIRLVEDKP 177
>sp|Q3B7L6|SRSF6_BOVIN Serine/arginine-rich splicing factor 6 OS=Bos taurus GN=SRSF6 PE=2
SV=1
Length = 345
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L V ++ F +G L LK F+EF D RDA A+ E+NG+E+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYG---RLLGIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++E +R
Sbjct: 61 CGERVIVEHAR 71
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
++V NL S S LK+ + G V + ++ IEF D +AL +++G EI
Sbjct: 112 LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEI 171
Query: 291 YGKHVVIEFSRP 302
G+++ + +P
Sbjct: 172 NGRNIRLIEDKP 183
>sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana
GN=RNU1 PE=1 SV=1
Length = 427
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 230 TIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKE 284
T+ V L+ S S +K F+++GP+K + + T K FIE+ RD A K+
Sbjct: 139 TLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQ 198
Query: 285 MNGQEIYGKHVVIEFSR 301
+GQ+I G+ V+++ R
Sbjct: 199 ADGQKIDGRRVLVDVER 215
>sp|Q10277|MSA1_SCHPO Multicopy suppressor of sporulation protein msa1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=msa1 PE=4 SV=1
Length = 533
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 225 GNNQGTIVVFNLDSGVS----SSTLKEIFQAFGP---VKELRETPLKKHQRFIEFYDVRD 277
G + V +L+S S ++T+K+ FQ +GP VK L++ L++ F++F + D
Sbjct: 75 GKPVACLFVASLNSSRSEEELTATVKDYFQQWGPLLHVKVLKDW-LQRPYSFVQFQNTDD 133
Query: 278 AAKALKEMNGQEIYGKHVVIEFSR 301
A+KAL E + G+H+ IE ++
Sbjct: 134 ASKALSEAQNTILDGRHIRIERAK 157
>sp|O01671|SXL_MEGSC Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3
Length = 321
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 215 IVPTCNAVPDG-NNQGTIVVFN-LDSGVSSSTLKEIFQAFGPVKELR-----ETPLKKHQ 267
+ + N++ G NN GT ++ N L + L +F+ GP+ R +T
Sbjct: 62 MANSTNSLNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGY 121
Query: 268 RFIEFYDVRDAAKALKEMNGQEIYGKHVVIEFSRPGG 304
F++F DA +A+ +NG + K + + F+RPGG
Sbjct: 122 GFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGG 158
>sp|P84104|SRSF3_MOUSE Serine/arginine-rich splicing factor 3 OS=Mus musculus GN=Srsf3
PE=1 SV=1
Length = 164
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + + + L+ F +GP++ + F+EF D RDAA A++E++G+ +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTL 71
Query: 291 YGKHVVIEFS 300
G V +E S
Sbjct: 72 CGCRVRVELS 81
>sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3
PE=1 SV=1
Length = 164
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + + + L+ F +GP++ + F+EF D RDAA A++E++G+ +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTL 71
Query: 291 YGKHVVIEFS 300
G V +E S
Sbjct: 72 CGCRVRVELS 81
>sp|Q3SZR8|SRSF3_BOVIN Serine/arginine-rich splicing factor 3 OS=Bos taurus GN=SRSF3 PE=2
SV=1
Length = 164
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ V NL + + + L+ F +GP++ + F+EF D RDAA A++E++G+ +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTL 71
Query: 291 YGKHVVIEFS 300
G V +E S
Sbjct: 72 CGCRVRVELS 81
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2
Length = 636
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + N + LKE+F FGP ++ E+ K F+ F DA KA+ EMN
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 287 GQEIYGKHVVI 297
G+E+ GK + +
Sbjct: 253 GKELNGKQIYV 263
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPV---KELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
+ V NLD G+ L++ F FG + K + E K F+ F +A KA+ EMNG
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 288 QEIYGKHVVIEFSR 301
+ + K + + ++
Sbjct: 356 RIVATKPLYVALAQ 369
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 204 LVAGRPV---WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV---KE 257
