Your job contains 1 sequence.
>046226
MSSLDSPNPSFAIRETTPTGTAPSTFLRSISTKEPSFSTFPYSPPRFSSPISLHTSPLSS
PRHPFNPTAAAGSSSPETSSSYRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQP
EFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV
RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN
ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYG
GCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG
RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHL
NKTNGHEYFELQEG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046226
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 556 8.9e-54 1
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 530 5.1e-51 1
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 514 2.5e-49 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 511 5.2e-49 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 509 8.5e-49 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 478 1.6e-45 1
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 426 5.3e-40 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 383 1.9e-35 1
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 343 3.3e-31 1
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 328 1.3e-29 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 140 4.6e-12 3
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 193 4.7e-12 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 140 4.2e-11 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 143 4.7e-11 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 140 6.0e-11 2
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 137 7.4e-11 3
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 157 1.4e-10 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 159 1.7e-10 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 159 1.7e-10 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 157 1.7e-10 2
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 157 1.7e-10 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 178 2.4e-10 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 141 2.7e-10 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 162 2.8e-10 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 144 3.6e-10 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 141 3.8e-10 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 140 3.9e-10 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 144 4.6e-10 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 138 8.3e-10 2
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 130 8.9e-10 2
DICTYBASE|DDB_G0277143 - symbol:gpbA "G protein b" specie... 121 1.2e-09 3
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 144 1.8e-09 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 150 3.2e-09 2
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 144 3.8e-09 2
WB|WBGene00001679 - symbol:gpb-1 species:6239 "Caenorhabd... 117 4.1e-09 3
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 144 4.6e-09 2
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 144 4.9e-09 2
TAIR|locus:2155904 - symbol:AT5G49200 species:3702 "Arabi... 146 5.8e-09 2
TAIR|locus:2173103 - symbol:AT5G51980 species:3702 "Arabi... 131 6.1e-09 2
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 144 7.3e-09 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 113 8.6e-09 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 152 9.5e-09 2
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 144 1.1e-08 2
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 144 1.1e-08 2
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 147 1.1e-08 2
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 143 1.1e-08 2
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 144 1.2e-08 2
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 144 1.2e-08 2
TAIR|locus:4515102561 - symbol:AT1G21651 species:3702 "Ar... 163 1.2e-08 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 144 1.3e-08 2
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 144 1.3e-08 2
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 125 1.3e-08 3
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 155 1.9e-08 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 154 2.2e-08 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 118 2.3e-08 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 159 2.4e-08 3
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 127 2.7e-08 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 127 2.7e-08 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 127 2.7e-08 2
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 143 2.8e-08 2
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 125 3.0e-08 3
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 125 3.0e-08 3
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 125 3.0e-08 3
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 125 3.0e-08 3
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 125 3.0e-08 3
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 143 3.4e-08 2
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 142 3.4e-08 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 121 3.4e-08 2
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 140 3.4e-08 2
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 139 3.4e-08 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 155 3.5e-08 1
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 125 3.5e-08 2
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 126 3.6e-08 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 152 3.6e-08 2
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 140 3.6e-08 2
TAIR|locus:2028481 - symbol:SCD1 "STOMATAL CYTOKINESIS-DE... 131 4.0e-08 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 118 4.1e-08 2
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 117 4.1e-08 3
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 140 4.1e-08 2
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 140 4.3e-08 2
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 139 5.6e-08 2
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 139 5.6e-08 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 135 5.9e-08 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 136 6.7e-08 2
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 130 6.8e-08 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 118 7.3e-08 3
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 123 7.6e-08 2
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 112 7.9e-08 2
FB|FBgn0001105 - symbol:Gbeta13F "G protein beta-subunit ... 109 8.7e-08 3
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 137 9.0e-08 2
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 116 9.0e-08 2
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 134 9.7e-08 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 132 9.8e-08 3
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 118 1.1e-07 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 139 1.1e-07 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 149 1.1e-07 1
DICTYBASE|DDB_G0282489 - symbol:mhkD "putative myosin hea... 145 1.4e-07 3
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 132 1.5e-07 3
POMBASE|SPCC126.01c - symbol:SPCC126.01c "conserved funga... 148 1.5e-07 1
TAIR|locus:2131799 - symbol:ZFWD1 "zinc finger WD40 repea... 118 1.6e-07 2
WARNING: Descriptions of 336 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 122/338 (36%), Positives = 183/338 (54%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDR 144
I S+++++G I +A +YTGSDS IR+WK E K + +V A+ +S ++
Sbjct: 89 IGSLVREEGHIYSLAATKDLLYTGSDSKNIRVWKN--LKEFSAFKCNSGLVKAIVISGEK 146
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHVKLATIP------KTGGAVRNLI-VGKDKM---MKHM 194
++ + DGKIRVW+ + N H + T+P K RN + V K + +KH
Sbjct: 147 IFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHA 206
Query: 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSAS 254
++ +++N LYSAS D+TIKVWRI DSKC+E+I AH + +N++V + +++S S
Sbjct: 207 DAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGS 266
Query: 255 DDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGW 314
D TV+ W+R + HTL+ TLT + S V +++W +
Sbjct: 267 ADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWER-- 324
Query: 315 FSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGR-HTMLAVLVGHRG 373
QL YGG L+GH AV+CL + V SGSAD T VW R DG HT L+VL GH G
Sbjct: 325 -EKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKR--DGNIHTCLSVLTGHTG 381
Query: 374 PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411
P++C R E D+ + +GSLD +K+W V+
Sbjct: 382 PVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 85 ISSVLKKDGQILCIAVG-NGF-IYTGSDSNVIRIW-KQPEFTECGRLKAKTSMVVAMEVS 141
+ ++ K++ + +AV NG +Y GS ++ W ++ + G LK V+ +EV+
Sbjct: 288 MQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVA 347
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIA 201
V++ D I VW+ D + H L+ + G V+ L V D+ I
Sbjct: 348 GSLVFSGSADKTICVWKR--DGNI-HTCLSVLTGHTGPVKCLAVEADREASERRDKKWI- 403
Query: 202 INVSDDTLYSASLDKTIKVWRIRDS 226
+YS SLDK++KVW + +S
Sbjct: 404 -------VYSGSLDKSVKVWGVSES 421
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 131/419 (31%), Positives = 203/419 (48%)
Query: 10 SFAIRETTPTGTAPSTFLRSISTKEPSFSTFPYSPPRFSSPISLHTSP--LSSPRHPFNX 67
S A + T T P + I+ + S S S P SP S+ P + SP H
Sbjct: 15 SQAFTKLTKVETIPDPDIYDITYVDISPSEGS-SSPLSKSPWSVQVDPSAVDSPYHSVKV 73
Query: 68 XXXXXXXXXXXXXXYRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR 127
+ S+++++G I +A +YTGSDS IR+WK E
Sbjct: 74 TTDTTKEKSTNHSPNILLGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKN--HVEFSS 131
Query: 128 LKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGK 187
K+ + +V A+ ++ D+++ + DGKIRVW++ H ++ T+P +RN IV
Sbjct: 132 FKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHRRVGTMPNLLDYIRNSIVPS 191
Query: 188 DKM-------------MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA 234
+H+ I+ +A++ LYS S DKT KVWR+ D +C+E++ A
Sbjct: 192 SYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNA 251
Query: 235 HSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXX 294
H + +NA+V DG++++ S D TV+VWRR +++ H TL + V
Sbjct: 252 HEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQS 311
Query: 295 XXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+++W + ++ GG L+GH AV+CL + N + SGSAD RVW
Sbjct: 312 ATLVYCGSSDGTVNFWER---ENNMKNGGVLKGHKLAVLCLVAAGNLMFSGSADLGIRVW 368
Query: 355 AR-EQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTIC-TGSLDGVLKMWRVT 411
R E G H L+VL GH GP++C +A + R E E I +GSLD +KMWRV+
Sbjct: 369 RRPEGGGEHVCLSVLTGHAGPVKC-LA-VERDQESVSGERRWIVYSGSLDRSVKMWRVS 425
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 87 SVLKKDGQILCIAVGNG--FIYTGSDSNVIRIW-KQPEFTECGRLKAKTSMVVAMEVSHD 143
++LK+D + IAV +Y GS + W ++ G LK V+ + + +
Sbjct: 295 TLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGN 354
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203
+++ D IRVWR + G +HV L+ + G V+ L V +D+ S++
Sbjct: 355 LMFSGSADLGIRVWRRP-EGGGEHVCLSVLTGHAGPVKCLAVERDQ--------ESVS-G 404
Query: 204 VSDDTLYSASLDKTIKVWRIRDS 226
+YS SLD+++K+WR+ +S
Sbjct: 405 ERRWIVYSGSLDRSVKMWRVSES 427
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 117/345 (33%), Positives = 181/345 (52%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDR 144
I S+++K+G I +A +YTGSDS IR+WK E K+ + ++ A+ + DR
Sbjct: 118 IGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKN--LKEHAGFKSSSGLIKAIVIFGDR 175
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM----------MKHM 194
++ + DGKIR+W+ + KH ++ T+P V++ + K M KH
Sbjct: 176 IFTGHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHN 235
Query: 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSAS 254
++S++++V LYS+S D TIKVWRI DSKC+E+I AH + IN+++ D ++++ S
Sbjct: 236 DAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGS 295
Query: 255 DDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGW 314
D TV+VW+R + HTL L + + V ++YW +
Sbjct: 296 ADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWER-- 353
Query: 315 FSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWARE-QDGRHTMLAVLVGHRG 373
S + GG L+GH AV+CL N ++SGSAD VW R+ D H L+VL GH G
Sbjct: 354 -SKRSFTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMG 412
Query: 374 PIRC-AI-----AFLGRFGEETE-DEYCTICTGSLDGVLKMWRVT 411
P++C A+ G E D I +GSLD +K+WRV+
Sbjct: 413 PVKCLAVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVS 457
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/155 (28%), Positives = 78/155 (50%)
Query: 88 VLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPE--FTECGRLKAKTSMVVAMEVSHD 143
+LK++ + +AV + +Y GS ++ W++ + FT G LK S V+ + ++ +
Sbjct: 320 LLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTG-GILKGHKSAVLCLGIAGN 378
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203
+ + D I VWR + H L+ + G V+ L V +++ H G S+A
Sbjct: 379 LLLSGSADKNICVWRRD-PSDKSHQCLSVLTGHMGPVKCLAVEEERAC-HQGAKASVAEG 436
Query: 204 VSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP 238
+YS SLDK++KVWR+ S+ + T + EP
Sbjct: 437 DRKWIIYSGSLDKSVKVWRV--SERMATWKEMDEP 469
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 111/346 (32%), Positives = 185/346 (53%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD- 143
I +V++++G + +A ++TGSDS IR+WK + + K+ + V A+ V+ D
Sbjct: 127 IGTVVRQEGHVYSLAASGDLLFTGSDSKNIRVWK--DLKDFSGFKSTSGFVKAIVVTRDN 184
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV------RNLI-VGKDK---MMKH 193
RV+ + DGKIRVWR + N K+ ++ ++P + RN + V + K ++H
Sbjct: 185 RVFTGHQDGKIRVWRGSKKNPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRH 244
Query: 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSA 253
++ +++N LYS S DKT+KVWR+ DSKC+E+I+AH + +N +V D ++++
Sbjct: 245 FDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFTG 304
Query: 254 SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKG 313
S D T++VW+R + H L+ L + + V +++W +
Sbjct: 305 SADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQ 364
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373
+ L + G + GH AV+CLA+ + ++SG AD VW R DG HT L+VL+ H G
Sbjct: 365 KY---LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEG 421
Query: 374 PIRCAIAFL--------GRFGEETEDEYCTICTGSLDGVLKMWRVT 411
P++C A G G E D+ + +GSLD +K+WRVT
Sbjct: 422 PVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSGSLDNSVKVWRVT 467
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 111/345 (32%), Positives = 187/345 (54%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD- 143
I +++++DG + +A ++TGSDS IR+WK + + K+ + +V A+ ++ D
Sbjct: 131 IGTIVRQDGHVYSLAASGDLLFTGSDSKNIRVWK--DLKDHTGFKSTSGLVKAIVITGDN 188
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV------RNLI-VGKDK---MMKH 193
R++ + DGKIRVWR + + ++ ++P + +N + V + K ++H
Sbjct: 189 RIFTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRH 248
Query: 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSA 253
++ +++N LYS S DKT+KVWR+ DSKC+E+IQAH + IN + D +L++
Sbjct: 249 YDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTG 308
Query: 254 SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKG 313
S D T++VW+R + H L+ L + + V +++W +G
Sbjct: 309 SADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFW-EG 367
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373
L +GG L+GH AV+CLA+ + V+SG AD VW R DG H+ L+VL+ H G
Sbjct: 368 --QKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVG 425
Query: 374 PIRC--AIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416
P++C A+ G E D+ + +GSLD +K+WRVT S+
Sbjct: 426 PVKCLTAVEDDGEGHREKGDQKWIVYSGSLDKSVKVWRVTESAST 470
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/342 (30%), Positives = 182/342 (53%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD- 143
+ +++++G I +A N +YTGSD+N IR+WK E K+ + +V A+ +S +
Sbjct: 17 VGEIVREEGHIYSLAATNDLLYTGSDNNYIRVWKN--LNEFSGFKSNSGLVKAIVISREA 74
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM----------MKH 193
+V+ + DGKIRVW+++ N + + ++P +++ + + + +KH
Sbjct: 75 KVFTGHQDGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKH 134
Query: 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSA 253
++ +++ LYSAS D+T+KVWRI D KCIE+I+AH + +N++ A+ ++++
Sbjct: 135 SDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAES-LVFTG 193
Query: 254 SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKG 313
S D TV+VW+R + H+L TL + S V +++W G
Sbjct: 194 SADGTVKVWKREIRGKRTAHSLFQTLLKQESAV--TALVTSHMAVYSGSSDGAVNFWEMG 251
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGR-HTMLAVLVGHR 372
L++ + H AV+C+A+ + SG+AD VW RE G+ HT ++VL GH
Sbjct: 252 -DKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRRE--GKVHTCVSVLTGHT 308
Query: 373 GPIRCAIAFLGRFGEETE--DEYCTICTGSLDGVLKMWRVTR 412
GP++C GEE + D + +GSLD +K+WRV R
Sbjct: 309 GPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRVPR 350
Score = 150 (57.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 54/202 (26%), Positives = 84/202 (41%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQP---EFTECG---RLKAKTSMVV 136
+CI S+ D + + ++TGS +++WK+ + T L + S V
Sbjct: 168 KCIESIKAHDDAVNSVTTAESLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVT 227
Query: 137 AMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGP 196
A+ SH VY+ DG + W +KH ++ KH
Sbjct: 228 ALVTSHMAVYSGSSDGAVNFWEMGDKKLLKHCEV-------------------FKKHRLA 268
Query: 197 ITSIAINVSDDTLYSASLDKTIKVWRIRDSK---CIETIQAHSEPINALVVAD------- 246
+ IA + L+S + DK I VWR R+ K C+ + H+ P+ L V +
Sbjct: 269 VLCIA--AAGKLLFSGAADKKICVWR-REGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEE 325
Query: 247 DG-----VLYSASDDATVRVWR 263
DG VLYS S D +V+VWR
Sbjct: 326 DGGDGRLVLYSGSLDKSVKVWR 347
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 104/337 (30%), Positives = 174/337 (51%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAK---TSMVVAMEVSHDRVYAAYGD 151
+ C+AV G+++ S V I+ + + + V ++ S ++++ A+ D
Sbjct: 86 VTCLAVNGGYLFAVSGHEV-SIYDRDMCAHLDTFNGQDPFSGTVKSVGFSGEKIFTAHQD 144
Query: 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM----------MKHMGPITSIA 201
GKI VW+ T +G K +L T+P +R + K+ + ++H +T++A
Sbjct: 145 GKIGVWKLTAKSGYK--QLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWIEHADAVTALA 202
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
VSD +YS S DKT+K+WR D +C E+I+AH + +NA+ V+ +G +Y+ S D +RV
Sbjct: 203 --VSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIRV 260
Query: 262 WRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQY 321
W + + + HTL+ TL S V I W + S +
Sbjct: 261 WAKP--TGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAV 318
Query: 322 GGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
GAL+GH A++ L +V++ ++SGSAD T R+W R D ++ L VL GH P++
Sbjct: 319 RGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKS---- 374
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWRV--TRPKSS 416
L E+ D+ +I +GSLDG +K W+V T+P +S
Sbjct: 375 LAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNS 411
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/297 (31%), Positives = 158/297 (53%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRSTWDN---GVKHVKLATIPKTGGAVRNLIVGKDKM- 190
V ++ + D++ +A+ D KIRVW+ ++ G K+ +AT+P + L K +
Sbjct: 120 VKSLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVE 179
Query: 191 ---------MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ-AHSEPIN 240
+ H+ ++S+A++ LYSAS D++ K+WR D KC+++I+ AH + IN
Sbjct: 180 VRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAIN 239
Query: 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXX 300
A+VV+ DG +Y+ S D ++VW + +++ H+L+ TLT S V
Sbjct: 240 AIVVSKDGFVYTGSADKKIKVWNK----KDKKHSLVATLTKHLSAVNALAISEDGKVLYS 295
Query: 301 XXXXXXIHYWHK--GWFSAQLQYG--GALQGHTHAVMCLASVANYVISGSADSTSRVWAR 356
I W + +L GAL+GH A+MCLA ++ V+SGSAD + RVW R
Sbjct: 296 GACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWRR 355
Query: 357 ---EQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
E++G ++ LAVL GH P++ ++A + D C + +GSLD LK+W +
Sbjct: 356 GLMEKEG-YSCLAVLEGHTKPVK-SLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 97/201 (48%)
Query: 82 YRCISSVLKK-DGQILCIAVG-NGFIYTGSDSNVIRIW--KQPEFTECGRLKAKTSMVVA 137
++C+ S+ K D I I V +GF+YTGS I++W K + + L S V A
Sbjct: 224 FKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNA 283
Query: 138 MEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMG 195
+ +S D +Y+ D I VW + + + ++ + GA+R H
Sbjct: 284 LAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVV----GALRG----------HRK 329
Query: 196 PITSIAINVSDDTLYSASLDKTIKVWR--IRDSK---CIETIQAHSEPINALVVA-DDG- 248
I +A V+ D + S S DK+++VWR + + + C+ ++ H++P+ +L V+ D
Sbjct: 330 AIMCLA--VASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSD 387
Query: 249 -------VLYSASDDATVRVW 262
++YS S D +++VW
Sbjct: 388 SNSDYSCMVYSGSLDLSLKVW 408
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/194 (28%), Positives = 88/194 (45%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRL-KAKTSMVVAMEVSHDR-VYAAYGDGK 153
L ++ +Y+ S +IW+ +F + KA + A+ VS D VY D K
Sbjct: 198 LALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKK 257
Query: 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS 213
I+VW D KH +AT+ K AV L + +D + + G +I V + L +
Sbjct: 258 IKVWNKK-DK--KHSLVATLTKHLSAVNALAISEDGKVLYSGACDR-SILVWE-RLINGD 312
Query: 214 LDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLH 273
D+ + + + ++ H + I L VA D VL S S D ++RVWRR E + +
Sbjct: 313 -DEELHM------SVVGALRGHRKAIMCLAVASDLVL-SGSADKSLRVWRRGLM-EKEGY 363
Query: 274 TLILTLTAKYSPVK 287
+ + L PVK
Sbjct: 364 SCLAVLEGHTKPVK 377
Score = 115 (45.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 38/150 (25%), Positives = 69/150 (46%)
Query: 49 SPISLHTSPLSSPRHPFNXXXXXXXXXXXXXXXYRCISSVLKKDGQILCIAVGNGFIYTG 108
S S +S LS P P + C++++ K + +AV + +YTG
Sbjct: 28 SESSTSSSLLSQPSLPL--VPSLSFQHQSSSVDHHCLATLKDKSSYVSSLAVSDKLLYTG 85
Query: 109 SDSNVIRIW-KQPEFT---ECG---RLKAK-TSMVVAMEVSHDRVYAAYGDGKIRVWRST 160
S ++ IR+W ++P F+ G + A V ++ + D++ +A+ D KIRVW+
Sbjct: 86 SSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRVWKII 145
Query: 161 WDN---GVKHVKLATIPKTGGAVRNLIVGK 187
++ G K+ +AT+P + L K
Sbjct: 146 DESNRRGQKYKCVATLPTMNDRFKTLFSSK 175
Score = 43 (20.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 328 HTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
H AV + L+ + + S S D + ++W R D + + ++ H I +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIW-RTSDFK-CLDSIEKAHDDAINAIVV----- 243
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416
++D + + TGS D +K+W K S
Sbjct: 244 ---SKDGF--VYTGSADKKIKVWNKKDKKHS 269
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 103/355 (29%), Positives = 163/355 (45%)
Query: 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
Y+ ++ + G + +A+ F+ + S I +W+QP+ + V A+
Sbjct: 51 YKPLAVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQQPDLKIFAKFGQGDGSVKALVSV 110
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVKHVKLA-TIPKT----GGAVR--NLIVG----KDKM 190
+V+ A+ D +IRVW+ + N +L T+P T G ++ N + K
Sbjct: 111 GSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLW 170
Query: 191 MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
++H I+ +A++ +YS S DKT+KVWR+ D KC+E+I+AH + IN LV A DG +
Sbjct: 171 IEHADSISCLAVHAG--IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLV-AGDGRV 227
Query: 251 YSASDDATVRVW----RRYFYS----ENQLHTLILTLTAKYS-PVKXXXXXXXXXXXXXX 301
YSAS D V++W R+ S + LH L TL + V
Sbjct: 228 YSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGG 287
Query: 302 XXXXXIHYWHK----GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWARE 357
+ W K G F + + G +GH AV+C+ V V SGSAD + +W RE
Sbjct: 288 GSDGFVIGWEKKEKEGDFE-EWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRRE 346
Query: 358 QDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412
G V+ GH GP++C A G + +G LD L++W V +
Sbjct: 347 VTGMLCKFGVIHGHEGPVKCLQASPNNVGAGF-----MLYSGGLDKSLRVWWVPK 396
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 80/268 (29%), Positives = 138/268 (51%)
Query: 164 GVKHVKLATIPKTGGAVRNLIVGKDKM----------MKHMGPITSIAINVSDDTLYSAS 213
G K++ LAT+P ++ K+++ + H+ ++ +A++ LYS S
Sbjct: 125 GKKYMHLATMPTISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVS 184
Query: 214 LDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSEN-- 270
D+T+K+WR D KC+E+ AH + INA+ ++++G +Y+ S D ++VWR+ EN
Sbjct: 185 WDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVK 244
Query: 271 --QLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXX-XIHYWHKGWFSAQLQYGGALQG 327
+ H+L+ L+ S + I W + + G L+G
Sbjct: 245 KKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERD-DGGDIVVVGMLRG 303
Query: 328 HTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHTMLAVLVGHRGPIRCAI-AFLGRF 385
HT +V+CLA V++ + SGSAD T R+W +D ++ LA+L GH GP++C AF R
Sbjct: 304 HTESVLCLAVVSDILCSGSADKTVRLWKCSAKD--YSCLAMLEGHLGPVKCLTGAF--RD 359
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVTRP 413
+ ++ I +G LD +K+W+V P
Sbjct: 360 SRKADEASYHIYSGGLDSQVKVWQVLVP 387
Score = 233 (87.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 59/216 (27%), Positives = 111/216 (51%)
Query: 82 YRCISS-VLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQ------PEFTECGRL----KA 130
++CI++ V I + + +YTGS+ V+R+W E + G + +
Sbjct: 27 HQCIATLVCHTASYISSLTLAGKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERG 86
Query: 131 KTSMVVAMEVSHDRVYAAYGDGKIRVWRST----WD-NGVKHVKLATIPKTGGAVRNLIV 185
V ++ + D+++ A+ D KIRVW+ D G K++ LAT+P ++
Sbjct: 87 GGGAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLM 146
Query: 186 GKDKM----------MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QA 234
K+++ + H+ ++ +A++ LYS S D+T+K+WR D KC+E+ A
Sbjct: 147 PKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNA 206
Query: 235 HSEPINALVVADDGVLYSASDDATVRVWRRYFYSEN 270
H + INA+ ++++G +Y+ S D ++VWR+ EN
Sbjct: 207 HDDAINAVALSENGDIYTGSSDQRIKVWRKNINEEN 242
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 52/196 (26%), Positives = 90/196 (45%)
Query: 82 YRCISSVLKK-DGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
++C+ S D I +A+ NG IYTGS I++W++ E + K K S+V +
Sbjct: 197 FKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILS 256
Query: 140 VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKT-GGAVRNLIVGKDKMMKHMGPIT 198
+ + A G S +G + + GG + ++VG + H +
Sbjct: 257 EHNSGINALALSGTNG---SLLHSGGSDGSILVWERDDGGDI--VVVGM--LRGHTESVL 309
Query: 199 SIAINVSDDTLYSASLDKTIKVWRI--RDSKCIETIQAHSEPINALV-------VADDGV 249
+A+ VSD L S S DKT+++W+ +D C+ ++ H P+ L AD+
Sbjct: 310 CLAV-VSD-ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEAS 367
Query: 250 --LYSASDDATVRVWR 263
+YS D+ V+VW+
Sbjct: 368 YHIYSGGLDSQVKVWQ 383
Score = 83 (34.3 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 325 LQGHTHAVMCLA-SVANYVI--SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
L H + LA S N + SG +D + VW R+ G ++ +L GH + C +A
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLC-LAV 313
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGH 426
+ +C+GS D +++W+ + SC L GH
Sbjct: 314 VSDI----------LCSGSADKTVRLWKCSAKDYSC--LAMLEGH 346
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 140 (54.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 195 GPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLYS 252
G S+ D TL S S D T+K+W K I T++ H+ P+N++ ++ D G++ S
Sbjct: 351 GHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLS 409
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
SDD+T+++W + +T + T +A PV+ K
Sbjct: 410 GSDDSTIKIWSL------ETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTI------K 457
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
W + + L GH V +A+ +ISG+ D +VW
Sbjct: 458 QWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVW 499
Score = 137 (53.3 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H GP+ S+ I + S S D TIK+W + + C+ T AH P+ +L +AD L+S
Sbjct: 391 HTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSR-LFS 449
Query: 253 ASDDATVRVWRRYFYSENQLHTL 275
S D T++ W + +HTL
Sbjct: 450 CSLDGTIKQWD--IEKKKCVHTL 470
Score = 136 (52.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H+GP+ S+A+ +D L+S SLD TIK W I KC+ T+ H E + + AD L S
Sbjct: 433 HIGPVQSLAL--ADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWE-IAADHLRLIS 489
Query: 253 ASDDATVRVW 262
+ D V+VW
Sbjct: 490 GAHDGVVKVW 499
Score = 124 (48.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/163 (25%), Positives = 64/163 (39%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYS 268
L S S+DKTI++W R S+CI + H++ + L D +L S S D TV++W +F
Sbjct: 326 LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF-DSTLLVSGSADCTVKLW--HFSG 382
Query: 269 ENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGH 328
++ TL PV I W + + H
Sbjct: 383 GKRI-----TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA----H 433
Query: 329 THAVMCLASVANYVISGSADSTSRVWAREQDGR-HTMLAVLVG 370
V LA + + S S D T + W E+ HT+ + G
Sbjct: 434 IGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEG 476
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 47/170 (27%), Positives = 70/170 (41%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYS 268
L S S D TI++W + + + ++ HS + L D L S S D T+R+W Y S
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF-DQCKLISGSMDKTIRIWN-YRTS 343
Query: 269 ENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGH 328
E I L V + WH FS + L+GH
Sbjct: 344 E-----CISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWH---FSGGKRI--TLRGH 391
Query: 329 THAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIR 376
T V + + + V+SGS DST ++W+ E + T L H GP++
Sbjct: 392 TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN---TCLHTFSAHIGPVQ 438
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 325 LQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L+GHT V + + + V+SGS DST ++W+ E + T L H GP++ ++A
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN---TCLHTFSAHIGPVQ-SLALA 443
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH 419
D C SLDG +K W + + K C H
Sbjct: 444 --------DSRLFSC--SLDGTIKQWDIEKKK--CVH 468
Score = 84 (34.6 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 83 RCISSVLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC VL DG ++C+ + + +GS IR+W F + L+ +S V ++
Sbjct: 263 RCRQVVLSGHSDG-VMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF 321
Query: 141 SHDRVYAAYGDGKIRVW 157
++ + D IR+W
Sbjct: 322 DQCKLISGSMDKTIRIW 338
Score = 58 (25.5 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W + + L GH V +A+ +ISG+ D +VW + HT L H
Sbjct: 457 KQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVW-EACECVHT----LKNH 511
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
P+ ++A LG D C + +GS DG + +W
Sbjct: 512 SEPVT-SVA-LG-------D--CEVVSGSEDGKIYLW 537
Score = 53 (23.7 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 14/64 (21%), Positives = 26/64 (40%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + +GS IRIW +EC L T V+ + + + D
Sbjct: 316 VTCLQFDQCKLISGSMDKTIRIWNY-RTSECISILHGHTDSVLCLTFDSTLLVSGSADCT 374
Query: 154 IRVW 157
+++W
Sbjct: 375 VKLW 378
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 63/203 (31%), Positives = 103/203 (50%)
Query: 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEV 140
+ C+S VL+ D + + + G++++GS + I++W F EC + LK + V A+ V
Sbjct: 502 FECLS-VLRDDNTVCALVIAAGYLFSGSFQH-IKVWDLETF-ECVQTLKGNSHWVRALTV 558
Query: 141 SHDRVYA-AYGDGKIRVWR-------STWDNGVKHV-KLATIPKT--GGAVRNLIV--GK 187
S +Y+ AY +RVW T G + LA + G N IV
Sbjct: 559 SGGYLYSGAYN--VVRVWDLANFECVQTIPGGSGSIYSLAVSNRRLLAGTYENTIVVWNL 616
Query: 188 D------KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK-CIETIQAHSEPIN 240
D K+ H+G + ++A VSD YS S D TIKVW DS C++T+ H+ +
Sbjct: 617 DTFEIINKLEGHIGAVYTLA--VSDKKFYSGSYDSTIKVWN--DSLVCVQTLNRHTSSVE 672
Query: 241 ALVVADDGVLYSASDDATVRVWR 263
++VV+ G ++S S D +++VW+
Sbjct: 673 SIVVSS-GCVFSGSADNSIKVWK 694
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 68/288 (23%), Positives = 122/288 (42%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVS 141
+C + + +G I C+ V NG + +GS ++IW +C + L +V + V
Sbjct: 423 KCKGTFVGHNGPIWCMTVTNGMLISGSSDMKVKIWDLVTL-KCKQVLSGHEGIVHTLAVI 481
Query: 142 HDRVYAAYGDGKIRVWR-STW--------DNGVKHVKLATIPKTGGAVRNLIVGKDKMMK 192
+R+++ D IRVW T+ DN V + +A G+ +++ V + +
Sbjct: 482 GNRLFSGSSDQTIRVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSFQHIKVWDLETFE 541
Query: 193 HMGPITSI-----AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
+ + A+ VS LYS + + ++VW + + +C++TI S I +L V++
Sbjct: 542 CVQTLKGNSHWVRALTVSGGYLYSGAYN-VVRVWDLANFECVQTIPGGSGSIYSLAVSNR 600
Query: 248 GVLYSASDDATVRVWRR-YFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
+L ++ T+ VW F N+L I A Y+
Sbjct: 601 RLLAGTYEN-TIVVWNLDTFEIINKLEGHI---GAVYT------LAVSDKKFYSGSYDST 650
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
I W+ Q L HT +V + + V SGSAD++ +VW
Sbjct: 651 IKVWNDSLVCVQ-----TLNRHTSSVESIVVSSGCVFSGSADNSIKVW 693
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 140 (54.3 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 17 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 76
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 77 LIASCSNDQTVRVW 90
Score = 63 (27.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVW 354
L H H V L A YV++GS D T +VW
Sbjct: 171 LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 143 (55.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T K V+++
Sbjct: 118 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 141 SHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200
S D A G +++ WD P TG + ++ G K + + +
Sbjct: 178 SPDGKKLASGCKNSQIF--LWD-----------PATGNQIGRVLTGHSKWITCLC-WEPL 223
Query: 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVR 260
IN L SAS D +I++W +C + + H++ + + DG+LYS+S D T++
Sbjct: 224 HINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIK 283
Query: 261 VWR 263
VWR
Sbjct: 284 VWR 286
Score = 118 (46.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 170 LATIPKTGGA-VRNLIVGK-DKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS 226
LA+ K G + + ++G+ DK++ H +T + D LYS+S D+TIKVWR +D
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWG-GDGLLYSSSQDRTIKVWRSQDG 290
Query: 227 KCIETIQAHSEPINALVVADDGVL 250
T+Q H+ +N + ++ D VL
Sbjct: 291 ILCRTLQGHAHWVNTMALSTDYVL 314
Score = 111 (44.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 188 DKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VAD 246
++M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 379 ERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSAD 438
Query: 247 DGVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 439 SRLLVSGSSDSTLKVW 454
Score = 94 (38.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW K + H++ + A + DG +
Sbjct: 426 HVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVA 485
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 486 SGGKDKCLRIWRR 498
Score = 84 (34.6 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D LA+ L
Sbjct: 410 KLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVW----DAETKKLAIDL 465
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + F + + + +G D L++WR
Sbjct: 466 PGHADEV---------FATDWSPDGQRVASGGKDKCLRIWR 497
Score = 71 (30.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 250 RCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALS 309
Query: 142 HDRV 145
D V
Sbjct: 310 TDYV 313
Score = 52 (23.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W +D + L + GH+ I + F +T I + S
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKP--LERMTGHQALINQVL-----FSPDTR----IIASASF 405
Query: 402 DGVLKMWRVTRPKSSCGHLNKTNGH 426
D +K+W K +L GH
Sbjct: 406 DKSIKLWEGRTGK----YLTSLRGH 426
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
LQGH H V +A +YV+ A + QD
Sbjct: 296 LQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQD 330
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 140 (54.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 20 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 79
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 80 LIASCSNDQTVRVW 93
Score = 63 (27.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVW 354
L H H V L A YV++GS D T +VW
Sbjct: 174 LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 137 (53.3 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA 245
+ + +H I IA+N D ++ S SLDKT+KVW++ + + I T++ H + +N +
Sbjct: 227 EQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL 286
Query: 246 DDGVLYSASDDATVRVW 262
G + S SDD ++ VW
Sbjct: 287 TGGRIVSGSDDCSICVW 303
Score = 94 (38.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQ-AHSEPINALVVADDGVLYSASDDATVRVWRRYFY 267
+ S S D +I VW I+ KCIET++ AH + + ++ S ++D+TV++W +
Sbjct: 291 IVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWII-SGAEDSTVKIWNSQTF 349
Query: 268 S-ENQLH 273
S E +L+
Sbjct: 350 SLEKELN 356
Score = 68 (29.0 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVY--AAYGDGKIRVWRSTW 161
+I T SD IRI+ F+ A + + ++ V Y +A D KIRVW W
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVW--DW 220
Query: 162 DN 163
+N
Sbjct: 221 EN 222
Score = 53 (23.7 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVW 354
H + V + ++ISG+ DST ++W
Sbjct: 318 HKNNVTFVTPFKTWIISGAEDSTVKIW 344
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/188 (24%), Positives = 80/188 (42%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H G + + + D + S S D T++VW + + + T+ H E + L ++G+
Sbjct: 246 LMGHTGSV--LCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-NNGM 302
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
+ + S D ++ VW SE L +++ A + V
Sbjct: 303 MVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI------- 355
Query: 310 WHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369
K W ++ ++ L GH + CL V+SGS+D++ R+W E L VL
Sbjct: 356 --KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGA---CLRVLE 410
Query: 370 GHRGPIRC 377
GH +RC
Sbjct: 411 GHEELVRC 418
Score = 116 (45.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W D +C++T+ H+ + L DD V+ S S D+TVRV
Sbjct: 216 LQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY-DDKVIISGSSDSTVRV 274
Query: 262 W 262
W
Sbjct: 275 W 275
Score = 109 (43.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D++ R+W E L VL GH
Sbjct: 356 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGA---CLRVLEGH 412
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF +T+ I +G+ DG +K+W
Sbjct: 413 EELVRCI-----RF--DTK----RIVSGAYDGKIKVW 438
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ +G I +G N I+IW + + +C + L T V+ ++ + + D
Sbjct: 213 VYCLQYDDGKIVSGLRDNTIKIWDRTDL-QCVKTLMGHTGSVLCLQYDDKVIISGSSDST 271
Query: 154 IRVW 157
+RVW
Sbjct: 272 VRVW 275
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
+C+ +++ G +LC+ + I +GS + +R+W L V+ + ++
Sbjct: 241 QCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNN 300
Query: 143 DRVYAAYGDGKIRVWRST 160
+ D I VW T
Sbjct: 301 GMMVTCSKDRSIAVWDMT 318
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W +E + A+ V D Y +A GD
Sbjct: 293 VLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGD 352
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 353 RTIKVWSTS 361
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/221 (25%), Positives = 89/221 (40%)
Query: 205 SDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRR 264
+D + Y + DK K W ++ H + + + D VL + SDD T++VW
Sbjct: 225 ADKSRYLRA-DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-- 281
Query: 265 YFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGA 324
+ ++ + TL V + W L +
Sbjct: 282 -CIDKGEV---MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST--VDGSLLH--T 333
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
LQGHT V C+A + +++GS D+T RVW E GRH LA L GH +RC + F G
Sbjct: 334 LQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES-GRH--LATLHGHHAAVRC-VQFDGT 389
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPK---SSCGHLNK 422
T+ +G D +K+W + + GH N+
Sbjct: 390 ----------TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/184 (26%), Positives = 78/184 (42%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
++ H G + + I+ + S S D+T+KVW D + T+Q H+ + + +A +
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS-I 350
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
L + S D T+RVW E+ H + TL ++ V+ I
Sbjct: 351 LVTGSRDTTLRVWD----VESGRH--LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 310 WHKGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAV 367
H G + L GH + V L S + V SGS D++ RVW + +A+
Sbjct: 405 AHTG------RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 368 LVGH 371
L GH
Sbjct: 459 LQGH 462
Score = 140 (54.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 55/220 (25%), Positives = 84/220 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H + +A+ + L + S D T++VW + + + T+ H + V D + S
Sbjct: 337 HTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC-VQFDGTTVVS 393
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
D TV++W + I TLT + V I W
Sbjct: 394 GGYDFTVKIWNAH------TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
Q + LQGHT + N ++S +ADS RVW + T + +L GHR
Sbjct: 448 TRPEGQ-ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEG---TCVHMLSGHR 503
Query: 373 GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412
AI L FG + T S DG +K+W + R
Sbjct: 504 S----AITSLQWFGRNM------VATSSDDGTVKLWDIER 533
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 51/211 (24%), Positives = 83/211 (39%)
Query: 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD 225
++++ I K A N I+G + H + + + + DD L + S D T+KVW I
Sbjct: 229 RYLRADKIEKNWNA--NPIMGSAVLRGHEDHVIT-CMQIHDDVLVTGSDDNTLKVWCIDK 285
Query: 226 SKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYS 284
+ + T+ H+ + ++ G + S S D TV+VW + LHTL S
Sbjct: 286 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV--DGSLLHTL----QGHTS 339
Query: 285 PVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVIS 344
V+ + W ++ L GH AV C+ V+S
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRV------WDVESGRHLATLHGHHAAVRCVQFDGTTVVS 393
Query: 345 GSADSTSRVWAREQDGRHTMLAVLVGHRGPI 375
G D T ++W GR + L GH +
Sbjct: 394 GGYDFTVKIW-NAHTGR--CIRTLTGHNNRV 421
Score = 116 (45.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV C+ V+SG D T ++W GR + L GH + ++ F
Sbjct: 374 LHGHHAAVRCVQFDGTTVVSGGYDFTVKIW-NAHTGR--CIRTLTGHNNRVY-SLLF--- 426
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSS-C-----GHLNKTNG 425
E E +C+GSLD +++W TRP+ C GH + T+G
Sbjct: 427 -----ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG 468
Score = 84 (34.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 86 SSVLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
S+VL+ +D I C+ + + + TGSD N +++W + L T V ++S
Sbjct: 248 SAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQC 307
Query: 144 RVYAAYG--DGKIRVWRSTWDNGVKH 167
Y G D ++VW ST D + H
Sbjct: 308 GRYIVSGSTDRTVKVW-STVDGSLLH 332
