Query 046226
Match_columns 434
No_of_seqs 793 out of 4093
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 17:20:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 9.1E-48 3.1E-52 356.0 36.3 283 85-411 101-410 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 1.9E-46 6.6E-51 338.6 41.6 289 82-409 45-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 7.8E-47 2.7E-51 337.9 37.7 286 82-411 22-320 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 1.7E-45 5.7E-50 334.0 38.5 291 83-409 55-354 (354)
5 2hes_X YDR267CP; beta-propelle 100.0 3.3E-45 1.1E-49 329.0 40.0 305 80-412 2-328 (330)
6 2ynn_A Coatomer subunit beta'; 100.0 6E-45 2.1E-49 323.5 39.3 288 83-413 4-303 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.9E-45 2.7E-49 328.6 40.7 305 81-417 4-340 (345)
8 4ery_A WD repeat-containing pr 100.0 4.3E-44 1.5E-48 319.6 42.9 289 80-411 11-311 (312)
9 4g56_B MGC81050 protein; prote 100.0 1.8E-45 6.1E-50 334.1 34.4 291 88-416 38-347 (357)
10 3iz6_a 40S ribosomal protein R 100.0 6.9E-46 2.4E-50 340.1 31.6 304 80-415 54-378 (380)
11 4gqb_B Methylosome protein 50; 100.0 4.1E-45 1.4E-49 329.1 35.4 286 91-415 29-334 (344)
12 1nr0_A Actin interacting prote 100.0 2.8E-44 9.7E-49 349.5 40.5 347 48-411 140-610 (611)
13 3frx_A Guanine nucleotide-bind 100.0 5.1E-44 1.7E-48 319.7 38.5 287 80-413 5-318 (319)
14 2xzm_R RACK1; ribosome, transl 100.0 1.5E-43 5.1E-48 320.2 39.7 290 80-414 9-342 (343)
15 1erj_A Transcriptional repress 100.0 3.3E-43 1.1E-47 323.8 37.9 294 88-413 60-390 (393)
16 1nr0_A Actin interacting prote 100.0 5.4E-43 1.8E-47 340.5 39.0 316 56-415 19-358 (611)
17 4aow_A Guanine nucleotide-bind 100.0 2.7E-42 9.4E-47 311.6 38.8 291 79-414 25-339 (340)
18 2ymu_A WD-40 repeat protein; u 100.0 9.5E-43 3.2E-47 337.5 35.7 313 47-409 254-577 (577)
19 2ynn_A Coatomer subunit beta'; 100.0 1E-41 3.5E-46 302.7 36.5 253 123-417 4-264 (304)
20 2ymu_A WD-40 repeat protein; u 100.0 1.5E-41 5.2E-46 329.1 37.9 315 47-411 213-538 (577)
21 1vyh_C Platelet-activating fac 100.0 3E-42 1E-46 319.0 30.8 278 48-357 101-410 (410)
22 3ow8_A WD repeat-containing pr 100.0 3.8E-42 1.3E-46 307.5 29.3 277 49-357 26-320 (321)
23 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.4E-41 1.9E-45 314.6 38.5 318 48-413 111-443 (445)
24 3zwl_B Eukaryotic translation 100.0 3.9E-40 1.3E-44 300.8 41.0 291 79-414 19-348 (369)
25 1sq9_A Antiviral protein SKI8; 100.0 3.4E-41 1.2E-45 311.3 34.2 294 82-414 6-397 (397)
26 3dm0_A Maltose-binding peripla 100.0 2.6E-40 8.9E-45 326.8 39.5 284 82-411 372-692 (694)
27 1gxr_A ESG1, transducin-like e 100.0 8.4E-40 2.9E-44 294.8 39.0 311 55-411 9-336 (337)
28 3ei3_B DNA damage-binding prot 100.0 6.7E-40 2.3E-44 301.1 38.8 294 80-412 61-382 (383)
29 1got_B GT-beta; complex (GTP-b 100.0 9.1E-41 3.1E-45 301.4 32.4 277 47-355 47-340 (340)
30 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-39 4.6E-44 290.4 38.8 289 80-417 6-301 (313)
31 3v7d_B Cell division control p 100.0 2.5E-39 8.5E-44 305.1 41.5 287 84-418 113-427 (464)
32 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-39 1E-43 302.8 41.4 285 82-417 108-396 (445)
33 3k26_A Polycomb protein EED; W 100.0 9.3E-41 3.2E-45 304.6 30.0 298 82-412 7-366 (366)
34 4gqb_B Methylosome protein 50; 100.0 8.7E-41 3E-45 300.9 29.1 272 54-359 29-332 (344)
35 4e54_B DNA damage-binding prot 100.0 3.5E-41 1.2E-45 314.6 25.7 301 78-415 105-433 (435)
36 4h5i_A Guanine nucleotide-exch 100.0 5.6E-40 1.9E-44 298.7 32.5 291 92-413 14-344 (365)
37 1k8k_C P40, ARP2/3 complex 41 100.0 4.8E-40 1.6E-44 300.7 32.3 296 88-416 4-365 (372)
38 1p22_A F-BOX/WD-repeat protein 100.0 4.7E-40 1.6E-44 307.2 32.6 281 89-417 130-419 (435)
39 1r5m_A SIR4-interacting protei 100.0 3.2E-40 1.1E-44 307.2 31.3 330 53-411 43-424 (425)
40 3vl1_A 26S proteasome regulato 100.0 9.5E-40 3.3E-44 303.9 33.8 316 57-412 58-419 (420)
41 3gre_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 305.6 33.1 318 63-409 35-437 (437)
42 3i2n_A WD repeat-containing pr 100.0 1.9E-39 6.4E-44 295.0 33.8 292 85-414 11-355 (357)
43 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-39 8.9E-44 292.5 34.2 292 49-359 9-336 (345)
44 3dwl_C Actin-related protein 2 100.0 2.1E-40 7.1E-45 303.8 27.3 297 88-410 7-377 (377)
45 2pm9_A Protein WEB1, protein t 100.0 3.7E-41 1.3E-45 312.9 21.7 320 57-413 14-415 (416)
46 3frx_A Guanine nucleotide-bind 100.0 3.8E-39 1.3E-43 288.1 32.8 280 49-359 11-318 (319)
47 4a11_B DNA excision repair pro 100.0 4.5E-39 1.5E-43 297.9 33.4 301 82-417 33-370 (408)
48 1r5m_A SIR4-interacting protei 100.0 7.2E-39 2.5E-43 298.1 33.5 282 88-414 41-363 (425)
49 4aez_A CDC20, WD repeat-contai 100.0 4.4E-38 1.5E-42 290.7 37.5 285 90-419 89-387 (401)
50 3iz6_a 40S ribosomal protein R 100.0 3.5E-40 1.2E-44 302.2 22.9 291 46-359 57-376 (380)
51 2hes_X YDR267CP; beta-propelle 100.0 2.7E-38 9.3E-43 283.9 34.6 263 120-414 2-282 (330)
52 2pbi_B Guanine nucleotide-bind 100.0 6.9E-39 2.4E-43 290.5 31.0 280 46-355 55-354 (354)
53 4g56_B MGC81050 protein; prote 100.0 1.9E-39 6.5E-44 294.4 24.4 275 52-359 39-344 (357)
54 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-38 4.2E-43 334.9 33.9 327 50-416 610-1038(1249)
55 2j04_B YDR362CP, TAU91; beta p 100.0 3.1E-39 1.1E-43 305.0 26.4 304 66-413 172-518 (524)
56 2pm7_B Protein transport prote 100.0 4E-38 1.4E-42 278.6 31.8 253 126-413 3-286 (297)
57 2xzm_R RACK1; ribosome, transl 100.0 2E-38 6.7E-43 286.6 29.8 283 49-359 15-341 (343)
58 1pgu_A Actin interacting prote 100.0 2.2E-37 7.4E-42 302.1 39.3 331 46-414 54-574 (615)
59 2pm7_B Protein transport prote 100.0 1.8E-37 6.3E-42 274.3 34.8 260 85-366 2-293 (297)
60 1erj_A Transcriptional repress 100.0 5.1E-38 1.7E-42 289.2 32.3 279 53-359 62-390 (393)
61 2pm9_A Protein WEB1, protein t 100.0 9.9E-39 3.4E-43 296.6 27.7 286 91-416 11-341 (416)
62 4gga_A P55CDC, cell division c 100.0 1.8E-37 6.1E-42 288.3 35.9 279 93-415 106-398 (420)
63 3v7d_B Cell division control p 100.0 2.6E-37 8.8E-42 291.3 36.4 329 48-410 114-461 (464)
64 2oaj_A Protein SNI1; WD40 repe 100.0 5.2E-38 1.8E-42 316.3 32.8 341 52-415 14-608 (902)
65 3vl1_A 26S proteasome regulato 100.0 1.8E-38 6.1E-43 295.3 26.8 276 95-414 59-367 (420)
66 3bg1_A Protein SEC13 homolog; 100.0 5.1E-38 1.8E-42 280.4 28.6 262 88-372 9-307 (316)
67 4ggc_A P55CDC, cell division c 100.0 9.6E-37 3.3E-41 272.6 36.3 276 95-414 28-317 (318)
68 1pgu_A Actin interacting prote 100.0 3.6E-37 1.2E-41 300.5 36.3 330 48-412 153-614 (615)
69 1yfq_A Cell cycle arrest prote 100.0 2.2E-37 7.7E-42 279.7 31.9 282 85-410 4-322 (342)
70 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-37 4.1E-42 327.4 34.7 354 47-417 649-1121(1249)
71 1gxr_A ESG1, transducin-like e 100.0 4.2E-37 1.4E-41 277.2 33.3 284 91-416 8-300 (337)
72 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-37 7.1E-42 280.2 31.2 298 86-416 5-341 (351)
73 4ery_A WD repeat-containing pr 100.0 1.7E-36 5.8E-41 270.4 35.5 253 122-416 13-272 (312)
74 3mmy_A MRNA export factor; mRN 100.0 6.1E-37 2.1E-41 279.5 32.5 304 69-414 16-348 (368)
75 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-36 7.6E-41 304.6 38.5 290 83-415 4-305 (814)
76 3bg1_A Protein SEC13 homolog; 100.0 4.6E-37 1.6E-41 274.2 25.2 254 127-413 8-294 (316)
77 2oaj_A Protein SNI1; WD40 repe 100.0 8E-36 2.7E-40 300.5 36.3 198 88-316 13-244 (902)
78 1k8k_C P40, ARP2/3 complex 41 100.0 9.1E-36 3.1E-40 272.3 32.6 284 51-359 4-362 (372)
79 3dw8_B Serine/threonine-protei 100.0 3.2E-36 1.1E-40 282.4 30.0 298 90-410 26-444 (447)
80 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-36 8.8E-41 281.9 29.1 275 53-359 131-415 (435)
81 4aez_A CDC20, WD repeat-contai 100.0 1.5E-35 5E-40 273.8 32.6 276 53-359 89-381 (401)
82 3jrp_A Fusion protein of prote 100.0 2.3E-35 8E-40 270.2 33.1 263 83-367 2-296 (379)
83 3jrp_A Fusion protein of prote 100.0 5.2E-36 1.8E-40 274.5 28.3 258 123-413 2-288 (379)
84 4aow_A Guanine nucleotide-bind 100.0 4E-35 1.4E-39 264.6 32.4 283 48-359 31-338 (340)
85 3dwl_C Actin-related protein 2 100.0 6.2E-36 2.1E-40 274.1 27.1 282 52-356 8-377 (377)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-35 7.3E-40 272.8 30.6 283 97-414 39-344 (402)
87 3mkq_A Coatomer beta'-subunit; 100.0 3E-35 1E-39 296.4 34.0 323 48-412 6-386 (814)
88 3dm0_A Maltose-binding peripla 100.0 2E-35 6.7E-40 292.0 31.0 281 50-357 377-692 (694)
89 1sq9_A Antiviral protein SKI8; 100.0 1.7E-35 5.7E-40 273.1 27.6 292 49-359 10-396 (397)
90 3k26_A Polycomb protein EED; W 100.0 9.2E-36 3.1E-40 271.5 25.4 286 52-357 15-365 (366)
91 2j04_A TAU60, YPL007P, hypothe 100.0 4E-35 1.4E-39 270.3 24.8 267 91-411 14-296 (588)
92 3zwl_B Eukaryotic translation 100.0 7.8E-34 2.7E-38 259.0 33.2 288 49-359 26-347 (369)
93 3odt_A Protein DOA1; ubiquitin 100.0 4E-34 1.4E-38 254.9 28.6 277 45-359 8-297 (313)
94 3i2n_A WD repeat-containing pr 100.0 2.1E-34 7.1E-39 261.7 27.0 290 50-359 13-354 (357)
95 3gre_A Serine/threonine-protei 100.0 2.1E-33 7.3E-38 262.4 32.0 258 116-417 47-364 (437)
96 3ei3_B DNA damage-binding prot 100.0 1.1E-33 3.7E-38 259.7 28.5 259 116-417 57-344 (383)
97 4gga_A P55CDC, cell division c 100.0 1.3E-32 4.6E-37 255.5 35.0 252 76-359 124-396 (420)
98 3jro_A Fusion protein of prote 100.0 6.3E-34 2.2E-38 282.8 27.5 253 85-359 2-286 (753)
99 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-34 1.1E-38 270.8 24.0 261 91-413 132-429 (524)
100 4h5i_A Guanine nucleotide-exch 100.0 1.2E-33 4.2E-38 256.9 26.4 275 56-359 15-344 (365)
101 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-33 5.3E-38 254.5 25.6 277 101-412 47-333 (343)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.9E-32 6.6E-37 256.7 33.8 285 92-413 4-392 (450)
103 2w18_A PALB2, fancn, partner a 100.0 1.5E-32 5.2E-37 238.0 29.3 293 80-410 23-355 (356)
104 3vu4_A KMHSV2; beta-propeller 100.0 4.8E-33 1.6E-37 252.2 26.2 290 80-416 7-340 (355)
105 3dw8_B Serine/threonine-protei 100.0 9E-33 3.1E-37 258.9 28.6 256 131-416 27-377 (447)
106 3jro_A Fusion protein of prote 100.0 1.1E-33 3.7E-38 281.1 23.3 256 126-414 3-287 (753)
107 2xyi_A Probable histone-bindin 100.0 1.6E-32 5.6E-37 255.6 29.5 261 126-413 122-411 (430)
108 3mmy_A MRNA export factor; mRN 100.0 4.1E-32 1.4E-36 247.4 31.3 264 115-417 22-309 (368)
109 4a11_B DNA excision repair pro 100.0 1.2E-32 4.2E-37 254.6 26.7 323 48-412 36-405 (408)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 5.2E-33 1.8E-37 256.8 24.0 267 68-359 48-343 (402)
111 4e54_B DNA damage-binding prot 100.0 9.7E-33 3.3E-37 257.5 26.0 254 124-417 111-392 (435)
112 3f3f_A Nucleoporin SEH1; struc 100.0 3.8E-32 1.3E-36 245.6 28.2 306 47-371 3-350 (351)
113 2xyi_A Probable histone-bindin 100.0 1.6E-32 5.5E-37 255.6 26.2 254 86-359 122-411 (430)
114 4gq1_A NUP37; propeller, trans 100.0 5.2E-32 1.8E-36 248.9 29.2 234 144-411 103-388 (393)
115 1yfq_A Cell cycle arrest prote 100.0 7.3E-32 2.5E-36 243.5 29.7 257 126-417 5-287 (342)
116 4ggc_A P55CDC, cell division c 100.0 7.1E-31 2.4E-35 234.5 33.9 258 69-359 38-316 (318)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1E-32 3.5E-37 254.4 20.7 289 56-401 16-350 (588)
118 3bws_A Protein LP49; two-domai 100.0 1.3E-29 4.4E-34 236.5 36.4 281 83-412 114-432 (433)
119 1l0q_A Surface layer protein; 100.0 1E-29 3.5E-34 233.9 35.0 264 103-416 3-279 (391)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-29 6.1E-34 236.6 30.9 244 89-359 99-392 (450)
121 3vu4_A KMHSV2; beta-propeller 100.0 2.1E-29 7E-34 228.3 29.1 249 116-414 3-273 (355)
122 1l0q_A Surface layer protein; 100.0 8.7E-28 3E-32 221.0 37.0 294 81-415 21-345 (391)
123 3lrv_A PRE-mRNA-splicing facto 100.0 2.5E-29 8.7E-34 226.9 24.1 227 143-415 49-295 (343)
124 4gq1_A NUP37; propeller, trans 100.0 7.9E-29 2.7E-33 227.7 22.9 234 91-357 88-388 (393)
125 2w18_A PALB2, fancn, partner a 100.0 3.1E-27 1.1E-31 204.9 23.7 177 110-312 155-355 (356)
126 3bws_A Protein LP49; two-domai 100.0 3.1E-26 1.1E-30 213.6 32.3 266 108-416 95-394 (433)
127 1nir_A Nitrite reductase; hemo 100.0 6.6E-26 2.3E-30 215.8 30.8 278 101-416 148-462 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 7.8E-26 2.7E-30 209.0 29.7 271 94-414 64-389 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.1E-25 2.4E-29 202.5 25.9 256 86-383 111-408 (415)
130 1nir_A Nitrite reductase; hemo 99.9 3.9E-23 1.3E-27 196.7 34.9 323 64-417 146-519 (543)
131 3u4y_A Uncharacterized protein 99.9 1.2E-22 4.2E-27 182.1 34.4 276 101-414 9-306 (331)
132 1ri6_A Putative isomerase YBHE 99.9 4.1E-23 1.4E-27 186.0 31.3 273 104-411 7-307 (343)
133 2ecf_A Dipeptidyl peptidase IV 99.9 4.1E-23 1.4E-27 205.7 29.1 281 92-412 36-413 (741)
134 1pby_B Quinohemoprotein amine 99.9 5.4E-23 1.8E-27 184.8 26.7 269 103-416 2-314 (337)
135 2ojh_A Uncharacterized protein 99.9 3.3E-23 1.1E-27 182.4 23.6 254 107-403 17-293 (297)
136 3hfq_A Uncharacterized protein 99.9 2.3E-21 7.9E-26 175.1 33.2 277 104-411 4-316 (347)
137 3vgz_A Uncharacterized protein 99.9 6.6E-21 2.3E-25 172.4 33.3 280 91-403 39-335 (353)
138 1k32_A Tricorn protease; prote 99.9 4.8E-22 1.6E-26 204.8 26.8 315 49-414 46-463 (1045)
139 2ecf_A Dipeptidyl peptidase IV 99.9 3.3E-22 1.1E-26 199.2 23.5 327 56-413 37-460 (741)
140 2z3z_A Dipeptidyl aminopeptida 99.9 6E-22 2.1E-26 196.2 23.7 275 98-414 31-393 (706)
141 1ri6_A Putative isomerase YBHE 99.9 1.8E-20 6.1E-25 168.7 30.5 272 89-383 34-333 (343)
142 2z3z_A Dipeptidyl aminopeptida 99.9 7.6E-21 2.6E-25 188.3 28.7 291 93-414 82-437 (706)
143 2oit_A Nucleoporin 214KDA; NH2 99.9 8.3E-21 2.8E-25 175.9 26.5 200 93-315 37-279 (434)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-20 3.5E-25 175.3 26.6 226 112-359 23-279 (434)
145 1xfd_A DIP, dipeptidyl aminope 99.9 6.8E-22 2.3E-26 196.4 18.2 279 95-413 19-394 (723)
146 3o4h_A Acylamino-acid-releasin 99.9 8.9E-21 3.1E-25 183.4 24.8 265 91-412 20-315 (582)
147 1k32_A Tricorn protease; prote 99.9 4.8E-20 1.7E-24 189.9 30.7 274 91-414 294-639 (1045)
148 2ojh_A Uncharacterized protein 99.9 9.4E-21 3.2E-25 166.6 21.5 224 148-415 18-261 (297)
149 1xfd_A DIP, dipeptidyl aminope 99.9 7.6E-20 2.6E-24 181.7 29.9 313 58-383 19-420 (723)
150 3vgz_A Uncharacterized protein 99.9 1.9E-19 6.6E-24 162.7 29.6 242 132-416 40-307 (353)
151 3u4y_A Uncharacterized protein 99.9 1.8E-19 6.2E-24 161.4 28.4 251 81-359 29-305 (331)
152 1jmx_B Amine dehydrogenase; ox 99.9 6.2E-20 2.1E-24 165.6 25.0 264 101-417 10-330 (349)
153 3scy_A Hypothetical bacterial 99.9 3.7E-18 1.3E-22 154.9 35.3 277 104-411 15-336 (361)
154 3scy_A Hypothetical bacterial 99.9 2.1E-18 7.3E-23 156.5 32.6 276 91-381 48-360 (361)
155 3hfq_A Uncharacterized protein 99.9 2.7E-18 9.3E-23 154.9 32.0 255 89-357 36-316 (347)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.2E-18 4.2E-23 158.2 28.6 276 104-413 4-342 (365)
157 1pby_B Quinohemoprotein amine 99.8 8.5E-19 2.9E-23 157.3 23.3 249 82-371 21-320 (337)
158 2oiz_A Aromatic amine dehydrog 99.8 2.6E-17 8.8E-22 148.8 30.4 271 110-418 29-342 (361)
159 1z68_A Fibroblast activation p 99.8 3.5E-19 1.2E-23 176.7 16.9 277 97-412 20-391 (719)
160 3pe7_A Oligogalacturonate lyas 99.8 1.3E-17 4.4E-22 152.8 24.8 286 83-413 21-383 (388)
161 1z68_A Fibroblast activation p 99.8 5E-18 1.7E-22 168.5 22.8 322 61-414 21-445 (719)
162 3o4h_A Acylamino-acid-releasin 99.8 1E-17 3.5E-22 162.0 20.4 226 132-410 21-274 (582)
163 3azo_A Aminopeptidase; POP fam 99.8 5.7E-16 1.9E-20 152.2 28.9 291 88-414 19-371 (662)
164 1q7f_A NHL, brain tumor CG1071 99.8 5.6E-15 1.9E-19 129.2 31.8 245 130-414 27-282 (286)
165 1jmx_B Amine dehydrogenase; ox 99.7 8.6E-16 2.9E-20 138.4 25.5 261 63-371 7-335 (349)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.2E-15 4.1E-20 138.4 26.5 247 92-359 39-342 (365)
167 4a5s_A Dipeptidyl peptidase 4 99.7 1.2E-16 4.1E-21 158.7 20.6 273 94-414 18-355 (740)
168 1q7f_A NHL, brain tumor CG1071 99.7 1.4E-14 4.9E-19 126.6 31.4 234 91-359 28-281 (286)
169 3fvz_A Peptidyl-glycine alpha- 99.7 4.2E-15 1.4E-19 132.7 27.5 204 193-413 89-323 (329)
170 2dg1_A DRP35, lactonase; beta 99.7 7.5E-15 2.6E-19 131.4 27.2 263 94-402 7-300 (333)
171 2gop_A Trilobed protease; beta 99.7 2.3E-14 7.9E-19 129.0 30.4 254 95-411 17-330 (347)
172 3c5m_A Oligogalacturonate lyas 99.7 1.6E-16 5.5E-21 145.8 16.3 283 95-411 38-381 (396)
173 3azo_A Aminopeptidase; POP fam 99.7 1.5E-15 5E-20 149.3 21.1 227 101-359 89-370 (662)
174 3pe7_A Oligogalacturonate lyas 99.7 4.8E-15 1.6E-19 135.7 22.5 256 116-415 14-332 (388)
175 3fvz_A Peptidyl-glycine alpha- 99.7 5.4E-14 1.8E-18 125.5 28.5 247 92-359 23-323 (329)
176 1qks_A Cytochrome CD1 nitrite 99.7 1.5E-13 5.3E-18 130.4 32.9 275 101-413 166-478 (567)
177 2z2n_A Virginiamycin B lyase; 99.7 3.4E-12 1.2E-16 112.0 38.8 276 90-413 12-296 (299)
178 4a5s_A Dipeptidyl peptidase 4 99.7 4.2E-14 1.4E-18 140.4 28.3 322 59-414 20-451 (740)
179 3dsm_A Uncharacterized protein 99.7 1.5E-13 5.1E-18 122.5 29.2 262 110-417 15-306 (328)
180 2dg1_A DRP35, lactonase; beta 99.7 6E-13 2.1E-17 119.0 32.8 267 58-348 8-300 (333)
181 2xdw_A Prolyl endopeptidase; a 99.7 1.4E-13 4.8E-18 136.1 30.6 243 131-414 123-416 (710)
182 2oiz_A Aromatic amine dehydrog 99.6 1.1E-13 3.6E-18 125.1 26.0 264 81-383 40-358 (361)
183 3no2_A Uncharacterized protein 99.6 1.9E-13 6.6E-18 118.3 25.6 213 141-399 3-230 (276)
184 2bkl_A Prolyl endopeptidase; m 99.6 4.3E-14 1.5E-18 139.3 24.4 274 100-415 77-400 (695)
185 3e5z_A Putative gluconolactona 99.6 3.1E-13 1.1E-17 118.7 26.6 242 123-413 18-287 (296)
186 2mad_H Methylamine dehydrogena 99.6 3.3E-12 1.1E-16 115.4 33.9 279 101-418 31-356 (373)
187 1rwi_B Serine/threonine-protei 99.6 3E-13 1E-17 117.0 24.8 236 134-415 25-267 (270)
188 3dsm_A Uncharacterized protein 99.6 7.9E-13 2.7E-17 117.8 27.8 241 94-369 45-309 (328)
189 1rwi_B Serine/threonine-protei 99.6 6.4E-13 2.2E-17 115.0 26.1 234 94-359 25-265 (270)
190 3e5z_A Putative gluconolactona 99.6 1.2E-12 4E-17 115.0 26.6 240 86-358 21-286 (296)
191 3no2_A Uncharacterized protein 99.6 1.5E-12 5.1E-17 112.6 26.7 237 101-371 4-262 (276)
192 3c5m_A Oligogalacturonate lyas 99.6 3.2E-14 1.1E-18 130.5 16.7 251 116-415 14-332 (396)
193 3sjl_D Methylamine dehydrogena 99.6 2.8E-12 9.5E-17 114.4 27.3 281 101-417 43-368 (386)
194 2qc5_A Streptogramin B lactona 99.6 1E-10 3.5E-15 102.6 36.9 273 91-411 18-299 (300)
195 1yr2_A Prolyl oligopeptidase; 99.5 1.3E-12 4.6E-17 129.6 25.5 273 100-414 116-443 (741)
196 2gop_A Trilobed protease; beta 99.5 2E-12 6.9E-17 116.2 24.2 185 196-414 60-293 (347)
197 3c75_H MADH, methylamine dehyd 99.5 6.5E-12 2.2E-16 114.1 25.7 282 101-418 83-408 (426)
198 3q7m_A Lipoprotein YFGL, BAMB; 99.5 3E-11 1E-15 109.9 30.1 269 101-416 52-341 (376)
199 2xdw_A Prolyl endopeptidase; a 99.5 1.3E-11 4.5E-16 122.0 28.7 207 192-414 122-370 (710)
200 3q7m_A Lipoprotein YFGL, BAMB; 99.5 5.9E-11 2E-15 107.9 30.3 266 98-409 99-375 (376)
201 2bkl_A Prolyl endopeptidase; m 99.5 1.7E-12 5.9E-17 127.9 21.4 243 90-360 118-399 (695)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5E-11 1.7E-15 105.4 28.9 241 133-413 18-300 (314)
203 2z2n_A Virginiamycin B lyase; 99.5 3.5E-10 1.2E-14 99.1 33.7 238 129-411 11-254 (299)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.9E-11 2.4E-15 104.5 28.6 243 92-359 17-300 (314)
205 1qks_A Cytochrome CD1 nitrite 99.5 1.5E-09 5.3E-14 103.1 38.8 311 81-418 186-544 (567)
206 3g4e_A Regucalcin; six bladed 99.5 3E-10 1E-14 99.5 30.2 219 130-383 10-252 (297)
207 1xip_A Nucleoporin NUP159; bet 99.4 3.6E-12 1.2E-16 114.1 17.4 171 94-301 39-231 (388)
208 1yr2_A Prolyl oligopeptidase; 99.4 5.7E-11 1.9E-15 117.9 24.1 241 91-359 161-442 (741)
209 3hrp_A Uncharacterized protein 99.4 1.2E-09 4.2E-14 100.0 30.6 239 93-356 131-408 (409)
210 3hrp_A Uncharacterized protein 99.4 3.4E-10 1.2E-14 103.7 26.4 235 134-411 132-409 (409)
211 1xip_A Nucleoporin NUP159; bet 99.4 1.9E-11 6.6E-16 109.5 16.9 163 196-383 39-224 (388)
212 3g4e_A Regucalcin; six bladed 99.4 1.8E-09 6.1E-14 94.6 29.1 223 91-339 11-250 (297)
213 2qe8_A Uncharacterized protein 99.4 9.5E-11 3.2E-15 105.0 21.1 269 93-409 17-318 (343)
214 2qc5_A Streptogramin B lactona 99.4 7.8E-09 2.7E-13 90.4 33.2 237 130-411 17-259 (300)
215 1yiq_A Quinohemoprotein alcoho 99.4 4.8E-10 1.6E-14 109.6 27.4 281 101-416 69-509 (689)
216 1mda_H Methylamine dehydrogena 99.4 1.1E-10 3.8E-15 104.3 20.9 264 113-419 47-353 (368)
217 1kb0_A Quinohemoprotein alcoho 99.3 4.5E-10 1.6E-14 109.6 25.9 282 101-417 76-512 (677)
218 3hxj_A Pyrrolo-quinoline quino 99.3 8.7E-11 3E-15 104.6 18.1 267 91-414 58-326 (330)
219 2ghs_A AGR_C_1268P; regucalcin 99.3 4.7E-09 1.6E-13 93.2 28.8 212 135-383 51-282 (326)
220 1kb0_A Quinohemoprotein alcoho 99.3 3E-09 1E-13 103.8 28.4 298 98-412 124-567 (677)
221 1yiq_A Quinohemoprotein alcoho 99.3 5.2E-09 1.8E-13 102.3 28.8 278 98-383 117-528 (689)
222 3dr2_A Exported gluconolactona 99.2 2.7E-09 9.3E-14 93.8 23.5 227 127-404 39-299 (305)
223 3dr2_A Exported gluconolactona 99.2 5.4E-09 1.9E-13 91.9 25.0 229 88-350 40-299 (305)
224 2ghs_A AGR_C_1268P; regucalcin 99.2 2.7E-08 9.2E-13 88.3 29.1 215 95-338 51-279 (326)
225 2mad_H Methylamine dehydrogena 99.2 7.9E-08 2.7E-12 86.7 32.1 245 81-367 56-356 (373)
226 3iuj_A Prolyl endopeptidase; h 99.2 2E-09 7E-14 105.8 23.2 240 130-414 126-407 (693)
227 3sjl_D Methylamine dehydrogena 99.2 5.2E-09 1.8E-13 93.4 23.0 267 80-383 67-384 (386)
228 3hxj_A Pyrrolo-quinoline quino 99.2 6.7E-10 2.3E-14 98.9 15.6 258 98-414 25-285 (330)
229 3iuj_A Prolyl endopeptidase; h 99.1 5.6E-09 1.9E-13 102.7 22.0 203 192-413 126-360 (693)
230 2hz6_A Endoplasmic reticulum t 99.1 3.3E-11 1.1E-15 109.0 4.9 187 140-369 7-200 (369)
231 1kv9_A Type II quinohemoprotei 99.1 2.9E-08 9.9E-13 96.8 25.7 194 101-317 65-336 (668)
232 2hz6_A Endoplasmic reticulum t 99.1 2.5E-11 8.6E-16 109.7 1.7 186 205-416 8-196 (369)
233 2ece_A 462AA long hypothetical 99.1 9.8E-08 3.4E-12 85.9 24.7 189 102-313 95-351 (462)
234 1npe_A Nidogen, entactin; glyc 99.1 9.5E-07 3.2E-11 75.8 30.0 244 103-383 2-261 (267)
235 4a2l_A BT_4663, two-component 99.0 2E-06 6.8E-11 86.1 35.6 290 92-414 214-528 (795)
236 3nol_A Glutamine cyclotransfer 99.0 2.3E-07 7.9E-12 77.3 23.8 196 79-303 28-244 (262)
237 2iwa_A Glutamine cyclotransfer 99.0 4.6E-07 1.6E-11 76.5 25.8 204 80-315 7-238 (266)
238 3c75_H MADH, methylamine dehyd 99.0 1E-07 3.5E-12 86.6 23.3 249 80-368 107-409 (426)
239 3nok_A Glutaminyl cyclase; bet 99.0 2.4E-07 8.2E-12 77.2 22.9 193 80-302 41-253 (268)
240 2ad6_A Methanol dehydrogenase 98.9 1.3E-06 4.4E-11 83.4 29.0 262 98-370 111-503 (571)
241 1kv9_A Type II quinohemoprotei 98.9 9.3E-07 3.2E-11 86.2 28.0 265 99-371 114-498 (668)
242 4a2l_A BT_4663, two-component 98.9 9.9E-06 3.4E-10 81.0 35.8 282 93-413 310-615 (795)
243 2ad6_A Methanol dehydrogenase 98.9 1.3E-06 4.6E-11 83.3 26.7 115 101-234 61-194 (571)
244 2iwa_A Glutamine cyclotransfer 98.9 1E-06 3.6E-11 74.3 22.7 200 196-414 22-239 (266)
245 1w6s_A Methanol dehydrogenase 98.9 6E-06 2E-10 78.9 30.6 257 105-370 124-512 (599)
246 2ece_A 462AA long hypothetical 98.9 2.8E-06 9.7E-11 76.5 26.3 188 197-400 140-399 (462)
247 1fwx_A Nitrous oxide reductase 98.9 2.2E-07 7.4E-12 86.7 19.2 240 144-414 103-433 (595)
248 3v9f_A Two-component system se 98.8 2.2E-05 7.5E-10 78.4 34.8 293 93-413 211-525 (781)
249 3mbr_X Glutamine cyclotransfer 98.8 4.7E-06 1.6E-10 68.9 24.4 195 80-303 7-223 (243)
250 1mda_H Methylamine dehydrogena 98.8 4.4E-07 1.5E-11 81.1 19.2 255 79-381 53-365 (368)
251 2qe8_A Uncharacterized protein 98.8 4.7E-07 1.6E-11 80.9 19.3 214 91-309 65-316 (343)
252 1w6s_A Methanol dehydrogenase 98.8 2.3E-06 7.9E-11 81.7 24.9 194 101-318 61-346 (599)
253 1flg_A Protein (quinoprotein e 98.8 7.9E-06 2.7E-10 78.1 28.1 276 99-383 114-539 (582)
254 3v9f_A Two-component system se 98.8 3.9E-05 1.3E-09 76.5 34.1 287 92-414 257-570 (781)
255 3nol_A Glutamine cyclotransfer 98.7 3.7E-06 1.3E-10 70.1 21.3 175 197-384 45-236 (262)
256 1flg_A Protein (quinoprotein e 98.7 1.4E-05 4.8E-10 76.4 28.0 118 101-233 67-201 (582)
257 1fwx_A Nitrous oxide reductase 98.7 1.2E-06 4.3E-11 81.6 19.8 249 96-370 90-442 (595)
258 2fp8_A Strictosidine synthase; 98.7 3.3E-05 1.1E-09 68.1 27.1 239 95-359 21-314 (322)
259 2xbg_A YCF48-like protein; pho 98.6 0.00021 7.1E-09 63.1 33.8 285 80-410 25-320 (327)
260 3nok_A Glutaminyl cyclase; bet 98.6 1.1E-05 3.8E-10 67.3 20.7 183 196-400 56-254 (268)
261 3mbr_X Glutamine cyclotransfer 98.6 3.7E-05 1.3E-09 63.6 23.7 186 195-401 21-224 (243)
262 1npe_A Nidogen, entactin; glyc 98.6 0.00015 5.2E-09 61.9 28.9 193 93-316 36-240 (267)
263 2fp8_A Strictosidine synthase; 98.6 3.4E-05 1.1E-09 68.1 24.1 249 135-414 21-315 (322)
264 1k3i_A Galactose oxidase precu 98.6 4.1E-05 1.4E-09 74.7 26.7 266 101-401 197-530 (656)
265 3v64_C Agrin; beta propeller, 98.5 0.00051 1.7E-08 61.2 30.3 235 92-360 33-277 (349)
266 3tc9_A Hypothetical hydrolase; 98.5 0.00013 4.5E-09 67.0 26.3 149 135-313 139-300 (430)
267 2p4o_A Hypothetical protein; p 98.5 0.00054 1.9E-08 59.8 29.7 227 122-383 22-268 (306)
268 3qqz_A Putative uncharacterize 98.4 0.00043 1.5E-08 58.0 25.9 205 192-409 24-250 (255)
269 3v65_B Low-density lipoprotein 98.4 0.00052 1.8E-08 62.0 28.5 232 95-360 79-320 (386)
270 2p4o_A Hypothetical protein; p 98.4 0.00069 2.4E-08 59.1 28.9 204 80-313 20-241 (306)
271 3v65_B Low-density lipoprotein 98.4 0.00067 2.3E-08 61.3 28.2 200 193-415 114-321 (386)
272 1ijq_A LDL receptor, low-densi 98.4 0.0011 3.7E-08 58.1 32.4 202 193-415 28-241 (316)
273 1ijq_A LDL receptor, low-densi 98.4 0.0011 3.9E-08 58.0 31.9 226 104-360 3-240 (316)
274 3v64_C Agrin; beta propeller, 98.3 0.0015 5E-08 58.2 30.0 199 194-415 72-278 (349)
275 3p5b_L Low density lipoprotein 98.3 0.0018 6.1E-08 58.8 32.7 230 103-360 84-322 (400)
276 2xe4_A Oligopeptidase B; hydro 98.3 0.00014 4.8E-09 72.0 22.8 196 196-410 175-396 (751)
277 2xbg_A YCF48-like protein; pho 98.3 0.0017 6E-08 57.1 28.3 234 92-356 79-320 (327)
278 4hw6_A Hypothetical protein, I 98.3 0.00091 3.1E-08 61.4 26.2 235 135-411 141-432 (433)
279 3sov_A LRP-6, low-density lipo 98.3 0.0019 6.6E-08 56.5 27.6 218 111-360 12-240 (318)
280 3qqz_A Putative uncharacterize 98.3 0.0014 4.9E-08 54.9 27.7 204 88-311 22-250 (255)
281 3amr_A 3-phytase; beta-propell 98.2 0.00078 2.7E-08 58.7 23.6 192 102-313 40-262 (355)
282 3p5b_L Low density lipoprotein 98.2 0.0038 1.3E-07 56.6 32.4 203 193-416 110-324 (400)
283 3m0c_C LDL receptor, low-densi 98.1 0.009 3.1E-07 59.0 31.2 237 96-360 388-634 (791)
284 1k3i_A Galactose oxidase precu 98.1 0.00029 1E-08 68.7 20.6 205 195-414 243-499 (656)
285 3m0c_C LDL receptor, low-densi 98.1 0.011 3.8E-07 58.4 30.6 203 193-416 422-636 (791)
286 2p9w_A MAL S 1 allergenic prot 98.1 0.0046 1.6E-07 53.4 25.5 208 132-358 12-265 (334)
287 3ii7_A Kelch-like protein 7; p 98.0 0.0039 1.3E-07 54.2 24.7 154 205-369 101-282 (306)
288 2vpj_A Kelch-like protein 12; 98.0 0.0029 1E-07 54.8 23.8 151 205-366 112-285 (301)
289 2xe4_A Oligopeptidase B; hydro 98.0 0.0014 4.7E-08 65.0 23.8 193 134-356 175-398 (751)
290 2vpj_A Kelch-like protein 12; 98.0 0.0037 1.3E-07 54.2 23.7 206 205-432 62-300 (301)
291 2xzh_A Clathrin heavy chain 1; 98.0 0.006 2.1E-07 52.3 24.7 208 200-429 72-305 (365)
292 4hw6_A Hypothetical protein, I 98.0 0.0089 3E-07 54.8 26.7 195 95-312 141-372 (433)
293 3ei3_A DNA damage-binding prot 98.0 0.023 8E-07 58.6 35.2 278 92-415 553-916 (1158)
294 3tc9_A Hypothetical hydrolase; 97.9 0.013 4.5E-07 53.6 27.6 148 95-265 139-300 (430)
295 3sov_A LRP-6, low-density lipo 97.9 0.011 3.6E-07 51.7 26.0 199 195-416 35-242 (318)
296 1n7d_A LDL receptor, low-densi 97.8 0.00012 4.1E-09 71.6 12.4 238 111-381 385-634 (699)
297 2xzh_A Clathrin heavy chain 1; 97.8 0.011 3.8E-07 50.7 30.1 261 110-417 47-337 (365)
298 3ii7_A Kelch-like protein 7; p 97.8 0.0052 1.8E-07 53.4 21.0 188 205-414 55-274 (306)
299 2xn4_A Kelch-like protein 2; s 97.8 0.0055 1.9E-07 53.1 20.9 145 205-359 108-277 (302)
300 2xn4_A Kelch-like protein 2; s 97.8 0.0085 2.9E-07 51.9 22.1 206 205-431 61-298 (302)
301 1zgk_A Kelch-like ECH-associat 97.8 0.0072 2.5E-07 52.6 21.5 145 205-359 121-288 (308)
302 3kya_A Putative phosphatase; s 97.8 0.025 8.5E-07 52.2 25.6 248 135-416 141-479 (496)
303 2p9w_A MAL S 1 allergenic prot 97.7 0.014 4.8E-07 50.4 21.0 161 94-265 14-214 (334)
304 1n7d_A LDL receptor, low-densi 97.6 0.00062 2.1E-08 66.6 13.8 200 195-415 406-617 (699)
305 2uvk_A YJHT; unknown function, 97.6 0.0048 1.7E-07 55.0 18.8 141 216-360 168-344 (357)
306 4asc_A Kelch repeat and BTB do 97.6 0.022 7.4E-07 49.7 22.1 189 204-414 44-279 (315)
307 2ism_A Putative oxidoreductase 97.5 0.048 1.6E-06 48.4 24.8 235 134-400 32-333 (352)
308 1zgk_A Kelch-like ECH-associat 97.5 0.03 1E-06 48.6 21.0 188 205-414 70-289 (308)
309 4a0p_A LRP6, LRP-6, low-densit 97.5 0.087 3E-06 50.7 30.2 221 149-415 12-240 (628)
310 4a0p_A LRP6, LRP-6, low-densit 97.5 0.089 3E-06 50.6 31.6 222 104-360 8-239 (628)
311 1bpo_A Protein (clathrin); cla 97.4 0.06 2E-06 48.2 28.5 210 199-430 70-305 (494)
312 1bpo_A Protein (clathrin); cla 97.4 0.07 2.4E-06 47.8 32.7 260 110-416 46-335 (494)
313 3amr_A 3-phytase; beta-propell 97.4 0.06 2.1E-06 47.0 25.9 196 144-368 42-271 (355)
314 3s94_A LRP-6, low-density lipo 97.3 0.13 4.5E-06 49.4 26.8 219 111-360 17-245 (619)
315 2woz_A Kelch repeat and BTB do 97.3 0.073 2.5E-06 46.3 22.0 192 203-415 54-290 (318)
316 3pbp_A Nucleoporin NUP82; beta 97.3 0.036 1.2E-06 49.5 18.6 152 202-354 28-208 (452)
317 3ott_A Two-component system se 97.2 0.19 6.6E-06 49.7 31.4 279 94-414 104-403 (758)
318 3pbp_A Nucleoporin NUP82; beta 97.2 0.015 5E-07 52.0 15.6 113 196-310 67-208 (452)
319 2uvk_A YJHT; unknown function, 97.2 0.11 3.8E-06 46.0 24.1 144 257-417 168-347 (357)
320 3ei3_A DNA damage-binding prot 97.2 0.29 1E-05 50.6 37.0 177 216-413 807-1000(1158)
321 4asc_A Kelch repeat and BTB do 97.1 0.089 3E-06 45.7 20.3 146 205-359 98-278 (315)
322 1xi4_A Clathrin heavy chain; a 97.0 0.11 3.9E-06 53.7 21.5 260 110-416 46-335 (1630)
323 3a9g_A Putative uncharacterize 97.0 0.18 6.2E-06 44.6 26.2 237 133-400 29-330 (354)
324 2woz_A Kelch repeat and BTB do 96.9 0.18 6E-06 43.9 20.8 145 205-359 109-288 (318)
325 1tl2_A L10, protein (tachylect 96.9 0.028 9.6E-07 45.3 13.1 153 134-307 42-203 (236)
326 2be1_A Serine/threonine-protei 96.9 0.029 1E-06 49.0 14.2 115 102-234 10-139 (339)
327 3ott_A Two-component system se 96.7 0.54 1.9E-05 46.5 35.1 231 93-355 63-304 (758)
328 2g8s_A Glucose/sorbosone dehyd 96.6 0.35 1.2E-05 42.8 24.5 247 134-410 19-350 (353)
329 3kya_A Putative phosphatase; s 96.6 0.48 1.6E-05 43.8 29.7 246 95-359 141-476 (496)
330 1xi4_A Clathrin heavy chain; a 96.3 0.42 1.4E-05 49.7 20.0 206 201-430 72-305 (1630)
331 3s94_A LRP-6, low-density lipo 96.2 0.96 3.3E-05 43.4 35.7 151 93-265 40-201 (619)
332 2zwa_A Leucine carboxyl methyl 96.1 1 3.5E-05 43.9 21.6 195 204-415 396-638 (695)
333 2ism_A Putative oxidoreductase 95.8 0.88 3E-05 40.1 22.7 104 195-301 31-152 (352)
334 3sre_A PON1, serum paraoxonase 95.8 0.93 3.2E-05 39.9 22.7 189 195-402 50-287 (355)
335 2be1_A Serine/threonine-protei 95.7 0.044 1.5E-06 47.9 8.8 146 206-355 10-181 (339)
336 3qhy_B Beta-lactamase inhibito 95.6 0.93 3.2E-05 38.5 21.0 223 94-359 25-247 (282)
337 1tl2_A L10, protein (tachylect 95.5 0.069 2.4E-06 43.1 8.3 108 195-308 41-157 (236)
338 3sre_A PON1, serum paraoxonase 95.3 1.4 4.8E-05 38.7 29.1 178 110-311 81-295 (355)
339 3qhy_B Beta-lactamase inhibito 95.2 1.3 4.4E-05 37.6 22.6 225 134-415 25-249 (282)
340 3a9g_A Putative uncharacterize 94.0 2.9 0.0001 36.8 27.9 205 92-314 28-296 (354)
341 2zwa_A Leucine carboxyl methyl 94.0 2.2 7.4E-05 41.7 16.5 150 205-359 451-636 (695)
342 4gq2_M Nucleoporin NUP120; bet 93.8 2.3 8E-05 43.1 16.9 100 134-233 173-274 (950)
343 3das_A Putative oxidoreductase 93.7 3.3 0.00011 36.2 29.7 154 85-254 24-219 (347)
344 1cru_A Protein (soluble quinop 92.4 4 0.00014 37.4 14.8 109 194-302 26-162 (454)
345 3das_A Putative oxidoreductase 92.2 5.6 0.00019 34.8 28.4 242 132-400 31-326 (347)
346 3kci_A Probable E3 ubiquitin-p 92.1 6.2 0.00021 35.2 33.2 257 134-412 54-345 (389)
347 3mvd_K Regulator of chromosome 89.6 11 0.00039 33.9 31.7 254 134-412 76-374 (423)
348 3sbq_A Nitrous-oxide reductase 88.4 9.9 0.00034 35.5 13.1 142 238-381 324-500 (638)
349 1zi0_A DNA gyrase subunit A; b 88.3 11 0.00039 32.2 28.1 244 102-358 3-277 (307)
350 1cru_A Protein (soluble quinop 87.7 16 0.00056 33.3 30.7 106 133-254 27-162 (454)
351 3no0_A DNA gyrase subunit A; D 86.4 14 0.00047 31.1 20.2 201 93-313 24-245 (276)
352 4fhn_B Nucleoporin NUP120; pro 86.3 2.4 8.2E-05 44.1 9.2 39 195-233 238-276 (1139)
353 3b7f_A Glycosyl hydrolase, BNR 84.9 20 0.0007 31.7 27.9 193 102-311 22-259 (394)
354 2wg3_C Hedgehog-interacting pr 84.6 24 0.00082 32.3 15.3 109 195-303 14-158 (463)
355 3uc1_A DNA gyrase subunit A; D 83.6 21 0.00072 30.8 26.1 163 194-358 94-279 (327)
356 4gq2_M Nucleoporin NUP120; bet 83.1 35 0.0012 34.6 15.7 38 134-171 237-276 (950)
357 2g8s_A Glucose/sorbosone dehyd 83.0 23 0.0008 30.9 27.3 50 93-143 18-76 (353)
358 3kci_A Probable E3 ubiquitin-p 81.0 29 0.001 30.7 29.2 251 94-358 54-345 (389)
359 4d9s_A UVB-resistance protein 80.1 33 0.0011 30.7 39.3 293 92-412 15-357 (406)
360 3mvd_K Regulator of chromosome 80.0 33 0.0011 30.8 32.9 249 93-358 75-374 (423)
361 3b7f_A Glycosyl hydrolase, BNR 78.8 35 0.0012 30.2 22.7 112 194-310 54-204 (394)
362 3sbq_A Nitrous-oxide reductase 78.5 21 0.00072 33.4 10.9 107 195-302 323-453 (638)
363 3q6k_A 43.2 kDa salivary prote 78.1 36 0.0012 30.1 18.0 146 153-314 124-306 (381)
364 3q6k_A 43.2 kDa salivary prote 76.4 40 0.0014 29.8 21.3 181 113-299 124-339 (381)
365 3f7f_A Nucleoporin NUP120; nuc 75.6 9.2 0.00031 36.9 8.1 95 134-234 163-259 (729)
366 3f7f_A Nucleoporin NUP120; nuc 74.4 5.2 0.00018 38.6 6.1 37 93-129 222-258 (729)
367 1suu_A DNA gyrase subunit A; t 74.2 41 0.0014 28.8 29.3 201 101-314 7-231 (312)
368 3s25_A Hypothetical 7-bladed b 72.7 44 0.0015 28.4 22.7 99 200-313 150-254 (302)
369 3no0_A DNA gyrase subunit A; D 69.8 48 0.0016 27.7 22.7 205 195-412 24-246 (276)
370 4d9s_A UVB-resistance protein 63.9 80 0.0027 28.1 32.6 251 93-358 68-357 (406)
371 1wp5_A Topoisomerase IV; broke 63.6 71 0.0024 27.4 27.1 242 101-358 4-277 (323)
372 3of7_A Regulator of chromosome 63.1 91 0.0031 28.5 29.6 254 93-358 67-405 (473)
373 1a12_A RCC1, regulator of chro 60.9 91 0.0031 27.7 29.5 249 92-358 58-365 (413)
374 3uc1_A DNA gyrase subunit A; D 56.0 98 0.0034 26.6 24.3 209 193-412 40-279 (327)
375 2wg3_C Hedgehog-interacting pr 55.3 1.2E+02 0.0042 27.5 15.2 30 284-313 14-44 (463)
376 4fhn_B Nucleoporin NUP120; pro 53.4 35 0.0012 35.4 8.1 24 393-416 249-272 (1139)
377 3of7_A Regulator of chromosome 52.2 1.4E+02 0.0047 27.2 27.7 219 132-358 66-341 (473)
378 1suu_A DNA gyrase subunit A; t 46.0 1.4E+02 0.0047 25.4 28.1 198 144-358 10-231 (312)
379 3s25_A Hypothetical 7-bladed b 42.9 1.5E+02 0.0052 25.0 28.2 137 201-359 110-256 (302)
380 3al9_A Plexin-A2; beta-propell 41.5 89 0.0031 29.2 8.1 71 238-309 401-476 (539)
381 1a12_A RCC1, regulator of chro 39.6 2E+02 0.0069 25.4 33.9 251 133-412 59-365 (413)
382 1zvt_A Topoisomerase IV subuni 37.9 1.7E+02 0.0057 24.0 14.4 150 208-358 4-163 (256)
383 3l6v_A GYRA, DNA gyrase subuni 36.9 2.2E+02 0.0074 25.0 29.8 240 101-357 6-315 (370)
384 3mez_B Mannose-specific lectin 36.5 1.1E+02 0.0036 21.3 9.9 57 206-263 24-81 (113)
385 3zwu_A Alkaline phosphatase PH 32.5 1.5E+02 0.005 28.1 8.0 53 196-248 477-542 (592)
386 1zi0_A DNA gyrase subunit A; b 31.6 2.4E+02 0.0081 23.9 26.5 206 195-412 42-277 (307)
387 1q47_A Semaphorin 3A; beta pro 31.1 2.5E+02 0.0084 25.9 9.2 72 238-309 405-487 (495)
388 1zvt_A Topoisomerase IV subuni 30.6 2.2E+02 0.0076 23.3 14.9 117 195-313 33-162 (256)
389 4a9v_A PHOX; hydrolase, beta-p 30.2 2.4E+02 0.0082 26.6 8.8 58 195-252 476-547 (592)
390 1wp5_A Topoisomerase IV; broke 30.0 2.6E+02 0.0089 23.9 27.9 208 194-412 38-277 (323)
391 1sqj_A OXG-RCBH, oligoxylogluc 25.5 4.9E+02 0.017 25.6 21.7 112 193-307 13-145 (789)
392 2cn3_A Xyloglucanase, beta-1,4 23.4 5.2E+02 0.018 25.1 13.4 165 237-413 23-230 (737)
393 4gz8_A Semaphorin-3A; multi-do 23.1 2.5E+02 0.0086 27.0 7.8 29 192-220 467-495 (667)
394 4a9v_A PHOX; hydrolase, beta-p 22.1 3.5E+02 0.012 25.5 8.3 59 238-302 477-549 (592)
395 3ol2_B Plexin-B1; beta-propell 21.8 2.7E+02 0.0093 25.8 7.6 69 239-309 389-461 (528)
396 3l6v_A GYRA, DNA gyrase subuni 20.7 4.3E+02 0.015 23.1 28.6 155 143-313 8-179 (370)
397 1olz_A Semaphorin 4D; developm 20.4 3.1E+02 0.01 26.4 7.9 28 193-220 448-477 (663)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.1e-48 Score=356.01 Aligned_cols=283 Identities=22% Similarity=0.326 Sum_probs=254.2
Q ss_pred eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecC
Q 046226 85 ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRST 160 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~ 160 (434)
...+.+|.++|++++| ++++|++|+.||+|+|||+.+++....+.+|...|.+++|+|+ .|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4568899999999999 7899999999999999999999999999999999999999987 89999999999999997
Q ss_pred CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeE
Q 046226 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 240 (434)
..+.+..+ .+|...|.+++|+|++++|++|+.|++|++||+++++++..+.+|...|.