++ G+PV W+Q P+ GN I + NLD + + L + F AFG + K
Sbjct: 76 VIKGKPVRIMWSQRD-PSLRKSGVGN----IFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVI 297
+ + K F+ F A +A+++MNG + + V +
Sbjct: 131 VCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2
SV=1
Length = 636
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELR----ETPLKKHQRFIEFYDVRDAAKALKEMN 286
+ + N + LKE+F FGP ++ E+ K F+ F DA KA+ EMN
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 287 GQEIYGKHVVI 297
G+E+ GK + +
Sbjct: 253 GKELNGKQIYV 263
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPV---KELRETPLKKHQRFIEFYDVRDAAKALKEMNG 287
+ V NLD G+ L++ F FG + K + E K F+ F +A KA+ EMNG
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 288 QEIYGKHVVIEFSR 301
+ + K + + ++
Sbjct: 356 RIVATKPLYVALAQ 369
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 204 LVAGRPV---WAQFIVPTCNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPV---KE 257
++ G+PV W+Q P+ GN I + NLD + + L + F AFG + K
Sbjct: 76 VIKGKPVRIMWSQRD-PSLRKSGVGN----IFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 258 LRETPLKKHQRFIEFYDVRDAAKALKEMNGQEIYGKHVVI 297
+ + K F+ F A +A+++MNG + + V +
Sbjct: 131 VCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
>sp|A7EWN6|EIF3G_SCLS1 Eukaryotic translation initiation factor 3 subunit G OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif35
PE=3 SV=1
Length = 288
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
++ T+ V N+ L+++F+ FG V + RET L K FI F + DAAK
Sbjct: 205 DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAK 264
Query: 281 ALKEMNGQEIYG-KHVV--IEFSRP 302
A ++M+G YG KH++ +EF++
Sbjct: 265 ACEKMDG---YGFKHLILRVEFAKK 286
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 219 CNAVPDGNNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDA 278
NA + N TI V LD+ V+ LK IF FG + ++ P K+ F+++ + A
Sbjct: 250 ANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC-GFVQYANKASA 308
Query: 279 AKALKEMNGQEIYGKHVVIEFSR 301
AL +NG ++ G+ + + + R
Sbjct: 309 EHALSVLNGTQLGGQSIRLSWGR 331
>sp|Q23120|RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 OS=Caenorhabditis
elegans GN=rsp-2 PE=3 SV=1
Length = 281
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKELRETPLKKHQRFIEFYDVRDAAKALKEMNGQEI 290
+ + L + S ++ F+ +G +L + +K F++F D RDA A+ ++NG+E+
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYG---KLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKEL 60
Query: 291 YGKHVVIEFSR 301
G+ V++EF R
Sbjct: 61 CGERVILEFPR 71
>sp|A6SGN8|EIF3G_BOTFB Eukaryotic translation initiation factor 3 subunit G OS=Botryotinia
fuckeliana (strain B05.10) GN=tif35 PE=3 SV=1
Length = 288
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 226 NNQGTIVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAK 280
++ T+ V N+ L+++F+ FG V + RET L K FI F + DAAK
Sbjct: 205 DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAK 264
Query: 281 ALKEMNGQEIYG-KHVV--IEFSRP 302
A ++M+G YG KH++ +EF++
Sbjct: 265 ACEKMDG---YGFKHLILRVEFAKK 286
>sp|Q9LIS2|RBG4_ARATH Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis
thaliana GN=RBG4 PE=2 SV=1
Length = 136
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 231 IVVFNLDSGVSSSTLKEIFQAFGPVKEL-----RETPLKKHQRFIEFYDVRDAAKALKEM 285
+ V L G S+LK+ F +FG V E RET + F+ F A A+KEM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 286 NGQEIYGKHVVIEFS 300
+G+E+ G+ + + +
Sbjct: 97 DGKELNGRQIRVNLA 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,536,048
Number of Sequences: 539616
Number of extensions: 7686783
Number of successful extensions: 55770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 53921
Number of HSP's gapped (non-prelim): 2241
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)