Score = 64 (27.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDN 163
+I +GS +++W + + L+ TS V M ++ + D +RVW ++
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDV--ES 367
Query: 164 GVKHVKLATIPKTGGAVR 181
G +H LAT+ AVR
Sbjct: 368 G-RH--LATLHGHHAAVR 382
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/221 (25%), Positives = 89/221 (40%)
Query: 205 SDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRR 264
+D + Y + DK K W ++ H + + + D VL + SDD T++VW
Sbjct: 225 ADKSRYLRA-DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-- 281
Query: 265 YFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGA 324
+ ++ + TL V + W L +
Sbjct: 282 -CIDKGEV---MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST--VDGSLLH--T 333
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
LQGHT V C+A + +++GS D+T RVW E GRH LA L GH +RC + F G
Sbjct: 334 LQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES-GRH--LATLHGHHAAVRC-VQFDGT 389
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPK---SSCGHLNK 422
T+ +G D +K+W + + GH N+
Sbjct: 390 ----------TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/184 (26%), Positives = 78/184 (42%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
++ H G + + I+ + S S D+T+KVW D + T+Q H+ + + +A +
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS-I 350
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
L + S D T+RVW E+ H + TL ++ V+ I
Sbjct: 351 LVTGSRDTTLRVWD----VESGRH--LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 310 WHKGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAV 367
H G + L GH + V L S + V SGS D++ RVW + +A+
Sbjct: 405 AHTG------RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 368 LVGH 371
L GH
Sbjct: 459 LQGH 462
Score = 140 (54.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 55/220 (25%), Positives = 84/220 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H + +A+ + L + S D T++VW + + + T+ H + V D + S
Sbjct: 337 HTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC-VQFDGTTVVS 393
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
D TV++W + I TLT + V I W
Sbjct: 394 GGYDFTVKIWNAH------TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
Q + LQGHT + N ++S +ADS RVW + T + +L GHR
Sbjct: 448 TRPEGQ-ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEG---TCVHMLSGHR 503
Query: 373 GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412
AI L FG + T S DG +K+W + R
Sbjct: 504 S----AITSLQWFGRNM------VATSSDDGTVKLWDIER 533
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 51/211 (24%), Positives = 83/211 (39%)
Query: 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD 225
++++ I K A N I+G + H + + + + DD L + S D T+KVW I
Sbjct: 229 RYLRADKIEKNWNA--NPIMGSAVLRGHEDHVIT-CMQIHDDVLVTGSDDNTLKVWCIDK 285
Query: 226 SKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYS 284
+ + T+ H+ + ++ G + S S D TV+VW + LHTL S
Sbjct: 286 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV--DGSLLHTL----QGHTS 339
Query: 285 PVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVIS 344
V+ + W ++ L GH AV C+ V+S
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRV------WDVESGRHLATLHGHHAAVRCVQFDGTTVVS 393
Query: 345 GSADSTSRVWAREQDGRHTMLAVLVGHRGPI 375
G D T ++W GR + L GH +
Sbjct: 394 GGYDFTVKIW-NAHTGR--CIRTLTGHNNRV 421
Score = 116 (45.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV C+ V+SG D T ++W GR + L GH + ++ F
Sbjct: 374 LHGHHAAVRCVQFDGTTVVSGGYDFTVKIW-NAHTGR--CIRTLTGHNNRVY-SLLF--- 426
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSS-C-----GHLNKTNG 425
E E +C+GSLD +++W TRP+ C GH + T+G
Sbjct: 427 -----ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG 468
Score = 84 (34.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 86 SSVLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
S+VL+ +D I C+ + + + TGSD N +++W + L T V ++S
Sbjct: 248 SAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQC 307
Query: 144 RVYAAYG--DGKIRVWRSTWDNGVKH 167
Y G D ++VW ST D + H
Sbjct: 308 GRYIVSGSTDRTVKVW-STVDGSLLH 332
Score = 64 (27.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDN 163
+I +GS +++W + + L+ TS V M ++ + D +RVW ++
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDV--ES 367
Query: 164 GVKHVKLATIPKTGGAVR 181
G +H LAT+ AVR
Sbjct: 368 G-RH--LATLHGHHAAVR 382
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 46/185 (24%), Positives = 76/185 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + S S D T++VW + +CI+T+ H E + L A+ G++ +
Sbjct: 261 HTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFAN-GIMVT 317
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW S + T+ L + V +
Sbjct: 318 CSKDRSIAVWD--MVSPRDI-TIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKV----- 369
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W L++ L GH + CL V+SGS+D+T R+W L VL GH
Sbjct: 370 -WSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG---VCLRVLEGHE 425
Query: 373 GPIRC 377
+RC
Sbjct: 426 ELVRC 430
Score = 116 (45.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W L++ L GH + CL V+SGS+D+T R+W L VL GH
Sbjct: 368 KVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG---VCLRVLEGH 424
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF E+ I +G+ DG +K+W
Sbjct: 425 EELVRCI-----RFDEKR------IVSGAYDGKIKVW 450
Score = 111 (44.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D TIK+W +D C + H+ + L D+ V+ S S DATVRV
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY-DNRVIISGSSDATVRV 286
Query: 262 W 262
W
Sbjct: 287 W 287
Score = 86 (35.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 29/103 (28%), Positives = 44/103 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + + L GHR I C + + GR
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGIAC-LQYRGR 396
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+ +GS D +++W + C L GHE
Sbjct: 397 L----------VVSGSSDNTIRLWDIH--SGVC--LRVLEGHE 425
Score = 81 (33.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + +++ C R L T V+ ++ + + + D
Sbjct: 225 VYCLQYDDDKIVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVLCLQYDNRVIISGSSDAT 283
Query: 154 IRVW 157
+RVW
Sbjct: 284 VRVW 287
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEV 140
Y C + G +LC+ N I +GS +R+W E EC + L V+ +
Sbjct: 252 YSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVW-DVETGECIKTLIHHCEAVLHLRF 310
Query: 141 SHDRVYAAYGDGKIRVW 157
++ + D I VW
Sbjct: 311 ANGIMVTCSKDRSIAVW 327
Score = 47 (21.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 246 DDGVLYSASDDATVRVWRRYFYS 268
DD + S D T+++W R YS
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYS 253
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 46/185 (24%), Positives = 76/185 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + S S D T++VW + +CI+T+ H E + L A+ G++ +
Sbjct: 261 HTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFAN-GIMVT 317
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW S + T+ L + V +
Sbjct: 318 CSKDRSIAVWD--MVSPRDI-TIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKV----- 369
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W L++ L GH + CL V+SGS+D+T R+W L VL GH
Sbjct: 370 -WSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG---VCLRVLEGHE 425
Query: 373 GPIRC 377
+RC
Sbjct: 426 ELVRC 430
Score = 116 (45.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W L++ L GH + CL V+SGS+D+T R+W L VL GH
Sbjct: 368 KVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG---VCLRVLEGH 424
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF E+ I +G+ DG +K+W
Sbjct: 425 EELVRCI-----RFDEKR------IVSGAYDGKIKVW 450
Score = 111 (44.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D TIK+W +D C + H+ + L D+ V+ S S DATVRV
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY-DNRVIISGSSDATVRV 286
Query: 262 W 262
W
Sbjct: 287 W 287
Score = 86 (35.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 29/103 (28%), Positives = 44/103 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + + L GHR I C + + GR
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGIAC-LQYRGR 396
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+ +GS D +++W + C L GHE
Sbjct: 397 L----------VVSGSSDNTIRLWDIH--SGVC--LRVLEGHE 425
Score = 81 (33.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + +++ C R L T V+ ++ + + + D
Sbjct: 225 VYCLQYDDDKIVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVLCLQYDNRVIISGSSDAT 283
Query: 154 IRVW 157
+RVW
Sbjct: 284 VRVW 287
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEV 140
Y C + G +LC+ N I +GS +R+W E EC + L V+ +
Sbjct: 252 YSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVW-DVETGECIKTLIHHCEAVLHLRF 310
Query: 141 SHDRVYAAYGDGKIRVW 157
++ + D I VW
Sbjct: 311 ANGIMVTCSKDRSIAVW 327
Score = 47 (21.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 246 DDGVLYSASDDATVRVWRRYFYS 268
DD + S D T+++W R YS
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYS 253
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 50/162 (30%), Positives = 72/162 (44%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H GP+ SI N D L+S S D +IKVW ++ +CI T++ H +P++ V+ +D L+S
Sbjct: 501 HEGPVESICYN--DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHT-VLLNDKYLFS 557
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D T++VW L TL T + I W
Sbjct: 558 GSSDKTIKVW--------DLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDL 609
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
F + Y L+GHT V + + + SGS D T RVW
Sbjct: 610 KTF--RCNY--TLKGHTKWVTTICILGTNLYSGSYDKTIRVW 647
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/197 (23%), Positives = 95/197 (48%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ ++ +G + I + ++++GS + I++W + L+ V + ++
Sbjct: 494 CVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDK 553
Query: 144 RVYAAYGDGKIRVW-------RSTWDNGVKHVKLATIPK----TGGAVRNLIVGKDKMMK 192
+++ D I+VW + T ++ + VK I +G + + V K +
Sbjct: 554 YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFR 613
Query: 193 -------HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA 245
H +T+I I ++ LYS S DKTI+VW ++ +C T++ H + +V+
Sbjct: 614 CNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC 671
Query: 246 DDGVLYSASDDATVRVW 262
D +L++ASDD T+++W
Sbjct: 672 DK-LLFTASDDNTIKIW 687
Score = 159 (61.0 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 53/216 (24%), Positives = 89/216 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H P+ ++ +N D L+S S DKTIKVW ++ +C T+++H+ + L ++ L+S
Sbjct: 541 HDKPVHTVLLN--DKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQ-YLFS 597
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S+D T++VW L T T K I W+
Sbjct: 598 GSNDKTIKVW--------DLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNL 649
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
L+ L+GH V + + + S D+T ++W E +T L GH
Sbjct: 650 ----KSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLE---GHN 702
Query: 373 GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
++C + ED+ C I S D +++W
Sbjct: 703 ATVQCLAVW--------EDKKCVISC-SHDQSIRVW 729
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 48/199 (24%), Positives = 91/199 (45%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
RCI ++ D + + + + ++++GS I++W L++ V + +S
Sbjct: 533 RCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISG 592
Query: 143 DRVYAAYGDGKIRVWR-STW--DNGVK-HVKLATIPKTGGAVRNLIVGK-DKMMK--HMG 195
+++ D I+VW T+ + +K H K T G NL G DK ++ ++
Sbjct: 593 QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGT--NLYSGSYDKTIRVWNLK 650
Query: 196 PITSIA-----------INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
+ A + + D L++AS D TIK+W + +C T++ H+ + L V
Sbjct: 651 SLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAV 710
Query: 245 ADDG-VLYSASDDATVRVW 262
+D + S S D ++RVW
Sbjct: 711 WEDKKCVISCSHDQSIRVW 729
Score = 129 (50.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 37/153 (24%), Positives = 66/153 (43%)
Query: 204 VSDDTLYSASLDKTIKVW--RIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ L++ D +I+V+ + ++ +C++T++ H P+ ++ +D L+S S D +++V
Sbjct: 468 ICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICY-NDQYLFSGSSDHSIKV 526
Query: 262 WRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQY 321
W +L I TL PV + W L+
Sbjct: 527 W-----DLKKLRC-IFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKV------WDLKTLEC 574
Query: 322 GGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
L+ H AV L Y+ SGS D T +VW
Sbjct: 575 KYTLESHARAVKTLCISGQYLFSGSNDKTIKVW 607
Score = 61 (26.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIWK-QPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
LCI + ++TG N IR++ + + EC + LK V ++ + +++ D
Sbjct: 466 LCIC--DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHS 523
Query: 154 IRVW 157
I+VW
Sbjct: 524 IKVW 527
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 141 (54.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T + V+++
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G+I +W D P TG V ++ G K + +
Sbjct: 116 SPDGKTLASGCKNGQILLW----D-----------PSTGKQVGRVLAGHSKWITGLS-WE 159
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ N + S+S D +++VW +C + H++ + L DG+LYSAS D T
Sbjct: 160 PLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT 219
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 220 IKVWRAH 226
Score = 107 (42.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 318 RMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 377
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 378 RLLVSGSSDSTLKVW 392
Score = 105 (42.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 152 GKIRVWRSTWDNGVKHVKLATIPKT--------GGAVR--NLIVGK-DKMMK-HMGPITS 199
G++ S W G+ L P+ G+VR + G+ ++++ H +T
Sbjct: 143 GRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTC 202
Query: 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
+ D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 203 LRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 252
Score = 104 (41.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 364 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA 423
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 424 SGGKDKCLRIWRR 436
Score = 77 (32.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + LA L
Sbjct: 348 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLAADL 403
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 404 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 435
Score = 64 (27.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 188 RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 247
Query: 142 HD 143
D
Sbjct: 248 TD 249
Score = 53 (23.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + LA + GH+ I + F ++ I + S
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKP--LARMTGHQALINQVL-----FSPDSR----IIASASF 343
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 344 DKSIKLW 350
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/104 (28%), Positives = 46/104 (44%)
Query: 325 LQGHTHAV-MCLASVANYVI-SGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAF 381
+ GH + L S + +I S S D + ++W DGR LA L GH + IA+
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW 373
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC---GHLNK 422
+ D + +GS D LK+W V K + GH ++
Sbjct: 374 -------SADSRLLV-SGSSDSTLKVWDVKAQKLAADLPGHADE 409
Score = 43 (20.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
LQGH H V +A +Y + A + QD
Sbjct: 234 LQGHGHWVNTMALSTDYALRTGAFEPAEASINAQD 268
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 54/184 (29%), Positives = 84/184 (45%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
++ H G + S +S + + S S D+T+KVW + C+ T+Q H+ + + + V
Sbjct: 1031 LVGHTGGVWSS--QMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKV 1088
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
+ S S DAT+RVW + LH L+ L A V+ Y
Sbjct: 1089 V-SGSRDATLRVWD--IEQGSCLHVLVGHLAA----VRCVQYDGKLIVSGAYD------Y 1135
Query: 310 WHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG-RHTMLAVL 368
K W + + LQGHT+ V L +V+SGS D++ RVW E +HT L
Sbjct: 1136 MVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHT----L 1191
Query: 369 VGHR 372
+GH+
Sbjct: 1192 MGHQ 1195
Score = 131 (51.2 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
LQGHT V C+ + V+SGS D+T RVW EQ + L VLVGH +RC + + G+
Sbjct: 1071 LQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQG---SCLHVLVGHLAAVRC-VQYDGK 1126
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
I +G+ D ++K+W R + C H + + + + LQ
Sbjct: 1127 L----------IVSGAYDYMVKIWHPERQE--CLHTLQGHTNRVYSLQ 1162
Score = 127 (49.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/197 (22%), Positives = 82/197 (41%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
+C+ +++ G + + I +GS +++W L+ TS V M +
Sbjct: 1026 KCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHG 1085
Query: 143 DRVYAAYGDGKIRVWRSTWDNGVKHV---KLATIPKTGGAVRNLIVGK-DKMMKHMGPI- 197
+V + D +RVW HV LA + + ++ G D M+K P
Sbjct: 1086 SKVVSGSRDATLRVW-DIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPER 1144
Query: 198 ----------TSIAINVSDDTLY--SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA 245
T+ ++ D L+ S SLD +I+VW + C T+ H + + +
Sbjct: 1145 QECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR 1204
Query: 246 DDGVLYSASDDATVRVW 262
+ +L S + D+TV+VW
Sbjct: 1205 QN-ILVSGNADSTVKVW 1220
Score = 114 (45.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 50/213 (23%), Positives = 92/213 (43%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++S +
Sbjct: 989 VLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVN-GKCLRTLVGHTGGVWSSQMSGNI 1047
Query: 145 VYAAYGDGKIRVWRSTWDNGV------KHVKLATIPKTGGAVRNLIVG-KDKMMK----- 192
+ + D ++VW D+G H G+ ++ G +D ++
Sbjct: 1048 IISGSTDRTLKVW--DMDSGACVHTLQGHTSTVRCMHLHGS--KVVSGSRDATLRVWDIE 1103
Query: 193 -----HM--GPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
H+ G + ++ + + S + D +K+W +C+ T+Q H+ + +L
Sbjct: 1104 QGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF 1163
Query: 245 ADDGV-LYSASDDATVRVWRRYFYSENQLHTLI 276
DG+ + S S D ++RVW + N HTL+
Sbjct: 1164 --DGLHVVSGSLDTSIRVWD--VETGNCKHTLM 1192
Score = 100 (40.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 181 RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240
R+ V K K++K + S + + S S D T+KVW + KC+ T+ H+ +
Sbjct: 980 RSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVW 1039
Query: 241 ALVVADDGVLYSASDDATVRVW 262
+ ++ + ++ S S D T++VW
Sbjct: 1040 SSQMSGN-IIISGSTDRTLKVW 1060
Score = 91 (37.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 309 YWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG-RHTMLAV 367
Y K W + + LQGHT+ V L +V+SGS D++ RVW E +HT
Sbjct: 1135 YMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHT---- 1190
Query: 368 LVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411
L+GH+ G E + +G+ D +K+W +T
Sbjct: 1191 LMGHQSLTS---------GMELRQNI--LVSGNADSTVKVWDIT 1223
Score = 74 (31.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 28/89 (31%), Positives = 39/89 (43%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG---HRGPIRCAIAF 381
L GH + N ++SG+ADST +VW G+ L L G H + C + F
Sbjct: 1191 LMGHQSLTSGMELRQNILVSGNADSTVKVWDITT-GQ--CLQTLSGPNKHHSAVTC-LQF 1246
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWRV 410
RF + T S DG +K+W V
Sbjct: 1247 NSRF----------VVTSSDDGTVKLWDV 1265
Score = 58 (25.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR R + + ++ H + + + + S SDD T++VW
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVW 1020
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHTMLAVLVGHRGPI 375
H AV CL + +V++ S D T ++W + D ++A+ G G +
Sbjct: 1237 HHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGV 1285
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 144 (55.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 48/187 (25%), Positives = 81/187 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T + V+++
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 165
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G+I +W D P TG V + G K + +
Sbjct: 166 SPDGKKLASGCKNGQILLW----D-----------PSTGKQVGRALTGHSKWITALS-WE 209
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ N + S+S D +++VW +C T+ H++ + L DG+LYSAS D T
Sbjct: 210 PLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRT 269
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 270 IKVWRAH 276
Score = 109 (43.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 368 RMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 427
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 428 RLLVSGSSDSTLKVW 442
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 258 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 302
Score = 103 (41.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 414 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVA 473
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 474 SGGKDKCLRIWRR 486
Score = 74 (31.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + L+ L
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLSTDL 453
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 454 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 485
Score = 66 (28.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC ++ + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 238 RCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 297
Query: 142 HD 143
D
Sbjct: 298 TD 299
Score = 55 (24.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + LA + GH+ I + F ++ I + S
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVV-----FSPDSR----VIASASF 393
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 394 DKSIKLW 400
Score = 51 (23.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 342 VISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
+ S S D + ++W DGR LA L GH + IA+ + D + +GS
Sbjct: 388 IASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW-------SADSRLLV-SGS 434
Query: 401 LDGVLKMWRVTRPKSSC---GHLNK 422
D LK+W V K S GH ++
Sbjct: 435 SDSTLKVWDVKAQKLSTDLPGHADE 459
Score = 46 (21.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTM 364
LQGH H V +A +Y + A + QD R ++
Sbjct: 284 LQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 323
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 141 (54.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T K V+++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G++ +W D P TG V + G K + +
Sbjct: 165 SPDGKKLASGCKNGQVLLW----D-----------PSTGLQVGRTLTGHSKWITGLS-WE 208
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ +N + S+S D +++VW +C + H++ + L DG+LYSAS D T
Sbjct: 209 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT 268
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 269 IKVWRAH 275
Score = 106 (42.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 427 RLLVSGSSDSTLKVW 441
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 473 SGGKDKCLRIWRR 485
Score = 103 (41.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 257 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 77 (32.2 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + LA L
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLATDL 452
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 453 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 64 (27.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 142 HD 143
D
Sbjct: 297 TD 298
Score = 52 (23.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + LA + GH+ I + F ++ + + S
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVL-----FSPDSR----IVASASF 392
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 393 DKSIKLW 399
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 342 VISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
V S S D + ++W DGR LA L GH + IA+ + D + +GS
Sbjct: 387 VASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW-------SADSRLLV-SGS 433
Query: 401 LDGVLKMWRVTRPK 414
D LK+W V K
Sbjct: 434 SDSTLKVWDVKAQK 447
Score = 45 (20.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
LQGH H V +A +Y + A + QD
Sbjct: 283 LQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQD 317
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 140 (54.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T K V+++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G+I +W D P TG V + G K + +
Sbjct: 165 SPDGRKLASGCKNGQILLW----D-----------PSTGKQVGRTLAGHSKWITGLS-WE 208
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ N + S+S D ++++W +C + H++ + L DG+LYSAS D T
Sbjct: 209 PLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT 268
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 269 IKVWRAH 275
Score = 106 (42.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 427 RLLVSGSSDSTLKVW 441
Score = 103 (41.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 257 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA 472
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 473 SGGKDKCLRIWRR 485
Score = 78 (32.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + LA+ L
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLAMDL 452
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 453 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 64 (27.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 142 HD 143
D
Sbjct: 297 TD 298
Score = 49 (22.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 342 VISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
V S S D + ++W DGR LA L GH + IA+ + D + +GS
Sbjct: 387 VASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW-------SADSRLLV-SGS 433
Query: 401 LDGVLKMWRVTRPK 414
D LK+W V K
Sbjct: 434 SDSTLKVWDVKAQK 447
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + L + GH+ I + F ++ + + S
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKP--LTRMTGHQALINQVL-----FSPDSR----IVASASF 392
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 393 DKSIKLW 399
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
LQGH H V +A +Y + A + QD
Sbjct: 283 LQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQD 317
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 144 (55.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 48/187 (25%), Positives = 81/187 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T K V+++
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 166
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G+I +W D P TG V + G K + +
Sbjct: 167 SPDGKKLASGCKNGQILLW----D-----------PSTGTQVGRTLTGHSKWITGLS-WE 210
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ +N + S+S D +++VW +C + H++ + L DG+LYSAS D T
Sbjct: 211 PLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT 270
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 271 IKVWRAH 277
Score = 106 (42.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 369 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 428
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 429 RLLVSGSSDSTLKVW 443
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 415 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA 474
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 475 SGGKDKCLRIWRR 487
Score = 103 (41.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 259 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 303
Score = 73 (30.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + L L
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLTTDL 454
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 455 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 64 (27.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 239 RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 298
Query: 142 HD 143
D
Sbjct: 299 TD 300
Score = 52 (23.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + LA + GH+ I + F ++ + + S
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVL-----FSPDSR----IVASASF 394
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 395 DKSIKLW 401
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 342 VISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
V S S D + ++W DGR LA L GH + IA+ + D + +GS
Sbjct: 389 VASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW-------SADSRLLV-SGS 435
Query: 401 LDGVLKMWRVTRPK 414
D LK+W V K
Sbjct: 436 SDSTLKVWDVKAQK 449
Score = 45 (20.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
LQGH H V +A +Y + A + QD
Sbjct: 285 LQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQD 319
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 138 (53.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 83 RCISSVLKKDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
RC SS+ ++ +A G ++ +GS +R W T + V+++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 164
Query: 141 SHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198
S D A G +G+I +W D P TG V + G K + +
Sbjct: 165 SPDGKKLASGCKNGQILLW----D-----------PSTGKQVGRALAGHSKWITALS-WE 208
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
+ N + S+S D +++VW +C + H++ + L DG+LYSAS D T
Sbjct: 209 PLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT 268
Query: 259 VRVWRRY 265
++VWR +
Sbjct: 269 IKVWRAH 275
Score = 107 (42.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADD 247
+M H I + + + SAS DK+IK+W R K + +++ H + + AD
Sbjct: 367 RMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 248 GVLYSASDDATVRVW 262
+L S S D+T++VW
Sbjct: 427 RLLVSGSSDSTLKVW 441
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+ + IA + L S S D T+KVW ++ K + H++ + A+ + DG +
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA 472
Query: 252 SASDDATVRVWRR 264
S D +R+WRR
Sbjct: 473 SGGKDKCLRIWRR 485
Score = 103 (41.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
D LYSAS D+TIKVWR D T+Q H +N + ++ D L
Sbjct: 257 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 77 (32.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W +Y +L+GH AV +A A+ ++SGS+DST +VW D + LA L
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW----DVKAQKLAADL 452
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH + + + + + +G D L++WR
Sbjct: 453 PGHADEV---------YAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 64 (27.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 83 RCISSVLKKDGQILCIAVG-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC + + C+ G +G +Y+ S I++W+ + C L+ V M +S
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 142 HD 143
D
Sbjct: 297 TD 298
Score = 53 (23.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++SGS D T +W+ +D + LA + GH+ I + F ++ I + S
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVL-----FSPDSR----IIASASF 392
Query: 402 DGVLKMW 408
D +K+W
Sbjct: 393 DKSIKLW 399
Score = 50 (22.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 30/104 (28%), Positives = 46/104 (44%)
Query: 325 LQGHTHAV-MCLASVANYVI-SGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAF 381
+ GH + L S + +I S S D + ++W DGR LA L GH + IA+
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLW----DGRTGKYLASLRGHVAAVY-QIAW 422
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC---GHLNK 422
+ D + +GS D LK+W V K + GH ++
Sbjct: 423 -------SADSRLLV-SGSSDSTLKVWDVKAQKLAADLPGHADE 458
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTM 364
LQGH H V +A +Y + A + QD R ++
Sbjct: 283 LQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 322
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 130 (50.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 46/188 (24%), Positives = 79/188 (42%)
Query: 167 HVKLATI-PKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD 225
H + ++ KT RN + KH +T + V + L S D+ ++VW +
Sbjct: 391 HTNIVSVNDKTSTRYRNHNLSSTHTFKHQSCVT--CLQVYGNILMSGGSDRVVRVWDLNT 448
Query: 226 SKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSP 285
S+ I+ + H+E I AL + VL + SDD TVRVW S+N + I TL
Sbjct: 449 SQPIQILSGHNEGIRALQF-NGNVLVTGSDDTTVRVWD--LRSKN---SNISTLRGHNGS 502
Query: 286 VKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISG 345
V+ + +W+ + S Q + L ++ CL + ++ G
Sbjct: 503 VRCLQWDGTTLITGSNDQS--VRWWNLNYDSDQSK---ELFSFNSSISCLQFTNSILMCG 557
Query: 346 SADSTSRV 353
+DS ++
Sbjct: 558 LSDSKVQI 565
Score = 122 (48.0 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
++ H G + A+++ D+ +Y+ S DKT KVW + KC T+ H PI L V ++ +
Sbjct: 229 LIGHTGTVW--ALHLDDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDV-NNNI 285
Query: 250 LYSASDDATVRVW 262
+ + S D ++R+W
Sbjct: 286 MATGSLDNSIRIW 298
Score = 96 (38.9 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH + L N +++GS D+T RVW + +++ ++ L GH G +RC + + G
Sbjct: 455 LSGHNEGIRALQFNGNVLVTGSDDTTVRVW--DLRSKNSNISTLRGHNGSVRC-LQWDGT 511
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRV 410
T+ TGS D ++ W +
Sbjct: 512 ----------TLITGSNDQSVRWWNL 527
Score = 91 (37.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRL--KAKTSMVVAMEVSHDRVYAAYGDG 152
I C+ V N + TGS N IRIW + G L +A V ++ D++ + D
Sbjct: 276 IQCLDVNNNIMATGSLDNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIGDQIISGSSDS 335
Query: 153 KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPI----TSIA-INVSDD 207
++VW + + + IP T + +D +M + TS+ IN D
Sbjct: 336 TVKVWNIA---EIINDSIE-IPDTEEEEEEAL--QDNVMNDPFAVNNSFTSLPDINEPDH 389
Query: 208 T---LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
+ S + DKT +R + T + H + L V + +L S D VRVW
Sbjct: 390 VHTNIVSVN-DKTSTRYRNHNLSSTHTFK-HQSCVTCLQVYGN-ILMSGGSDRVVRVW 444
Score = 82 (33.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 28/98 (28%), Positives = 40/98 (40%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H V CL N ++SG +D RVW + +L GH IR A+ F G
Sbjct: 418 HQSCVTCLQVYGNILMSGGSDRVVRVWDLNTS---QPIQILSGHNEGIR-ALQFNGN--- 470
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNG 425
+ TGS D +++W + S+ L NG
Sbjct: 471 -------VLVTGSDDTTVRVWDLRSKNSNISTLRGHNG 501
Score = 58 (25.5 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
L+GH +V CL +I+GS D + R W D
Sbjct: 496 LRGHNGSVRCLQWDGTTLITGSNDQSVRWWNLNYD 530
Score = 57 (25.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 117 WKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVW 157
WK F E L T V A+ + +RVY D +VW
Sbjct: 219 WKGDRFKEA-HLIGHTGTVWALHLDDERVYTGSFDKTAKVW 258
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 121 (47.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY- 251
H G + S++++ + S + D T K+W +R KC++T H INA+ +G+ +
Sbjct: 190 HNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFG 249
Query: 252 SASDDATVRVW 262
+ SDDA+ R++
Sbjct: 250 TGSDDASCRLF 260
Score = 70 (29.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 325 LQGHTHA-VMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377
L +TH ++C + SV ++ +G D T VW + R +L+ L GH + C
Sbjct: 268 LMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGER--VLS-LTGHGNRVSC 324
Query: 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
G T+ +CTGS D +LK+W
Sbjct: 325 -------LGVPTDG--MALCTGSWDSLLKIW 346
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHDRVY--AAYGDGKIRVWRSTWDNGVKHVKL 170
LK + + AM + D V+ +A DGK+ VW N V + L
Sbjct: 58 LKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPL 102
Score = 51 (23.0 bits), Expect = 9.7e-08, Sum P(3) = 9.7e-08
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 324 ALQGHTHAVMCLASVAN--YVISGSADSTSRVWA 355
+L GH + V CL + + +GS DS ++WA
Sbjct: 314 SLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIWA 347
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L + G++ +
Sbjct: 264 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCN-GLMVT 320
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 321 CSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 371
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 372 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 428
Query: 373 GPIRC 377
+RC
Sbjct: 429 ELVRC 433
Score = 112 (44.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 427
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 428 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 453
Score = 103 (41.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D +IK+W + +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 289
Query: 262 WRRYFYSENQLHTLI 276
W S L+TLI
Sbjct: 290 WD--VSSGEVLNTLI 302
Score = 75 (31.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 344 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 399
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 400 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 428
Score = 68 (29.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 228 VYCLQYDDDKIISGLRDNSIKIWDKQSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 286
Query: 154 IRVW 157
+RVW
Sbjct: 287 VRVW 290
Score = 68 (29.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 16/74 (21%), Positives = 27/74 (36%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + +
Sbjct: 257 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG 316
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 317 LMVTCSKDRSIAVW 330
Score = 60 (26.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 298 LNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFD 357
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 358 DKYIVSASGDRTIKVWSTS 376
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 150 (57.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 55/187 (29%), Positives = 79/187 (42%)
Query: 83 RCISSVLKKDGQILCIAVG---NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
R S++ ILC A + + TG+ N RIW T LK + V+ +
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 140 VSHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMG-- 195
S D A G D IR+W D PK+G + + + G K + +
Sbjct: 194 WSPDGEVIATGSMDNTIRLW----D-----------PKSGQCLGDALRGHSKWITSLSWE 238
Query: 196 PITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASD 255
PI + S L S+S D TIK+W C T+ H+ ++ + G+LYS S
Sbjct: 239 PIHLVKPG-SKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSH 297
Query: 256 DATVRVW 262
D TVRVW
Sbjct: 298 DRTVRVW 304
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 43/169 (25%), Positives = 79/169 (46%)
Query: 95 ILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTEC-G-RLKAKTSMVVAMEVSHDRVYAAYG 150
+LC++ +G I TGS N IR+W P+ +C G L+ + + ++ S + ++
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLW-DPKSGQCLGDALRGHSKWITSL--SWEPIHLVKP 245
Query: 151 DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY 210
K R+ S+ D +K T+ + V + M H ++ + LY
Sbjct: 246 GSKPRLASSSKDGTIKIWD--TVSR---------VCQYTMSGHTNSVSCVKWG-GQGLLY 293
Query: 211 SASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVADDGVLYSASDDAT 258
S S D+T++VW I +CI +++H+ +N L ++ D L + D T
Sbjct: 294 SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHT 342
Score = 59 (25.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAV-L 368
K W ++ +GH +V +A S ++S S D+T +VW D R L+V L
Sbjct: 427 KLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW----DVRTRKLSVDL 482
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
GH+ + + + + +C+G D ++++W
Sbjct: 483 PGHKDEV---------YTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 52 (23.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
+ GH V + + Y++S S D++ ++W +DG+ ++ GH +A +
Sbjct: 398 MTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDG-RDGK--FISTFRGH-------VASV 447
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416
+ ++ C S D LK+W V K S
Sbjct: 448 YQVAWSSDCRLLVSC--SKDTTLKVWDVRTRKLS 479
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 144 (55.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 230 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 286
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 287 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 337
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 338 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 394
Query: 373 GPIRC 377
+RC
Sbjct: 395 ELVRC 399
Score = 112 (44.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 337 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 393
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 394 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 419
Score = 99 (39.9 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 197 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 255
Query: 262 W 262
W
Sbjct: 256 W 256
Score = 80 (33.2 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 270 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 322
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 323 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 354
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 310 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 365
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 366 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 394
Score = 71 (30.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 223 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 282
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 283 LMVTCSKDRSIAVW 296
Score = 68 (29.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 194 VYCLQYDDDKIISGLRDNSIKIWDKSSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 252
Query: 154 IRVW 157
+RVW
Sbjct: 253 VRVW 256
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 264 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 323
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 324 DKYIVSASGDRTIKVWSTS 342
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 117 (46.2 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S++++ T S + D + K+W IRD C +T H INA+ G ++
Sbjct: 183 HTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFA 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 77 (32.2 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 28/90 (31%), Positives = 37/90 (41%)
Query: 324 ALQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378
A+ H + + + SVA + +G D VW R VL GH + C
Sbjct: 262 AMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVW---DSMRQERAGVLAGHDNRVSC- 317
Query: 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG TED +CTGS D LK+W
Sbjct: 318 ---LG----VTEDGMA-VCTGSWDSFLKIW 339
Score = 66 (28.3 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 47 (21.6 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM + D + +A DGK+ VW S N V + L
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPL 95
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 264 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 320
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 321 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 371
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 372 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 428
Query: 373 GPIRC 377
+RC
Sbjct: 429 ELVRC 433
Score = 112 (44.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 427
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 428 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 453
Score = 99 (39.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 289