T Consensus 181 ~~~~~~~~----------------------~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~ 238 (410)
T 1vyh_C 181 GFECIRTM----------------------HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238 (410)
T ss_dssp SSCEEECC----------------------CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCceeEEE----------------------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEE
Confidence 66544433 26999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC--------------------CCEEE
Q 046226 241 ALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD--------------------DGLLY 299 (434)
Q Consensus 241 ~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~ 299 (434)
++.+++++ ++++|+.|+.|++||+. .......+..|...|.+++|+|+ +.+|+
T Consensus 239 ~~~~~~~g~~l~s~s~D~~v~vwd~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSNDQTVRVWVVA------TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETT------TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECC------CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE
Confidence 99999999 99999999999999987 23345567789999999999996 67899
Q ss_pred EEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeE
Q 046226 300 GGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377 (434)
Q Consensus 300 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 377 (434)
+|+.|+.|++||++.... ...+.+|...|.++.|+ +++|++|+.||.|++||+.++ .++..+.+|...|++
T Consensus 313 sgs~D~~i~iwd~~~~~~----~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---~~~~~~~~h~~~v~~ 385 (410)
T 1vyh_C 313 SGSRDKTIKMWDVSTGMC----LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---RCMKTLNAHEHFVTS 385 (410)
T ss_dssp EEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---CCCEEEECCSSCEEE
T ss_pred EEeCCCeEEEEECCCCce----EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---ceEEEEcCCCCcEEE
Confidence 999999999999875433 23556899999999986 679999999999999999887 677888999999999
Q ss_pred EEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
++|+|+ +.+|++|+.||+|++|+++
T Consensus 386 l~~~~~---------~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 386 LDFHKT---------APYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECSS---------SSCEEEEETTSEEEEEC--
T ss_pred EEEcCC---------CCEEEEEeCCCcEEEEeCC
Confidence 999999 8899999999999999863
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-46 Score=338.59 Aligned_cols=289 Identities=17% Similarity=0.269 Sum_probs=252.0
Q ss_pred eeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEe
Q 046226 82 YRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVW 157 (434)
Q Consensus 82 ~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vw 157 (434)
.++..++.+|.+.|++++| ++++|++|+.||+|+|||+.+++.+..+..|...|.+++|+|+ .+++++.|+.|++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 4567889999999999999 8999999999999999999999999999999999999999997 89999999999999
Q ss_pred ecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCcc
Q 046226 158 RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE 237 (434)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (434)
++.......... . .+.+|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|..
T Consensus 125 ~~~~~~~~~~~~-----------~-------~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 125 NLKTREGNVRVS-----------R-------ELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp ETTTCSBSCEEE-----------E-------EEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred ECccCCCcceeE-----------E-------EecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCC
Confidence 987653221110 0 1236999999999998765 88999999999999999999999999999
Q ss_pred CeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccc
Q 046226 238 PINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 238 ~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
.|.+++|+|++ ++++|+.|+.|++||++ .......+.+|...|.+++|+|++++|++|+.||.|++||++...
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVR------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT------TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECC------CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999 99999999999999987 234556678899999999999999999999999999999997654
Q ss_pred ccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCccc
Q 046226 317 AQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYC 394 (434)
Q Consensus 317 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 394 (434)
....+ ....+...|.+++|+ +++|++|+.||.|++||+.++ ..+..+.+|.+.|.+++|+|+ +.
T Consensus 260 ~~~~~--~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---~~~~~~~~h~~~v~~~~~s~d---------g~ 325 (340)
T 1got_B 260 ELMTY--SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---DRAGVLAGHDNRVSCLGVTDD---------GM 325 (340)
T ss_dssp EEEEE--CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECTT---------SS
T ss_pred EEEEE--ccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---cEeeEeecCCCcEEEEEEcCC---------CC
Confidence 33322 122344578888886 679999999999999999887 677889999999999999999 89
Q ss_pred EEEEeecCCeEEEEe
Q 046226 395 TICTGSLDGVLKMWR 409 (434)
Q Consensus 395 ~l~s~~~Dg~v~iw~ 409 (434)
+|+||+.||.|+|||
T Consensus 326 ~l~s~s~D~~i~iWd 340 (340)
T 1got_B 326 AVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEcCCccEEecC
Confidence 999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.8e-47 Score=337.86 Aligned_cols=286 Identities=19% Similarity=0.272 Sum_probs=253.3
Q ss_pred eeeeEEEeeccccEEEEEE------cCCEEEEEeCCCeEEEecCCCcee--EeeccCCCccEEEEEEeCC--EEEEEEcC
Q 046226 82 YRCISSVLKKDGQILCIAV------GNGFIYTGSDSNVIRIWKQPEFTE--CGRLKAKTSMVVAMEVSHD--RVYAAYGD 151 (434)
Q Consensus 82 ~~~~~~~~~h~~~v~~~~~------~~~~l~tg~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~--~l~~~s~d 151 (434)
......+.+|.+.|++++| ++++|++|+.|++|+|||+.+.+. ...+.+|...|.+++|+++ .+++++.|
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 4445667889999999999 256999999999999999877653 4568899999999999997 89999999
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 231 (434)
+.|++||+.+++.+..+. .|...+.+++|+|++++|++|+.||.|++||+++++....
T Consensus 102 ~~i~lWd~~~~~~~~~~~----------------------~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSID----------------------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp SEEEEEETTTTEEEEEEE----------------------CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE
T ss_pred CcEEEEECCCCCEEEEEe----------------------CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE
Confidence 999999998776554442 4778899999999999999999999999999999999999
Q ss_pred cccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEE
Q 046226 232 IQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYW 310 (434)
Q Consensus 232 ~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 310 (434)
+..|...|.+++|+|++ +|++++.||.|++||++ .......+.+|..+|.+++|+|++++|++|+.||.|++|
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~------~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA------TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 233 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT------TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC------CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEE
Confidence 99999999999999999 99999999999999987 334566778899999999999999999999999999999
Q ss_pred EcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCC
Q 046226 311 HKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 311 d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 388 (434)
|++.... ...+.+|...|.+++|+ +.+|++++.|+.|++||+.++ .++..+.+|.+.|.+++|+|+
T Consensus 234 d~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~h~~~v~~v~~s~~----- 301 (321)
T 3ow8_A 234 DVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---TCVHTFFDHQDQVWGVKYNGN----- 301 (321)
T ss_dssp ETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTT-----
T ss_pred ECCCcce----eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---EEEEEEcCCCCcEEEEEECCC-----
Confidence 9875432 34567899999999996 669999999999999999987 888999999999999999998
Q ss_pred CCCcccEEEEeecCCeEEEEecC
Q 046226 389 TEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 389 ~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
+.+|++++.||.|++||+.
T Consensus 302 ----g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 302 ----GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ----SSEEEEEETTCCEEEEECC
T ss_pred ----CCEEEEEeCCCeEEEEeCC
Confidence 8999999999999999964
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-45 Score=334.04 Aligned_cols=291 Identities=16% Similarity=0.263 Sum_probs=250.0
Q ss_pred eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEee
Q 046226 83 RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWR 158 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd 158 (434)
+...++.+|.+.|+|++| ++++|++|+.||+|+|||..+++....+..|...|.+++|+|+ .+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 567889999999999999 8999999999999999999999999999999999999999997 899999999999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccC
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP 238 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (434)
+......... .... .+..|...|.+++|+|++..|++++.|++|++||+++++++..+.+|...
T Consensus 135 ~~~~~~~~~~---------~~~~-------~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~ 198 (354)
T 2pbi_B 135 LTFDKNENMA---------AKKK-------SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGAD 198 (354)
T ss_dssp CCCCTTCCSG---------GGCE-------EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred Eecccccccc---------ccce-------eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC
Confidence 8654221100 0011 11259999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcC--CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcc
Q 046226 239 INALVVAD--DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWF 315 (434)
Q Consensus 239 v~~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 315 (434)
|.+++++| ++ .|++|+.||.|++||++ .......+..|...|.+++|+|++.+|++|+.|+.|++||++..
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMR------SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETT------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECC------CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999987 44 99999999999999988 23455667889999999999999999999999999999999765
Q ss_pred cccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcc
Q 046226 316 SAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 316 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 393 (434)
.....+ ....+...+.+++|+ +.+|++|+.|+.|++||+.++ ..+..+.+|.+.|++++|+|+ +
T Consensus 273 ~~~~~~--~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---~~~~~l~~h~~~v~~l~~spd---------g 338 (354)
T 2pbi_B 273 REVAIY--SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG---SRVSILFGHENRVSTLRVSPD---------G 338 (354)
T ss_dssp EEEEEE--CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---SEEEEECCCSSCEEEEEECTT---------S
T ss_pred cEEEEE--cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC---ceEEEEECCCCcEEEEEECCC---------C
Confidence 433222 112333467777775 779999999999999999887 677888999999999999999 8
Q ss_pred cEEEEeecCCeEEEEe
Q 046226 394 CTICTGSLDGVLKMWR 409 (434)
Q Consensus 394 ~~l~s~~~Dg~v~iw~ 409 (434)
.+|++|+.||+|++|+
T Consensus 339 ~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 339 TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SCEEEEETTSEEEEEC
T ss_pred CEEEEEcCCCCEEecC
Confidence 9999999999999996
No 5
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-45 Score=329.00 Aligned_cols=305 Identities=19% Similarity=0.242 Sum_probs=236.1
Q ss_pred cceeeeEEEeeccccEEEEEEcCCEEEEEeCCCeEEEecCCCc--eeEeec-cC-CCccEEEEEEeCC--EEEEEEcCCe
Q 046226 80 SSYRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEF--TECGRL-KA-KTSMVVAMEVSHD--RVYAAYGDGK 153 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~--~~~~~~-~~-~~~~v~~l~~~~~--~l~~~s~dg~ 153 (434)
...+++.++.+|.+.|++++|..++|++|+.|++|++||+.++ +....+ .. |...|.+++|+|+ .|++++.|+.
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 3567889999999999999996669999999999999999874 445555 44 9999999999997 8999999999
Q ss_pred EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC----CeeE
Q 046226 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD----SKCI 229 (434)
Q Consensus 154 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~ 229 (434)
|++||+........ ...... .+.+|...|.+++|+|++++|++|+.|++|++||+.. .+++
T Consensus 82 v~iw~~~~~~~~~~--------~~~~~~-------~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~ 146 (330)
T 2hes_X 82 VSIWAKEESADRTF--------EMDLLA-------IIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECI 146 (330)
T ss_dssp EEEEEC-------C--------CCEEEE-------EEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred EEEEEcccCcCccc--------cceeEE-------EEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEE
Confidence 99999854211000 000001 1237999999999999999999999999999999943 3567
Q ss_pred EEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC--CCEEEEEcCCCe
Q 046226 230 ETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD--DGLLYGGCTDGY 306 (434)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~ 306 (434)
..+.+|...|.+++|+|++ +|++++.|+.|++||+.. ........+.+|...|.+++|+|+ +.+|++|+.|+.
T Consensus 147 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 147 SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD----DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET----TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC----CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 8889999999999999999 999999999999999761 123456678899999999999998 678999999999
Q ss_pred EEEEEcCccccc----ccccCcccC-cccceEEEEee-CCEEEEecCCCcEEEEeccCCCceeeEEEeecccc-ceeEEE
Q 046226 307 IHYWHKGWFSAQ----LQYGGALQG-HTHAVMCLASV-ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG-PIRCAI 379 (434)
Q Consensus 307 i~i~d~~~~~~~----~~~~~~~~~-~~~~v~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~ 379 (434)
|++||++..... ......+.+ |...|.+++|+ +.+|++++.||.|++||..++........+.+|.. .|.+++
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVK 302 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEE
Confidence 999998643211 112223333 88899999997 45899999999999999986521122233467887 899999
Q ss_pred Eee--cccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 380 AFL--GRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 380 ~~~--~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
|+| + +.+|++|+.||+|++|+++.
T Consensus 303 ~~~~~~---------~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 303 WLELNG---------KTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EC--------------CCEEEEETTSEEEEEEC--
T ss_pred EecCCC---------ceEEEEecCCCcEEEEEecc
Confidence 998 5 78999999999999999875
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6e-45 Score=323.52 Aligned_cols=288 Identities=19% Similarity=0.199 Sum_probs=245.3
Q ss_pred eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEee
Q 046226 83 RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWR 158 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd 158 (434)
+..+++.+|.+.|++++| ++++|++|+.||.|++||+.+++.+..+..|...|.+++|+++ .+++|+.|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 456789999999999999 8999999999999999999999999999999999999999986 899999999999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-eeEEEcccCcc
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSE 237 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~ 237 (434)
+.+++.+..+. +|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|..
T Consensus 84 ~~~~~~~~~~~----------------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~ 141 (304)
T 2ynn_A 84 YNTGEKVVDFE----------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH 141 (304)
T ss_dssp TTTCCEEEEEE----------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS
T ss_pred CCCCcEEEEEe----------------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC
Confidence 98776655443 69999999999999999999999999999999877 55677889999
Q ss_pred CeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec--CCCEEEEEcCCCeEEEEEcC
Q 046226 238 PINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL--DDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 238 ~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~ 313 (434)
.|.+++|+| ++ .|++|+.|+.|++||++... . .......+...+..+.|+| ++.+|++|+.|+.|++||++
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~--~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--P---NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEETTCSS--C---SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC--c---cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 999999998 45 89999999999999987211 1 1222345667899999987 77899999999999999987
Q ss_pred cccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCC
Q 046226 314 WFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETED 391 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 391 (434)
... ....+.+|...|.+++|+ +.+|++|+.||.|++||+.++ +++..+..|...+.+++++|+.
T Consensus 217 ~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~---~~~~~~~~~~~~~~~~~~~~~~------- 282 (304)
T 2ynn_A 217 TKS----CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLNVGLERSWCIATHPTG------- 282 (304)
T ss_dssp TTE----EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---CEEEEECCSSSSEEEEEECTTC-------
T ss_pred CCc----cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC---ceeeeccCCCccEEEEEECCCC-------
Confidence 543 334567899999999986 559999999999999999987 7888899999999999999873
Q ss_pred ccc-EEEEeecCCeEEEEecCCC
Q 046226 392 EYC-TICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 392 ~~~-~l~s~~~Dg~v~iw~~~~~ 413 (434)
+. ++++|+. ..+.+|++.+.
T Consensus 283 -~~~~~asg~~-~g~~~~~~~~~ 303 (304)
T 2ynn_A 283 -RKNYIASGFD-NGFTVLSLGND 303 (304)
T ss_dssp -GGGCEEEEET-TEEEEEECC--
T ss_pred -CceEEEEecC-CceEEEEeccC
Confidence 33 4777665 45778887653
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.9e-45 Score=328.63 Aligned_cols=305 Identities=18% Similarity=0.234 Sum_probs=245.6
Q ss_pred ceeeeEEEeeccc-cEEEEEE--cCCEEEEEeCCCeEEEecCCCceeE---eeccCCCccEEEEEEeCC--EEEEEEcCC
Q 046226 81 SYRCISSVLKKDG-QILCIAV--GNGFIYTGSDSNVIRIWKQPEFTEC---GRLKAKTSMVVAMEVSHD--RVYAAYGDG 152 (434)
Q Consensus 81 ~~~~~~~~~~h~~-~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~l~~~~~--~l~~~s~dg 152 (434)
...++.++.+|.+ .|.+++| ++++||+|+.|++|+|||+.++... ....+|...|.+++|+|+ +|++++.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 4678889999988 9999999 8999999999999999999877543 224689999999999997 899999999
Q ss_pred eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC---eeE
Q 046226 153 KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS---KCI 229 (434)
Q Consensus 153 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~ 229 (434)
.|++||+......... .+.+|...|.+++|+|++++|++|+.|+.|++||+.++ +++
T Consensus 84 ~v~iw~~~~~~~~~~~--------------------~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVT--------------------TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp CEEEEEECCC-EEEEE--------------------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cEEEEEccCCCeEEEE--------------------EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEE
Confidence 9999998754321111 12369999999999999999999999999999999875 456
Q ss_pred EEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEE
Q 046226 230 ETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIH 308 (434)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 308 (434)
..+..|...|.+++|+|++ +|++++.|+.|++||++ .........+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 144 ~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~----~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE----EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec----CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence 7788899999999999999 99999999999999986 122334567788999999999999999999999999999
Q ss_pred EEEcCccccccc-----------ccCccc-CcccceEEEEee--CCEEEEecCCCcEEEEeccCCCce------eeEEEe
Q 046226 309 YWHKGWFSAQLQ-----------YGGALQ-GHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRH------TMLAVL 368 (434)
Q Consensus 309 i~d~~~~~~~~~-----------~~~~~~-~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~ 368 (434)
+||......... ....+. .|...|.+++|+ +..|++++.|+.|++|+....... ......
T Consensus 220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 299 (345)
T 3fm0_A 220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLH 299 (345)
T ss_dssp EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEET
T ss_pred EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeec
Confidence 999643221111 111222 378889999996 569999999999999998764211 112334
Q ss_pred eccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 369 VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 369 ~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
.+|.+.|++++|+|+. ..+|+||+.||+|++|++.++++..
T Consensus 300 ~~h~~~V~~v~~~p~~--------~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 300 QAHSQDVNCVAWNPKE--------PGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TSSSSCEEEEEECSSS--------TTEEEEEETTSCEEEEEECC-----
T ss_pred ccccCcEeEeEEeCCC--------ceEEEEcCCCCcEEEEEecCCCCcc
Confidence 6899999999999982 3599999999999999999887654
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.3e-44 Score=319.59 Aligned_cols=289 Identities=18% Similarity=0.369 Sum_probs=249.2
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIR 155 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~ 155 (434)
+.+....++.+|.+.|++++| ++++|++|+.||.|++|++.+++....+.+|...|.+++|+|+ .|++++.|+.|+
T Consensus 11 ~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 11 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 346778889999999999999 8999999999999999999999999999999999999999997 899999999999
Q ss_pred EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccC
Q 046226 156 VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH 235 (434)
Q Consensus 156 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 235 (434)
+||+.+++.+..+. +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|
T Consensus 91 vwd~~~~~~~~~~~----------------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 148 (312)
T 4ery_A 91 IWDVSSGKCLKTLK----------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 148 (312)
T ss_dssp EEETTTCCEEEEEE----------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEECCCCcEEEEEc----------------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC
Confidence 99998776554442 69999999999999999999999999999999999999999999
Q ss_pred ccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCc
Q 046226 236 SEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGW 314 (434)
Q Consensus 236 ~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 314 (434)
...|.+++|+|++ +|++++.||.|++||++. ..........+...+..++|+|++++|++++.||.|++||++.
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999999 999999999999999872 1112222345667899999999999999999999999999975
Q ss_pred ccccccccCcccCcccceE----EEE-eeCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCC
Q 046226 315 FSAQLQYGGALQGHTHAVM----CLA-SVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEET 389 (434)
Q Consensus 315 ~~~~~~~~~~~~~~~~~v~----~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 389 (434)
..... .+.+|...+. .+. .++.+|++|+.||.|++||+.++ ..+..+.+|.+.|.+++|+|+
T Consensus 224 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~p~------ 290 (312)
T 4ery_A 224 GKCLK----TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDVVISTACHPT------ 290 (312)
T ss_dssp TEEEE----EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---CEEEEECCCSSCEEEEEECSS------
T ss_pred CcEEE----EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---hhhhhhhccCCcEEEEeecCc------
Confidence 54332 3334443321 222 24679999999999999999987 778899999999999999999
Q ss_pred CCcccEEEEee--cCCeEEEEecC
Q 046226 390 EDEYCTICTGS--LDGVLKMWRVT 411 (434)
Q Consensus 390 ~~~~~~l~s~~--~Dg~v~iw~~~ 411 (434)
+.+|++++ .||+|++|+.+
T Consensus 291 ---~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 ---ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ---SSEEEEEECTTTCCEEEEECC
T ss_pred ---CCceEEEEccCCccEEEecCC
Confidence 88999987 69999999965
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-45 Score=334.08 Aligned_cols=291 Identities=14% Similarity=0.169 Sum_probs=231.1
Q ss_pred EeeccccEEEEEE--cCCEEEEEeC------CCeEEEecCCCceeEee----ccCCCccEEEEEEeCC-EEEEEEcCCeE
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSD------SNVIRIWKQPEFTECGR----LKAKTSMVVAMEVSHD-RVYAAYGDGKI 154 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~------dg~i~iwd~~~~~~~~~----~~~~~~~v~~l~~~~~-~l~~~s~dg~i 154 (434)
...|++.|.+++| ||++|++|+. |+.|++|+..++..... ...|...|.+++|+|+ .+++++.||+|
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v 117 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAV 117 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEE
Confidence 4569999999999 9999999998 78899999887654433 3468889999999997 88899999999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEccc
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA 234 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 234 (434)
++||+.+++....... ...+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+
T Consensus 118 ~lWd~~~~~~~~~~~~------------------~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 118 ELWEILEKESLLVNKF------------------AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp EEC--------CCCCE------------------EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEeeccccceeEEEee------------------ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 9999987654332211 1126999999999999999999999999999999999999999999
Q ss_pred CccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC-CCEEEEEcCCCeEEEEE
Q 046226 235 HSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD-DGLLYGGCTDGYIHYWH 311 (434)
Q Consensus 235 ~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d 311 (434)
|...|.+++|++++ ++++++.|+.|++||++..... .......+...+.+++|+|+ +.+|++|+.|+.|++||
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~----~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA----TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVN 255 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB----CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee----eeeeeccccccccchhhhhcccceEEEeecccceeEEE
Confidence 99999999999887 7999999999999998722111 11233456678999999997 56889999999999999
Q ss_pred cCcccccccccCcccCcccceEEEEee--C-CEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCC
Q 046226 312 KGWFSAQLQYGGALQGHTHAVMCLASV--A-NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 388 (434)
++.... ...+.+|...|.+++|+ + ++|++|+.|++|+|||++++ +++.. .+|.+.|++++|+|..
T Consensus 256 ~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---~~~~~-~~H~~~V~~vafsP~d---- 323 (357)
T 4g56_B 256 IKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---EVFRD-LSHRDFVTGVAWSPLD---- 323 (357)
T ss_dssp SSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---EEEEE-CCCSSCEEEEEECSSS----
T ss_pred CCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---cEeEE-CCCCCCEEEEEEeCCC----
Confidence 875433 34567899999999986 3 48999999999999999986 55544 4899999999999832
Q ss_pred CCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 389 TEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 389 ~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
+.+|+|+|.||+|++|++.+..+.
T Consensus 324 ----~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 324 ----HSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ----TTEEEEEETTSCEEEEECC-----
T ss_pred ----CCEEEEEcCCCeEEEEECCCCCcc
Confidence 889999999999999999876543
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.9e-46 Score=340.11 Aligned_cols=304 Identities=17% Similarity=0.266 Sum_probs=251.5
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIR 155 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~ 155 (434)
....+.+++.+|.+.|++++| ++++|++|+.||+|+|||+.+++....+..|...|.+++|+|+ .+++++.|+.|+
T Consensus 54 ~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~ 133 (380)
T 3iz6_a 54 TDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACS 133 (380)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCE
T ss_pred ceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE
Confidence 356788999999999999999 8999999999999999999999999999999999999999997 899999999999
Q ss_pred EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC-CCEEEEEecCCcEEEEEcCCCeeEEEc--
Q 046226 156 VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS-DDTLYSASLDKTIKVWRIRDSKCIETI-- 232 (434)
Q Consensus 156 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~-- 232 (434)
+||+......... ... ...+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+
T Consensus 134 iw~~~~~~~~~~~--------~~~-------~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 198 (380)
T 3iz6_a 134 IFNLSSQADRDGN--------MPV-------SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS 198 (380)
T ss_dssp EEECCCCSSCCCS--------STT-------CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC
T ss_pred EEECCCCccccCC--------ccc-------eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec
Confidence 9998653211000 000 0123479999999999997 457999999999999999999988877
Q ss_pred ---ccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeE
Q 046226 233 ---QAHSEPINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYI 307 (434)
Q Consensus 233 ---~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 307 (434)
.+|...|.++.+++ ++ ++++|+.|+.|++||++. .......+.+|...|.+++|+|++++|++|+.||.|
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 273 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI-----TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTC 273 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT-----TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCE
T ss_pred ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC-----CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeE
Confidence 57889999999987 55 999999999999999872 123345677899999999999999999999999999
Q ss_pred EEEEcCcccccccccCc---ccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEe----eccccceeEE
Q 046226 308 HYWHKGWFSAQLQYGGA---LQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVL----VGHRGPIRCA 378 (434)
Q Consensus 308 ~i~d~~~~~~~~~~~~~---~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~~ 378 (434)
++||++.......+... ...+...|.+++|+ +++|++|+.||.|++||+..+ +.+..+ .+|.+.|+++
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~---~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA---EMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC---CEEEEECCSCSSCCCCCCEE
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC---ceEEEEecccCCCCCceEEE
Confidence 99999865443322111 11233346777775 789999999999999999887 444444 6899999999
Q ss_pred EEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
+|+|+ +.+|+||+.||+|++|++...++
T Consensus 351 ~~s~d---------g~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 351 GLSSD---------GSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EECSS---------SSEEEEECTTSCEEEEECCSSSS
T ss_pred EECCC---------CCEEEEeeCCCCEEEEecCCCcc
Confidence 99999 99999999999999999987653
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.1e-45 Score=329.09 Aligned_cols=286 Identities=16% Similarity=0.163 Sum_probs=228.2
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc-----------eeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEE
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF-----------TECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRV 156 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~-----------~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~v 156 (434)
|...|.+++| +|++|++++ |+++++||.... ........+...|.+++|+++ .+++|+.||+|++
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~l 107 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVEL 107 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEE
Confidence 6677999999 899998887 778888873211 111111235667999999998 8999999999999
Q ss_pred eecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCc
Q 046226 157 WRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS 236 (434)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 236 (434)
||+.+++........ ..+|.+.|++++|+|++++|++|+.|++|++||+++++++..+.+|.
T Consensus 108 Wd~~~~~~~~~~~~~------------------~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 169 (344)
T 4gqb_B 108 WELDENETLIVSKFC------------------KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA 169 (344)
T ss_dssp EEECTTSSCEEEEEE------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeccCCCceeEeecc------------------ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC
Confidence 999887765544321 12699999999999999999999999999999999999999999999
Q ss_pred cCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC-CCEEEEEcCCCeEEEEEcC
Q 046226 237 EPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD-DGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 237 ~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~ 313 (434)
..|.+++|++++ +|++++.|+.|++||++.. .... ......+...+.+++|+|+ +++|++|+.||.|++||++
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~--~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--KPAS--QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--SCEE--ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred CceEEEEecCCCCCceeeecccccccccccccc--ceee--eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 999999999987 7899999999999999722 1111 1122345567899999994 5788999999999999987
Q ss_pred cccccccccCcccCcccceEEEEee--C-CEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCC
Q 046226 314 WFSAQLQYGGALQGHTHAVMCLASV--A-NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETE 390 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 390 (434)
..+. ...+.+|...|.+++|+ + ++|++|+.|++|+|||+.++ + +..+.+|.+.|++++|+|+.
T Consensus 246 ~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---~-~~~~~~H~~~V~~v~~sp~~------ 311 (344)
T 4gqb_B 246 STSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---E-LFRSQAHRDFVRDATWSPLN------ 311 (344)
T ss_dssp C--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---E-EEEECCCSSCEEEEEECSSS------
T ss_pred CCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---c-EEEEcCCCCCEEEEEEeCCC------
Confidence 5433 34567899999999996 3 47999999999999999876 3 34578999999999999983
Q ss_pred CcccEEEEeecCCeEEEEecCCCCc
Q 046226 391 DEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 391 ~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
..+|+|+|.||+|++|++.+...
T Consensus 312 --~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 --HSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp --TTEEEEEETTSCEEEEECCC---
T ss_pred --CeEEEEEcCCCeEEEEECCCCCC
Confidence 45788999999999999987643
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.8e-44 Score=349.53 Aligned_cols=347 Identities=15% Similarity=0.197 Sum_probs=271.2
Q ss_pred CCCcccccCCCCCCCCCCCCC-ccCCCCCCCcccce-----eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecC
Q 046226 48 SSPISLHTSPLSSPRHPFNPT-AAAGSSSPETSSSY-----RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQ 119 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~ 119 (434)
...+.+|...+.+..+.++.. .+++++.|.+++.| +++.++.+|.+.|.+++| ++++|++|+.|++|++||+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 345678888888888888876 48899999887665 467889999999999999 8999999999999999999
Q ss_pred CCceeEeecc-------CCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccC--------C------
Q 046226 120 PEFTECGRLK-------AKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPK--------T------ 176 (434)
Q Consensus 120 ~~~~~~~~~~-------~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------~------ 176 (434)
.+++.+..+. +|...|.+++|+|+ .|++++.|++|++||+.+++....+....... .
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9998888774 79999999999997 89999999999999998776554443210000 0
Q ss_pred ---CCceeEEEe----ccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc-cc--------------
Q 046226 177 ---GGAVRNLIV----GKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QA-------------- 234 (434)
Q Consensus 177 ---~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~-------------- 234 (434)
...++.... ....+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+ ..
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 000111000 01134579999999999999999999999999999999876543322 01
Q ss_pred -------------------------------------------------------------------CccCeEEEEEcCC
Q 046226 235 -------------------------------------------------------------------HSEPINALVVADD 247 (434)
Q Consensus 235 -------------------------------------------------------------------~~~~v~~~~~~~~ 247 (434)
|...+.+++|+|+
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 1234678899999
Q ss_pred C-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCccc
Q 046226 248 G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQ 326 (434)
Q Consensus 248 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 326 (434)
+ +|++|+.|+.|++||+.. . ....... ..|...|.+++|+|++++|++++.|+.|++||+...... .......
T Consensus 460 g~~lasgs~D~~v~lwd~~~---~-~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~-~~~~~~~ 533 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYKLSG---A-SVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL-AHTNSWT 533 (611)
T ss_dssp SCEEEEEETTSEEEEEEEET---T-EEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE-SCCCCCC
T ss_pred CCEEEEeCCCCeEEEEEccC---C-ceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCce-eeeeeee
Confidence 9 999999999999999861 1 1112222 568899999999999999999999999999998642111 1111234
Q ss_pred CcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeecc-ccceeEEEEeecccCCCCCCcccEEEEeecCC
Q 046226 327 GHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH-RGPIRCAIAFLGRFGEETEDEYCTICTGSLDG 403 (434)
Q Consensus 327 ~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg 403 (434)
+|...|.+++|+ +++|++|+.|++|++||+.++.. ..+..+.+| ...|.+++|+|+ +. |++++.||
T Consensus 534 ~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~-~~~~~~~~h~~~~v~~v~fs~d---------~~-l~s~~~D~ 602 (611)
T 1nr0_A 534 FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD-HPIIIKGAHAMSSVNSVIWLNE---------TT-IVSAGQDS 602 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS-CCEEETTSSTTSCEEEEEEEET---------TE-EEEEETTS
T ss_pred ecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc-ccchhhccCcccCeeEEEEcCC---------CE-EEEecCCC
Confidence 599999999996 66999999999999999987632 122567789 899999999998 77 99999999
Q ss_pred eEEEEecC
Q 046226 404 VLKMWRVT 411 (434)
Q Consensus 404 ~v~iw~~~ 411 (434)
+|++|++.
T Consensus 603 ~i~lW~~~ 610 (611)
T 1nr0_A 603 NIKFWNVP 610 (611)
T ss_dssp CEEEEECC
T ss_pred CEEEEecc
Confidence 99999973
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-44 Score=319.68 Aligned_cols=287 Identities=20% Similarity=0.322 Sum_probs=241.8
Q ss_pred cceeeeEEEeeccccEEEEEE---cCCEEEEEeCCCeEEEecCCC-----ceeEeeccCCCccEEEEEEeCC--EEEEEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPE-----FTECGRLKAKTSMVVAMEVSHD--RVYAAY 149 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~l~~~~~--~l~~~s 149 (434)
+.+.+..++.+|.+.|++++| ++++|++|+.|++|++|++.. +..+..+.+|...|.+++|+++ .+++++
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 356778889999999999999 348999999999999999753 3456788999999999999997 899999
Q ss_pred cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeE
Q 046226 150 GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCI 229 (434)
Q Consensus 150 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 229 (434)
.|++|++||+.+++....+. +|...|.+++|+|++.+|++|+.|++|++||++ ++++
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~----------------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~ 141 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV----------------------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCL 141 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE----------------------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEE
T ss_pred CCCEEEEEECCCCCeeEEEc----------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeE
Confidence 99999999998775544432 699999999999999999999999999999996 5678
Q ss_pred EEcccCccCeEEEEEcCC------C-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc
Q 046226 230 ETIQAHSEPINALVVADD------G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~------~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 302 (434)
..+.+|...|.++.+.|. + .+++++.|+.|++||++ .......+.+|...|.+++|+|++++|++|+
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~------~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN------QFQIEADFIGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETT------TTEEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC------cchhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence 888899999999999884 3 79999999999999987 3345566788999999999999999999999
Q ss_pred CCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEee--------ccc
Q 046226 303 TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLV--------GHR 372 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~h~ 372 (434)
.||.|++||+........ +.. ...|.+++|+ +.+|++++. +.+++|++... ..+..+. .|.
T Consensus 216 ~dg~i~iwd~~~~~~~~~----~~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~---~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 216 KDGEIMLWNLAAKKAMYT----LSA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQ---YLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp TTCEEEEEETTTTEEEEE----EEC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETTE---EEEEEECCCCTTCCGGGC
T ss_pred CCCeEEEEECCCCcEEEE----ecC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcC---eeeeccCccccccccCcC
Confidence 999999999976543332 222 3578888886 557777765 45999999875 4444433 356
Q ss_pred cceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 373 GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 373 ~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
..+.+++|+|+ |++|++|+.||.|++||+.++
T Consensus 287 ~~v~~~~~spd---------g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 287 PHAVSLAWSAD---------GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCEEEEEECTT---------SSEEEEEETTSCEEEEEEEEC
T ss_pred cceeEEEECCC---------CCEEEEeecCceEEEEEEeec
Confidence 77999999999 999999999999999998764
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-43 Score=320.15 Aligned_cols=290 Identities=16% Similarity=0.221 Sum_probs=237.1
Q ss_pred cceeeeEEEeeccccEEEEEE--------cCCEEEEEeCCCeEEEecCCC-------ceeEeeccCCCccEEEEEEeCC-
Q 046226 80 SSYRCISSVLKKDGQILCIAV--------GNGFIYTGSDSNVIRIWKQPE-------FTECGRLKAKTSMVVAMEVSHD- 143 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--------~~~~l~tg~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~~~- 143 (434)
....+..++.+|.+.|++++| ++++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|+
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 456678889999999999998 678999999999999999864 3456778999999999999997
Q ss_pred -EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEE
Q 046226 144 -RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWR 222 (434)
Q Consensus 144 -~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd 222 (434)
.+++++.|++|++||+.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~----------------------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFV----------------------GHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEE----------------------CCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEc----------------------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 89999999999999998776554442 6999999999999999999999999999999
Q ss_pred cCCCeeEEEcc---cCccCeEEEEEcCCC-----------eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEE
Q 046226 223 IRDSKCIETIQ---AHSEPINALVVADDG-----------VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKT 288 (434)
Q Consensus 223 ~~~~~~~~~~~---~~~~~v~~~~~~~~~-----------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 288 (434)
+... ...... .|...|.+++|+|++ ++++++.|+.|++||.. ......+..|...|.+
T Consensus 147 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-------~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 147 ILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-------FQIRYTFKAHESNVNH 218 (343)
T ss_dssp SSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-------TEEEEEEECCSSCEEE
T ss_pred ccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-------CceeEEEcCccccceE
Confidence 9743 333333 688899999999874 79999999999999954 2344567789999999
Q ss_pred EEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC--CEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 289 LTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA--NYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 289 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
++|+|++++|++|+.||.|++||+........ .+ .+...|.+++|++ .+++ ++.|+.|++||+.++... .+.
T Consensus 219 ~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~---~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~-~~~ 292 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDKKLLIWDILNLTYPQR---EF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKA-PVC 292 (343)
T ss_dssp EEECTTSSEEEEEETTCEEEEEESSCCSSCSE---EE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSC-SEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcccce---ee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCC-ceE
Confidence 99999999999999999999999853322211 11 2344688998874 4555 556888999999876321 222
Q ss_pred Eee-----------ccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 367 VLV-----------GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 367 ~~~-----------~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.+. +|...|.+++|+|+ +.+|++|+.||.|++|+++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 293 TIEAEPITKAEGQKGKNPQCTSLAWNAL---------GKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp ECCCCSGGGBTTBCCSCCCEEEEEECSS---------SCCEEEEETTSEEEEEEEEEEE
T ss_pred EeecCcchhhhhhcCCCCceEEEEECCC---------CCeEEEecCCceEEEEEEEccC
Confidence 332 78889999999999 8999999999999999987653
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-43 Score=323.77 Aligned_cols=294 Identities=23% Similarity=0.366 Sum_probs=239.5
Q ss_pred EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc------------------cEEEEEEeCC--EE
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS------------------MVVAMEVSHD--RV 145 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~------------------~v~~l~~~~~--~l 145 (434)
..+|.+.|.|++| +|++||+|+ ++.++||++.+++.+..+..|.. .|.+++|+|+ .|
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 3479999999999 899999987 78999999999988887765532 4999999997 89
Q ss_pred EEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC
Q 046226 146 YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD 225 (434)
Q Consensus 146 ~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 225 (434)
++++.|+.|++||+.+++....+ .+|...|.+++|+|++++|++++.|++|++||+++
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~----------------------~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMIL----------------------QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEE----------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEcCCCeEEEEECCCCcEEEEE----------------------ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 99999999999999866443333 26999999999999999999999999999999999
Q ss_pred CeeEEEcccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEE---EEEecccccCeEEEEEecCCCEEEE
Q 046226 226 SKCIETIQAHSEPINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTL---ILTLTAKYSPVKTLTLTLDDGLLYG 300 (434)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~ 300 (434)
+++...+. +...+.+++++| ++ +|++++.|+.|++||++.. ...... .....+|...|.+++|+|++++|++
T Consensus 197 ~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 197 GQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC--CEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred CeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 99887776 567899999998 66 9999999999999998721 111111 1122578889999999999999999
Q ss_pred EcCCCeEEEEEcCccccc--------ccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeec
Q 046226 301 GCTDGYIHYWHKGWFSAQ--------LQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVG 370 (434)
Q Consensus 301 ~~~dg~i~i~d~~~~~~~--------~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 370 (434)
|+.||.|++||++..... ......+.+|...|.+++++ +.+|++|+.|+.|++||+.++ .++..+.+
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~---~~~~~l~~ 350 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG---NPLLMLQG 350 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC---CEEEEEEC
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC---eEEEEECC
Confidence 999999999998753321 11223456888999999985 679999999999999999987 67888999
Q ss_pred cccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 371 HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 371 h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
|.+.|.+++|+++. .+.+++.+|+||+.||+|++|++...
T Consensus 351 h~~~v~~v~~~~~~---~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 351 HRNSVISVAVANGS---SLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CSSCEEEEEECSSC---TTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCCEEEEEecCCc---CcCCCCCEEEEECCCCcEEECccccc
Confidence 99999999998742 23445889999999999999998754
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.4e-43 Score=340.53 Aligned_cols=316 Identities=14% Similarity=0.129 Sum_probs=260.6
Q ss_pred CCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc--eeEe
Q 046226 56 SPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF--TECG 126 (434)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~--~~~~ 126 (434)
.......+++++..+++++. ..+..| +.+.++.+|.+.|++++| +|++||+|+.||+|+|||+.++ ....
T Consensus 19 g~~~~~~~spdg~~l~~~~~-~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNG-TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TCCCCCEECTTSSEEEEEET-TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE
T ss_pred CceeEEeeCCCCCEEEeCCC-CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE
Confidence 34455566778888877663 344444 456788999999999999 8999999999999999998653 3456
Q ss_pred eccCCCccEEEEEEeCC--EEEEEEcC----CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE
Q 046226 127 RLKAKTSMVVAMEVSHD--RVYAAYGD----GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 127 ~~~~~~~~v~~l~~~~~--~l~~~s~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 200 (434)
.+..|.+.|.+++|+|+ .|++++.+ +.|++||.. ..... +.+|...|.++
T Consensus 98 ~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~~~~~----------------------l~gh~~~v~~v 153 (611)
T 1nr0_A 98 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--TSNGN----------------------LTGQARAMNSV 153 (611)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--CBCBC----------------------CCCCSSCEEEE
T ss_pred eecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--CCcce----------------------ecCCCCCceEE
Confidence 78889999999999998 67777764 478899843 22222 23799999999
Q ss_pred EEecCCC-EEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEE
Q 046226 201 AINVSDD-TLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 201 ~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 278 (434)
+|+|++. .|++|+.|++|++||..+++++..+.+|...|.+++|+|++ +|++++.|+.|++||+.. ......
