BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046225
         (73 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8PT81|ENO_METMA Enolase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 /
           Goe1 / Go1 / JCM 11833 / OCM 88) GN=eno PE=3 SV=1
          Length = 428

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 6   YTASEVESELEVAKRE-YLQAAVGISSEKLAIPKLLDWYL 44
           YT SEV   L+ A  E Y +    I  +KLA P+LLD+Y+
Sbjct: 243 YTESEVTIGLDAAATEFYEEEFYNIDGKKLAAPELLDYYV 282


>sp|Q8TQ79|ENO_METAC Enolase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834
           / JCM 12185 / C2A) GN=eno PE=3 SV=1
          Length = 429

 Score = 31.2 bits (69), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 6   YTASEVESELEVAKRE-YLQAAVGISSEKLAIPKLLDWYL 44
           YT SEV   L+ A  E Y +    I  +KLA P+LLD+Y+
Sbjct: 244 YTESEVTIGLDAAATEFYEEEFYNIDGKKLAAPELLDYYV 283


>sp|Q468E2|ENO_METBF Enolase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eno
           PE=3 SV=1
          Length = 428

 Score = 30.4 bits (67), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 6   YTASEVESELEVAKREYLQ-AAVGISSEKLAIPKLLDWYL 44
           YT +EV   L+ A  E+ +  A  I  +KL+ P+L+D+Y+
Sbjct: 243 YTDTEVTIGLDAAASEFYEDEAYAIDGKKLSAPELMDYYV 282


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,960,065
Number of Sequences: 539616
Number of extensions: 640980
Number of successful extensions: 1856
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1856
Number of HSP's gapped (non-prelim): 3
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)