Query: 262 W 262
W
Sbjct: 290 W 290
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 304 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 356
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 357 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 388
Score = 75 (31.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 344 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 399
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 400 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 428
Score = 71 (30.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 257 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 316
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 317 LMVTCSKDRSIAVW 330
Score = 68 (29.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 228 VYCLQYDDDKIISGLRDNSIKIWDKSSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 286
Query: 154 IRVW 157
+RVW
Sbjct: 287 VRVW 290
Score = 61 (26.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 298 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 357
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 358 DKYIVSASGDRTIKVWSTS 376
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 144 (55.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 279 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 335
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 336 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 386
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 443
Query: 373 GPIRC 377
+RC
Sbjct: 444 ELVRC 448
Score = 112 (44.5 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 442
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 443 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 468
Score = 99 (39.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ DD + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 246 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 304
Query: 262 W 262
W
Sbjct: 305 W 305
Score = 80 (33.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 319 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 371
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 372 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 403
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 359 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 414
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 415 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 443
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 332 LMVTCSKDRSIAVW 345
Score = 68 (29.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 243 VYCLQYDDDKIISGLRDNSIKIWDKSSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 301
Query: 154 IRVW 157
+RVW
Sbjct: 302 VRVW 305
Score = 61 (26.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 313 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 372
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 373 DKYIVSASGDRTIKVWSTS 391
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 146 (56.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 35/94 (37%), Positives = 53/94 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G +T A V LYS S+DKTIK+W + +CI T++ H+ + +L+ D L S
Sbjct: 257 HSGEVTCFA--VGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDK-CLIS 313
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPV 286
+S D T++VW YSEN + ++ T + S V
Sbjct: 314 SSLDGTIKVWA---YSENGILKVVQTRRQEQSSV 344
Score = 58 (25.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-LATIPKTGGAVRNLIVG 186
V AM +++ ++A G I VW++T D+ K L ++ G V VG
Sbjct: 215 VNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG 267
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 131 (51.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATV 259
+ + V + LYS S+DKTIKVW + + +CI+T+ HS + +L+ D +L S S D TV
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLL-SCSLDNTV 336
Query: 260 RVW 262
++W
Sbjct: 337 KIW 339
Score = 87 (35.7 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC----GRLKAKTSMVVAMEVSHDRVYAA 148
GQ+ + VG ++ G+ I W+ T C L T VV + V +R+Y+
Sbjct: 231 GQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSG 290
Query: 149 YGDGKIRVW 157
D I+VW
Sbjct: 291 SMDKTIKVW 299
Score = 75 (31.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
+C + VLK G+I C+ ++ G N+++ W E L V ++ V
Sbjct: 184 QC-TGVLKLGGEIGCVLSEGPWLLVGMP-NLVKAWNI-ETNADQSLSGPVGQVYSLVVGT 240
Query: 143 DRVYAAYGDGKIRVWR 158
D ++A DG I WR
Sbjct: 241 DLLFAGTQDGSILAWR 256
Score = 72 (30.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP--INALVVADDG----VLYSASDDATV 259
D L S SLD T+K+W + +E H E + AL D VL A +D T+
Sbjct: 324 DQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTL 383
Query: 260 RVW 262
R++
Sbjct: 384 RLY 386
Score = 48 (22.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIW 117
+ + G+ +YTGS +R+W
Sbjct: 157 IALPSGSDKLYTGSKDETLRVW 178
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L + G++ +
Sbjct: 264 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCN-GLMVT 320
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 321 CSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 371
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 372 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 428
Query: 373 GPIRC 377
+RC
Sbjct: 429 ELVRC 433
Score = 112 (44.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 427
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 428 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 453
Score = 97 (39.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W + +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 231 LQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY-DERVIVTGSSDSTVRV 289
Query: 262 WRRYFYSENQLHTLI 276
W S L+TLI
Sbjct: 290 WD--VNSGEVLNTLI 302
Score = 75 (31.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 344 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 399
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 400 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 428
Score = 67 (28.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + + EC + L T V+ ++ + D
Sbjct: 228 VYCLQYDDEKIISGLRDNSIKIWDK-QTLECLKILTGHTGSVLCLQYDERVIVTGSSDST 286
Query: 154 IRVW 157
+RVW
Sbjct: 287 VRVW 290
Score = 67 (28.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 16/74 (21%), Positives = 27/74 (36%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + +
Sbjct: 257 CLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG 316
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 317 LMVTCSKDRSIAVW 330
Score = 58 (25.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 298 LNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFD 357
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 358 DKYIVSASGDRTIKVWSTS 376
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 113 (44.8 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 180 VRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLDKTIKVWRIRDS------KCIETI 232
V L VG ++ H G +TSIA++ + DT+ S+S DKT+ VW++ + K ++
Sbjct: 9 VTYLEVGS--LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL 66
Query: 233 QAHSEPINALVVADDGVL-YSASDDATVRVW 262
+ HS + +V++ DG S S D T+R+W
Sbjct: 67 KGHSHFVQDVVISHDGQFALSGSWDNTLRLW 97
Score = 89 (36.4 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 326 QGHTHAVMCLA-SVAN-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
+GHT VM +A S N +ISGS D+T +VW + + T+ H+ + C
Sbjct: 109 KGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGP-EAHQDWVSCI----- 162
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH 419
RF T TI +GS D +K+W + K C H
Sbjct: 163 RFSPNTP----TIVSGSWDNKVKIWDIKSFK--CNH 192
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 152 (58.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 52/185 (28%), Positives = 82/185 (44%)
Query: 83 RCISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
RC SS+ +L A G GF+ G D+ V RIW T LK T+ V+ +
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTV-RIWDIYTSTPTHTLKGHTNWVLQVA 189
Query: 140 VSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPI 197
S D ++ A +G IR+W P+TG + + + G K + +
Sbjct: 190 WSPDSKKIATAGMEGDIRIW---------------CPQTGKQLGSTLKGHTKFITGLS-W 233
Query: 198 TSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDA 257
+N L S+S D TI++W K + ++ H+ + L +G++YS S D
Sbjct: 234 EPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDR 293
Query: 258 TVRVW 262
TVRV+
Sbjct: 294 TVRVF 298
Score = 52 (23.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 22/92 (23%), Positives = 38/92 (41%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + + + Y S S D + ++W Q G+ L GH G + + +
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDG-QSGK--FLGNFRGHVGAVY-QVCW- 444
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414
++ Y + +GS D LK+W + K
Sbjct: 445 -----SSDSRY--LVSGSKDSTLKIWDIKTKK 469
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 144 (55.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 247 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 303
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 304 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 354
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 355 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 411
Query: 373 GPIRC 377
+RC
Sbjct: 412 ELVRC 416
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 354 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 410
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 411 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 436
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 272
Query: 262 W 262
W
Sbjct: 273 W 273
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 287 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 339
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 340 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 371
Score = 75 (31.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 327 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 382
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 383 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 411
Score = 71 (30.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 240 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 300 LMVTCSKDRSIAVW 313
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 211 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 269
Query: 154 IRVW 157
+RVW
Sbjct: 270 VRVW 273
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 281 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 340
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 341 DKYIVSASGDRTIKVWSTS 359
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 211 VYCLQYDDEKIISGLRDNSIKIWDKT 236
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 144 (55.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 247 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 303
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 304 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 354
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 355 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 411
Query: 373 GPIRC 377
+RC
Sbjct: 412 ELVRC 416
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 354 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 410
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 411 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 436
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 214 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 272
Query: 262 W 262
W
Sbjct: 273 W 273
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 287 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 339
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 340 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 371
Score = 75 (31.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 327 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 382
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 383 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 411
Score = 71 (30.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 240 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 300 LMVTCSKDRSIAVW 313
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 211 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 269
Query: 154 IRVW 157
+RVW
Sbjct: 270 VRVW 273
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 281 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 340
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 341 DKYIVSASGDRTIKVWSTS 359
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 211 VYCLQYDDEKIISGLRDNSIKIWDKT 236
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 147 (56.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 389 KGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQ 448
Query: 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXX 305
+ LYS S D T+ VW + Q + T+ A +PV
Sbjct: 449 GNK-LYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSLK 498
Query: 306 XIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
I W +L+ L G H V L + NY+ SGS T ++W
Sbjct: 499 AIKVWDI--VGTELKLKKELTGLNHWVRALVASQNYLYSGSYQ-TIKIW 544
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 193 HMGPITSIA-INVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
H+G + ++A I+ D T ++SAS D++++VW + + C +T+ H + AL V+ G L
Sbjct: 598 HVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR-GRL 656
Query: 251 YSASDDATVRVW 262
+S + D+TV+VW
Sbjct: 657 FSGAVDSTVKVW 668
Score = 83 (34.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 82 YRCISSVLKKDGQILCIAVGN-G-FIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + G +++GS I++W +C + L+ +V+A+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 445
Query: 139 EVSHDRVYAAYGDGKIRVW 157
+ +++Y+ D I VW
Sbjct: 446 CIQGNKLYSGSADCTIIVW 464
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 143 (55.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 252 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 308
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 309 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 359
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 360 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 416
Query: 373 GPIRC 377
+RC
Sbjct: 417 ELVRC 421
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 359 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 415
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 416 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 441
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 219 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 277
Query: 262 W 262
W
Sbjct: 278 W 278
Score = 81 (33.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 292 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 344
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 345 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 376
Score = 75 (31.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 332 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 387
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 388 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 416
Score = 71 (30.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 245 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 304
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 305 LMVTCSKDRSIAVW 318
Score = 67 (28.6 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 216 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 274
Query: 154 IRVW 157
+RVW
Sbjct: 275 VRVW 278
Score = 59 (25.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 286 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 345
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 346 DKYIVSASGDRTIKVWSTS 364
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 216 VYCLQYDDEKIISGLRDNSIKIWDKT 241
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 144 (55.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 266 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 322
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 323 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 373
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 374 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 430
Query: 373 GPIRC 377
+RC
Sbjct: 431 ELVRC 435
Score = 112 (44.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 373 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 429
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 430 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 455
Score = 95 (38.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 233 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 291
Query: 262 W 262
W
Sbjct: 292 W 292
Score = 80 (33.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 306 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 358
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 359 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 390
Score = 75 (31.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 346 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 401
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 402 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 430
Score = 71 (30.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 259 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 318
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 319 LMVTCSKDRSIAVW 332
Score = 67 (28.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 230 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 288
Query: 154 IRVW 157
+RVW
Sbjct: 289 VRVW 292
Score = 61 (26.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 300 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 359
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 360 DKYIVSASGDRTIKVWSTS 378
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 230 VYCLQYDDEKIISGLRDNSIKIWDKT 255
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 144 (55.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 267 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 323
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 324 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 374
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 375 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 431
Query: 373 GPIRC 377
+RC
Sbjct: 432 ELVRC 436
Score = 112 (44.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 374 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 430
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 431 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 456
Score = 95 (38.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 234 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 292
Query: 262 W 262
W
Sbjct: 293 W 293
Score = 80 (33.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 307 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 359
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 360 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 391
Score = 75 (31.5 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 347 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 402
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 403 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 431
Score = 71 (30.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 260 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 319
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 320 LMVTCSKDRSIAVW 333
Score = 67 (28.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 231 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 289
Query: 154 IRVW 157
+RVW
Sbjct: 290 VRVW 293
Score = 61 (26.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 301 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 360
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 361 DKYIVSASGDRTIKVWSTS 379
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 231 VYCLQYDDEKIISGLRDNSIKIWDKT 256
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/168 (31%), Positives = 78/168 (46%)
Query: 98 IAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAM-EVSHDRVYAAYGDGK--I 154
+AVG GF+++ S I IW +F+ K V+A+ + GDG I
Sbjct: 530 LAVGGGFLFSSSYDRTILIWSLKDFSHVHTFKGHQDKVMALIHIEGTEPVCVSGDGGGGI 589
Query: 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL 214
VW ST T P +R KD ++ G I ++A + +Y+ S
Sbjct: 590 FVW-ST-----------TFPLEEQPLRKWYEPKD--WRYTG-IHALAYSEYGH-VYTGSG 633
Query: 215 DKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
D TIK W ++D + T+ H ++ LVV + GVLYS S D TVR+W
Sbjct: 634 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN-GVLYSGSWDGTVRLW 680
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 57/231 (24%), Positives = 92/231 (39%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD 246
KD M H +T +A V L+S+S D+TI +W ++D + T + H + + AL+ +
Sbjct: 518 KD-MRGHQDSVTGLA--VGGGFLFSSSYDRTILIWSLKDFSHVHTFKGHQDKVMALIHIE 574
Query: 247 --DGVLYSASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKXXXXXXXXXXXXXXXX 303
+ V S + VW F E Q L +Y+ +
Sbjct: 575 GTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYSEYGHVYTGSGD 634
Query: 304 XXXIHYWHKGWFSAQLQYGGAL---QGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360
K W LQ G L GH V L V + SGS D T R+W+ +
Sbjct: 635 NTI-----KAW---SLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDN- 685
Query: 361 RHTMLAVLVGHRGP--IRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
++L VL G P +R ++ +D+ T+ +G +++WR
Sbjct: 686 --SLLTVL-GEETPGIVRSILSLA------ADDQ--TLVAAYQNGDIQIWR 725
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 144 (55.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 279 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 335
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 336 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 386
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 443
Query: 373 GPIRC 377
+RC
Sbjct: 444 ELVRC 448
Score = 112 (44.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 442
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 443 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 468
Score = 95 (38.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 304
Query: 262 W 262
W
Sbjct: 305 W 305
Score = 80 (33.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 319 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 371
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 372 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 403
Score = 75 (31.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 359 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 414
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 415 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 443
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 332 LMVTCSKDRSIAVW 345
Score = 67 (28.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 301
Query: 154 IRVW 157
+RVW
Sbjct: 302 VRVW 305
Score = 61 (26.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 313 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 372
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 373 DKYIVSASGDRTIKVWSTS 391
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKT 268
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 144 (55.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H+E + L ++ G++ +
Sbjct: 279 HTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMVT 335
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 336 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 386
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 443
Query: 373 GPIRC 377
+RC
Sbjct: 444 ELVRC 448
Score = 112 (44.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 442
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 443 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 468
Score = 95 (38.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TVRV
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVRV 304
Query: 262 W 262
W
Sbjct: 305 W 305
Score = 80 (33.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 319 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDF------ 371
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 372 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 403
Score = 75 (31.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GH AV + Y++S S D T +VW+ + L GH+ I C + + R
Sbjct: 359 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC---EFVRTLNGHKRGIAC-LQYRDR 414
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGH-LNKTNGHE 427
+ +GS D +++W + CG L GHE
Sbjct: 415 L----------VVSGSSDNTIRLWDI-----ECGACLRVLEGHE 443
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143
C+ + G +LC+ I TGS + +R+W L V+ + S+
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 144 RVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 332 LMVTCSKDRSIAVW 345
Score = 67 (28.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 301
Query: 154 IRVW 157
+RVW
Sbjct: 302 VRVW 305
Score = 61 (26.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 313 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD 372
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 373 DKYIVSASGDRTIKVWSTS 391
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKT 268
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 125 (49.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 139 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 198
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 199 TGSDDATCRLF 209
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 219 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 273
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 274 --LG-----VTDDGMAVATGSWDSFLKIW 295
Score = 58 (25.5 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 253 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 7 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 51
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/190 (27%), Positives = 87/190 (45%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K+++ H + + N + + S S D+TI++W ++ KC+ I+AHS PI+++ D
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ SAS D + ++W L TLI + S K
Sbjct: 182 GSLIVSASHDGSCKIWDAK--EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLAS---VAN--YVISGSADSTSRVWAREQDGR 361
+Y G F L+ GHT+ V C+ S V N Y++SGS D+ +W + R
Sbjct: 240 SNY-ATGKF---LK---VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW--DLQAR 290
Query: 362 HTMLAVLVGH 371
+ +L L GH
Sbjct: 291 N-ILQRLEGH 299
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 60/249 (24%), Positives = 106/249 (42%)
Query: 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD 225
K +KL + +TG ++ LI G H + N + + S S D+T+++W +
Sbjct: 93 KTLKLWDV-ETGSLIKTLI-G------HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 226 SKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYS 284
KC++ + AHS+P+ A+ DG ++ S+S D R+W H + + +
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW-----DSGTGHCVKTLIDDENP 199
Query: 285 PVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS---VAN- 340
PV + W+ SA+ + GH +A C++S V N
Sbjct: 200 PVSFVRFSPNGKFILVGTLDNTLRLWNIS--SAK--FLKTYTGHVNAQYCISSAFSVTNG 255
Query: 341 -YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399
++SGS D+ +W E + + +L L GH + TE+ I +G
Sbjct: 256 KRIVSGSEDNCVHMW--ELNSKK-LLQKLEGHTETVMNVAC------HPTEN---LIASG 303
Query: 400 SLDGVLKMW 408
SLD +++W
Sbjct: 304 SLDKTVRIW 312
Score = 137 (53.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET-IQAHSEPINALVVADDG--V 249
H P+T++ N + S+S D ++W C++T I + P++ + + +G +
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFI 213
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
L D+ T+R+W S L T + A+Y + +H
Sbjct: 214 LVGTLDN-TLRLWN--ISSAKFLKTYTGHVNAQYC-ISSAFSVTNGKRIVSGSEDNCVHM 269
Query: 310 WHKGWFSAQLQYGGALQGHTHAVMCLAS--VANYVISGSADSTSRVWAREQD 359
W S +L L+GHT VM +A N + SGS D T R+W ++++
Sbjct: 270 WELN--SKKLLQ--KLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 90 (36.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + SAS DKT+K+W + I+T+ H+ + ++
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 252 SASDDATVRVW 262
S S D TVR+W
Sbjct: 130 SGSFDETVRIW 140
Score = 66 (28.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G + L+ P ++F+ RF + I G+L
Sbjct: 170 IVSSSYDGLCRIW---DSGTGHCVKTLIDDENP---PVSFV-RFSPNGK----FILVGTL 218
Query: 402 DGVLKMWRVTRPK---SSCGHLN 421
D L++W ++ K + GH+N
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVN 241
Score = 42 (19.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 14/75 (18%), Positives = 30/75 (40%)
Query: 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS--HDRVYAAYGDGKIRVWRSTW 161
FI + SD +++W + L T+ + + + + + D +R+W T
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 162 DNGVKHVKLATIPKT 176
+K + + P T
Sbjct: 145 GKCLKVLPAHSDPVT 159
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 118 (46.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + K H + S+ + +L +AS DKTIKVW + K + ++ H +
Sbjct: 93 VKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCA 152
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 153 RFSPDGRLIASASDDKTVKLW 173
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G + + S + +A DKT+KVW +R ++ ++ Q H+ +N+L G L
Sbjct: 186 EHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYL 245
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+AS+D+T+++ E +L + TL P + W
Sbjct: 246 ITASNDSTLKILDLL---EGRL---LYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Query: 311 HKGWFSAQLQYGGALQGH 328
K FSA Y G L+ H
Sbjct: 300 -KTNFSAA-DYDGVLKTH 315
Score = 98 (39.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDG 248
++ H + + + S + S S DKT+ +W + K T+ +AH+ + ++ + DG
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDG 116
Query: 249 V-LYSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
L +ASDD T++VW +++ +S +Q H + A++SP
Sbjct: 117 QSLVTASDDKTIKVWTVHRQKFLFSLSQ-H-INWVRCARFSP 156
Score = 81 (33.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +CI + H N + G
Sbjct: 142 LSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGT 201
Query: 250 -LYSASDDATVRVW 262
+ +A D TV+VW
Sbjct: 202 CIAAAGTDKTVKVW 215
Score = 79 (32.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q HT AV L+ NY+I+ S DST ++ +GR +L L GH+GP C +AF
Sbjct: 227 QVHTAAVNSLSFHPSGNYLITASNDSTLKILDL-LEGR--LLYTLHGHQGPATC-VAF-S 281
Query: 384 RFGE 387
R G+
Sbjct: 282 RTGD 285
Score = 54 (24.1 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 91 KDGQILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVY 146
KD ++C+ +G + +GS + +W E KA T+ V ++ S D +
Sbjct: 62 KDA-VMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLV 120
Query: 147 AAYGDGKIRVW 157
A D I+VW
Sbjct: 121 TASDDKTIKVW 131
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H +T + N L + S D TIK+W+I +C++T+ H++ + ALV D+ L S
Sbjct: 382 HSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF-DNQKLIS 438
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
D+T++VW Y Q I T V + WH
Sbjct: 439 GGLDSTIKVWN---YHTGQC---IATYRGHEDAV--VSVDFTNKSIVSGSADHTVRVWH- 489
Query: 313 GWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLV- 369
++ Y L+GHT V + + S +N + S S D+T R+W + + +
Sbjct: 490 --VDSRTCY--TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMEN 545
Query: 370 -GHRGPIRCAIAFLGRFGEET-EDE 392
GH G ++C I F + EE EDE
Sbjct: 546 NGHIGQVQCIIPFT--YKEELIEDE 568
Score = 90 (36.7 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 211 SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
+++LD TIK+W + KCI T H E + + + AD + S + D ++VW
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWS-IAADTFRIISGAHDRLIKVW 693
Score = 78 (32.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEV 140
+CI++ + ++ + N I +GS + +R+W T C L+ T V V +
Sbjct: 454 QCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRT-CYTLRGHTDWVNHVKIHS 512
Query: 141 SHDRVYAAYGDGKIRVW 157
+ + +++A D IR+W
Sbjct: 513 ASNTIFSASDDTTIRMW 529
Score = 46 (21.3 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 389 TEDEYCT-ICTGSLDGVLKMWRVTRPK---SSCGHL 420
T + Y T T +LD +K+W V K + GH+
Sbjct: 633 TPNSYPTHFLTSALDNTIKLWDVATGKCIRTQFGHI 668
Score = 38 (18.4 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 18 PTGTAPSTFLRSISTKEPSFSTFPYSPPRFSSPIS------LHTSPLSSP 61
P G + ST S+ST+ S YS S+ IS + T P SSP
Sbjct: 39 PQGLSTSTTTTSVSTRHHS-PDIVYSSHTKSTLISKAPSDFIQTQP-SSP 86
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 127 (49.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 357 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAII 415
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 416 NTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 453
Score = 96 (38.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H+G + IA+ + + S D+TIK+W + K ++ H + ++V+ L+
Sbjct: 202 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 261
Query: 252 SASDDATVRVW 262
S +D V+ W
Sbjct: 262 SCGEDKQVKCW 272
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 286 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII 345
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 346 TGSHDTTIRLW 356
Score = 75 (31.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 196 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 253 VSTRSPY--LFSCGEDKQVKCWDLEYNKVIRH 282
Score = 66 (28.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 325 LQGHTHAVM---CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
L GHT+AV C A+ +I+GS D+T R+W G+ + L H+ +R +
Sbjct: 325 LSGHTNAVATVRCQAAEPQ-IITGSHDTTIRLWDLVA-GKTRV--TLTNHKKSVRAVVL- 379
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
+ T +GS D + K W+
Sbjct: 380 --------HPRHYTFASGSPDNI-KQWK 398
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 127 (49.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 358 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAII 416
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 417 NTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 454
Score = 96 (38.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H+G + IA+ + + S D+TIK+W + K ++ H + ++V+ L+
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 252 SASDDATVRVW 262
S +D V+ W
Sbjct: 263 SCGEDKQVKCW 273
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 287 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII 346
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 347 TGSHDTTIRLW 357
Score = 75 (31.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 197 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 254 VSTRSPY--LFSCGEDKQVKCWDLEYNKVIRH 283
Score = 66 (28.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 325 LQGHTHAVM---CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
L GHT+AV C A+ +I+GS D+T R+W G+ + L H+ +R +
Sbjct: 326 LSGHTNAVATVRCQAAEPQ-IITGSHDTTIRLWDLVA-GKTRV--TLTNHKKSVRAVVL- 380
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
+ T +GS D + K W+
Sbjct: 381 --------HPRHYTFASGSPDNI-KQWK 399
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 127 (49.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 359 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAII 417
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 418 NTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 455
Score = 96 (38.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H+G + IA+ + + S D+TIK+W + K ++ H + ++V+ L+
Sbjct: 204 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 263
Query: 252 SASDDATVRVW 262
S +D V+ W
Sbjct: 264 SCGEDKQVKCW 274
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 288 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII 347
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 348 TGSHDTTIRLW 358
Score = 75 (31.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 198 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 254
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 255 VSTRSPY--LFSCGEDKQVKCWDLEYNKVIRH 284
Score = 66 (28.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 325 LQGHTHAVM---CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
L GHT+AV C A+ +I+GS D+T R+W G+ + L H+ +R +
Sbjct: 327 LSGHTNAVATVRCQAAEPQ-IITGSHDTTIRLWDLVA-GKTRV--TLTNHKKSVRAVVL- 381
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
+ T +GS D + K W+
Sbjct: 382 --------HPRHYTFASGSPDNI-KQWK 400
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/197 (22%), Positives = 83/197 (42%)
Query: 181 RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240
+N + K + H G + + + + + + S D T++VW + + + T+ H E +
Sbjct: 289 KNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 346
Query: 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXX 300
L ++G++ + S D ++ VW ++ L +++ A + V
Sbjct: 347 HLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 405
Query: 301 XXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360
K W ++ ++ L GH + CL V+SGS+D+T R+W E
Sbjct: 406 TI---------KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 456
Query: 361 RHTMLAVLVGHRGPIRC 377
L VL GH +RC
Sbjct: 457 ---CLRVLEGHEELVRC 470
Score = 113 (44.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 408 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 464
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 465 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLVAALDPRAPAGTL 505
Score = 91 (37.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 268 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 326
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 327 WD--VNTGEMLNTLI 339
Score = 80 (33.2 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 341 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 393
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 394 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 425
Score = 72 (30.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 265 VYCLQYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 323
Query: 154 IRVW 157
+RVW
Sbjct: 324 VRVW 327
Score = 63 (27.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 303 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 362
Query: 153 KIRVW 157
I VW
Sbjct: 363 SIAVW 367
Score = 57 (25.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 345 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 404
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 405 RTIKVWNTS 413
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 125 (49.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 63 (27.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLKIW 339
Score = 58 (25.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 125 (49.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 63 (27.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLKIW 339
Score = 58 (25.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 125 (49.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 63 (27.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLKIW 339
Score = 58 (25.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 125 (49.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 63 (27.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLKIW 339
Score = 58 (25.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 125 (49.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 63 (27.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLKIW 339
Score = 58 (25.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/197 (22%), Positives = 83/197 (42%)
Query: 181 RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240
+N + K + H G + + + + + + S D T++VW + + + T+ H E +
Sbjct: 330 KNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 387
Query: 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXX 300
L ++G++ + S D ++ VW ++ L +++ A + V
Sbjct: 388 HLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 446
Query: 301 XXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360
K W ++ ++ L GH + CL V+SGS+D+T R+W E
Sbjct: 447 TI---------KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 497
Query: 361 RHTMLAVLVGHRGPIRC 377
L VL GH +RC
Sbjct: 498 ---CLRVLEGHEELVRC 511
Score = 113 (44.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 449 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 505
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 506 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLVAALDPRAPAGTL 546
Score = 91 (37.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 367
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 368 WD--VNTGEMLNTLI 380
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 434
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 435 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 466
Score = 72 (30.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 364
Query: 154 IRVW 157
+RVW
Sbjct: 365 VRVW 368
Score = 63 (27.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 344 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 153 KIRVW 157
I VW
Sbjct: 404 SIAVW 408
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 446 RTIKVWNTS 454
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/197 (22%), Positives = 83/197 (42%)
Query: 181 RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240
+N + K + H G + + + + + + S D T++VW + + + T+ H E +
Sbjct: 330 KNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVL 387
Query: 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXX 300
L ++G++ + S D ++ VW ++ L +++ A + V
Sbjct: 388 HLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 446
Query: 301 XXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360
K W ++ ++ L GH + CL V+SGS+D+T R+W E
Sbjct: 447 TI---------KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 497
Query: 361 RHTMLAVLVGHRGPIRC 377
L VL GH +RC
Sbjct: 498 ---CLRVLEGHEELVRC 511
Score = 113 (44.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 449 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 505
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 506 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLVAALDPRAPAGTL 546
Score = 91 (37.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 367
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 368 WD--VNAGEMLNTLI 380
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 434
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 435 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 466
Score = 72 (30.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 364
Query: 154 IRVW 157
+RVW
Sbjct: 365 VRVW 368
Score = 63 (27.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 344 GSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 153 KIRVW 157
I VW
Sbjct: 404 SIAVW 408