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~------g~~~~~ 227 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD------GTKTGV 227 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------CCEEEE
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC------CcEeee
Confidence 9999987 59999999999999999999999999999999999999999 999999999999999861 222333
Q ss_pred ec-------ccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcE
Q 046226 279 LT-------AKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTS 351 (434)
Q Consensus 279 ~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i 351 (434)
+. +|...|.+++|+|++++|++++.|++|++||++.......+.. -..+...+.++.++++.+++++.|+.+
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV-GTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC-CCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 32 6889999999999999999999999999999876543332211 123445667788899999999999999
Q ss_pred EEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 352 RVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 352 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
++||...+ .....+.+|...|++++|+|+ +++|++++.||+|++||+.+++.
T Consensus 307 ~~~~~~~~---~~~~~~~gh~~~v~~l~~spd---------g~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 307 NFVNPELG---SIDQVRYGHNKAITALSSSAD---------GKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp EEEETTTT---EEEEEECCCSSCEEEEEECTT---------SSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEeCCCC---CcceEEcCCCCCEEEEEEeCC---------CCEEEEEeCCCcEEEEECCCCce
Confidence 99999876 677788999999999999999 99999999999999999988754
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.7e-42 Score=311.61 Aligned_cols=291 Identities=19% Similarity=0.269 Sum_probs=240.5
Q ss_pred ccceeeeEEEeeccccEEEEEE--c-CCEEEEEeCCCeEEEecCCCc-----eeEeeccCCCccEEEEEEeCC--EEEEE
Q 046226 79 SSSYRCISSVLKKDGQILCIAV--G-NGFIYTGSDSNVIRIWKQPEF-----TECGRLKAKTSMVVAMEVSHD--RVYAA 148 (434)
Q Consensus 79 ~~~~~~~~~~~~h~~~v~~~~~--~-~~~l~tg~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~l~~~~~--~l~~~ 148 (434)
.+...+..+|.||.+.|++|+| + +++|+||+.||+|+|||+.+. .....+.+|...|.+++|+|+ .++++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3456777889999999999999 3 689999999999999998653 356778999999999999997 89999
Q ss_pred EcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee
Q 046226 149 YGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC 228 (434)
Q Consensus 149 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 228 (434)
+.|+.|++|+........... .+...+..+.+++++.+|++++.|+.+++||+.....
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFV----------------------GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEE----------------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred cccccceEEeecccceeeeec----------------------CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce
Confidence 999999999987654433332 4778889999999999999999999999999976543
Q ss_pred -EEEcccCccCeEEEEEcCCC---eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC
Q 046226 229 -IETIQAHSEPINALVVADDG---VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD 304 (434)
Q Consensus 229 -~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 304 (434)
......|...+.+++|++++ .+++++.|+.|++||++ .......+.+|...|.+++|+|++++|++|+.|
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA------NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC------CCceeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 44566789999999998775 78899999999999987 344566778899999999999999999999999
Q ss_pred CeEEEEEcCcccccccccCcccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEE---------Eeeccccc
Q 046226 305 GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLA---------VLVGHRGP 374 (434)
Q Consensus 305 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~h~~~ 374 (434)
|.|++||++....... +. +...|.++.+++ ..+++++.|+.|++||++++ ..+. ...+|...
T Consensus 237 g~i~iwd~~~~~~~~~----~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYT----LD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGK---IIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp CEEEEEETTTTEEEEE----EE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTT---EEEEEECCC-------CCCCC
T ss_pred CeEEEEEeccCceeee----ec-CCceEEeeecCCCCceeeccCCCEEEEEECCCC---eEEEeccccceeeeccCCCCC
Confidence 9999999976544332 22 335788888874 46777888999999999876 3333 34578999
Q ss_pred eeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 375 IRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 375 v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
|++++|+|+ +++|++|+.||.|+|||+.+|+
T Consensus 309 v~~l~~s~d---------g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSAD---------GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTT---------SSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCC---------CCEEEEEeCCCEEEEEeCCCcC
Confidence 999999999 8999999999999999999886
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.5e-43 Score=337.53 Aligned_cols=313 Identities=23% Similarity=0.398 Sum_probs=271.2
Q ss_pred CCCCcccccCCCCCCCCCCCCCccCCCCCCCccccee----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC
Q 046226 47 FSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP 120 (434)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~ 120 (434)
....+..|...+.+..+.+++..+++++.+..+..|+ ++..+.+|.+.|.+++| ++++|++++.|+.|++||..
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 333 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 3445667778888888888999999988888876654 56778899999999999 89999999999999999975
Q ss_pred CceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeE
Q 046226 121 EFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198 (434)
Q Consensus 121 ~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 198 (434)
. ..+..+..|...|.+++|+|+ .+++++.|+.|++||.. ++.+..+ .+|...|.
T Consensus 334 ~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~----------------------~~~~~~v~ 389 (577)
T 2ymu_A 334 G-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTL----------------------TGHSSSVR 389 (577)
T ss_dssp S-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEE----------------------ECCSSCEE
T ss_pred C-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEe----------------------cCCCCCeE
Confidence 4 556778899999999999997 89999999999999953 2222222 26999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEE
Q 046226 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLIL 277 (434)
Q Consensus 199 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 277 (434)
+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++ +|++++.|+.|++||+. .....
T Consensus 390 ~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-------~~~~~ 461 (577)
T 2ymu_A 390 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-------GQLLQ 461 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------SCEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-------CCEEE
Confidence 9999999999999999999999995 678888999999999999999999 99999999999999965 23455
Q ss_pred EecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEe
Q 046226 278 TLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWA 355 (434)
Q Consensus 278 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd 355 (434)
.+..|...|.+++|+|++++|++++.|+.|++||... +....+.+|...|.+++|+ +++|++++.||.|++||
T Consensus 462 ~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-----~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 462 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-----CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 6778999999999999999999999999999999632 2334567899999999986 67999999999999999
Q ss_pred ccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEe
Q 046226 356 REQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409 (434)
Q Consensus 356 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~ 409 (434)
.. + +++..+.+|.+.|++++|+|+ +++|+|++.||+|++||
T Consensus 537 ~~-~---~~~~~~~~h~~~v~~~~fs~d---------g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 537 RN-G---QLLQTLTGHSSSVWGVAFSPD---------GQTIASASSDKTVKLWN 577 (577)
T ss_dssp TT-S---CEEEEEECCSSCEEEEEECTT---------SSCEEEEETTSCEEEEC
T ss_pred CC-C---CEEEEEcCCCCCEEEEEEcCC---------CCEEEEEeCCCEEEEeC
Confidence 64 3 678889999999999999999 89999999999999997
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-41 Score=302.74 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=220.4
Q ss_pred eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE
Q 046226 123 TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 123 ~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 200 (434)
+....+.+|...|.+++|+|+ .+++++.||.|++||+.++..+..+. .|..+|.++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~----------------------~~~~~v~~~ 61 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ----------------------VTETPVRAG 61 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----------------------CCSSCEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee----------------------ccCCcEEEE
Confidence 345678899999999999997 89999999999999998765544442 588999999
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEe
Q 046226 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 201 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
+|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.|+.|++||++. .......+
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~-----~~~~~~~~ 136 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN-----NWALEQTF 136 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG-----TTEEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC-----Ccchhhhh
Confidence 999999999999999999999999999999999999999999999999 999999999999999871 22345567
Q ss_pred cccccCeEEEEEec-CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee----CCEEEEecCCCcEEEE
Q 046226 280 TAKYSPVKTLTLTL-DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV----ANYVISGSADSTSRVW 354 (434)
Q Consensus 280 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~s~~~dg~i~iw 354 (434)
.+|...|.+++|+| ++.+|++|+.|+.|++||++........ ..+|...+..+.+. +.+|++|+.|+.|++|
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL---TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE---ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee---ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 88999999999999 6789999999999999998754433322 23566677777764 4699999999999999
Q ss_pred eccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 355 AREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 355 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
|++++ .++..+.+|...|.+++|+|+ +.+|++|+.||+|++||+.+++...
T Consensus 214 d~~~~---~~~~~~~~h~~~v~~~~~~p~---------~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 214 DYQTK---SCVATLEGHMSNVSFAVFHPT---------LPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp ETTTT---EEEEEEECCSSCEEEEEECSS---------SSEEEEEETTSCEEEEETTTCCEEE
T ss_pred eCCCC---ccceeeCCCCCCEEEEEECCC---------CCEEEEEcCCCeEEEEECCCCceee
Confidence 99987 889999999999999999999 8899999999999999999877543
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-41 Score=329.08 Aligned_cols=315 Identities=24% Similarity=0.399 Sum_probs=273.8
Q ss_pred CCCCcccccCCCCCCCCCCCCCccCCCCCCCcccce----eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC
Q 046226 47 FSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSY----RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP 120 (434)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~ 120 (434)
....+..|...+.+..+.+++..+++++.+..++.| +++..+.+|...|.+++| ++++|++++.|+.|++||.
T Consensus 213 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~- 291 (577)
T 2ymu_A 213 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR- 291 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-
T ss_pred EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-
Confidence 344566788888888888899999999888887765 467888999999999999 8999999999999999996
Q ss_pred CceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeE
Q 046226 121 EFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198 (434)
Q Consensus 121 ~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 198 (434)
+++....+.+|...|.+++|+|+ .+++++.|+.|++||..... ...+ .+|...|.
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~----------------------~~~~~~v~ 348 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTL----------------------TGHSSSVW 348 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEE----------------------CCCSSCEE
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEE----------------------eCCCCCEE
Confidence 56777888999999999999997 89999999999999975432 1111 26899999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEE
Q 046226 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLIL 277 (434)
Q Consensus 199 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 277 (434)
+++|+|++++|++++.||.|++||. +++.+..+..|...|.+++|+|++ +|++++.|+.|++||.. .....
T Consensus 349 ~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-------~~~~~ 420 (577)
T 2ymu_A 349 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-------GQLLQ 420 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-------CCEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-------CCEEE
Confidence 9999999999999999999999995 678888999999999999999999 99999999999999854 23455
Q ss_pred EecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEe
Q 046226 278 TLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWA 355 (434)
Q Consensus 278 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd 355 (434)
.+..|...|.+++|+|++++|++++.|+.|++||+.. .....+.+|...|.+++|+ +++|++++.|+.|++||
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-----CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence 6778999999999999999999999999999999642 2233566899999999986 67999999999999999
Q ss_pred ccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 356 REQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 356 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
.. + +++..+.+|...|++++|+|+ +++|++++.||.|++||..
T Consensus 496 ~~-~---~~~~~~~~h~~~v~~l~~s~d---------g~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 496 RN-G---QLLQTLTGHSSSVRGVAFSPD---------GQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp TT-S---CEEEEEECCSSCEEEEEECTT---------SSCEEEEETTSEEEEECTT
T ss_pred CC-C---CEEEEEeCCCCCEEEEEEcCC---------CCEEEEEECcCEEEEEeCC
Confidence 64 3 678889999999999999999 8999999999999999964
No 21
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-42 Score=319.01 Aligned_cols=278 Identities=20% Similarity=0.310 Sum_probs=248.2
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC
Q 046226 48 SSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP 120 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~ 120 (434)
...+.+|..++.+..+.++...+++++.|.+++.|+ ++.++.+|.+.|.+++| ++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 446778999999999999999999999998887765 57889999999999999 78999999999999999999
Q ss_pred CceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeE
Q 046226 121 EFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198 (434)
Q Consensus 121 ~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 198 (434)
+++.+..+.+|...|.+++|+|+ .+++++.|+.|++||+.++..+..+. +|...|.
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~----------------------~h~~~v~ 238 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT----------------------GHREWVR 238 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----------------------CCSSCEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----------------------CCCccEE
Confidence 99999999999999999999996 89999999999999998776554442 6999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC--------------------C-eEEEEeCCC
Q 046226 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD--------------------G-VLYSASDDA 257 (434)
Q Consensus 199 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~-~l~s~~~dg 257 (434)
+++|++++.+|++|+.|+.|++||+.++++...+..|...|.+++|+|+ + +|++|+.|+
T Consensus 239 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999985 4 799999999
Q ss_pred eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEe
Q 046226 258 TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS 337 (434)
Q Consensus 258 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 337 (434)
.|++||++ .......+.+|...|.+++|+|++++|++|+.||.|++||+.... ....+.+|...|.+++|
T Consensus 319 ~i~iwd~~------~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~----~~~~~~~h~~~v~~l~~ 388 (410)
T 1vyh_C 319 TIKMWDVS------TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR----CMKTLNAHEHFVTSLDF 388 (410)
T ss_dssp EEEEEETT------TTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC----CCEEEECCSSCEEEEEE
T ss_pred eEEEEECC------CCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEEEE
Confidence 99999987 334566778899999999999999999999999999999986443 33456789999999999
Q ss_pred e--CCEEEEecCCCcEEEEecc
Q 046226 338 V--ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 338 ~--~~~l~s~~~dg~i~iwd~~ 357 (434)
+ +.+|++|+.||.|++|+++
T Consensus 389 ~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 389 HKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSSSCEEEEETTSEEEEEC--
T ss_pred cCCCCEEEEEeCCCcEEEEeCC
Confidence 7 5599999999999999863
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=307.47 Aligned_cols=277 Identities=18% Similarity=0.208 Sum_probs=243.2
Q ss_pred CCcccccCCCCCCCCCC----CCCccCCCCCCCcccceee-------eEEEeeccccEEEEEE--cCCEEEEEeCCCeEE
Q 046226 49 SPISLHTSPLSSPRHPF----NPTAAAGSSSPETSSSYRC-------ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIR 115 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~ 115 (434)
+.+.+|...+.+..+.+ ++..+++++.|.+++.|+. ...+.+|...|.++++ ++.++++|+.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 45568888888887755 3568999999999998864 4468899999999999 789999999999999
Q ss_pred EecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc
Q 046226 116 IWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH 193 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
+||+.+++.+..+..|...+.+++|+|+ .+++++.||.|++||+..++....+. .|
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~----------------------~~ 163 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD----------------------TR 163 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE----------------------CS
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec----------------------CC
Confidence 9999999999999999999999999997 89999999999999998765544332 57
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcce
Q 046226 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQL 272 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~ 272 (434)
...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|++ +|++++.|+.|++||++ .
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~------~ 237 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ------H 237 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT------T
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC------C
Confidence 8889999999999999999999999999999999999999999999999999999 99999999999999987 2
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCc
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADST 350 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~ 350 (434)
......+.+|...|.+++|+|++.+|++++.|+.|++||++.... ...+.+|...|.+++|+ +++|++++.||.
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~----~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC----VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE----EEEEcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 345567788999999999999999999999999999999875433 33556899999999996 569999999999
Q ss_pred EEEEecc
Q 046226 351 SRVWARE 357 (434)
Q Consensus 351 i~iwd~~ 357 (434)
|++||+.
T Consensus 314 i~vwd~p 320 (321)
T 3ow8_A 314 IHIYDCP 320 (321)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999964
No 23
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.4e-41 Score=314.59 Aligned_cols=318 Identities=22% Similarity=0.357 Sum_probs=271.8
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeeccccEEEEEEcCCEEEEEeCCCeEEEecCCCc
Q 046226 48 SSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEF 122 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~ 122 (434)
...+.+|...+... ..+++..+++++.+.+++.| +++.++.+|.+.|.+++|++++|++|+.||.|++||+.++
T Consensus 111 ~~~l~~h~~~v~~~-~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 111 PKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp CEEEECSTTSCEEE-EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred eEEecccCCCcEEE-EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC
Confidence 34566777655332 34567888898888876655 4578899999999999999999999999999999999999
Q ss_pred eeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE
Q 046226 123 TECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202 (434)
Q Consensus 123 ~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 202 (434)
+.+..+.+|...|.++.++++.+++++.||.|++||+.+++....+. +|...|.+++|
T Consensus 190 ~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~----------------------~~~~~v~~~~~ 247 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM----------------------GHVAAVRCVQY 247 (445)
T ss_dssp EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEE----------------------CCSSCEEEEEE
T ss_pred cEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEc----------------------CCcccEEEEEE
Confidence 99999999999999999999999999999999999998766554442 69999999999
Q ss_pred ecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecc
Q 046226 203 NVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTA 281 (434)
Q Consensus 203 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 281 (434)
+++++++|+.||.|++||+++++.+..+.+|...|.++.+ ++ .+++++.|+.|++||++ .......+..
T Consensus 248 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~~ 317 (445)
T 2ovr_B 248 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE------TGNCIHTLTG 317 (445)
T ss_dssp --CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT------TCCEEEEECC
T ss_pred --CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC------CCCEEEEEcC
Confidence 7889999999999999999999999999999999999999 45 99999999999999987 2345566778
Q ss_pred cccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCc
Q 046226 282 KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGR 361 (434)
Q Consensus 282 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 361 (434)
|...+.++.++ ++++++|+.||.|++||++.......+ .....|...|.++++++++|++|+.||.|++||+.++
T Consensus 318 ~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~-- 392 (445)
T 2ovr_B 318 HQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTL-QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG-- 392 (445)
T ss_dssp CCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE-CSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTC--
T ss_pred CcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEE-ccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCC--
Confidence 88888888774 679999999999999999755433322 1223488899999999999999999999999999988
Q ss_pred eeeEEEe-----eccccceeEEEEeecccCCCCCCcccEEEEeecCCe----EEEEecCCC
Q 046226 362 HTMLAVL-----VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGV----LKMWRVTRP 413 (434)
Q Consensus 362 ~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~----v~iw~~~~~ 413 (434)
+.+..+ .+|.+.|++++|+|+ +.+|++|+.||+ |.+||+...
T Consensus 393 -~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 393 -EFIRNLVTLESGGSGGVVWRIRASNT---------KLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp -CEEEEEEECTTGGGTCEEEEEEECSS---------EEEEEEECSSSSSCCEEEEEECCCC
T ss_pred -ceeeeeeccccCCCCceEEEEEecCC---------EEEEEEcccCCCCccEEEEEECCCC
Confidence 555555 478899999999999 899999999998 999999864
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-40 Score=300.75 Aligned_cols=291 Identities=11% Similarity=0.191 Sum_probs=251.3
Q ss_pred ccceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeE
Q 046226 79 SSSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKI 154 (434)
Q Consensus 79 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i 154 (434)
.-.......+.+|.+.|++++| ++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|+ .+++++.||.|
T Consensus 19 ~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 19 QGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp SCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred eccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3345556678999999999999 8999999999999999999999999999999999999999986 89999999999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC-----CcEEEEEcCCCe--
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD-----KTIKVWRIRDSK-- 227 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~-- 227 (434)
++||+.+++....+ .+...|.+++|+|++++|++++.+ |.|++||+....
T Consensus 99 ~iwd~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 99 KLWDVSNGQCVATW-----------------------KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp EEEETTTCCEEEEE-----------------------ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred EEEECCCCcEEEEe-----------------------ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 99999877655554 377889999999999999999998 999999997653
Q ss_pred ---------eEEEcccCcc--CeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC
Q 046226 228 ---------CIETIQAHSE--PINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD 295 (434)
Q Consensus 228 ---------~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 295 (434)
.+..+..|.. .+.+++|+|++ .|++++.||.|++||++ ........+..|...|.+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS-----NNYEYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETT-----TTTEEEEEEECCSSCEEEEEECTTS
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECC-----CCcEeEEEEecCCCceeEEEECCCC
Confidence 3344455655 89999999999 99999999999999987 1134556677788999999999999
Q ss_pred CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCC--------------cEEEEeccCC
Q 046226 296 GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADS--------------TSRVWAREQD 359 (434)
Q Consensus 296 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg--------------~i~iwd~~~~ 359 (434)
++|++++.||.|++||++.......+ .+...+.++.++ ++++++++.++ .+++||+.++
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTLQVLKKY-----ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE-----ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred CEEEEecCCceEEEEECCCCceeeee-----cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 99999999999999999765443332 255677777775 67999999888 8999999987
Q ss_pred CceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 360 GRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 360 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
..+..+.+|...|++++|+|+ +++|++++.||.|++|+++.+.
T Consensus 306 ---~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 306 ---EEIGRVQGHFGPLNTVAISPQ---------GTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp ---CEEEEEECCSSCEEEEEECTT---------SSEEEEEETTSEEEEEEECHHH
T ss_pred ---cchhheecccCcEEEEEECCC---------CCEEEEEcCCCeEEEEECcccc
Confidence 778888999999999999998 8999999999999999998754
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.4e-41 Score=311.25 Aligned_cols=294 Identities=14% Similarity=0.191 Sum_probs=244.2
Q ss_pred eeeeEEEeeccccEEEEEEcCCEEEEEeCCCeEEEecCCCce------eEeeccCCCccEEEEEEeCC---------EEE
Q 046226 82 YRCISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFT------ECGRLKAKTSMVVAMEVSHD---------RVY 146 (434)
Q Consensus 82 ~~~~~~~~~h~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~------~~~~~~~~~~~v~~l~~~~~---------~l~ 146 (434)
..+...+.+|.+.|++++|+.++|++|+.||.|++||+.+++ .+..+..|...|.+++|+++ .|+
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 345667889999999999966999999999999999999887 78888899999999999865 688
Q ss_pred EEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc-----CCCeEEEEEe----cCCCE-EEEEecCC
Q 046226 147 AAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH-----MGPITSIAIN----VSDDT-LYSASLDK 216 (434)
Q Consensus 147 ~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg 216 (434)
+++.||.|++||+...+........ .+..| ...|.+++|+ |++++ |++++.||
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg 148 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFE-----------------KLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG 148 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEE-----------------EECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS
T ss_pred EEcCCCCEEEEEccCCcccccccce-----------------eecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC
Confidence 8899999999999876641111000 01146 5899999999 99999 99999999
Q ss_pred cEEEEEcCC------CeeEE-----Ec-------ccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEE
Q 046226 217 TIKVWRIRD------SKCIE-----TI-------QAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 217 ~i~vwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 278 (434)
.|++||+.+ ++.+. .+ ..|...|.+++|+|++.+++++.||.|++||++ .......
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~------~~~~~~~ 222 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELS------TLRPLYN 222 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETT------TTEEEEE
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECC------CCceeEE
Confidence 999999998 66665 66 448889999999998888899999999999987 2344555
Q ss_pred ecc---c---ccCeEEEEEecCCCEEEEEcCC---CeEEEEEcCcccccccccCcccC-------------cccceEEEE
Q 046226 279 LTA---K---YSPVKTLTLTLDDGLLYGGCTD---GYIHYWHKGWFSAQLQYGGALQG-------------HTHAVMCLA 336 (434)
Q Consensus 279 ~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~-------------~~~~v~~~~ 336 (434)
+.. | ...+.+++|+|++++|++++.| |.|++||++...... .+.+ |...|.+++
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG----SLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE----EECBC--------CCBSBSSCEEEEE
T ss_pred EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc----eeccCcccccccccccccCCcEEEEE
Confidence 666 7 8899999999999999999999 999999987554332 3445 888999999
Q ss_pred ee--CCEEEEecCCCcEEEEeccCCCceeeEEEee------cc---------------ccceeEEEEeecccCCCCCCcc
Q 046226 337 SV--ANYVISGSADSTSRVWAREQDGRHTMLAVLV------GH---------------RGPIRCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 337 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~h---------------~~~v~~~~~~~~~~~~~~~~~~ 393 (434)
|+ +++|++++.||.|++||+.++ +.+..+. +| ...|++++|+|+ +
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~---------g 366 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTK---ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK---------G 366 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT---------T
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCC---ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc---------c
Confidence 96 679999999999999999987 7788888 78 999999999998 5
Q ss_pred ----------cEEEEeecCCeEEEEecCCCC
Q 046226 394 ----------CTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 394 ----------~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.+|++++.||.|++|++.+++
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-40 Score=326.82 Aligned_cols=284 Identities=20% Similarity=0.297 Sum_probs=232.4
Q ss_pred eeeeEEEeeccccEEEEEE---cCCEEEEEeCCCeEEEecCCC-----ceeEeeccCCCccEEEEEEeCC--EEEEEEcC
Q 046226 82 YRCISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPE-----FTECGRLKAKTSMVVAMEVSHD--RVYAAYGD 151 (434)
Q Consensus 82 ~~~~~~~~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d 151 (434)
......+.+|.+.|++++| ++++|+||+.|++|++||+.+ +.....+.+|...|.+++|+++ .|++|+.|
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 4455678999999999999 457999999999999999875 3455678899999999999997 89999999
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 231 (434)
|.|++||+.++.....+ .+|...|.+++|+|++++|++|+.|++|++||+........
T Consensus 452 g~v~vwd~~~~~~~~~~----------------------~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRF----------------------VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp SEEEEEETTTTEEEEEE----------------------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CcEEEEECCCCcceeEE----------------------eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 99999999876544433 26999999999999999999999999999999865543332
Q ss_pred c---ccCccCeEEEEEcCCC---eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC
Q 046226 232 I---QAHSEPINALVVADDG---VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG 305 (434)
Q Consensus 232 ~---~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 305 (434)
. .+|...|.+++|+|++ .+++++.|+.|++||++ .......+.+|...|.+++|+|++++|++|+.||
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~------~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS------NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC------CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 2 4688899999999986 79999999999999987 2345567788999999999999999999999999
Q ss_pred eEEEEEcCcccccccccCcccCcccceEEEEeeC--CEEEEecCCCcEEEEeccCCCceeeEEEeecc------------
Q 046226 306 YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA--NYVISGSADSTSRVWAREQDGRHTMLAVLVGH------------ 371 (434)
Q Consensus 306 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h------------ 371 (434)
.|++||++....... +. +...|.+++|++ .+|+++ .|+.|++||++++ ..+..+..+
T Consensus 584 ~i~iwd~~~~~~~~~----~~-~~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~ 654 (694)
T 3dm0_A 584 VVLLWDLAEGKKLYS----LE-ANSVIHALCFSPNRYWLCAA-TEHGIKIWDLESK---SIVEDLKVDLKAEAEKADNSG 654 (694)
T ss_dssp BCEEEETTTTEEEEC----CB-CSSCEEEEEECSSSSEEEEE-ETTEEEEEETTTT---EEEEEECCCCC----------
T ss_pred eEEEEECCCCceEEE----ec-CCCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCC---CChhhhccccccccccccccc
Confidence 999999976544332 22 345688888874 355555 5677999999987 455444322
Q ss_pred -------ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 372 -------RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 372 -------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
...+++++|+|+ +.+|++|+.||.|++|++.
T Consensus 655 ~~~~~~~~~~~~~l~~spd---------g~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 655 PAATKRKVIYCTSLNWSAD---------GSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------CCCCEEEEEECTT---------SSEEEEEETTSEEEEEEC-
T ss_pred cccCCceeEEeeeEEEcCC---------CCEEEEEcCCCeEEEEecc
Confidence 123788999999 9999999999999999986
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.4e-40 Score=294.79 Aligned_cols=311 Identities=15% Similarity=0.216 Sum_probs=251.8
Q ss_pred cCCCCCCCCCCCCCccCCCCCCCcc-----cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEee
Q 046226 55 TSPLSSPRHPFNPTAAAGSSSPETS-----SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGR 127 (434)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~ 127 (434)
..++.+..++++++.++.+..+..+ ..........+|.+.|++++| ++++|++++ ||.|++||+.+++....
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~ 87 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP 87 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceee
Confidence 3445566667777777655543322 122223344579999999999 889999999 99999999987653322
Q ss_pred ---c--cCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE
Q 046226 128 ---L--KAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 128 ---~--~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 200 (434)
+ ..|...|.+++|+|+ .+++++.||.|++||+...+...... +..|...|.++
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--------------------~~~~~~~i~~~ 147 (337)
T 1gxr_A 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE--------------------LTSSAPACYAL 147 (337)
T ss_dssp SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE--------------------EECSSSCEEEE
T ss_pred eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeee--------------------cccCCCceEEE
Confidence 2 278999999999997 79999999999999998765322211 12588999999
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEe
Q 046226 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 201 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
+|+|++++|++++.||.|++||+++++.+..+..|...|.+++|+|++ .+++++.||.|++||++. .......
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~------~~~~~~~ 221 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE------GRQLQQH 221 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------TEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC------CceEeee
Confidence 999999999999999999999999999999999999999999999999 999999999999999872 1222222
Q ss_pred cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEecc
Q 046226 280 TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 280 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~ 357 (434)
.+...+.+++|+|++++|++++.|+.|++||++.... ..+..|...|.++.|+ +++|++++.||.|++||+.
T Consensus 222 -~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 222 -DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp -ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred -cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 3567899999999999999999999999999875432 2355788899999997 6799999999999999999
Q ss_pred CCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 358 QDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 358 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
++ ..+ ....|...|.+++|+|+ +++|++++.||.|++|++.
T Consensus 296 ~~---~~~-~~~~~~~~v~~~~~s~~---------~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 296 YG---ASI-FQSKESSSVLSCDISVD---------DKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TC---CEE-EEEECSSCEEEEEECTT---------SCEEEEEETTSCEEEEEEE
T ss_pred CC---eEE-EEecCCCcEEEEEECCC---------CCEEEEecCCCeEEEEEEe
Confidence 87 333 33468899999999999 8999999999999999973
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.7e-40 Score=301.11 Aligned_cols=294 Identities=12% Similarity=0.111 Sum_probs=236.0
Q ss_pred cceeeeEEEeeccccEEEEEE--cC-CEEEEEeCCCeEEEecCCCceeEeecc--CCCccEEEEEEeC-C--EEEEEEcC
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GN-GFIYTGSDSNVIRIWKQPEFTECGRLK--AKTSMVVAMEVSH-D--RVYAAYGD 151 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~-~--~l~~~s~d 151 (434)
..+.....+.+|.+.|++++| ++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| + .+++++.|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 457778889999999999999 66 899999999999999999877776665 6999999999999 3 89999999
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 231 (434)
+.|++||+.. .....+.. ...|...|.+++|+|++++|++|+.||.|++||+ +++.+..
T Consensus 141 ~~i~iwd~~~-~~~~~~~~-------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~ 199 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAK-------------------TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFK 199 (383)
T ss_dssp TEEEEEETTS-CEEEEEEC-------------------CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEE
T ss_pred CEEEEEECCC-CceEEEec-------------------cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEE
Confidence 9999999974 22222210 1136688999999999999999999999999999 5788899
Q ss_pred cccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEcCCCeEE
Q 046226 232 IQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTDGYIH 308 (434)
Q Consensus 232 ~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~ 308 (434)
+..|...|.+++|+|++ ++++++.|+.|++||++..... ......+ .|...|.+++|+| ++++|++++.|+.|+
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK--NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99999999999999998 7999999999999999832221 2233333 5889999999999 999999999999999
Q ss_pred EEEcCcccccccccC---cccCccc----------ceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeec--c
Q 046226 309 YWHKGWFSAQLQYGG---ALQGHTH----------AVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVG--H 371 (434)
Q Consensus 309 i~d~~~~~~~~~~~~---~~~~~~~----------~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--h 371 (434)
+||++.......+.. ....|.. .+..+.++ +++ +|+.||.|++||+.++ +.+..+.+ |
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~---~~~~~l~~~~~ 351 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSG---GLVHQLRDPNA 351 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTC---CEEEEECBTTB
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCC---ceeeeecCCCC
Confidence 999976544332211 1111222 23334443 444 7889999999999987 67777776 5
Q ss_pred ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 372 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
...+..++|+|+ +.+|++|+ ||.|++||+++
T Consensus 352 ~~~~~~~~~s~~---------g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 352 AGIISLNKFSPT---------GDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CSCCCEEEECTT---------SSEEEEEE-TTEEEEEECC-
T ss_pred CceEEEEEEecC---------ccEEEEec-CCcEEEEecCC
Confidence 677888899999 89999997 99999999875
No 29
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.1e-41 Score=301.44 Aligned_cols=277 Identities=19% Similarity=0.317 Sum_probs=240.5
Q ss_pred CCCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecC
Q 046226 47 FSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQ 119 (434)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~ 119 (434)
....+.+|...+.+..+++++..+++++.|.+++.|+ ++..+..|.+.|.+++| ++++|++|+.|+.|++||+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 3456789999999999999999999999998887765 57788899999999999 8999999999999999999
Q ss_pred CCc----eeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC
Q 046226 120 PEF----TECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM 194 (434)
Q Consensus 120 ~~~----~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (434)
.+. .....+.+|...|.++.|+++ .+++++.|+.|++||+.+++....+ .+|.
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~----------------------~~h~ 184 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF----------------------TGHT 184 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE----------------------CCCS
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE----------------------cCCC
Confidence 765 455678899999999999886 8999999999999999876544433 2699
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCccee
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLH 273 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~ 273 (434)
..|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++ .|++++.||.|++||++. .
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~------~ 258 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA------D 258 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------T
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC------C
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999872 1
Q ss_pred EEEEEe--cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCC
Q 046226 274 TLILTL--TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADS 349 (434)
Q Consensus 274 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg 349 (434)
.....+ ..+...|.+++|+|++++|++|+.||.|++||+..... ...+.+|...|.+++|+ +.+|++|+.||
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~----~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE----eeEeecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 122222 23345799999999999999999999999999864432 34567899999999996 56999999999
Q ss_pred cEEEEe
Q 046226 350 TSRVWA 355 (434)
Q Consensus 350 ~i~iwd 355 (434)
.|+|||
T Consensus 335 ~i~iWd 340 (340)
T 1got_B 335 FLKIWN 340 (340)
T ss_dssp CEEEEC
T ss_pred cEEecC
Confidence 999997
No 30
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-39 Score=290.39 Aligned_cols=289 Identities=19% Similarity=0.292 Sum_probs=248.6
Q ss_pred cceeeeEEEeeccccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRV 156 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~v 156 (434)
..++++.++.+|.+.|++++| ++++|++|+.||.|++||+.+++....+..|...|.+++|+|+ .+++++.||.|++
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccHHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 356788999999999999999 9999999999999999999999999999999999999999997 8999999999999
Q ss_pred eecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCc
Q 046226 157 WRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS 236 (434)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 236 (434)
|++.......... .+.+|...|.+++| ++++|++++.||.|++|| .++.+..+..|.
T Consensus 86 ~~~~~~~~~~~~~-------------------~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~ 142 (313)
T 3odt_A 86 VPLFATSGEDPLY-------------------TLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHN 142 (313)
T ss_dssp EETTCCTTSCC-C-------------------EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCS
T ss_pred EEeeecCCCCccc-------------------chhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCC
Confidence 9987643222111 11269999999999 578999999999999999 678888899999
Q ss_pred cCeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecc-cccCeEEEEEecCCCEEEEEcCCCeEEEEEcC
Q 046226 237 EPINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 237 ~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 313 (434)
..+.++.+.+ ++ .+++++.||.|++||.. .....+.. +...+.+++|+|++. +++++.||.|++||++
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQND--------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH 213 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEETT--------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEecC--------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC
Confidence 9999999988 56 99999999999999944 23334444 888999999999988 9999999999999987
Q ss_pred cccccccccCcccCcccceEEEEeeCC-EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCc
Q 046226 314 WFSAQLQYGGALQGHTHAVMCLASVAN-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDE 392 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 392 (434)
.... ...+.+|...|.+++++++ .|++++.||.|++||+.++ +.+..+..|...|.+++|+|+
T Consensus 214 ~~~~----~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~--------- 277 (313)
T 3odt_A 214 TGDV----LRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG---SLKQVITLPAISIWSVDCMSN--------- 277 (313)
T ss_dssp TCCE----EEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC---CEEEEEECSSSCEEEEEECTT---------
T ss_pred chhh----hhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCC---ceeEEEeccCceEEEEEEccC---------
Confidence 5433 3345688999999999744 7999999999999999988 778888999999999999998
Q ss_pred ccEEEEeecCCeEEEEecCCCCccc
Q 046226 393 YCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 393 ~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
+. +++++.||.|++|++.+++...
T Consensus 278 ~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 278 GD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp SC-EEEEETTSCEEEEESCGGGCCC
T ss_pred CC-EEEEeCCCcEEEEeCCCCceee
Confidence 66 6779999999999999876543
No 31
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-39 Score=305.07 Aligned_cols=287 Identities=17% Similarity=0.270 Sum_probs=246.4
Q ss_pred eeEEEeecccc-EEEEEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCC
Q 046226 84 CISSVLKKDGQ-ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTW 161 (434)
Q Consensus 84 ~~~~~~~h~~~-v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~ 161 (434)
....+.+|.+. +.|+.+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+++ .+++|+.||.|++||+.+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 45678899887 5788889999999999999999999999999999999999999999987 999999999999999987
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe--cCCCEEEEEecCCcEEEEEcCCCee-----------
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN--VSDDTLYSASLDKTIKVWRIRDSKC----------- 228 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~----------- 228 (434)
++....+ .+|...|.+++|+ +++++|++|+.||.|++||+.+++.
T Consensus 193 ~~~~~~~----------------------~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 193 GCCTHVF----------------------EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp TEEEEEE----------------------CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred CcEEEEE----------------------CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 6544433 2699999999999 4778999999999999999987652
Q ss_pred ------------EEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC
Q 046226 229 ------------IETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD 295 (434)
Q Consensus 229 ------------~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 295 (434)
+..+.+|...+.++. +++ .+++++.|+.|++||++ .......+.+|...|.+++|+|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~------~~~~~~~~~~~~~~v~~~~~~~~~ 322 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVA------QMKCLYILSGHTDRIYSTIYDHER 322 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETT------TTEEEEEECCCSSCEEEEEEETTT
T ss_pred eEeeccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECC------CCcEEEEecCCCCCEEEEEEcCCC
Confidence 556778888888874 445 99999999999999987 344566778899999999999999
Q ss_pred CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccce
Q 046226 296 GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPI 375 (434)
Q Consensus 296 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 375 (434)
+++++|+.||.|++||++... ....+.+|...|.++.+++++|++++.||.|++||+.+.. ..... .|...+
T Consensus 323 ~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~---~~~~~-~~~~~~ 394 (464)
T 3v7d_B 323 KRCISASMDTTIRIWDLENGE----LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYS---RKFSY-HHTNLS 394 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC---EEEEE-ECTTCC
T ss_pred CEEEEEeCCCcEEEEECCCCc----EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCc---eeeee-cCCCCc
Confidence 999999999999999987543 3345668999999999999999999999999999999863 33332 366778
Q ss_pred eEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcccc
Q 046226 376 RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSCG 418 (434)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~~ 418 (434)
..++|+++ +.+|++|+ ||.|++||+.+++.+..
T Consensus 395 ~~~~~~~~---------~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 395 AITTFYVS---------DNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp CEEEEEEC---------SSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred cEEEEEeC---------CCEEEEec-CCeEEEEECCCCcEEeh
Confidence 88999998 88999998 99999999999886643
No 32
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-39 Score=302.79 Aligned_cols=285 Identities=22% Similarity=0.379 Sum_probs=250.2
Q ss_pred eeeeEEEeecccc-EEEEEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecC
Q 046226 82 YRCISSVLKKDGQ-ILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRST 160 (434)
Q Consensus 82 ~~~~~~~~~h~~~-v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~ 160 (434)
.+....+.+|.+. +.|+.+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+++.+++++.||.|++||+.
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred cceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECC
Confidence 3456778999886 588888999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeE
Q 046226 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 240 (434)
+++....+ .+|...|.+++|+ ++.+++|+.||.|++||+.+++.+..+.+|...|.
T Consensus 188 ~~~~~~~~----------------------~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~ 243 (445)
T 2ovr_B 188 TGECIHTL----------------------YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243 (445)
T ss_dssp TTEEEEEE----------------------CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred cCcEEEEE----------------------CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE
Confidence 76544433 2699999999996 67899999999999999999999999999999999
Q ss_pred EEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc
Q 046226 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ 320 (434)
Q Consensus 241 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 320 (434)
++.+. ...+++++.||.|++||++ .......+..|...+.+++| ++.++++++.||.|++||++.....
T Consensus 244 ~~~~~-~~~l~~~~~dg~i~iwd~~------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~-- 312 (445)
T 2ovr_B 244 CVQYD-GRRVVSGAYDFMVKVWDPE------TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI-- 312 (445)
T ss_dssp EEEEC-SSCEEEEETTSCEEEEEGG------GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE--
T ss_pred EEEEC-CCEEEEEcCCCEEEEEECC------CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE--
Confidence 99992 3399999999999999987 34456677789999999999 7899999999999999998754432
Q ss_pred ccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeec---cccceeEEEEeecccCCCCCCcccEEE
Q 046226 321 YGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG---HRGPIRCAIAFLGRFGEETEDEYCTIC 397 (434)
Q Consensus 321 ~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~l~ 397 (434)
..+.+|...+.++.++++++++|+.||.|++||++++ ..+..+.+ |...|++++|+ +.+|+
T Consensus 313 --~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~-----------~~~l~ 376 (445)
T 2ovr_B 313 --HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNKHQSAVTCLQFN-----------KNFVI 376 (445)
T ss_dssp --EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC---CEEEEECSTTSCSSCEEEEEEC-----------SSEEE
T ss_pred --EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC---cEEEEEccCCCCCCCEEEEEEC-----------CCEEE
Confidence 3456888999999999999999999999999999887 66677765 88999999996 45899
Q ss_pred EeecCCeEEEEecCCCCccc
Q 046226 398 TGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 398 s~~~Dg~v~iw~~~~~~~~~ 417 (434)
+|+.||.|++||+.+++...
T Consensus 377 s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 377 TSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEETTSEEEEEETTTCCEEE
T ss_pred EEeCCCeEEEEECCCCceee
Confidence 99999999999999987654
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.3e-41 Score=304.60 Aligned_cols=298 Identities=15% Similarity=0.228 Sum_probs=239.9
Q ss_pred eeeeEEEe-eccccEEEEEEc------CCEEEEEeCCCeEEEecCCCceeEeeccC-----CCccEEEEEEeCC------
Q 046226 82 YRCISSVL-KKDGQILCIAVG------NGFIYTGSDSNVIRIWKQPEFTECGRLKA-----KTSMVVAMEVSHD------ 143 (434)
Q Consensus 82 ~~~~~~~~-~h~~~v~~~~~~------~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~~------ 143 (434)
+++...+. +|.+.|++++|. ...+++++.++.|++||+.+++.+..+.. |...|.+++|+++
T Consensus 7 ~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 7 FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp CEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE
T ss_pred EEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC
Confidence 45544544 799999999993 45677777778999999998777666553 5678999999987
Q ss_pred EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEE
Q 046226 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWR 222 (434)
Q Consensus 144 ~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd 222 (434)
.+++++.||.|++||+.+++.+..+. +|...|.+++|+| ++++|++++.||.|++||
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~----------------------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYV----------------------GHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEE----------------------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeec----------------------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 79999999999999998766554442 6999999999999 899999999999999999
Q ss_pred cCCCeeEEEc---ccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcce----------------------eEEE
Q 046226 223 IRDSKCIETI---QAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQL----------------------HTLI 276 (434)
Q Consensus 223 ~~~~~~~~~~---~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~----------------------~~~~ 276 (434)
+++++.+..+ ..|...|.+++|+|++ +|++++.||.|++||++....... ....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999998888 6899999999999999 999999999999999873211000 0112
Q ss_pred EEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc----------cccCcccCcccceEEEEe--e--CCEE
Q 046226 277 LTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL----------QYGGALQGHTHAVMCLAS--V--ANYV 342 (434)
Q Consensus 277 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------~~~~~~~~~~~~v~~~~~--~--~~~l 342 (434)
.....|...|.+++|+ +++|++++.||.|++||++...... .....+..|...|.++++ + +++|
T Consensus 225 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp EECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred ccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 2334588899999998 7899999999999999987654321 123345567777776665 4 7899
Q ss_pred EEecCCCcEEEEeccCCCcee-eEEEeecc--ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 343 ISGSADSTSRVWAREQDGRHT-MLAVLVGH--RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 343 ~s~~~dg~i~iwd~~~~~~~~-~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
++|+.||.|++||+.++.... ....+.+| ...|++++|+|+ +++|++++.||.|++||+.+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD---------SSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT---------SSEEEEEETTSEEEEEEC--
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC---------CCeEEEEeCCCEEEEEEecC
Confidence 999999999999999874332 55577777 799999999998 89999999999999999863
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=300.86 Aligned_cols=272 Identities=16% Similarity=0.131 Sum_probs=221.8
Q ss_pred ccCCCCCCCCCCCCCccCCCCCCCcccceeee----------------EEEeeccccEEEEEE-cCCEEEEEeCCCeEEE
Q 046226 54 HTSPLSSPRHPFNPTAAAGSSSPETSSSYRCI----------------SSVLKKDGQILCIAV-GNGFIYTGSDSNVIRI 116 (434)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~h~~~v~~~~~-~~~~l~tg~~dg~i~i 116 (434)
+...+.+..+++++..+++++ +.+.+.|+.. .....|...|.+++| .++.|++|+.||+|+|
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~l 107 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVEL 107 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEE
Confidence 344567778889999888776 5556655421 123446778999999 6678999999999999
Q ss_pred ecCCCceeEee----ccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccc
Q 046226 117 WKQPEFTECGR----LKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM 190 (434)
Q Consensus 117 wd~~~~~~~~~----~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (434)
||+.+++.+.. ..+|...|.+++|+|+ .|++|+.|++|++||+.+++.+..+
T Consensus 108 Wd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~---------------------- 165 (344)
T 4gqb_B 108 WELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY---------------------- 165 (344)
T ss_dssp EEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE----------------------
T ss_pred EeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE----------------------
Confidence 99988765443 4589999999999997 8999999999999999877555444
Q ss_pred cCcCCCeEEEEEecCCC-EEEEEecCCcEEEEEcCCCeeEEEccc--CccCeEEEEEcCCC--eEEEEeCCCeEEEEecc
Q 046226 191 MKHMGPITSIAINVSDD-TLYSASLDKTIKVWRIRDSKCIETIQA--HSEPINALVVADDG--VLYSASDDATVRVWRRY 265 (434)
Q Consensus 191 ~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~ 265 (434)
.+|...|.+++|++++. +|++|+.|++|++||+++++.+..+.. +...+.+++|+|++ +|++|+.||.|++||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 26999999999999874 788999999999999999998887753 55679999999865 78899999999999987
Q ss_pred cccCcceeEEEEEecccccCeEEEEEecCC-CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--C-CE
Q 046226 266 FYSENQLHTLILTLTAKYSPVKTLTLTLDD-GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--A-NY 341 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~ 341 (434)
..+.+..+.+|...|.+++|+|++ ++|++|+.|+.|+|||++.... ..+.+|...|.+++|+ + .+
T Consensus 246 ------~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-----~~~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 246 ------STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-----FRSQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp ------C--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-----EEECCCSSCEEEEEECSSSTTE
T ss_pred ------CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-----EEEcCCCCCEEEEEEeCCCCeE
Confidence 334456678899999999999987 5799999999999999875432 2356899999999996 3 37
Q ss_pred EEEecCCCcEEEEeccCC
Q 046226 342 VISGSADSTSRVWAREQD 359 (434)
Q Consensus 342 l~s~~~dg~i~iwd~~~~ 359 (434)
|++|+.|++|++|++.+.
