BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046225
MKVRVYTASEVESELEVAKREYLQAAVGISSEKLAIPKLLDWYLLDFAKDFESLLDWICL
QSVVVTVLYSARE

High Scoring Gene Products

Symbol, full name Information P value
AT4G37080 protein from Arabidopsis thaliana 1.8e-19
AT5G42690 protein from Arabidopsis thaliana 1.3e-18
AT2G39690 protein from Arabidopsis thaliana 7.3e-12
AT3G12540 protein from Arabidopsis thaliana 1.4e-09
AT3G13000 protein from Arabidopsis thaliana 3.5e-05
AT5G47380 protein from Arabidopsis thaliana 0.00010
AT1G16750 protein from Arabidopsis thaliana 0.00010
AT1G76620 protein from Arabidopsis thaliana 0.00059
AT2G23700 protein from Arabidopsis thaliana 0.00067

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046225
        (73 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115164 - symbol:AT4G37080 "AT4G37080" species...   241  1.8e-19   1
TAIR|locus:2165487 - symbol:AT5G42690 species:3702 "Arabi...   232  1.3e-18   1
TAIR|locus:2043235 - symbol:AT2G39690 "AT2G39690" species...   169  7.3e-12   1
TAIR|locus:2101242 - symbol:AT3G12540 species:3702 "Arabi...   148  1.4e-09   1
TAIR|locus:2089220 - symbol:AT3G13000 species:3702 "Arabi...   108  3.5e-05   1
TAIR|locus:2171499 - symbol:AT5G47380 "AT5G47380" species...   104  0.00010   1
TAIR|locus:2015666 - symbol:AT1G16750 "AT1G16750" species...   103  0.00010   1
TAIR|locus:2011661 - symbol:AT1G76620 "AT1G76620" species...    96  0.00059   1
TAIR|locus:2049008 - symbol:AT2G23700 "AT2G23700" species...    97  0.00067   1


>TAIR|locus:2115164 [details] [associations]
            symbol:AT4G37080 "AT4G37080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 IPI:IPI00540279
            RefSeq:NP_001190943.1 RefSeq:NP_974698.1 UniGene:At.31280
            ProteinModelPortal:F4JR96 EnsemblPlants:AT4G37080.2
            EnsemblPlants:AT4G37080.3 GeneID:829862 KEGG:ath:AT4G37080
            OMA:PYHLKFT PhylomeDB:F4JR96 Uniprot:F4JR96
        Length = 610

 Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 46/60 (76%), Positives = 53/60 (88%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGIS-SEKLAIPKLLDWYLLDFAKDFESLLDWICLQ 61
             VRVYTA+ VE ELE AKR+YLQA+VGIS + KL +PK+LDWYLLDFAKD ESLLDW+CLQ
Sbjct:   511 VRVYTAANVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQ 570


>TAIR|locus:2165487 [details] [associations]
            symbol:AT5G42690 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 EMBL:DQ132740 IPI:IPI00534531
            RefSeq:NP_001078694.1 UniGene:At.55322 PRIDE:Q45GG2
            EnsemblPlants:AT5G42690.2 GeneID:834278 KEGG:ath:AT5G42690
            TAIR:At5g42690 HOGENOM:HOG000237496 OMA:ERAFNRP PhylomeDB:Q45GG2
            ProtClustDB:CLSN2699120 Genevestigator:Q45GG2 Uniprot:Q45GG2
        Length = 540

 Score = 232 (86.7 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSEKLAIPKLLDWYLLDFAKDFESLLDWICLQ 61
             VRVYTAS+VE ELEVAKREYL+A+VGIS  K+ IPKL+DWY  DFAKD ESLLDWI LQ
Sbjct:   441 VRVYTASKVEEELEVAKREYLEASVGISVVKIGIPKLMDWYSHDFAKDIESLLDWIFLQ 499