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 446 RTIKVWNTS 454
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 121 (47.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDG-VL 250
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG +L
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLL 118
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +R+ +S Q H + AK+SP
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQ-H-INWVRCAKFSP 155
Score = 110 (43.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW R + ++ Q HS +NAL G L
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYL 244
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 245 ITASSDSTLKI 255
Score = 102 (41.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ L +AS DKT+KVW + + ++ H +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCA 151
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 152 KFSPDGRLIVSASDDKTVKLW 172
Score = 74 (31.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ AV L+ NY+I+ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 226 QLHSAAVNALSFHPSGNYLITASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAF-S 280
Query: 384 RFGE 387
R GE
Sbjct: 281 RTGE 284
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDR--VY 146
KD + C+ +G + +GS +RIW E +A T+ V ++ D +
Sbjct: 61 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLV 119
Query: 147 AAYGDGKIRVW 157
A D ++VW
Sbjct: 120 TASDDKTVKVW 130
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 243 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVT 299
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 300 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 350
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 407
Query: 373 GPIRC 377
+RC
Sbjct: 408 ELVRC 412
Score = 112 (44.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 350 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 406
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 407 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLIAALDPRAPAGTL 447
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 268
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 269 WD--VNTGEMLNTLI 281
Score = 80 (33.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 283 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 335
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 336 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 367
Score = 73 (30.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 207 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 265
Query: 154 IRVW 157
+RVW
Sbjct: 266 VRVW 269
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 245 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 304
Query: 153 KIRVW 157
I VW
Sbjct: 305 SIAVW 309
Score = 57 (25.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 287 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 346
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 347 RTIKVWNTS 355
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 243 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF-NNGMMVT 299
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 300 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 350
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 407
Query: 373 GPIRC 377
+RC
Sbjct: 408 ELVRC 412
Score = 112 (44.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 350 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 406
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 407 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLMAALDPRAPAGTL 447
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 268
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 269 WD--VNAGEMLNTLI 281
Score = 80 (33.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 283 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 335
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 336 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 367
Score = 73 (30.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 207 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 265
Query: 154 IRVW 157
+RVW
Sbjct: 266 VRVW 269
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 245 GSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 304
Query: 153 KIRVW 157
I VW
Sbjct: 305 SIAVW 309
Score = 57 (25.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 287 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 346
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 347 RTIKVWNTS 355
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 64/262 (24%), Positives = 114/262 (43%)
Query: 107 TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIRVWRSTWDNG 164
+GS+ I++W L+ +S V ++ S + A G D I++W S D+
Sbjct: 58 SGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDS- 116
Query: 165 VKHV------KLATIP-KTGGAVRNLIVG--KDKMMKHMGPITSIAINVSDDTLYSASLD 215
+KH ++ ++ G + N +G K + H + S+A + L S S +
Sbjct: 117 LKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAE 176
Query: 216 KTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHT 274
KTIK+W T+ HS + LV + DG +L S S+DAT+++W + +
Sbjct: 177 KTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW------DPPSGS 230
Query: 275 LILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMC 334
L TL + ++ I K W +A + L+GH+ V+
Sbjct: 231 LKHTLEGHSNKIESLAFSPNGQLLASGSSDATI----KLWDTATGSFRHTLKGHSDMVLS 286
Query: 335 LA-SVANYVI-SGSADSTSRVW 354
+ S + ++ SGS D+T ++W
Sbjct: 287 VVFSPDSQLLESGSGDNTIKLW 308
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 125 (49.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 83 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 142
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 143 TGSDDATCRLF 153
Score = 63 (27.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 23/89 (25%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
+ H + + + SVA +++G D +W + R VL GH + C
Sbjct: 163 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR---AGVLAGHDNRVSC-- 217
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D LK+W
Sbjct: 218 --LG-----VTDDGMAVATGSWDSFLKIW 239
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 197 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 126 (49.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 360 DLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAII 418
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 419 NTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 456
Score = 98 (39.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H+G + IA+ + + S D+TIK+W + K ++ H + ++V A L+
Sbjct: 205 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLF 264
Query: 252 SASDDATVRVW 262
S +D V+ W
Sbjct: 265 SCGEDKQVKCW 275
Score = 93 (37.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 289 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVV 348
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 349 TGSHDTTIRLW 359
Score = 75 (31.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 199 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 255
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 256 VSARSPY--LFSCGEDKQVKCWDLEYNKVIRH 285
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 325 LQGHTHAVM---CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
L GHT+AV C A+ V++GS D+T R+W G+ + L H+ +R I
Sbjct: 328 LSGHTNAVATVKCQAAEPQ-VVTGSHDTTIRLWDLVA-GKTRV--TLTNHKKSVRAVIL- 382
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
+ T +GS D + K W+
Sbjct: 383 --------HPRHYTFASGSPDNI-KQWK 401
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 152 (58.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 60/245 (24%), Positives = 99/245 (40%)
Query: 121 EFTECGRLKA-----KTSMVVAM-EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIP 174
+F+ CG+ KT + M ++S +R + K+ V W K + A+
Sbjct: 86 KFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGH---KLGVNDFAWSADSKSIVTASDD 142
Query: 175 KTGGAVRNLIVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ 233
KT V K +K H + N + S S D+++++W +R C++T+
Sbjct: 143 KTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLP 202
Query: 234 AHSEPINALVVADDGVLY-SASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKXXXX 291
AHS+P++A+ DG L S S D VR+W + Q + TL+ + PV
Sbjct: 203 AHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT---ANGQCVKTLV---DDENPPVAFVKF 256
Query: 292 XXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADS 349
+ W G QY G + + + + SV ++ISGS D
Sbjct: 257 SPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH-ENNKYCIFANFSVTGGKWIISGSEDC 315
Query: 350 TSRVW 354
VW
Sbjct: 316 KIYVW 320
Score = 109 (43.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIE 230
+TIP G + + I G H I+++ + L ++S DKT+K+W + D C
Sbjct: 62 STIPGAGYKLISTIEG------HTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCER 115
Query: 231 TIQAHSEPINALV-VADDGVLYSASDDATVRVW 262
T+ H +N AD + +ASDD T++++
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIY 148
Score = 89 (36.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 325 LQGHTHAVMC--LASVANYVISGSADSTSRVWAREQDGRHTM-LAVLVGHRGPIRCAIAF 381
L+GHT+ V C ++ V+SGS D + R+W D R M + L H P+ A++F
Sbjct: 159 LKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW----DVRTGMCVKTLPAHSDPVS-AVSF 213
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMW 408
R G I +GS DG++++W
Sbjct: 214 -NRDGS-------LITSGSYDGLVRIW 232
Score = 60 (26.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+ SGS D R+W +G+ + LV P +AF+ +F +Y I + +L
Sbjct: 220 ITSGSYDGLVRIWDTA-NGQ--CVKTLVDDENP---PVAFV-KFSPN--GKY--ILSSNL 268
Query: 402 DGVLKMWRVTRPKSSCGHLNKTNGHE 427
D LK+W + K+ L + GHE
Sbjct: 269 DNTLKLWDFGKGKT----LKQYQGHE 290
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 324 ALQGHTHAVMC--LASVANYVISGSA--DSTSRVW 354
+L+GHT AV+ + N + SG+ D+T R+W
Sbjct: 330 SLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 306 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVT 362
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 363 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 413
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 414 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 470
Query: 373 GPIRC 377
+RC
Sbjct: 471 ELVRC 475
Score = 113 (44.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 413 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 469
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 470 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLVAALDPRAPAGTL 510
Score = 90 (36.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 273 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 331
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 332 WD--VNTGEMLNTLI 344
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 346 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 398
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 399 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 430
Score = 73 (30.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 270 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 328
Query: 154 IRVW 157
+RVW
Sbjct: 329 VRVW 332
Score = 63 (27.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 308 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 367
Query: 153 KIRVW 157
I VW
Sbjct: 368 SIAVW 372
Score = 57 (25.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 350 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 409
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 410 RTIKVWNTS 418
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 131 (51.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 53/238 (22%), Positives = 102/238 (42%)
Query: 178 GAVRNLIVGKDKMMKHMGPITSIAINVS-DDT---LYSASLDKTIKVWRIRDSKCIETIQ 233
G V+ V D + +G +S +++ DD+ L +A D +W IR K + ++
Sbjct: 960 GTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLK 1019
Query: 234 AHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXX 293
H++ I ++ + +D L + SDD T RVW S + L PV+
Sbjct: 1020 GHTKWIRSIRMVED-TLITGSDDWTARVWS---VSRGSCDAV---LACHAGPVQSVEYSP 1072
Query: 294 XXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRV 353
+ +W + L H+ +++ + + N++ G+AD++ +
Sbjct: 1073 FDKGIITGSADGLLRFWENDEGGIKCVKNITL--HSSSILSINAGENWLGIGAADNSMSL 1130
Query: 354 WAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411
+ R + T ++ +R P R A A + + E + IC+G +GVL++W T
Sbjct: 1131 FHRPSNAG-TKVSGWQLYRVPQRTA-AVVRCVASDLERK--RICSGGRNGVLRLWDAT 1184
Score = 78 (32.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVYAAYGD 151
G + I+ G I +GSD + +W + LK S V +++ S +RV A D
Sbjct: 900 GTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHD 959
Query: 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNL 183
G +++W D V AT+ + A+ +L
Sbjct: 960 GTVKMWDVRTDMCV-----ATVGRCSSAILSL 986
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 118 (46.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC-IETIQAHSEPINALVVADDG-VL 250
H +TS+ + + L SAS D+T+++W I D + +AH+ P+ ++ + DG L
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+AS+D +++VW +R+ YS + HT + AK+SP
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRC-AKFSP 112
Score = 110 (43.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 186 GKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
GK K H P+ S+ + L +AS DK+IKVW + + + ++ H+ +
Sbjct: 51 GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 110
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG ++ S S+D T+++W
Sbjct: 111 SPDGRLIVSCSEDKTIKIW 129
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY- 251
H G + I+ + S + L +AS D T+K+ + + + I T+Q H+ P+ + + G L+
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 244
Query: 252 SASDDATVRVWRRYFYSENQLHTLILT 278
S D V +WR F ++LH LT
Sbjct: 245 SGGADTQVLLWRTNF---DELHCKGLT 268
Score = 81 (33.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ V C++ NY+I+ S+D T ++ +GR ++ L GH GP+ ++F
Sbjct: 183 QVHSGGVNCISFHPSGNYLITASSDGTLKILDL-LEGR--LIYTLQGHTGPV-FTVSF-S 237
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ GE +G D + +WR + C L K N
Sbjct: 238 KGGE-------LFASGGADTQVLLWRTNFDELHCKGLTKRN 271
Score = 77 (32.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+ S S DKTIK+W + +C+ N + G + SA D TV+VW
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 56 (24.8 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 101 GNGFIYTGSDSNVIRIW---KQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIR 155
GN + + S +R+W K+ +F+E KA T+ V +++ S D + A D I+
Sbjct: 30 GN-LLASASRDRTVRLWIPDKRGKFSE---FKAHTAPVRSVDFSADGQFLATASEDKSIK 85
Query: 156 VW 157
VW
Sbjct: 86 VW 87
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 117 (46.2 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 179 AVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS 236
A+ ++ G+ K + H G S+A++ S + D T K+W +R+ C +T H
Sbjct: 167 ALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHE 226
Query: 237 EPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDAT R++
Sbjct: 227 SDINAICFFPNGEAICTGSDDATCRLF 253
Score = 69 (29.3 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSLKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 328 HTH-AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIA 380
++H +++C + SVA +++G D +W + R + +L GH + C
Sbjct: 264 YSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAER---VGILSGHDNRVSC--- 317
Query: 381 FLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG T D + TGS D LK+W
Sbjct: 318 -LG----VTADGMA-VATGSWDSFLKIW 339
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM S D + +A DGK+ VW + N V + L
Sbjct: 51 LRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPL 95
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 140 (54.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 56 (24.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 22/89 (24%), Positives = 36/89 (40%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
+++SGS D T ++W L LVGH +R + G ++ C
Sbjct: 310 FLLSGSRDKTIKMW---DISTGMCLMTLVGHDNWVRGVLFHSG-------GKFILSCAD- 358
Query: 401 LDGVLKMWRVTRPKSSCGHLNKTNGHEYF 429
D L++W + C + N HE+F
Sbjct: 359 -DKTLRVWDFKNKR--C--MKTLNAHEHF 382
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DFKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 342 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVT 398
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 399 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 449
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 506
Query: 373 GPIRC 377
+RC
Sbjct: 507 ELVRC 511
Score = 113 (44.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 449 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 505
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 506 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLVAALDPRAPAGTL 546
Score = 90 (36.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 367
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 368 WD--VNTGEMLNTLI 380
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 434
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 435 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 466
Score = 73 (30.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 364
Query: 154 IRVW 157
+RVW
Sbjct: 365 VRVW 368
Score = 63 (27.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 344 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 153 KIRVW 157
I VW
Sbjct: 404 SIAVW 408
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 446 RTIKVWNTS 454
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 342 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF-NNGMMVT 398
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 399 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 449
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 506
Query: 373 GPIRC 377
+RC
Sbjct: 507 ELVRC 511
Score = 112 (44.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 449 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 505
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 506 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLMAALDPRAPAGTL 546
Score = 90 (36.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 367
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 368 WD--VNAGEMLNTLI 380
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 434
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 435 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 466
Score = 73 (30.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 364
Query: 154 IRVW 157
+RVW
Sbjct: 365 VRVW 368
Score = 63 (27.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 344 GSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 153 KIRVW 157
I VW
Sbjct: 404 SIAVW 408
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 446 RTIKVWNTS 454
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + + + + + + S D T++VW + + + T+ H E + L ++G++ +
Sbjct: 342 HTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF-NNGMMVT 398
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
S D ++ VW ++ L +++ A + V K
Sbjct: 399 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI---------K 449
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHR 372
W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHE 506
Query: 373 GPIRC 377
+RC
Sbjct: 507 ELVRC 511
Score = 112 (44.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 449 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 505
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR---PKSSCGHL 420
+RC RF + I +G+ DG +K+W + P++ G L
Sbjct: 506 EELVRCI-----RFDNKR------IVSGAYDGKIKVWDLMAALDPRAPAGTL 546
Score = 90 (36.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+ D + S D TIK+W +C + H+ + L D+ V+ + S D+TVRV
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRV 367
Query: 262 WRRYFYSENQLHTLI 276
W + L+TLI
Sbjct: 368 WD--VNAGEMLNTLI 380
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 434
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 435 --DDKYIVSASG--DRTIKVWNT----STCEFVRTLNGHK 466
Score = 73 (30.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC R L T V+ ++ + D
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKSTL-ECKRILTGHTGSVLCLQYDERVIITGSSDST 364
Query: 154 IRVW 157
+RVW
Sbjct: 365 VRVW 368
Score = 63 (27.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G +LC+ I TGS + +R+W L V+ + ++ + D
Sbjct: 344 GSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 403
Query: 153 KIRVW 157
I VW
Sbjct: 404 SIAVW 408
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHDRVY--AAYGD 151
+L + NG + T S I +W T+ + A+ V D Y +A GD
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 152 GKIRVWRST 160
I+VW ++
Sbjct: 446 RTIKVWNTS 454
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 135 (52.6 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKT+K+W + C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LLASCSNDQTVRVW 261
Score = 110 (43.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 188 DKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD 246
++ +K H + I+ + + L S S D TIK+W + +CI T+ H ++++ +
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 247 DGV-LYSASDDATVRVW 262
+G + SAS D T+++W
Sbjct: 203 NGDHIVSASRDKTMKMW 219
Score = 100 (40.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVW 262
L S S DKTIK+W I C+ T+ H + ++ G + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Score = 60 (26.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVW 354
L H H V L + YV++GS D T +VW
Sbjct: 376 LSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 51 (23.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL--GRFGEETEDE 392
+++SGS D T ++W L LVGH +R + F GRF D+
Sbjct: 310 FLLSGSRDKTIKMW---DISTGMCLMTLVGHDNWVR-GVLFHPGGRFVVSCADD 359
Score = 43 (20.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
+V+S + D T R+W + + M L H F+ Y + TGS
Sbjct: 352 FVVSCADDKTLRIW--DYKNKRCM-KTLSAHEH-------FVTSLDFHKASPY--VVTGS 399
Query: 401 LDGVLKMW 408
+D +K+W
Sbjct: 400 VDQTVKVW 407
Score = 39 (18.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW ++
Sbjct: 311 LLSGSRDKTIKMWDIS 326
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 136 (52.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 172 TIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231
+IP+T N I+ K + H+ I+S+ + L SAS DKTIK+W D K T
Sbjct: 29 SIPQTP----NYIL-KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT 83
Query: 232 IQAHSEPINALVVADDGVLY-SASDDATVRVW 262
++ H E I+ + + D L SASDD T+++W
Sbjct: 84 LEGHKEGISDIAWSQDSKLICSASDDKTIKIW 115
Score = 130 (50.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK----HMGPITSIAINVSDDTLYSASLDK 216
W K + A+ KT ++ V KM+K H + ++ N + + S S D+
Sbjct: 96 WSQDSKLICSASDDKT---IKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDE 152
Query: 217 TIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY-SASDDATVRVW 262
+++W + +C + I AHS+P+ + DG L S S D TVR+W
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/232 (21%), Positives = 96/232 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ IA + + SAS DKTIK+W + K ++T++ H E + + ++
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D VR+W + + +I +A PV + W
Sbjct: 147 SGSFDENVRIWD---VNTGECTKMI---SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Query: 312 KGWFSAQLQYGGALQ-GHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG 370
+ QL + + G + + + +V++G+ D+T R+W+ + + L G
Sbjct: 201 TT--TGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKK--CLKTYTG 256
Query: 371 HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV-TRP--KSSCGH 419
H+ C + T ++ I TGS D ++ ++ + TR ++ GH
Sbjct: 257 HKNEKYCIFSTFS----VTCGKW--IVTGSEDNLIYIYNLQTREIVQTLAGH 302
Score = 55 (24.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
V+SGS D T R+W G+ +L + G ++F+ +F + + G+L
Sbjct: 187 VVSGSYDGTVRIWDTTT-GQ--LLNTISTEDGK---EVSFV-KFSPNGK----FVLAGTL 235
Query: 402 DGVLKMWRVTRPKSSCGHLNKTNGHE 427
D L++W K C L GH+
Sbjct: 236 DNTLRLWSYNNNKK-C--LKTYTGHK 258
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 130 (50.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 363 DLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAII 421
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 422 NTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAV 459
Score = 93 (37.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV--ADDGVL 250
H+ + + ++ + D L + S D T +VW IR + T+ H+ + + A+ V+
Sbjct: 291 HLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVV 350
Query: 251 YSASDDATVRVW 262
S D T+R+W
Sbjct: 351 TVGSHDTTIRLW 362
Score = 68 (29.0 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
YR IS L G + IAV GN + TGS I+IW L S V +
Sbjct: 201 YRVISGHL---GWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVA 257
Query: 140 VSHDRVYA-AYGDGK-IRVWRSTWDNGVKH 167
VS+ Y + G+ K ++ W ++ ++H
Sbjct: 258 VSNRSPYLFSCGEDKQVKCWDLEYNKVIRH 287
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
K+ H G I+ I+ N + L + S DKT ++W + +C++ ++ H++ I + G
Sbjct: 340 KLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 399
Query: 249 -VLYSASDDATVRVWR 263
++ + S D T R+WR
Sbjct: 400 NIVITGSKDNTCRIWR 415
Score = 99 (39.9 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 176 TGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
TG V N+++G H I+S + N + + S+DKT K+W + KC+ T+ H
Sbjct: 250 TGRKV-NILIG------HCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH 302
Query: 236 SEPINALVVADDGVLYS-ASDDATVRVW 262
+ I G L + AS D T R++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIF 330
Score = 96 (38.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 193 HMGPITSIAINVS-DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H + +IA N D + + S DKT K+W + KC T + H+ I L L
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV 192
Query: 252 SA-SDDATVRVW 262
+ S D T ++W
Sbjct: 193 ATGSMDTTAKLW 204
Score = 95 (38.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K++K H+ P+T++A+N S + S D+T K+W + + T++ H + A+ +
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 248 -G-VLYSASDDATVRVW 262
G + + S D T ++W
Sbjct: 146 YGDKIATGSFDKTCKLW 162
Score = 89 (36.4 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI-RCAIAF 381
L+GH + ++ N++++GS+D T+R+W Q G+ L VL GH I CA +
Sbjct: 341 LEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA-QTGQ--CLQVLEGHTDEIFSCAFNY 397
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
G + TGS D ++WR
Sbjct: 398 KGNI----------VITGSKDNTCRIWR 415
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H I ++ N + + S+D T K+W I++ + + T++ HS I +L G +
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII 235
Query: 252 SASDDATVRVW 262
+ S D TV VW
Sbjct: 236 TGSFDHTVVVW 246
Score = 82 (33.9 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA-DDGVLY 251
H I S++ N S D + + S D T+ VW + + + H I++ D ++
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLIL 277
Query: 252 SASDDATVRVW 262
+ S D T ++W
Sbjct: 278 TGSMDKTCKLW 288
Score = 82 (33.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L+GH+ ++ L+ + + +I+GS D T VW + GR + +L+GH CA
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT-GRK--VNILIGH-----CAEISS 266
Query: 383 GRFGEETEDEYCT-ICTGSLDGVLKMWRVTRPK 414
F + C+ I TGS+D K+W T K
Sbjct: 267 ASFNWD-----CSLILTGSMDKTCKLWDATNGK 294
Score = 62 (26.9 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 312 KGWFSAQLQYGGALQGHTHAVM--CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369
K W + + L GH ++ C + + SAD T+R+++ +A L
Sbjct: 286 KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA---ATRKCIAKLE 342
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
GH G I I+F + G + TGS D ++W
Sbjct: 343 GHEGEIS-KISFNPQ-GNH-------LLTGSSDKTARIW 372
Score = 47 (21.6 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH---DRVYAAYGDGKIRVW 157
G+ FI TGS ++W E L+ ++V A+ ++ D++ D ++W
Sbjct: 104 GSCFI-TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 123 (48.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 358 DLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAII 416
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 417 NTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 454
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 287 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII 346
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 347 TGSHDTTIRLW 357
Score = 75 (31.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 197 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 254 VSTRSPY--LFSCGEDKQVKCWDLEYNKVIRH 283
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 105 IYTGSDSNVIRIW 117
I TGS IR+W
Sbjct: 345 IITGSHDTTIRLW 357
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 112 (44.5 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H+G + S+A + S++ + S D+TIK+W + T+ H E + L V++ ++
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMF 234
Query: 252 SASDDATVRVW 262
SA DD V+ W
Sbjct: 235 SAGDDKQVKCW 245
Score = 86 (35.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTM-LAVL 368
K W Q + + GH V CLA + +++G DS RVW D R M + L
Sbjct: 243 KCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW----DIRTKMQIFAL 298
Query: 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW--RVTRPKSSCGHLNKT 423
GH + C++ F T+ + + TGS D +K W R + S+ H K+
Sbjct: 299 SGHDNTV-CSV-----FTRPTDPQ---VVTGSHDTTIKFWDLRYGKTMSTLTHHKKS 346
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 109 (43.4 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + ++++ T S + D + K+W IR+ C +T H INA+ +G ++
Sbjct: 183 HTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFA 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 72 (30.4 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + + G L GH + V CL N V +GS DS RVW
Sbjct: 297 WDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVW 339
Score = 58 (25.5 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 25/90 (27%), Positives = 39/90 (43%)
Query: 324 ALQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378
A+ H + + + SVA +++G D VW + R +LA GH + C
Sbjct: 262 AMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILA---GHDNRVSC- 317
Query: 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG TE+ + TGS D L++W
Sbjct: 318 ---LG----VTENGMA-VATGSWDSFLRVW 339
Score = 48 (22.0 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM +D + +A DGK+ VW S N V + L
Sbjct: 51 LRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 95
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 137 (53.3 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SA+ DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 56 (24.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400
+++SGS D T ++W G L LVGH +R + G ++ C
Sbjct: 310 FLLSGSRDKTIKMWD-VSTGM--CLMTLVGHDNWVRGVLFHSG-------GKFILSCAD- 358
Query: 401 LDGVLKMWRVTRPKSSCGHLNKTNGHEYF 429
D L++W + C + N HE+F
Sbjct: 359 -DKTLRVWDYKNKR--C--MKTLNAHEHF 382
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 116 (45.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 36/164 (21%), Positives = 70/164 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H+ + S+A++ + D L ++ D T ++W +R + T+ H+ + ++V A + +
Sbjct: 255 HLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQII 314
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
+ S D+TVR+W + + TLT V+
Sbjct: 315 TGSHDSTVRLW------DLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNI----- 363
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYV-ISGSADSTSRVW 354
K W + ++ + GHT V C+A+ + V +SG + T W
Sbjct: 364 KQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFW 407
Score = 107 (42.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 182 NLIVGKD--KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L GK + H + SI ++ S SAS D IK WR + K ++ I H+ +
Sbjct: 326 DLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIV 384
Query: 240 NALVVADDGVLYSASDDATVRVW 262
N + +GVL S D+ T+ W
Sbjct: 385 NCMAANSEGVLVSGGDNGTMFFW 407
Score = 90 (36.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 30/172 (17%), Positives = 67/172 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H + S+ ++ + + S D T+++W + K + T+ H + + ++V+ +++
Sbjct: 297 HTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFA 356
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY-WH 311
++ ++ WR E + + ++ S V + W
Sbjct: 357 SASPDNIKQWR---CPEGKF---VQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWR 410
Query: 312 KGW----FSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
G+ F A +Q G MC + +I+ AD T +V+ +E D
Sbjct: 411 TGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY-KEDD 461
Score = 85 (35.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 319 LQYGGALQ---GHTHAVMCLA--SVANYVISGSADSTSRVW-AREQDGRHTMLAVLVGHR 372
L+Y ++ GH AV LA + + + DST+R+W R + HT L GH
Sbjct: 243 LEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHT----LTGHT 298
Query: 373 GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417
+ +A + T + I TGS D +++W + KS C
Sbjct: 299 NTVASVVA------QATNPQ---IITGSHDSTVRLWDLAAGKSVC 334
Score = 82 (33.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H+G + IA+ ++ + + D+ IK+W + K ++ H + + V+ L+
Sbjct: 171 HLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLF 230
Query: 252 SASDDATVRVW 262
S +D V+ W
Sbjct: 231 SCGEDRQVKCW 241
Score = 81 (33.6 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 93 GQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAA 148
G + CIAV GN + TG+ VI+IW L S V VA+ H +++
Sbjct: 173 GWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSC 232
Query: 149 YGDGKIRVWRSTWDNGVKH 167
D +++ W ++ ++H
Sbjct: 233 GEDRQVKCWDLEYNKVIRH 251
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 134 (52.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 42/186 (22%), Positives = 79/186 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTI-KVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + + + + + + S D T+ +VW + + + T+ H+E + L ++ G++
Sbjct: 259 HTGSV--LCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSN-GLMV 315
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
+ S D ++ VW ++ L +++ A + V
Sbjct: 316 TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI--------- 366
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 367 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 423
Query: 372 RGPIRC 377
+RC
Sbjct: 424 EELVRC 429
Score = 112 (44.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
K W ++ ++ L GH + CL V+SGS+D+T R+W E L VL GH
Sbjct: 367 KVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGH 423
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+RC RF + I +G+ DG +K+W
Sbjct: 424 EELVRCI-----RFDNKR------IVSGAYDGKIKVW 449
Score = 86 (35.3 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATV-R 260
+ D+ + S D +IK+W +C++ + H+ + L D+ V+ + S D+TV R
Sbjct: 226 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY-DERVIVTGSSDSTVSR 284
Query: 261 VW 262
VW
Sbjct: 285 VW 286
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGE 387
H AV+ L +++ S D + VW T+ VLVGHR + + F
Sbjct: 300 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF------ 352
Query: 388 ETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+D+Y +G D +K+W S+C + NGH+
Sbjct: 353 --DDKYIVSASG--DRTIKVWST----STCEFVRTLNGHK 384
Score = 70 (29.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGS-DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
C+ + G +LC+ I TGS DS V R+W L V+ + S+
Sbjct: 252 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSN 311
Query: 143 DRVYAAYGDGKIRVW 157
+ D I VW
Sbjct: 312 GLMVTCSKDRSIAVW 326
Score = 59 (25.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV-SHD 143
+++++ + +L + NG + T S I +W T+ + A+ V D
Sbjct: 294 LNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 353
Query: 144 RVY--AAYGDGKIRVWRST 160
Y +A GD I+VW ++
Sbjct: 354 DKYIVSASGDRTIKVWSTS 372
Score = 58 (25.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153
+ C+ + I +G N I+IW + EC + L T V+ ++ + D
Sbjct: 223 VYCLQYDDEKIISGLRDNSIKIWDKTSL-ECLKVLTGHTGSVLCLQYDERVIVTGSSDST 281
Query: 154 I-RVW 157
+ RVW
Sbjct: 282 VSRVW 286
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 135 VVAMEVSHDRVYAAYGDGKIRVWRST 160
V ++ +++ + D I++W T
Sbjct: 223 VYCLQYDDEKIISGLRDNSIKIWDKT 248
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 132 (51.5 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I+S+ + + L S S+D IK+W +R C+ + H++ + L + DG
Sbjct: 101 LMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SASDD+TV++W
Sbjct: 161 WLASASDDSTVKLW 174
Score = 57 (25.1 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 328 HTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
HT AV + N Y++ SGSAD T ++W E + M+ G G +R +
Sbjct: 188 HTSAVNVVQFHPNEYLLASGSADRTVKLWDLE---KFNMIGSSEGETGVVRSVL 238
Score = 50 (22.7 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG + + IW + L TS V + S +RV A G
Sbjct: 26 LVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSG 85
Query: 153 KIRVW 157
+R+W
Sbjct: 86 SLRLW 90
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 118 (46.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGV-L 250
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG L
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +R+ +S Q H + AK+SP
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQ-H-INWVRCAKFSP 155
Score = 109 (43.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW R + ++ Q HS +NAL G L
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYL 244
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 245 ITASSDSTLKI 255
Score = 104 (41.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ +L +AS DKT+KVW + + ++ H +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCA 151
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 152 KFSPDGRLIVSASDDKTVKLW 172
Score = 77 (32.2 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +CI + H + + G
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT 200
Query: 250 LYSASD-DATVRVW--RRYFYSEN-QLHT 274
+A+ D TV+VW R + ++ QLH+
Sbjct: 201 CIAAAGMDNTVKVWDARTHRLLQHYQLHS 229
Score = 76 (31.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+I+ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 226 QLHSAAVNALSFHPSGNYLITASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 281
Query: 382 LGR-FGEETEDEYCTICTGSLD----GVLKMWRVTRPKSSCGHLNK 422
G F DE + + D G +K R SS G L K
Sbjct: 282 TGEYFASGGSDEQVMVWKSNFDIVDYGDMKARRPPPLTSSSGTLPK 327
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVY 146
KD + C+ +G + +GS +RIW E +A T+ V ++ D +
Sbjct: 61 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLV 119
Query: 147 AAYGDGKIRVW 157
A D ++VW
Sbjct: 120 TASDDKTVKVW 130
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 139 (54.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W + C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S+S+D TVRVW
Sbjct: 248 LIASSSNDQTVRVW 261
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 188 DKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD 246
++ +K H + I+ + + L S S D TIK+W + +CI T+ H ++++ +
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 247 DGV-LYSASDDATVRVW 262
+G + SAS D T+++W
Sbjct: 203 NGDHIVSASRDKTIKMW 219
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 341 YVISGSADSTSRVWAREQDGRHTM-LAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399
+++SGS D T ++W D M L LVGH +R + G +Y C
Sbjct: 310 FLLSGSRDKTIKMW----DVSIGMCLMTLVGHDNWVRGVLVHPG-------GKYIVSCAD 358
Query: 400 SLDGVLKMWRVTRPKSSCGHLNKTNGHEYF 429
D L++W + C + HE+F
Sbjct: 359 --DKTLRIWDYKNKR--C--TKTLSAHEHF 382
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/79 (25%), Positives = 30/79 (37%)
Query: 342 VISGSADSTSRVWA------REQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCT 395
+ S S D T RVW + + H + + P L G ET+
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREHEHVVECISW-APESAHPTILEATGSETKKSGKP 307
Query: 396 ---ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
Score = 42 (19.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + + Y++S + D T R+W + R T L H + ++ F
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK-RCTK--TLSAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 63/279 (22%), Positives = 111/279 (39%)
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPK--TGGA------VRNLIVGKD-KMMK-H 193
+++ AY DGK S G+ V ++ + G+ V L GK K +K H
Sbjct: 97 KIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGH 155
Query: 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYS 252
+ N + + S S D+++++W +R KC++T+ AHS+P++A+ DG ++ S
Sbjct: 156 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 215
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
+S D R+W S L TLI PV + W
Sbjct: 216 SSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 270
Query: 313 GWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVG 370
Y G + + + SV +++SGS D+ +W + ++ L G
Sbjct: 271 SKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSK---EVVQKLQG 326
Query: 371 HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
H + C TE+ + + D +K+W+
Sbjct: 327 HTDTVLCTAC------HPTENIIASAALEN-DKTIKLWK 358
Score = 112 (44.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H ++++ + + + L S+S DK IK+W D K +TI H I+ + + D +L
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 252 SASDDATVRVW 262
S SDD T++VW
Sbjct: 131 SGSDDKTLKVW 141
Score = 53 (23.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 213 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 261
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 262 DNTLKLWDYSKGKCLKTYTGHKNE 285
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 145 (56.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 33/164 (20%), Positives = 77/164 (46%)
Query: 105 IYTGSDSNVIRIWKQPEFTECGRL------KAKTSMVVAMEVSHDRVYAAYGDGKIRVWR 158
+Y+ S ++IW + ++ +A + M ++ ++ A DG I++W
Sbjct: 652 LYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRRSIEKMLLNEKYLFTASSDGTIKIWS 711
Query: 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTI 218
+ + + +GK + H + + I++ ++ L S S DK I
Sbjct: 712 LPTTTTTTTTSKQSSSSSSSSYE--CIGK--LEDHTAEVNDMCIDIENNFLVSCSFDKQI 767
Query: 219 KVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
K++ + KCI+++ AH + I ++ ++ L+S+S+D ++++W
Sbjct: 768 KIYDLSTFKCIKSLNAHGKSIKSIYMSGK-YLFSSSNDQSIKIW 810
Score = 111 (44.1 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H PITS+ + + L+SAS D IK W + + T+ H+ I ++V +G L+
Sbjct: 825 HDAPITSL--RMFGNRLFSASKDGEIKDWNLSTFQPTTTLDQHNMAITDILVTSNGYLFV 882
Query: 253 ASDDATVRV 261
+SDD+T+R+
Sbjct: 883 SSDDSTIRI 891
Score = 70 (29.7 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 82 YRCISSVLKKDGQI--LCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
Y CI + ++ +CI + N F+ + S I+I+ F L A + ++
Sbjct: 733 YECIGKLEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIY 792
Query: 140 VSHDRVYAAYGDGKIRVW 157
+S ++++ D I++W
Sbjct: 793 MSGKYLFSSSNDQSIKIW 810
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 3 SLDSPNPSFAIRETTPTGTAPSTFLRSISTKEPSFSTFPYSPPRFSSPISLHT 55