T Consensus 315 las~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEETTSCEEEEECCC-
T ss_pred EEEEcCCCeEEEEECCCC
Confidence 889999999999999874
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.5e-41 Score=314.65 Aligned_cols=301 Identities=14% Similarity=0.107 Sum_probs=225.4
Q ss_pred cccceeeeEEEeeccccEEEEEE---cCCEEEEEeCCCeEEEecCCCcee--EeeccCCCccEEEEEEeC-C--EEEEEE
Q 046226 78 TSSSYRCISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEFTE--CGRLKAKTSMVVAMEVSH-D--RVYAAY 149 (434)
Q Consensus 78 ~~~~~~~~~~~~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~-~--~l~~~s 149 (434)
.+..++......+|...|+||+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|.+|+|+| + .|++++
T Consensus 105 ~~~~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 105 TLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp TTTTTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred cccceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 34556667778889999999999 567999999999999999977653 445678999999999997 3 899999
Q ss_pred cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeE
Q 046226 150 GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCI 229 (434)
Q Consensus 150 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 229 (434)
.||+|++||++.... ..+.. ...+...+.+++|+|++++|++|+.||.|++||++ ++.+
T Consensus 185 ~D~~v~iwd~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~ 243 (435)
T 4e54_B 185 MEGTTRLQDFKGNIL-RVFAS-------------------SDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKEL 243 (435)
T ss_dssp SSSCEEEEETTSCEE-EEEEC-------------------CSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBC
T ss_pred CCCEEEEeeccCCce-eEEec-------------------cCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-ccee
Confidence 999999999865321 11110 01345568899999999999999999999999986 5667
Q ss_pred EEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeE
Q 046226 230 ETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYI 307 (434)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 307 (434)
..+.+|...|.+++|+|++ ++++++.|+.|++||++...... ......+|...|.+++|+|++++|++++.||.|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~---~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA---SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS---CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc---eEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 8889999999999999987 78899999999999998332221 222345688899999999999999999999999
Q ss_pred EEEEcCcccccccccCcccCcc-------------cceEEEEe--eCC-EEEEecCCCcEEEEeccCCCceeeEEEe-ec
Q 046226 308 HYWHKGWFSAQLQYGGALQGHT-------------HAVMCLAS--VAN-YVISGSADSTSRVWAREQDGRHTMLAVL-VG 370 (434)
Q Consensus 308 ~i~d~~~~~~~~~~~~~~~~~~-------------~~v~~~~~--~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~ 370 (434)
++||+...............+. ..+..+.+ ++. .++++..++.|++||..++ ..+..+ .+
T Consensus 321 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---~~~~~l~~~ 397 (435)
T 4e54_B 321 RVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---KMMCQLYDP 397 (435)
T ss_dssp EEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---CEEEEECCS
T ss_pred EEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---cEEEEEeCC
Confidence 9999976544332221111110 11111211 122 2222334568999999987 555554 57
Q ss_pred cccceeEE-EEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 371 HRGPIRCA-IAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 371 h~~~v~~~-~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
|...|.++ +|+|+ |.+|++|+ |+.|+||++++++.
T Consensus 398 ~~~~v~s~~~fspd---------g~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 398 ESSGISSLNEFNPM---------GDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCCCCCCEEEECTT---------SSCEEEEC-SSEEEECCCC----
T ss_pred CCCcEEEEEEECCC---------CCEEEEEc-CCcEEEEECCcCee
Confidence 88889887 69998 88999876 88999999998874
No 36
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.6e-40 Score=298.73 Aligned_cols=291 Identities=10% Similarity=0.046 Sum_probs=223.1
Q ss_pred cccEEEEEE--cCCEEEEEeCC-------CeEEEecCCCcee----------EeeccCCCccEEEEEEeCCEEEEEEc--
Q 046226 92 DGQILCIAV--GNGFIYTGSDS-------NVIRIWKQPEFTE----------CGRLKAKTSMVVAMEVSHDRVYAAYG-- 150 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~d-------g~i~iwd~~~~~~----------~~~~~~~~~~v~~l~~~~~~l~~~s~-- 150 (434)
.-+|+|++| ++++|++|+.| +.|++|++..... ...+..|...|.+++++++.+++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 458999999 89999998754 3699999865321 23467888999999999998888754
Q ss_pred ---------CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE--ecCCcEE
Q 046226 151 ---------DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA--SLDKTIK 219 (434)
Q Consensus 151 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~ 219 (434)
|+.+++|++........... .........+...+.+++|+|||++++++ +.|++|+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~ 160 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLT-------------SVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMR 160 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEE-------------EECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEee-------------eeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEE
Confidence 55666776654332211110 00011122456679999999999998754 4789999
Q ss_pred EEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE
Q 046226 220 VWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL 298 (434)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 298 (434)
+||+++++++..+. |...|.+++|+|++ ++++++.++ +++|+.. ............|...+.+++|+|+++++
T Consensus 161 iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~----~~~~~~~~~~~~~~~~v~~v~fspdg~~l 234 (365)
T 4h5i_A 161 IIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTV----TGSCIARKTDFDKNWSLSKINFIADDTVL 234 (365)
T ss_dssp EEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETT----TCCEEEEECCCCTTEEEEEEEEEETTEEE
T ss_pred EeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEec----cCcceeeeecCCCCCCEEEEEEcCCCCEE
Confidence 99999999998886 77889999999999 777777555 5566544 11222334455678889999999999999
Q ss_pred EEEcCCC----eEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEE-eecc
Q 046226 299 YGGCTDG----YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAV-LVGH 371 (434)
Q Consensus 299 ~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~h 371 (434)
++++.|+ .+++||+............+.+|...|.+++|+ |++|++|+.|+.|+|||++++ +++.. +.+|
T Consensus 235 ~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~---~~~~~~~~gH 311 (365)
T 4h5i_A 235 IAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL---SMSKIFKQAH 311 (365)
T ss_dssp EEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT---EEEEEETTSS
T ss_pred EEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC---cEEEEecCcc
Confidence 9998887 688898765544444445667899999999986 679999999999999999987 77776 4799
Q ss_pred ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 372 RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 372 ~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
..+|++++|+|+ |++|||||.|++|+||+++..
T Consensus 312 ~~~V~~v~fSpd---------g~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 312 SFAITEVTISPD---------STYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSCEEEEEECTT---------SCEEEEEETTSEEEEEECCTT
T ss_pred cCCEEEEEECCC---------CCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999 999999999999999999754
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.8e-40 Score=300.73 Aligned_cols=296 Identities=14% Similarity=0.168 Sum_probs=241.0
Q ss_pred EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCce--eEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCC
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT--ECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTW 161 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~ 161 (434)
+..|.++|++++| ++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|+ .+++++.||.|++||+..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 3459999999999 89999999999999999999887 88889999999999999987 899999999999999976
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee----EEEcccCcc
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC----IETIQAHSE 237 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~ 237 (434)
++...... +..|...|.+++|+|++++|++++.||.|++||++.++. ......|..
T Consensus 84 ~~~~~~~~--------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~ 143 (372)
T 1k8k_C 84 RTWKPTLV--------------------ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS 143 (372)
T ss_dssp TEEEEEEE--------------------CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred CeeeeeEE--------------------eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC
Confidence 54322221 125889999999999999999999999999999988762 333356889
Q ss_pred CeEEEEEcCCC-eEEEEeCCCeEEEEecccccC------------cceeEEEEEecccccCeEEEEEecCCCEEEEEcCC
Q 046226 238 PINALVVADDG-VLYSASDDATVRVWRRYFYSE------------NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD 304 (434)
Q Consensus 238 ~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 304 (434)
.|.+++|+|++ +|++++.||.|++||++.... .........+..|...+.+++|+|++++|++++.|
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC
Confidence 99999999999 999999999999999742110 11234566677889999999999999999999999
Q ss_pred CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccC--CC--------------------
Q 046226 305 GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQ--DG-------------------- 360 (434)
Q Consensus 305 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~--~~-------------------- 360 (434)
|.|++||++.... ...+..|...|.+++|+ +.+|++| .|+.|++|++.+ +.
T Consensus 224 ~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 224 STVCLADADKKMA----VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp TEEEEEEGGGTTE----EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred CEEEEEECCCCce----eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 9999999875433 33456788889999886 4566666 899999999987 31
Q ss_pred ---------ceeeE------EEe-eccccceeEEEEeecccCCCCCCcc---cEEEEeecCCeEEEEecCCCCcc
Q 046226 361 ---------RHTML------AVL-VGHRGPIRCAIAFLGRFGEETEDEY---CTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 361 ---------~~~~~------~~~-~~h~~~v~~~~~~~~~~~~~~~~~~---~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
..... ..+ .+|.+.|++++|.+.. + .+|+||+.||.|++|++.+++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--------g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGG--------KAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEEST--------TTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCC--------CcceeeEEEecCCCceEEEEecChhHh
Confidence 00010 223 4899999999987552 6 89999999999999999876654
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.7e-40 Score=307.20 Aligned_cols=281 Identities=21% Similarity=0.380 Sum_probs=238.0
Q ss_pred eeccccEEEEEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceee
Q 046226 89 LKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHV 168 (434)
Q Consensus 89 ~~h~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 168 (434)
.+|...|+|+++++++|++|+.||.|++||+.+++.+..+.+|...|.+++|.++.+++|+.||.|++||+.+++.+..+
T Consensus 130 ~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 130 SETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred cCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 45778899999999999999999999999999999999999999999999998889999999999999999877655444
Q ss_pred EeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeE---EEcccCccCeEEEEEc
Q 046226 169 KLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCI---ETIQAHSEPINALVVA 245 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~ 245 (434)
.+|...|.+++|+ ++++++|+.||.|++||+.+++.+ ..+.+|...|.++++.
T Consensus 210 ----------------------~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 265 (435)
T 1p22_A 210 ----------------------IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 265 (435)
T ss_dssp ----------------------CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE
T ss_pred ----------------------cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC
Confidence 2699999999996 569999999999999999987655 6778899999999992
Q ss_pred CCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc
Q 046226 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL 325 (434)
Q Consensus 246 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 325 (434)
...+++|+.||.|++||++ .......+..|...+.++.++ ++++++|+.||.|++||++.... ...+
T Consensus 266 -~~~l~s~~~dg~i~vwd~~------~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~----~~~~ 332 (435)
T 1p22_A 266 -DKYIVSASGDRTIKVWNTS------TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVL 332 (435)
T ss_dssp -TTEEEEEETTSEEEEEETT------TCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEE
T ss_pred -CCEEEEEeCCCeEEEEECC------cCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCE----EEEE
Confidence 3399999999999999987 334556677899999999984 68999999999999999875433 3356
Q ss_pred cCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCce------eeEEEeeccccceeEEEEeecccCCCCCCcccEEEEe
Q 046226 326 QGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRH------TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 326 ~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
.+|...|.++++++++|++|+.||.|++||+.++... .++..+.+|.+.|.+++| + +.+|++|
T Consensus 333 ~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~---------~~~l~s~ 401 (435)
T 1p22_A 333 EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D---------EFQIVSS 401 (435)
T ss_dssp CCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C---------SSCEEEC
T ss_pred eCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--C---------CCEEEEE
Confidence 6899999999999999999999999999999765211 178888999999999999 4 6789999
Q ss_pred ecCCeEEEEecCCCCccc
Q 046226 400 SLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~~ 417 (434)
+.||.|++||+.+.....
T Consensus 402 s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 402 SHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp CSSSEEEEEC--------
T ss_pred eCCCEEEEEECCCCCCcc
Confidence 999999999998876544
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-40 Score=307.20 Aligned_cols=330 Identities=14% Similarity=0.120 Sum_probs=267.6
Q ss_pred cccCCCCCCCCCCCCC-ccCCCCCCCcccceee---------------eEEEee----------ccccEEEEEE--cCCE
Q 046226 53 LHTSPLSSPRHPFNPT-AAAGSSSPETSSSYRC---------------ISSVLK----------KDGQILCIAV--GNGF 104 (434)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~----------h~~~v~~~~~--~~~~ 104 (434)
.|...+.+..+.+++. .+++++.+..+..|+. ...+.. |.+.|++++| ++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4458899999999999 9999999988888877 223333 6889999999 8999
Q ss_pred EEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeE
Q 046226 105 IYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRN 182 (434)
Q Consensus 105 l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (434)
|++|+.||.|++|| .+++.+..+..|...|.+++|+|+ .+++++.|+.|++||+..++....+........ .+.
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~- 198 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS--SIN- 198 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc--cee-
Confidence 99999999999999 678888899999999999999987 899999999999999987765544422110000 000
Q ss_pred EEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEE
Q 046226 183 LIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRV 261 (434)
Q Consensus 183 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~i 261 (434)
..........+.+++|++++ .+++++.||.|++||+.+++.+..+..|...|.+++|+|++ +|++++.|+.|++
T Consensus 199 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 199 ----AENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp -----------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ----eccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 00001122338999999874 68889999999999999999999999999999999999999 9999999999999
Q ss_pred EecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--C
Q 046226 262 WRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--A 339 (434)
Q Consensus 262 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 339 (434)
||++. ......+..|...+.+++|+|++ ++++++.||.|++||++.... ...+..|...|.+++++ +
T Consensus 274 ~d~~~------~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 274 WHGGN------GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL----LALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp ECSSS------BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----EEEEECTTCCEEEEEECTTS
T ss_pred EECCC------CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----eEecccCCccEEEEEEcCCC
Confidence 99872 23344556788999999999999 999999999999999875433 23455788899999986 6
Q ss_pred CEEEEecCCCcEEEEeccCCC-----------------ceeeEEEeecccc--ceeEEEEeecccCCCCCCcccEEEEee
Q 046226 340 NYVISGSADSTSRVWAREQDG-----------------RHTMLAVLVGHRG--PIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 340 ~~l~s~~~dg~i~iwd~~~~~-----------------~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
++|++++.||.|++||+.++. ....+..+.+|.. .|++++|+|+ +.+|++++
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~~~ 413 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA---------GNKISVAY 413 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT---------SSEEEEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC---------CceEEEEe
Confidence 799999999999999998762 0117888999977 9999999999 89999999
Q ss_pred cCCeEEEEecC
Q 046226 401 LDGVLKMWRVT 411 (434)
Q Consensus 401 ~Dg~v~iw~~~ 411 (434)
.||.|++|+++
T Consensus 414 ~dg~i~iw~~~ 424 (425)
T 1r5m_A 414 SLQEGSVVAIP 424 (425)
T ss_dssp SSSCCEEEECC
T ss_pred cCceEEEEeec
Confidence 99999999986
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.5e-40 Score=303.87 Aligned_cols=316 Identities=12% Similarity=0.131 Sum_probs=254.1
Q ss_pred CCCCCCCCCCCCccCCCCCCCcccceeeeEE-----EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeecc
Q 046226 57 PLSSPRHPFNPTAAAGSSSPETSSSYRCISS-----VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLK 129 (434)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 129 (434)
......+++++..+++++.+..+..|+.... +..| ..+....+ ++++|++|+.||.|++||+.+++....+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3456677888999999998888777765322 3334 33333344 89999999999999999999999999999
Q ss_pred CCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCC
Q 046226 130 AKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDD 207 (434)
Q Consensus 130 ~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 207 (434)
.|...|.+++|+|+ .|++++.|+.|++||+..++.+..+. +|...|.+++|+|+++
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----------------------~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI----------------------GHRATVTDIAIIDRGR 194 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE----------------------CCSSCEEEEEEETTTT
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc----------------------CCCCcEEEEEEcCCCC
Confidence 99999999999997 89999999999999998776655543 6999999999999999
Q ss_pred EEEEEecCCcEEEEEcCCCeeEEEccc---CccCeEEEE---------------------EcCCC-eEEEEeCCCeEEEE
Q 046226 208 TLYSASLDKTIKVWRIRDSKCIETIQA---HSEPINALV---------------------VADDG-VLYSASDDATVRVW 262 (434)
Q Consensus 208 ~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~~~~---------------------~~~~~-~l~s~~~dg~i~iw 262 (434)
+|++++.||.|++||+++++.+..+.. +...+.+++ |+|++ +|++++.||.|++|
T Consensus 195 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 195 NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 999999999999999999999888875 334455544 56788 99999999999999
Q ss_pred ecccccCcceeEEEEEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCcccccccccCcccC-cccceEEEEee-C
Q 046226 263 RRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFSAQLQYGGALQG-HTHAVMCLASV-A 339 (434)
Q Consensus 263 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~ 339 (434)
|++. ..........|...+.+++|+|++. +|++|+.||.|++||++...... ..+.. |...|.++.+. +
T Consensus 275 d~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~---~~~~~~~~~~v~~~~~~~~ 346 (420)
T 3vl1_A 275 NVFS-----KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV---GEFLINEGTPINNVYFAAG 346 (420)
T ss_dssp ETTT-----CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS---EEEEESTTSCEEEEEEETT
T ss_pred ECCC-----CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch---hhhhccCCCCceEEEeCCC
Confidence 9871 2223333456788999999999998 99999999999999997653322 22333 66778888775 6
Q ss_pred CEEEEecCCCcEEEEeccCCCcee------eEEEeeccccceeEEEEeecccCCCCCCccc---EEEEeecCCeEEEEec
Q 046226 340 NYVISGSADSTSRVWAREQDGRHT------MLAVLVGHRGPIRCAIAFLGRFGEETEDEYC---TICTGSLDGVLKMWRV 410 (434)
Q Consensus 340 ~~l~s~~~dg~i~iwd~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~---~l~s~~~Dg~v~iw~~ 410 (434)
++|++++.||.|++|++....... ....+.+|.+.|.+++|+|+ +. .|++++.+|.+.+|++
T Consensus 347 ~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 347 ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSD---------DESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECC---------SSSSCEEEEEETTTEEEEEES
T ss_pred CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccC---------CCCcceEEEEcCCceEEEEec
Confidence 699999999999999998743221 22346688999999999999 66 6777788999999998
Q ss_pred CC
Q 046226 411 TR 412 (434)
Q Consensus 411 ~~ 412 (434)
++
T Consensus 418 ~~ 419 (420)
T 3vl1_A 418 SN 419 (420)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 41
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-40 Score=305.57 Aligned_cols=318 Identities=14% Similarity=0.237 Sum_probs=241.0
Q ss_pred CCCCCCccCCCCCCCcccceeeeEEE-eeccccEEEEEE---cCCEEEEEeCCCeEEEecCCC---ce---eEeeccCCC
Q 046226 63 HPFNPTAAAGSSSPETSSSYRCISSV-LKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPE---FT---ECGRLKAKT 132 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~---~~---~~~~~~~~~ 132 (434)
+.++...++++. .+ ....+++..+ .+|.+.|++++| ++++|++|+.||+|+|||+.+ +. ....+ .|.
T Consensus 35 f~~~~~~~~~~~-~w-~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~ 111 (437)
T 3gre_A 35 FGPIQEIVRSPN-MG-NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCS 111 (437)
T ss_dssp GCCCCCCCCCCC-GG-GCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECS
T ss_pred cCCccccccccc-cc-cccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCC
Confidence 344444554443 23 2556788888 889999999999 478999999999999999866 32 22222 489
Q ss_pred ccEEEEEEeCC--EEEEEEcCCeEEEeecC---CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEE--EecC
Q 046226 133 SMVVAMEVSHD--RVYAAYGDGKIRVWRST---WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIA--INVS 205 (434)
Q Consensus 133 ~~v~~l~~~~~--~l~~~s~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~ 205 (434)
..|.+++|+|+ .|++++.||.|++||+. .++........ .+..+.... .++...+.++. ++++
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-------~i~~~~~~~---~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-------CIRKINLKN---FGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-------EEEEEEGGG---GSSCCCEEEEEEEECSS
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc-------eeEEEEccC---cccccCceEEEEEEcCC
Confidence 99999999996 89999999999999985 33333222111 111111100 01667788888 5588
Q ss_pred CCEEEEEecCCcEEEEEcCCCeeEEEccc--CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEec-c
Q 046226 206 DDTLYSASLDKTIKVWRIRDSKCIETIQA--HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT-A 281 (434)
Q Consensus 206 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~ 281 (434)
+.+|++|+.||.|++||+++++++..+.. |...|.+++|+|++ +|++|+.||.|++||++ .......+. .
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~------~~~~~~~~~~~ 255 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR------FNVLIRSWSFG 255 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT------TTEEEEEEBCT
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC------CccEEEEEecC
Confidence 99999999999999999999999999988 88999999999999 99999999999999998 233444443 6
Q ss_pred cccCeEEEEEec----CCCEEEEEcCCCeEEEEEcCcccccccccC--------------------cccC--cccceEEE
Q 046226 282 KYSPVKTLTLTL----DDGLLYGGCTDGYIHYWHKGWFSAQLQYGG--------------------ALQG--HTHAVMCL 335 (434)
Q Consensus 282 ~~~~v~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------------~~~~--~~~~v~~~ 335 (434)
|...|.+++|+| ++.+|++|+.||.|++||++.......+.. .+.+ |...|.++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 777899996654 677999999999999999975542222110 1233 78889999
Q ss_pred EeeC-CEEEEecCCCcEEEEeccCCCceeeEEEeec-------------------------------------cccceeE
Q 046226 336 ASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLVG-------------------------------------HRGPIRC 377 (434)
Q Consensus 336 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------------------------------------h~~~v~~ 377 (434)
++++ ++|++|+.||.|++||+.++. ....+.+ |.+.|++
T Consensus 336 ~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 412 (437)
T 3gre_A 336 SVSNDKILLTDEATSSIVMFSLNELS---SSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINS 412 (437)
T ss_dssp EEETTEEEEEEGGGTEEEEEETTCGG---GCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEE
T ss_pred EECCceEEEecCCCCeEEEEECCCcc---cceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceee
Confidence 8874 489999999999999998873 3333332 8999999
Q ss_pred EEEeecccCCCCCCcccEEEEeecCCeEEEEe
Q 046226 378 AIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409 (434)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~ 409 (434)
++|+++. ++.+|++|+.||.|+||+
T Consensus 413 i~~~~~~-------~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 413 ISTCEVD-------ETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEESS-------SSEEEEEEETTSCEEEEC
T ss_pred EeeeccC-------CceEEEEEcCCceEEEeC
Confidence 9999871 167999999999999995
No 42
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=295.00 Aligned_cols=292 Identities=14% Similarity=0.137 Sum_probs=234.5
Q ss_pred eEEEeeccccEEEEEE--cCC-EEEEEeC---CCeEEEecCCCceeEeec-cCCCccEEEEEEeCC-----EEEEEEcCC
Q 046226 85 ISSVLKKDGQILCIAV--GNG-FIYTGSD---SNVIRIWKQPEFTECGRL-KAKTSMVVAMEVSHD-----RVYAAYGDG 152 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~-~l~tg~~---dg~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~-----~l~~~s~dg 152 (434)
...+.+|.+.|.+++| ++. ++++|+. ||.|++||+.+++..... ..|...|.+++|+|+ .+++++.||
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 3456789999999999 564 5566766 999999999987765443 368999999999984 689999999
Q ss_pred eEEEeecCCCC-CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE------ecCCCEEEEEecCCcEEEEEcCC
Q 046226 153 KIRVWRSTWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI------NVSDDTLYSASLDKTIKVWRIRD 225 (434)
Q Consensus 153 ~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~vwd~~~ 225 (434)
.|++||+...+ ....+ .+|...|.+++| +|++++|++++.||.|++||+++
T Consensus 91 ~i~iwd~~~~~~~~~~~----------------------~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSV----------------------KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp CEEEECTTSCSSCSEEE----------------------CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS
T ss_pred eEEEEeCCCCCccEEEE----------------------EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC
Confidence 99999998765 33333 269999999955 67899999999999999999998
Q ss_pred Ce-eEEEcccCcc----CeEEEE----EcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec--
Q 046226 226 SK-CIETIQAHSE----PINALV----VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-- 293 (434)
Q Consensus 226 ~~-~~~~~~~~~~----~v~~~~----~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 293 (434)
++ .+..+..|.+ .+.+++ |++++ ++++++.||.|++||++.. .. .....+...+.+++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------~~-~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM------AL-RWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT------EE-EEEEECSSCEEEEEESCSS
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC------ce-eeecCCCCceEEEEcCCCC
Confidence 86 6777766554 889998 67788 9999999999999998721 11 23355778999999999
Q ss_pred -CCCEEEEEcCCCeEEEEEcCccccccccc-CcccCcccceEEEEeeCC---EEEEecCCCcEEEEeccCCCce------
Q 046226 294 -DDGLLYGGCTDGYIHYWHKGWFSAQLQYG-GALQGHTHAVMCLASVAN---YVISGSADSTSRVWAREQDGRH------ 362 (434)
Q Consensus 294 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~------ 362 (434)
++.+|++++.||.|++||++.......+. ..+.+|...|.+++|+++ +|++++.||.|++||++.+...
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 99999999999999999987543322211 123388999999999754 7999999999999999865432
Q ss_pred ----------eeEEEeeccccceeEEEEeecccCCCCCCcccEEE-EeecCCeEEEEecCCCC
Q 046226 363 ----------TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTIC-TGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 363 ----------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~~Dg~v~iw~~~~~~ 414 (434)
..+..+.+|...|++++|+|+ +.+|+ +++.||.|++|++.+.+
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPD---------KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECC--
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCC---------CCeEEEEecCCCcEEEEECCCcc
Confidence 578889999999999999999 78887 89999999999998764
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=292.46 Aligned_cols=292 Identities=21% Similarity=0.271 Sum_probs=238.7
Q ss_pred CCcccccC-CCCCCCCCCCCCccCCCCCCCcccceeee-------EE-EeeccccEEEEEE--cCCEEEEEeCCCeEEEe
Q 046226 49 SPISLHTS-PLSSPRHPFNPTAAAGSSSPETSSSYRCI-------SS-VLKKDGQILCIAV--GNGFIYTGSDSNVIRIW 117 (434)
Q Consensus 49 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iw 117 (434)
..+.+|.. .+....+++++..+++++.|.+++.|+.. .. ..+|.+.|.+++| ++++|++|+.|++|++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 34556766 77788889999999999999999888652 12 2579999999999 89999999999999999
Q ss_pred cCCCc--eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc
Q 046226 118 KQPEF--TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH 193 (434)
Q Consensus 118 d~~~~--~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
|+... +.+..+.+|...|.+++|+|+ .|++++.|+.|++||+........... +.+|
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------------------~~~h 149 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV-------------------LNSH 149 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE-------------------ECCC
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE-------------------ecCc
Confidence 98765 467788999999999999997 899999999999999976544332211 1269
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCe--eEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCc
Q 046226 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
...|.+++|+|++++|++|+.|+.|++||+++++ +...+.+|...|.+++|+|++ +|++++.|+.|++||.......
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 9999999999999999999999999999998875 457888999999999999999 9999999999999997522211
Q ss_pred ---------ceeEEEEEecc-cccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccc-----cCcccCcccceEEE
Q 046226 271 ---------QLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQY-----GGALQGHTHAVMCL 335 (434)
Q Consensus 271 ---------~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~~~~~v~~~ 335 (434)
........+.+ |...|.+++|++++..|++++.|+.|++|+.......... .....+|...|.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 12233334444 7889999999999999999999999999998654322111 12245899999999
Q ss_pred EeeC---CEEEEecCCCcEEEEeccCC
Q 046226 336 ASVA---NYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 336 ~~~~---~~l~s~~~dg~i~iwd~~~~ 359 (434)
+|++ .+|++|+.||.|++|++.+.
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 9974 48999999999999999886
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-40 Score=303.82 Aligned_cols=297 Identities=12% Similarity=0.102 Sum_probs=227.1
Q ss_pred EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc--eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCC
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF--TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTW 161 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~ 161 (434)
+..|.++|++++| ++++|++|+.|+.|+|||+.++ +.+..+.+|...|.+++|+|+ .|++++.|+.|++||+..
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4457889999999 8999999999999999999988 788889999999999999997 899999999999999987
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCe---eEEEccc-Ccc
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK---CIETIQA-HSE 237 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~-~~~ 237 (434)
+....... .+.+|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |..
T Consensus 87 ~~~~~~~~-------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 147 (377)
T 3dwl_C 87 DGTWKQTL-------------------VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS 147 (377)
T ss_dssp --CCCCEE-------------------ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred CCceeeee-------------------EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence 65111110 123699999999999999999999999999999999877 4677777 999
Q ss_pred CeEEEEEcCCC-eEEEEeCCCeEEEEecccccCc------------ceeEEEEEecccccCeEEEEEecCCCEEEEEcCC
Q 046226 238 PINALVVADDG-VLYSASDDATVRVWRRYFYSEN------------QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD 304 (434)
Q Consensus 238 ~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 304 (434)
.|.+++|+|++ +|++++.|+.|++||++..... ........+ .|...|.+++|+|++++|++++.|
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence 99999999999 9999999999999998521111 134455556 889999999999999999999999
Q ss_pred CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCc---------------------
Q 046226 305 GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGR--------------------- 361 (434)
Q Consensus 305 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~--------------------- 361 (434)
|.|++||++...........+.+|...|.+++|+ +++|++|+.|+.+ +|+....+.
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T 3dwl_C 227 SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNT 305 (377)
T ss_dssp TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSB
T ss_pred CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccc
Confidence 9999999986655433356777899999999886 6688888766665 666542210
Q ss_pred ------eeeE------EEe----------------eccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 362 ------HTML------AVL----------------VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 362 ------~~~~------~~~----------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
...+ ..+ ..|.+.|+++.+.+... .+...|+|||.||.|++||+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~-----~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 306 GEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP-----GNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET-----TEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC-----CceEEEEeecCCCcEEEecC
Confidence 0000 111 13999999999877620 00126999999999999986
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-41 Score=312.89 Aligned_cols=320 Identities=13% Similarity=0.118 Sum_probs=258.3
Q ss_pred CCCCCCCCCCCC-ccCCC----------CCCCcccceeee-------EEEeeccccEEEEEE--cCCEEEEEeCCCeEEE
Q 046226 57 PLSSPRHPFNPT-AAAGS----------SSPETSSSYRCI-------SSVLKKDGQILCIAV--GNGFIYTGSDSNVIRI 116 (434)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~-------~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~i 116 (434)
.+.+..+++++. .++++ +.+..+..|+.. .....|.+.|++++| ++++|++|+.||.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 455556666655 56666 677777777642 112458999999999 8999999999999999
Q ss_pred ecCCC----ceeEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCC------ceeeEeeeccCCCCceeEE
Q 046226 117 WKQPE----FTECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNG------VKHVKLATIPKTGGAVRNL 183 (434)
Q Consensus 117 wd~~~----~~~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~~ 183 (434)
||+.+ .+.+..+..|...|.+++|+|+ .+++++.|+.|++||+...+. ....
T Consensus 94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--------------- 158 (416)
T 2pm9_A 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP--------------- 158 (416)
T ss_dssp ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC---------------
T ss_pred eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc---------------
Confidence 99987 4578889999999999999975 799999999999999987651 1111
Q ss_pred EeccccccCcCCCeEEEEEecC-CCEEEEEecCCcEEEEEcCCCeeEEEcccC------ccCeEEEEEcCCC--eEEEEe
Q 046226 184 IVGKDKMMKHMGPITSIAINVS-DDTLYSASLDKTIKVWRIRDSKCIETIQAH------SEPINALVVADDG--VLYSAS 254 (434)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~--~l~s~~ 254 (434)
.....|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+..+ ...|.+++|+|++ ++++++
T Consensus 159 ----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 159 ----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT 234 (416)
T ss_dssp ----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE
T ss_pred ----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE
Confidence 012368999999999999 789999999999999999999999888876 7899999999997 899999
Q ss_pred CCC---eEEEEecccccCcceeEEEEEec-ccccCeEEEEEec-CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcc
Q 046226 255 DDA---TVRVWRRYFYSENQLHTLILTLT-AKYSPVKTLTLTL-DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHT 329 (434)
Q Consensus 255 ~dg---~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 329 (434)
.|+ .|++||++... .....+. .|...|.+++|+| ++++|++++.||.|++||++.... ...+.+|.
T Consensus 235 ~d~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~----~~~~~~~~ 305 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNAN-----TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ----LSQFPARG 305 (416)
T ss_dssp CCSSSCCCCEEETTSTT-----SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE----EEEEECSS
T ss_pred CCCCCceEEEEeCCCCC-----CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc----ceeecCCC
Confidence 998 99999998221 2233445 7889999999999 999999999999999999875433 33556888
Q ss_pred cceEEEEee--C-CEEEEecCCCcEEEEeccCCCceeeEE--------------------------------Eeeccccc
Q 046226 330 HAVMCLASV--A-NYVISGSADSTSRVWAREQDGRHTMLA--------------------------------VLVGHRGP 374 (434)
Q Consensus 330 ~~v~~~~~~--~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------~~~~h~~~ 374 (434)
..|.+++|+ + .+|++++.||.|++||+.+........ ....|..+
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEP 385 (416)
T ss_dssp SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCC
T ss_pred CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCC
Confidence 899999987 3 699999999999999998764211110 01116778
Q ss_pred eeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 375 IRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 375 v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
+.+++|+|+ |++|++++.||.|+||++.++
T Consensus 386 ~~~~~~s~d---------g~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 386 SPAAHWAFG---------GKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SCCCEEETT---------TEEECBCTTSSCBCCBCCCCC
T ss_pred ccceEEeeC---------CeEEEEeCCCCeEEEEEeccC
Confidence 889999999 999999999999999999865
No 46
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.8e-39 Score=288.06 Aligned_cols=280 Identities=18% Similarity=0.258 Sum_probs=233.8
Q ss_pred CCcccccCCCCCCCCCCC-CCccCCCCCCCcccceee----------eEEEeeccccEEEEEE--cCCEEEEEeCCCeEE
Q 046226 49 SPISLHTSPLSSPRHPFN-PTAAAGSSSPETSSSYRC----------ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIR 115 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~ 115 (434)
..+.+|...+.+..+.++ +..+++++.|.+++.|+. +.++.+|.+.|.+++| ++++|++|+.|++|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 357789999988877664 578999999999988854 5678999999999999 899999999999999
Q ss_pred EecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc
Q 046226 116 IWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH 193 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
+||+.+++.+..+.+|...|.+++|+++ .+++++.|+.|++||+... .+.. +.+|
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~----------------------~~~h 147 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLAT----------------------LLGH 147 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEE----------------------ECCC
T ss_pred EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEE----------------------Eecc
Confidence 9999999999999999999999999997 8999999999999998632 1111 1269
Q ss_pred CCCeEEEEEecC------CCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEeccc
Q 046226 194 MGPITSIAINVS------DDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYF 266 (434)
Q Consensus 194 ~~~v~~~~~~~~------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~ 266 (434)
...|.+++|+|. +..|++++.|+.|++||+++++....+.+|...|.+++|+|++ +|++++.||.|++||+.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~- 226 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA- 226 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT-
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-
Confidence 999999999985 4589999999999999999999999999999999999999999 99999999999999987
Q ss_pred ccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccccc----CcccCcccceEEEEee--CC
Q 046226 267 YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYG----GALQGHTHAVMCLASV--AN 340 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~~~~~v~~~~~~--~~ 340 (434)
.......+.. ...+.+++|+|++.+|++++.+ .+++|++.......... .....|...+.+++|+ |+
T Consensus 227 -----~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 227 -----AKKAMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp -----TTEEEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred -----CCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence 2223334433 4689999999999999988755 59999987543322221 1223456678888885 67
Q ss_pred EEEEecCCCcEEEEeccCC
Q 046226 341 YVISGSADSTSRVWAREQD 359 (434)
Q Consensus 341 ~l~s~~~dg~i~iwd~~~~ 359 (434)
+|++|+.||.|++||+.++
T Consensus 300 ~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 300 TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTSCEEEEEEEEC
T ss_pred EEEEeecCceEEEEEEeec
Confidence 9999999999999998764
No 47
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=297.89 Aligned_cols=301 Identities=15% Similarity=0.184 Sum_probs=238.3
Q ss_pred eeeeEEEeeccccEEEEEE---cCCEEEEEeCCCeEEEecCCCceeEeecc-------------CCCccEEEEEEeC-C-
Q 046226 82 YRCISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEFTECGRLK-------------AKTSMVVAMEVSH-D- 143 (434)
Q Consensus 82 ~~~~~~~~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-------------~~~~~v~~l~~~~-~- 143 (434)
.+....+.+|.+.|++++| ++++|++|+.||.|++||+.+++....+. +|...|.+++|+| +
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 3456677889999999999 68999999999999999998876554442 5999999999998 4
Q ss_pred -EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCEEEEEecCCcEE
Q 046226 144 -RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDTLYSASLDKTIK 219 (434)
Q Consensus 144 -~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~ 219 (434)
.+++++.||.|++||+...+....+ .+...+.++.+++. +.++++++.||.|+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVF-----------------------NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEE-----------------------ECSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceec-----------------------cCCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 7999999999999999876554444 37778999999885 45999999999999
Q ss_pred EEEcCCCeeEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcce----------eEEEEEecccccCeE
Q 046226 220 VWRIRDSKCIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQL----------HTLILTLTAKYSPVK 287 (434)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~v~ 287 (434)
+||+++++.+..+..|...|.+++|+|++ ++++++.||.|++||++....... .........|...|.
T Consensus 170 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (408)
T 4a11_B 170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN 249 (408)
T ss_dssp EEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred EEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence 99999999999999999999999999998 588999999999999973221000 000111246788999
Q ss_pred EEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcc--cceEEEEe-eCCEEEEecCCCcEEEEeccCCCceee
Q 046226 288 TLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHT--HAVMCLAS-VANYVISGSADSTSRVWAREQDGRHTM 364 (434)
Q Consensus 288 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~ 364 (434)
+++|+|++++|++++.||.|++||+................. ........ .+..+++++.|+.|++||+.++ ..
T Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---~~ 326 (408)
T 4a11_B 250 GLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG---EQ 326 (408)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC---CE
T ss_pred EEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC---cc
Confidence 999999999999999999999999986554333221111111 11112222 2456777788999999999987 78
Q ss_pred EEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 365 LAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 365 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
+..+.+|.+.|++++|+|+ +.+|++++.||.|++|++.+++.+.
T Consensus 327 ~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 327 ITMLKGHYKTVDCCVFQSN---------FQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEECCCSSCEEEEEEETT---------TTEEEEEETTSCEEEEEECC-----
T ss_pred eeeeccCCCeEEEEEEcCC---------CCEEEEECCCCeEEEEeCCCCCccC
Confidence 8899999999999999999 8999999999999999999887654
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-39 Score=298.06 Aligned_cols=282 Identities=19% Similarity=0.296 Sum_probs=237.7
Q ss_pred EeeccccEEEEEE--cCC-EEEEEeCCCeEEEecC----CCce------eEeeccC----------CCccEEEEEEeCC-
Q 046226 88 VLKKDGQILCIAV--GNG-FIYTGSDSNVIRIWKQ----PEFT------ECGRLKA----------KTSMVVAMEVSHD- 143 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~-~l~tg~~dg~i~iwd~----~~~~------~~~~~~~----------~~~~v~~l~~~~~- 143 (434)
...|.+.|++++| +++ +|++|+.||.|++||+ .+++ ....+.. |...|.+++|+|+
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 4457799999999 788 9999999999999999 8877 4544444 6889999999997
Q ss_pred -EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEE
Q 046226 144 -RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWR 222 (434)
Q Consensus 144 -~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd 222 (434)
.|++++.||.|++||. .+.....+ ..|...|.+++|+|++++|++++.||.|++||
T Consensus 121 ~~l~~~~~dg~i~i~~~-~~~~~~~~----------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-TGALLNVL----------------------NFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp SEEEEEETTSCEEEEET-TSCEEEEE----------------------CCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CEEEEEeCCCeEEEEeC-CCCeeeec----------------------cCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 8999999999999993 33332222 25999999999999999999999999999999
Q ss_pred cCCCeeEEEcccCccC---------------eEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeE
Q 046226 223 IRDSKCIETIQAHSEP---------------INALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVK 287 (434)
Q Consensus 223 ~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 287 (434)
+.+++.+..+..+... +.++.|++++.+++++.||.|++||+.. ......+..|...|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~------~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE------KTPTGKLIGHHGPIS 251 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC------SSCSEEECCCSSCEE
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC------CceeeeeccCCCceE
Confidence 9999999998887776 9999999999999999999999999872 223345567889999
Q ss_pred EEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-EEEEecCCCcEEEEeccCCCceeeEE
Q 046226 288 TLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-YVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 288 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
+++|+|++++|++++.||.|++||++.... ...+.+|...|.++.|+++ ++++++.|+.|++||+.++ ..+.
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~ 324 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN---TLLA 324 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT---EEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCcc----ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC---cEeE
Confidence 999999999999999999999999875433 2345578889999999754 9999999999999999987 7888
Q ss_pred EeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 367 VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 367 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.+..|...|.+++|+|+ +.+|++++.||.|++|++.+++
T Consensus 325 ~~~~~~~~i~~~~~s~~---------~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 325 LSIVDGVPIFAGRISQD---------GQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEECTTCCEEEEEECTT---------SSEEEEEETTSCEEEEECHHHH
T ss_pred ecccCCccEEEEEEcCC---------CCEEEEEECCCeEEEEECCCCc
Confidence 88999999999999999 8999999999999999998765
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-38 Score=290.65 Aligned_cols=285 Identities=19% Similarity=0.243 Sum_probs=233.1
Q ss_pred eccc--cEEEEEEcCCEEEEEeCCCeEEEecCCCceeEeeccC-CCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCC
Q 046226 90 KKDG--QILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKA-KTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNG 164 (434)
Q Consensus 90 ~h~~--~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~ 164 (434)
+|.+ .+.+++|+++.+++++.|+.|++||+.+++....+.. |...|.+++|+|+ .|++++.||.|++||+..++.
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK 168 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE
Confidence 4544 4666888777788899999999999999988877765 7899999999997 899999999999999987665
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcC-CCeeEEEcccCccCeEEEE
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALV 243 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~ 243 (434)
+..+. +|...|.+++|+ +++|++|+.||.|++||++ ....+..+..|...|.+++
T Consensus 169 ~~~~~----------------------~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 169 LRTMA----------------------GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLA 224 (401)
T ss_dssp EEEEC----------------------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred EEEec----------------------CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEE
Confidence 54442 699999999994 6799999999999999998 5677888899999999999
Q ss_pred EcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCC-EEEEEc--CCCeEEEEEcCcccccc
Q 046226 244 VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGC--TDGYIHYWHKGWFSAQL 319 (434)
Q Consensus 244 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~ 319 (434)
|+|++ +|++++.|+.|++||++ .......+..|...|.+++|+|++. ++++++ .|+.|++||++......
T Consensus 225 ~~~~~~~l~s~~~d~~v~iwd~~------~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 225 WRSDGLQLASGGNDNVVQIWDAR------SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT------CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred EcCCCCEEEEEeCCCeEEEccCC------CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 99999 99999999999999988 2344556678899999999999764 555554 79999999987654333
Q ss_pred cccCcccCcccceEEEEee--CCEEEE--ecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccE
Q 046226 320 QYGGALQGHTHAVMCLASV--ANYVIS--GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCT 395 (434)
Q Consensus 320 ~~~~~~~~~~~~v~~~~~~--~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 395 (434)
.+ .+...|.++.|+ ++++++ |+.||.|++||+.++. ......+.+|...|.+++|+|+ +.+
T Consensus 299 ~~-----~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-~~~~~~~~~h~~~v~~~~~s~d---------g~~ 363 (401)
T 4aez_A 299 TV-----DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-LTKQVDIPAHDTRVLYSALSPD---------GRI 363 (401)
T ss_dssp EE-----ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-EEEEEEEECCSSCCCEEEECTT---------SSE
T ss_pred EE-----eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-ceeEEEecCCCCCEEEEEECCC---------CCE
Confidence 22 345678999886 668887 5689999999998852 2455567899999999999999 899
Q ss_pred EEEeecCCeEEEEecCCCCccccc
Q 046226 396 ICTGSLDGVLKMWRVTRPKSSCGH 419 (434)
Q Consensus 396 l~s~~~Dg~v~iw~~~~~~~~~~~ 419 (434)
|++++.||.|++|++.+++.....
T Consensus 364 l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 364 LSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEECTTSEEEEEECCC-------
T ss_pred EEEEeCCCcEEEEECCCCcccccc
Confidence 999999999999999988765543
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-40 Score=302.23 Aligned_cols=291 Identities=18% Similarity=0.257 Sum_probs=242.9
Q ss_pred CCCCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEec
Q 046226 46 RFSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK 118 (434)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd 118 (434)
.....+.+|...+.+..+.+++..+++++.|.+++.|+ ++.++..|...|.+++| ++++|++|+.|+.|++||
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 34567889999999999999999999999999888775 47788999999999999 899999999999999999
Q ss_pred CCCce-------eEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccc
Q 046226 119 QPEFT-------ECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 119 ~~~~~-------~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
+.+.. ....+.+|.+.|.++.|.|+ .+++|+.|++|++||+.+++.+..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~----------------- 199 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE----------------- 199 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC-----------------
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc-----------------
Confidence 86532 34557889999999999985 6999999999999999887655443110
Q ss_pred cccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEEcC-CCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecc
Q 046226 189 KMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWRIR-DSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRY 265 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~ 265 (434)
...+|...|.+++|++ ++++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++ +|++++.||.|++||++
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 1126999999999987 78999999999999999998 557888899999999999999999 99999999999999998
Q ss_pred cccCcceeEEEEEeccc-------ccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee
Q 046226 266 FYSENQLHTLILTLTAK-------YSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV 338 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 338 (434)
. ......+..+ ...+.+++|+|++++|++|+.||.|++||+........+.....+|...|.+++|+
T Consensus 280 ~------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 280 T------GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS 353 (380)
T ss_dssp T------TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC
T ss_pred C------CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEEC
Confidence 2 1222222222 23489999999999999999999999999876554444434446899999999986
Q ss_pred --CCEEEEecCCCcEEEEeccCC
Q 046226 339 --ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 339 --~~~l~s~~~dg~i~iwd~~~~ 359 (434)
+++|++|+.||.|++|++...
T Consensus 354 ~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 354 SDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCCEEEEeeCCCCEEEEecCCC
Confidence 679999999999999999764
No 51
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-38 Score=283.94 Aligned_cols=263 Identities=21% Similarity=0.261 Sum_probs=209.6
Q ss_pred CCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEE
Q 046226 120 PEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITS 199 (434)
Q Consensus 120 ~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 199 (434)
.+.+.+..+++|...|.+++|+++.|++++.|+.|++||+..+.......+ ...+|...|.+
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~------------------~~~~h~~~v~~ 63 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVL------------------DETAHKKAIRS 63 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEE------------------CTTCCCSCEEE
T ss_pred cccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEE------------------ecCCccCCEEE
Confidence 345677889999999999999999999999999999999875432111100 00139999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEEcCC-------CeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcc
Q 046226 200 IAINVSDDTLYSASLDKTIKVWRIRD-------SKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQ 271 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~ 271 (434)
++|+|++++|++|+.|++|++||++. .+.+..+.+|...|.+++|+|++ +|++|+.|+.|++||++. ...
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~--~~~ 141 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE--SGE 141 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCT--TCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC--CCC
Confidence 99999999999999999999999853 45677888999999999999999 999999999999999851 222
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC----CEEEEecC
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA----NYVISGSA 347 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~s~~~ 347 (434)
.......+.+|...|.+++|+|++.+|++++.|+.|++||+.... ......+.+|...|.+++|++ .+|++|+.
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 219 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD 219 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCSSSSCEEEEEET
T ss_pred CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC
Confidence 334566778899999999999999999999999999999975332 233346779999999999974 38999999
Q ss_pred CCcEEEEeccCCCc-----eeeEEEeec-cccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 348 DSTSRVWAREQDGR-----HTMLAVLVG-HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 348 dg~i~iwd~~~~~~-----~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
|++|++||+..+.. ..+...+.+ |...|.+++|+++ .+|++++.||.|++|++.+++
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~----------~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN----------GLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT----------SCEEEEETTSCEEEEEEETTE
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC----------CEEEEEeCCCEEEEEEcCCCc
Confidence 99999999975421 134445555 9999999999965 489999999999999987663
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.9e-39 Score=290.52 Aligned_cols=280 Identities=20% Similarity=0.258 Sum_probs=238.7
Q ss_pred CCCCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEec
Q 046226 46 RFSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWK 118 (434)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd 118 (434)
.....+.+|...+.+..+.+++..+++++.|.+++.|+ ....+..|...|.+++| ++.+|++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34457889999999999999999999999999988875 56778889999999999 899999999999999998
Q ss_pred CCCc------eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccc
Q 046226 119 QPEF------TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM 190 (434)
Q Consensus 119 ~~~~------~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (434)
+... .....+..|...|.+++|+++ .+++++.|++|++||+.+++.+..+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--------------------- 193 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--------------------- 193 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------------------
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---------------------
Confidence 8543 334556789999999999997 89999999999999998776555442
Q ss_pred cCcCCCeEEEEEec--CCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccc
Q 046226 191 MKHMGPITSIAINV--SDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFY 267 (434)
Q Consensus 191 ~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~ 267 (434)
+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|...|.+++|+|++ .|++++.|+.|++||++..