>TAIR|locus:2043235 [details] [associations]
            symbol:AT2G39690 "AT2G39690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 IPI:IPI00546810 RefSeq:NP_181499.2
            UniGene:At.50124 UniGene:At.68803 PRIDE:F4IVY7
            EnsemblPlants:AT2G39690.1 GeneID:818552 KEGG:ath:AT2G39690
            OMA:PYKNFIH Uniprot:F4IVY7
        Length = 498

 Score = 169 (64.5 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 33/60 (55%), Positives = 47/60 (78%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSEK-LAIPKLLDWYLLDFAKDFESLLDWICLQ 61
             +RVYTA EV ++L  A+ EYL+A+VG+SS+K + +P+LL W++ DFA D ESLL+WI  Q
Sbjct:   397 LRVYTADEVVNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQ 456


>TAIR|locus:2101242 [details] [associations]
            symbol:AT3G12540 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0048765 "root hair cell
            differentiation" evidence=RCA] EMBL:CP002686 InterPro:IPR006869
            Pfam:PF04784 InterPro:IPR025757 Pfam:PF14389 IPI:IPI00528970
            RefSeq:NP_187860.3 UniGene:At.50177 PRIDE:F4J9T1
            EnsemblPlants:AT3G12540.1 GeneID:820433 KEGG:ath:AT3G12540
            OMA:VEDEIFY ArrayExpress:F4J9T1 Uniprot:F4J9T1
        Length = 505

 Score = 148 (57.2 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/60 (50%), Positives = 44/60 (73%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISS-EKLAIPKLLDWYLLDFAKDFESLLDWICLQ 61
             +RVYTA +V +EL  A+ EYL+A++G+S  +K+ IP+ L   L DFA+D  SL++WIC Q
Sbjct:   401 LRVYTAEDVVNELIKARTEYLEASIGVSGRKKIVIPRFLHKRLRDFAEDEGSLIEWICSQ 460


>TAIR|locus:2089220 [details] [associations]
            symbol:AT3G13000 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0005773 "vacuole" evidence=IDA] GO:GO:0005773
            EMBL:CP002686 GO:GO:0003700 InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 EMBL:AK222168 EMBL:AK317501
            IPI:IPI00546031 RefSeq:NP_974297.1 UniGene:At.27720 PRIDE:Q56W79
            EnsemblPlants:AT3G13000.2 GeneID:820486 KEGG:ath:AT3G13000
            TAIR:At3g13000 eggNOG:NOG281648 HOGENOM:HOG000242056
            InParanoid:Q56W79 OMA:NYSISAF PhylomeDB:Q56W79
            ProtClustDB:CLSN2690538 Genevestigator:Q56W79 Uniprot:Q56W79
        Length = 582

 Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSE-KLAIPKLLDWYLLDFAKDFESLLDWI 58
             VR+Y+A  V+ E+  A+R+++QA+VG+SS+ KL +PK+L  Y     +D  +L  WI
Sbjct:   477 VRIYSAKGVKEEMLEAQRDFIQASVGLSSKGKLLLPKMLHCYAKSLVED-SNLGVWI 532


>TAIR|locus:2171499 [details] [associations]
            symbol:AT5G47380 "AT5G47380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 IPI:IPI00545901 RefSeq:NP_199549.2
            UniGene:At.29896 EnsemblPlants:AT5G47380.1 GeneID:834785
            KEGG:ath:AT5G47380 OMA:STAMRKK ArrayExpress:F4JX46 Uniprot:F4JX46
        Length = 618

 Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
 Identities = 19/57 (33%), Positives = 38/57 (66%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSEK-LAIPKLLDWYLLDFAKDFESLLDWI 58
             ++ YTAS V+ EL+ +KRE+L A V +  +K + +PK+++ +  + +  F+ L+ W+
Sbjct:   488 LKAYTASNVKEELDASKREFLGANVVVKMQKKVLLPKIIERFTKEASLSFDDLMRWL 544