S+ + N S A TTP+ T ST + S + S +SPIS T
Sbjct: 88 SMTNSNNSSATSSTTPSPTQTSTITTTSQIDPNSLTNSNNSFIPINSPISQTT 140
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN-YVISGSADSTSRVW-AREQDGRHTMLAVLV 369
K W + Q L H A+ + +N Y+ S DST R+ Q+ +++
Sbjct: 849 KDWNLSTFQPTTTLDQHNMAITDILVTSNGYLFVSSDDSTIRIIDISNQNEPIKIISSTK 908
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
HR + ++A G+ I +G D ++K+W
Sbjct: 909 AHRSGVN-SLATDGK----------RIFSGGCDNLIKVW 936
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/229 (24%), Positives = 94/229 (41%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD--- 246
+ H+ P+T++A N S + S D+T K+W + + T++ H + A+ +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 247 DGVLYSASDDATVRVWR----RYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXX 302
D V + S D T ++W + FY+ HT + A ++P
Sbjct: 148 DKVA-TGSFDKTCKLWSAETGKCFYTFRG-HTAEIVCLA-FNPQSTLVATGSMDTTA--- 201
Query: 303 XXXXIHYWHKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDG 360
K W + L GH + +C + + +++GS D T+ +W G
Sbjct: 202 ---------KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD-VPSG 251
Query: 361 RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCT-ICTGSLDGVLKMW 408
R + VL GHRG I C +F + C+ I T SLD K+W
Sbjct: 252 RK--VHVLSGHRGEISCV-----QFNWD-----CSLIATASLDKSCKVW 288
Score = 121 (47.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H G I+ + N + +AS+DKT +VW ++ C++ ++ HS+ I + +G +
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTII 403
Query: 252 SASDDATVRVW 262
+ S D T R+W
Sbjct: 404 TGSKDNTCRIW 414
Score = 98 (39.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G I+ + N + +ASLDK+ KVW +C+ T+ H++ + + G L +
Sbjct: 260 HRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIA 319
Query: 253 -ASDDATVRVW 262
AS D T RV+
Sbjct: 320 TASADGTSRVF 330
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI-RCAIAF 381
L+GH + +C + + V++ S D TSRVW + G L VL GH I CA +
Sbjct: 341 LEGHKGEISKVCFNAQGSRVLTASVDKTSRVWC-VKTG--ACLQVLEGHSDEIFSCAFNY 397
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMW 408
G D TI TGS D ++W
Sbjct: 398 EG-------D---TIITGSKDNTCRIW 414
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH---DRVYAAYGDGKIRVW 157
G+ FI TGS +IW E L+ ++V A+ ++ D+V D ++W
Sbjct: 104 GSCFI-TGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLW 162
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 193 HMGPITSIAI-NVSDDT----LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
H GP+T I ++ D +Y+ S D TIK W + +C+ET+ H++ + L++ ++
Sbjct: 84 HSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEE 143
Query: 248 -GVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G+L S S DA++ VW +Q L+ LT ++
Sbjct: 144 EGLLLSGSTDASLIVWD----VSSQPSRLLYKLTGHSRGIECITRQPNTDIFWTCGSESS 199
Query: 307 IHYWHKGWFS-AQLQYGGALQGHTHAVMCLA---SVANYVISGSADSTSRVWAREQDGRH 362
I WH +QL+ G GH V CL + + + SAD T R W+ Q G H
Sbjct: 200 IRCWHITKVGGSQLEEEG-FWGHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQ-GIH 257
>TAIR|locus:2131799 [details] [associations]
symbol:ZFWD1 "zinc finger WD40 repeat protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR000571
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642
PROSITE:PS50082 PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320
SMART:SM00356 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL079350
EMBL:AJ252063 EMBL:BT026122 IPI:IPI00530759 RefSeq:NP_194274.2
UniGene:At.32255 ProteinModelPortal:Q9FNZ2 SMR:Q9FNZ2 IntAct:Q9FNZ2
STRING:Q9FNZ2 PRIDE:Q9FNZ2 EnsemblPlants:AT4G25440.1 GeneID:828649
KEGG:ath:AT4G25440 GeneFarm:3766 TAIR:At4g25440
HOGENOM:HOG000239729 InParanoid:Q9FNZ2 OMA:WNTQTNT PhylomeDB:Q9FNZ2
ProtClustDB:CLSN2687444 Genevestigator:Q9FNZ2 Uniprot:Q9FNZ2
Length = 430
Score = 118 (46.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATV 259
+++ V + LYS ++D +IKVW + + +CI+T+ H+ + +L+ D +L S S D TV
Sbjct: 271 VSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLL-SCSLDNTV 329
Query: 260 RVW 262
++W
Sbjct: 330 KIW 332
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC----GRLKAKTSMVVAMEVSHDRVYAA 148
GQ+ + VG ++ G+ I +W+ T C L T VV++ V +R+Y+
Sbjct: 224 GQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSG 283
Query: 149 YGDGKIRVW 157
D I+VW
Sbjct: 284 AMDNSIKVW 292
Score = 75 (31.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH 142
+C + VL G++ CI ++ G N+++ W + L V ++ V
Sbjct: 177 QC-TGVLNLGGEVGCIISEGPWLLVGMP-NLVKAWNIQNNADLS-LNGPVGQVYSLVVGT 233
Query: 143 DRVYAAYGDGKIRVWR 158
D ++A DG I VWR
Sbjct: 234 DLLFAGTQDGSILVWR 249
Score = 71 (30.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360
K W LQ L HT VM L +++S S D+T ++WA + G
Sbjct: 290 KVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGG 338
Score = 69 (29.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 198 TSIAINVS--DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
TS+ +++ D L S SLD T+K+W + +E H E L +
Sbjct: 307 TSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLAL 355
Score = 44 (20.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIW 117
+ + G+ +YT S +RIW
Sbjct: 150 IALPSGSDKLYTASKDETVRIW 171
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 41/168 (24%), Positives = 69/168 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H ITS+ ++ + L +AS D + +W + H + + ++ + G +L
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLA 76
Query: 252 SASDDATVRVW---RRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIH 308
SAS D TVR+W +R +SE + HT +PV+ I
Sbjct: 77 SASRDRTVRLWIPDKRGKFSEFKAHT---------APVRSVDFSADGQFLATASEDKSIK 127
Query: 309 YWHKGWFSAQLQYGGALQGHTHAVMC--LASVANYVISGSADSTSRVW 354
W + + Y +L HTH V C + ++S S D T ++W
Sbjct: 128 VW--SMYRQRFLY--SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 112 (44.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY- 251
H G + I+ + SD+ L +AS D T+K+ + + + I T+Q H+ P+ + + G L+
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 252 SASDDATVRVWRRYFYSENQLH 273
S D V +WR F ++LH
Sbjct: 287 SGGADTQVLLWRTNF---DELH 305
Score = 110 (43.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 186 GKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
GK K H P+ S+ + L +AS DK+IKVW + + + ++ H+ +
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG ++ S S+D T+++W
Sbjct: 153 SPDGRLIVSCSEDKTIKIW 171
Score = 84 (34.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ V C++ NY+++ S+D T ++ +GR ++ L GH GP+ ++F
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASSDGTLKILDL-LEGR--LIYTLQGHTGPV-FTVSF-S 279
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ GE +G D + +WR + C LNK N
Sbjct: 280 KGGE-------LFASGGADTQVLLWRTNFDELHCKGLNKRN 313
Score = 77 (32.2 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+ S S DKTIK+W + +C+ N + G + SA D TV+VW
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 56 (24.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 101 GNGFIYTGSDSNVIRIW---KQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIR 155
GN + + S +R+W K+ +F+E KA T+ V +++ S D + A D I+
Sbjct: 72 GN-LLASASRDRTVRLWIPDKRGKFSE---FKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 156 VW 157
VW
Sbjct: 128 VW 129
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 117 (46.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +AS+D T+KVW +R + ++ Q HS +NAL G L
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 244
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 245 LTASSDSTLKI 255
Score = 114 (45.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGV-L 250
H +T + + S L S S DKT+++W I + K T+ +AH+ + ++ DG L
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +++ +S +Q H + A++SP
Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQ-H-INWVRCARFSP 155
Score = 107 (42.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ +L +AS DKT+KVW K + ++ H +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCA 151
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 152 RFSPDGRLIVSASDDKTVKLW 172
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 23/89 (25%), Positives = 43/89 (48%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +C+ + H + + G
Sbjct: 141 LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 250 -LYSASDDATVRVW--RRYFYSEN-QLHT 274
+ +AS D TV+VW R + ++ QLH+
Sbjct: 201 CIAAASMDNTVKVWDVRTHRLLQHYQLHS 229
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+++ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 226 QLHSAAVNALSFHPSGNYLLTASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 281
Query: 382 LGR-FGEETEDEYCTICTGSLD-----GVLKMWRVTRPKSSCGHL 420
G F DE + + D V+K+ R P ++ G+L
Sbjct: 282 TGEYFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPAPLATSGNL 326
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVY 146
KD + C+ +G + +GS +RIW E +A T+ V ++ D +
Sbjct: 61 KDA-VTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLV 119
Query: 147 AAYGDGKIRVW 157
A D ++VW
Sbjct: 120 TASDDKTVKVW 130
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 119 (46.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 182 NLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239
+L+ GK + + H + ++ ++ T S S D IK W+ D I+ + H+ I
Sbjct: 357 DLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAII 415
Query: 240 NALVVADDGVLYSASDDATVRVWR-RYFYSENQLHTLI 276
N L V DGVL S +D+ T+ +W R Y+ ++H +
Sbjct: 416 NTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 453
Score = 93 (37.8 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 16/71 (22%), Positives = 36/71 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL-VVADDGVLY 251
H+ + + ++ + D L + S D T ++W +R + T+ H+ + + A + +
Sbjct: 286 HLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII 345
Query: 252 SASDDATVRVW 262
+ S D T+R+W
Sbjct: 346 TGSHDTTIRLW 356
Score = 75 (31.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
YR IS L G + CIAV GN + TGS I+IW + + + G + ++
Sbjct: 196 YRVISGHL---GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167
V+ + +++ D +++ W ++ ++H
Sbjct: 253 VSTRSPY--LFSCGEDKQVKCWDLEYNKVIRH 282
Score = 44 (20.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 325 LQGHTHAVMCLASVANYV-ISGSADSTSRVW 354
L GH + LA A+ V +SG+ + T +W
Sbjct: 408 LSGHNAIINTLAVNADGVLVSGADNGTMHLW 438
Score = 39 (18.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 105 IYTGSDSNVIRIW 117
I TGS IR+W
Sbjct: 344 IITGSHDTTIRLW 356
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 44/189 (23%), Positives = 81/189 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H + S++ + L SAS D+T+K+W T++ HS+ + +++ + D L +
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHK 312
++ D+TV++W + +L TL V+ + W
Sbjct: 355 SASDSTVKIW------DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 313 GWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG 370
G + LQ+ L+GH V + + + + S S DST ++W G ++ L G
Sbjct: 409 G--TGSLQH--TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW---DTGTGSLQHTLEG 461
Query: 371 HRGPIRCAI 379
HR +R I
Sbjct: 462 HRDWVRSVI 470
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H + S+ + L SAS D T+K+W T++ H + + +++ + D +L
Sbjct: 337 HSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
SASDD+TV++W + +L TL V+ + W
Sbjct: 396 SASDDSTVKIW------DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Query: 312 KGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDG-RHTM 364
G + LQ+ L+GH V + + + + S S D T R+W E+ +HT+
Sbjct: 450 TG--TGSLQH--TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL 501
Score = 121 (47.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 40/175 (22%), Positives = 72/175 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H + S+ + L SAS D T+K+W T++ H + + +++ + D +L
Sbjct: 378 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
SASDD+TV++W + +L TL V+ + W
Sbjct: 438 SASDDSTVKIW------DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Query: 312 KGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDG-RHT 363
+ + + L+GH+ V + + + + S S D T R+W E +HT
Sbjct: 492 ----TEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHT 542
Score = 74 (31.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/111 (19%), Positives = 51/111 (45%)
Query: 84 CISSVLKKDGQILCIAVGNG--FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
C+ ++ + +L ++ + + + SD ++IW + L+ + +V ++ S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 142 HD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMM 191
HD R+ A+ D +++W T ++H T+ VR++I D +
Sbjct: 348 HDSRLLASASDSTVKIW-DTGTGSLQH----TLEGHRDWVRSVIFSHDSQL 393
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 128 (50.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 51/204 (25%), Positives = 83/204 (40%)
Query: 83 RCISSVLKKDGQILCIA---VGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
RC +S+ IL + V + + +GS + RIW T LK TS V+A+
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 140 VSHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPI 197
S + A G D +R+W + K G A+ + G K + +
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDA---------------KKGQALGAPLKGHVKWITSLAWE 243
Query: 198 TSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDA 257
L SAS D T+++W + + + H + + G +Y++S D
Sbjct: 244 PYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDR 303
Query: 258 TVRVWRRYFYSENQLHTLILTLTA 281
T++VW +Q TLI TL+A
Sbjct: 304 TIKVWN------SQTGTLIQTLSA 321
Score = 119 (46.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 95 ILCIAVG-NG-FIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDRVYAAYGD 151
+L ++ NG I TGS N +RIW + G LK + ++ Y
Sbjct: 194 VLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEP---YHLQQS 250
Query: 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211
G R+ ++ D+ V+ + I K V + G H G +T + +Y+
Sbjct: 251 GHPRLASASKDSTVRIWDV--ISKRADIV---LSG------HKGSVTCVRWG-GTGKIYT 298
Query: 212 ASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRV 261
+S D+TIKVW + I+T+ AH+ +N L ++ D +L +A D T +V
Sbjct: 299 SSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKV 348
Score = 65 (27.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 312 KGWFSAQLQYGGALQGHTHAVM--CLASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369
K W ++ L+GH AV C ++ + ++S S D+T +VW + G+ + L
Sbjct: 430 KLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVW-NVRTGK--LSEDLP 486
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GH+ + F + + + +G D +++WR
Sbjct: 487 GHKDEV---------FAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 53 (23.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI-RCAIAFLGRFGEETEDEYCTICTG 399
Y+ S D+ ++W +DG+ + L GH G + +C + R + +
Sbjct: 419 YIASAGFDNHVKLW-NGRDGK--FITTLRGHVGAVYQCCFSADSRL----------LVSS 465
Query: 400 SLDGVLKMWRVTRPKSS 416
S D LK+W V K S
Sbjct: 466 SKDTTLKVWNVRTGKLS 482
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 130 (50.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H ++ + S D L S+S DKTIKVW CI+T+ H + + + V++DG +
Sbjct: 189 HDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIA 248
Query: 252 SASDDATVRVW 262
S S+D T++ W
Sbjct: 249 SCSNDQTIKTW 259
Score = 60 (26.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 335 LASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF--LGRF 385
L Y+ +GS D T ++W GR LA +GH +R A+ F G+F
Sbjct: 312 LVGQCGYLATGSRDKTIKIWELAT-GR--CLATYIGHDNWVR-AVRFHPCGKF 360
Score = 52 (23.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 326 QGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ HTH + CL + ++ +G D +VW
Sbjct: 386 EAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 50 (22.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 327 GHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
GH + V + +++S D T RVW Q GR + + H I C + F
Sbjct: 344 GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ-GR-CIKTINEAHTHFISC-LDFC-- 398
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRV 410
+ + I TG +D V+K+W++
Sbjct: 399 ----LHNPH--IATGGVDDVIKVWKL 418
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 396 ICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ TGS D +K+W + + ++ N
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDN 347
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 94 QILC--IAVGNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMVVAMEVSH--DRV 145
Q++C + G F+ TGS ++IR++ QPE + L++ T V +++ SH DR
Sbjct: 323 QMICSSFSAGGMFLATGSTDHIIRVYYFGGGQPE--KISELESHTDKVDSIQFSHSGDRF 380
Query: 146 YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS 205
+ DG R+W+ + + + L K G N +DK+ K +T +A + +
Sbjct: 381 VSGSRDGTARIWQLQQQDW-RSILLDMATKLPGKY-NPPPLEDKVTKLK--VTMVAWDCN 436
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRVW 262
D+T+ +A+ + T+KVW I + H + + L D VL+SA D VW
Sbjct: 437 DNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFDSRVLFSAGHDGNAIVW 495
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H G + S+ + +L +AS D++IK+W + K I T++ H+ +
Sbjct: 91 VKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCA 150
Query: 243 VVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ DG ++ S SDD TV++W S +HT YS
Sbjct: 151 RFSPDGQLMVSVSDDRTVKLWDAS--SRQLIHTFCEP--GGYS--SYVDFHPSSTCIATA 204
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQD 359
+ W + Y Q H+ AV L+ N++++ S+DST ++ +
Sbjct: 205 SSDNTVRVWDIRTHTLLQHY----QVHSAAVNALSFHPSGNHLLTASSDSTLKILDL-LE 259
Query: 360 GRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388
GR +L L GH+G C ++F R G++
Sbjct: 260 GR--LLYTLHGHQGSASC-VSF-SRSGDQ 284
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 121 (47.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 35/99 (35%), Positives = 58/99 (58%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET-IQAHSEPINALVVADDG-VL 250
H ITS+ + + L SAS D+TI++W I D + + +AH+ P+ ++ + DG L
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
SAS+D +++VW +R+ YS + HT + AK+SP
Sbjct: 118 ASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRC-AKFSP 154
Score = 117 (46.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 186 GKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
GK K H P+ S+ + L SAS DK+IKVW + + + ++ H+ +
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKF 152
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG ++ S S+D T+++W
Sbjct: 153 SPDGRLIVSCSEDKTIKIW 171
Score = 106 (42.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY- 251
H G + ++ + S + L +AS D T+K+ + + + I T+Q H+ P+ + + G L+
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFT 286
Query: 252 SASDDATVRVWRRYF 266
S DA V +WR F
Sbjct: 287 SGGADAQVLLWRTNF 301
Score = 79 (32.9 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+ S S DKTIK+W + +C+ N + +G + SA D TV++W
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 71 (30.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ V C++ NY+I+ S+D T ++ +GR ++ L GH GP+ ++F
Sbjct: 225 QVHSGGVNCVSFHPSGNYLITASSDGTLKILDL-LEGR--LIYTLQGHTGPV-FTVSF-S 279
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ GE +G D + +WR + + ++K N
Sbjct: 280 KGGE-------LFTSGGADAQVLLWRTNFDELNYKDVSKRN 313
Score = 58 (25.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 100 VGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIRVW 157
+GN + + S IR+W + + KA T+ V +++ S D + A D I+VW
Sbjct: 71 LGN-LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 113 (44.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGVLY 251
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG +
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 252 -SASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD T++VW +++ +S +Q H + AK+SP
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQ-H-INWVRCAKFSP 186
Score = 112 (44.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW +R + ++ Q HS +NAL G L
Sbjct: 216 EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 275
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 276 VTASSDSTLKI 286
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
I G+ + + H + S+ + +AS DKTIKVW K + ++ H +
Sbjct: 123 IKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCA 182
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 183 KFSPDGRLIVSASDDKTVKLW 203
Score = 76 (31.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+++ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 257 QLHSAAVNALSFHPSGNYLVTASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 312
Query: 382 LGR-FGEETEDEYCTICTGSLDGVL--KMWRVTRPKSS 416
G F DE + + D + ++ RV RP ++
Sbjct: 313 TGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPAT 350
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +C+ + H + + G
Sbjct: 172 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 231
Query: 250 LYSASD-DATVRVW--RRYFYSEN-QLHT 274
+A+ D TV+VW R + ++ QLH+
Sbjct: 232 CVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGK-IRVWR 158
G F+ T SD I++W L + V + S D R+ + D K +++W
Sbjct: 146 GQSFV-TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 159 ST 160
T
Sbjct: 205 KT 206
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYA 147
KD + C+ +G + +GS +RIW E +A T+ V ++ D + +
Sbjct: 92 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFV 150
Query: 148 AYGDGK-IRVW 157
D K I+VW
Sbjct: 151 TASDDKTIKVW 161
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 116 (45.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET-IQAHSEPINALVVADDG-VL 250
H +TS+ + + L SAS D+T+++W I D + + +AH+ P+ ++ + DG L
Sbjct: 59 HKDVVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 251 YSASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+AS+D +++VW +R+ YS + HT + AK+SP
Sbjct: 118 ATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRC-AKFSP 154
Score = 114 (45.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 186 GKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
GK K H P+ S+ + L +AS DK+IKVW + + + ++ H+ +
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKF 152
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG ++ S S+D T+++W
Sbjct: 153 SPDGRLIVSCSEDKTIKIW 171
Score = 102 (41.0 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + ++ + S + + +AS D T+K+ + + + I T+Q H+ P+ + + G L+S
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFS 286
Query: 253 ASD-DATVRVWRRYF 266
+ D V +WR F
Sbjct: 287 SGGADTQVLLWRTNF 301
Score = 76 (31.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ V C++ NY+I+ S+D T ++ +GR ++ L GH GP+ ++F
Sbjct: 225 QVHSGGVNCVSFHPSGNYIITASSDGTLKILDL-LEGR--LIYTLQGHTGPV-FTVSF-S 279
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ GE +G D + +WR +C + K N
Sbjct: 280 KGGE-------LFSSGGADTQVLLWRTNFDYLNCKDMIKRN 313
Score = 76 (31.8 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+ S S DKTIK+W + +C+ N + +G + SA D TV++W
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 57 (25.1 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 100 VGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIRVW 157
+GN + + S +R+W + + KA T+ V +++ S D + A D I+VW
Sbjct: 71 LGN-LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 114 (45.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGVLY 251
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG +
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 252 -SASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +++ +S +Q H + AK+SP
Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQ-H-INWVRCAKFSP 155
Score = 113 (44.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW +R + ++ Q HS +NAL G L
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 244
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 245 VTASSDSTLKI 255
Score = 104 (41.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ + +AS DKT+KVW K + ++ H +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCA 151
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 152 KFSPDGRLIVSASDDKTVKLW 172
Score = 76 (31.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+++ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 226 QLHSAAVNALSFHPSGNYLVTASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 281
Query: 382 LGR-FGEETEDEYCTICTGSLDGVL--KMWRVTRPKSS 416
G F DE + + D V ++ RV RP ++
Sbjct: 282 TGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPAT 319
Score = 76 (31.8 bits), Expect = 0.00030, Sum P(3) = 0.00029
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +C+ + H + + G
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 250 LYSASD-DATVRVW--RRYFYSEN-QLHT 274
+A+ D TV+VW R + ++ QLH+
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYA 147
KD + C+ +G + +GS +RIW E +A T+ V ++ D + +
Sbjct: 61 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV 119
Query: 148 AYGDGK-IRVW 157
D K ++VW
Sbjct: 120 TASDDKTVKVW 130
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 61/293 (20%), Positives = 122/293 (41%)
Query: 82 YRCISSVLKKDGQILCIAV-GNG-FIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V G +++GS I++W +C + L+ +V+A+
Sbjct: 355 FKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLAL 414
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ +++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 415 CIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 474
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ S + LYS S +TIK+W IR +C+ +Q + +
Sbjct: 475 VGTELKLKKELTGLNHWVRALVASQNHLYSGSY-QTIKIWDIRSLECVHVLQTSGGSVYS 533
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 534 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 590
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 591 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 110 (43.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 188 DKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VAD 246
++M H + + + + SAS DK++++WR D + + T + H + + + AD
Sbjct: 369 ERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSAD 428
Query: 247 DGVLYSASDDATVRVW 262
++ S S D+T++VW
Sbjct: 429 SRLIVSGSKDSTLKVW 444
Score = 109 (43.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 39/153 (25%), Positives = 61/153 (39%)
Query: 207 DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSASDDATVRVWRRY 265
++L S S D T+ +WR +KC+E + H +N + + D ++ SAS D +VR+WR
Sbjct: 346 ESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRA- 404
Query: 266 FYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQ-YGGA 324
S+ Q + T V + W S Q +
Sbjct: 405 --SDGQY---MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW-----SVQTKKLAQE 454
Query: 325 LQGHTHAVMCL--ASVANYVISGSADSTSRVWA 355
L GH V + A + V SG D ++WA
Sbjct: 455 LPGHADEVFGVDWAPDGSRVASGGKDKVIKLWA 487
Score = 101 (40.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWR 263
L SAS D ++W ++ +C+ I H+ + A+ G++Y++S D TV++WR
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWR 278
Score = 92 (37.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
W ++ QY +GH AV +A A+ ++SGS DST +VW+ + + L GH
Sbjct: 402 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK---KLAQELPGH 458
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
+ FG + + + +G D V+K+W
Sbjct: 459 ADEV---------FGVDWAPDGSRVASGGKDKVIKLW 486
Score = 82 (33.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
H +T++ + +Y++S D+T+K+WR D T H+ +N + ++ D VL
Sbjct: 250 HTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVL 306
Score = 62 (26.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 314 WFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
W + Q + + GH + V + + + S S D + R+W R DG++ +A GH
Sbjct: 360 WRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW-RASDGQY--MATFRGH 416
Query: 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC---GHLNKTNGHEY 428
+ +A+ + D I +GS D LK+W V K + GH ++ G ++
Sbjct: 417 VQAVY-TVAW-------SADSRL-IVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW 467
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/64 (20%), Positives = 26/64 (40%)
Query: 83 RCISSVLKKDGQILCIAVGN-GFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
+C+ ++ + + G G IYT S +++W+ + C V + +S
Sbjct: 242 QCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALS 301
Query: 142 HDRV 145
D V
Sbjct: 302 TDYV 305
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 56/230 (24%), Positives = 94/230 (40%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
I G+ + K H + S+ + L +AS DK++KVW + K + ++ H+ +
Sbjct: 91 IKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCA 150
Query: 243 VVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ DG ++ S DD TVR+W + H I T
Sbjct: 151 RFSPDGRLIASCGDDRTVRLW------DTSSHQCINIFTDYGGSATFVDFNSSGTCIASS 204
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQD 359
I W + +Q+ + H V C + NY+ISGS+DST ++ +
Sbjct: 205 GADNTIKIWDIRT-NKLIQH---YKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL-LE 259
Query: 360 GRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409
GR ++ L GH+GP+ + F R G+ +G D + MW+
Sbjct: 260 GR--LIYTLHGHKGPV-LTVTF-SRDGD-------LFASGGADSQVLMWK 298
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 39/168 (23%), Positives = 67/168 (39%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
++ H GP+ S + + S+S D +I++W + SKC+ ++ H + + + D
Sbjct: 63 RLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDS 122
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
L S D VW S ++H L+ ++ +
Sbjct: 123 KQLASGGWDKRAIVWE--VQSGRRVHLLV----GHCDSIQSSDFSPTSDSLATGSWDSTV 176
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLA-SVANYVISGSADSTSRVW 354
H W + + Y L+GHT + CL S + + SGS D T VW
Sbjct: 177 HIWDLRASTPVVSYHN-LEGHTGNISCLCYSASGLLASGSWDKTICVW 223
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 140 (54.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 123 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 182
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 183 LIASCSNDQTVRVW 196
Score = 44 (20.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 269 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 323
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 324 ----HKTAP-Y--VVTGSVDQTVKVW 342
Score = 40 (19.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 246 LLSGSRDKTIKMWDVS 261
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 41/168 (24%), Positives = 69/168 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H ITS+ ++ + L +AS D + +W + H + + ++ + G +L
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLA 76
Query: 252 SASDDATVRVW---RRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIH 308
SAS D TVR+W +R +SE + HT +PV+ I
Sbjct: 77 SASRDRTVRLWIPDKRGKFSEFKAHT---------APVRSVDFSADGQFLATASEDKSIK 127
Query: 309 YWHKGWFSAQLQYGGALQGHTHAVMC--LASVANYVISGSADSTSRVW 354
W + + Y +L HTH V C + ++S S D T ++W
Sbjct: 128 VW--SMYRQRFLY--SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 110 (43.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 186 GKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
GK K H P+ S+ + L +AS DK+IKVW + + + ++ H+ +
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG ++ S S+D T+++W
Sbjct: 153 SPDGRLIVSCSEDKTIKIW 171
Score = 107 (42.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY- 251
H G + I+ + S + L +AS D T+K+ + + + I T+Q H+ P+ + + G L+
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 252 SASDDATVRVWRRYFYSENQLHTLILT 278
S D V +WR F ++LH LT
Sbjct: 287 SGGADTQVLLWRTNF---DELHCKGLT 310
Score = 81 (33.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
Q H+ V C++ NY+I+ S+D T ++ +GR ++ L GH GP+ ++F
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASSDGTLKILDL-LEGR--LIYTLQGHTGPV-FTVSF-S 279
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ GE +G D + +WR + C L K N
Sbjct: 280 KGGE-------LFASGGADTQVLLWRTNFDELHCKGLTKRN 313
Score = 77 (32.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 209 LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+ S S DKTIK+W + +C+ N + G + SA D TV+VW
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 101 GNGFIYTGSDSNVIRIW---KQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG--DGKIR 155
GN + + S +R+W K+ +F+E KA T+ V +++ S D + A D I+
Sbjct: 72 GN-LLASASRDRTVRLWIPDKRGKFSE---FKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 156 VW 157
VW
Sbjct: 128 VW 129
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 110 (43.8 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S++++ T S + D + K+W IRD C ++ H INA+ G ++
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 68 (29.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 25/89 (28%), Positives = 37/89 (41%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
L H + + + SVA +++G D VW + GR VL GH + C
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRS---GVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D L++W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLRIW 339
Score = 59 (25.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS R+W
Sbjct: 297 WDALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM +D + +A DGK+ +W S N + + L
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPL 95
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 110 (43.8 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S++++ T S + D + K+W IRD C ++ H INA+ G ++
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 68 (29.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 25/89 (28%), Positives = 37/89 (41%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
L H + + + SVA +++G D VW + GR VL GH + C
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D L++W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLRIW 339
Score = 59 (25.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS R+W
Sbjct: 297 WDALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM +D + +A DGK+ +W S N + + L
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPL 95
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 112 (44.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 25/89 (28%), Positives = 50/89 (56%)
Query: 176 TGGAVRNLIV---GKDKMMK----HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC 228
TGGA +N++V +++++ H ++S+ + + ++SAS D TI+VW + C
Sbjct: 240 TGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNC 299
Query: 229 IETIQAHSEPINALVVADDG-VLYSASDD 256
++ ++AH + L + G L S+S+D
Sbjct: 300 VQVVRAHESAVTGLSLHATGDYLLSSSED 328
Score = 91 (37.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 18/68 (26%), Positives = 42/68 (61%)
Query: 197 ITSIAINVSD-DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD-DGVLYSAS 254
I S+ + +D + + + DK + V+ R+ + + T++ H++ +++++ V++SAS
Sbjct: 225 ILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSAS 284
Query: 255 DDATVRVW 262
D+T+RVW
Sbjct: 285 SDSTIRVW 292
Score = 79 (32.9 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 314 WFSAQLQYGGALQGHTHAVM-CLASVANY----VI--SGSADSTSRVWAREQDGRHTMLA 366
W + +Q G L T C + A + +I +G+ DS ++W ++ T +A
Sbjct: 331 WAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKE---RTNVA 387
Query: 367 VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415
GH GP+ AIAF +E+ Y + TG+ D LK+W + + K+
Sbjct: 388 NFPGHSGPVT-AIAF-------SENGYY-LATGAQDSSLKLWDLRKLKN 427
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 146 (56.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 51/171 (29%), Positives = 71/171 (41%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
K H S+A + + +AS D IKVW I C+ T + H+ + A+ A G
Sbjct: 340 KQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRG 399
Query: 249 -VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
V++S+S D TVR W Y T T +++ + I
Sbjct: 400 QVMFSSSLDGTVRAWDLIRY--RNFRTFTGTERIQFNCL--AVDPSGEVVCAGSLDNFDI 455
Query: 308 HYWHKGWFSAQL-QYGGALQGHTHAVMCLA-SVANYVI-SGSADSTSRVWA 355
H W S Q Q AL GH V CL+ S N V+ S S D T R+W+
Sbjct: 456 HVW-----SVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWS 501
Score = 49 (22.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKT-----SMVVAMEVSHD--RVYAAYGDGKIRV 156
FI T S +IW +E L A T V+ SHD ++Y DG + V
Sbjct: 160 FILTTSKDLSAKIWSVD--SEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFV 217
Query: 157 WRST 160
W T
Sbjct: 218 WEFT 221
Score = 48 (22.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 108 GSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKI 154
G S R++ P+FT +L + V + V+ + A+G K+
Sbjct: 278 GFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKL 324
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 147 (56.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 379 KGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQ 438
Query: 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXX 305
+ LYS S D T+ VW + Q + T+ A +PV
Sbjct: 439 GNK-LYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSLK 488
Query: 306 XIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
I W +L+ L G H V L + NY+ SGS T ++W
Sbjct: 489 AIKVWDI--VGTELKLKKELTGLNHWVRALVASQNYLYSGSYQ-TIKIW 534
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/292 (19%), Positives = 122/292 (41%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 376 FKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 435
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ +++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 436 CIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 495
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ S + LYS S +TIK+W IR+ +C+ +Q + +
Sbjct: 496 VGTELKLKKELTGLNHWVRALVASQNYLYSGSY-QTIKIWDIRNLECVHVLQTSGGSVYS 554
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW ++ Q+ TL + Y+
Sbjct: 555 IAVTNHHIVCGTYENL-IHVWD--IETKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 611
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRV 353
+ W + L H +V LA + SG+ DST +V
Sbjct: 612 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 52/226 (23%), Positives = 91/226 (40%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-A 245
K + H I+ +A + L SAS DKT+KVW +R KC++T++ HS+ +
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXX 305
++ S S D +V++W E + + TL+A P+
Sbjct: 134 PSNLIVSGSFDESVKIW------EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDG 187
Query: 306 XIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV-ANYVISGSADSTSRVWAREQDGRHTM 364
W S Q A +G+ S Y+++ + D+T ++W + GR
Sbjct: 188 LCRIWDAA--SGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR-GR--C 242
Query: 365 LAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
L GH+ C A G + + +GS D ++ +W +
Sbjct: 243 LKTYTGHKNEKYCLFASFSVTGRKW------VVSGSEDNMVYIWNL 282
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/214 (24%), Positives = 87/214 (40%)
Query: 149 YGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD-KMMK-HMGPITSIAINVSD 206
YG + + W + + A+ KT V ++ GK K +K H + N
Sbjct: 78 YGHS-LEISDVAWSSDSSRLVSASDDKTL-KVWDMRSGKCLKTLKGHSDFVFCCDFNPPS 135
Query: 207 DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRY 265
+ + S S D+++K+W ++ KC++T+ AHS+PI+A+ +G ++ S S D R+W
Sbjct: 136 NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA 195
Query: 266 FYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGAL 325
S L TL PV + W Y
Sbjct: 196 --SGQCLRTLA---DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY---- 246
Query: 326 QGHTHAVMCL-ASVA----NYVISGSADSTSRVW 354
GH + CL AS + +V+SGS D+ +W
Sbjct: 247 TGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Score = 110 (43.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H I+S+ + + + L S++ D I +W D C +T+ HS I+ + + D L
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 252 SASDDATVRVW 262
SASDD T++VW
Sbjct: 98 SASDDKTLKVW 108
Score = 66 (28.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 325 LQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L H+ + + N ++SGS D R+W G+ L L P ++F+
Sbjct: 161 LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS-GQ--CLRTLADEGNP---PVSFV 214
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMWRVTRP---KSSCGHLNK 422
+F +Y I T +LD LK+W +R K+ GH N+
Sbjct: 215 -KFSPN--GKY--ILTATLDNTLKLWDYSRGRCLKTYTGHKNE 252
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 114 (45.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGVLY 251
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG +
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 252 -SASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +++ +S +Q H + AK+SP
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQ-H-INWVRCAKFSP 117
Score = 109 (43.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW +R + ++ Q HS +N L G L
Sbjct: 147 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL 206
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 207 ITASSDSTLKI 217
Score = 104 (41.7 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ + +AS DKT+KVW K + ++ H +
Sbjct: 54 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCA 113
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 114 KFSPDGRLIVSASDDKTVKLW 134
Score = 76 (31.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +C+ + H + + G
Sbjct: 103 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 162
Query: 250 LYSASD-DATVRVW--RRYFYSEN-QLHT 274
+A+ D TV+VW R + ++ QLH+
Sbjct: 163 CIAAAGMDNTVKVWDVRTHRLLQHYQLHS 191
Score = 72 (30.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+I+ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 188 QLHSAAVNGLSFHPSGNYLITASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 243
Query: 382 LGR-FGEETEDEYCTICTGSLDGVL--KMWRVTRPK----SSCGHL 420
G F DE + + D V ++ +V RP SS G+L
Sbjct: 244 TGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNL 289
Score = 49 (22.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYA 147
KD + C+ +G + +GS +RIW E +A T+ V ++ D + +
Sbjct: 23 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV 81
Query: 148 AYGDGK-IRVW 157
D K ++VW
Sbjct: 82 TASDDKTVKVW 92
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 144 (55.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 59/263 (22%), Positives = 101/263 (38%)
Query: 121 EFTECGRLKAKTSM---VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
+F+ CG+ +S V + H K+ V W + + V A+ KT
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 178 GAVRNLIVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS 236
+ K +K H + N + S S D+++++W ++ CI+T+ AHS
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHS 213
Query: 237 EPINALVVADDGVLY-SASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKXXXXXXX 294
+P++A+ DG L S S D VR+W + Q + TL+ + PV
Sbjct: 214 DPVSAVSFNRDGSLIASGSYDGLVRIWDT---ANGQCIKTLV---DDENPPVAFVKFSPN 267
Query: 295 XXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSR 352
+ W QY G + + + SV ++ISGS D
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH-ENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 353 VWAREQDGRHTMLAVLVGHRGPI 375
+W + ++ L GH P+
Sbjct: 327 IWNLQT---REIVQCLEGHTQPV 346
Score = 96 (38.9 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H I+S + L ++S DKT+K+W + C T+ H +N + + D +
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVV 145
Query: 252 SASDDATVRVW 262
SASDD T++++
Sbjct: 146 SASDDKTLKIF 156
Score = 83 (34.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 325 LQGHTHAVMC--LASVANYVISGSADSTSRVWAREQDGRHTM-LAVLVGHRGPIRCAIAF 381