T Consensus 194 -~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 194 -GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp -CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred -CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 6999999999987 46899999999999999999999999999999999999999999 9999999999999998721
Q ss_pred cCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEe
Q 046226 268 SENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISG 345 (434)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~ 345 (434)
..........+...+.+++|+|++++|++|+.|+.|++||+..... ...+.+|...|.+++|+ +++|++|
T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~----~~~l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 273 ----REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR----VSILFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp ----EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred ----cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce----EEEEECCCCcEEEEEECCCCCEEEEE
Confidence 1111112223345789999999999999999999999999865432 23566899999999996 6699999
Q ss_pred cCCCcEEEEe
Q 046226 346 SADSTSRVWA 355 (434)
Q Consensus 346 ~~dg~i~iwd 355 (434)
+.||.|++|+
T Consensus 345 s~D~~v~vW~ 354 (354)
T 2pbi_B 345 SWDHTLRVWA 354 (354)
T ss_dssp ETTSEEEEEC
T ss_pred cCCCCEEecC
Confidence 9999999996
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-39 Score=294.45 Aligned_cols=275 Identities=13% Similarity=0.106 Sum_probs=217.4
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCCC------ccccee---------eeEEEeeccccEEEEEE-cCCEEEEEeCCCeEE
Q 046226 52 SLHTSPLSSPRHPFNPTAAAGSSSPE------TSSSYR---------CISSVLKKDGQILCIAV-GNGFIYTGSDSNVIR 115 (434)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------~~~~~~~h~~~v~~~~~-~~~~l~tg~~dg~i~ 115 (434)
..|...+.+..++++++.+++++.+. .+..|+ ......+|.+.|++++| ..+.+++++.||+|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~ 118 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVE 118 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEE
Confidence 46888899999999999999988743 222222 13345679999999999 455677788999999
Q ss_pred EecCCCceeEe----eccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEecccc
Q 046226 116 IWKQPEFTECG----RLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDK 189 (434)
Q Consensus 116 iwd~~~~~~~~----~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (434)
|||+.+++... ...+|...|.+++|+|+ .|++++.|+.|++||+.+++.+..+
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~--------------------- 177 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY--------------------- 177 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE---------------------
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE---------------------
Confidence 99998876543 23479999999999997 8999999999999999876554444
Q ss_pred ccCcCCCeEEEEEecCCC-EEEEEecCCcEEEEEcCCCeeEEEcc--cCccCeEEEEEcCCC--eEEEEeCCCeEEEEec
Q 046226 190 MMKHMGPITSIAINVSDD-TLYSASLDKTIKVWRIRDSKCIETIQ--AHSEPINALVVADDG--VLYSASDDATVRVWRR 264 (434)
Q Consensus 190 ~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~ 264 (434)
.+|...|.+++|++++. ++++++.||.|++||+++++++..+. .+...+.+++|+|++ +|++|+.|+.|++||+
T Consensus 178 -~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 178 -NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp -CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred -cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEEC
Confidence 26999999999999875 78999999999999999988766554 467789999999976 7889999999999998
Q ss_pred ccccCcceeEEEEEecccccCeEEEEEecCC-CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee---CC
Q 046226 265 YFYSENQLHTLILTLTAKYSPVKTLTLTLDD-GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV---AN 340 (434)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~ 340 (434)
+. ......+..|...|.+++|+|++ ++|++|+.|+.|+|||++..+.. ...+|...|.+++|+ +.
T Consensus 257 ~~------~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~-----~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 257 KN------PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF-----RDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp SC------GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE-----EECCCSSCEEEEEECSSSTT
T ss_pred CC------CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe-----EECCCCCCEEEEEEeCCCCC
Confidence 72 22345567888999999999987 57999999999999998754332 223799999999986 56
Q ss_pred EEEEecCCCcEEEEeccCC
Q 046226 341 YVISGSADSTSRVWAREQD 359 (434)
Q Consensus 341 ~l~s~~~dg~i~iwd~~~~ 359 (434)
+|++++.||.|++|++...
T Consensus 326 ~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEEETTSCEEEEECC--
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 9999999999999999765
No 54
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-38 Score=334.94 Aligned_cols=327 Identities=16% Similarity=0.237 Sum_probs=277.0
Q ss_pred CcccccCCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc
Q 046226 50 PISLHTSPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF 122 (434)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~ 122 (434)
.+.+|...+.+..+++++..+++++.+.++..| +++.++.+|.+.|.+++| ++++|++|+.||.|+|||+.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 456889999999999999999999988876655 457889999999999999 8999999999999999999999
Q ss_pred eeEeeccCCCccEEEEEEeCC----EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeE
Q 046226 123 TECGRLKAKTSMVVAMEVSHD----RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198 (434)
Q Consensus 123 ~~~~~~~~~~~~v~~l~~~~~----~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 198 (434)
+.+..+.+|...|.+++|+++ .+++++.|+.|++||+.++.....+ .+|...|.
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~----------------------~~h~~~v~ 747 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM----------------------FGHTNSVN 747 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE----------------------CCCSSCEE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee----------------------cCCCCCEE
Confidence 999999999999999999984 7889999999999999877654443 26999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc---------------------------------------------
Q 046226 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ--------------------------------------------- 233 (434)
Q Consensus 199 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--------------------------------------------- 233 (434)
+++|+|++++|++++.||.|++||+.+++....+.
T Consensus 748 ~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~ 827 (1249)
T 3sfz_A 748 HCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIH 827 (1249)
T ss_dssp EEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETT
T ss_pred EEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEec
Confidence 99999999999999999999999998765443321
Q ss_pred ----------cCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc
Q 046226 234 ----------AHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 234 ----------~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 302 (434)
+|...|.+++|+|++ .+++++.||.|++||+. .......+.+|...|.+++|+|++++|++++
T Consensus 828 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~------~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 828 TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID------SRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp TCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT------TTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC------CCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 567789999999999 99999999999999987 3445667788999999999999999999999
Q ss_pred CCCeEEEEEcCcccccccc---------------------------------cCcccCcccceEEEEee--CCEEEEecC
Q 046226 303 TDGYIHYWHKGWFSAQLQY---------------------------------GGALQGHTHAVMCLASV--ANYVISGSA 347 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~~~---------------------------------~~~~~~~~~~v~~~~~~--~~~l~s~~~ 347 (434)
.||.|++||+......... ......+...+.+++++ ++++++|+.
T Consensus 902 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~ 981 (1249)
T 3sfz_A 902 DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDE 981 (1249)
T ss_dssp TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcC
Confidence 9999999997532111000 00001123456777775 679999999
Q ss_pred CCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 348 DSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 348 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
||.|++||+.++ ..+..+.+|...|++++|+|+ +++|++++.||.|++|++.+++..
T Consensus 982 ~g~i~i~d~~~~---~~~~~~~~h~~~v~~l~~s~d---------g~~l~s~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 982 DGAIKIIELPNN---RVFSSGVGHKKAVRHIQFTAD---------GKTLISSSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp TSCCEEEETTTT---SCEEECCCCSSCCCCEEECSS---------SSCEEEECSSSBEEEEETTTTEEE
T ss_pred CCCEEEEEcCCC---ceeeecccCCCceEEEEECCC---------CCEEEEEcCCCEEEEEECCCCceE
Confidence 999999999987 677788899999999999999 899999999999999999887543
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-39 Score=305.04 Aligned_cols=304 Identities=10% Similarity=0.077 Sum_probs=217.0
Q ss_pred CCCccCCCCCCCcccceee---------eEEEeeccccEEEEEE--c------CCEEEEEeCCCeEEEecCCCcee----
Q 046226 66 NPTAAAGSSSPETSSSYRC---------ISSVLKKDGQILCIAV--G------NGFIYTGSDSNVIRIWKQPEFTE---- 124 (434)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~---------~~~~~~h~~~v~~~~~--~------~~~l~tg~~dg~i~iwd~~~~~~---- 124 (434)
+...+++++.|.+++.|+. ..++.+|.+.|.+++| + +++||+|+.||+|+|||+.++..
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 3445677788888888764 1346678899999999 3 46999999999999999976532
Q ss_pred -------EeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCC
Q 046226 125 -------CGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGP 196 (434)
Q Consensus 125 -------~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (434)
...+.+|...|.+++|+++ .|++|+.||+|++||+.++...... +.+|...
T Consensus 252 ~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~---------------------~~~H~~~ 310 (524)
T 2j04_B 252 FKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFY---------------------DQVHDSY 310 (524)
T ss_dssp EECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEE---------------------EECSSSC
T ss_pred ceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEE---------------------eeccccc
Confidence 2367789999999999876 8999999999999999865322111 1269999
Q ss_pred eEEE--EEecCC-CEEEEEecCCcEEEEEcCCCeeEEEcccCcc--CeEEEEEcCCC-eEEEEeCCCeEEEEecccccCc
Q 046226 197 ITSI--AINVSD-DTLYSASLDKTIKVWRIRDSKCIETIQAHSE--PINALVVADDG-VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 197 v~~~--~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
|.+| +|++++ .+|++|+.|++|++||+++++++..+.+|.. .|.+++|+|++ .+++++.|+.|++||++..
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~--- 387 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA--- 387 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT---
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc---
Confidence 9999 567887 8999999999999999999887777766653 58899999988 8999999999999998821
Q ss_pred ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccC-----cccceEEEEee--CCEEE
Q 046226 271 QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQG-----HTHAVMCLASV--ANYVI 343 (434)
Q Consensus 271 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~~~~v~~~~~~--~~~l~ 343 (434)
.....+.+|...|.+++|+|++++|++|+.||+|++||+... ....... +...+..++++ ++.+
T Consensus 388 ---~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-----~~~~~~~~~~~~~~~~v~~v~~sp~g~~~- 458 (524)
T 2j04_B 388 ---FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-----LLHGIKNSSATQKSLRLWKWDYSIKDDKY- 458 (524)
T ss_dssp ---TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-----TTTCC------CCCCEEEECBCCSSSCEE-
T ss_pred ---ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-----hccccccCccceeeeEEEEeccCCCCCeE-
Confidence 122345579999999999999999999999999999997532 1111111 11245677665 3433
Q ss_pred EecCCCcEEEEecc-CCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 344 SGSADSTSRVWARE-QDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 344 s~~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
.... .+++|+.. ++ .++..+.+|...|.+++|+|+. +.+..+++|+.||.|+||++.-.
T Consensus 459 ~~~~--~~~~~~~~~~g---~~~~~l~gh~~~V~~Vafsp~~------~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 459 RIDS--SYEVYPLTVND---VSKAKIDAHGINITCTKWNETS------AGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EECC--CCCCCC----------------CCCSCCCEEECCST------TTTTEEEEECTTSEEEEEECSCC
T ss_pred EccC--CceecccccCC---cceeeecCCCceEEEEECCCCC------CccHHHHhhccCceEEEEEcccc
Confidence 2222 23344332 22 5777889999999999999982 11349999999999999998743
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-38 Score=278.61 Aligned_cols=253 Identities=18% Similarity=0.228 Sum_probs=207.2
Q ss_pred eeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCC--CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEE
Q 046226 126 GRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDN--GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIA 201 (434)
Q Consensus 126 ~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 201 (434)
..+.+|...|.+++|+++ +|++|+.|++|++||+.... .+.. +.+|.++|.+++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~----------------------l~gH~~~V~~v~ 60 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDT----------------------LTGHEGPVWRVD 60 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEE----------------------ECCCSSCEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEE----------------------EccccCCeEEEE
Confidence 456789999999999997 89999999999999986432 1222 237999999999
Q ss_pred EecC--CCEEEEEecCCcEEEEEcCCCe--eEEEcccCccCeEEEEEcCC--C-eEEEEeCCCeEEEEecccccCcceeE
Q 046226 202 INVS--DDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALVVADD--G-VLYSASDDATVRVWRRYFYSENQLHT 274 (434)
Q Consensus 202 ~~~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 274 (434)
|+++ +++|++|+.|++|++||+++++ .+..+..|...|.+++|+|+ + +|++++.|+.|++||++.... .
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--~-- 136 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--T-- 136 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--B--
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--e--
Confidence 9863 8999999999999999998874 56677889999999999997 6 999999999999999872211 1
Q ss_pred EEEEecccccCeEEEEEecC-------------CCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC--
Q 046226 275 LILTLTAKYSPVKTLTLTLD-------------DGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA-- 339 (434)
Q Consensus 275 ~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 339 (434)
....+.+|...|.+++|+|+ +++|++|+.|+.|++||++...........+.+|...|.+++|++
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 12345678899999999996 579999999999999998755433334456779999999999974
Q ss_pred ---CEEEEecCCCcEEEEeccCCCceeeEEEe--eccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 340 ---NYVISGSADSTSRVWAREQDGRHTMLAVL--VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 340 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
.+|++++.|++|+|||++..........+ ..|...|.+++|+|+ +++|++++.||.|++|+....
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEETTSCEEEEEECTT
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCC---------CCEEEEEcCCCcEEEEEECCC
Confidence 58999999999999999875321122233 578899999999999 899999999999999998743
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-38 Score=286.62 Aligned_cols=283 Identities=16% Similarity=0.192 Sum_probs=228.7
Q ss_pred CCcccccCCCCCCCC-----C-CCCCccCCCCCCCcccceee------------eEEEeeccccEEEEEE--cCCEEEEE
Q 046226 49 SPISLHTSPLSSPRH-----P-FNPTAAAGSSSPETSSSYRC------------ISSVLKKDGQILCIAV--GNGFIYTG 108 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~------------~~~~~~h~~~v~~~~~--~~~~l~tg 108 (434)
..+.+|...+.+..+ . .++..+++++.|.+++.|+. ...+.+|.+.|.+++| ++.+|++|
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 456788888877754 3 37888999999999888864 4568899999999999 88999999
Q ss_pred eCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEec
Q 046226 109 SDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVG 186 (434)
Q Consensus 109 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
+.|++|++||+.+++.+..+.+|...|.+++|+|+ .+++++.|+.|++||+.... ....
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~------------------ 155 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSS------------------ 155 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEEC------------------
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeee------------------
Confidence 99999999999999999999999999999999997 89999999999999986321 1100
Q ss_pred cccccCcCCCeEEEEEecCC----------CEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeC
Q 046226 187 KDKMMKHMGPITSIAINVSD----------DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASD 255 (434)
Q Consensus 187 ~~~~~~~~~~v~~~~~~~~~----------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~ 255 (434)
....+|...|.+++|+|++ .+|++++.||.|++|| ...+....+.+|...|.+++|+|++ +|++|+.
T Consensus 156 -~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 156 -AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp -CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred -ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcC
Confidence 0112588999999999986 7899999999999999 4567778889999999999999999 9999999
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc--ccc-------Cccc
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL--QYG-------GALQ 326 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~-------~~~~ 326 (434)
||.|++||+.... ... ..+ .+...|.+++|+|++.+++++ .|+.|++||+....... .+. ....
T Consensus 234 dg~v~iwd~~~~~--~~~---~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T 2xzm_R 234 DKKLLIWDILNLT--YPQ---REF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQK 306 (343)
T ss_dssp TCEEEEEESSCCS--SCS---EEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBC
T ss_pred CCeEEEEECCCCc--ccc---eee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhc
Confidence 9999999985211 111 111 234579999999999887655 57889999987543322 111 1123
Q ss_pred CcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 327 GHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 327 ~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
+|...|.+++|+ +++|++|+.||.|++|+++++
T Consensus 307 ~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 307 GKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 688889999986 679999999999999998764
No 58
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-37 Score=302.12 Aligned_cols=331 Identities=13% Similarity=0.110 Sum_probs=262.6
Q ss_pred CCCCCcccccCC-CCCCCCCC--CCCccCCCCCCCcccceee-------------eEEEeeccccEEEEEE--cCCEEEE
Q 046226 46 RFSSPISLHTSP-LSSPRHPF--NPTAAAGSSSPETSSSYRC-------------ISSVLKKDGQILCIAV--GNGFIYT 107 (434)
Q Consensus 46 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~h~~~v~~~~~--~~~~l~t 107 (434)
+....+.+|... +.+..+.+ ++..+++++.+..+..|+. +..+..|.+.|.+++| ++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 455677889988 99999999 9999999999988777665 3456779999999999 8999999
Q ss_pred EeCC----CeEEEecCCCceeEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCce
Q 046226 108 GSDS----NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV 180 (434)
Q Consensus 108 g~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 180 (434)
++.+ +.|++|| .++.+..+..|...|.+++|+|+ .+++++.|+.|++||+...+....+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~------------ 199 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD------------ 199 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE------------
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee------------
Confidence 9988 7999998 56788889999999999999997 6999999999999998765444333
Q ss_pred eEEEeccccccCcCC---CeEEEEEecC-CCEEEEEecCCcEEEEEcCCCeeEEEc-c---cCccCeEEEEEcCCC-eEE
Q 046226 181 RNLIVGKDKMMKHMG---PITSIAINVS-DDTLYSASLDKTIKVWRIRDSKCIETI-Q---AHSEPINALVVADDG-VLY 251 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~-~l~ 251 (434)
.+|.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..+ . .|...|.+++|+ ++ +|+
T Consensus 200 ----------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~ 268 (615)
T 1pgu_A 200 ----------RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFA 268 (615)
T ss_dssp ----------CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEE
T ss_pred ----------cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEE
Confidence 25888 9999999999 999999999999999999999999999 6 899999999999 77 999
Q ss_pred EEeCCCeEEEEecccccCcc---------------------------------------eeEEEEEecccccCeEEEEEe
Q 046226 252 SASDDATVRVWRRYFYSENQ---------------------------------------LHTLILTLTAKYSPVKTLTLT 292 (434)
Q Consensus 252 s~~~dg~i~iwd~~~~~~~~---------------------------------------~~~~~~~~~~~~~~v~~~~~~ 292 (434)
+++.|+.|++||++...... .......+..|...|.+++|
T Consensus 269 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~- 347 (615)
T 1pgu_A 269 TVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV- 347 (615)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-
Confidence 99999999999986221000 01222333344444444433
Q ss_pred c---------------------------------CCCEEEEEcCCCeEEEEEcCcccc----------------------
Q 046226 293 L---------------------------------DDGLLYGGCTDGYIHYWHKGWFSA---------------------- 317 (434)
Q Consensus 293 ~---------------------------------~~~~l~~~~~dg~i~i~d~~~~~~---------------------- 317 (434)
| ++..|++++.|+.|++||+.....
T Consensus 348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 427 (615)
T 1pgu_A 348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 427 (615)
T ss_dssp TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence 2 244555555555555555432100
Q ss_pred ------------------------------------------------ccccc-CcccCcccceEEEEee--CCEEEEec
Q 046226 318 ------------------------------------------------QLQYG-GALQGHTHAVMCLASV--ANYVISGS 346 (434)
Q Consensus 318 ------------------------------------------------~~~~~-~~~~~~~~~v~~~~~~--~~~l~s~~ 346 (434)
..... ..+.+|...|.+++|+ +++|++++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 507 (615)
T 1pgu_A 428 DLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 507 (615)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcC
Confidence 00000 3456788899999995 67999999
Q ss_pred CCCcEEEEeccCCCceeeEEEeec-cccceeEEEEee----------cccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 347 ADSTSRVWAREQDGRHTMLAVLVG-HRGPIRCAIAFL----------GRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 347 ~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~----------~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.||.|++||+.++ +.+..+.+ |...|++++|+| + +.+|++++.||.|++|++.++.
T Consensus 508 ~dg~i~iw~~~~~---~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~---------~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 508 VMGKILLYDLQSR---EVKTSRWAFRTSKINAISWKPAEKGANEEEIE---------EDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp TTSCEEEEETTTT---EEEECCSCCCSSCEEEEEECCCC------CCS---------CCEEEEEETTSCEEEEESSCTT
T ss_pred CCCeEEEeeCCCC---cceeEeecCCCCceeEEEEcCccccccccccC---------CCEEEEEcCCCcEEEEECCCCc
Confidence 9999999999987 77788888 999999999999 7 8999999999999999999873
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-37 Score=274.34 Aligned_cols=260 Identities=15% Similarity=0.158 Sum_probs=209.8
Q ss_pred eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCC--ceeEeeccCCCccEEEEEEeC----CEEEEEEcCCeEEE
Q 046226 85 ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPE--FTECGRLKAKTSMVVAMEVSH----DRVYAAYGDGKIRV 156 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~l~~~~----~~l~~~s~dg~i~v 156 (434)
+..+.+|.+.|++++| +|++||+|+.|++|+|||+.+ .+.+..+.+|...|.+++|++ +.|++++.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3457789999999999 899999999999999999874 467788999999999999974 38999999999999
Q ss_pred eecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCCe--eEEEc
Q 046226 157 WRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDSK--CIETI 232 (434)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~ 232 (434)
||+..+....... +.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+
T Consensus 82 Wd~~~~~~~~~~~--------------------~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 82 WKEENGRWSQIAV--------------------HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp EEBSSSCBCCCEE--------------------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred EEcCCCceEEEEE--------------------eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 9997653211111 1258999999999997 8899999999999999998763 24567
Q ss_pred ccCccCeEEEEEcCC-------------C-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC---
Q 046226 233 QAHSEPINALVVADD-------------G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD--- 295 (434)
Q Consensus 233 ~~~~~~v~~~~~~~~-------------~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--- 295 (434)
.+|...|.+++|+|+ + +|++|+.|+.|++||++ ...........+.+|...|.+++|+|++
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~--~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~ 219 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc--CCCceEEEEEEecCCCCceEEEEECCCCCCc
Confidence 789999999999986 3 89999999999999987 2233344566788999999999999984
Q ss_pred CEEEEEcCCCeEEEEEcCccccccc-ccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 296 GLLYGGCTDGYIHYWHKGWFSAQLQ-YGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 296 ~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
.+|++++.|+.|++||++....... .......|...|.+++|+ +++|++++.||.|++|+....+.+.++.
T Consensus 220 ~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~ 293 (297)
T 2pm7_B 220 SYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 293 (297)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC-
T ss_pred eEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEecc
Confidence 8999999999999999875322111 111124677889999886 6799999999999999987554444443
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-38 Score=289.19 Aligned_cols=279 Identities=20% Similarity=0.339 Sum_probs=231.1
Q ss_pred cccCCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeecc------------------ccEEEEEE--cCCEEEE
Q 046226 53 LHTSPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKD------------------GQILCIAV--GNGFIYT 107 (434)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~------------------~~v~~~~~--~~~~l~t 107 (434)
.|...+.+..+++++..+++++ +..+..| +.+..+..|. ..|.+++| ++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5889999999999999998876 4444433 4455565543 24999999 8999999
Q ss_pred EeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEe
Q 046226 108 GSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIV 185 (434)
Q Consensus 108 g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
|+.|+.|+|||+.+++.+..+.+|...|.+++|+|+ .|++++.|+.|++||+.+++....+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----------------- 203 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----------------- 203 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-----------------
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-----------------
Confidence 999999999999999999999999999999999997 8999999999999999876544333
Q ss_pred ccccccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEc-------ccCccCeEEEEEcCCC-eEEEEeCC
Q 046226 186 GKDKMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETI-------QAHSEPINALVVADDG-VLYSASDD 256 (434)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~-~l~s~~~d 256 (434)
.+...+.+++|+| ++++|++|+.||.|++||+++++.+..+ .+|...|.+++|+|++ +|++++.|
T Consensus 204 ------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 204 ------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp ------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 3667899999999 8999999999999999999999887776 5789999999999999 99999999
Q ss_pred CeEEEEecccccCc------ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCccc
Q 046226 257 ATVRVWRRYFYSEN------QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTH 330 (434)
Q Consensus 257 g~i~iwd~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 330 (434)
+.|++||++..... ........+.+|...|.+++|++++.+|++|+.||.|++||+..... ...+.+|..
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~----~~~l~~h~~ 353 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP----LLMLQGHRN 353 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE----EEEEECCSS
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE----EEEECCCCC
Confidence 99999998732211 11233456678999999999999999999999999999999875433 235678999
Q ss_pred ceEEEEee--------CCEEEEecCCCcEEEEeccCC
Q 046226 331 AVMCLASV--------ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 331 ~v~~~~~~--------~~~l~s~~~dg~i~iwd~~~~ 359 (434)
.|.++++. +++|++|+.||.|+||++...
T Consensus 354 ~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 354 SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 99999985 458999999999999998753
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-39 Score=296.55 Aligned_cols=286 Identities=13% Similarity=0.200 Sum_probs=234.8
Q ss_pred ccccEEEEEE--cCC-EEEEE----------eCCCeEEEecCCCce---eEeeccCCCccEEEEEEeCC--EEEEEEcCC
Q 046226 91 KDGQILCIAV--GNG-FIYTG----------SDSNVIRIWKQPEFT---ECGRLKAKTSMVVAMEVSHD--RVYAAYGDG 152 (434)
Q Consensus 91 h~~~v~~~~~--~~~-~l~tg----------~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg 152 (434)
+...|.+++| +++ +|++| +.|+.|+|||+.++. .+..+ .|...|.+++|+|+ .|++++.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 4456888999 665 99999 899999999998875 33333 58899999999997 899999999
Q ss_pred eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC-CCEEEEEecCCcEEEEEcCCCe----
Q 046226 153 KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS-DDTLYSASLDKTIKVWRIRDSK---- 227 (434)
Q Consensus 153 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~---- 227 (434)
.|++||+......... +. .+.+|...|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 90 ~v~vw~~~~~~~~~~~-----------~~-------~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 90 SLELYSTNEANNAINS-----------MA-------RFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp CEEEECCSSTTSCCCE-----------EE-------ECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred eEEEeecccccccccc-----------hh-------hccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc
Confidence 9999999762111000 00 12369999999999998 8999999999999999999876
Q ss_pred --eEE---EcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccccCcceeEEEEEeccc------ccCeEEEEEecC
Q 046226 228 --CIE---TIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAK------YSPVKTLTLTLD 294 (434)
Q Consensus 228 --~~~---~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~ 294 (434)
... .+..|...|.+++|+|+ + ++++++.|+.|++||++ .......+..+ ...+.+++|+|+
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK------AKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT------TTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC------CCCcceEEeccccccccCCceEEEEECCC
Confidence 333 34678999999999998 4 89999999999999987 22334444444 788999999998
Q ss_pred C-CEEEEEcCCC---eEEEEEcCcccccccccCccc-CcccceEEEEee---CCEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 295 D-GLLYGGCTDG---YIHYWHKGWFSAQLQYGGALQ-GHTHAVMCLASV---ANYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 295 ~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
+ .++++++.|+ .|++||++.... ....+. +|...|.+++|+ +++|++++.||.|++||++++ +.+.
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---~~~~ 299 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNANT---PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---EQLS 299 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTTS---CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC---CEEE
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCCC---CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC---ccce
Confidence 7 6899999998 999999975432 233455 789999999985 569999999999999999987 7888
Q ss_pred EeeccccceeEEEEeecccCCCCCCcc-cEEEEeecCCeEEEEecCCCCcc
Q 046226 367 VLVGHRGPIRCAIAFLGRFGEETEDEY-CTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 367 ~~~~h~~~v~~~~~~~~~~~~~~~~~~-~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.+.+|...|.+++|+|+ + .+|++++.||.|++|++.+.+..
T Consensus 300 ~~~~~~~~v~~~~~s~~---------~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPE---------APDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECSSSCCCCEEECTT---------CTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eecCCCCceEEEEECCC---------CCCEEEEEecCCcEEEEEccCCCCC
Confidence 89999999999999998 6 89999999999999999987653
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-37 Score=288.29 Aligned_cols=279 Identities=18% Similarity=0.235 Sum_probs=227.9
Q ss_pred ccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeec--cCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCcee
Q 046226 93 GQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRL--KAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKH 167 (434)
Q Consensus 93 ~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~ 167 (434)
-.+.+|+| .+++|++|. |++|+|||..+++....+ ..|...|++|+|+|+ .|++|+.||.|++||+.+++.+..
T Consensus 106 ~y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 106 YYLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TTCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 45788999 677888876 899999999999877655 467888999999997 899999999999999987765544
Q ss_pred eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-eeEEEcccCccCeEEEEEcC
Q 046226 168 VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVAD 246 (434)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~ 246 (434)
+ .+|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.+++
T Consensus 185 ~----------------------~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 185 M----------------------TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp E----------------------CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred E----------------------eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 4 2699999988875 789999999999999998764 56678889999999999999
Q ss_pred CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCC-EEEE--EcCCCeEEEEEcCccccccccc
Q 046226 247 DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYG--GCTDGYIHYWHKGWFSAQLQYG 322 (434)
Q Consensus 247 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~ 322 (434)
++ .+++++.|+.+++||.... ............|...|.+++|+|.+. ++++ |+.|+.|++||+.+......
T Consensus 241 ~g~~l~s~~~D~~v~i~~~~~~--~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~-- 316 (420)
T 4gga_A 241 DGRHLASGGNDNLVNVWPSAPG--EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-- 316 (420)
T ss_dssp TSSEEEEEETTSCEEEEESSCC--SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE--
T ss_pred CCCeeeeeeccccceEEeeccc--cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee--
Confidence 99 9999999999999998732 222233455677889999999999654 4544 46799999999876544332
Q ss_pred CcccCcccceEEEEee--CCEEEEe--cCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEE
Q 046226 323 GALQGHTHAVMCLASV--ANYVISG--SADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICT 398 (434)
Q Consensus 323 ~~~~~~~~~v~~~~~~--~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s 398 (434)
+..| ..+.++.+. ++.++++ +.|+.|+|||+.++ +++..+.+|.+.|++++|+|+ |.+|+|
T Consensus 317 --~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~---~~v~~l~gH~~~V~~l~~spd---------g~~l~S 381 (420)
T 4gga_A 317 --VDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSLTMSPD---------GATVAS 381 (420)
T ss_dssp --EECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEEEECTT---------SSCEEE
T ss_pred --eccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCC---------CCEEEE
Confidence 2233 456677665 5566554 47999999999987 788999999999999999999 899999
Q ss_pred eecCCeEEEEecCCCCc
Q 046226 399 GSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 399 ~~~Dg~v~iw~~~~~~~ 415 (434)
|+.||+|+|||+.+..+
T Consensus 382 ~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 382 AAADETLRLWRCFELDP 398 (420)
T ss_dssp EETTTEEEEECCSCSSC
T ss_pred EecCCeEEEEECCCCCc
Confidence 99999999999986543
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.6e-37 Score=291.28 Aligned_cols=329 Identities=18% Similarity=0.303 Sum_probs=259.3
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE-cCCEEEEEeCCCeEEEecCCC
Q 046226 48 SSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV-GNGFIYTGSDSNVIRIWKQPE 121 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~ 121 (434)
...+.+|...+... ..+++..+++++.+.+++.|+ ++..+.+|.+.|++++| .+.+|++|+.||+|++||+.+
T Consensus 114 ~~~l~~h~~~v~~~-~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 114 RTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEEECCSSSCEEE-EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred eEEEcCCCCCcEEE-EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 34567777665322 233567889999888876654 68889999999999999 555999999999999999999
Q ss_pred ceeEeeccCCCccEEEEEEeC--C--EEEEEEcCCeEEEeecCCCCCceeeEeee-------ccCCCCceeEEEeccccc
Q 046226 122 FTECGRLKAKTSMVVAMEVSH--D--RVYAAYGDGKIRVWRSTWDNGVKHVKLAT-------IPKTGGAVRNLIVGKDKM 190 (434)
Q Consensus 122 ~~~~~~~~~~~~~v~~l~~~~--~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 190 (434)
++.+..+.+|...|.+++|++ + .+++++.||.|++||+............. .+....... ..+
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 266 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV------GVL 266 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE------EEE
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE------EEc
Confidence 999999999999999999984 3 79999999999999998765443221100 000000000 123
Q ss_pred cCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccC
Q 046226 191 MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSE 269 (434)
Q Consensus 191 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~ 269 (434)
.+|...|.++ +++++++++|+.||.|++||+.+++++..+.+|...|.+++|+|++ .+++++.||.|++||++
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~---- 340 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE---- 340 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT----
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC----
Confidence 4688888887 5679999999999999999999999999999999999999999998 99999999999999987
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCC
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADS 349 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg 349 (434)
.......+.+|...|.+++++ +.+|++++.||.|++||++........ ...+...+.++..+++++++|+ ||
T Consensus 341 --~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 341 --NGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp --TTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE---ECTTCCCEEEEEECSSEEEEEE-TT
T ss_pred --CCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee---cCCCCccEEEEEeCCCEEEEec-CC
Confidence 345667788899999999997 589999999999999999765433322 1233445567777889999998 89
Q ss_pred cEEEEeccCCCceeeEEE-eeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 350 TSRVWAREQDGRHTMLAV-LVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 350 ~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
.|++||++++ +.+.. +.+|.+.|.+++|+. ..++++++.||.+.+|-+
T Consensus 413 ~i~iwd~~~g---~~~~~~~~~~~~~v~~v~~~~----------~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 413 QFNIYNLRSG---KLVHANILKDADQIWSVNFKG----------KTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEEETTTC---CEEESCTTTTCSEEEEEEEET----------TEEEEEEEETTEEEEEEE
T ss_pred eEEEEECCCC---cEEehhhccCCCcEEEEEecC----------CEEEEEEEeCCeEEEEEe
Confidence 9999999998 56654 678899999999973 457777778887766644
No 64
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-38 Score=316.31 Aligned_cols=341 Identities=10% Similarity=0.051 Sum_probs=258.8
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCCCcccceeee----EEEeeccccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEe
Q 046226 52 SLHTSPLSSPRHPFNPTAAAGSSSPETSSSYRCI----SSVLKKDGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECG 126 (434)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~ 126 (434)
.+|...+.+..+.+++..+++++.+.+++.|... .....|.+.|.+++| .+++|++++.|++|+|||+.+++.+.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEE
Confidence 4677888899999999999999999988877531 223458889999999 67799999999999999999999888
Q ss_pred eccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec
Q 046226 127 RLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV 204 (434)
Q Consensus 127 ~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 204 (434)
.+. |...|++++|+|+ .+++|+.||.|++||+...... .+.+.... .......+|.+.|.+++|+|
T Consensus 94 ~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~----------~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 94 TVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQ----------KSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHH----------HHHTCSSSCCCCCCEEEEET
T ss_pred EEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecccc----------ccccccccCCCCeEEEEEcc
Confidence 886 6688999999997 8999999999999999865432 11110000 00012246999999999999
Q ss_pred C-CCEEEEEecCCcEEEEEcCCCeeEEEcccC------------------ccCeEEEEEcCCC-eEEEEeCCCeEEEEec
Q 046226 205 S-DDTLYSASLDKTIKVWRIRDSKCIETIQAH------------------SEPINALVVADDG-VLYSASDDATVRVWRR 264 (434)
Q Consensus 205 ~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~ 264 (434)
+ +..|++|+.||.| +||+++++++..+..| ...|.+++|+|++ +|++++.||.|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 5789999999999 9999999988888765 4779999999999 9999999999999998
Q ss_pred ccccC-------------------------c-ce-------------eEEEE--------------Eec-----------
Q 046226 265 YFYSE-------------------------N-QL-------------HTLIL--------------TLT----------- 280 (434)
Q Consensus 265 ~~~~~-------------------------~-~~-------------~~~~~--------------~~~----------- 280 (434)
+.... . .. ...+. .+.
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 52110 0 00 00000 000
Q ss_pred -------------------c-----------------------------------------------------------c
Q 046226 281 -------------------A-----------------------------------------------------------K 282 (434)
Q Consensus 281 -------------------~-----------------------------------------------------------~ 282 (434)
. |
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 0 0
Q ss_pred ccCeEEE----------------------------------EEecCCCEEEEEcCCCeEEEEEcCccccccc--ccCcc-
Q 046226 283 YSPVKTL----------------------------------TLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ--YGGAL- 325 (434)
Q Consensus 283 ~~~v~~~----------------------------------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~- 325 (434)
...|+++ +|+|++++|++|+.|++|++||+........ +...+
T Consensus 401 ~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~ 480 (902)
T 2oaj_A 401 RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLS 480 (902)
T ss_dssp TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHH
T ss_pred CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeech
Confidence 0112222 2356778899999999999999875532110 00001
Q ss_pred ----cCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCc--------------------------------------
Q 046226 326 ----QGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGR-------------------------------------- 361 (434)
Q Consensus 326 ----~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~-------------------------------------- 361 (434)
.+|...|.+++|+ +++||+|+.||+|+|||+.++..
T Consensus 481 ~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (902)
T 2oaj_A 481 RTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTG 560 (902)
T ss_dssp HHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTT
T ss_pred hhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCC
Confidence 2788899999987 67999999999999999986521
Q ss_pred ----eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 362 ----HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 362 ----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
.+++..+.+|.+.|++++|+|+ | +||+|+.||+|++||++.+..
T Consensus 561 ~~~g~~~~~~l~~h~~~V~svafSpd---------G-~lAsgs~D~tv~lwd~~~~~~ 608 (902)
T 2oaj_A 561 VRQGFMPSTAVHANKGKTSAINNSNI---------G-FVGIAYAAGSLMLIDRRGPAI 608 (902)
T ss_dssp CSEEEEEEEEECCCSCSEEEEEECBT---------S-EEEEEETTSEEEEEETTTTEE
T ss_pred CCCccceeEEEEcCCCcEEEEEecCC---------c-EEEEEeCCCcEEEEECCCCeE
Confidence 1357788899999999999999 9 999999999999999887654
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-38 Score=295.27 Aligned_cols=276 Identities=18% Similarity=0.205 Sum_probs=222.9
Q ss_pred EEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEe
Q 046226 95 ILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 95 v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~ 170 (434)
+++++| ++++|++|+.||.|++||+.+++....+..| ..+....|+++ .|++++.||.|++||+..+.....+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-- 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID-- 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET--
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec--
Confidence 346777 8999999999999999999988877777666 33444466765 8999999999999998755433222
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-e
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-V 249 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 249 (434)
.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ +
T Consensus 136 --------------------~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 136 --------------------QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp --------------------TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred --------------------ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 2699999999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEEeCCCeEEEEecccccCcceeEEEEEec---ccc---------------------cCeEEEEEecCCCEEEEEcCCC
Q 046226 250 LYSASDDATVRVWRRYFYSENQLHTLILTLT---AKY---------------------SPVKTLTLTLDDGLLYGGCTDG 305 (434)
Q Consensus 250 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~---------------------~~v~~~~~~~~~~~l~~~~~dg 305 (434)
|++++.|+.|++||++. ......+. .+. ..+.+++|+|++++|++|+.||
T Consensus 196 l~s~~~d~~v~iwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 269 (420)
T 3vl1_A 196 VLSASLDGTIRLWECGT------GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG 269 (420)
T ss_dssp EEEEETTSCEEEEETTT------TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS
T ss_pred EEEEcCCCcEEEeECCC------CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC
Confidence 99999999999999872 22223332 233 3444555678899999999999
Q ss_pred eEEEEEcCcccccccccCcccCcccceEEEEeeC--C-EEEEecCCCcEEEEeccCCCceeeEEEeec-cccceeEEEEe
Q 046226 306 YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA--N-YVISGSADSTSRVWAREQDGRHTMLAVLVG-HRGPIRCAIAF 381 (434)
Q Consensus 306 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~ 381 (434)
.|++||++........ ...|...|.+++|++ . +|++|+.||.|++||++++. .++..+.+ |...|.++.+
T Consensus 270 ~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~- 343 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQL---PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE--CPVGEFLINEGTPINNVYF- 343 (420)
T ss_dssp CEEEEETTTCCEEEEE---CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEEESTTSCEEEEEE-
T ss_pred eEEEEECCCCceeEEc---ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc--CchhhhhccCCCCceEEEe-
Confidence 9999999765443332 346788999999974 4 99999999999999999863 33555655 6677887755
Q ss_pred ecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 382 LGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 382 ~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
++ +.+|++++.||.|++|++..+.
T Consensus 344 ~~---------~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 344 AA---------GALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp ET---------TEEEEEETTTEEEEEEEECCTT
T ss_pred CC---------CCEEEEecCCccEEEEeccCCC
Confidence 45 7799999999999999998753
No 66
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.1e-38 Score=280.38 Aligned_cols=262 Identities=16% Similarity=0.144 Sum_probs=206.3
Q ss_pred EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCce--eEeeccCCCccEEEEEEeC----CEEEEEEcCCeEEEeec
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT--ECGRLKAKTSMVVAMEVSH----DRVYAAYGDGKIRVWRS 159 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~----~~l~~~s~dg~i~vwd~ 159 (434)
+.+|.+.|++++| +|++|++|+.|++|+|||+.++. .+..+.+|...|.+++|++ +.|++++.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 5689999999999 89999999999999999998764 4677899999999999974 38999999999999998
Q ss_pred CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCCe---eEEEccc
Q 046226 160 TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDSK---CIETIQA 234 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~ 234 (434)
..+....... +.+|...|.+++|+|+ +.+|++|+.|+.|++||++.+. ....+.+
T Consensus 89 ~~~~~~~~~~--------------------~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~ 148 (316)
T 3bg1_A 89 ENGTWEKSHE--------------------HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA 148 (316)
T ss_dssp SSSCCCEEEE--------------------ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred CCCcceEEEE--------------------ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence 7653221111 1269999999999998 7899999999999999998763 2456678
Q ss_pred CccCeEEEEEcCC-----------------C-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC-
Q 046226 235 HSEPINALVVADD-----------------G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD- 295 (434)
Q Consensus 235 ~~~~v~~~~~~~~-----------------~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 295 (434)
|...|.+++|+|+ + +|++|+.|+.|++||++ ..........+.+|...|.+++|+|++
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~---~~~~~~~~~~l~~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE---EDGQWKEEQKLEAHSDWVRDVAWAPSIG 225 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC---TTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC---CCCccceeeecccCCCceEEEEecCCCC
Confidence 9999999999987 3 79999999999999986 122234556778899999999999986
Q ss_pred ---CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeec
Q 046226 296 ---GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVG 370 (434)
Q Consensus 296 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 370 (434)
.+|++++.||+|++||++...........+..|...|.+++|+ +++|++++.|+.|++|+....+...++..+..
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 8899999999999999875321111112345678899999987 66999999999999999875555556655554
Q ss_pred cc
Q 046226 371 HR 372 (434)
Q Consensus 371 h~ 372 (434)
..
T Consensus 306 ~~ 307 (316)
T 3bg1_A 306 GQ 307 (316)
T ss_dssp --
T ss_pred CC
Confidence 43
No 67
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=272.59 Aligned_cols=276 Identities=17% Similarity=0.225 Sum_probs=223.3
Q ss_pred EEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeec--cCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 95 ILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRL--KAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 95 v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
+.+|+| .+++||+|. |++|+|||+.+++.+..+ ..|...|.+++|+|+ .+++|+.||.|++||+.+++.+..+.
T Consensus 28 ~~~l~WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 567899 566787765 899999999999887765 467888999999997 89999999999999998776555442
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-eeEEEcccCccCeEEEEEcCCC
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSEPINALVVADDG 248 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~ 248 (434)
+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+.++.+.+++
T Consensus 107 ----------------------~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 107 ----------------------SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp ----------------------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ----------------------CccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 58888877655 5789999999999999998865 5667788899999999999999
Q ss_pred -eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE---EEEcCCCeEEEEEcCcccccccccCc
Q 046226 249 -VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL---YGGCTDGYIHYWHKGWFSAQLQYGGA 324 (434)
Q Consensus 249 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~i~d~~~~~~~~~~~~~ 324 (434)
++++++.|+.|++||++... ...........+...|..+.+++++..+ ++++.++.|++||.+.......
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~---- 236 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA---- 236 (318)
T ss_dssp SEEEEEETTSCEEEEESSCBT--TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE----
T ss_pred CEEEEEecCcceeEEECCCCc--ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc----
Confidence 99999999999999987322 2233344556677899999999976533 4677899999999865443322
Q ss_pred ccCcccceEEEEee--CCEEEE--ecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEee
Q 046226 325 LQGHTHAVMCLASV--ANYVIS--GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 325 ~~~~~~~v~~~~~~--~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
..+...+..+.+. ++.+++ |+.|+.|++||++++ +++..+.+|.+.|++++|+|+ +.+|+|||
T Consensus 237 -~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~---~~~~~l~gH~~~V~~l~~spd---------g~~l~S~s 303 (318)
T 4ggc_A 237 -VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSLTMSPD---------GATVASAA 303 (318)
T ss_dssp -EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEEEECTT---------SSCEEEEE
T ss_pred -ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCC---------CCEEEEEe
Confidence 2344566666665 555544 458999999999988 788899999999999999999 89999999
Q ss_pred cCCeEEEEecCCCC
Q 046226 401 LDGVLKMWRVTRPK 414 (434)
Q Consensus 401 ~Dg~v~iw~~~~~~ 414 (434)
.||+|+|||+.+..
T Consensus 304 ~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 304 ADETLRLWRCFELD 317 (318)
T ss_dssp TTTEEEEECCSCCC
T ss_pred cCCeEEEEECCCCC
Confidence 99999999997654
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.6e-37 Score=300.54 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=261.9
Q ss_pred CCCcccccCCCCCCCCCCCCC-ccCCCCCCCcccce-----eeeEEEeeccc---cEEEEEE--c-CCEEEEEeCCCeEE
Q 046226 48 SSPISLHTSPLSSPRHPFNPT-AAAGSSSPETSSSY-----RCISSVLKKDG---QILCIAV--G-NGFIYTGSDSNVIR 115 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~h~~---~v~~~~~--~-~~~l~tg~~dg~i~ 115 (434)
...+..|...+.+..+.++.. .+++++.+..+..| +++..+.+|.+ .|.+++| + +++|++|+.||.|+
T Consensus 153 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred ceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 345567788888888888877 68888887775554 56788899999 9999999 6 89999999999999
Q ss_pred EecCCCceeEeec-c---CCCccEEEEEEe-CCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccc
Q 046226 116 IWKQPEFTECGRL-K---AKTSMVVAMEVS-HDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKM 190 (434)
Q Consensus 116 iwd~~~~~~~~~~-~---~~~~~v~~l~~~-~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (434)
+||+.+++.+..+ . .|...|.+++|+ ...+++++.|+.|++||+.+++....+....
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------------------ 294 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK------------------ 294 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCT------------------
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC------------------
Confidence 9999999999998 6 899999999997 2289999999999999998766555443210
Q ss_pred cCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEE--------------------------
Q 046226 191 MKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV-------------------------- 244 (434)
Q Consensus 191 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~-------------------------- 244 (434)
..+...+.++.|. +++++++++.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 295 ~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 295 QQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp TCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCS
T ss_pred CcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccC
Confidence 1245678888885 8999999999999999999988888888776666655555
Q ss_pred -------cCCCeEEEEeCCCeEEEEecccccC------------------------------------------------
Q 046226 245 -------ADDGVLYSASDDATVRVWRRYFYSE------------------------------------------------ 269 (434)
Q Consensus 245 -------~~~~~l~s~~~dg~i~iwd~~~~~~------------------------------------------------ 269 (434)
.++..+++++.|+.|++||+.....