>TAIR|locus:2015666 [details] [associations]
            symbol:AT1G16750 "AT1G16750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR006869 Pfam:PF04784 InterPro:IPR025757 Pfam:PF14389
            HOGENOM:HOG000242056 EMBL:AY126989 EMBL:BT001073 IPI:IPI00535709
            RefSeq:NP_564005.2 UniGene:At.16104 UniGene:At.60435 PaxDb:Q8L7U6
            PRIDE:Q8L7U6 EnsemblPlants:AT1G16750.1 GeneID:838246
            KEGG:ath:AT1G16750 TAIR:At1g16750 eggNOG:NOG315740
            InParanoid:Q8L7U6 OMA:QERNERK PhylomeDB:Q8L7U6
            ProtClustDB:CLSN2918142 Genevestigator:Q8L7U6 Uniprot:Q8L7U6
        Length = 529

 Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
 Identities = 23/57 (40%), Positives = 36/57 (63%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSE-KLAIPKLLDWYLLDFAKDFESLLDWI 58
             VR+Y+A  V  ELE A+++Y+QA+VG+S   KL +P++L  +      D +  L WI
Sbjct:   427 VRIYSAENVGEELEEAQKDYIQASVGVSPRGKLIVPQMLHCFAKKSVDDCKVAL-WI 482


>TAIR|locus:2011661 [details] [associations]
            symbol:AT1G76620 "AT1G76620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR006869 Pfam:PF04784
            InterPro:IPR025757 Pfam:PF14389 HOGENOM:HOG000242902 EMBL:AY060575
            EMBL:AY149945 EMBL:AK227157 IPI:IPI00542217 RefSeq:NP_565137.1
            UniGene:At.19674 PRIDE:Q8W4R7 EnsemblPlants:AT1G76620.1
            GeneID:843995 KEGG:ath:AT1G76620 TAIR:At1g76620 eggNOG:NOG265018
            InParanoid:Q8W4R7 OMA:MAHEEQL PhylomeDB:Q8W4R7
            ProtClustDB:CLSN2917032 Genevestigator:Q8W4R7 Uniprot:Q8W4R7
        Length = 527

 Score = 96 (38.9 bits), Expect = 0.00059, P = 0.00059
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGI-SSEKLAIPKLLDWYLLDFAKDFESLLD 56
             VRVYTA  +  +L  AK+EY+++ V +    K+ +PK+   Y+ D + D   L++
Sbjct:   423 VRVYTADRIFRDLRQAKQEYIRSNVRVYKGTKILLPKIFQHYVKDMSMDVSKLME 477


>TAIR|locus:2049008 [details] [associations]
            symbol:AT2G23700 "AT2G23700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482
            InterPro:IPR006869 Pfam:PF04784 InterPro:IPR025757 Pfam:PF14389
            IPI:IPI00543233 PIR:T02421 RefSeq:NP_179950.1 UniGene:At.39258
            PRIDE:O64832 EnsemblPlants:AT2G23700.1 GeneID:816901
            KEGG:ath:AT2G23700 TAIR:At2g23700 eggNOG:NOG299370
            HOGENOM:HOG000242902 InParanoid:O64832 OMA:DNRVKEP PhylomeDB:O64832
            ProtClustDB:CLSN2912868 Genevestigator:O64832 Uniprot:O64832
        Length = 707

 Score = 97 (39.2 bits), Expect = 0.00067, P = 0.00067
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query:     3 VRVYTASEVESELEVAKREYLQAAVGISSE-KLAIPKLLDWYLLDFAKDFESLLDWI--C 59
             +RV+T   +  ELE AK EY++A  G+  + KL +PK+++ +  D      +L++ I  C
Sbjct:   607 IRVFTPKGIYQELETAKEEYIRATFGVKKDQKLVLPKIIESFSKDSGLGQAALMEMIQEC 666

Query:    60 L 60
             L
Sbjct:   667 L 667


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        73   0.00091  102 3  11 22  0.47    28
                                                     29  0.45    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  431 (46 KB)
  Total size of DFA:  81 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.35u 0.17s 8.52t   Elapsed:  00:00:00
  Total cpu time:  8.35u 0.17s 8.52t   Elapsed:  00:00:00
  Start:  Sat May 11 02:17:16 2013   End:  Sat May 11 02:17:16 2013

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