L+GH + V C ++ V+SGS D + R+W D + M + L H P+ A++F
Sbjct: 167 LKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW----DVKTGMCIKTLPAHSDPVS-AVSF 221
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMW 408
R G I +GS DG++++W
Sbjct: 222 -NRDGS-------LIASGSYDGLVRIW 240
Score = 63 (27.2 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+ SGS D R+W +G+ + LV P +AF+ +F +Y I +L
Sbjct: 228 IASGSYDGLVRIWDTA-NGQ--CIKTLVDDENP---PVAFV-KFSPN--GKY--ILASNL 276
Query: 402 DGVLKMWRVTRPKSSCGHLNKTNGHE 427
D LK+W ++ K+ L + GHE
Sbjct: 277 DSTLKLWDFSKGKT----LKQYTGHE 298
Score = 39 (18.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 22 APSTFLRSISTKEPSFSTFPYSPPRFSSPISLHTSPLSSPRH 63
APST SIS P+ + P + + +P + S S +
Sbjct: 36 APSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANY 77
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 144 (55.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 59/263 (22%), Positives = 101/263 (38%)
Query: 121 EFTECGRLKAKTSM---VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
+F+ CG+ +S V + H K+ V W + + V A+ KT
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 178 GAVRNLIVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS 236
+ K +K H + N + S S D+++++W ++ CI+T+ AHS
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHS 213
Query: 237 EPINALVVADDGVLY-SASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKXXXXXXX 294
+P++A+ DG L S S D VR+W + Q + TL+ + PV
Sbjct: 214 DPVSAVSFNRDGSLIASGSYDGLVRIWDT---ANGQCIKTLV---DDENPPVAFVKFSPN 267
Query: 295 XXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSR 352
+ W QY G + + + SV ++ISGS D
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH-ENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 353 VWAREQDGRHTMLAVLVGHRGPI 375
+W + ++ L GH P+
Sbjct: 327 IWNLQT---REIVQCLEGHTQPV 346
Score = 96 (38.9 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H I+S + L ++S DKT+K+W + C T+ H +N + + D +
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVV 145
Query: 252 SASDDATVRVW 262
SASDD T++++
Sbjct: 146 SASDDKTLKIF 156
Score = 83 (34.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 325 LQGHTHAVMC--LASVANYVISGSADSTSRVWAREQDGRHTM-LAVLVGHRGPIRCAIAF 381
L+GH + V C ++ V+SGS D + R+W D + M + L H P+ A++F
Sbjct: 167 LKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW----DVKTGMCIKTLPAHSDPVS-AVSF 221
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMW 408
R G I +GS DG++++W
Sbjct: 222 -NRDGS-------LIASGSYDGLVRIW 240
Score = 63 (27.2 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+ SGS D R+W +G+ + LV P +AF+ +F +Y I +L
Sbjct: 228 IASGSYDGLVRIWDTA-NGQ--CIKTLVDDENP---PVAFV-KFSPN--GKY--ILASNL 276
Query: 402 DGVLKMWRVTRPKSSCGHLNKTNGHE 427
D LK+W ++ K+ L + GHE
Sbjct: 277 DSTLKLWDFSKGKT----LKQYTGHE 298
Score = 39 (18.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 22 APSTFLRSISTKEPSFSTFPYSPPRFSSPISLHTSPLSSPRH 63
APST SIS P+ + P + + +P + S S +
Sbjct: 36 APSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANY 77
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 292 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 350
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 351 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 408
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 409 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 468
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 469 LKDN-ILVSGNADSTVKIW 486
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 255 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 313
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 373
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 374 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 431
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 432 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 485
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 486 WDIKTGQCLQTLQ--GPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 108 (43.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 337 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 392
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 393 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 428
Score = 55 (24.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR + K + ++ H + + + + S SDD T++VW
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 286
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 392
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 450
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 451 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 511 LKDN-ILVSGNADSTVKIW 528
Score = 135 (52.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 297 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 355
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 415
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 416 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 473
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 474 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 527
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 528 WDIKTGQCLQTLQ--GPSK-HQSAVTCLQFNKNFVITSSDDGTVKLW 571
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 151 (58.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 61/211 (28%), Positives = 94/211 (44%)
Query: 94 QILCIAVGNG--FIYTGSDSNVIRIWKQ-PEFTE-CGRLKAKTSMVVAMEVSHD----RV 145
QI C + +G FI TGS +VIRI+ E E L++ T VVA++ ++ R
Sbjct: 177 QISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRF 236
Query: 146 YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS 205
+ DG R+W+ K + L K G NL G+DK+ K +T +A +
Sbjct: 237 VSGSRDGTARIWQYQQQEW-KSIVLDMATKMTG--NNLPSGEDKVTKLK--VTMVAWDRY 291
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRVW- 262
D T+ +A + +KVW + + T+ H + + L D ++ SA D + VW
Sbjct: 292 DTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFVWD 351
Query: 263 -------RRYFYS-ENQLHTLILTLTAKYSP 285
R YF E Q H + K+SP
Sbjct: 352 LDRGTKIRNYFNMIEGQGHGAVFD--CKFSP 380
Score = 109 (43.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 57/259 (22%), Positives = 102/259 (39%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD--GV- 249
H I+ +A+N + + + S DK ++VW +R + +Q HS I ++ G
Sbjct: 78 HSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTT 137
Query: 250 --LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
L S D T+ W+ + + + T + P
Sbjct: 138 RYLTSTGADGTICFWQ-WHVKTMKFKDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTD 196
Query: 308 HYWHKGWFSAQLQYGGA-LQGHTHAVMCLASVAN----YVISGSADSTSRVWA-REQDGR 361
H + +++ A L+ HT V+ + N +SGS D T+R+W ++Q+ +
Sbjct: 197 HVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWK 256
Query: 362 HTMLAV---LVGHRGPI-RCAIAFLGRFGEETEDEY-CTICTGSLDGVLKMWRVTRPKSS 416
+L + + G+ P + L + D Y T+ T + +LK+W S
Sbjct: 257 SIVLDMATKMTGNNLPSGEDKVTKL-KVTMVAWDRYDTTVITAVNNFLLKVWN-----SI 310
Query: 417 CGHLNKT-NGH--EYFELQ 432
G L T +GH E F L+
Sbjct: 311 TGQLLHTLSGHDDEVFVLE 329
Score = 75 (31.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 95 ILCIAVGNGF--IYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG-- 150
+ C+A I+TGSD +++IW + L+ ++ + M V+++ A G
Sbjct: 40 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSC 99
Query: 151 DGKIRVW 157
D +RVW
Sbjct: 100 DKVVRVW 106
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 332 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 390
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 391 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 448
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 449 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 508
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 509 LKDN-ILVSGNADSTVKIW 526
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 295 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 353
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 413
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 414 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 471
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 472 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 525
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 526 WDIKTGQCLQTLQ--GPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 108 (43.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 377 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 432
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 433 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 468
Score = 55 (24.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR + K + ++ H + + + + S SDD T++VW
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 326
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 392
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 450
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 451 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 511 LKDN-ILVSGNADSTVKIW 528
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 297 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 355
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 415
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 416 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 473
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 474 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 527
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 528 WDIKTGQCLQTLQ--GPSK-HQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 108 (43.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 379 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 434
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 435 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 470
Score = 55 (24.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR + K + ++ H + + + + S SDD T++VW
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 328
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 148 (57.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 62/282 (21%), Positives = 114/282 (40%)
Query: 84 CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME-VSH 142
C+ ++ G I N + G+ S V+ I T+ +KA + ++ + +
Sbjct: 439 CLRTIDSGYGLCSLIVPQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPN 498
Query: 143 DRVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIA 201
D + D +++ W + VK K+G A + L V K MK + ++A
Sbjct: 499 DSGFVTVSADHEVKFW----EYQVKQ-------KSGKATKKLTVSNVKSMKMNDDVLAVA 547
Query: 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVR 260
I+ + A LD T+KV+ + K ++ H P+ + ++ DG ++ + S D ++
Sbjct: 548 ISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLK 607
Query: 261 VWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQ 320
+W F H I A V + YW F L
Sbjct: 608 IWGLDF---GDCHKSIF---AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLL- 660
Query: 321 YGGALQGHTHAVMCLASVAN---YVISGSADSTSRVWAREQD 359
L+GH + CLA ++N ++++GS D + R W R ++
Sbjct: 661 ---TLEGHHAEIWCLA-ISNRGDFLVTGSHDRSMRRWDRSEE 698
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 140 (54.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H ++S+AI + D + SAS DKTIK+W ++ C++T H E + + DG
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 250 LY-SASDDATVRVW 262
L S S+D TVRVW
Sbjct: 248 LIASCSNDQTVRVW 261
Score = 44 (20.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH + V + S +++S + D T RVW + + M L H + ++ F
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKRCM-KTLNAHEHFVT-SLDF- 388
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T Y + TGS+D +K+W
Sbjct: 389 ----HKTAP-Y--VVTGSVDQTVKVW 407
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 396 ICTGSLDGVLKMWRVT 411
+ +GS D +KMW V+
Sbjct: 311 LLSGSRDKTIKMWDVS 326
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 116 (45.9 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 64 (27.6 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R A
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVRYA 237
Score = 49 (22.3 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 114 (45.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVADDGVLY 251
H +T + + S L S S DKT+++W + + K T+ +AH+ + ++ DG +
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 252 -SASDDATVRVW----RRYFYSENQLHTLILTLTAKYSP 285
+ASDD TV+VW +++ +S +Q H + AK+SP
Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQ-H-INWVRCAKFSP 155
Score = 109 (43.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL 250
+H G +T + + S + +A +D T+KVW +R + ++ Q HS +N L G L
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL 244
Query: 251 YSASDDATVRV 261
+AS D+T+++
Sbjct: 245 ITASSDSTLKI 255
Score = 104 (41.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 184 IVGKDKMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
+ G+ + + H + S+ + +AS DKT+KVW K + ++ H +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCA 151
Query: 243 VVADDG-VLYSASDDATVRVW 262
+ DG ++ SASDD TV++W
Sbjct: 152 KFSPDGRLIVSASDDKTVKLW 172
Score = 76 (31.8 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+ +H+ + + + SAS DKT+K+W +C+ + H + + G
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 250 LYSASD-DATVRVW--RRYFYSEN-QLHT 274
+A+ D TV+VW R + ++ QLH+
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Score = 72 (30.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 326 QGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-- 381
Q H+ AV L+ NY+I+ S+DST ++ +GR +L L GH+GP +AF
Sbjct: 226 QLHSAAVNGLSFHPSGNYLITASSDSTLKILDL-MEGR--LLYTLHGHQGPAT-TVAFSR 281
Query: 382 LGR-FGEETEDEYCTICTGSLDGVL--KMWRVTRPK----SSCGHL 420
G F DE + + D V ++ +V RP SS G+L
Sbjct: 282 TGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNL 327
Score = 49 (22.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 91 KDGQILCIAVG-NGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYA 147
KD + C+ +G + +GS +RIW E +A T+ V ++ D + +
Sbjct: 61 KDA-VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV 119
Query: 148 AYGDGK-IRVW 157
D K ++VW
Sbjct: 120 TASDDKTVKVW 130
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 146 (56.5 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 412 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 470
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 471 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 528
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 529 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 588
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 589 LKDN-ILVSGNADSTVKIW 606
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 375 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 433
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 493
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 494 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 551
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 552 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 605
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 606 WDIKTGQCLQTLQ--GPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 108 (43.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 457 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 512
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 513 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 548
Score = 55 (24.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR + K + ++ H + + + + S SDD T++VW
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 406
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 146 (56.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 417 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 475
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 476 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 533
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 534 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 593
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 594 LKDN-ILVSGNADSTVKIW 611
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/287 (23%), Positives = 115/287 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 380 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 438
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 498
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 499 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 556
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 557 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 610
Query: 308 HYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
G LQ G + H AV CL N+VI+ S D T ++W
Sbjct: 611 WDIKTGQCLQTLQ--GPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 108 (43.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 462 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 517
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 518 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 553
Score = 55 (24.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR + K + ++ H + + + + S SDD T++VW
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 411
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 137 (53.3 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
++ H IT++ + TL SA++D ++KVW + +CI +++ H+ + AL V +D
Sbjct: 314 ELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQV-EDN 372
Query: 249 VLYSASDDATVRVW 262
+L + S DATVR+W
Sbjct: 373 ILATGSRDATVRLW 386
Score = 53 (23.7 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVW 354
L GHT V L ++++GS D + R+W
Sbjct: 542 LVGHTGPVTALQFDNMHLVTGSHDRSIRIW 571
Score = 52 (23.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 345 GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGV 404
G+AD R+W H L VGH GP+ A+ F + + TGS D
Sbjct: 522 GTADGMVRLWDLRSGQVHRNL---VGHTGPVT-ALQF----------DNMHLVTGSHDRS 567
Query: 405 LKMW 408
+++W
Sbjct: 568 IRIW 571
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVW 354
L H V L + ++SGS+D T R W
Sbjct: 435 LSSHMDEVTALHFKGDTLVSGSSDKTIRQW 464
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 146 (56.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 49/199 (24%), Positives = 86/199 (43%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKTSMVVAMEVS 141
+C+ +++ G + + + I +GS +++W E EC L TS V M +
Sbjct: 465 KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLH 523
Query: 142 HDRVYAAYGDGKIRVWRSTWDNGVK----HVKLATIPKTGGAVRNLIVGK-DKMMKHMGP 196
RV + D +RVW + HV + G R ++ G D M+K P
Sbjct: 524 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDP 581
Query: 197 ITSIAINVSD---DTLYS----------ASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
T ++ + +YS SLD +I+VW + CI T+ H + +
Sbjct: 582 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 641
Query: 244 VADDGVLYSASDDATVRVW 262
+ D+ +L S + D+TV++W
Sbjct: 642 LKDN-ILVSGNADSTVKIW 659
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 69/290 (23%), Positives = 116/290 (40%)
Query: 88 VLK--KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHDR 144
VLK D I C+ I +GSD N +++W +C R L T V + ++ +
Sbjct: 428 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNI 486
Query: 145 VYAAYGDGKIRVWRSTWDNGVKHV--KLATIPKTGGAVRNLIVG-KDKMMK--------- 192
+ + D ++VW + + + +T+ + ++ G +D ++
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 546
Query: 193 -H--MGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H MG + ++ + + S + D +KVW C+ T+Q H+ + +L DG
Sbjct: 547 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 604
Query: 249 V-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ + S S D ++RVW + N +HTL T S I
Sbjct: 605 IHVVSGSLDTSIRVWD--VETGNCIHTL----TGHQSLTSGMELKDNILVSGNADSTVKI 658
Query: 308 HYWHKGWFSAQLQYGGALQG-HTH--AVMCLASVANYVISGSADSTSRVW 354
W Q LQG H H AV CL N+VI+ S D T ++W
Sbjct: 659 ------WDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLW 702
Score = 108 (43.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT V C+ V+SGS D+T RVW E G+ L VL+GH +RC + + GR
Sbjct: 510 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVRC-VQYDGR 565
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
+ +G+ D ++K+W +C H + + + + LQ
Sbjct: 566 ----------RVVSGAYDFMVKVW--DPETETCLHTLQGHTNRVYSLQ 601
Score = 59 (25.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 221 WRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
WR D K + ++ H + + + + S SDD T++VW
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 459
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 150 (57.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 60/213 (28%), Positives = 96/213 (45%)
Query: 94 QILCIAVGNG--FIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSHD---- 143
QI C + +G FI TGS +VIRI+ + PE + L++ T VVA++ ++
Sbjct: 320 QISCSSFSSGGMFITTGSTDHVIRIYYLGSEVPE--KIAELESHTDKVVAVQFCNNGDSL 377
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203
R + DG R+W+ K + L K G NL G+DK+ K +T +A +
Sbjct: 378 RFVSGSRDGTARIWQYQQQEW-KSIVLDMATKMTG--NNLPSGEDKITKLK--VTMVAWD 432
Query: 204 VSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRV 261
D T+ +A + +KVW + + T+ H + + L D ++ SA D + +
Sbjct: 433 RYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFI 492
Query: 262 W--------RRYFYS-ENQLHTLILTLTAKYSP 285
W R YF E Q H + K+SP
Sbjct: 493 WDLDRGTKIRNYFNMIEGQGHGAVFD--CKFSP 523
Score = 110 (43.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 58/259 (22%), Positives = 102/259 (39%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD--GV- 249
H I+ +A+N + + + S DK ++VW +R + +Q HS I ++ G
Sbjct: 221 HSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTN 280
Query: 250 --LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
L S D T+ W+ + + + T + P
Sbjct: 281 RYLTSTGADGTICFWQ-WHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTD 339
Query: 308 HYWHKGWFSAQLQYGGA-LQGHTHAVMCLASVAN----YVISGSADSTSRVWA-REQDGR 361
H + +++ A L+ HT V+ + N +SGS D T+R+W ++Q+ +
Sbjct: 340 HVIRIYYLGSEVPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWK 399
Query: 362 HTMLAV---LVGHRGPI-RCAIAFLGRFGEETEDEY-CTICTGSLDGVLKMWRVTRPKSS 416
+L + + G+ P I L + D Y T+ T + +LK+W S
Sbjct: 400 SIVLDMATKMTGNNLPSGEDKITKL-KVTMVAWDRYDTTVITAVNNFLLKVWN-----SI 453
Query: 417 CGHLNKT-NGH--EYFELQ 432
G L T +GH E F L+
Sbjct: 454 TGQLLHTLSGHDDEVFVLE 472
Score = 75 (31.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 95 ILCIAVGNGF--IYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG-- 150
+ C+A I+TGSD +++IW + L+ ++ + M V+++ A G
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSC 242
Query: 151 DGKIRVW 157
D +RVW
Sbjct: 243 DKVVRVW 249
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 144 (55.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 313 KGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 371
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 372 -QGCKLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSL 421
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 422 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 478
Query: 364 M 364
+
Sbjct: 479 L 479
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 60/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 310 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 369
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ ++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 370 CIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 429
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 430 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 488
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 489 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 545
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 546 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 231 KGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 289
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 290 -QGCRLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNLLFSGSL 339
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 340 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 396
Query: 364 M 364
+
Sbjct: 397 L 397
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 61/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 228 FKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 287
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ R+Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 288 CIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDI 347
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 348 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 406
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 407 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 463
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 464 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 161 WDNGVKHVKLATIPKTGGAVRNLIVGKD---KMMK-HMGPITSIAINVSDDTLYSASLDK 216
W G K++ A+ KT +R K + +K H ++SI N L S S D+
Sbjct: 104 WATGSKYLASASDDKT---IRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDE 160
Query: 217 TIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS-ASDDATVRVW 262
T+++W ++D C+ + AHSEPI ++ ++ DG L + AS D R+W
Sbjct: 161 TVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 331 AVMCLASVANYVISGSADSTSRVWA 355
+++ + S+ ++I+ D RVWA
Sbjct: 341 SLLNVTSLGPFIITSGTDPYVRVWA 365
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 197 ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASD 255
I++ A++ +++ + + IK +RI D ++ + H PIN + + G ++ SAS
Sbjct: 90 ISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASS 149
Query: 256 DATVRVW--RRYFYSENQLHTLILTLTAKYSP 285
D TV+VW + + + N H ++T+ K+ P
Sbjct: 150 DKTVKVWDLEKGYCTHNFQHDDVVTML-KFHP 180
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242
K+ K H GPI I I+ S + + SAS DKT+KVW + C Q H + + L
Sbjct: 123 KIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTML 176
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 325 LQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L+GH VM + A+ ++ISGS D ++ +W E + +A L GH G I C +A
Sbjct: 420 LRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLE---KKESIAQLTGHTGVISC-VAL- 474
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCG 418
++ I T S D +K+W+ SS G
Sbjct: 475 ---PKKPSTSMFAI-TASDDRTIKLWKGFSTTSSSG 506
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 348 KGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 406
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 407 -QGCKLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSL 456
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 457 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 513
Query: 364 M 364
+
Sbjct: 514 L 514
Score = 137 (53.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 60/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 345 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 404
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ ++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 405 CIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 464
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 465 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 523
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 524 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 580
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 581 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 389 KGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 447
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 448 -QGCKLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSL 497
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 498 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 554
Query: 364 M 364
+
Sbjct: 555 L 555
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 60/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 445
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ ++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 446 CIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 505
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 506 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 564
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 565 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 621
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 622 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 389 KGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 447
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 448 -QGCKLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNVLFSGSL 497
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 498 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 554
Query: 364 M 364
+
Sbjct: 555 L 555
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 60/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 445
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ ++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 446 CIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVWDI 505
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 506 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 564
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 565 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 621
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 622 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/213 (28%), Positives = 96/213 (45%)
Query: 94 QILCIAVGNG--FIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSHD---- 143
QI C + +G FI TGS +VIRI+ + PE + L++ T VVA++ ++
Sbjct: 257 QISCSSFSSGGMFIATGSTDHVIRIYYLGSESPE--KMAELESHTDKVVAVQFCNNGDSL 314
Query: 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203
R + DG RVW+ K V L K G N+ G+DK+ K +T +A +
Sbjct: 315 RFVSGSRDGTARVWQYHQQEW-KSVVLDMATKMTG--NNVASGEDKVTKLK--VTMVAWD 369
Query: 204 VSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRV 261
D T+ +A + +KVW + + ++ H + + L D ++ SA D + +
Sbjct: 370 RYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDGNIFI 429
Query: 262 W--------RRYFYS-ENQLHTLILTLTAKYSP 285
W R YF E Q H + K+SP
Sbjct: 430 WDIDKGTKIRNYFNMIEGQGHGAVFD--CKFSP 460
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S++++ T S + D + K+W IRD C ++ H INA+ +G ++
Sbjct: 183 HSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFA 242
Query: 253 A-SDDATVRVW 262
SDDAT R++
Sbjct: 243 TGSDDATCRLF 253
Score = 62 (26.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 24/89 (26%), Positives = 36/89 (40%)
Query: 325 LQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
L H + + + SVA +++G D VW + R VL GH + C
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDR---AGVLAGHDNRVSC-- 317
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG D+ + TGS D L++W
Sbjct: 318 --LG-----VTDDGMAVATGSWDSFLRIW 339
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS R+W
Sbjct: 297 WDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM +D + +A DGK+ +W S N + + L
Sbjct: 51 LRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPL 95
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/193 (26%), Positives = 85/193 (44%)
Query: 193 HMGPITSI-AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-L 250
H G + ++ + V + L S S D T+KVW R CI+TI+ P+ A+ +A G +
Sbjct: 134 HAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQV 192
Query: 251 YSASDDATVRVWR-RYFYSENQL--HTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXI 307
+ D +++W R + + L H I+T A + +
Sbjct: 193 FIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLA----ISKDGSSLLSNSMDNTVRIFDV 248
Query: 308 HYWHKGWFSAQLQ---YGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRH 362
K + SAQ Q + GA+ G H ++ +A N +V +GS+D VW+ D R+
Sbjct: 249 ----KPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSATGDLRY 304
Query: 363 TMLAVLVGHRGPI 375
VL GH G +
Sbjct: 305 ----VLPGHEGSV 313
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
K ++ P+T++AI ++ +D IK+W +R++ C ++ H + I +L ++ DG
Sbjct: 172 KTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDG 231
Query: 249 V-LYSASDDATVRVW 262
L S S D TVR++
Sbjct: 232 SSLLSNSMDNTVRIF 246
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R +
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVL 238
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R +
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVL 238
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R +
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVL 238
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|G3V5X7 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0030529
EMBL:AL355075 InterPro:IPR007111 PROSITE:PS50837 HGNC:HGNC:11726
ChiTaRS:TEP1 InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271
Pfam:PF05386 PROSITE:PS51226 Ensembl:ENST00000556935
ArrayExpress:G3V5X7 Bgee:G3V5X7 Uniprot:G3V5X7
Length = 2519
Score = 118 (46.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373
W Q G GH AV +A+V +V+S S D T +VW D + L + H G
Sbjct: 2025 WDPESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDGTLKVW----DHQGVELTSIPAHSG 2080
Query: 374 PI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR---VTRPKSSCGH 419
PI CA A R + E + G LDG ++W V + + GH
Sbjct: 2081 PISHCAAAMEPRAAGQPGSELLVVTVG-LDGATRLWHPLLVCQTHTLLGH 2129
Score = 78 (32.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC---IETIQA-HSEPINALVVADDG 248
H GP++ + + +L + D+++ W +R K I + A H + + D
Sbjct: 1952 HEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDN 2011
Query: 249 VLYSASDDATVRVW 262
+L S S D +V +W
Sbjct: 2012 LLISCSSDGSVGLW 2025
Score = 75 (31.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 189 KMMKHMG-P---ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
K+ K +G P I ++A NV + LD +++W R+ + AH + A +
Sbjct: 1725 KVTKDLGAPGASIRTLAFNVPGGVVAVGRLDSMVELWAWREGARLAAFPAHHGFVAAALF 1784
Query: 245 ADDGV-LYSASDDATVRVW 262
G L +A +D V+VW
Sbjct: 1785 LHAGCQLLTAGEDGKVQVW 1803
Score = 60 (26.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSASDDA 257
S + +SDDTL+ + D +++W ++ + +AH I ++ D +L +
Sbjct: 1614 SACLFLSDDTLFLTAFDGLLELWDLQHGCRVLQTKAHQYQITGCCLSPDCRLLATVCLGG 1673
Query: 258 TVRVW 262
+++W
Sbjct: 1674 CLKLW 1678
Score = 51 (23.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMVVAMEVSHDRVYAAY-G 150
L + G + G D V ++W +P G L ++ VA+ DRV Y
Sbjct: 1783 LFLHAGCQLLTAGEDGKV-QVWSGSLGRPR-GHLGSLSLSPALSVALSPDGDRVAVGYRA 1840
Query: 151 DGKIRVWR-STWDNGVK 166
DG IR+++ S+ G +
Sbjct: 1841 DG-IRIYKISSGSQGAQ 1856
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 148 (57.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/211 (27%), Positives = 93/211 (44%)
Query: 94 QILCIAVGNG--FIYTGSDSNVIRIWKQ-PEFTE-CGRLKAKTSMVVAMEVSHD----RV 145
QI C + +G FI TGS +VIRI+ E E L++ T VVA++ ++ R
Sbjct: 320 QISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRF 379
Query: 146 YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS 205
+ DG R+W+ K + L K G NL +DK+ K +T +A +
Sbjct: 380 VSGSRDGTARIWQYQQQEW-KSIVLDMATKMSG--NNLTSAEDKVTKLK--VTMVAWDRY 434
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRVW- 262
D T+ +A + +KVW + + T+ H + + L D ++ SA D + +W
Sbjct: 435 DTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWD 494
Query: 263 -------RRYFYS-ENQLHTLILTLTAKYSP 285
R YF E Q H + K+SP
Sbjct: 495 LDRGTKIRNYFNMIEGQGHGAVFD--CKFSP 523
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R +
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVRSVL 238
Score = 49 (22.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 327 GHTHAVMCLASVAN-YVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381
GHT V + N Y++ SGS+D T R W E + +++ + G GP+R +I F
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGEPGPVR-SILF 239
Score = 49 (22.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 183 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 238 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 122 (48.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 146 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 200 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 253
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 254 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 288
Score = 119 (46.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 104 SASDDKTLKIW 114
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 186 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 234
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNE 258
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 7 PNPSFAIRETTPTGTAPSTFLR-SISTKEPSFSTFPYSP 44
P PS A ++ PT P+ L+ +++ + S+ +SP
Sbjct: 17 PAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSP 55
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/181 (28%), Positives = 75/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 388 KGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 446
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 447 -QGCKLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNMLFSGSL 496
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + Y+ SGS T ++W R D H
Sbjct: 497 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQTYLYSGSYQ-TIKIWDIRTLDCIHV 553
Query: 364 M 364
+
Sbjct: 554 L 554
Score = 137 (53.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 61/293 (20%), Positives = 120/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 385 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 444
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ ++Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 445 CIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI 504
Query: 185 VGKD-KMMKHMGPITS-IAINVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + + V+ T LYS S +TIK+W IR CI +Q + +
Sbjct: 505 VGTELKLKKELTGLNHWVRALVAAQTYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 563
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 564 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 620
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 621 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
>TAIR|locus:2087921 [details] [associations]
symbol:AT3G18860 "AT3G18860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AP002039 OMA:VSECCRF UniGene:At.21618
UniGene:At.71275 EMBL:AF410311 IPI:IPI00544863 RefSeq:NP_566620.1
ProteinModelPortal:Q9LHN3 SMR:Q9LHN3 PaxDb:Q9LHN3 PRIDE:Q9LHN3
EnsemblPlants:AT3G18860.1 GeneID:821419 KEGG:ath:AT3G18860
TAIR:At3g18860 InParanoid:Q9LHN3 ProtClustDB:CLSN2688542
Genevestigator:Q9LHN3 Uniprot:Q9LHN3
Length = 760
Score = 130 (50.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/86 (34%), Positives = 54/86 (62%)
Query: 180 VRNLIVGKD-KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE 237
V NL+ G++ + +K H +T +AI+ D + S+S+D+T+K WR + + +E+ AH
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVAIDNED--IVSSSVDQTLKRWR--NGQLVESWDAHQS 152
Query: 238 PINALVVADDGVLYSASDDATVRVWR 263
PI A++ G L S S DA++++W+
Sbjct: 153 PIQAVIRLPSGELVSGSSDASLKLWK 178
Score = 59 (25.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 327 GHTHAVMCL-ASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
GHT V + A + ++S S D +++W +DG + + H G I A FL
Sbjct: 228 GHTSLVYSVDAHSSGLIVSASEDRHAKIW---KDG---VCVQSLEHPGCIWDA-KFL--- 277
Query: 386 GEETEDEYCTICTGSLDGVLKMWRV 410
ET D I T DGV+++W V
Sbjct: 278 --ETGD----IVTACSDGVVRVWTV 296
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 122 (48.0 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 182 NLIVGK---DKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP 238
N++ GK + H + +IA + + L S S D+ + +W +R ++ ++++ AHS+P
Sbjct: 246 NVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDP 305
Query: 239 INALVVADDGVLY-SASDDATVRVW 262
++ + V DG L S + D VR+W
Sbjct: 306 VSGIDVVWDGTLIASCATDGLVRIW 330
Score = 55 (24.4 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 20/77 (25%), Positives = 29/77 (37%)
Query: 341 YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDE---YCTIC 397
YV++ + D R+W + GR L GH G +G+ Y
Sbjct: 360 YVLAWTLDDCVRLWDYVE-GR--CLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAV 416
Query: 398 TGSLDGVLKMWRVTRPK 414
+GS DG + W V K
Sbjct: 417 SGSEDGAILCWDVVTKK 433
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 105 IYTGSDSNVIRIW 117
I +GSD IR+W
Sbjct: 233 IASGSDDKTIRLW 245
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 334 CLASVANYVISGSADSTSRVW 354
C +++S D T RVW
Sbjct: 451 CSTGEGRFMVSCGLDGTVRVW 471
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 43 SPPRFSSPISLHTSPLSS 60
SPP SSPI + L++
Sbjct: 13 SPPPISSPIETSSDELAA 30
Score = 37 (18.1 bits), Expect = 8.7e-05, Sum P(4) = 8.7e-05
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 390 EDEYCTICTGSLDGVLKMWRVTRPK 414
E + C LDG +++W P+
Sbjct: 455 EGRFMVSC--GLDGTVRVWEEVGPE 477
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/169 (28%), Positives = 80/169 (47%)
Query: 95 ILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECG-RLKAKTSMVVAMEVSHDRVYAAYGD 151
+ C+A I TGS N IR W + + G L+ T ++A+ ++ A
Sbjct: 180 VSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMAL--CWQPLHLAPDS 237
Query: 152 GKIRVWRSTWDNGVK--HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTL 209
G + + DN V+ +VKL T+ T + G H PIT + + +
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFT-------LSG------HTAPITCVRWG-GQNWI 283
Query: 210 YSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDAT 258
YS+S DKTI++W +D KC+ ++ H+ +N L ++ + VL S + D T
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHT 332
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 83 RCISSVLKKDGQILCIAVG---NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139
RC +S+ DG I+ + + TGS R+W T +K T+ V +
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 140 VSHDRVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPI 197
+ D A G D IR W D PK G + G D + +H PI
Sbjct: 185 WAPDASIIATGSMDNTIRFW----D-----------PKKGSPI-----G-DALRRHTKPI 223
Query: 198 TSIA---INVSDDT----LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVL 250
++ ++++ D+ L S S D T+++W ++ + T+ H+ PI + +
Sbjct: 224 MALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWI 283
Query: 251 YSASDDATVRVW 262
YS+S D T+R+W
Sbjct: 284 YSSSYDKTIRIW 295
>UNIPROTKB|Q99973 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000722 "telomere maintenance via
recombination" evidence=IDA] [GO:0003720 "telomerase activity"
evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363 "nuclear matrix"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 CleanEx:HS_TEP1 EMBL:U86136
EMBL:BC126107 EMBL:BX640983 IPI:IPI00294519 IPI:IPI00413874
RefSeq:NP_009041.2 UniGene:Hs.508835 ProteinModelPortal:Q99973
SMR:Q99973 IntAct:Q99973 STRING:Q99973 PhosphoSite:Q99973
DMDM:215273899 PaxDb:Q99973 PRIDE:Q99973 Ensembl:ENST00000262715
GeneID:7011 KEGG:hsa:7011 UCSC:uc001vxe.3 CTD:7011
GeneCards:GC14M020833 H-InvDB:HIX0026646 HGNC:HGNC:11726
HPA:HPA029206 MIM:601686 neXtProt:NX_Q99973 PharmGKB:PA36443
HOGENOM:HOG000154545 HOVERGEN:HBG059633 InParanoid:Q99973 KO:K11127
OMA:SVPDAWK OrthoDB:EOG4001HG PhylomeDB:Q99973 ChiTaRS:TEP1