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 2223667777777777776542110
Q ss_pred -------------cc-------eeEEE-EEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccC-
Q 046226 270 -------------NQ-------LHTLI-LTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQG- 327 (434)
Q Consensus 270 -------------~~-------~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~- 327 (434)
.. ..... ..+..|...|.+++|+|++++|++++.||.|++||+...... ..+.+
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~ 529 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK----TSRWAF 529 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE----ECCSCC
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce----eEeecC
Confidence 00 00111 445667889999999999999999999999999998754433 23445
Q ss_pred cccceEEEEe------------eCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccE
Q 046226 328 HTHAVMCLAS------------VANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCT 395 (434)
Q Consensus 328 ~~~~v~~~~~------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 395 (434)
|...|.+++| ++++|++++.||.|++||+.++. .++..+.+|...|++++|+|+ +.
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~h~~~v~~l~~s~~---------~~- 597 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM--KIIKALNAHKDGVNNLLWETP---------ST- 597 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT--CCEEETTSSTTCEEEEEEEET---------TE-
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc--eechhhhcCccceEEEEEcCC---------CC-
Confidence 8999999998 45699999999999999998863 567788999999999999999 88
Q ss_pred EEEeecCCeEEEEecCC
Q 046226 396 ICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 396 l~s~~~Dg~v~iw~~~~ 412 (434)
|++++.||.|++|+++.
T Consensus 598 l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 598 LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEEETTSCEEEEEEC-
T ss_pred eEEecCCceEEEEeeec
Confidence 99999999999999875
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-37 Score=279.67 Aligned_cols=282 Identities=11% Similarity=0.067 Sum_probs=233.5
Q ss_pred eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCce---eEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEE
Q 046226 85 ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT---ECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRV 156 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~v 156 (434)
+....+|.+.|++++| ++++|++|+.||.|++||+.++. ....+..|...|.+++|+|+ .+++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 3344579999999999 89999999999999999998766 34555689999999999975 6999999999999
Q ss_pred eec-CCCCCceeeEeeeccCCCCceeEEEeccccccC--cCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC--------
Q 046226 157 WRS-TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK--HMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-------- 225 (434)
Q Consensus 157 wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-------- 225 (434)
||+ ..+.. .. +.+ |...|.+++|+| +++|++++.|+.|++||+++
T Consensus 84 wd~~~~~~~-~~----------------------~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 84 VDLIGSPSF-QA----------------------LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp ECSSSSSSE-EE----------------------CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EEeccCCce-Ee----------------------ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccc
Confidence 998 65532 11 125 999999999999 99999999999999999987
Q ss_pred -CeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEeccc-ccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEc
Q 046226 226 -SKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYF-YSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGC 302 (434)
Q Consensus 226 -~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 302 (434)
++++..+. |...|.+++|++++ +++++.|+.|++||++. .. .........+...+.+++|+| +++++++++
T Consensus 140 ~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 140 KNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCED----DNGTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp EESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTT----CCCEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred cCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCcccc----ccceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 77777776 88999999999887 99999999999999882 11 112233446778999999999 999999999
Q ss_pred CCCeEEEEEcCcc--cccccccCcccCcc---------cceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEee
Q 046226 303 TDGYIHYWHKGWF--SAQLQYGGALQGHT---------HAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 303 ~dg~i~i~d~~~~--~~~~~~~~~~~~~~---------~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
.||.|++||++.. .........+..|. ..|.+++|+ +++|++++.||.|++||+.++ +.+..+.
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~ 290 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR---KKIKNFA 290 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT---EEEEECC
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH---hHhhhhh
Confidence 9999999998765 11122233444554 489999986 679999999999999999987 7888899
Q ss_pred cc-ccceeEEEEeecccCCCCCCcccEEEEeecCCe-EEEEec
Q 046226 370 GH-RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGV-LKMWRV 410 (434)
Q Consensus 370 ~h-~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~-v~iw~~ 410 (434)
+| ...|.+++ |+ +.+|++++.||. .+.|..
T Consensus 291 ~~h~~~v~~~~--~~---------~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 291 KFNEDSVVKIA--CS---------DNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp CCSSSEEEEEE--EC---------SSEEEEEEECTHHHHCSSS
T ss_pred cccCCCceEec--CC---------CCeEEEEecCCcccccccc
Confidence 98 99999999 87 899999999998 666664
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-37 Score=327.43 Aligned_cols=354 Identities=18% Similarity=0.237 Sum_probs=289.1
Q ss_pred CCCCcccccCCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeeccccEEEEEE----cCCEEEEEeCCCeEEEe
Q 046226 47 FSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDGQILCIAV----GNGFIYTGSDSNVIRIW 117 (434)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~----~~~~l~tg~~dg~i~iw 117 (434)
....+.+|...+.+..+++++..+++++.+..+..| +++.++.+|.+.|.+++| ++.++++|+.||.|++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 344566788899999999999999999988776555 568889999999999999 45589999999999999
Q ss_pred cCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeec--------------------cC
Q 046226 118 KQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATI--------------------PK 175 (434)
Q Consensus 118 d~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~--------------------~~ 175 (434)
|+.+++.+..+.+|...|.+++|+|+ .+++++.||.|++||+..+.....+..... ..
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 808 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA 808 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC
Confidence 99999999999999999999999997 899999999999999987755444332110 00
Q ss_pred CCCc--------eeEEEec-----cccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEE
Q 046226 176 TGGA--------VRNLIVG-----KDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINAL 242 (434)
Q Consensus 176 ~~~~--------~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 242 (434)
.+.. +..+... .....+|...|.+++|+|+++++++++.||.|++||+.+++.+..+.+|...|.++
T Consensus 809 dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 809 DGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGV 888 (1249)
T ss_dssp TSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEE
Confidence 0100 0000000 00122688999999999999999999999999999999999999999999999999
Q ss_pred EEcCCC-eEEEEeCCCeEEEEecccccCc---------------------------------------------------
Q 046226 243 VVADDG-VLYSASDDATVRVWRRYFYSEN--------------------------------------------------- 270 (434)
Q Consensus 243 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~--------------------------------------------------- 270 (434)
+|+|++ .+++++.||.|++||+......
T Consensus 889 ~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 968 (1249)
T 3sfz_A 889 MFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCC 968 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEE
Confidence 999999 9999999999999996521000
Q ss_pred ----------------------ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCc
Q 046226 271 ----------------------QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGH 328 (434)
Q Consensus 271 ----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 328 (434)
........+.+|...|.+++|+|++++|++++.||.|++||+...... ....|
T Consensus 969 ~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~-----~~~~~ 1043 (1249)
T 3sfz_A 969 LSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-----FLQAH 1043 (1249)
T ss_dssp ECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE-----CCBCC
T ss_pred EcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE-----EEecC
Confidence 000112234567888999999999999999999999999998754432 24478
Q ss_pred ccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEE
Q 046226 329 THAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKM 407 (434)
Q Consensus 329 ~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~i 407 (434)
...|.++.+.+ ..+++++.||.|++||+.++ .....+.+|.+.|++++|+|+ +.+|++++.||+|++
T Consensus 1044 ~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~v~~~~~s~d---------~~~l~s~s~d~~v~i 1111 (1249)
T 3sfz_A 1044 QETVKDFRLLQDSRLLSWSFDGTVKVWNVITG---RIERDFTCHQGTVLSCAISSD---------ATKFSSTSADKTAKI 1111 (1249)
T ss_dssp SSCEEEEEECSSSEEEEEESSSEEEEEETTTT---CCCEEEECCSSCCCCEEECSS---------SSSCEEECCSSCCCE
T ss_pred CCcEEEEEEcCCCcEEEEECCCcEEEEECCCC---ceeEEEcccCCcEEEEEECCC---------CCEEEEEcCCCcEEE
Confidence 88999999974 58999999999999999988 677888999999999999999 899999999999999
Q ss_pred EecCCCCccc
Q 046226 408 WRVTRPKSSC 417 (434)
Q Consensus 408 w~~~~~~~~~ 417 (434)
||+.+++...
T Consensus 1112 wd~~~~~~~~ 1121 (1249)
T 3sfz_A 1112 WSFDLLSPLH 1121 (1249)
T ss_dssp ECSSSSSCSB
T ss_pred EECCCcceee
Confidence 9999887543
No 71
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.2e-37 Score=277.16 Aligned_cols=284 Identities=16% Similarity=0.180 Sum_probs=238.9
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCce
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVK 166 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~ 166 (434)
|.+.|.+++| +|++++++..++.+.+|+............|...|.+++|+|+ .+++++ ||.|++||+..+....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 6778999999 8999999988888888877776655556689999999999997 667766 9999999998765433
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCe--eEEEcccCccCeEEEEE
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALVV 244 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~ 244 (434)
...... ..+|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|
T Consensus 87 ~~~~~~-----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 87 PVSQLD-----------------CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp CSEEEE-----------------CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred eeeccc-----------------ccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 332111 11588999999999999999999999999999999877 66778889999999999
Q ss_pred cCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccC
Q 046226 245 ADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGG 323 (434)
Q Consensus 245 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 323 (434)
+|++ .+++++.||.|++||++ .......+..|...+.+++|+|++++|++++.||.|++||++........
T Consensus 150 ~~~~~~l~~~~~dg~v~~~d~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-- 221 (337)
T 1gxr_A 150 SPDSKVCFSCCSDGNIAVWDLH------NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-- 221 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETT------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--
T ss_pred CCCCCEEEEEeCCCcEEEEeCC------CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee--
Confidence 9999 99999999999999987 23455667788999999999999999999999999999999765443332
Q ss_pred cccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 324 ALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 324 ~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
.+...+.+++++ +++|++++.|+.|++||+.++. ...+..|...|.+++|+|+ +++|++++.
T Consensus 222 ---~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~ 285 (337)
T 1gxr_A 222 ---DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYC---------GKWFVSTGK 285 (337)
T ss_dssp ---ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----EEEECCCSSCEEEEEECTT---------SSEEEEEET
T ss_pred ---cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----eEEEcCCccceeEEEECCC---------CCEEEEecC
Confidence 356678888885 6699999999999999999862 3467789999999999999 899999999
Q ss_pred CCeEEEEecCCCCcc
Q 046226 402 DGVLKMWRVTRPKSS 416 (434)
Q Consensus 402 Dg~v~iw~~~~~~~~ 416 (434)
||.|++|++.+++..
T Consensus 286 dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 286 DNLLNAWRTPYGASI 300 (337)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCeEE
Confidence 999999999988754
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.1e-37 Score=280.24 Aligned_cols=298 Identities=13% Similarity=0.123 Sum_probs=219.4
Q ss_pred EEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc----eeEeeccCCCccEEEEEEeC---C-EEEEEEcCCeEE
Q 046226 86 SSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF----TECGRLKAKTSMVVAMEVSH---D-RVYAAYGDGKIR 155 (434)
Q Consensus 86 ~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~l~~~~---~-~l~~~s~dg~i~ 155 (434)
..+.+|.+.|++++| ++++|++|+.||.|++||+.++ +....+.+|...|.+++|+| . .|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999 8999999999999999999875 56777889999999999987 2 899999999999
Q ss_pred EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCCeeEEEcc
Q 046226 156 VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDSKCIETIQ 233 (434)
Q Consensus 156 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 233 (434)
+||+..+...... ..... ...+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~---------~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 85 LWEEDPDQEECSG---------RRWNK----LCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp EEEECTTSCTTSS---------CSEEE----EEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred EEecCCCcccccc---------cCcce----eeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccc
Confidence 9999866431100 00000 0012369999999999999 9999999999999999998876554433
Q ss_pred -------------cCccCeEEEEEcCC---C-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC-
Q 046226 234 -------------AHSEPINALVVADD---G-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD- 295 (434)
Q Consensus 234 -------------~~~~~v~~~~~~~~---~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 295 (434)
.|...+.+++|+|+ + .+++++.|+.+.+|+.. .........+.+|...|.+++|+|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~h~~~i~~~~~~p~~~ 227 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK----DGKLHVAAKLPGHKSLIRSISWAPSIG 227 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT----TSCEEEEEECCCCCSCEEEEEECCCSS
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC----CCceeeeeecCCCCcceeEEEECCCCC
Confidence 57789999999997 5 99999999999777755 22334466778899999999999998
Q ss_pred ---CEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEe------eCCEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 296 ---GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS------VANYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 296 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
++|++++.||.|++||++......... .+...+..... .......+.....+.+|+.... ..+.
T Consensus 228 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 300 (351)
T 3f3f_A 228 RWYQLIATGCKDGRIRIFKITEKLSPLASE----ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV---ELLS 300 (351)
T ss_dssp CSSEEEEEEETTSCEEEEEEEECC-------------------------------------------CCSEEE---EEEE
T ss_pred CcceEEEEEcCCCeEEEEeCCCCcCccccC----CcccceeccCCCcccccccccccccccceeeeecccccc---cEEE
Confidence 899999999999999987543322211 11111111111 1222233334455666665554 7888
Q ss_pred EeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 367 VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 367 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.+.+|...|++++|+|+ +++|++++.||.|++|++.+++..
T Consensus 301 ~~~~h~~~v~~~~~s~~---------~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 301 EHDDHNGEVWSVSWNLT---------GTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EECTTSSCEEEEEECSS---------SCCEEEEETTSCEEEEEECTTSCE
T ss_pred EEecccccEEEEEEcCC---------CCEEEEecCCCcEEEEecCcCcch
Confidence 99999999999999999 899999999999999999987654
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-36 Score=270.35 Aligned_cols=253 Identities=22% Similarity=0.356 Sum_probs=214.5
Q ss_pred ceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEE
Q 046226 122 FTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITS 199 (434)
Q Consensus 122 ~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 199 (434)
......+.+|...|.+++|+|+ .+++++.||.|++|++..++....+ .+|...|.+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~----------------------~~h~~~v~~ 70 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI----------------------SGHKLGISD 70 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE----------------------CCCSSCEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh----------------------ccCCCceEE
Confidence 4566778899999999999997 8999999999999998766544333 269999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEE
Q 046226 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 278 (434)
++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++ +|++++.|+.|++||++ .......
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~------~~~~~~~ 144 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------TGKCLKT 144 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT------TCCEEEE
T ss_pred EEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC------CCEEEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999999987 2344566
Q ss_pred ecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEec
Q 046226 279 LTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAR 356 (434)
Q Consensus 279 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~ 356 (434)
+..|..+|.+++|+|++++|++++.||.|++||++........ ...+...+.+++++ +++|++++.||.|++||+
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE---CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE---eccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 7788899999999999999999999999999998755433222 23456678888875 679999999999999999
Q ss_pred cCCCceeeEEEeeccccceeE--EEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 357 EQDGRHTMLAVLVGHRGPIRC--AIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 357 ~~~~~~~~~~~~~~h~~~v~~--~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.++ +++..+.+|...+.+ ..+++.. +.+|++|+.||.|++||+.+++..
T Consensus 222 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 222 SKG---KCLKTYTGHKNEKYCIFANFSVTG--------GKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp TTT---EEEEEECSSCCSSSCCCEEEECSS--------SCEEEECCTTSCEEEEETTTCCEE
T ss_pred CCC---cEEEEEEecCCceEEEEEEEEeCC--------CcEEEEECCCCEEEEEECCCchhh
Confidence 987 778888888776543 3344332 789999999999999999987653
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=279.48 Aligned_cols=304 Identities=17% Similarity=0.185 Sum_probs=241.6
Q ss_pred ccCCCCCCCcccceeeeEEEeeccccEEEEEE--c---CCEEEEEeCCCeEEEecCCC-ceeE-eeccCCCccEEEEEEe
Q 046226 69 AAAGSSSPETSSSYRCISSVLKKDGQILCIAV--G---NGFIYTGSDSNVIRIWKQPE-FTEC-GRLKAKTSMVVAMEVS 141 (434)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~---~~~l~tg~~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~l~~~ 141 (434)
.+......+.....+.+..+.+|.+.|+|++| + |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~ 95 (368)
T 3mmy_A 16 SMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS 95 (368)
T ss_dssp ECC----CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC
T ss_pred cEEEEeccCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC
Confidence 33333334455667778889999999999999 4 58999999999999999987 5444 7788899999999999
Q ss_pred CC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE--ecCCCEEEEEecCCc
Q 046226 142 HD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI--NVSDDTLYSASLDKT 217 (434)
Q Consensus 142 ~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~ 217 (434)
|+ .|++++.||.|++||+..++..... .|...|.+++| ++++++|++++.||.
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 152 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQIA-----------------------QHDAPVKTIHWIKAPNYSCVMTGSWDKT 152 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEE-----------------------ECSSCEEEEEEEECSSCEEEEEEETTSE
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCceeec-----------------------cccCceEEEEEEeCCCCCEEEEccCCCc
Confidence 97 8999999999999999876543322 59999999999 889999999999999
Q ss_pred EEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCE
Q 046226 218 IKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGL 297 (434)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 297 (434)
|++||+++++.+..+..+. .+.++.+.++ .+++++.++.+++||++. . ..........+...+.++++.++...
T Consensus 153 i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPE-RCYCADVIYP-MAVVATAERGLIVYQLEN--Q--PSEFRRIESPLKHQHRCVAIFKDKQN 226 (368)
T ss_dssp EEEECSSCSSCSEEEECSS-CEEEEEEETT-EEEEEEGGGCEEEEECSS--S--CEEEEECCCSCSSCEEEEEEEECTTS
T ss_pred EEEEECCCCcEEEEEecCC-CceEEEecCC-eeEEEeCCCcEEEEEecc--c--cchhhhccccccCCCceEEEcccCCC
Confidence 9999999999888888664 6677777644 788888999999999872 1 12222223334456677777766554
Q ss_pred ----EEEEcCCCeEEEEEcCcccccccccCcccCccc------------ceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 298 ----LYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTH------------AVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 298 ----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
+++++.||.|++||++..... .....+.+|.. .|.+++|+ +++|++++.||.|++||+.++
T Consensus 227 ~~~~~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 227 KPTGFALGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp CEEEEEEEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CCCeEEEecCCCcEEEEecCCCCcc-ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 999999999999999755321 22223445554 79999986 569999999999999999987
Q ss_pred CceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 360 GRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 360 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.++..+.+|...|++++|+|+ +.+|++++.|+..+.|++...+
T Consensus 306 ---~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 306 ---TKLKTSEQLDQPISACCFNHN---------GNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp ---EEEEECCCCSSCEEEEEECTT---------SSCEEEEECCCSTTCGGGCCTT
T ss_pred ---cEEEEecCCCCCceEEEECCC---------CCeEEEEecccccccccccCCC
Confidence 788999999999999999999 9999999999977777765544
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-36 Score=304.61 Aligned_cols=290 Identities=19% Similarity=0.204 Sum_probs=249.0
Q ss_pred eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEee
Q 046226 83 RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWR 158 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd 158 (434)
+..+.+.+|.+.|.+++| ++++|++|+.||.|+|||+.+++.+..+..|...|.+++|+|+ .|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 456788999999999999 8999999999999999999999999999999999999999997 899999999999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-eeEEEcccCcc
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQAHSE 237 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~ 237 (434)
+.+++.+..+. +|...|.+++|+|++++|++++.||.|++||+.++ .....+..|..
T Consensus 84 ~~~~~~~~~~~----------------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 141 (814)
T 3mkq_A 84 YNTGEKVVDFE----------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH 141 (814)
T ss_dssp TTTCCEEEEEE----------------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS
T ss_pred CCCCcEEEEEe----------------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC
Confidence 98776555442 59999999999999999999999999999999887 77788889999
Q ss_pred CeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec--CCCEEEEEcCCCeEEEEEcC
Q 046226 238 PINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL--DDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 238 ~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~ 313 (434)
.|.+++|+| ++ .+++++.||.|++||+... ... ......+...+..++|+| ++.+|++++.||.|++||++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~--~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS--TPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCS--SCS---EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cce---eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 999999999 66 9999999999999998721 111 112233447899999999 99999999999999999986
Q ss_pred cccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCC
Q 046226 314 WFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETED 391 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 391 (434)
.... ...+.+|...|.+++|+ +++|++++.||.|++||+.++ ..+..+..|...+.+++|+|+
T Consensus 217 ~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~-------- 281 (814)
T 3mkq_A 217 TKSC----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLNVGLERSWCIATHPT-------- 281 (814)
T ss_dssp TTEE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---SEEEEECCSSSSEEEEEECTT--------
T ss_pred CCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEeecCCCcEEEEEEccC--------
Confidence 5433 33456788899999886 569999999999999999987 778888899999999999998
Q ss_pred ccc-EEEEeecCCeEEEEecCCCCc
Q 046226 392 EYC-TICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 392 ~~~-~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
+. .+++++.|+.+.+|++..+..
T Consensus 282 -~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 282 -GRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp -CGGGEEEEEETTEEEEEECSCCSC
T ss_pred -CCceEEEEEeCCCEEEEEcCCCCc
Confidence 44 335555678899999876543
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-37 Score=274.24 Aligned_cols=254 Identities=15% Similarity=0.186 Sum_probs=200.6
Q ss_pred eccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec
Q 046226 127 RLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV 204 (434)
Q Consensus 127 ~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 204 (434)
.+.+|...|.+++|+++ +|++|+.|++|++||+..+...... .+.+|...|.+++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~--------------------~l~gH~~~V~~v~~~~ 67 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA--------------------DLRGHEGPVWQVAWAH 67 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEE--------------------EEECCSSCEEEEEECC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEE--------------------EEcCCCccEEEEEeCC
Confidence 35689999999999986 8999999999999998754321111 1237999999999986
Q ss_pred --CCCEEEEEecCCcEEEEEcCCC--eeEEEcccCccCeEEEEEcCC--C-eEEEEeCCCeEEEEecccccCcceeEEEE
Q 046226 205 --SDDTLYSASLDKTIKVWRIRDS--KCIETIQAHSEPINALVVADD--G-VLYSASDDATVRVWRRYFYSENQLHTLIL 277 (434)
Q Consensus 205 --~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 277 (434)
++++|++|+.|++|++||++++ +.+..+.+|...|.+++|+|+ + +|++++.|+.|++||++. ........
T Consensus 68 ~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~---~~~~~~~~ 144 (316)
T 3bg1_A 68 PMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG---EGQWEVKK 144 (316)
T ss_dssp GGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS---SSCEEECC
T ss_pred CCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC---CCCcceee
Confidence 4899999999999999999887 466778889999999999997 5 899999999999999872 11222334
Q ss_pred EecccccCeEEEEEecC-----------------CCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC-
Q 046226 278 TLTAKYSPVKTLTLTLD-----------------DGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA- 339 (434)
Q Consensus 278 ~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 339 (434)
.+..|...+.+++|+|+ +++|++|+.|+.|++||++... .......+.+|...|.+++|++
T Consensus 145 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~ 223 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPS 223 (316)
T ss_dssp BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCC
T ss_pred eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCC
Confidence 55678889999999997 4789999999999999985321 1123346779999999999974
Q ss_pred -----CEEEEecCCCcEEEEeccCCCce-eeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 340 -----NYVISGSADSTSRVWAREQDGRH-TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 340 -----~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
++|++++.|++|++|++.+.... .....+..|.+.|.+++|+|+ +.+|++++.||+|++|+....
T Consensus 224 ~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~---------g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 224 IGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT---------ANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp SSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT---------TCCEEEEESSSCEEEEEECTT
T ss_pred CCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC---------CCEEEEEcCCCeEEEEEECCC
Confidence 58999999999999999863211 122345678999999999999 899999999999999998643
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-36 Score=300.46 Aligned_cols=198 Identities=12% Similarity=0.085 Sum_probs=168.6
Q ss_pred EeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCC
Q 046226 88 VLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNG 164 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~ 164 (434)
..+|.+.|+|++| ++++||+|+.||+|+||+..+.+....+. |...|.+++|+|+ +|++++.|+.|++||+.+++.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcE
Confidence 4689999999999 89999999999999999998877766554 7889999999997 699999999999999987665
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeE-----------EEcc
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCI-----------ETIQ 233 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~ 233 (434)
+..+ .|...|++++|+|++++|++|+.||.|++||+++++.. ..+.
T Consensus 92 ~~~~-----------------------~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 92 LTTV-----------------------FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEE-----------------------ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEE-----------------------cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 4444 26678999999999999999999999999999988754 2346
Q ss_pred cCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecc------------------cccCeEEEEEec
Q 046226 234 AHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTA------------------KYSPVKTLTLTL 293 (434)
Q Consensus 234 ~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~ 293 (434)
+|.+.|.+++|+|++ .+++|+.||.| +||++. ......+.. |...|.+++|+|
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE------NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT------TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC------CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 788999999999974 89999999999 999972 222333333 346799999999
Q ss_pred CCCEEEEEcCCCeEEEEEcCccc
Q 046226 294 DDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 294 ~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
+|++|++|+.||.|++||++..+
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTTCC
T ss_pred CCCEEEEEECCCeEEEEECCCCc
Confidence 99999999999999999997643
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.1e-36 Score=272.30 Aligned_cols=284 Identities=13% Similarity=0.104 Sum_probs=235.7
Q ss_pred cccccCCCCCCCCCCCCCccCCCCCCCccccee-------eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCC
Q 046226 51 ISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-------CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPE 121 (434)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~ 121 (434)
+..|..++.+..+.+++..+++++.+..+..|+ ++..+.+|.+.|.+++| ++++|++|+.||.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 345778889988999999999998888876665 67778899999999999 799999999999999999988
Q ss_pred ceeEee--ccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCe
Q 046226 122 FTECGR--LKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPI 197 (434)
Q Consensus 122 ~~~~~~--~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 197 (434)
++.... +..|...|.+++|+|+ .+++++.|+.|++||+............ ...|...|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~------------------~~~~~~~i 145 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI------------------KKPIRSTV 145 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE------------------CTTCCSCE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee------------------ecccCCCe
Confidence 765443 4678999999999987 8999999999999999876542222111 12588999
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEEc------------------CCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCe
Q 046226 198 TSIAINVSDDTLYSASLDKTIKVWRI------------------RDSKCIETIQAHSEPINALVVADDG-VLYSASDDAT 258 (434)
Q Consensus 198 ~~~~~~~~~~~l~s~~~dg~i~vwd~------------------~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~ 258 (434)
.+++|+|++++|++++.||.|++||+ ..++.+..+..|...|.+++|+|++ +|++++.|+.
T Consensus 146 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 146 LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE
T ss_pred eEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE
Confidence 99999999999999999999999995 4678889999999999999999999 9999999999
Q ss_pred EEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCc--cc--------------------
Q 046226 259 VRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGW--FS-------------------- 316 (434)
Q Consensus 259 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~-------------------- 316 (434)
|++||++ .......+..|...+.+++|+|++.+|++| .|+.|++||++. ..
T Consensus 226 i~i~d~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 226 VCLADAD------KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp EEEEEGG------GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred EEEEECC------CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 9999997 223455667788899999999999988888 899999999876 21
Q ss_pred --------ccccc-------cCcccCcccceEEEEee---C---CEEEEecCCCcEEEEeccCC
Q 046226 317 --------AQLQY-------GGALQGHTHAVMCLASV---A---NYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 317 --------~~~~~-------~~~~~~~~~~v~~~~~~---~---~~l~s~~~dg~i~iwd~~~~ 359 (434)
..... .....+|...|.++++. | ++|++|+.||.|++||+.++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 00000 11224899999999853 4 79999999999999999864
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=282.38 Aligned_cols=298 Identities=13% Similarity=0.145 Sum_probs=217.8
Q ss_pred eccccEEEEEE--cCCEEEEEeCCCeEEEecCCCce-----------eEeeccCCC------------ccEEEEEEeCC-
Q 046226 90 KKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT-----------ECGRLKAKT------------SMVVAMEVSHD- 143 (434)
Q Consensus 90 ~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~l~~~~~- 143 (434)
.|.+.|++++| ++++||+|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 37899999999 89999999999999999998776 577888998 88999999986
Q ss_pred ---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCC-----------ce---------eEEEeccccccCcCCCeEEE
Q 046226 144 ---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGG-----------AV---------RNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 144 ---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-----------~~---------~~~~~~~~~~~~~~~~v~~~ 200 (434)
.+++++.|+.|++||+......... .......+ .+ ...........+|...|.++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEG--YNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEEC--CSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcce--ecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 5999999999999998753321100 00000000 00 00000001124799999999
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCC-CeeEE-------EcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCc
Q 046226 201 AINVSDDTLYSASLDKTIKVWRIRD-SKCIE-------TIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 201 ~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
+|+|++++|++| .|+.|++||+++ ++.+. .+..|...|.+++|+|++ +|++++.||.|++||++....
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~- 261 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL- 261 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS-
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc-
Confidence 999999999999 799999999984 44444 366899999999999986 899999999999999983221
Q ss_pred ceeEEEEEeccccc------------CeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccc-------
Q 046226 271 QLHTLILTLTAKYS------------PVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHA------- 331 (434)
Q Consensus 271 ~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~------- 331 (434)
.......+..+.. .|.+++|+|++++|++++. +.|++||++... .....+.+|...
T Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~---~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 262 -CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN---RPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp -SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS---SCSCCEESCGGGTTTHHHH
T ss_pred -ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc---cccceeecccccccccccc
Confidence 1111234445554 8999999999999999999 999999997522 223344455432
Q ss_pred --------eEEEEe--eCCEEEEecCCCcEEEEeccCCCceeeEEEee--------------------------------
Q 046226 332 --------VMCLAS--VANYVISGSADSTSRVWAREQDGRHTMLAVLV-------------------------------- 369 (434)
Q Consensus 332 --------v~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------------------- 369 (434)
+..++| ++++|++|+.||.|++||+.++.. + .+.
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD---I-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDS 412 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE---E-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGG
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc---e-eeeecccccccccccCCccccccCCcccccccccc
Confidence 122454 577999999999999999998732 2 222
Q ss_pred -ccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 370 -GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 370 -~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
.+...|..++|+|+ +.+||+++.|+ +++|.-
T Consensus 413 ~~~~~~i~~~~~~p~---------~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 413 LDFNKKILHTAWHPK---------ENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCTTSCCCEEEECSS---------SSEEEEECSSC-EEEEEC
T ss_pred cccCCceeEEEECCC---------CCEEEEEecce-eeeecc
Confidence 23456888999999 89999998876 777763
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-36 Score=281.87 Aligned_cols=275 Identities=21% Similarity=0.322 Sum_probs=231.7
Q ss_pred cccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEEcCCEEEEEeCCCeEEEecCCCceeEee
Q 046226 53 LHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR 127 (434)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~ 127 (434)
.|...+.+..+ ++..+++++.+..+..|+ ++..+.+|.+.|.+++|++++|++|+.||.|++||+.+++.+..
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 34444554433 688888888888766654 67889999999999999999999999999999999999999999
Q ss_pred ccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCC
Q 046226 128 LKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDD 207 (434)
Q Consensus 128 ~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 207 (434)
+..|...|.+++|+++.+++++.||.|++||+........... +.+|...|.+++| +++
T Consensus 209 ~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~-------------------~~~~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 209 LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV-------------------LVGHRAAVNVVDF--DDK 267 (435)
T ss_dssp ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEE-------------------ECCCSSCEEEEEE--ETT
T ss_pred EcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeE-------------------ecCCCCcEEEEEe--CCC
Confidence 9999999999999999999999999999999987655432211 1369999999999 688
Q ss_pred EEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeE
Q 046226 208 TLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVK 287 (434)
Q Consensus 208 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 287 (434)
+|++|+.||.|++||+++++.+..+.+|...|.++.+. +..+++|+.||.|++||++ .......+.+|...|.
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~------~~~~~~~~~~h~~~v~ 340 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE------CGACLRVLEGHEELVR 340 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETT------TCCEEEEECCCSSCEE
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECC------CCCEEEEEeCCcCcEE
Confidence 99999999999999999999999999999999999995 3499999999999999987 3345667788999999
Q ss_pred EEEEecCCCEEEEEcCCCeEEEEEcCccccccc-----ccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCC
Q 046226 288 TLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ-----YGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 288 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~ 359 (434)
++++ ++.+|++|+.||.|++||+........ ....+.+|...|.++++++++|++|+.||.|++||+.+.
T Consensus 341 ~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 341 CIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred EEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 9999 789999999999999999865432111 234567899999999999999999999999999999876
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-35 Score=273.76 Aligned_cols=276 Identities=12% Similarity=0.149 Sum_probs=225.1
Q ss_pred cccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEee-ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCcee
Q 046226 53 LHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLK-KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTE 124 (434)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~ 124 (434)
++............+..+++++.+..+..|+ +...+.. |.+.|++++| ++++|++|+.||.|++||+.+++.
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK 168 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE
Confidence 4444444433444455667777777766654 3445544 8999999999 899999999999999999999999
Q ss_pred EeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCC-ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 125 CGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNG-VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 125 ~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
+..+..|...|.+++|+++.+++++.||.|++||+..... ...+ .+|...|.+++|+
T Consensus 169 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------~~~~~~v~~~~~~ 226 (401)
T 4aez_A 169 LRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL----------------------QGHSSEVCGLAWR 226 (401)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE----------------------ECCSSCEEEEEEC
T ss_pred EEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEE----------------------cCCCCCeeEEEEc
Confidence 9999999999999999999999999999999999974332 2222 2699999999999
Q ss_pred cCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC--eEEEEe--CCCeEEEEecccccCcceeEEEEEe
Q 046226 204 VSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VLYSAS--DDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 204 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
|++++|++|+.||.|++||+++++.+..+..|...|.+++|+|++ ++++++ .|+.|++||++. ......+
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~------~~~~~~~ 300 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT------GARVNTV 300 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT------CCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC------CCEEEEE
Confidence 999999999999999999999999999999999999999999977 666665 799999999872 2222333
Q ss_pred cccccCeEEEEEecCCCEEEE--EcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEe
Q 046226 280 TAKYSPVKTLTLTLDDGLLYG--GCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWA 355 (434)
Q Consensus 280 ~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd 355 (434)
. +...+.+++|+|+++++++ |+.||.|++||+...... ....+.+|...|.+++|+ +.+|++++.||.|++||
T Consensus 301 ~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~--~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 301 D-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT--KQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp E-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE--EEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred e-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce--eEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 2 5578999999999999999 558999999998753222 223456888999999986 67999999999999999
Q ss_pred ccCC
Q 046226 356 REQD 359 (434)
Q Consensus 356 ~~~~ 359 (434)
+.++
T Consensus 378 ~~~~ 381 (401)
T 4aez_A 378 VYDG 381 (401)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 9987
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=270.17 Aligned_cols=263 Identities=15% Similarity=0.160 Sum_probs=216.1
Q ss_pred eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC--CceeEeeccCCCccEEEEEEeC----CEEEEEEcCCeE
Q 046226 83 RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP--EFTECGRLKAKTSMVVAMEVSH----DRVYAAYGDGKI 154 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~~----~~l~~~s~dg~i 154 (434)
+++..+.+|.+.|++++| ++++|++|+.||.|+|||+. +.+.+..+.+|...|.+++|++ +.|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 456778999999999999 89999999999999999997 6677888999999999999974 489999999999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCCe--eEE
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDSK--CIE 230 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~--~~~ 230 (434)
++||+..++..... .+..|...|.+++|+|+ +.+|++++.||.|++||+.++. ...
T Consensus 82 ~iwd~~~~~~~~~~--------------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 82 LIWKEENGRWSQIA--------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp EEEEEETTEEEEEE--------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE
T ss_pred EEEEcCCCceeEee--------------------eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE
Confidence 99999765421111 11258999999999999 9999999999999999998873 445
Q ss_pred EcccCccCeEEEEEcC-------------CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC--
Q 046226 231 TIQAHSEPINALVVAD-------------DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD-- 294 (434)
Q Consensus 231 ~~~~~~~~v~~~~~~~-------------~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 294 (434)
.+..|...|.+++|+| ++ .+++++.|+.|++||++ ...........+..|...|.+++|+|+
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec--CCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 6678999999999999 46 99999999999999997 334445566778889999999999999
Q ss_pred -CCEEEEEcCCCeEEEEEcCcccccc-cccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEE
Q 046226 295 -DGLLYGGCTDGYIHYWHKGWFSAQL-QYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAV 367 (434)
Q Consensus 295 -~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 367 (434)
+++|++++.||.|++||++...... ........|...|.+++|+ +++|++++.||.|++|++........+..
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 296 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGE 296 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccccc
Confidence 8999999999999999997643221 1222334578889999985 66999999999999999987654444443
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-36 Score=274.50 Aligned_cols=258 Identities=17% Similarity=0.204 Sum_probs=213.0
Q ss_pred eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE
Q 046226 123 TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 123 ~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 200 (434)
+.+..+.+|...|.+++|+|+ .|++++.||.|++||+......... .+.+|...|.++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------------------~~~~h~~~v~~~ 61 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--------------------TLTGHEGPVWRV 61 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE--------------------EECCCSSCEEEE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeee--------------------EecCCCCcEEEE
Confidence 456678899999999999997 8999999999999998632211111 123699999999
Q ss_pred EEecC--CCEEEEEecCCcEEEEEcCCCe--eEEEcccCccCeEEEEEcCC--C-eEEEEeCCCeEEEEecccccCccee
Q 046226 201 AINVS--DDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALVVADD--G-VLYSASDDATVRVWRRYFYSENQLH 273 (434)
Q Consensus 201 ~~~~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~~~~ 273 (434)
+|+++ +++|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + ++++++.|+.|++||++....
T Consensus 62 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---- 137 (379)
T 3jrp_A 62 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT---- 137 (379)
T ss_dssp EECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC----
T ss_pred EeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc----
Confidence 99977 9999999999999999999987 77888889999999999998 7 999999999999999983211
Q ss_pred EEEEEecccccCeEEEEEec-------------CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--
Q 046226 274 TLILTLTAKYSPVKTLTLTL-------------DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV-- 338 (434)
Q Consensus 274 ~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 338 (434)
.....+..|...|.+++|+| ++.+|++++.||.|++||++...........+.+|...|.+++|+
T Consensus 138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence 22234567889999999999 699999999999999999976655555556777899999999986
Q ss_pred ---CCEEEEecCCCcEEEEeccCCCceeeEE--EeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 339 ---ANYVISGSADSTSRVWAREQDGRHTMLA--VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 339 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
+++|++++.||.|++||+..+....... ....|...|++++|+|+ +.+|++++.||.|++|++..+
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEESSSSEEEEEEEET
T ss_pred CCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCC---------CCEEEEecCCCcEEEEeCCCC
Confidence 5689999999999999999864322233 33448899999999999 899999999999999999854
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4e-35 Score=264.60 Aligned_cols=283 Identities=17% Similarity=0.229 Sum_probs=233.9
Q ss_pred CCCcccccCCCCCCCCCCC-CCccCCCCCCCcccceee----------eEEEeeccccEEEEEE--cCCEEEEEeCCCeE
Q 046226 48 SSPISLHTSPLSSPRHPFN-PTAAAGSSSPETSSSYRC----------ISSVLKKDGQILCIAV--GNGFIYTGSDSNVI 114 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i 114 (434)
...+.+|...+.+..+.++ +..+++++.|.+++.|+. ..++.+|.+.|.+++| ++++|++|+.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3457899999999988876 678999999999998873 5678999999999999 89999999999999
Q ss_pred EEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccC
Q 046226 115 RIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK 192 (434)
Q Consensus 115 ~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (434)
++|+............+...+..+.++++ .+++++.|+.+++||+........ ...+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~---------------------~~~~ 169 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV---------------------QDES 169 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE---------------------CSSS
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEE---------------------Eecc
Confidence 99999999988888889999999999886 899999999999999864322111 1236
Q ss_pred cCCCeEEEEEecCC--CEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccC
Q 046226 193 HMGPITSIAINVSD--DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSE 269 (434)
Q Consensus 193 ~~~~v~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~ 269 (434)
|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|...|++++|+|++ +|++|+.|+.|++||++
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~---- 245 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN---- 245 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT----
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec----
Confidence 89999999998764 578899999999999999999999999999999999999999 99999999999999987
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccc-----cCcccCcccceEEEEee--CCEE
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQY-----GGALQGHTHAVMCLASV--ANYV 342 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~~~~~v~~~~~~--~~~l 342 (434)
.......+. +...+.+++|+|++.+ ++++.|+.|++||++.......+ .....+|...|.+++|+ +++|
T Consensus 246 --~~~~~~~~~-~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 321 (340)
T 4aow_A 246 --EGKHLYTLD-GGDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL 321 (340)
T ss_dssp --TTEEEEEEE-CSSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred --cCceeeeec-CCceEEeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence 222333333 3468999999998765 55667999999998754332222 12345788899999986 6699
Q ss_pred EEecCCCcEEEEeccCC
Q 046226 343 ISGSADSTSRVWAREQD 359 (434)
Q Consensus 343 ~s~~~dg~i~iwd~~~~ 359 (434)
++|+.||.|+|||+++|
T Consensus 322 ~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 322 FAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEETTSCEEEEEEEC-
T ss_pred EEEeCCCEEEEEeCCCc
Confidence 99999999999999987
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-36 Score=274.08 Aligned_cols=282 Identities=13% Similarity=0.102 Sum_probs=217.3
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCCCccccee-------eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCc
Q 046226 52 SLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-------CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEF 122 (434)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~ 122 (434)
..+..++.+..+.+++..+++++.+..+..|+ ++..+.+|.+.|.+++| ++++|++|+.|+.|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 34567899999999999999999998877764 45567889999999999 7899999999999999999987
Q ss_pred e---eEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccC-cCCC
Q 046226 123 T---ECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK-HMGP 196 (434)
Q Consensus 123 ~---~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 196 (434)
+ ....+..|...|.+++|+|+ .+++++.|+.|++||+...+....... +.+ |...
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------------~~~~h~~~ 148 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH-------------------LKRPLRST 148 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE-------------------ECSSCCSC
T ss_pred CceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE-------------------eecccCCC
Confidence 7 67778889999999999987 899999999999999987653111110 114 8999
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEcC------------------CCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCC
Q 046226 197 ITSIAINVSDDTLYSASLDKTIKVWRIR------------------DSKCIETIQAHSEPINALVVADDG-VLYSASDDA 257 (434)
Q Consensus 197 v~~~~~~~~~~~l~s~~~dg~i~vwd~~------------------~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg 257 (434)
|.+++|+|++++|++++.|+.|++||+. .++++..+ .|...|.+++|+|++ +|++++.||
T Consensus 149 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 149 ILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC
Confidence 9999999999999999999999999985 35567777 899999999999999 999999999
Q ss_pred eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccc----cc-------------
Q 046226 258 TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ----LQ------------- 320 (434)
Q Consensus 258 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~------------- 320 (434)
.|++||+.. ..........+..|...|.+++|+|++++|++++.++.+ +|+....... ..
T Consensus 228 ~i~iwd~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T 3dwl_C 228 SVTIAYPSA--PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGN 304 (377)
T ss_dssp EEC-CEECS--TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSS
T ss_pred cEEEEECCC--CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccc
Confidence 999999982 222223355677888999999999999999999876665 6665421100 00
Q ss_pred -------------------------------ccCcccCcccceEEEEee---CC---EEEEecCCCcEEEEec
Q 046226 321 -------------------------------YGGALQGHTHAVMCLASV---AN---YVISGSADSTSRVWAR 356 (434)
Q Consensus 321 -------------------------------~~~~~~~~~~~v~~~~~~---~~---~l~s~~~dg~i~iwd~ 356 (434)
.......|...|.++.+. +. .|++|+.||.|++||+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 305 TGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp BCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000112388999999864 23 6999999999999985
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.1e-35 Score=272.85 Aligned_cols=283 Identities=16% Similarity=0.197 Sum_probs=219.3
Q ss_pred EEEEcCC---EEEEEeCCCeEEEecCCCce----eEeeccCCCccEEEEEEeC-C--EEEEEEcCCeEEEeecCCCCCce
Q 046226 97 CIAVGNG---FIYTGSDSNVIRIWKQPEFT----ECGRLKAKTSMVVAMEVSH-D--RVYAAYGDGKIRVWRSTWDNGVK 166 (434)
Q Consensus 97 ~~~~~~~---~l~tg~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~-~--~l~~~s~dg~i~vwd~~~~~~~~ 166 (434)
.++++.+ ++++|+.||.|+||++.... .+..+.+|...|.+++|+| + .|++++.||.|++||+..+....
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 4555333 34457889999999986542 3445778999999999998 5 89999999999999998764321
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC-CEEEEEecCCcEEEEEcCCCeeEEEc--ccCccCeEEEE
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLDKTIKVWRIRDSKCIETI--QAHSEPINALV 243 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~~~ 243 (434)
... ..+. .+.+|...|.+++|+|++ ++|++++.||.|++||+++++.+..+ ..|...|.+++
T Consensus 119 ~~~--------~~~~-------~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 119 PLR--------EPVI-------TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp CBC--------SCSE-------EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEE
T ss_pred ccC--------CceE-------EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEE
Confidence 110 0111 112699999999999998 69999999999999999999999999 78999999999
Q ss_pred EcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEe-cccccC-eEEEEEecCCCEEEEE---cCCCeEEEEEcCcccc
Q 046226 244 VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTL-TAKYSP-VKTLTLTLDDGLLYGG---CTDGYIHYWHKGWFSA 317 (434)
Q Consensus 244 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~ 317 (434)
|+|++ +|++++.|+.|++||++ .......+ ..|... +.++.|+|++.+|++| +.|+.|++||++....
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPR------KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETT------TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred ECCCCCEEEEEecCCcEEEEeCC------CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 99999 99999999999999987 22344444 566655 8999999999999999 7999999999976543
Q ss_pred cccccCcccCcccceEEEEee--CCEEE-EecCCCcEEEEeccCCCc-eeeEEEeeccccceeEEEEeecccCCCCCCcc
Q 046226 318 QLQYGGALQGHTHAVMCLASV--ANYVI-SGSADSTSRVWAREQDGR-HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 318 ~~~~~~~~~~~~~~v~~~~~~--~~~l~-s~~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 393 (434)
.... ....|...+.++.|+ +++|+ +|+.||.|++||+.++.. ...+..+. |...|.+++|+|+ +
T Consensus 258 ~~~~--~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~---------~ 325 (402)
T 2aq5_A 258 PLSL--QELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPK---------R 325 (402)
T ss_dssp CSEE--EECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCG---------G
T ss_pred CceE--EeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEecc---------c
Confidence 2221 112456678888886 55665 666899999999998743 23333333 6689999999999 7
Q ss_pred cEEEEeecCCeEEEEecCCCC
Q 046226 394 CTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 394 ~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
.++++ .|+.+++|++.+++
T Consensus 326 ~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 326 GLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp GSCGG--GTEEEEEEEEETTE
T ss_pred cccee--cceeEEEEEcCCCc
Confidence 77765 56799999998754
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3e-35 Score=296.36 Aligned_cols=323 Identities=17% Similarity=0.213 Sum_probs=263.2
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----eeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC
Q 046226 48 SSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----CISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP 120 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~ 120 (434)
.+.+.+|...+.+..+++++..+++++.+..+..|+ .+..+.+|.+.|.+++| ++++|++|+.||.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 345678999999999999999999998887765554 67889999999999999 89999999999999999999
Q ss_pred CceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeE
Q 046226 121 EFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPIT 198 (434)
Q Consensus 121 ~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 198 (434)
+++.+..+..|...|.+++|+|+ .+++++.||.|++||+..+...... +.+|...|.
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---------------------~~~~~~~v~ 144 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT---------------------FEGHEHFVM 144 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE---------------------EECCSSCEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE---------------------EcCCCCcEE
Confidence 99999999999999999999997 7999999999999999765222111 126999999
Q ss_pred EEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEcccCc-cCeEEEEEcC--CC-eEEEEeCCCeEEEEecccccCccee
Q 046226 199 SIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQAHS-EPINALVVAD--DG-VLYSASDDATVRVWRRYFYSENQLH 273 (434)
Q Consensus 199 ~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~ 273 (434)
+++|+| ++..|++++.||.|++||+.+++....+..+. ..+.+++|+| ++ .+++++.||.|++||+. ..
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~------~~ 218 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ------TK 218 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT------TT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC------CC
Confidence 999999 88999999999999999999888777776654 8999999998 77 99999999999999987 23
Q ss_pred EEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC----EEEEecCCC
Q 046226 274 TLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN----YVISGSADS 349 (434)
Q Consensus 274 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~l~s~~~dg 349 (434)
.....+..|...|.+++|+|++++|++++.||.|++||+..... ...+..|...+.+++++++ +++++ .|+
T Consensus 219 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~ 293 (814)
T 3mkq_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV----EKTLNVGLERSWCIATHPTGRKNYIASG-FDN 293 (814)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE----EEEECCSSSSEEEEEECTTCGGGEEEEE-ETT
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEeecCCCcEEEEEEccCCCceEEEEE-eCC
Confidence 45566778889999999999999999999999999999875433 2345567789999998744 35555 467
Q ss_pred cEEEEeccCCCce-------eeE---------------------------------EEeeccccceeEEEEeecccCCCC
Q 046226 350 TSRVWAREQDGRH-------TML---------------------------------AVLVGHRGPIRCAIAFLGRFGEET 389 (434)
Q Consensus 350 ~i~iwd~~~~~~~-------~~~---------------------------------~~~~~h~~~v~~~~~~~~~~~~~~ 389 (434)
.+.+|++...... ..+ ..+..+...+.+++|+|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd------ 367 (814)
T 3mkq_A 294 GFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPN------ 367 (814)
T ss_dssp EEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTT------
T ss_pred CEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCC------
Confidence 7888887643210 011 122345556788999988
Q ss_pred CCcccEEEEeecCCeEEEEecCC
Q 046226 390 EDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 390 ~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
|++|++++ ||.+.+|++..
T Consensus 368 ---g~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 368 ---GRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp ---SSEEEEEE-TTEEEEEETTT
T ss_pred ---CCEEEEec-CCEEEEEECcc
Confidence 77787777 78888888654
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-35 Score=291.95 Aligned_cols=281 Identities=19% Similarity=0.277 Sum_probs=228.6
Q ss_pred CcccccCCCCCCCCCCC-CCccCCCCCCCcccceee----------eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEE
Q 046226 50 PISLHTSPLSSPRHPFN-PTAAAGSSSPETSSSYRC----------ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRI 116 (434)
Q Consensus 50 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~i 116 (434)
.+.+|...+.+..++++ ...+++++.|.+++.|+. ...+.+|.+.|.+++| ++++|++|+.||+|+|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 57789999998887765 467889999999988854 4678999999999999 8999999999999999
Q ss_pred ecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC
Q 046226 117 WKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM 194 (434)
Q Consensus 117 wd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (434)
||+.+++.+..+.+|...|.+++|+|+ .+++++.|++|++||+......... ....+|.
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~-------------------~~~~~h~ 517 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS-------------------EGGEGHR 517 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC-------------------SSTTSCS
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec-------------------cCCCCCC
Confidence 999999999999999999999999997 8999999999999997533111100 0112689
Q ss_pred CCeEEEEEecCC--CEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcc
Q 046226 195 GPITSIAINVSD--DTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQ 271 (434)
Q Consensus 195 ~~v~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~ 271 (434)
..|.+++|+|++ ..|++|+.|+.|++||++++++...+.+|...|.+++|+|++ +|++++.||.|++||++
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~------ 591 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA------ 591 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT------
T ss_pred CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC------
Confidence 999999999986 689999999999999999999999999999999999999999 99999999999999987
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc---------------cCcccceEEEE
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL---------------QGHTHAVMCLA 336 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~~~~~v~~~~ 336 (434)
.......+. +...+.+++|+|++.+|++++ ++.|++||++.......+.... ..+...+.+++
T Consensus 592 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 669 (694)
T 3dm0_A 592 EGKKLYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLN 669 (694)
T ss_dssp TTEEEECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEE
T ss_pred CCceEEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEE
Confidence 222333333 346799999999988887765 5669999997654332221111 11122367777
Q ss_pred ee--CCEEEEecCCCcEEEEecc
Q 046226 337 SV--ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 337 ~~--~~~l~s~~~dg~i~iwd~~ 357 (434)
|+ +++|++|+.||.|++|++.
T Consensus 670 ~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 670 WSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred EcCCCCEEEEEcCCCeEEEEecc
Confidence 75 6799999999999999985
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.7e-35 Score=273.12 Aligned_cols=292 Identities=13% Similarity=0.083 Sum_probs=233.6
Q ss_pred CCcccccCCCCCCCCCCCCCccCCCCCCCccccee-----------eeEEEeeccccEEEEEE--c----C---CEEEEE
Q 046226 49 SPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR-----------CISSVLKKDGQILCIAV--G----N---GFIYTG 108 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~h~~~v~~~~~--~----~---~~l~tg 108 (434)
..+.+|...+.+..+.+ ..+++++.+..+..|+ ++..+.+|.+.|++++| + + ++|++|
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 34667888888887765 7888888887766654 47778899999999999 6 7 899999
Q ss_pred eCCCeEEEecCCCcee-----EeeccCC-----CccEEEEEEe----CC--E-EEEEEcCCeEEEeecCC------CCCc
Q 046226 109 SDSNVIRIWKQPEFTE-----CGRLKAK-----TSMVVAMEVS----HD--R-VYAAYGDGKIRVWRSTW------DNGV 165 (434)
Q Consensus 109 ~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~l~~~----~~--~-l~~~s~dg~i~vwd~~~------~~~~ 165 (434)
+.||.|++||+.+++. ...+..| ...|.+++|+ |+ . +++++.||.|++||+.. ...+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 9999999999988776 7888888 5899999999 76 7 99999999999999987 4443
Q ss_pred eeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEccc---C---ccCe
Q 046226 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA---H---SEPI 239 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~---~~~v 239 (434)
..... ..+.........|...|.+++|+|++ +|++++.||.|++||+++++.+..+.. | ...|
T Consensus 168 ~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 168 NWSPT----------LELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp CCCCE----------EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred eccCc----------ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 30000 00000000112488999999999999 999999999999999999999999998 8 9999
Q ss_pred EEEEEcCCC-eEEEEeCC---CeEEEEecccccCcceeEEEEEecc-------------cccCeEEEEEecCCCEEEEEc
Q 046226 240 NALVVADDG-VLYSASDD---ATVRVWRRYFYSENQLHTLILTLTA-------------KYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 240 ~~~~~~~~~-~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~ 302 (434)
.+++|+|++ +|++++.| +.|++||++ .......+.. |...|.+++|+|++++|++++
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETE------FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETT------TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECC------CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 999999999 99999999 999999987 2234455666 889999999999999999999
Q ss_pred CCCeEEEEEcCcccccccccCc--ccCc---------------ccceEEEEeeC------------CEEEEecCCCcEEE
Q 046226 303 TDGYIHYWHKGWFSAQLQYGGA--LQGH---------------THAVMCLASVA------------NYVISGSADSTSRV 353 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~~~~~~--~~~~---------------~~~v~~~~~~~------------~~l~s~~~dg~i~i 353 (434)
.||.|++||++.......+... ..+| ...|.+++|++ ++|++++.||.|++
T Consensus 311 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 311 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 9999999999765433332100 0044 88999999973 49999999999999
Q ss_pred EeccCC
Q 046226 354 WAREQD 359 (434)
Q Consensus 354 wd~~~~ 359 (434)
||+.++
T Consensus 391 w~~~~g 396 (397)
T 1sq9_A 391 FREAGG 396 (397)
T ss_dssp EEEEC-
T ss_pred EEcCCC
Confidence 999875
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.2e-36 Score=271.52 Aligned_cols=286 Identities=15% Similarity=0.248 Sum_probs=228.3
Q ss_pred ccccCCCCCCCCCCC----CCccCCCCCCCcccceee-----eEEEee-----ccccEEEEEE--c----CCEEEEEeCC
Q 046226 52 SLHTSPLSSPRHPFN----PTAAAGSSSPETSSSYRC-----ISSVLK-----KDGQILCIAV--G----NGFIYTGSDS 111 (434)
Q Consensus 52 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~-----h~~~v~~~~~--~----~~~l~tg~~d 111 (434)
.+|..++.+..+.+. ...+..+..+..+..|+. +..+.. |.+.|++++| + +++|++|+.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 467888888777753 333444444445555554 344544 5578999999 4 5799999999
Q ss_pred CeEEEecCCCceeEeeccCCCccEEEEEEeC-C--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccc
Q 046226 112 NVIRIWKQPEFTECGRLKAKTSMVVAMEVSH-D--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
|.|++||+.+++.+..+.+|...|.+++|+| + .+++++.||.|++||+..++....+.
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------- 155 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG------------------- 155 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC-------------------
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec-------------------
Confidence 9999999999999999999999999999998 4 89999999999999998665443331
Q ss_pred cccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEccc----------------------------CccCeE
Q 046226 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA----------------------------HSEPIN 240 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----------------------------~~~~v~ 240 (434)
.+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.. |...|.
T Consensus 156 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (366)
T 3k26_A 156 GVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVD 235 (366)
T ss_dssp STTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCC
T ss_pred ccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEE
Confidence 0126999999999999999999999999999999998765544443 899999
Q ss_pred EEEEcCCCeEEEEeCCCeEEEEecccccC--------cceeEEEEEecccccCeEEEEEecC--CCEEEEEcCCCeEEEE
Q 046226 241 ALVVADDGVLYSASDDATVRVWRRYFYSE--------NQLHTLILTLTAKYSPVKTLTLTLD--DGLLYGGCTDGYIHYW 310 (434)
Q Consensus 241 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~ 310 (434)
+++|+ ..++++++.|+.|++||++.... .........+..|...|.+++|+|+ +++|++|+.||.|++|
T Consensus 236 ~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 236 CVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp EEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred EEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 99999 44999999999999999873221 1123456677888899999999999 9999999999999999
Q ss_pred EcCcccccccccCcccCc--ccceEEEEee--CCEEEEecCCCcEEEEecc
Q 046226 311 HKGWFSAQLQYGGALQGH--THAVMCLASV--ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 311 d~~~~~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~ 357 (434)
|+............+.+| ...|.+++|+ +++|++++.||.|++||+.
T Consensus 315 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 315 DLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 998665443333355566 7899999996 6699999999999999985
No 91
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-35 Score=270.33 Aligned_cols=267 Identities=8% Similarity=-0.032 Sum_probs=209.4
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceee
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHV 168 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 168 (434)
-...|.+++| ||+++|+++.|++|+ |...+ ..+++|...|.+++|+|+. .++.+.+|+.+ ....+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-----~~~~~~~~~~~---~~~~~ 80 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-----FENKLDFELAQ---QNGLL 80 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-----CCCTTTTSCCC---SSCSS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-----CcceEEEEeCC---CceEe
Confidence 4577999999 999999999999999 64444 4557999999999999986 45555555432 22111
Q ss_pred EeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCcc-----CeEEEE
Q 046226 169 KLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE-----PINALV 243 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~v~~~~ 243 (434)
. ..|...|.+++|+|+|.+|++++.||.|++||.+. ++..+. |.. .|.+++
T Consensus 81 ~---------------------~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 81 N---------------------SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp T---------------------TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEE
T ss_pred e---------------------cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEE
Confidence 1 14678899999999999999999999999999644 667777 665 499999
Q ss_pred EcCCC-eEEEEeCCCeEEEEecccccCcc-eeEEEEEe----cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccc
Q 046226 244 VADDG-VLYSASDDATVRVWRRYFYSENQ-LHTLILTL----TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSA 317 (434)
Q Consensus 244 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 317 (434)
|+|+| +|++|+.||+|++||+....... .......+ .+|...|.+++|+|+| +++++.|+.|++||+.....
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc
Confidence 99999 99999999999999987321100 00123333 6677899999999999 88889999999999865442
Q ss_pred cccccCcc-cCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEE--eecccCCCCCCccc
Q 046226 318 QLQYGGAL-QGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIA--FLGRFGEETEDEYC 394 (434)
Q Consensus 318 ~~~~~~~~-~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~ 394 (434)
. .....+ .+|...|.+++|+++.|++++ ++.|++||+.++ .......+|.+.|..++| +|+ +.
T Consensus 215 ~-~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~---~~~~~~~gh~~~V~~va~~~s~d---------~~ 280 (588)
T 2j04_A 215 Q-PVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNY---SISSLKTGSLENFHIIPLNHEKE---------ST 280 (588)
T ss_dssp C-CCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTT---EEEEEECSCCSCCCEEEETTCSS---------CE
T ss_pred c-cceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCC---eEEEEEcCCCceEEEEEeeeCCC---------CC
Confidence 1 111224 378889999999988999997 699999999986 442333389999999999 888 89
Q ss_pred EEEEeecCCeEEEEecC
Q 046226 395 TICTGSLDGVLKMWRVT 411 (434)
Q Consensus 395 ~l~s~~~Dg~v~iw~~~ 411 (434)
.|+++++||+ ++|.++
T Consensus 281 ~La~a~edG~-klw~~d 296 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEECSSCEE-EEEESS
T ss_pred EEEEEcCCCC-EEEeec
Confidence 9999999999 999975
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-34 Score=258.98 Aligned_cols=288 Identities=17% Similarity=0.228 Sum_probs=241.9
Q ss_pred CCcccccCCCCCCCCCCCCCccCCCCCCCcccce-----eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCC
Q 046226 49 SPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPE 121 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~ 121 (434)
..+.+|...+.+..+.+++..+++++.+..+..| +++..+.+|.+.|.+++| ++++|++++.||.|++||+.+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 3578899999999999999999999888776555 467889999999999999 799999999999999999999
Q ss_pred ceeEeeccCCCccEEEEEEeCC--EEEEEEcC-----CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC
Q 046226 122 FTECGRLKAKTSMVVAMEVSHD--RVYAAYGD-----GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM 194 (434)
Q Consensus 122 ~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (434)
++.+..+. +...|.+++|+|+ .+++++.+ +.|++||+........+.... ......+ ..|.
T Consensus 106 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~----~~~~~~~-------~~~~ 173 (369)
T 3zwl_B 106 GQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS----EEPIHKI-------ITHE 173 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC----SSCSEEE-------ECCT
T ss_pred CcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc----cceeeec-------cCCc
Confidence 99988887 8889999999997 88888888 999999998776544433211 1111111 2355
Q ss_pred C--CeEEEEEecCCCEEEEEecCCcEEEEEcCC-CeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCc
Q 046226 195 G--PITSIAINVSDDTLYSASLDKTIKVWRIRD-SKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 195 ~--~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
. .+.+++|+|++++|++++.||.|++||+.+ ++.+..+..|...|.+++|+|++ +|++++.|+.|++||++.
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---- 249 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST---- 249 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----
T ss_pred CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC----
Confidence 5 999999999999999999999999999998 78889999999999999999999 999999999999999872
Q ss_pred ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC--------------eEEEEEcCcccccccccCcccCcccceEEEE
Q 046226 271 QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG--------------YIHYWHKGWFSAQLQYGGALQGHTHAVMCLA 336 (434)
Q Consensus 271 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 336 (434)
......+. +...+..++|+|+++++++++.++ .+++||+..... ...+.+|...|.+++
T Consensus 250 --~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 250 --LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE----IGRVQGHFGPLNTVA 322 (369)
T ss_dssp --CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE----EEEEECCSSCEEEEE
T ss_pred --Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc----hhheecccCcEEEEE
Confidence 22223333 667899999999999999999988 899999865433 234568999999999
Q ss_pred ee--CCEEEEecCCCcEEEEeccCC
Q 046226 337 SV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 337 ~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
|+ +++|++++.||.|++|+++.+
T Consensus 323 ~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 323 ISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEEECHH
T ss_pred ECCCCCEEEEEcCCCeEEEEECccc
Confidence 96 669999999999999999864
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-34 Score=254.92 Aligned_cols=277 Identities=19% Similarity=0.249 Sum_probs=233.4
Q ss_pred CCCCCCcccccCCCCCCCCCCCCCccCCCCCCCcccceee-----eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEe
Q 046226 45 PRFSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYRC-----ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIW 117 (434)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iw 117 (434)
.+....+.+|...+.+..+ ++...+++++.+..+..|+. ...+..|.+.|.+++| ++++|++|+.||.|++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3455677889999999888 78888999999988777664 6778889999999999 89999999999999999
Q ss_pred cCCCc---eeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC
Q 046226 118 KQPEF---TECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM 194 (434)
Q Consensus 118 d~~~~---~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (434)
++.+. +.+..+..|...|.++.|.++.+++++.||.|++|| .......+ ..|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~----------------------~~~~ 142 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNL----------------------QAHN 142 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEE----------------------ECCS
T ss_pred EeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEec----------------------ccCC
Confidence 98653 567778899999999999988999999999999999 22222222 2599
Q ss_pred CCeEEEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEccc-CccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcce
Q 046226 195 GPITSIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQA-HSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQL 272 (434)
Q Consensus 195 ~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 272 (434)
..+.+++|.+ +++++++++.||.|++|| ..+.+..+.. |...+.+++|+|++.+++++.||.|++||++ .
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~------~ 214 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH------T 214 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT------T
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC------c
Confidence 9999999998 899999999999999999 4566777776 8999999999999999999999999999987 2
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-EEEEecCCCcE
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-YVISGSADSTS 351 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~dg~i 351 (434)
......+..|...|.+++|+|++ .|++++.||.|++||++.... ...+..|...|.+++|+++ .+++++.||.|
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i 289 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSL----KQVITLPAISIWSVDCMSNGDIIVGSSDNLV 289 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCE----EEEEECSSSCEEEEEECTTSCEEEEETTSCE
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCce----eEEEeccCceEEEEEEccCCCEEEEeCCCcE
Confidence 34556677899999999999998 688999999999999875533 2345678889999999733 47789999999
Q ss_pred EEEeccCC
Q 046226 352 RVWAREQD 359 (434)
Q Consensus 352 ~iwd~~~~ 359 (434)
++||++++
T Consensus 290 ~iw~~~~~ 297 (313)
T 3odt_A 290 RIFSQEKS 297 (313)
T ss_dssp EEEESCGG
T ss_pred EEEeCCCC
Confidence 99999876
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=261.70 Aligned_cols=290 Identities=13% Similarity=0.109 Sum_probs=227.1
Q ss_pred CcccccCCCCCCCCCCCCCcc-CCCCC---CCcccceee-----eEE-EeeccccEEEEEE--c---CCEEEEEeCCCeE
Q 046226 50 PISLHTSPLSSPRHPFNPTAA-AGSSS---PETSSSYRC-----ISS-VLKKDGQILCIAV--G---NGFIYTGSDSNVI 114 (434)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~-----~~~-~~~h~~~v~~~~~--~---~~~l~tg~~dg~i 114 (434)
...+|...+.+..+.+++..+ ++++. +..+..|+. ... ..+|.+.|.+++| + +++|++|+.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 446788999999888887555 45554 677777664 222 3479999999999 4 6999999999999
Q ss_pred EEecCCCce-eEeeccCCCccEEEEEEe------CC--EEEEEEcCCeEEEeecCCCC-CceeeEeeeccCCCCceeEEE
Q 046226 115 RIWKQPEFT-ECGRLKAKTSMVVAMEVS------HD--RVYAAYGDGKIRVWRSTWDN-GVKHVKLATIPKTGGAVRNLI 184 (434)
Q Consensus 115 ~iwd~~~~~-~~~~~~~~~~~v~~l~~~------~~--~l~~~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~ 184 (434)
++||+.+++ .+..+.+|...|.++.|. ++ .+++++.||.|++||+.... ....+....
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------ 160 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ------------ 160 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT------------
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC------------
Confidence 999999888 888899999999999764 44 89999999999999998765 333332100
Q ss_pred eccccccCcCCCeEEEE----EecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcC---CC-eEEEEeCC
Q 046226 185 VGKDKMMKHMGPITSIA----INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD---DG-VLYSASDD 256 (434)
Q Consensus 185 ~~~~~~~~~~~~v~~~~----~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---~~-~l~s~~~d 256 (434)
..+...|.+++ |++++++|++++.||.|++||+++++.... ..|...|.+++|+| ++ .+++++.|
T Consensus 161 ------~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 161 ------GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp ------TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred ------CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 01244788888 778999999999999999999999887554 56889999999999 77 99999999
Q ss_pred CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCcccccc---------------c
Q 046226 257 ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFSAQL---------------Q 320 (434)
Q Consensus 257 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---------------~ 320 (434)
|.|++||++......... ......|...|.+++|+|++. +|++++.||.|++||++...... .
T Consensus 234 g~i~i~d~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~ 312 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFA-SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVS 312 (357)
T ss_dssp TEEEEEEEEEEETTTEEE-EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEE
T ss_pred CeEEEEeCcCCCccccee-eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccc
Confidence 999999998433222221 224457889999999999998 89999999999999987543221 2
Q ss_pred ccCcccCcccceEEEEee--CCEEE-EecCCCcEEEEeccCC
Q 046226 321 YGGALQGHTHAVMCLASV--ANYVI-SGSADSTSRVWAREQD 359 (434)
Q Consensus 321 ~~~~~~~~~~~v~~~~~~--~~~l~-s~~~dg~i~iwd~~~~ 359 (434)
....+.+|...|.+++|+ +++|+ +++.||.|++||+.+.
T Consensus 313 ~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 313 LLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 334567899999999997 55676 8999999999999865
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=262.43 Aligned_cols=258 Identities=13% Similarity=0.166 Sum_probs=203.1
Q ss_pred EecCCCceeEeec-cCCCccEEEEEEeC-C--EEEEEEcCCeEEEeecCC---CCCceeeEeeeccCCCCceeEEEeccc
Q 046226 116 IWKQPEFTECGRL-KAKTSMVVAMEVSH-D--RVYAAYGDGKIRVWRSTW---DNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 116 iwd~~~~~~~~~~-~~~~~~v~~l~~~~-~--~l~~~s~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
.|+ .+++.+..+ .+|.+.|.+++|+| + .|++|+.||.|++||+.. +.......
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~------------------- 106 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL------------------- 106 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE-------------------
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee-------------------
Confidence 388 567788888 88999999999999 6 899999999999999865 22111000
Q ss_pred cccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcC---CCeeEEEccc------------CccCeEEEE--EcCCC-eE
Q 046226 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIR---DSKCIETIQA------------HSEPINALV--VADDG-VL 250 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~-~l 250 (434)
..+|...|.+++|+|++++|++|+.||.|++||++ +++.+..+.. +...+.++. +++++ +|
T Consensus 107 -~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 107 -TYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp -EEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred -eccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 01489999999999999999999999999999995 5544443322 445666666 45677 99
Q ss_pred EEEeCCCeEEEEecccccCcceeEEEEEecc--cccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCccc-C
Q 046226 251 YSASDDATVRVWRRYFYSENQLHTLILTLTA--KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQ-G 327 (434)
Q Consensus 251 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~ 327 (434)
++++.|+.|++||++ .......+.. |...|.+++|+|++++|++|+.||.|++||++...... .+. .
T Consensus 186 ~~~~~d~~i~iwd~~------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~ 255 (437)
T 3gre_A 186 VALTNLSRVIIFDIR------TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR----SWSFG 255 (437)
T ss_dssp EEEETTSEEEEEETT------TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE----EEBCT
T ss_pred EEEeCCCeEEEEeCC------CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE----EEecC
Confidence 999999999999997 2334445555 78899999999999999999999999999997543322 222 5
Q ss_pred cccceEEEEee------CCEEEEecCCCcEEEEeccCCCceeeEEEeec--------------------------cccce
Q 046226 328 HTHAVMCLASV------ANYVISGSADSTSRVWAREQDGRHTMLAVLVG--------------------------HRGPI 375 (434)
Q Consensus 328 ~~~~v~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v 375 (434)
|...|.++.+. +.+|++|+.||.|++||++++ .++..+.+ |...|
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 332 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG---HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT---EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC---cEEEEEEcCCCCCccceecccccccccceecccccCCce
Confidence 67789999665 339999999999999999987 55555554 55567
Q ss_pred eEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 376 RCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
++++|+ + +.+|++|+.||.|++||+.+++...
T Consensus 333 ~~l~~~-~---------~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 333 STISVS-N---------DKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp CCEEEE-T---------TEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEEC-C---------ceEEEecCCCCeEEEEECCCcccce
Confidence 777777 4 7899999999999999999887543
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-33 Score=259.72 Aligned_cols=259 Identities=12% Similarity=0.101 Sum_probs=207.0
Q ss_pred EecCCCceeEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccC
Q 046226 116 IWKQPEFTECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK 192 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (434)
+|++...+....+.+|...|.+++|+|+ .+++++.||.|++||+...+....+. ..+
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~ 116 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ--------------------GMG 116 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC--------------------CCS
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee--------------------cCC
Confidence 4455667778888999999999999986 69999999999999998766544432 125
Q ss_pred cCCCeEEEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEcccC---ccCeEEEEEcCCC-eEEEEeCCCeEEEEecccc
Q 046226 193 HMGPITSIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQAH---SEPINALVVADDG-VLYSASDDATVRVWRRYFY 267 (434)
Q Consensus 193 ~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~ 267 (434)
|...|.+++|+| ++++|++++.|+.|++||+.+ +.+..+..+ ...|.+++|+|++ .|++++.|+.|++||++
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-- 193 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-- 193 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--
Confidence 999999999999 789999999999999999985 555555443 4789999999999 99999999999999985
Q ss_pred cCcceeEEEEEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC---CEEE
Q 046226 268 SENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA---NYVI 343 (434)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~ 343 (434)
......+..|...|.+++|+|+++ +|++++.|+.|++||++...........+ +|...|.+++|++ ++|+
T Consensus 194 -----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~ 267 (383)
T 3ei3_B 194 -----GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLL 267 (383)
T ss_dssp -----SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEE
T ss_pred -----CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEE
Confidence 224556678999999999999998 99999999999999998644333333333 6888999999865 6999
Q ss_pred EecCCCcEEEEeccCCCceeeEEEeecc-------ccc----------eeEEEEeecccCCCCCCcccEEEEeecCCeEE
Q 046226 344 SGSADSTSRVWAREQDGRHTMLAVLVGH-------RGP----------IRCAIAFLGRFGEETEDEYCTICTGSLDGVLK 406 (434)
Q Consensus 344 s~~~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~----------v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~ 406 (434)
+++.|+.|++||++++.. ...+.+| ... +..++++|+ +++ +|+.||.|+
T Consensus 268 ~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~d---------g~~--s~s~d~~i~ 333 (383)
T 3ei3_B 268 TTDQRNEIRVYSSYDWSK---PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPD---------DQL--LLNDKRTID 333 (383)
T ss_dssp EEESSSEEEEEETTBTTS---CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCC---------TTT--CTTCCCCEE
T ss_pred EEcCCCcEEEEECCCCcc---ccccccccccccccccceEEeccCCCCceEEEecCC---------ccc--ccCCCCeEE
Confidence 999999999999998743 2333333 233 334555555 665 888999999
Q ss_pred EEecCCCCccc
Q 046226 407 MWRVTRPKSSC 417 (434)
Q Consensus 407 iw~~~~~~~~~ 417 (434)
+||+.+++.+.
T Consensus 334 iwd~~~~~~~~ 344 (383)
T 3ei3_B 334 IYDANSGGLVH 344 (383)
T ss_dssp EEETTTCCEEE
T ss_pred EEecCCCceee
Confidence 99999887643
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-32 Score=255.46 Aligned_cols=252 Identities=16% Similarity=0.230 Sum_probs=208.5
Q ss_pred CCcccce-----eeeEEE--eeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEE
Q 046226 76 PETSSSY-----RCISSV--LKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVY 146 (434)
Q Consensus 76 ~~~~~~~-----~~~~~~--~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~ 146 (434)
+.+++.| +++..+ .+|.+.|+||+| +|++|++|+.||.|+|||+.+++.+..+.+|...+.++.+++..++
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 203 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEE
Confidence 5555555 445554 467889999999 8999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC
Q 046226 147 AAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS 226 (434)
Q Consensus 147 ~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 226 (434)
+++.|+.+++||.......... +.+|...+..+.++|+++++++++.|+.|++||..++
T Consensus 204 sgs~d~~i~~~d~~~~~~~~~~---------------------~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVAEHHVAT---------------------LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEETTSEEEEEETTSSSCEEEE---------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEeCCCceeEeeecccceeeEE---------------------ecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 9999999999998754332211 1269999999999999999999999999999999876
Q ss_pred e----eEEEcccCccCeEEEEEcCCC--eEEE--EeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE
Q 046226 227 K----CIETIQAHSEPINALVVADDG--VLYS--ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL 298 (434)
Q Consensus 227 ~----~~~~~~~~~~~v~~~~~~~~~--~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 298 (434)
+ .+.....|...|.+++|+|.+ .+++ |+.|+.|++||+. .......+. +...+.++.|+++++.+
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~------t~~~~~~~~-~~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC------SGACLSAVD-AHSQVCSILWSPHYKEL 335 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT------TTEEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC------ccccceeec-cccceeeeeecCCCCeE
Confidence 5 355667799999999999977 5554 4579999999987 222333333 34678999999999988
Q ss_pred EEEc--CCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 299 YGGC--TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 299 ~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
++++ .|+.|+|||+.... ....+.+|...|.+++|+ |++|++|+.|++|+|||+...
T Consensus 336 v~~sg~~d~~I~iwd~~~~~----~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMA----KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEECTTTCCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEecCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 8764 79999999986543 334567999999999996 679999999999999999865
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-34 Score=282.77 Aligned_cols=253 Identities=15% Similarity=0.164 Sum_probs=208.0
Q ss_pred eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC--CceeEeeccCCCccEEEEEEeCC----EEEEEEcCCeEEE
Q 046226 85 ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP--EFTECGRLKAKTSMVVAMEVSHD----RVYAAYGDGKIRV 156 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~~~----~l~~~s~dg~i~v 156 (434)
+..+.+|.+.|++++| ++++|++|+.||.|+|||+. +++.+..+.+|...|.+++|+++ .+++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 4567899999999999 89999999999999999987 56778889999999999999853 8999999999999
Q ss_pred eecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCC--eeEEEc
Q 046226 157 WRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDS--KCIETI 232 (434)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~--~~~~~~ 232 (434)
||+..+...... .+.+|...|.+++|+|+ ++++++|+.||.|++||+.++ .....+
T Consensus 82 wd~~~~~~~~~~--------------------~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 82 WKEENGRWSQIA--------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp EEEETTEEEEEE--------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred EECCCCcccccc--------------------cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 998765311111 11269999999999999 999999999999999999877 344566
Q ss_pred ccCccCeEEEEEcC-------------CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC---C
Q 046226 233 QAHSEPINALVVAD-------------DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD---D 295 (434)
Q Consensus 233 ~~~~~~v~~~~~~~-------------~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~ 295 (434)
..|...|.+++|+| ++ .+++|+.||.|++||++ ...........+..|...|.+++|+|+ +
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~--~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~ 219 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc--CCcccceeeeeecCCCCcEEEEEeccCCCCC
Confidence 78999999999999 35 99999999999999998 333445666778899999999999999 8
Q ss_pred CEEEEEcCCCeEEEEEcCccccccc-ccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 296 GLLYGGCTDGYIHYWHKGWFSAQLQ-YGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 296 ~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
++|++++.||.|++||++....... .......|...|.+++|+ +++|++|+.||.|++|++..+
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 9999999999999999976532211 223345688889888885 669999999999999999854
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-34 Score=270.81 Aligned_cols=261 Identities=11% Similarity=0.031 Sum_probs=194.6
Q ss_pred ccccEEEEEE--cC---------CEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEe
Q 046226 91 KDGQILCIAV--GN---------GFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVW 157 (434)
Q Consensus 91 h~~~v~~~~~--~~---------~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vw 157 (434)
+.+.|.+|+| ++ ++||+|+.++.. . ..+|+ .+++++.|++|+||
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------~-----~~~~~~~~laS~s~D~tI~iW 188 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------E-----PLNEHLEMFDKEKHSSCIQIF 188 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------CEEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------C-----ccchhhhhhccCCCCceEEEE
Confidence 7899999999 54 799999876521 0 12454 67889999999999
Q ss_pred ecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC------CCEEEEEecCCcEEEEEcCCCee---
Q 046226 158 RSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS------DDTLYSASLDKTIKVWRIRDSKC--- 228 (434)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~vwd~~~~~~--- 228 (434)
|+..++....... .+..|.+.|.+++|+|+ +.+|++++.||+|++||+.+++.
T Consensus 189 d~~~~~~~~~~~~------------------~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 189 KMNTSTLHCVKVQ------------------TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp EEETTTCCEEEEE------------------EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred EccCCCCCceEEE------------------EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 9876543211100 01147789999999996 57999999999999999986642
Q ss_pred --------EEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEE--EEecCC-CE
Q 046226 229 --------IETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTL--TLTLDD-GL 297 (434)
Q Consensus 229 --------~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~ 297 (434)
...+.+|...|.+++|++++.|++|+.||+|++||++... .....+..|...|.++ +|++++ .+
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~-----~~~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPE-----VPSFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCS-----SCSEEEECSSSCEEEEEEECCTTSCCE
T ss_pred cceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCC-----CceEEeecccccEEEEEEEcCCCCCeE
Confidence 2367789999999999987899999999999999997221 1223466899999999 568887 89
Q ss_pred EEEEcCCCeEEEEEcCcccccccccCcccCccc--ceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeecccc
Q 046226 298 LYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTH--AVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373 (434)
Q Consensus 298 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 373 (434)
|++|+.|++|+|||++...... .+.+|.. .|.+++|+ +..+++++.|++|++||++++ .++..+.+|.+
T Consensus 326 laS~S~D~tvklWD~~~~~~~~----~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~---~~~~~l~gH~~ 398 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTK----TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA---FAVHPLVSRET 398 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHC----EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT---TCCEEEEECSS
T ss_pred EEEeccCCeEEEEECCCCCccc----ccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc---ccceeeecCCC
Confidence 9999999999999987544322 2334432 46677776 568999999999999999987 56667889999
Q ss_pred ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 374 PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 374 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
.|++++|+|+ +.+|++|+.||+|++|++...
T Consensus 399 ~V~sva~Sp~---------g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 399 TITAIGVSRL---------HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEEECCSS---------CCBCEEEETTTEEECCBSCSS
T ss_pred ceEEEEeCCC---------CCeEEEEECCCEEEEEechHh
Confidence 9999999999 899999999999999998643
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-33 Score=256.94 Aligned_cols=275 Identities=15% Similarity=0.122 Sum_probs=209.5
Q ss_pred CCCCCCCCCCCCCccCCCCCCCc-------ccceee---------------eEEEeeccccEEEEEEcCCEEEEEe----
Q 046226 56 SPLSSPRHPFNPTAAAGSSSPET-------SSSYRC---------------ISSVLKKDGQILCIAVGNGFIYTGS---- 109 (434)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---------------~~~~~~h~~~v~~~~~~~~~l~tg~---- 109 (434)
.|+++..|.+++..+++++.+.+ ++.|+. ...+.+|.+.|++++++++.+++|.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~ 94 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS 94 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence 46788888888888888654332 444443 1245678899999999888888774
Q ss_pred -------CCCeEEEecCCCcee----Eee-----ccCCCccEEEEEEeCC--EEEEEE--cCCeEEEeecCCCCCceeeE
Q 046226 110 -------DSNVIRIWKQPEFTE----CGR-----LKAKTSMVVAMEVSHD--RVYAAY--GDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 110 -------~dg~i~iwd~~~~~~----~~~-----~~~~~~~v~~l~~~~~--~l~~~s--~dg~i~vwd~~~~~~~~~~~ 169 (434)
.|+.+++|++.+... ... ...+...+.+++|+|| ++++|+ .|++|++||+.+.+.+..+
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~- 173 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI- 173 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-
T ss_pred cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-
Confidence 467899998755321 111 1234567899999998 555554 5899999999876555444
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEE--EcccCccCeEEEEEcCC
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIE--TIQAHSEPINALVVADD 247 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~ 247 (434)
.|...|.+++|+|++++|++++.+ .+++|+..+++.+. ....|...|.+++|+|+
T Consensus 174 ----------------------~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 174 ----------------------ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp ----------------------ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred ----------------------CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence 378889999999999999999854 57777777776553 34568889999999999
Q ss_pred C-eEEEEeCCC----eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccccc
Q 046226 248 G-VLYSASDDA----TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYG 322 (434)
Q Consensus 248 ~-~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 322 (434)
+ .+++++.|+ .+++||+. ...........+..|...|++++|+|+|++|++|+.|+.|+|||+++.+....
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~-- 306 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIK--SGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI-- 306 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEE--TTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE--
T ss_pred CCEEEEEecCCcceeEEeecccc--cceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE--
Confidence 9 888888777 67888876 22223334456778889999999999999999999999999999875443222
Q ss_pred CcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 323 GALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 323 ~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
.+.+|...|++++|+ |++|++|+.|++|+|||+...
T Consensus 307 -~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 307 -FKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -ETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -ecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 246899999999996 679999999999999999754
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=254.54 Aligned_cols=277 Identities=10% Similarity=0.016 Sum_probs=202.7
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCce
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV 180 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 180 (434)
++.+|++|+.||.|++||+.+++.+..+. ...|.++.++|+ +++++.|+.|++|+......+... ..+..+
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~------~~~~~~ 117 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDS------KTNKVL 117 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEET------TTCCEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeec------CCccee
Confidence 78899999999999999999998887776 567888889998 999999999999987642111000 111112
Q ss_pred eEEEeccccccCcCCCeEEEEEec--CCCEEEEEecCCcEEEEEcCCCeeEEEccc-CccCeEEEEEcCCC-eEEEEeCC
Q 046226 181 RNLIVGKDKMMKHMGPITSIAINV--SDDTLYSASLDKTIKVWRIRDSKCIETIQA-HSEPINALVVADDG-VLYSASDD 256 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~-~l~s~~~d 256 (434)
.... .+|...|.+++|+| ++++|++++.||.|++||+++++.+..... +...+.+++|+|++ +|++|+.|
T Consensus 118 ~~~~------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 118 REIE------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp EEEE------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred EEee------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 2221 25778999999999 999999999999999999999988776643 55689999999999 99999999
Q ss_pred CeEEEEecccccCcceeEEEEEecc-cccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccce--E
Q 046226 257 ATVRVWRRYFYSENQLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAV--M 333 (434)
Q Consensus 257 g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v--~ 333 (434)
|.|++||++... . ....+.. |..+|.+++|+|++.+|++++ |+.|++||++.......+ ..+..|...+ .
T Consensus 192 g~i~iwd~~~~~--~---~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 192 GILDVYNLSSPD--Q---ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY-PTYTIPEFKTGTV 264 (343)
T ss_dssp SCEEEEESSCTT--S---CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS-CCCBC-----CCE
T ss_pred CEEEEEECCCCC--C---CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee-cccccccccccce
Confidence 999999998221 1 1133455 889999999999999999999 559999999865433222 1222233333 2
Q ss_pred EEEee--CCEEEEecC-CCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 334 CLASV--ANYVISGSA-DSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 334 ~~~~~--~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
+++|+ +++|++++. |+.|++|++...... ... .++..+.|.+.. .+...|++++.||.+.++-.
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~---~~~----~~~~~~~~~~~~------~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN---WTK----DEESALCLQSDT------ADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCS---EEE----EEEEECCC----------CCCCEEEEEEETTEEEEEEE
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccccc---eEe----cCceeEecCccc------cccceeEEEecCCceEEEEe
Confidence 46665 779999888 999999999765321 111 556777787710 01678999999999998865
Q ss_pred CC
Q 046226 411 TR 412 (434)
Q Consensus 411 ~~ 412 (434)
..
T Consensus 332 ~~ 333 (343)
T 3lrv_A 332 TN 333 (343)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=256.72 Aligned_cols=285 Identities=14% Similarity=0.050 Sum_probs=220.7
Q ss_pred cccEEEEEE--cCCEEEEEeCCCeEEEecCCCce---eEeeccC------------------------------------
Q 046226 92 DGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT---ECGRLKA------------------------------------ 130 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~------------------------------------ 130 (434)
..++.|++| +|++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 346788889 78866666 57899999998887 5555442
Q ss_pred ------------------CCccEEEEEEeCC--EE-EEEEcCCeEEEeecC--CCCCceeeEeeeccCCCCceeEEEecc
Q 046226 131 ------------------KTSMVVAMEVSHD--RV-YAAYGDGKIRVWRST--WDNGVKHVKLATIPKTGGAVRNLIVGK 187 (434)
Q Consensus 131 ------------------~~~~v~~l~~~~~--~l-~~~s~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
|...|.+++|+|+ .| ++++.||.|++||+. .++....+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~----------------- 145 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR----------------- 145 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-----------------
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec-----------------
Confidence 3337999999997 54 788889999999998 5555544421
Q ss_pred ccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEE----EcccCccCeEEEEEcCC---C-eEEEEeCCCeE
Q 046226 188 DKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIE----TIQAHSEPINALVVADD---G-VLYSASDDATV 259 (434)
Q Consensus 188 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~-~l~s~~~dg~i 259 (434)
..|...|.+++|+|++++|++|+.+|.|++|++.+++... .+.+|...|.+++|+|+ + +|++++.|+.|
T Consensus 146 ---~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 146 ---FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp ---EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred ---ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 1377899999999999999999999999999998877544 77889999999999999 8 99999999999
Q ss_pred EEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCc-------c-------
Q 046226 260 RVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGA-------L------- 325 (434)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~------- 325 (434)
++||++.. . .......+|...|.+++|+ ++++|++++.|+.|++||++.......+... .
T Consensus 223 ~vwd~~~~--~---~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 223 KISHYPQC--F---IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp EEEEESCT--T---CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--
T ss_pred EEEECCCC--c---eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccc
Confidence 99998721 1 1222255788999999999 9999999999999999999765433222100 0
Q ss_pred -------cCcccceEEEEee--CCEEEEec-CCCcEEEEec--cCCCceeeEEEeeccccceeEEEEeecccCCCCCCcc
Q 046226 326 -------QGHTHAVMCLASV--ANYVISGS-ADSTSRVWAR--EQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 326 -------~~~~~~v~~~~~~--~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 393 (434)
......|.++.+. +++|++++ .|+.|++|++ ..+.....+..+..| +.|.+++|+|+ +
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~---------~ 366 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND---------E 366 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT---------E
T ss_pred cccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC---------c
Confidence 0223467778775 67888888 8999999999 555555777888888 88999999996 5
Q ss_pred cEEEEeec------CCeEEEEecCCC
Q 046226 394 CTICTGSL------DGVLKMWRVTRP 413 (434)
Q Consensus 394 ~~l~s~~~------Dg~v~iw~~~~~ 413 (434)
.++++++. +..|.+|.+...
T Consensus 367 ~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 367 FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEEecccCCCCCCcceEEEEEEcC
Confidence 55555553 556899987654
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.5e-32 Score=238.03 Aligned_cols=293 Identities=12% Similarity=0.062 Sum_probs=202.1
Q ss_pred cceeeeEEEeecccc----EEEEEE--cC---CEEEEEeCCCeEEEecCCCc---eeEeeccCCCccEEEEEEeCC---E
Q 046226 80 SSYRCISSVLKKDGQ----ILCIAV--GN---GFIYTGSDSNVIRIWKQPEF---TECGRLKAKTSMVVAMEVSHD---R 144 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~----v~~~~~--~~---~~l~tg~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~---~ 144 (434)
...+.+..++...+. +.++-| .+ -.++++++ ..|++|+..++ +++++++.|+.+|..+.+.|+ .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 101 (356)
T 2w18_A 23 GNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNL 101 (356)
T ss_dssp -CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSC
T ss_pred ceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccce
Confidence 346667777776553 455555 22 25677764 69999999888 899999999999999999996 3
Q ss_pred EEEEEcCCeEE-EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe--cCCcEEEE
Q 046226 145 VYAAYGDGKIR-VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS--LDKTIKVW 221 (434)
Q Consensus 145 l~~~s~dg~i~-vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~vw 221 (434)
+.++-.+=.+. ++-+... +........+.. .+|...|..+ ++++++.+++ .|+.|++|
T Consensus 102 ~~~~~~~~~~~~v~sla~s-----------pd~~~~~~~l~s-----~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~ 162 (356)
T 2w18_A 102 VCVALGNLEIREIRALFCS-----------SDDESEKQVLLK-----SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVM 162 (356)
T ss_dssp EEEEECSSSEEEEEEECC-----------------CCEEEEE-----EEEEEEEEEE---TTTEEEEEESSSTTCEEEEE
T ss_pred eeeeeccccccceEEEEEC-----------CCccccccEEEe-----CCCeEEEEec---CCCcEEEecccCCCCcEEEE
Confidence 33332221111 1111100 000000000000 1344445544 5566555543 59999999
Q ss_pred Ec-CCCeeEEEcccCccCeEEEEEcC---CC-eEEEEeCCCeEEEEecccccCcceeEEEEEeccc---ccCeEEEEEec
Q 046226 222 RI-RDSKCIETIQAHSEPINALVVAD---DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAK---YSPVKTLTLTL 293 (434)
Q Consensus 222 d~-~~~~~~~~~~~~~~~v~~~~~~~---~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~ 293 (434)
++ .+++.+..+..|...+..++|++ ++ .|++++.|++|++||+. ..+.+..+.+| ...+.+++|+|
T Consensus 163 ~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~------TGk~l~tL~g~~~~v~~v~~vafSp 236 (356)
T 2w18_A 163 TFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK------TGQLLKKMHIDDSYQASVCHKAYSE 236 (356)
T ss_dssp EECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT------TCCEEEEEECCC---CCCEEEEEEE
T ss_pred EECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC------CCcEEEEEcCCCcceeeeEEEEECC
Confidence 99 55888888889999999999998 55 99999999999999997 23344444443 23677889999
Q ss_pred CCCEE------------EEEcCCCeEEEEEcCcccccccccCc-ccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCC
Q 046226 294 DDGLL------------YGGCTDGYIHYWHKGWFSAQLQYGGA-LQGHTHAVMCLASVANYVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 294 ~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 360 (434)
+|.++ ++|+.|++|++||..+......+... ..+|...+.+..+++.++++|+.|++|+|||+.++
T Consensus 237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tG- 315 (356)
T 2w18_A 237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLG- 315 (356)
T ss_dssp TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTC-
T ss_pred CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCC-
Confidence 99876 56788999999998755432221111 24676667777778899999999999999999998
Q ss_pred ceeeEEEeecccccee-EEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 361 RHTMLAVLVGHRGPIR-CAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 361 ~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
+++.++.+|...+. +++|+|+ |++|++|+.|++|+|||+
T Consensus 316 --k~l~tL~gH~~~vvs~vafSPD---------G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 316 --QCTALLPPVSDQHWSFVKWSGT---------DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --SEEEEECCC--CCCCEEEECSS---------SSEEEEECTTSCEEEEEE
T ss_pred --cEEEEecCCCCCeEEEEEECCC---------CCEEEEEECCCcEEEecC
Confidence 88899999988765 5899999 999999999999999996
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.8e-33 Score=252.25 Aligned_cols=290 Identities=10% Similarity=0.071 Sum_probs=205.4
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeC--CEE-EEEEcCCeE
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSH--DRV-YAAYGDGKI 154 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~--~~l-~~~s~dg~i 154 (434)
.+...+.++..|.+.|+|++| +|++|++|+.|+ ++|||+.+++.......+ .+..+++.+ +.+ ++++.|+.|
T Consensus 7 ~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 7 ITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp ------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEE
T ss_pred cccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEE
Confidence 344556667889999999999 899999998775 789999988776655433 355555654 455 567778999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-eeEEEcc
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-KCIETIQ 233 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~ 233 (434)
++||+.+++.+..+ .+...|.+++|+++ .++++. |+.|++||+.++ +.+..+.