GenomeRNAi:7011 NextBio:27388 ArrayExpress:Q99973 Bgee:Q99973
Genevestigator:Q99973 GermOnline:ENSG00000129566 InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
Uniprot:Q99973
Length = 2627
Score = 118 (46.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373
W Q G GH AV +A+V +V+S S D T +VW D + L + H G
Sbjct: 2133 WDPESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDGTLKVW----DHQGVELTSIPAHSG 2188
Query: 374 PI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR---VTRPKSSCGH 419
PI CA A R + E + G LDG ++W V + + GH
Sbjct: 2189 PISHCAAAMEPRAAGQPGSELLVVTVG-LDGATRLWHPLLVCQTHTLLGH 2237
Score = 78 (32.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC---IETIQA-HSEPINALVVADDG 248
H GP++ + + +L + D+++ W +R K I + A H + + D
Sbjct: 2060 HEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDN 2119
Query: 249 VLYSASDDATVRVW 262
+L S S D +V +W
Sbjct: 2120 LLISCSSDGSVGLW 2133
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 189 KMMKHMG-P---ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
K+ K +G P I ++A NV + LD +++W R+ + AH + A +
Sbjct: 1833 KVTKDLGAPGASIRTLAFNVPGGVVAVGRLDSMVELWAWREGARLAAFPAHHGFVAAALF 1892
Query: 245 ADDGV-LYSASDDATVRVW 262
G L +A +D V+VW
Sbjct: 1893 LHAGCQLLTAGEDGKVQVW 1911
Score = 60 (26.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSASDDA 257
S + +SDDTL+ + D +++W ++ + +AH I ++ D +L +
Sbjct: 1722 SACLFLSDDTLFLTAFDGLLELWDLQHGCRVLQTKAHQYQITGCCLSPDCRLLATVCLGG 1781
Query: 258 TVRVW 262
+++W
Sbjct: 1782 CLKLW 1786
Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIWK----QPEFTECGRLKAKTSMVVAMEVSHDRVYAAY-G 150
L + G + G D V ++W +P G L ++ VA+ DRV Y
Sbjct: 1891 LFLHAGCQLLTAGEDGKV-QVWSGSLGRPR-GHLGSLSLSPALSVALSPDGDRVAVGYRA 1948
Query: 151 DGKIRVWR-STWDNGVK 166
DG IR+++ S+ G +
Sbjct: 1949 DG-IRIYKISSGSQGAQ 1964
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA-DDGVLY 251
H GP+ S++ + + L SA D+ +K+W + + ++ H++ I +L + D G++
Sbjct: 21 HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 80
Query: 252 SASDDATVRVW 262
SAS D +VRVW
Sbjct: 81 SASMDNSVRVW 91
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 101 (40.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 45/199 (22%), Positives = 86/199 (43%)
Query: 82 YRCISSVLKKDGQ-ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
Y+ + L + GQ + C+ I + V+R +Q + + V +
Sbjct: 25 YKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITAFDLSPDNEVLVTA 84
Query: 141 SHDRVYA--AYGDGKI-RVWRSTWDNGVKHVKL---ATIPKTGG---AVR--NLI--VGK 187
S + A A+ +G + R+W++ V + +T+ TGG AVR +++ G
Sbjct: 85 SRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGT 144
Query: 188 DKMMKHMGPITSIAINVSDDT---LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
G + +A + D T L+S++ D I+VW ++D C+ + AH + +L
Sbjct: 145 HHFRGSPGVVHLVAFH-PDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAF 203
Query: 245 ADDG-VLYSASDDATVRVW 262
+ DG + S+ D +W
Sbjct: 204 SADGHTMLSSGRDKICIIW 222
Score = 90 (36.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA-SVANYVIS-GSADSTSRVWAREQDGRHTMLAVLV 369
K W Q Q G GH + C+ S + V++ SAD T ++WA QD + L
Sbjct: 504 KLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL-QD--FSCLKTFE 560
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH + +AF+ R G + + +GS DG++K+W +
Sbjct: 561 GHDASV-LKVAFVSR-GTQL------LSSGS-DGLVKLWTI 592
Score = 87 (35.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC------IETIQAH----SEPINAL 242
H +TS+A + T+ S+ DK +W ++ + E+++A EP++ L
Sbjct: 194 HYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQL 253
Query: 243 VVADDGVLY-SASDDATVRVW 262
V G+ + +A D T+RVW
Sbjct: 254 GVKSPGLYFLTAGDQGTLRVW 274
Score = 76 (31.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY-SASDDATVRVWR 263
D + AS +KV+ ++ S C + + H++ + AL V G L+ S + D +VR+WR
Sbjct: 347 DSHVVVASNSPCLKVFELQTSAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWR 404
Score = 75 (31.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 344 SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG 403
+GS D T+++WA Q +L V GHR + C + F D+ + T S DG
Sbjct: 496 TGSQDRTAKLWALPQC---QLLGVFSGHRRGLWC-VQF------SPMDQ--VLATASADG 543
Query: 404 VLKMWRVTRPKSSCGHLNKTNGHE 427
+K+W + SC L GH+
Sbjct: 544 TIKLWALQ--DFSC--LKTFEGHD 563
Score = 70 (29.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 327 GHTHAV--MCLASVA-NYVISGSADSTSRVWAREQD--GRHTML---AVLVGHRGPIRCA 378
GHTH+V +C + + +++++GS D T ++W + ++T +L+ + RC
Sbjct: 419 GHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCH 478
Query: 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGH 426
+ D+ + TGS D K+W + P+ C L +GH
Sbjct: 479 DKDINSVAIAPNDKL--LATGSQDRTAKLWAL--PQ--CQLLGVFSGH 520
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 183 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 238 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 122 (48.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 146 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 200 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 253
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 254 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 288
Score = 119 (46.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 104 SASDDKTLKIW 114
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 186 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 234
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNE 258
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 7 PNPSFAIRETTPTGTAPSTFLR-SISTKEPSFSTFPYSP 44
P PS + ++ PT P+ L+ +++ + S+ +SP
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSP 55
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 183 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 238 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 122 (48.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 146 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 200 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 253
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 254 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 288
Score = 119 (46.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 104 SASDDKTLKIW 114
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 186 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 234
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNE 258
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 7 PNPSFAIRETTPTGTAPSTFLR-SISTKEPSFSTFPYSP 44
P PS + ++ PT P+ L+ +++ + S+ +SP
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSP 55
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 183 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 238 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 122 (48.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 146 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 200 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 253
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 254 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 288
Score = 119 (46.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 104 SASDDKTLKIW 114
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 186 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 234
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNE 258
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 7 PNPSFAIRETTPTGTAPSTFLR-SISTKEPSFSTFPYSP 44
P PS + ++ PT P+ L+ +++ + S+ +SP
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSP 55
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 183 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 238 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Score = 122 (48.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 146 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 200 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 253
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 254 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 288
Score = 119 (46.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 104 SASDDKTLKIW 114
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 186 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 234
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNE 258
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 7 PNPSFAIRETTPTGTAPSTFLR-SISTKEPSFSTFPYSP 44
P PS + ++ PT P+ L+ +++ + S+ +SP
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSP 55
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 132 (51.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 176 TGGAVRNLIV---GKDKMMK----HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC 228
TGGA +N+IV ++++ H +TS+ + S D ++SAS D TI++W + ++ C
Sbjct: 55 TGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 114
Query: 229 IETIQAHSEPINALVVADDG-VLYSASDD 256
++ ++AH + L + G L S+SDD
Sbjct: 115 VQVVRAHEGSVTGLSLHATGDYLLSSSDD 143
>RGD|3869 [details] [associations]
symbol:Tep1 "telomerase associated protein 1" species:10116 "Rattus
norvegicus" [GO:0000722 "telomere maintenance via recombination"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005697 "telomerase holoenzyme complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;IDA] [GO:0007004
"telomere maintenance via telomerase" evidence=ISO] [GO:0003720
"telomerase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400
Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988
SMART:SM00320 RGD:3869 GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003723 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030529
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 GO:GO:0003720 CTD:7011
HOGENOM:HOG000154545 HOVERGEN:HBG059633 KO:K11127 OrthoDB:EOG4001HG
InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386
PROSITE:PS51226 EMBL:U89282 IPI:IPI00194683 PIR:T32735
RefSeq:NP_072113.1 UniGene:Rn.5890 ProteinModelPortal:O08653
STRING:O08653 PhosphoSite:O08653 PRIDE:O08653 GeneID:64523
KEGG:rno:64523 UCSC:RGD:3869 InParanoid:O08653 NextBio:613338
ArrayExpress:O08653 Genevestigator:O08653
GermOnline:ENSRNOG00000008964 Uniprot:O08653
Length = 2629
Score = 143 (55.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 60/242 (24%), Positives = 94/242 (38%)
Query: 196 PITSIAINVSDDTLYSASLDKTIKVW---------RIRDSKCIETIQAHSEPINALVVAD 246
P+ +A S + L SAS D T+++W + + C ++ H P+ +
Sbjct: 2025 PVLGLA--ASQEFLASASEDFTVRLWPRQLLTQPHAVEELPCAAELRGHEGPVCCCSFSP 2082
Query: 247 DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXX 305
DG +L +A D + W Q LI T ++ +
Sbjct: 2083 DGRILATAGRDRNLLCWD---VKVAQAPLLIHTFSSCHRDWITGCTWTKDNILISCSSDG 2139
Query: 306 XIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTML 365
+ W+ QL G GH AV + +V +++S S D T +VW R+ G L
Sbjct: 2140 SVGLWNPE-AGQQL---GQFPGHQSAVSAVVAVEEHIVSVSRDGTLKVWDRQ--G--VEL 2191
Query: 366 AVLVGHRGPI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTN 424
+ H GPI +CA A R + E + G LDG K+W P C ++
Sbjct: 2192 TSIPAHSGPISQCAAALEPRPAGQPGSELMVVTVG-LDGATKLWH---PLLVC-QIHTLQ 2246
Query: 425 GH 426
GH
Sbjct: 2247 GH 2248
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWK----QPEFTEC-GRLKAKTSMVVAMEVSHDRVYAAY 149
+L + G F+ G D ++W +P C G L ++ VA+ D+V Y
Sbjct: 1901 VLFLHAGGRFLTAGEDGKA-QLWSGFLGRPR--GCLGSLYLSPALSVALNPDGDQVAVGY 1957
Query: 150 -GDGKIRVWR 158
GDG I+++R
Sbjct: 1958 RGDG-IKIYR 1966
Score = 54 (24.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/73 (27%), Positives = 30/73 (41%)
Query: 85 ISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDR 144
+S L DG +AVG Y G + RI P+ +C L S +V + S
Sbjct: 1942 LSVALNPDGDQ--VAVG----YRGDGIKIYRISSGPQEAQCQELNVAVSALVWLSPSV-- 1993
Query: 145 VYAAYGDGKIRVW 157
+ + DG + W
Sbjct: 1994 LVSGAEDGSLHGW 2006
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 183 LIVGKDKMMKHMGPITS 199
+I G DK++ H G + S
Sbjct: 1277 IIDGADKLVDHNGQLIS 1293
>UNIPROTKB|E2RH42 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723
GO:GO:0030529 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:AAEX03009827 EMBL:AAEX03009828 EMBL:AAEX03009829
Ensembl:ENSCAFT00000008693 Uniprot:E2RH42
Length = 2602
Score = 122 (48.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/110 (31%), Positives = 51/110 (46%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373
W + Q G GH AV +A+V +V+S D T +VW D R L + H G
Sbjct: 2111 WDPERQQRLGLFLGHQSAVSAVAAVDAHVVSVGRDGTLKVW----DHRGVELTSIPAHSG 2166
Query: 374 PI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR---VTRPKSSCGH 419
PI +CA+A R + E + T LDG ++W V++ + GH
Sbjct: 2167 PISQCAVALEPRAAGQPGSELL-VATVGLDGATRLWHPLLVSQTHTLLGH 2215
Score = 78 (32.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 197 ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASD 255
+ ++A + LD T+++W R+ + T AH + A + DG L +A +
Sbjct: 1823 VRALAFRAPGRVVAVGRLDGTVELWSWREGVRLATFPAHRGVVVAALPLQDGCQLVTAGE 1882
Query: 256 DATVRVW 262
D V+VW
Sbjct: 1883 DGEVQVW 1889
Score = 70 (29.7 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 16/79 (20%), Positives = 33/79 (41%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK-----CIETIQAHSEPINALV 243
++ +H GP++ + L + D+ + W +R + C + H + +
Sbjct: 2034 ELREHQGPVSCCGFSADGGRLATGGRDRNLFCWDVRKPQGPVVIC-SFLACHHDWVTGCA 2092
Query: 244 VADDGVLYSASDDATVRVW 262
D +L S S D +V +W
Sbjct: 2093 WTRDNLLVSCSSDGSVGLW 2111
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 91 KDGQILCIAVGNGFIYTGSDSNVIRIW-KQP 120
+ G + +AV + + S++ +R+W +QP
Sbjct: 1989 RQGPVWGLAVSGELLASTSEALPVRLWPRQP 2019
>ZFIN|ZDB-GENE-050522-296 [details] [associations]
symbol:wdr16 "WD repeat domain 16" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050522-296
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:146845 HOVERGEN:HBG055224 EMBL:BC095635
IPI:IPI00493492 RefSeq:NP_001018475.1 UniGene:Dr.80804
ProteinModelPortal:Q502N0 STRING:Q502N0 GeneID:553666
KEGG:dre:553666 InParanoid:Q502N0 NextBio:20880399
ArrayExpress:Q502N0 Uniprot:Q502N0
Length = 617
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 54/220 (24%), Positives = 95/220 (43%)
Query: 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTI 218
S W++G +++ T P++G LI+ H +T+IA + S + +
Sbjct: 388 SAWNDG--KIRVFT-PESGKL--KLIIHN----AHSMAVTTIAATNDCKRIVSGGGEGQV 438
Query: 219 KVWRI-RDS-KCIETIQAHSEPINALVV-ADDGVLYSASDDATVRVWRRYFYSENQLHTL 275
+VW I +DS + IET++ H +N + + ++D +AS D +W + NQ+
Sbjct: 439 RVWEIFQDSYRLIETMKEHKATVNCIKIKSNDKECVTASSDGACIIWDLVRFVRNQM--- 495
Query: 276 ILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCL 335
+L+ T +S V I YW SA + G+L G + M +
Sbjct: 496 VLSNTL-FSVV---CYHPEEYQIITSGTDRKIGYWEVYDGSAIRELEGSLSGSING-MHI 550
Query: 336 ASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI 375
+ Y ++G D ++W DG T + + GH G I
Sbjct: 551 SEDGKYFVTGGDDKLLKLWLYS-DGEVTHVGI--GHSGSI 587
Score = 63 (27.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVW 157
G ++ N IR+W E R+ A+ D +++A+ DGKIRV+
Sbjct: 340 GTSELFATCSHNDIRVWHSESSKELLRITVPNITCHALGFMRDGRSIFSAWNDGKIRVF 398
Score = 57 (25.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 108 GSDSNVIRIWK-QPEFTECGRLKAKTSM--VVAMEVSH--DRVYAAYGDGKIRVW 157
G D I +W + + CG + S +A+E ++ D ++ + G+G +RVW
Sbjct: 128 GQDDASIVVWNIESKEAICGSPASAQSAGHCLALEYTNLSDEIFVSAGNGTLRVW 182
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 82 YRCISSVLKKDGQILCIAV-GNGF-IYTGSDSNVIRIWK----QPEFTECGRLKAKTSMV 135
++ I SV + +G + + + G+G Y G+++ + +PE T A
Sbjct: 278 FKTIKSV-QLEGGVTSVTLRGDGHQFYVGTEAAQMYSLSYTDFKPELTATNHNSAVKD-- 334
Query: 136 VAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIP 174
VA ++A IRVW S K + T+P
Sbjct: 335 VAFPFGTSELFATCSHNDIRVWHS---ESSKELLRITVP 370
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 168 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 221 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 99 (39.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 125 FSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 241
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 242 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 169 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 222 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 99 (39.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 126 FSASTDKTVAVW 137
Score = 61 (26.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 242
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 243 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF 285
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 169 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 222 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 99 (39.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 126 FSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 242
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 243 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 169 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 222 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 99 (39.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 126 FSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 242
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 243 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 169 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 222 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 98 (39.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 126 FSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 242
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 243 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 118 (46.6 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H +T ++ + + SAS D+TI++ ++ KC++ + HS +N + DG
Sbjct: 306 HSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAI 365
Query: 252 SASDDATVRVW 262
SAS D TV+VW
Sbjct: 366 SASSDGTVKVW 376
Score = 62 (26.9 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG- 150
DGQ L +GFI + + +I K ++ V+ M S D A G
Sbjct: 225 DGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGA 283
Query: 151 -DGKIRVWR 158
DGKI+VW+
Sbjct: 284 QDGKIKVWK 292
Score = 41 (19.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 396 ICTGSLDGVLKMWR 409
I T S DG+LK+W+
Sbjct: 499 IGTYSEDGLLKLWK 512
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 121 (47.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 106 YTGSDSNVIRIWKQPEFTEC------GRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRS 159
YT DS + + + F+EC G K TS VA + ++ ++ DG +RVW
Sbjct: 138 YTNFDSKNLDLASR-YFSECSTKDFIGNKKKSTS--VAWNANGTKIASSGSDGIVRVWN- 193
Query: 160 TWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASLDKT 217
+D G + + + + N I ++ H G I I+ + ++D L SA DK
Sbjct: 194 -FDPLGNSNNNNNSNNTSSNSKNNNIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKV 252
Query: 218 IKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDD 256
IK+W ++ KCI T+ +SE I+ D + + + D
Sbjct: 253 IKIWDVKIGKCIGTVSTNSENIDVRWSPDGQFIVACTRD 291
Score = 61 (26.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVW 354
L GHT ++ C+ Y+ +GSADS +W
Sbjct: 355 LYGHTASIYCMEFDPTGKYLAAGSADSIVSLW 386
Score = 38 (18.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 365 LAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
L L GH I C + F + +Y + GS D ++ +W +
Sbjct: 352 LKTLYGHTASIYC-MEF------DPTGKY--LAAGSADSIVSLWDI 388
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 110 (43.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYNLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ + S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 68 (29.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 331 AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
+++C + SVA + +G D VW + R + +L GH + C LG
Sbjct: 268 SIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSER---VGILSGHDNRVSC----LG- 319
Query: 385 FGEETEDEYCTICTGSLDGVLKMW 408
T D + TGS D LK+W
Sbjct: 320 ---VTADGMA-VATGSWDSFLKIW 339
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 127 (49.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/173 (25%), Positives = 74/173 (42%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKT-SMVVAMEVSHDRVYAAYG 150
G I C + F+ +GS +++W PE T G + K S A E + V +
Sbjct: 436 GSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 151 DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY 210
D K+ S D K L+ + + G R H + S+ + D L
Sbjct: 496 D-KLLASGSQ-DRTAKLWALSDL-RLLGVCRG----------HRRGVWSVQFSPVDQILG 542
Query: 211 SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
SAS D ++++W I+D C++T + H + ++ G L S+ D V++W
Sbjct: 543 SASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLW 595
Score = 121 (47.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 42/155 (27%), Positives = 72/155 (46%)
Query: 122 FTECGRLKAKTSMVVAMEVSHDRVYA-AYGDGKIRVWRSTWDNGVKH-----------VK 169
F C K K+ V M+VS RV+ A G G S + +K VK
Sbjct: 401 FATCA--KDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVK 458
Query: 170 LATIPKTGGAVRNLIV-GKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC 228
+ +P+T GA +++ + H + S+ ++ +D L S S D+T K+W + D +
Sbjct: 459 VWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRL 518
Query: 229 IETIQAHSEPINALVVAD-DGVLYSASDDATVRVW 262
+ + H + ++ + D +L SAS D +VR+W
Sbjct: 519 LGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIW 553
Score = 111 (44.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRV 261
++S L+S+S D I++W +R S+C+ +++H P+ AL + DG L S+ D V
Sbjct: 159 DISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSV 218
Query: 262 W 262
W
Sbjct: 219 W 219
Score = 98 (39.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA-DDGVL 250
H + I I VS T L S+ D +K+W I+ ++C+ T+ AH + + AL D ++
Sbjct: 567 HDASVLKI-IFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELM 625
Query: 251 YSASDDATVRVW 262
+ S D+T+ VW
Sbjct: 626 VTGSADSTITVW 637
Score = 88 (36.0 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV--- 249
H P+ S++ + + L + D TIK+W + C ++ S ++ + D
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPV 286
L+S+S D +R+W + + + L + YSPV
Sbjct: 165 LFSSSSDCAIRIW------DLRSSRCVCVLESHYSPV 195
Score = 84 (34.6 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H P+T++A + TL S+ DK VW +++ K TI + E + +V+ YS
Sbjct: 191 HYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVY-EAVEGVVLLSGSADYS 249
Score = 78 (32.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA-SVANYVI-SGSADSTSRVWAREQDGRHTMLAVLV 369
K W + L+ G +GH V + S + ++ S SAD + R+W+ QD + L
Sbjct: 509 KLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSI-QD--FSCLKTFE 565
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH + I F+ R G + + +GS DG++K+W +
Sbjct: 566 GHDASV-LKIIFVSR-GTQL------VSSGS-DGLVKLWTI 597
Score = 68 (29.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 90 KKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH-DRVY-A 147
+KD +C++ + + +GS ++W + G + V +++ S D++ +
Sbjct: 484 EKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGS 543
Query: 148 AYGDGKIRVW 157
A DG +R+W
Sbjct: 544 ASADGSVRIW 553
Score = 65 (27.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 29/120 (24%), Positives = 48/120 (40%)
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAV---MCLASVANYVISGSADSTSRVW-AREQDGRH 362
+ W S ++ GH++AV C +V+SGS D T +VW E G
Sbjct: 410 VRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAE 469
Query: 363 TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT--RPKSSC-GH 419
++ ++ R R + D+ + +GS D K+W ++ R C GH
Sbjct: 470 GVM--MMKARSTERAHEKDVNSVCVSPNDKL--LASGSQDRTAKLWALSDLRLLGVCRGH 525
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 342 VISGSADSTSRVW 354
+++GSADST VW
Sbjct: 625 MVTGSADSTITVW 637
Score = 45 (20.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 107 TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME----VSHDRVYAAYGDGKIRVW 157
TG I++W + LK + +V +E +S +++++ D IR+W
Sbjct: 123 TGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + + T Y V I W
Sbjct: 169 CTGSDDGTVKLW------DIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 222 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 99 (39.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 126 FSASTDKTVAVW 137
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 242
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 243 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + I T Y V I W
Sbjct: 168 CTGSDDGTVKLW------DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T RVW
Sbjct: 221 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 99 (39.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VL 250
H G + + + TL SA D+ I +W + D T++ HS + L DG +L
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 251 YSASDDATVRVW 262
+SAS D TV VW
Sbjct: 125 FSASTDKTVAVW 136
Score = 60 (26.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 328 HTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRF 385
+T+ V+ + ++ +ISG D+ +VW Q+ + + GH A + G
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYTMRGH------ADSVTG-L 241
Query: 386 GEETEDEYCTICTGSLDGVLKMWRVT--RPKSSCGHLNKTNGHEY 428
+E Y + + ++D +++W V PK C + + N H +
Sbjct: 242 SLSSEGSY--LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 108 (43.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 70 (29.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSLKCERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 27/91 (29%), Positives = 40/91 (43%)
Query: 325 LQGHTH-AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377
L ++H +++C + SVA + +G D VW + R + VL GH + C
Sbjct: 261 LTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCER---VGVLSGHDNRVSC 317
Query: 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG T D + TGS D LK+W
Sbjct: 318 ----LG----VTADGMA-VATGSWDSFLKIW 339
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 108 (43.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 70 (29.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSMKCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 51 (23.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 325 LQGHTH-AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377
L ++H +++C + SVA + +G D VW + R + L GH + C
Sbjct: 261 LTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCER---VGTLSGHDNRVSC 317
Query: 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG T D + TGS D LK+W
Sbjct: 318 ----LG----VTADGMA-VATGSWDSFLKIW 339
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 97 (39.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 148 AYGDGKI-RVWRSTWDNGVKHVKL---ATIPKTGG---AVR--NLI--VGKDKMMKHMGP 196
A+ +G + R+W++ V + +T+ TGG AVR +++ G G
Sbjct: 2 AWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGV 61
Query: 197 ITSIAINVSDDT---LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYS 252
+ +A + D T L+S++ D I+VW ++D C+ + AH + +L + DG + S
Sbjct: 62 VHLVAFH-PDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLS 120
Query: 253 ASDDATVRVW 262
+ D +W
Sbjct: 121 SGRDKICIIW 130
Score = 90 (36.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA-SVANYVIS-GSADSTSRVWAREQDGRHTMLAVLV 369
K W Q Q G GH + C+ S + V++ SAD T ++WA QD + L
Sbjct: 393 KLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL-QD--FSCLKTFE 449
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH + +AF+ R G + + +GS DG++K+W +
Sbjct: 450 GHDASV-LKVAFVSR-GTQL------LSSGS-DGLVKLWTI 481
Score = 87 (35.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC------IETIQAH----SEPINAL 242
H +TS+A + T+ S+ DK +W ++ + E+++A EP++ L
Sbjct: 102 HYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQL 161
Query: 243 VVADDGVLY-SASDDATVRVW 262
V G+ + +A D T+RVW
Sbjct: 162 GVKSPGLYFLTAGDQGTLRVW 182
Score = 76 (31.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY-SASDDATVRVWR 263
D + AS +KV+ ++ S C + + H++ + AL V G L+ S + D +VR+WR
Sbjct: 255 DSHVVVASNSPCLKVFELQTSAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWR 312
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 344 SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG 403
+GS D T+++WA Q +L V GHR + C + F D+ + T S DG
Sbjct: 385 TGSQDRTAKLWALPQC---QLLGVFSGHRRGLWC-VQF------SPMDQ--VLATASADG 432
Query: 404 VLKMWRVTRPKSSCGHLNKTNGHE 427
+K+W + SC L GH+
Sbjct: 433 TIKLWALQ--DFSC--LKTFEGHD 452
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 179 AVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLDKTIKVWRIR--DSKC---IETI 232
A ++V + + H G +TS+A + + L SAS DKT+ W++ D K + +
Sbjct: 2 ASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF 61
Query: 233 QAHSEPI-NALVVADDGVLYSASDDATVRVW 262
+ HS + + + AD SAS D T+R+W
Sbjct: 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Score = 82 (33.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 327 GHTHAVMC--LASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
GH VM + A+ +ISGS D T +VW + G+ LA L+GH + + +
Sbjct: 105 GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQ--CLATLLGHNDWVS-QVRVVPN 159
Query: 385 FGEETEDEYCTICTGSLDGVLKMWRVTR 412
E+ +D+ TI + D ++K W + +
Sbjct: 160 --EKADDDSVTIISAGNDKMVKAWNLNQ 185
>MGI|MGI:109573 [details] [associations]
symbol:Tep1 "telomerase associated protein 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007004 "telomere maintenance via telomerase" evidence=IGI]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 MGI:MGI:109573 GO:GO:0005524
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723 GO:GO:0016363
GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0005697 GO:GO:0003720 GeneTree:ENSGT00690000102183 CTD:7011
HOGENOM:HOG000154545 HOVERGEN:HBG059633 KO:K11127 OMA:SVPDAWK
OrthoDB:EOG4001HG InterPro:IPR025139 InterPro:IPR008850
Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226 EMBL:U86137
IPI:IPI00125667 PIR:T30987 RefSeq:NP_033377.1 UniGene:Mm.318736
ProteinModelPortal:P97499 SMR:P97499 STRING:P97499
PhosphoSite:P97499 PaxDb:P97499 PRIDE:P97499
Ensembl:ENSMUST00000006444 GeneID:21745 KEGG:mmu:21745
UCSC:uc007tlt.1 InParanoid:P97499 NextBio:301032 Bgee:P97499
CleanEx:MM_TEP1 Genevestigator:P97499 GermOnline:ENSMUSG00000006281
Uniprot:P97499
Length = 2629
Score = 137 (53.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 58/249 (23%), Positives = 96/249 (38%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIR----------DSKCIETIQAHSEPI 239
+ ++ P+ +A S + + +AS D T+++W + + C ++ H P+
Sbjct: 2015 LSRYQKPVLGLA--ASRELMAAASEDFTVRLWPRQLLTQPHVHAVELPCCAELRGHEGPV 2072
Query: 240 NALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXX 298
+ DG +L +A D + W Q LI T ++ +
Sbjct: 2073 CCCSFSPDGGILATAGRDRNLLCWDMKIA---QAPLLIHTFSSCHRDWITGCAWTKDNIL 2129
Query: 299 XXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358
+ W+ QL G GH AV + +V +++S S D T +VW
Sbjct: 2130 VSCSSDGSVGLWNPE-AGQQL---GQFSGHQSAVSAVVAVEEHIVSVSRDGTLKVW---- 2181
Query: 359 DGRHTMLAVLVGHRGPI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417
D + L + H GPI +CA A R G + E + G LDG K+W P C
Sbjct: 2182 DHQGVELTSIPAHSGPISQCAAALEPRPGGQPGSELLVVTVG-LDGATKLWH---PLLVC 2237
Query: 418 GHLNKTNGH 426
+ GH
Sbjct: 2238 -QIRTLQGH 2245
Score = 60 (26.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWK----QPEFTEC-GRLKAKTSMVVAMEVSHDRVYAAY 149
+L + G+ F+ G D ++W +P C G L ++ VA+ D+V Y
Sbjct: 1897 VLFLHAGDRFLTAGEDGKA-QLWSGFLGRPR--GCLGSLPLSPALSVALNPDGDQVAVGY 1953
Query: 150 GDGKIRVWR-STWDNGVKHVKL 170
+ I +++ S+ G +H +L
Sbjct: 1954 REDGINIYKISSGSQGPQHQEL 1975
Score = 53 (23.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/78 (24%), Positives = 29/78 (37%)
Query: 85 ISSVLKKDGQILCIAVGN--G-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
++ L G +C N G + G + +W E A+ V A+
Sbjct: 1841 VTKELGAPGPSVCSLAFNKPGKIVAVGRIDGTVELWAWQEGARLAAFPAQCGCVSAVLFL 1900
Query: 142 H--DRVYAAYGDGKIRVW 157
H DR A DGK ++W
Sbjct: 1901 HAGDRFLTAGEDGKAQLW 1918
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 54/222 (24%), Positives = 96/222 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H G +TS++ + + ++S D TIKVW +R S I H+ P+N +V+ + G L
Sbjct: 74 HRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVR-SPSIPRNYKHNAPVNEVVIHPNQGELI 132
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S D +R+W ENQ T LT S ++ + W
Sbjct: 133 SCDRDGNIRIWD---LGENQC-THQLTPEDDTS-LQSLSMASDGSMLAAANTKGNCYVWE 187
Query: 312 --KGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQDGRHTMLAV 367
++ L+ + H+ + + L+S ++ + SAD T+RVW+ + D + +
Sbjct: 188 MPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFK--LETT 245
Query: 368 LVGHRGPI-RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
L GH+ + CA + + Y + T S D +++W
Sbjct: 246 LDGHQRWVWDCAFS--------ADSAY--LVTASSDHYVRLW 277
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 115 (45.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 20/70 (28%), Positives = 42/70 (60%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H +T++ ++ T+ +A+LD T++VW + +C ++ H+ + L + +D V+ +
Sbjct: 324 HTDVVTALDLDYPFGTMITAALDDTVRVWDLNIGRCTGFLEGHNASVRCLQI-EDNVVAT 382
Query: 253 ASDDATVRVW 262
S DATV++W
Sbjct: 383 GSMDATVKLW 392
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 331 AVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETE 390
AV C + + G+AD R+W H L VGH GP+ C + F +
Sbjct: 505 AVQCFDAA---LACGTADGMVRLWDLRSGQVHRSL---VGHTGPVSC-LQF--------D 549
Query: 391 DEYCTICTGSLDGVLKMW 408
D + + TGSLD +++W
Sbjct: 550 DVH--LVTGSLDRSIRIW 565
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
W Q +L GHT V CL ++++GS D + R+W
Sbjct: 525 WDLRSGQVHRSLVGHTGPVSCLQFDDVHLVTGSLDRSIRIW 565
Score = 38 (18.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 11 FAIRETTPTGTAPSTFLRSISTKEPSFSTFP 41
FA+ +TTPT S L + + + S+ P
Sbjct: 80 FALAQTTPTDLVRSK-LSTSEIQSRAISSLP 109
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H + N + + S S D+++++W ++ KC++T+ AHS+P++A+ D
Sbjct: 97 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 156
Query: 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXX 306
G ++ S+S D R+W S L TLI PV
Sbjct: 157 GSLIVSSSYDGLCRIWDTA--SGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNT 211
Query: 307 IHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ W Y G + + + SV +++SGS D+ +W
Sbjct: 212 LKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 260
Score = 122 (48.0 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-ADDGVLY 251
H I+ +A + + L SAS DKT+K+W + KC++T++ HS + ++
Sbjct: 60 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 119
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D +VR+W + + + TL A PV W
Sbjct: 120 SGSFDESVRIW------DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLV 369
S Q + V + N Y+++ + D+T ++W + G+ L
Sbjct: 174 TA--SGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GK--CLKTYT 227
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH+ C A G + I +GS D ++ +W +
Sbjct: 228 GHKNEKYCIFANFSVTGGKW------IVSGSEDNLVYIWNL 262
Score = 119 (46.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLY 251
H ++S+ + + + L S+S DK IK+W D K +TI H I+ + +D +L
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 77
Query: 252 SASDDATVRVW 262
SASDD T+++W
Sbjct: 78 SASDDKTLKIW 88
Score = 53 (23.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
++S S D R+W G+ L L+ P ++F+ +F +Y I +L
Sbjct: 160 IVSSSYDGLCRIWDTAS-GQ--CLKTLIDDDNP---PVSFV-KFSPN--GKY--ILAATL 208
Query: 402 DGVLKMWRVTRPK---SSCGHLNK 422
D LK+W ++ K + GH N+
Sbjct: 209 DNTLKLWDYSKGKCLKTYTGHKNE 232
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 126 (49.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 43/165 (26%), Positives = 76/165 (46%)
Query: 105 IYTGSDSNVIRIWKQP------EFTECGRLKAKTSMVVAMEVSHDR-VYAAYGDGKIRVW 157
+ TGS + I +WK P ++ E + ++A+ H + V + G G I +
Sbjct: 520 LITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAVLSGHTQSVRSISGYGNIII- 578
Query: 158 RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKT 217
++D+ V+ L G +++ G H+ + S AI+ T +S S+D
Sbjct: 579 SGSYDSTVRVWDLLD----DGHCTHVLQG------HLDRVYSTAIDFHSKTCFSGSMDSN 628
Query: 218 IKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
I VW + + + H+ + L + DD VL SA+ DAT+R+W
Sbjct: 629 INVWNFETGELKKVLVGHASLVGLLDLVDD-VLVSAAADATLRIW 672
Score = 104 (41.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 31/85 (36%), Positives = 40/85 (47%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT +V ++ N +ISGS DST RVW DG T VL GH L R
Sbjct: 560 LSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCTH--VLQGH----------LDR 607
Query: 385 FGEETEDEYCTIC-TGSLDGVLKMW 408
D + C +GS+D + +W
Sbjct: 608 VYSTAIDFHSKTCFSGSMDSNINVW 632
Score = 83 (34.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVR 260
A+ + +TL + S D+T++VW ++ +C + H+ I L + V+ D +
Sbjct: 454 ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIGKNQDGEDI- 512
Query: 261 VWRRY 265
V+ Y
Sbjct: 513 VFPEY 517
Score = 47 (21.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358
W + + L+GH A+ C V+SGS + ++W E+
Sbjct: 672 WDAKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNVEK 715
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 126 (49.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 43/165 (26%), Positives = 76/165 (46%)
Query: 105 IYTGSDSNVIRIWKQP------EFTECGRLKAKTSMVVAMEVSHDR-VYAAYGDGKIRVW 157
+ TGS + I +WK P ++ E + ++A+ H + V + G G I +
Sbjct: 520 LITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAVLSGHTQSVRSISGYGNIII- 578
Query: 158 RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKT 217
++D+ V+ L G +++ G H+ + S AI+ T +S S+D
Sbjct: 579 SGSYDSTVRVWDLLD----DGHCTHVLQG------HLDRVYSTAIDFHSKTCFSGSMDSN 628
Query: 218 IKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVW 262
I VW + + + H+ + L + DD VL SA+ DAT+R+W
Sbjct: 629 INVWNFETGELKKVLVGHASLVGLLDLVDD-VLVSAAADATLRIW 672
Score = 104 (41.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 31/85 (36%), Positives = 40/85 (47%)
Query: 325 LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
L GHT +V ++ N +ISGS DST RVW DG T VL GH L R
Sbjct: 560 LSGHTQSVRSISGYGNIIISGSYDSTVRVWDLLDDGHCTH--VLQGH----------LDR 607
Query: 385 FGEETEDEYCTIC-TGSLDGVLKMW 408
D + C +GS+D + +W
Sbjct: 608 VYSTAIDFHSKTCFSGSMDSNINVW 632
Score = 83 (34.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVR 260
A+ + +TL + S D+T++VW ++ +C + H+ I L + V+ D +
Sbjct: 454 ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIGKNQDGEDI- 512
Query: 261 VWRRY 265
V+ Y
Sbjct: 513 VFPEY 517
Score = 47 (21.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358
W + + L+GH A+ C V+SGS + ++W E+
Sbjct: 672 WDAKTGELRSKLKGHGAAITCFEHDGLRVVSGS-EKMLKLWNVEK 715
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 151 (58.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 50/164 (30%), Positives = 77/164 (46%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR--DSKCIETIQAHSEPINALVVADDGVL 250
H I SIA N + ++++S D TIKV IR ++KCIET+ H+ +N VVA++ L
Sbjct: 911 HRKSIESIACN--SNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNC-VVANEKYL 967
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+S S D T++VW + E + + T KY +K I+ W
Sbjct: 968 FSCSYDKTIKVWDLSTFKEIKSFEGVHT---KY--IKTLALSGRYLFSGGNDQI--IYVW 1020
Query: 311 HKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
S +QGH V+ L A+Y+ S S D+ ++W
Sbjct: 1021 DTETLSMLFN----MQGHEDWVLSLHCTASYLFSTSKDNVIKIW 1060
Score = 113 (44.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 188 DKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPINALVVAD 246
D + H ++S V D LYS S D +IKVW + +C+ TI ++HS + L+V +
Sbjct: 1069 DTLKGHWNSVSSCV--VKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFN 1126
Query: 247 DGVLYSASDDATVRVW 262
+ ++ SA+ D +++VW
Sbjct: 1127 NQII-SAAFDGSIKVW 1141
Score = 76 (31.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 15/76 (19%), Positives = 35/76 (46%)
Query: 83 RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKA-KTSMVVAMEVS 141
+CI +++ G++ C+ ++++ S I++W F E + T + + +S
Sbjct: 945 KCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALS 1004
Query: 142 HDRVYAAYGDGKIRVW 157
+++ D I VW
Sbjct: 1005 GRYLFSGGNDQIIYVW 1020
Score = 61 (26.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/63 (14%), Positives = 30/63 (47%)
Query: 95 ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKI 154
I +A+ ++++G + +I +W + ++ V+++ + +++ D I
Sbjct: 998 IKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVI 1057
Query: 155 RVW 157
++W
Sbjct: 1058 KIW 1060
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWK-QPEFTEC-GRLKAKTSMVVAME 139
++C+ +V I IA + +I+T S N I++ + T+C L T V +
Sbjct: 902 WKCLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVV 961
Query: 140 VSHDRVYAAYGDGKIRVW 157
+ +++ D I+VW
Sbjct: 962 ANEKYLFSCSYDKTIKVW 979
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 147 AAYGDGKIRVW 157
A YGDG RV+
Sbjct: 886 AGYGDGTYRVF 896
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 119 (46.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 31/111 (27%), Positives = 46/111 (41%)
Query: 153 KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA 212
K W D G+ V I R + G H GP+ + N D L +
Sbjct: 591 KAAQWLKNLDTGMAGVDKDMIDPIKKFTRRTLYG------HQGPVYGCSFNPEDRFLITC 644
Query: 213 SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS-ASDDATVRVW 262
S D ++++W + C+ H P+ +V A G ++ ASDD T RVW
Sbjct: 645 SEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVW 695
Score = 69 (29.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 314 WFSAQLQYGGALQGHTHAV-MCLASV-ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371
W + LQGH + +CL +Y+ +GSAD T R+W + + + GH
Sbjct: 695 WMQDNTKPARILQGHLAELGVCLFHPNRHYMATGSADCTVRIW---DIVKAVQVRIFRGH 751
Query: 372 RGPIRCAI-AFLGRF 385
+ I I + GR+
Sbjct: 752 KSRITALIYSICGRY 766
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 108 (43.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYNLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 69 (29.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSLKCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 50 (22.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 331 AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
+++C + SVA + +G D VW + R + +L GH + C LG
Sbjct: 268 SIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCER---VGILSGHDNRVSC----LG- 319
Query: 385 FGEETEDEYCTICTGSLDGVLKMW 408
T D + TGS D LK+W
Sbjct: 320 ---VTADGMA-VATGSWDSFLKIW 339
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 121 (47.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 196 PITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSAS 254
P+T++AI+ + + +YS +D IKVW +R + + H + I L V+ D L S +
Sbjct: 189 PVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYA 248
Query: 255 DDATVRVW--RRYFYSENQLHT 274
D+T R W R + +E + T
Sbjct: 249 MDSTARTWDIRPFAPTERHIRT 270
Score = 110 (43.8 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G I + + D ++SAS D + W + + I H E IN+L ++ G +L
Sbjct: 102 HRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEIL 161
Query: 251 YSASDDATVRVW 262
+S SDD T+ +W
Sbjct: 162 FSGSDDGTIGIW 173
Score = 55 (24.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
V G+AD T +W+ E G+ T L GH+ + C F TE I +GS
Sbjct: 294 VAMGAADGTVVIWSNET-GKLTYK--LPGHKAAVNCV-----EFSPGTEP---LILSGSS 342
Query: 402 DGVL 405
D L
Sbjct: 343 DKTL 346
Score = 44 (20.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 333 MCLASVANYVISGSADSTSRVWAREQDGRHTMLAV-LVGHRGPI 375
+ ++ N + SG D+ +VW D R + + GHR I
Sbjct: 193 VAISEAGNEIYSGGIDNDIKVW----DVRKKAVVYNMAGHRDTI 232
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 108 (43.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W IR+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 61 (26.5 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 328 HTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
H + + + SVA +++G D VW + R VL GH + C L
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADR---AGVLAGHDNRVSC----L 318
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
G D+ + TGS D LK+W
Sbjct: 319 G-----VTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 192 KHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE-PINALVVADDG-V 249
KH P+ + I+ + L S D I+VW + ++ C + + PIN+L VA DG +
Sbjct: 139 KHQCPVNEVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSM 198
Query: 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHY 309
L + ++ VW+ +NQ +LT K+ +
Sbjct: 199 LVAGNNKGNCYVWKM----QNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADH 254
Query: 310 WHKGWFSAQ-LQYGGALQGHTHAVM-CLASVAN-YVISGSADSTSRVWAREQDGRHTMLA 366
+ W + Q LQGH V C S + Y+++ +D R+W + T+
Sbjct: 255 TARIWSTEQNFNLETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLW--DLSNSETVRQ 312
Query: 367 VLVGHRGPIRCAI 379
H+G + A+
Sbjct: 313 YNGHHKGAVCVAL 325
Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 108 GSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHD-RVYAAYGDGKIRVW--RSTWDN 163
G D + IR W C R ++ S V +E++ D R AA G+ ++++ R T ++
Sbjct: 9 GYD-HTIRFWDALTGV-CSRTIQHPESQVNRLEITSDKRFLAAAGNLYVKLYDIRQTGNS 66
Query: 164 GV-KHVKLATIPKTGGAVRNLIVGKDKMM--KHMGPITSIAINVSDDTLYSASLDKTIKV 220
G + T T + +N M H +TS+ + + ++S D T+KV
Sbjct: 67 GNGANGTTNTSASTSSSNQNNSNNNPVMTFEGHKNNVTSLQFQADNKWMVTSSEDGTVKV 126
Query: 221 WRIRDSKCIETIQAHSEPINALVV-ADDGVLYSASDDATVRVW 262
W +R S ++ H P+N +V+ + G L S D +RVW
Sbjct: 127 WDVR-SPSVQRNYKHQCPVNEVVIHPNQGELISCDQDGNIRVW 168
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 116 (45.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 105 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 164
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 165 WLASAADDHTVKLW 178
Score = 49 (22.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 30 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 89
Query: 153 KIRVW 157
IRVW
Sbjct: 90 SIRVW 94
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 135 (52.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 47/192 (24%), Positives = 81/192 (42%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H + ++A + D L S+SLD TIK+W + T++ HS+ + ++ + DG +L
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D T+++W Q TLT + V I
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQ------TLTGRSDWVDSVAFSPDGKQLASGYYDSTI---- 1152
Query: 312 KGWFSAQLQYGGALQGHTHAVMCL--ASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369
K W SA + L+GH+ + + + + SGS D T+++W +L +
Sbjct: 1153 KLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW---DPATGELLQIFE 1209
Query: 370 GHRGPIRCAIAF 381
GH + ++AF
Sbjct: 1210 GHSKWVE-SVAF 1220
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 40/165 (24%), Positives = 68/165 (41%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H+GP+ S+ + L S S D T+K+W + ++T+ HS + +L + DG +L
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 252 SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWH 311
S S D T+ +W ++ L+ T + I W
Sbjct: 809 SGSYDNTIDLW------DSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
+ +LQ L H+ +V +A + + S S DST +VW
Sbjct: 863 LA--TGELQQ--TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Score = 55 (24.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 107 TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRST 160
+GS+ N +++W L+ + V ++ S D ++ ++ D I++W ST
Sbjct: 935 SGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST 990
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 126 (49.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G I + N L SA DKT++VW + CI ++H++ +N++ V G ++
Sbjct: 78 HKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMI 137
Query: 251 YSASDDATVRV 261
SASDD TV V
Sbjct: 138 CSASDDGTVMV 148
Score = 48 (22.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 339 ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC-AIAFLGRF 385
A+ VI G D+ +VW R+ + VL GHR I +++ G F
Sbjct: 175 ADNVICGGIDNQIKVWDML---RNDVRYVLSGHRDTITSLSVSHNGNF 219
Score = 38 (18.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 396 ICTGSLDGVLKMWRVTR 412
IC G +D +K+W + R
Sbjct: 179 IC-GGIDNQIKVWDMLR 194
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 135 (52.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G ++
Sbjct: 135 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 194
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + + + T Y V I W
Sbjct: 195 CTGSDDGTVKLW------DIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVW 247
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++GH +V + L+S +Y++S + D+T R+W
Sbjct: 248 DLR--QNKLTY--TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 116 (45.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
+M H I S+ + + + S S D IK+W IR C+ + HS+ + L + DG
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 250 -LYSASDDATVRVW 262
L SA+DD TV++W
Sbjct: 161 WLASAADDHTVKLW 174
Score = 49 (22.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 96 LCIAVGNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDG 152
L + +G + TG D + +W + L TS V V + + + A G
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG 85
Query: 153 KIRVW 157
IRVW
Sbjct: 86 SIRVW 90
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 107 (42.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 69 (29.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS ++W
Sbjct: 297 WDSMKCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 325 LQGHTH-AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377
L + H +++C + SVA + +G D VW + R + +L GH + C
Sbjct: 261 LTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCER---VGILSGHDNRVSC 317
Query: 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
LG T D + TGS D LK+W
Sbjct: 318 ----LG----VTADGMA-VATGSWDSFLKIW 339
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 105 (42.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LY 251
H + ++ + +D L +AS D TIK+W ++D C++T + H + + G L
Sbjct: 520 HRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLL 579
Query: 252 SASDDATVRVW 262
S+ D +++W
Sbjct: 580 SSGSDGLLKLW 590
Score = 104 (41.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 45/199 (22%), Positives = 90/199 (45%)
Query: 82 YRCISSVLKKDGQ-ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEV 140
Y+ + L + G+ + C+ I + ++IR +Q + + V +
Sbjct: 25 YKGGKAQLDQTGRHLFCVCGTKVNILDVASGDLIRSLEQEDQEDITAFDLSPDDEVLVTA 84
Query: 141 SHDRVYA--AYGDGKI-RVWRSTWDNGVKHVKL---ATIPKTGG---AVR--NLI--VGK 187
S + A A+ +G + R+W++ V + +T+ TGG AVR +++ G
Sbjct: 85 SRALLLAQWAWREGTVARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGT 144
Query: 188 DKMMKHMGPITSIAINVSDDT---LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV 244
G + +A + D T L+S+++D +I+VW ++D C+ + AH + +L
Sbjct: 145 HHFRGSPGVVHLVAFH-PDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSF 203
Query: 245 ADDG-VLYSASDDATVRVW 262
++DG + S+ D VW
Sbjct: 204 SEDGHTMLSSGRDKICIVW 222
Score = 82 (33.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCLA-SVANYVIS-GSADSTSRVWAREQDGRHTMLAVLV 369
K W Q Q G GH + + S + V++ SAD T ++WA QD + L
Sbjct: 504 KLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWAL-QD--FSCLKTFE 560
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410
GH + +AF+ R G + + +GS DG+LK+W +
Sbjct: 561 GHDASV-LKVAFVSR-GAQL------LSSGS-DGLLKLWTI 592
Score = 71 (30.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 327 GHTHAV--MCLASVA-NYVISGSADSTSRVWAREQ--DGRHTML---AVLVGHRGPIRCA 378
GHTH+V +C + + +++++GS D T ++W + ++T + + + RC
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCH 478
Query: 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGH 426
+ D+ + TGS D K+W + P+ C L +GH
Sbjct: 479 DKDINSLAVSPNDKL--LATGSQDRTAKLWAL--PQ--CQLLGVFSGH 520
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/111 (27%), Positives = 47/111 (42%)
Query: 319 LQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIR 376
LQ + H + LA N + +GS D T+++WA Q +L V GHR +
Sbjct: 469 LQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQC---QLLGVFSGHRRGL- 524
Query: 377 CAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
+ F T+ + T S DG +K+W + SC L GH+
Sbjct: 525 WNVQF-----SPTDQ---VLATASADGTIKLWALQ--DFSC--LKTFEGHD 563
Score = 59 (25.8 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPE 121
G I C + F+ TGS +++W PE
Sbjct: 425 GTICCSRLKESFLVTGSQDCTVKLWPLPE 453
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 328 HTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
H + + + SVA +++G D VW + R VL GH + C L
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----L 318
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
G D+ + TGS D LK+W
Sbjct: 319 G-----VTDDGMAVATGSWDSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 59 (25.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 285 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 332
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 333 DSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 59 (25.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 285 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 332
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 333 DSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 59 (25.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 285 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 332
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 333 DSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 59 (25.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 285 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 332
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 333 DSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 183 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 242 ATGSDDATCRLF 253
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 59 (25.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 285 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 332
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 333 DSFLKIW 339
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 128 (50.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 39/172 (22%), Positives = 70/172 (40%)
Query: 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDG 152
G + C + F+ T S I++W PE KAK +++ E H ++ D
Sbjct: 435 GAVSCSRLKESFVVTSSQDCTIKVWNIPESLTS---KAKAALISGPETLHAQMTERGHDK 491
Query: 153 KIR-VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211
I V S D + + K ++G H I + + D L +
Sbjct: 492 DINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGV--FTGHKRGIWCVQFSPVDQILAT 549
Query: 212 ASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV-LYSASDDATVRVW 262
+S D T+K+W ++D C++T + H + ++ G L S D +++W
Sbjct: 550 SSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLW 601
Score = 100 (40.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRV 261
++S L+S+S+D I++W + SKC+ + H + +L DG L S+ D V
Sbjct: 163 DISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMV 222
Query: 262 W 262
W
Sbjct: 223 W 223
Score = 96 (38.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 197 ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA-HSEPINALVVADDGVLYSASD 255
ITS ++ D+ L + S +K W R+++C+ T +A H P+ +V L +
Sbjct: 70 ITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGG 129
Query: 256 -DATVRVW 262
D+T+++W
Sbjct: 130 CDSTIKIW 137
Score = 86 (35.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 31/118 (26%), Positives = 50/118 (42%)
Query: 312 KGWFSAQLQYGGALQGHTHAVMCL--ASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369
K W G GH + C+ + V + + SAD T ++W QD + L
Sbjct: 515 KLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGL-QD--FSCLKTFE 571
Query: 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
GH + I F+ R G + + +G DG+LK+W + + C + +GHE
Sbjct: 572 GHDASV-LKIIFVSR-GTQ-------LLSGGSDGLLKLWTIKT--NEC--VKTLDGHE 616
Score = 81 (33.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
H +TS+A +TL S+ DK VW ++ + I TI + A+++ + G
Sbjct: 195 HFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQG 250
Score = 81 (33.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV--- 249
H+ P+ ++ + + L + D TIK+W + C ++ S ++ + D
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 250 LYSASDDATVRVW 262
L+S+S D +R+W
Sbjct: 169 LFSSSMDYKIRIW 181
Score = 79 (32.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY-SASDDATVRVWR 263
D + A+ +KV+ + S C + + H+E I AL V G+++ S + D ++RVWR
Sbjct: 357 DSHIVVATNSPQLKVFELSTSHC-QILYGHTETILALDVFRKGLMFVSCAKDKSIRVWR 414
Score = 77 (32.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 325 LQGHTHAVMCLASVANYV--ISGSADSTSRVWAREQDGRHTMLAVLVGHR---GPIRCAI 379
L GHT ++ L + +S + D + RVW +DGR +A +GH G + C+
Sbjct: 382 LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCS- 440
Query: 380 AFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHEYFELQ 432
R E + T S D +K+W + +S +G E Q
Sbjct: 441 ----RLKESF------VVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQ 483
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 198 TSIAINVSDDTLY--SASLDKTIKVWRI-RDSK--CIETIQAHSEPINALVVA--DDGVL 250
T +A++V L S + DK+I+VWR+ +D + C+ H+ + A+ + + +
Sbjct: 388 TILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFV 447
Query: 251 YSASDDATVRVW 262
++S D T++VW
Sbjct: 448 VTSSQDCTIKVW 459
Score = 70 (29.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 326 QGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383
+GH + +A N + +GS D +++W+ ++L V GH+ I C + F
Sbjct: 487 RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDC---SLLGVFTGHKRGIWC-VQF-- 540
Query: 384 RFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCGHLNKTNGHE 427
D+ + T S DG LK+W + SC L GH+
Sbjct: 541 ----SPVDQI--LATSSADGTLKLWGLQ--DFSC--LKTFEGHD 574
Score = 53 (23.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 107 TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME----VSHDRVYAAYGDGKIRVW 157
TG + I+IW + LK + +V +E +S +++++ D KIR+W
Sbjct: 127 TGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 126 (49.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K +K H ++S+ + D + SAS D TIK W I C+ T + H++ + + +++D
Sbjct: 185 KSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISND 244
Query: 248 GVLY-SASDDATVRVW 262
G L+ SAS D TV VW
Sbjct: 245 GTLFASASLDQTVTVW 260
Score = 50 (22.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 26/86 (30%), Positives = 37/86 (43%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L H + V LA Y+IS + D T RVW E + M A+ H + +AF
Sbjct: 328 LLAHENWVRGLAFHPKGKYLISVADDKTLRVW--ELSAQRCMKAI-EAHEHFVS-TVAF- 382
Query: 383 GRFGEETEDEYCTICTGSLDGVLKMW 408
+T + TGS+D K+W
Sbjct: 383 ----HQTSP---FVITGSVDMSCKVW 401
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 108 (43.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 67 (28.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS +VW
Sbjct: 297 WDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/84 (27%), Positives = 36/84 (42%)
Query: 331 AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
+++C + SVA + +G D +W + R + +L GH + C LG
Sbjct: 268 SIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGER---VGILSGHDNRVSC----LG- 319
Query: 385 FGEETEDEYCTICTGSLDGVLKMW 408
T D + TGS D LK+W
Sbjct: 320 ---VTADGMA-VATGSWDSFLKVW 339
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 108 (43.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 122 FTECGRLKAKTSM--VVAME--VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177
F CG L S+ + + E V R +A+ G + R DN + + + T
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAH-TGYLSCCRFLDDNNI----VTSSGDTT 165
Query: 178 GAVRNLIVGKDK--MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235
A+ ++ G+ K + H G S+A++ S + D + K+W +R+ C +T H
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 236 SEPINALVVADDG-VLYSASDDATVRVW 262
INA+ +G + + SDDA+ R++
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLF 253
Score = 67 (28.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W S + + G L GH + V CL A+ V +GS DS +VW
Sbjct: 297 WDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/84 (27%), Positives = 36/84 (42%)
Query: 331 AVMC-LASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGR 384
+++C + SVA + +G D +W + R + +L GH + C LG
Sbjct: 268 SIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGER---VGILSGHDNRVSC----LG- 319
Query: 385 FGEETEDEYCTICTGSLDGVLKMW 408
T D + TGS D LK+W
Sbjct: 320 ---VTADGMA-VATGSWDSFLKVW 339
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 142 (55.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 59/211 (27%), Positives = 91/211 (43%)
Query: 94 QILCIAVGNG--FIYTGSDSNVIRIWKQ-PEFTE-CGRLKAKTSMVVAMEVSHD----RV 145
QI C + +G FI TGS +VIRI+ E E L++ T VVA + + R
Sbjct: 320 QISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAXQXCXNGKSLRF 379
Query: 146 YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS 205
+ DG R+W+ K + L K G NL +DK+ K +T +A +
Sbjct: 380 VSGSRDGTARIWQYQQQEW-KSIVLDMATKMSG--NNLTSTEDKVTKLK--VTMVAWDRY 434
Query: 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRVW- 262
D T+ +A + +KVW + + T+ H + + L D ++ SA D + +W
Sbjct: 435 DTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWD 494
Query: 263 -------RRYFYS-ENQLHTLILTLTAKYSP 285
R YF E Q H + K+SP
Sbjct: 495 LDRGTKIRNYFNMIEGQGHGAVFD--CKFSP 523
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 121 (47.7 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 41/178 (23%), Positives = 71/178 (39%)
Query: 184 IVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIR-DSKCIETIQAHSEPINA 241
I G + H + S++IN S+ ++ S S D T+++W IR S+ + T H IN+
Sbjct: 195 IFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINS 254
Query: 242 LVVADDGVLY-SASDDATVRVWRRYFYSENQLHTLILTLTAKYSP-VKXXXXXXXXXXXX 299
+ DG + + SDD T R++ + Q+++ P V
Sbjct: 255 VKFFPDGQRFGTGSDDGTCRLFDVRTGHQLQVYSREPDRNDNELPTVTSIAFSISGRLLF 314
Query: 300 XXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCL--ASVANYVISGSADSTSRVWA 355
+ W L G H + CL +S + + +GS D ++WA
Sbjct: 315 AGYSNGDCYVWDTLLAEVVLNLGNLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372
Score = 46 (21.3 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 396 ICTGSLDGVLKMW 408
+CTGS D LK+W
Sbjct: 359 LCTGSWDKNLKIW 371
Score = 43 (20.2 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 125 CGRLKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
C L+ + V +++ + ++ + +A DG++ VW + +KL
Sbjct: 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL 106
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 143 (55.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 52/181 (28%), Positives = 76/181 (41%)
Query: 187 KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVA 245
K + H GP+ + + D L+S S DKTIKVW + KC +T++ H + AL +
Sbjct: 389 KGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI- 447
Query: 246 DDGV-LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXX 304
G LYS S D T+ VW + Q + T+ A +PV
Sbjct: 448 -QGCRLYSGSADCTIIVW------DIQNLQKVNTIRAHDNPV---CTLVSSHNLLFSGSL 497
Query: 305 XXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW-AREQDGRHT 363
I W +L+ L G H V L + +Y+ SGS T ++W R D H
Sbjct: 498 KAIKVWDI--VGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHV 554
Query: 364 M 364
+
Sbjct: 555 L 555
Score = 140 (54.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 61/293 (20%), Positives = 119/293 (40%)
Query: 82 YRCISSVLKKDGQILCIAVGN--GFIYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAM 138
++C + + G + C+ V + +++GS I++W +C + L+ +V+A+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLAL 445
Query: 139 EVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK-----LATIPKT-----GGAVRNL----I 184
+ R+Y+ D I VW V ++ + T+ + G+++ + I
Sbjct: 446 CIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDI 505
Query: 185 VGKD-KMMKHMGPITSI--AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA 241
VG + K+ K + + A+ + LYS S +TIK+W IR CI +Q + +
Sbjct: 506 VGTELKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYS 564
Query: 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ V + ++ ++ + VW S+ Q+ TL + Y+
Sbjct: 565 IAVTNHHIVCGTYENL-IHVWD--IESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 621
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVW 354
+ W + L H +V LA + SG+ DST +VW
Sbjct: 622 DRSLRV------WSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 37 (18.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 2 SSLDSPNPSFAIRETTPTGTAPSTFLRSISTKEPSFSTFPYSPPRFSSPISLHTSP 57
++L +P+ + R T G A S + +I TK ST+ SS SL SP
Sbjct: 17 ANLPTPDTATGTRMETTFGPAFSA-VTTI-TKADGTSTYKQHRRTPSSSSSLAYSP 70
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248
K+ H G I+ I+ N + L + S DKT ++W + +C++ ++ H++ I + G
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 399
Query: 249 -VLYSASDDATVRVWR 263
++ + S D T R+WR
Sbjct: 400 DIIITGSKDNTCRIWR 415
Score = 94 (38.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
++ H I+S N + + S+DKT K+W + KC+ T+ H + I G
Sbjct: 257 LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 250 LYS-ASDDATVRVW 262
L + AS D T R++
Sbjct: 317 LIATASADGTARIF 330
Score = 92 (37.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 189 KMMK-HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD 247
K+++ H+ P+T++A+N S + S D+T K+W + + T++ H + A+ +
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 248 -G-VLYSASDDATVRVW 262
G + + S D T ++W
Sbjct: 146 YGDKIATGSFDKTCKLW 162
Score = 84 (34.6 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI-RCAIAF 381
L+GH + ++ N +++GS+D T+R+W Q G+ L VL GH I CA +
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA-QTGQ--CLQVLEGHTDEIFSCAFNY 397
Query: 382 LGRFGEETEDEYCTICTGSLDGVLKMWR 409
G I TGS D ++WR
Sbjct: 398 KGDI----------IITGSKDNTCRIWR 415
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 325 LQGHTHAVMCLA--SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382
L GH+ ++ L+ + N +I+GS D T VW + GR L+GH I A+
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT-GRKVY--TLIGHCAEISSAV--- 268
Query: 383 GRFGEETEDEYCT-ICTGSLDGVLKMWRVTRPK 414
F + C+ I TGS+D K+W K
Sbjct: 269 --FNWD-----CSLILTGSMDKTCKLWDAVNGK 294
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 107 (42.7 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 193 HMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLY 251
H G + S+++ D L+ S + D + K+W +R+ C +T H INA+ +G +
Sbjct: 83 HTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 141
Query: 252 SA-SDDATVRVW 262
+ SDDAT R++
Sbjct: 142 ATGSDDATCRLF 153
Score = 61 (26.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 314 WFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRVW 354
W + + G L GH + V CL + V +GS DS ++W
Sbjct: 197 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 59 (25.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 342 VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401
+++G D VW + R VL GH + C LG D+ + TGS
Sbjct: 185 LLAGYDDFNCNVWDALKADR---AGVLAGHDNRVSC----LG-----VTDDGMAVATGSW 232
Query: 402 DGVLKMW 408
D LK+W
Sbjct: 233 DSFLKIW 239
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 141 (54.7 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 50/182 (27%), Positives = 90/182 (49%)
Query: 94 QILC--IAVGNGFIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSHD--RV 145
Q++C + G F+ TGS ++IR++ QPE + L+ T V +++ S+ R
Sbjct: 313 QMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPE--KISELEFHTDKVDSIQFSNSSSRF 370
Query: 146 YAAYGDGKIRVW---RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202
+ DG R+W R W + + + +AT P +G ++ + +DK+ K +T +A
Sbjct: 371 VSGSRDGTARIWQFKRREWKSIL--LDMATRP-SGQTLQGV---EDKITKLK--VTMVAW 422
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVR 260
+ D+++ +A + T+KVW + I + H + + L D VL+SA D V
Sbjct: 423 DRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAGHDGNVI 482
Query: 261 VW 262
VW
Sbjct: 483 VW 484
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 80 (33.2 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243
H + ++ ++ S T++SAS D T+++W + CI T H + +V
Sbjct: 467 HTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVV 517
Score = 73 (30.8 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 83 RCISSVLK-KDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
RC K ++C+ + + TGS I+IW E L+ S + ++
Sbjct: 339 RCSIKTFKGHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFD 398
Query: 142 HDRVYAAYGDGKIRVWRSTWDNG 164
++ + D I+VW W G
Sbjct: 399 DTKLISGSMDRTIKVWN--WRTG 419
Score = 71 (30.1 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 327 GHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFG 386
GH V L + ++SG+ D ++W + G+ GH GP+ C RF
Sbjct: 607 GHLEGVWALGADTLRIVSGAEDRMIKIWD-PRTGKCER--TFTGHSGPVTCIGLGDSRFA 663
Query: 387 EETED 391
+ED
Sbjct: 664 TGSED 668
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 123 (48.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYS 252
H G + S+++ T S + D +IK+W +RDS C +T H INA+ +G ++
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 253 A-SDDATVR 260
SDDAT R
Sbjct: 243 TGSDDATCR 251
Score = 43 (20.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 128 LKAKTSMVVAMEVSHDR--VYAAYGDGKIRVWRSTWDNGVKHVKL 170
L+ + + AM D + +A DGK+ +W S N V + L
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 134 (52.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 44/189 (23%), Positives = 85/189 (44%)
Query: 176 TGGAVRNLIV---GKDKMMK----HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC 228
TGGA +N++V ++++ H +TS+ + S D ++SAS D TI++W + ++ C
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 298
Query: 229 IETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVK 287
++ ++AH + L + G L S+SDD + W +S+ Q ++ +T + S
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDD---QYWA---FSDIQTGRVLTKVTDETSGCS 352
Query: 288 XXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-YVISGS 346
K W + GH+ + +A N Y ++ +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQI--KIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 347 ADSTS-RVW 354
AD +S ++W
Sbjct: 411 ADDSSVKLW 419
Score = 91 (37.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE-PINALVVADDGVLY 251
H GPITSIA + + L +A+ D ++K+W +R K +T+Q + + +L+ G Y
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGT-Y 449
Query: 252 SASDDATVRVW 262
A V+++
Sbjct: 450 LALGGTDVQIY 460
Score = 72 (30.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 96 LCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHDRVYAAYGDGK 153
LC + N + G+D NV+ K E LK T V V S D V++A D
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSSEQI-LATLKGHTKKVTSVVFHPSQDLVFSASPDAT 287
Query: 154 IRVW 157
IR+W
Sbjct: 288 IRIW 291
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 111 (44.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 40/182 (21%), Positives = 70/182 (38%)
Query: 180 VRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRD-SKCIETIQAHSE 237
++ + G + H + S++I+ S+ + S S D T ++W R S+ + T H
Sbjct: 190 LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEG 249
Query: 238 PINALVVADDGVLY-SASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXX 296
+N + DG + + SDD T R++ + +QL + PV
Sbjct: 250 DVNTVKFFPDGYRFGTGSDDGTCRLYD--IRTGHQLQVYQPHGDGENGPVTSIAFSVSGR 307
Query: 297 XXXXXXXXXXIHY-WHKGWFSAQLQYGGALQGHTHAVMCLASVAN--YVISGSADSTSRV 353
Y W L G H + + CL A+ + +GS DS ++
Sbjct: 308 LLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKI 367
Query: 354 WA 355
WA
Sbjct: 368 WA 369
Score = 97 (39.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 321 YGGALQ-GHTHAVMCLA---SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIR 376
+GG Q GHT V+ ++ S N+ ISGS DST+R+W R + GH G +
Sbjct: 195 FGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR--AVRTFHGHEGDVN 252
Query: 377 CAIAFLG--RFGEETEDEYCTI 396
F RFG ++D C +
Sbjct: 253 TVKFFPDGYRFGTGSDDGTCRL 274
Score = 65 (27.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 205 SDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV-VADDGVLYSASDDATVRVWR 263
+D YSA+ +T + D C T+Q H+ + +L + + SAS D + VW
Sbjct: 34 TDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWN 93
Query: 264 RYFYSENQLHTLIL----TLTAKYSP 285
+ + H + L +T +SP
Sbjct: 94 AL--TSQKTHAIKLPCAWVMTCAFSP 117
Score = 51 (23.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 125 CGRLKAKTSMVVAMEVS--HDRVYAAYGDGKIRVWRSTWDNGVKHVKL 170
C L+ T V +++ + +R+ +A DG++ VW + +KL
Sbjct: 58 CRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKL 105
Score = 48 (22.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 396 ICTGSLDGVLKMW 408
+CTGS D LK+W
Sbjct: 356 LCTGSWDSNLKIW 368
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/283 (21%), Positives = 112/283 (39%)
Query: 84 CISSVLKKDGQILCIAVGNG--FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVS 141
CI ++ + G +L + N I + S + ++ + R++A + + V
Sbjct: 429 CIRTI--ECGYVLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAIWDLAVG 486
Query: 142 HDRVY--AAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITS 199
HD Y A D +++W +K +P T V L + + + + +
Sbjct: 487 HDGTYFATASADHTVKLW------SLKS-SFDFVPGTTRKVTTLKLEQTRQIDFTDDV-- 537
Query: 200 IAINVSDDTLYSAS--LDKTIKVWRIRDSKCIETIQAHSEPINALVVA-DDGVLYSASDD 256
+A+ +S D + A+ LD T+KV+ + K + H P+ ++ ++ D +L + S D
Sbjct: 538 LAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSAD 597
Query: 257 ATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFS 316
V++W F H I A + + YW F
Sbjct: 598 KNVKIWGLDF---GDCHKSIF---AHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFD 651
Query: 317 AQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359
L+ L+GH V LA +V+SGS D + R+W + D
Sbjct: 652 LILK----LRGHHSEVWALAVGPTFVVSGSHDHSIRLWEQGDD 690
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/166 (25%), Positives = 73/166 (43%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VL 250
H G + + N L+SAS DKT+ VW + ++ ++ H+ +N+ A G +
Sbjct: 98 HSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLA 157
Query: 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYW 310
+ SDD TV++W + +HT T Y V I W
Sbjct: 158 CTGSDDGTVKLWD--IRKKASVHTFQNT----YQ-VLSVTFNDTSDQIISGGIDNDIKVW 210
Query: 311 HKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVW 354
+L Y ++QGH +V + L++ +Y++S S D++ RVW
Sbjct: 211 DLR--QNKLIY--SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/176 (23%), Positives = 70/176 (39%)
Query: 186 GKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC-IETIQAHSEPINALVV 244
G + +H P+TS+ + + D L + +D I+VW IR+ + + T+ +H + I + V
Sbjct: 181 GSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSV 240
Query: 245 ADDGV-LYSASDDATVRVW--RRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
+ DG L S S D + ++W R Y + T +
Sbjct: 241 SKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCG 300
Query: 302 XXXXXIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWARE 357
++ W + QLQY L GH+ V + N I S S ++ E
Sbjct: 301 SSDRQVYIWDTN--TKQLQY--CLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGE 352
Score = 53 (23.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/74 (25%), Positives = 29/74 (39%)
Query: 101 GNGFIYTGSDSNVIRIWKQPEFTEC---GRLKAKTSMVVAMEVSHD--RVYAAYGDGKIR 155
G GSD + +W + EC LK ++ + S D +Y A D I
Sbjct: 74 GTALASGGSDKEIF-LWNV--YGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIG 130
Query: 156 VWRSTWDNGVKHVK 169
VW S +K ++
Sbjct: 131 VWDSNKGELIKRIR 144
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/261 (21%), Positives = 108/261 (41%)
Query: 187 KDKMMKH-MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK---CIETIQAHSEPINAL 242
+D++ K+ + ++ ++ + + L++A D I++W + K I +++ H++ +N +
Sbjct: 22 RDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDI 81
Query: 243 VVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXX 301
V+ +G L SAS D TV+VW + + TL VK
Sbjct: 82 VLCCNGKTLISASSDTTVKVWNAH------KGFCMSTLRTHKDYVKALAYAKDKELVASA 135
Query: 302 XXXXXIHYWHKGWFSAQLQYGG-----ALQGHTHAVMCLA--SVANYVISGSADSTSRVW 354
I W +A +L G+ ++ LA + ++SGS + RVW
Sbjct: 136 GLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW 195
Query: 355 AREQDGRHTM-LAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413
D R L L GH ++ + L R G + C +GS DG +++W + +
Sbjct: 196 ----DPRTCQKLMKLKGHTDNVKALL--LNRDGTQ-----CL--SGSSDGTIRLWSLGQQ 242
Query: 414 KSSCGHLNKTNGHEYFELQEG 434
+ + G ++ EG
Sbjct: 243 RCIATYRVHDEGVWALQVNEG 263
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 113 (44.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H +T ++ + + SAS D+TI++ ++ K ++ + HS +N DG +
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 252 SASDDATVRVW 262
SAS D TV+VW
Sbjct: 366 SASSDGTVKVW 376
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG- 150
DGQ L +GFI + + +I K ++ V+ M S D A G
Sbjct: 225 DGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGA 283
Query: 151 -DGKIRVWR 158
DGKI+VW+
Sbjct: 284 QDGKIKVWK 292
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 396 ICTGSLDGVLKMWR 409
I T S DG+LK+W+
Sbjct: 499 IATYSEDGLLKLWK 512
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 38/153 (24%), Positives = 69/153 (45%)
Query: 217 TIKVWRIRDSKCIETIQAHSEPINALVVADD--GVLYSASDDATVRVWRRYFYS--ENQL 272
TI+V+ + + + +I+AH + +LV+ D GV S D V+ W + EN
Sbjct: 458 TIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVT-SGGADKLVKFWDFELIASQENSK 516
Query: 273 HTLI-LTLTAKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGGALQGHTHA 331
H ++ L+LT K V+ + K +++ +++ +L GH
Sbjct: 517 HKVLNLSLT-KTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLP 575
Query: 332 VMCL--ASVANYVISGSADSTSRVWAREQDGRH 362
VMCL + + +I+GSAD ++W + H
Sbjct: 576 VMCLDISDDSTLIITGSADKNIKIWGLDYGDCH 608
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI 232
H I S++++ +D L S S +++KVW ++ CI +I
Sbjct: 395 HRSDIRSLSLSSNDQMLVSTS-SESVKVWNMKSLSCIRSI 433
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 105 IYTGSDSNVIRIWKQPEFTECGR-LKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWR 158
+ T S I+IW E C + + + + ++V+ D R+ + D +IR WR
Sbjct: 158 LITSSKDGFIKIW-DTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWR 213
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 150 (57.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 94 QILC--IAVGNGFIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSH--DRV 145
Q++C + G F+ TGS ++IR++ QPE + L+ T V +++ S+ +R
Sbjct: 260 QMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPE--KISELEFHTDKVDSIQFSNTSNRF 317
Query: 146 YAAYGDGKIRVW---RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202
+ DG R+W R W + + + +AT P A +NL +DK+ K +T +A
Sbjct: 318 VSGSRDGTARIWQFKRREWKSIL--LDMATRP----AGQNLQGIEDKITKMK--VTMVAW 369
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVR 260
+ D+T+ +A + T+KVW + I + H + + L D VL+SA D V
Sbjct: 370 DRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVI 429
Query: 261 VW 262
VW
Sbjct: 430 VW 431
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 413 PKSSCGHLNKTN 424
P S+C L++TN
Sbjct: 1626 PSSTCSFLSETN 1637
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/234 (23%), Positives = 99/234 (42%)
Query: 187 KDKMMKH-MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALV 243
+D++ K+ + ++ ++ + + L++A D I++W + K I +++ H++ +N +V
Sbjct: 22 RDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIV 81
Query: 244 VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXX 302
+ +G L SAS D TV+VW + + TL VK
Sbjct: 82 LCCNGKTLISASSDTTVKVWNAH------KGFCMSTLRTHKDYVKALAYAKDKELVASAG 135
Query: 303 XXXXIHYWHKGWFSAQLQYGG-----ALQGHTHAVMCLA--SVANYVISGSADSTSRVWA 355
I W +A +L G+ ++ LA + ++SGS + RVW
Sbjct: 136 LDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW- 194
Query: 356 REQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408
D R L L GH ++ + L R G + C +GS DG +++W
Sbjct: 195 ---DPRTCAKLMKLKGHTDNVKSLL--LNRDGTQ-----CL--SGSSDGTIRLW 236
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 46/177 (25%), Positives = 69/177 (38%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H + I + + TL SAS D T+KVW C+ T++ H + + AL A D
Sbjct: 70 MEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE 129
Query: 250 LY-SASDDATVRVW-----RRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXX 303
L SA D + +W S N + T +L+ +
Sbjct: 130 LVASAGLDRQIFLWDVNTLTALTASNNTVTTS--SLSGNKDSIYSLAMNQMGTVIVSGST 187
Query: 304 XXXIHYWHKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQ 358
+ W A+L L+GHT V + L +SGS+D T R+W+ Q
Sbjct: 188 EKVLRVWDPRT-CAKLM---KLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQ 240
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 150 (57.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 94 QILC--IAVGNGFIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSH--DRV 145
Q++C + G F+ TGS ++IR++ QPE + L+ T V +++ S+ +R
Sbjct: 323 QMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPE--KISELEFHTDKVDSIQFSNTSNRF 380
Query: 146 YAAYGDGKIRVW---RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202
+ DG R+W R W + + + +AT P A +NL +DK+ K +T +A
Sbjct: 381 VSGSRDGTARIWQFKRREWKSIL--LDMATRP----AGQNLQGIEDKITKMK--VTMVAW 432
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVR 260
+ D+T+ +A + T+KVW + I + H + + L D VL+SA D V
Sbjct: 433 DRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVI 492
Query: 261 VW 262
VW
Sbjct: 493 VW 494
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 413 PKSSCGHLNKTN 424
P S+C L++TN
Sbjct: 1688 PSSTCNFLSETN 1699
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 150 (57.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 94 QILC--IAVGNGFIYTGSDSNVIRIW----KQPEFTECGRLKAKTSMVVAMEVSH--DRV 145
Q++C + G F+ TGS ++IR++ QPE + L+ T V +++ S+ +R
Sbjct: 323 QMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPE--KISELEFHTDKVDSIQFSNTSNRF 380
Query: 146 YAAYGDGKIRVW---RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202
+ DG R+W R W + + + +AT P A +NL +DK+ K +T +A
Sbjct: 381 VSGSRDGTARIWQFKRREWKSIL--LDMATRP----AGQNLQGIEDKITKMK--VTMVAW 432
Query: 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVR 260
+ D+T+ +A + T+KVW + I + H + + L D VL+SA D V
Sbjct: 433 DRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVI 492
Query: 261 VW 262
VW
Sbjct: 493 VW 494
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 413 PKSSCGHLNKTN 424
P S+C L++TN
Sbjct: 1688 PSSTCNFLSETN 1699
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 96 (38.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 188 DKMMK-HMGPITSIAINVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVA 245
+KM+K H I I L + S D TIK+W + + I T+ H ++++ +
Sbjct: 159 EKMIKAHTRAINKICFTYKKPYYLATCSSDLTIKIWDEKFNH-IRTLNGHEHTVSSIQFS 217
Query: 246 --DDGVLYSASDDATVRVW 262
D+ +LYS S D +RVW
Sbjct: 218 PVDNSILYSVSRDKNIRVW 236
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 325 LQGHTHAV--MCLASVANYVISGSADSTSRVWARE---QDGRHTMLAVLVGHRGPIR-CA 378
L+GH+ V +C+ ++ISGS D T + W + G ++ ++GH G I
Sbjct: 387 LKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLSGLLETGYVNVVKTIIGHDGFINDID 446
Query: 379 IAFLGRFGEETEDEY---------CTICTGSLDGVLKMW 408
A L + +E++ C +GS D +K+W
Sbjct: 447 FARLKEASDVSEEDLLKQVEKRMRCLFISGSADNSIKLW 485
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 59/256 (23%), Positives = 107/256 (41%)
Query: 170 LATIPKTGGAVRNLI----VGKDKMMKH-MGPITSIAINVSDDTLYSASLDKTIKVWRIR 224
+AT+ + A R + V +D++ K+ + ++ ++ + + L++A D I++W +
Sbjct: 1 MATLHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN 60
Query: 225 DSK---CIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT 280
K I +++ H++ +N +++ +G L SAS D TV+VW + + TL
Sbjct: 61 QHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAH------KGFCMSTLR 114
Query: 281 AKYSPVKXXXXXXXXXXXXXXXXXXXIHYWHKGWFSAQLQYGG-----ALQGHTHAVMCL 335
VK I W +A +L G+ ++ L
Sbjct: 115 THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 336 A--SVANYVISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDE 392
A +ISGS + RVW D R L L GH ++ + L R G +
Sbjct: 175 AMNQTGTVIISGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKSLL--LNRDGTQ---- 224
Query: 393 YCTICTGSLDGVLKMW 408
C +GS DG +++W
Sbjct: 225 -CL--SGSSDGTIRLW 237
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 46/177 (25%), Positives = 69/177 (38%)
Query: 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249
M H + I + + TL SAS D T+KVW C+ T++ H + + AL A D
Sbjct: 71 MEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE 130
Query: 250 LY-SASDDATVRVW-----RRYFYSENQLHTLILTLTAKYSPVKXXXXXXXXXXXXXXXX 303
L SA D + +W S N + T +L+ +
Sbjct: 131 LVASAGLDRQIFLWDVNTLTALTASNNTVTTS--SLSGNKDSIYSLAMNQTGTVIISGST 188
Query: 304 XXXIHYWHKGWFSAQLQYGGALQGHTHAV--MCLASVANYVISGSADSTSRVWAREQ 358
+ W A+L L+GHT V + L +SGS+D T R+W+ Q
Sbjct: 189 EKVLRVWDPRT-CAKLM---KLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQ 241
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 112 (44.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H +T ++ + + SAS D+TI++ ++ K ++ + HS +N DG +
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 252 SASDDATVRVW 262
SAS D TV++W
Sbjct: 366 SASSDGTVKIW 376
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG- 150
DGQ L +GFI + + +I K ++ V+ M S D A G
Sbjct: 225 DGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGA 283
Query: 151 -DGKIRVWR 158
DGKI+VW+
Sbjct: 284 QDGKIKVWK 292
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 396 ICTGSLDGVLKMWR 409
I T S DG+LK+W+
Sbjct: 499 IATYSEDGLLKLWK 512
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 112 (44.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY 251
H +T ++ + + SAS D+TI++ ++ K ++ + HS +N DG +
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 252 SASDDATVRVW 262
SAS D TV++W
Sbjct: 366 SASSDGTVKIW 376
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYG- 150
DGQ L +GFI + + +I K ++ V+ M S D A G
Sbjct: 225 DGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGA 283
Query: 151 -DGKIRVWR 158
DGKI+VW+
Sbjct: 284 QDGKIKVWK 292
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 396 ICTGSLDGVLKMWR 409
I T S DG+LK+W+
Sbjct: 499 IATYSEDGLLKLWK 512
WARNING: HSPs involving 186 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 400 0.00098 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 436
No. of states in DFA: 615 (65 KB)
Total size of DFA: 286 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.38u 0.08s 32.46t Elapsed: 00:00:02
Total cpu time: 32.45u 0.08s 32.53t Elapsed: 00:00:02
Start: Sat May 11 02:18:28 2013 End: Sat May 11 02:18:30 2013
WARNINGS ISSUED: 2