T Consensus 84 ~iWd~~~~~~~~~~-----------------------~~~~~v~~v~~~~~--~~~~~~-~~~i~i~d~~~~~~~~~~~~ 137 (355)
T 3vu4_A 84 HIWDDVKKQDVSRI-----------------------KVDAPVKDLFLSRE--FIVVSY-GDVISVFKFGNPWKRITDDI 137 (355)
T ss_dssp EEEETTTTEEEEEE-----------------------ECSSCEEEEEECSS--EEEEEE-TTEEEEEESSTTCCBSSCCE
T ss_pred EEEECCCCcEEEEE-----------------------ECCCceEEEEEcCC--EEEEEE-cCEEEEEECCCCceeeEEec
Confidence 99999877655544 36778999999865 344444 789999999988 6666665
Q ss_pred cCccCeEEEEEcCCCeEEE--EeCCCeEEEEecccccCc---------ceeEE-EEEecccccCeEEEEEecCCCEEEEE
Q 046226 234 AHSEPINALVVADDGVLYS--ASDDATVRVWRRYFYSEN---------QLHTL-ILTLTAKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 234 ~~~~~v~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~---------~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~ 301 (434)
. ....+++++ ..++. |+.||.|++||+...... ..... ...+.+|...|.+++|+|++++|++|
T Consensus 138 ~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 138 R---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp E---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred c---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 4 444556666 54444 689999999998732100 00011 46678999999999999999999999
Q ss_pred cCCCe-EEEEEcCcccccccccCccc-C-cccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEe--------
Q 046226 302 CTDGY-IHYWHKGWFSAQLQYGGALQ-G-HTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVL-------- 368 (434)
Q Consensus 302 ~~dg~-i~i~d~~~~~~~~~~~~~~~-~-~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------- 368 (434)
+.||+ |++||++...... .+. + |...|.+++|+ +++|++++.|+.|++||++..... ....+
T Consensus 214 s~d~~~v~iwd~~~~~~~~----~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~-~~~~~~~~~~~~~ 288 (355)
T 3vu4_A 214 SQDGTIIRVFKTEDGVLVR----EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDN-KRHALKGWINMKY 288 (355)
T ss_dssp ETTCSEEEEEETTTCCEEE----EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCC-CSEETTTTEECCC
T ss_pred eCCCCEEEEEECCCCcEEE----EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCc-ccccccceeeccc
Confidence 99998 9999997554332 343 4 88999999996 679999999999999999765211 11111
Q ss_pred -------------eccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 369 -------------VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 369 -------------~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
..+......++|+++ +.+|++++.||.+++|++..++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~a~~~d---------~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 289 FQSEWSLCNFKLSVDKHVRGCKIAWISE---------SSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp CCCSSCSEEEECCCCTTCCCCEEEESSS---------SEEEEEETTTTEEEEEEEEEETTT
T ss_pred cccccceeEEEeccCCCCCceEEEEeCC---------CCEEEEEeCCCeEEEEEEEcCCCC
Confidence 111223466888888 899999999999999999876543
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9e-33 Score=258.91 Aligned_cols=256 Identities=14% Similarity=0.195 Sum_probs=195.5
Q ss_pred CCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC------------CC
Q 046226 131 KTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM------------GP 196 (434)
Q Consensus 131 ~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 196 (434)
+.+.|.+++|+|+ .|++|+.||.|++||+......... ....... ...+.+|. ..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~-------~~~~~~~----~~~~~~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSH-------SRGEYNV----YSTFQSHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CC-------CCCCEEE----EEEEECCCCEEEGGGTEEECCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcc-------cccceeE----ecccccccccccccccccccCc
Confidence 5789999999997 8999999999999999865421100 0000000 00122576 88
Q ss_pred eEEEEEecCC--CEEEEEecCCcEEEEEcCCCeeE---------------------------------------EE-ccc
Q 046226 197 ITSIAINVSD--DTLYSASLDKTIKVWRIRDSKCI---------------------------------------ET-IQA 234 (434)
Q Consensus 197 v~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~~-~~~ 234 (434)
|.+++|+|++ .+|++++.|+.|++||+.+++.. .. ..+
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 9999999998 79999999999999999764432 12 357
Q ss_pred CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEE-------EecccccCeEEEEEecCC-CEEEEEcCCC
Q 046226 235 HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLIL-------TLTAKYSPVKTLTLTLDD-GLLYGGCTDG 305 (434)
Q Consensus 235 ~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg 305 (434)
|...|.+++|+|++ +|++| .|+.|++||++. ...... .+..|...|.+++|+|++ ++|++|+.||
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEI-----TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTE-----EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCC-----CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 99999999999999 88887 899999999871 122222 356788899999999998 9999999999
Q ss_pred eEEEEEcCcccccccccCcccCccc------------ceEEEEee--CCEEEEecCCCcEEEEeccC-CCceeeEEEeec
Q 046226 306 YIHYWHKGWFSAQLQYGGALQGHTH------------AVMCLASV--ANYVISGSADSTSRVWAREQ-DGRHTMLAVLVG 370 (434)
Q Consensus 306 ~i~i~d~~~~~~~~~~~~~~~~~~~------------~v~~~~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~ 370 (434)
.|++||++...........+.+|.. .|.+++|+ +++|++++. +.|++||++. + .++..+.+
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~---~~~~~~~~ 325 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN---RPVETYQV 325 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS---SCSCCEES
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc---cccceeec
Confidence 9999999865542222344556654 89999986 669999998 9999999987 4 56677778
Q ss_pred cccc---------------eeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 371 HRGP---------------IRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 371 h~~~---------------v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
|... +..++|+|+ +.+|++|+.||.|++||+.+++..
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~---------~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGS---------DSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTT---------SSEEEEECSTTEEEEEETTTCCEE
T ss_pred cccccccccccccccccccceEEEECCC---------CCEEEEeccCCEEEEEEcCCCcce
Confidence 8643 234899998 899999999999999999987653
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=281.14 Aligned_cols=256 Identities=18% Similarity=0.216 Sum_probs=210.1
Q ss_pred eeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 126 GRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 126 ~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
..+.+|.+.|++++|+|+ .+++|+.||.|++||+..+...... .+.+|.+.|.+++|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~--------------------~l~~h~~~V~~l~~s 62 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--------------------TLTGHEGPVWRVDWA 62 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEE--------------------EECCCSSCEEEEEEC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccce--------------------eccCCcCceEEEEec
Confidence 457899999999999987 7999999999999998633211111 123699999999999
Q ss_pred cC--CCEEEEEecCCcEEEEEcCCCe--eEEEcccCccCeEEEEEcCC--C-eEEEEeCCCeEEEEecccccCcceeEEE
Q 046226 204 VS--DDTLYSASLDKTIKVWRIRDSK--CIETIQAHSEPINALVVADD--G-VLYSASDDATVRVWRRYFYSENQLHTLI 276 (434)
Q Consensus 204 ~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 276 (434)
++ +++|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + .+++|+.||.|++||++.... ...
T Consensus 63 ~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~----~~~ 138 (753)
T 3jro_A 63 HPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT----TSP 138 (753)
T ss_dssp CTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC----CCC
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC----cce
Confidence 88 9999999999999999999987 77888889999999999998 7 999999999999999983211 122
Q ss_pred EEecccccCeEEEEEec-------------CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee-----
Q 046226 277 LTLTAKYSPVKTLTLTL-------------DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV----- 338 (434)
Q Consensus 277 ~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~----- 338 (434)
.....|...|.+++|+| ++.+|++|+.||.|++||++...........+.+|...|.+++|+
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 34567889999999999 589999999999999999986655545556777899999999986
Q ss_pred CCEEEEecCCCcEEEEeccCCCce--eeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 339 ANYVISGSADSTSRVWAREQDGRH--TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 339 ~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
+++|++|+.||.|++||+.++... ..+.....|.+.|++++|+|+ +.+|++|+.||.|++|++..+.
T Consensus 219 ~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd---------g~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 219 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTT---------TCCEEEECSSSCEECCBCCSSS
T ss_pred CCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCC---------CCEEEEEcCCCEEEEEecCCCC
Confidence 568999999999999999886321 133344568999999999999 8999999999999999998654
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-32 Score=255.56 Aligned_cols=261 Identities=16% Similarity=0.172 Sum_probs=205.7
Q ss_pred eeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE
Q 046226 126 GRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202 (434)
Q Consensus 126 ~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 202 (434)
.....|.+.|++++|+|+ .+++++.||.|++||+........ .......... +.+|...|.+++|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----~~~~~~~~~~-------~~~h~~~v~~l~~ 189 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----PSGECQPDLR-------LRGHQKEGYGLSW 189 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----TTCCCCCSEE-------EECCSSCCCCEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----ccccCCCcEE-------ecCCCCCeEEEEe
Confidence 345578999999999996 688888899999999975311100 0000111111 1269999999999
Q ss_pred ecCCC-EEEEEecCCcEEEEEcCCCee-------EEEcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccccCcce
Q 046226 203 NVSDD-TLYSASLDKTIKVWRIRDSKC-------IETIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYFYSENQL 272 (434)
Q Consensus 203 ~~~~~-~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~ 272 (434)
+|++. +|++|+.||.|++||+.++.. ...+..|...|.+++|+|+ + +|++++.||.|++||++....
T Consensus 190 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~--- 266 (430)
T 2xyi_A 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT--- 266 (430)
T ss_dssp CTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS---
T ss_pred CCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC---
Confidence 99988 999999999999999987322 4566789999999999994 4 899999999999999983211
Q ss_pred eEEEEEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC---CEEEEecCC
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA---NYVISGSAD 348 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~d 348 (434)
......+..|...|++++|+|++. +|++|+.||.|++||++.... ....+..|...|.++.|++ .+|++++.|
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 123334457889999999999887 688999999999999975332 2345667899999999973 379999999
Q ss_pred CcEEEEeccCCCc-----------eeeEEEeeccccceeEEEEeecccCCCCCCccc-EEEEeecCCeEEEEecCCC
Q 046226 349 STSRVWAREQDGR-----------HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYC-TICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 349 g~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~-~l~s~~~Dg~v~iw~~~~~ 413 (434)
|.|+|||+..... ...+..+.+|...|++++|+|+ +. +|++++.||.|+||++...
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---------~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---------EPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECHH
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCC---------CCCEEEEEECCCCEEEeEcccc
Confidence 9999999987321 2577788899999999999999 67 9999999999999999754
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-32 Score=247.45 Aligned_cols=264 Identities=13% Similarity=0.155 Sum_probs=208.0
Q ss_pred EEecCCCceeEeeccCCCccEEEEEEeCC-----EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEecccc
Q 046226 115 RIWKQPEFTECGRLKAKTSMVVAMEVSHD-----RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDK 189 (434)
Q Consensus 115 ~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (434)
..|+....+.+..+.+|...|.+++|+|+ .|++++.||.|++||+..........
T Consensus 22 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------- 81 (368)
T 3mmy_A 22 TTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKA-------------------- 81 (368)
T ss_dssp -CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEE--------------------
T ss_pred ccCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEE--------------------
Confidence 34566677788889999999999999985 68899999999999998632221111
Q ss_pred ccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEE--cCCC-eEEEEeCCCeEEEEeccc
Q 046226 190 MMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVV--ADDG-VLYSASDDATVRVWRRYF 266 (434)
Q Consensus 190 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~-~l~s~~~dg~i~iwd~~~ 266 (434)
+.+|...|.+++|+|++++|++++.||.|++||+++++.+. +..|...|.+++| ++++ +|++++.||.|++||++.
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 12599999999999999999999999999999999988766 5569999999999 8888 899999999999999872
Q ss_pred ccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC----EE
Q 046226 267 YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN----YV 342 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~l 342 (434)
. .....+..+ ..+.++.+. ...+++++.++.+.+||++..............+...+.++.+++. .+
T Consensus 161 ~------~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 161 S------NPMMVLQLP-ERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp S------SCSEEEECS-SCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred C------cEEEEEecC-CCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 2 122223333 355555555 4688899999999999998665544444444455555566665544 39
Q ss_pred EEecCCCcEEEEeccCCCceeeEEEeecccc------------ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 343 ISGSADSTSRVWAREQDGRHTMLAVLVGHRG------------PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 343 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~------------~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
++++.||.|++||++.......+..+.+|.. .|++++|+|+ +.+|++++.||.|++||+
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV---------HGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTT---------TCCEEEEETTSCEEEEET
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecC---------CCEEEEEccCCeEEEEEC
Confidence 9999999999999998754456667777776 7999999998 899999999999999999
Q ss_pred CCCCccc
Q 046226 411 TRPKSSC 417 (434)
Q Consensus 411 ~~~~~~~ 417 (434)
.+++.+.
T Consensus 303 ~~~~~~~ 309 (368)
T 3mmy_A 303 DARTKLK 309 (368)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9886543
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=254.63 Aligned_cols=323 Identities=14% Similarity=0.116 Sum_probs=221.1
Q ss_pred CCCcccccCCCCCCCCCC-CCCccCCCCCCCcccceeeeE-----EE-------------eeccccEEEEEE---cCCEE
Q 046226 48 SSPISLHTSPLSSPRHPF-NPTAAAGSSSPETSSSYRCIS-----SV-------------LKKDGQILCIAV---GNGFI 105 (434)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~-------------~~h~~~v~~~~~---~~~~l 105 (434)
...+..|...+.+..+.+ ++..+++++.+..+..|+... .+ .+|.+.|.+++| ++++|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 345567889999999988 999999999998888776632 12 249999999999 56799
Q ss_pred EEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-----EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCce
Q 046226 106 YTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-----RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV 180 (434)
Q Consensus 106 ~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 180 (434)
++++.||.|++||+.+++....+. +...+.++.+.+. .+++++.|+.|++||+..++....+.
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------- 183 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ----------- 183 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-----------
T ss_pred EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-----------
Confidence 999999999999999998888776 6778999999873 79999999999999998776555442
Q ss_pred eEEEeccccccCcCCCeEEEEEecCCC-EEEEEecCCcEEEEEcCCCe-eEEEc---------------ccCccCeEEEE
Q 046226 181 RNLIVGKDKMMKHMGPITSIAINVSDD-TLYSASLDKTIKVWRIRDSK-CIETI---------------QAHSEPINALV 243 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~-~~~~~---------------~~~~~~v~~~~ 243 (434)
.|...|.+++|+|+++ +|++|+.||.|++||++++. .+..+ ..|...|.+++
T Consensus 184 -----------~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 184 -----------GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp -----------CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred -----------CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 5999999999999998 58899999999999998765 34443 56888999999
Q ss_pred EcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccccc
Q 046226 244 VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYG 322 (434)
Q Consensus 244 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 322 (434)
|+|++ +|++++.||.|++||+............ ........+........+..+++++.++.|++||+..... .
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~----~ 327 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGK-VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ----I 327 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCC-CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE----E
T ss_pred EcCCCCEEEEecCCCeEEEEECCCCccceecccc-ccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc----e
Confidence 99999 9999999999999998732211110000 0001111222222233456677778899999999875433 3
Q ss_pred CcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEee
Q 046226 323 GALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 323 ~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
..+.+|...|.+++|+ +++|++++.||.|++||+.+. +.+.....+.. ...+.+.. ...+.+.+
T Consensus 328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~---~~~~~~~~~~~---~~~~~~~~--------~~~~~~~~ 393 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY---EPVPDDDETTT---KSQLNPAF--------EDAWSSSD 393 (408)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC---CccCCCCceEe---cccccccc--------ceeecccC
Confidence 4566899999999986 569999999999999999987 33333322221 12233321 44667788
Q ss_pred cCCeEEEEecCC
Q 046226 401 LDGVLKMWRVTR 412 (434)
Q Consensus 401 ~Dg~v~iw~~~~ 412 (434)
.|+.+++|+...
T Consensus 394 ~~~~~~~W~~~~ 405 (408)
T 4a11_B 394 EEGGTSAWSHPQ 405 (408)
T ss_dssp ------------
T ss_pred ccCceeecCCcc
Confidence 899999998663
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.2e-33 Score=256.85 Aligned_cols=267 Identities=17% Similarity=0.195 Sum_probs=210.2
Q ss_pred CccCCCCCCCcccceee---------eEEEeeccccEEEEEE---cCCEEEEEeCCCeEEEecCCCc-------eeEeec
Q 046226 68 TAAAGSSSPETSSSYRC---------ISSVLKKDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEF-------TECGRL 128 (434)
Q Consensus 68 ~~~~~~~~~~~~~~~~~---------~~~~~~h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~-------~~~~~~ 128 (434)
..+++++.++.+..|+. +..+.+|.+.|++++| ++++|++|+.||.|+|||+.++ +.+..+
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE
T ss_pred EEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe
Confidence 34445666777666653 3457789999999999 6789999999999999999887 567788
Q ss_pred cCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC
Q 046226 129 KAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS 205 (434)
Q Consensus 129 ~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 205 (434)
.+|...|.+++|+|+ .+++++.||.|++||+.+++....+. ...|...|.+++|+|+
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--------------------PDVHPDTIYSVDWSRD 187 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--------------------TTTCCSCEEEEEECTT
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--------------------cCCCCCceEEEEECCC
Confidence 899999999999986 68999999999999998765443331 0259999999999999
Q ss_pred CCEEEEEecCCcEEEEEcCCCeeEEEc-ccCccC-eEEEEEcCCC-eEEEE---eCCCeEEEEecccccCcceeEEEEEe
Q 046226 206 DDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEP-INALVVADDG-VLYSA---SDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 206 ~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~-~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
+++|++++.||.|++||+++++.+..+ ..|.+. +.++.|+|++ +|++| +.|+.|++||++..... .....
T Consensus 188 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~----~~~~~ 263 (402)
T 2aq5_A 188 GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP----LSLQE 263 (402)
T ss_dssp SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC----SEEEE
T ss_pred CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC----ceEEe
Confidence 999999999999999999999999988 678765 8999999999 77777 69999999999832211 11112
Q ss_pred cccccCeEEEEEecCCCEEE-EEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 280 TAKYSPVKTLTLTLDDGLLY-GGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 280 ~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
..+...+.+++|+|++++|+ +|+.||.|++||+.............. |...|.+++|+++..+.++.++.+++|++.+
T Consensus 264 ~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 264 LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKRGLEVNKCEIARFYKLHE 342 (402)
T ss_dssp CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGGGSCGGGTEEEEEEEEET
T ss_pred ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEecccccceecceeEEEEEcCC
Confidence 24567899999999999986 566799999999976543222222222 5578999999765333345677999999987
Q ss_pred C
Q 046226 359 D 359 (434)
Q Consensus 359 ~ 359 (434)
+
T Consensus 343 ~ 343 (402)
T 2aq5_A 343 R 343 (402)
T ss_dssp T
T ss_pred C
Confidence 5
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.7e-33 Score=257.54 Aligned_cols=254 Identities=14% Similarity=0.122 Sum_probs=193.9
Q ss_pred eEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE
Q 046226 124 ECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI 200 (434)
Q Consensus 124 ~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 200 (434)
.......|...|++|+|+|. .|++|+.||.|+|||+..++...... +.+|.+.|++|
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~--------------------~~gH~~~V~~l 170 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK--------------------GIGAGGSITGL 170 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC--------------------CCSSSCCCCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE--------------------ccCCCCCEEEE
Confidence 33445678889999999983 79999999999999998765443331 23699999999
Q ss_pred EEec-CCCEEEEEecCCcEEEEEcCCCeeEEEccc--CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEE
Q 046226 201 AINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQA--HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLI 276 (434)
Q Consensus 201 ~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 276 (434)
+|+| ++++|++|+.||+|++||++++........ +...+.+++|++++ +|++|+.||.|++||++. ...
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-------~~~ 243 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-------KEL 243 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-------CBC
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-------cee
Confidence 9998 688999999999999999987654333332 34467899999999 999999999999999861 123
Q ss_pred EEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEE
Q 046226 277 LTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRV 353 (434)
Q Consensus 277 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~i 353 (434)
..+..|...|.+++|+|++. +|++|+.|+.|++||++.......+ ....+|...|.+++|+ +++|++++.||.|+|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF-LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC-SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE-EEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 45678999999999999876 7889999999999999765544332 2345789999999986 679999999999999
Q ss_pred EeccCCCceeeEEEeecccc------ceeEEEEeecccCCCCCCcccEEEEe------------ecCCeEEEEecCCCCc
Q 046226 354 WAREQDGRHTMLAVLVGHRG------PIRCAIAFLGRFGEETEDEYCTICTG------------SLDGVLKMWRVTRPKS 415 (434)
Q Consensus 354 wd~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~~~~~~~~~l~s~------------~~Dg~v~iw~~~~~~~ 415 (434)
||+.++ .....+..|.. .+..+.|+|+ +.+++++ ..++.|++||..+++.
T Consensus 323 wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 323 YSASQW---DCPLGLIPHPHRHFQHLTPIKAAWHPR---------YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EESSSS---SSEEEECCCCCCCCSSSCCCBCEECSS---------SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred EECCCC---ccceEEecccccccccceeEEEEEcCC---------CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 999987 44444444432 1233455555 3344433 3456899999998875
Q ss_pred cc
Q 046226 416 SC 417 (434)
Q Consensus 416 ~~ 417 (434)
..
T Consensus 391 ~~ 392 (435)
T 4e54_B 391 MC 392 (435)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.8e-32 Score=245.61 Aligned_cols=306 Identities=14% Similarity=0.157 Sum_probs=221.3
Q ss_pred CCCCcccccCCCCCCCCCCCCCccCCCCCCCccccee---------eeEEEeeccccEEEEEE----cCCEEEEEeCCCe
Q 046226 47 FSSPISLHTSPLSSPRHPFNPTAAAGSSSPETSSSYR---------CISSVLKKDGQILCIAV----GNGFIYTGSDSNV 113 (434)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~~~v~~~~~----~~~~l~tg~~dg~ 113 (434)
....+.+|...+.+..+.+++..+++++.+..++.|+ .+..+.+|.+.|++++| ++++|++|+.||.
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 3455678999999999999999999999999888774 45667899999999999 2899999999999
Q ss_pred EEEecCCCc---------eeEeeccCCCccEEEEEEeCC----EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCce
Q 046226 114 IRIWKQPEF---------TECGRLKAKTSMVVAMEVSHD----RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAV 180 (434)
Q Consensus 114 i~iwd~~~~---------~~~~~~~~~~~~v~~l~~~~~----~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 180 (434)
|++||+.++ +.+..+..|...|.+++|+|+ .+++++.||.|++||+...+.+..+......
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~------ 156 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM------ 156 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE------
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc------
Confidence 999999876 667888899999999999975 7999999999999999888766554432110
Q ss_pred eEEEeccccccCcCCCeEEEEEecC---CCEEEEEecCCcEEEEEcCCCee--EEEcccCccCeEEEEEcCCC-----eE
Q 046226 181 RNLIVGKDKMMKHMGPITSIAINVS---DDTLYSASLDKTIKVWRIRDSKC--IETIQAHSEPINALVVADDG-----VL 250 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~-----~l 250 (434)
.........|...+.+++|+|+ +.+|++++.|+.+.+|+...++. +..+.+|...|.+++|+|++ +|
T Consensus 157 ---~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 157 ---KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp ---ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ---cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 0001111258889999999997 89999999999998888877764 77888899999999999995 79
Q ss_pred EEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc----CCCeEEEEEcCcccccccccCccc
Q 046226 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC----TDGYIHYWHKGWFSAQLQYGGALQ 326 (434)
Q Consensus 251 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~ 326 (434)
++++.||.|++||++.... .................+....+..+. ....+.+|+. ........+.
T Consensus 234 ~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 303 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLS------PLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSN----LQVELLSEHD 303 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------------CCS----EEEEEEEEEC
T ss_pred EEEcCCCeEEEEeCCCCcC------ccccCCcccceeccCCCcccccccccccccccceeeeeccc----ccccEEEEEe
Confidence 9999999999999882211 111111222233333333333333333 2334444442 2334445667
Q ss_pred CcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeecc
Q 046226 327 GHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 327 ~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h 371 (434)
+|...|.+++|+ +++|++++.||.|++||+.++....++..+..|
T Consensus 304 ~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 304 DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC--
T ss_pred cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehccc
Confidence 899999999996 669999999999999999998777777776655
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-32 Score=255.60 Aligned_cols=254 Identities=17% Similarity=0.239 Sum_probs=208.0
Q ss_pred EEEeeccccEEEEEE--c-CCEEEEEeCCCeEEEecCCC----------ceeEeeccCCCccEEEEEEeCC---EEEEEE
Q 046226 86 SSVLKKDGQILCIAV--G-NGFIYTGSDSNVIRIWKQPE----------FTECGRLKAKTSMVVAMEVSHD---RVYAAY 149 (434)
Q Consensus 86 ~~~~~h~~~v~~~~~--~-~~~l~tg~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~l~~~~~---~l~~~s 149 (434)
.....|.+.|++++| + +.+|++|+.||.|++||+.+ ...+..+.+|...|.+++|+|+ .|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 456779999999999 3 67999999999999999976 5777888899999999999986 799999
Q ss_pred cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEEcCCC--
Q 046226 150 GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWRIRDS-- 226 (434)
Q Consensus 150 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~-- 226 (434)
.||.|++||+.......... .....+.+|...|.+++|+| ++.+|++++.||.|++||++++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~---------------~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVI---------------DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEE---------------ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred CCCeEEEEeCCCCCCCCcee---------------ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 99999999998643321110 00112236999999999999 6789999999999999999987
Q ss_pred -eeEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCC-EEEEEc
Q 046226 227 -KCIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGC 302 (434)
Q Consensus 227 -~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 302 (434)
+.+..+..|...|++++|+|++ ++++|+.||.|++||++.. ......+..|...|.+++|+|++. +|++++
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~-----~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-----KLKLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT-----TSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC-----CCCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 5777888899999999999988 6889999999999999821 123445667889999999999885 699999
Q ss_pred CCCeEEEEEcCccccc----------ccccCcccCcccceEEEEeeC--C-EEEEecCCCcEEEEeccCC
Q 046226 303 TDGYIHYWHKGWFSAQ----------LQYGGALQGHTHAVMCLASVA--N-YVISGSADSTSRVWAREQD 359 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~--~-~l~s~~~dg~i~iwd~~~~ 359 (434)
.||.|++||+...... ........+|...|.+++|++ . +|++++.||.|+||++...
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999999999753211 233445668889999999974 4 8999999999999998753
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=5.2e-32 Score=248.95 Aligned_cols=234 Identities=12% Similarity=0.092 Sum_probs=171.4
Q ss_pred EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec--------CCCEEEEEecC
Q 046226 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV--------SDDTLYSASLD 215 (434)
Q Consensus 144 ~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~s~~~d 215 (434)
.+++++.|++|++||+..++......+. .+.+|.+.|++++|+| ++++|++|+.|
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~-----------------~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLG-----------------GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEEC-----------------TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeec-----------------ccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 6889999999999998766443322211 2347999999999998 78999999999
Q ss_pred CcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeE-------------------
Q 046226 216 KTIKVWRIRDSKCIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHT------------------- 274 (434)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~------------------- 274 (434)
++|+|||+.++.++..+..|...|.+++|+|++ +|++++.|+.|++||++.........
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 999999999988888888899999999999987 79999999999999987322111100
Q ss_pred EEEEecccccCeEEEEEe-cCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccce-------------------EE
Q 046226 275 LILTLTAKYSPVKTLTLT-LDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAV-------------------MC 334 (434)
Q Consensus 275 ~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v-------------------~~ 334 (434)
......+|...+.++.|+ ++++.|++++.|+.+++||+........ +..|...+ .+
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNE----ISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSCSEEEECSSCCSSCC
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCce----EeeecCccccEEEccccccccccCcceeE
Confidence 011234567788899987 7999999999999999999865432221 11222211 11
Q ss_pred EEe---eCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 335 LAS---VANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 335 ~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
+.+ ++.++++|+.||.|++||+.++ .+...+.+|..+|++++|+|+ |++||+++.|| +.+|++.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~---~~~~~~~~~~~~V~svafspd---------G~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEK---DSNSIPIQLGMPIVDFCWHQD---------GSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCT---TCCEEEEECSSCEEEEEECTT---------SSEEEEEESSE-EEEEEEG
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCC---cEEEEecCCCCcEEEEEEcCC---------CCEEEEEeCCC-eEEEEEe
Confidence 111 1236788999999999999987 556667789999999999999 99999998766 6666654
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.3e-32 Score=243.49 Aligned_cols=257 Identities=12% Similarity=0.101 Sum_probs=203.3
Q ss_pred eeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 126 GRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 126 ~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
....+|...|.+++|+|+ .|++++.||.|++||+........... ..+|...|.+++|+
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~~ 65 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ-------------------SLRYKHPLLCCNFI 65 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE-------------------EEECSSCEEEEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccccee-------------------eeecCCceEEEEEC
Confidence 345689999999999987 899999999999999976652211110 11599999999999
Q ss_pred cCCC-EEEEEecCCcEEEEEc-CCCeeEEEccc--CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcce---eEE
Q 046226 204 VSDD-TLYSASLDKTIKVWRI-RDSKCIETIQA--HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQL---HTL 275 (434)
Q Consensus 204 ~~~~-~l~s~~~dg~i~vwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~---~~~ 275 (434)
|+++ +|++|+.||.|++||+ .+++. ..+.. |...|.+++|+| + .+++++.|+.|++||++....... ...
T Consensus 66 ~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (342)
T 1yfq_A 66 DNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp ESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred CCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe
Confidence 9999 9999999999999999 77754 77888 999999999999 6 999999999999999883111100 111
Q ss_pred EEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCc-ccccccccCcccCcccceEEEEee---CCEEEEecCCCcE
Q 046226 276 ILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGW-FSAQLQYGGALQGHTHAVMCLASV---ANYVISGSADSTS 351 (434)
Q Consensus 276 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~i 351 (434)
...+. +...+.+++|++++ +++++.|+.|++||++. ...... .....|...+.+++++ ++++++++.||.|
T Consensus 144 ~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i 218 (342)
T 1yfq_A 144 SNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGT--IEESGLKYQIRDVALLPKEQEGYACSSIDGRV 218 (342)
T ss_dssp SSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCE--EEECSCSSCEEEEEECSGGGCEEEEEETTSEE
T ss_pred eeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccce--eeecCCCCceeEEEECCCCCCEEEEEecCCcE
Confidence 22233 77889999999876 99999999999999975 332211 1234677789998886 4699999999999
Q ss_pred EEEeccCCC---ceeeEEEeecccc---------ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 352 RVWAREQDG---RHTMLAVLVGHRG---------PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 352 ~iwd~~~~~---~~~~~~~~~~h~~---------~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
++|+++... .......+..|.. .|.+++|+|+ +.+|++++.||.|++||+.+++...
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---------~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR---------HKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT---------TCCEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCC---------CCEEEEecCCceEEEEcCccHhHhh
Confidence 999998751 0145566677755 9999999998 8999999999999999999887543
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-31 Score=234.47 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=209.2
Q ss_pred ccCCCCCCCcccce-----eeeEEEe--eccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEE
Q 046226 69 AAAGSSSPETSSSY-----RCISSVL--KKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAME 139 (434)
Q Consensus 69 ~~~~~~~~~~~~~~-----~~~~~~~--~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~ 139 (434)
.++. +.|.+++.| +++..+. +|...|++++| ++++|++|+.||+|++||+++++.+..+.+|...+.++.
T Consensus 38 ~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 38 VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 3443 346666555 4566654 67889999999 899999999999999999999999999999999999999
Q ss_pred EeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEE
Q 046226 140 VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIK 219 (434)
Q Consensus 140 ~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 219 (434)
+.+..+++++.++.+++|+.......... +.+|...+.++.+.+++++|++++.||.|+
T Consensus 117 ~~~~~l~s~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 175 (318)
T 4ggc_A 117 WNSYILSSGSRSGHIHHHDVRVAEHHVAT---------------------LSGHSQEVCGLRWAPDGRHLASGGNDNLVN 175 (318)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEEEE---------------------EECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCCCEEEEEecCCceEeeecCCCceeEEE---------------------EcCccCceEEEEEcCCCCEEEEEecCccee
Confidence 99999999999999999998755432221 126999999999999999999999999999
Q ss_pred EEEcCCCee----EEEcccCccCeEEEEEcCCC--e--EEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEE
Q 046226 220 VWRIRDSKC----IETIQAHSEPINALVVADDG--V--LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTL 291 (434)
Q Consensus 220 vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~--~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 291 (434)
+||+++++. ......+.+.|.++.+.+++ . +++++.++.|++||... ... .....+...+..+.|
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~------~~~-~~~~~~~~~v~~~~~ 248 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS------GAC-LSAVDAHSQVCSILW 248 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT------CCE-EEEEECSSCEEEEEE
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc------ccc-cccccceeeeeeeee
Confidence 999987653 34455678899999999877 2 34667889999999871 111 122345678999999
Q ss_pred ecCCCEEEEEc--CCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 292 TLDDGLLYGGC--TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 292 ~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
++++..+++++ .|+.|++||++... ....+.+|...|.+++|+ +++|++|+.||+|+|||+.+.
T Consensus 249 ~~~~~~~~~~sg~~d~~i~iwd~~~~~----~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 249 SPHYKELISGHGFAQNQLVIWKYPTMA----KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cccccceEEEEEcCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999887654 79999999987543 334567999999999996 669999999999999999764
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=254.35 Aligned_cols=289 Identities=11% Similarity=0.046 Sum_probs=218.0
Q ss_pred CCCCCCCCCCCCCccCCCCCCCcccceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeecc-CCC
Q 046226 56 SPLSSPRHPFNPTAAAGSSSPETSSSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLK-AKT 132 (434)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-~~~ 132 (434)
..+.+..++++++.+++++.|.+++..+....+.+|.+.|.+++| +| .++ .|++.+++....+. .|.
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-------~~~---~~~~~~~~~~~~~~~~~~ 85 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-------FEN---KLDFELAQQNGLLNSQPV 85 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-------CCC---TTTTSCCCSSCSSTTSCS
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-------Ccc---eEEEEeCCCceEeecCCC
Confidence 557778889999999999999999866666667899999999999 44 344 45544444333333 458
Q ss_pred ccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC-----CCeEEEEEecC
Q 046226 133 SMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM-----GPITSIAINVS 205 (434)
Q Consensus 133 ~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~ 205 (434)
..|.+++|+|+ .|++++.||.|++||... ....+ .|. ..|.+++|+||
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l-----------------------~~~~~~~~~sv~svafSPD 140 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL-----------------------DSKGNLSSRTYHCFEWNPI 140 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC-----------------------CCSSCSTTTCEEEEEECSS
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec-----------------------cCCCccccccEEEEEEcCC
Confidence 89999999998 899999999999999543 11111 133 35999999999
Q ss_pred CCEEEEEecCCcEEEEEcCCCe-------eEEEc----ccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeE
Q 046226 206 DDTLYSASLDKTIKVWRIRDSK-------CIETI----QAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHT 274 (434)
Q Consensus 206 ~~~l~s~~~dg~i~vwd~~~~~-------~~~~~----~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 274 (434)
|++|++|+.||+|++||+.+++ .+.++ .+|...|.+++|+|++ +++++.|+.|++||+.. .....
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~---~~~~~ 216 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSA---SSHQP 216 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCS---SSSCC
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCC---Ccccc
Confidence 9999999999999999999875 35666 5678899999999999 99999999999999872 12111
Q ss_pred EEEEe-cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEe--eCC--EEEEecCCC
Q 046226 275 LILTL-TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VAN--YVISGSADS 349 (434)
Q Consensus 275 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~--~l~s~~~dg 349 (434)
....+ .+|...|.+++|+ ++.|++++ ++.|++||+....... ...+|...|..+++ +++ .+++++.||
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~----~~~gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISS----LKTGSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEE----EECSCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEE----EEcCCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 22233 3677899999999 68899887 6999999986443311 11279999999998 644 899999999
Q ss_pred cEEEEeccC-----CCc---------------eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 350 TSRVWAREQ-----DGR---------------HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 350 ~i~iwd~~~-----~~~---------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
+ ++|..+. ... ...+..+.+ ...|.+++++|+ |+.+|+++.
T Consensus 290 ~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPd---------G~~lA~~~~ 350 (588)
T 2j04_A 290 Y-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPD---------GYSIAIVYD 350 (588)
T ss_dssp E-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTT---------SSEEEEEEE
T ss_pred C-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCC---------CCEEEEEEe
Confidence 9 9998631 100 011222222 556999999999 999998873
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-29 Score=236.52 Aligned_cols=281 Identities=12% Similarity=0.042 Sum_probs=218.4
Q ss_pred eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEe-----eccCCCccEEEEEEeCC--EEEEEEcCCe
Q 046226 83 RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECG-----RLKAKTSMVVAMEVSHD--RVYAAYGDGK 153 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~-----~~~~~~~~v~~l~~~~~--~l~~~s~dg~ 153 (434)
+.+..+..+. .+.+++| ++.++++++.|+.|++||+.+++... .+.+|...|.+++|+++ .+++++.|+.
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 4455555444 4568888 67788888889999999999988877 45678899999999876 6778888999
Q ss_pred EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEc
Q 046226 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETI 232 (434)
Q Consensus 154 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~ 232 (434)
|++||+.+++....+. .|...+.+++|+|++++++++ +.|+.|++||+++++.+..+
T Consensus 193 v~~~d~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 193 VHVFDLKTLAYKATVD----------------------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEETTTCCEEEEEE----------------------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred EEEEECCCceEEEEEc----------------------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 9999998765554442 488899999999999988654 47999999999999988888
Q ss_pred ccCccCeEEEEEcCCC-eEEEEe--------CCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE-EEEc
Q 046226 233 QAHSEPINALVVADDG-VLYSAS--------DDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL-YGGC 302 (434)
Q Consensus 233 ~~~~~~v~~~~~~~~~-~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~ 302 (434)
..+ ..+.+++|+|++ .+++++ .|+.|++||+.. . ..... ..+...+..++|+|+++.+ ++++
T Consensus 251 ~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~----~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 251 DKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK--E----KLIDT-IGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp CCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT--T----EEEEE-EEEEECEEEEEECSSTTEEEEEET
T ss_pred cCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC--C----cEEee-ccCCCCcceEEECCCCCEEEEEec
Confidence 754 458999999999 777777 588999999872 1 12222 2344578899999999755 6668
Q ss_pred CCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecC---------------CCcEEEEeccCCCceeeE
Q 046226 303 TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSA---------------DSTSRVWAREQDGRHTML 365 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~ 365 (434)
.|+.|++||+........ + .+...+.+++++ ++++++++. ||.|++||+.++ +.+
T Consensus 323 ~~~~v~v~d~~~~~~~~~----~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~ 394 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKS----I-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVK 394 (433)
T ss_dssp TTTEEEEEETTTTEEEEE----E-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEE
T ss_pred CCCEEEEEECCCCcEEEE----e-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEE
Confidence 999999999875433322 2 244567788886 567777765 579999999887 666
Q ss_pred EEeeccccceeEEEEeecccCCCCCCcccEEEEeec-CCeEEEEecCC
Q 046226 366 AVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL-DGVLKMWRVTR 412 (434)
Q Consensus 366 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~-Dg~v~iw~~~~ 412 (434)
..+.. ...+.+++|+|+ +++|++++. |+.|++|+++.
T Consensus 395 ~~~~~-~~~~~~~~~s~d---------g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 395 EFWEA-GNQPTGLDVSPD---------NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEC-SSSEEEEEECTT---------SCEEEEEETTTTEEEEEEETT
T ss_pred EEecC-CCCCceEEEcCC---------CCEEEEEECCCCeEEEEEecC
Confidence 66665 457899999999 888887775 99999999863
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1e-29 Score=233.91 Aligned_cols=264 Identities=13% Similarity=0.062 Sum_probs=207.8
Q ss_pred CEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EE-EEEEcCCeEEEeecCCCCCceeeEeeeccCCCCc
Q 046226 103 GFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RV-YAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGA 179 (434)
Q Consensus 103 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 179 (434)
.++++++.|+.|++||+.+++.+..+..|.. +.+++|+|+ .+ ++++.|+.|++||+.+++....+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---------- 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---------- 71 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE----------
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE----------
Confidence 4688899999999999999999998887754 899999997 45 556689999999998765544442
Q ss_pred eeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eE-EEEeCC
Q 046226 180 VRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL-YSASDD 256 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~d 256 (434)
+...+.+++|+|++++|+++ ..++.|++||+.+++.+..+..+ ..+.+++|+|++ .+ ++++.|
T Consensus 72 -------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 72 -------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp -------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTT
T ss_pred -------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCC
Confidence 34489999999999988654 46799999999999988887754 568999999999 55 788889
Q ss_pred CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE-EEEcCCCeEEEEEcCcccccccccCcccCcccceEEE
Q 046226 257 ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL-YGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL 335 (434)
Q Consensus 257 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 335 (434)
+.|++||+. .......+..+ ..+..++|+|++++| ++++.++.|++||++....... + .+...+.++
T Consensus 138 ~~v~~~d~~------~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~----~-~~~~~~~~~ 205 (391)
T 1l0q_A 138 KTVSVINTV------TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT----V-KVEAAPSGI 205 (391)
T ss_dssp TEEEEEETT------TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE----E-ECSSEEEEE
T ss_pred CEEEEEECC------CCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE----E-ecCCCccce
Confidence 999999987 12233333333 467999999999887 5778899999999875543322 2 234467777
Q ss_pred Eee--CCEEEEec---CCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEE-EEeecCCeEEEEe
Q 046226 336 ASV--ANYVISGS---ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTI-CTGSLDGVLKMWR 409 (434)
Q Consensus 336 ~~~--~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l-~s~~~Dg~v~iw~ 409 (434)
+++ +++|++++ .++.|++||+.++ +.+..+..|. .+.+++|+|+ +++| ++++.|+.|++||
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~~-~~~~~~~s~d---------g~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTN---KITARIPVGP-DPAGIAVTPD---------GKKVYVALSFXNTVSVID 272 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTT---EEEEEEECCS-SEEEEEECTT---------SSEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCC---eEEEEEecCC-CccEEEEccC---------CCEEEEEcCCCCEEEEEE
Confidence 775 66788777 6899999999987 6677777765 4788999998 7666 7778999999999
Q ss_pred cCCCCcc
Q 046226 410 VTRPKSS 416 (434)
Q Consensus 410 ~~~~~~~ 416 (434)
+.+++..
T Consensus 273 ~~~~~~~ 279 (391)
T 1l0q_A 273 TATNTIT 279 (391)
T ss_dssp TTTTEEE
T ss_pred CCCCcEE
Confidence 9987643
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=236.57 Aligned_cols=244 Identities=10% Similarity=0.065 Sum_probs=192.5
Q ss_pred eeccccEEEEEE--cCCEE-EEEeCCCeEEEecCC--CceeEeecc--CCCccEEEEEEeCC--EEEEEEcCCeEEEeec
Q 046226 89 LKKDGQILCIAV--GNGFI-YTGSDSNVIRIWKQP--EFTECGRLK--AKTSMVVAMEVSHD--RVYAAYGDGKIRVWRS 159 (434)
Q Consensus 89 ~~h~~~v~~~~~--~~~~l-~tg~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~ 159 (434)
.+|.+.|++++| ++++| ++|+.||.|+|||+. +++.+..+. .|...|.+++|+|+ .|++++.||.|++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 356778999999 78886 899999999999998 888877776 56789999999997 8999999999999998
Q ss_pred CCCCCce-eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCEEEEEecCCcEEEEEcCCCeeEEE-ccc
Q 046226 160 TWDNGVK-HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDTLYSASLDKTIKVWRIRDSKCIET-IQA 234 (434)
Q Consensus 160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~ 234 (434)
....... ... .+.+|...|.+++|+|+ +++|++|+.|+.|++||+.+++.+.. +.+
T Consensus 179 ~~~~~~~~~~~-------------------~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 179 NSIPEEKFTQE-------------------PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSCCCSSCCCC-------------------CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCcccccccce-------------------eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 7665432 100 11259999999999999 99999999999999999999988877 668
Q ss_pred CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEec-------------------------ccccCeEE
Q 046226 235 HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT-------------------------AKYSPVKT 288 (434)
Q Consensus 235 ~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------------------------~~~~~v~~ 288 (434)
|...|.+++|+ ++ +|++++.|+.|++||+... .....+. .....+..
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG------KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTC------CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC------cEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 99999999999 88 9999999999999998721 1122221 23357899
Q ss_pred EEEecCCCEEEEEc-CCCeEEEEEc-CcccccccccCcccCcccceEEEEeeCC-EEEEe-cC------CCcEEEEeccC
Q 046226 289 LTLTLDDGLLYGGC-TDGYIHYWHK-GWFSAQLQYGGALQGHTHAVMCLASVAN-YVISG-SA------DSTSRVWAREQ 358 (434)
Q Consensus 289 ~~~~~~~~~l~~~~-~dg~i~i~d~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~-~~------dg~i~iwd~~~ 358 (434)
++|+|++++|++++ .|+.|++||+ +...........+..| ..|.+++|+++ ++++. +. +..|.+|.+..
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 99999999999998 8999999998 2222223334455566 78999999866 44443 32 45689998765
Q ss_pred C
Q 046226 359 D 359 (434)
Q Consensus 359 ~ 359 (434)
.
T Consensus 392 ~ 392 (450)
T 2vdu_B 392 N 392 (450)
T ss_dssp T
T ss_pred C
Confidence 3
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.1e-29 Score=228.34 Aligned_cols=249 Identities=12% Similarity=0.112 Sum_probs=176.4
Q ss_pred EecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc
Q 046226 116 IWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH 193 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
||++.+.+.+.....|...|.+++|+|+ .|++|+.+ .+++||+......... +
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~------------------------~ 57 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQ------------------------E 57 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEE------------------------E
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeee------------------------e
Confidence 5677777777778899999999999998 56665555 5899997644322211 2
Q ss_pred CCCeEEEEEecCCCEE-EEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcce
Q 046226 194 MGPITSIAINVSDDTL-YSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQL 272 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 272 (434)
...+..+++.++++.+ ++++.|+.|++||+.+++++..+. +...|.++.++++..+++ .|+.|++||+.... ...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~-~~~ 133 (355)
T 3vu4_A 58 MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPW-KRI 133 (355)
T ss_dssp CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTC-CBS
T ss_pred cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCc-eee
Confidence 2347788888888877 567788999999999999998887 667999999998764333 47899999987320 111
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEE--EcCCCeEEEEEcCccccc-----------ccc-cCcccCcccceEEEEee
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYG--GCTDGYIHYWHKGWFSAQ-----------LQY-GGALQGHTHAVMCLASV 338 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~-----------~~~-~~~~~~~~~~v~~~~~~ 338 (434)
.. +.. +...+++++ .++++ |+.||.|++||++..... ... ...+.+|...|.+++|+
T Consensus 134 ~~----~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 134 TD----DIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp SC----CEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred EE----ecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 11 111 333455666 56665 688999999999754310 011 34567999999999996
Q ss_pred --CCEEEEecCCCc-EEEEeccCCCceeeEEEee-c-cccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 339 --ANYVISGSADST-SRVWAREQDGRHTMLAVLV-G-HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 339 --~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
+++|++|+.|++ |++||++++ +++..+. + |...|.+++|+|+ +.+|++++.||+|++||+..+
T Consensus 205 ~~g~~l~s~s~d~~~v~iwd~~~~---~~~~~~~~g~h~~~v~~~~~s~~---------~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 205 RKSDMVATCSQDGTIIRVFKTEDG---VLVREFRRGLDRADVVDMKWSTD---------GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTSSEEEEEETTCSEEEEEETTTC---CEEEEEECTTCCSCEEEEEECTT---------SCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEeCCCCEEEEEECCCC---cEEEEEEcCCCCCcEEEEEECCC---------CCEEEEEECCCEEEEEEccCC
Confidence 679999999998 999999987 7778887 5 9999999999999 899999999999999999876
Q ss_pred C
Q 046226 414 K 414 (434)
Q Consensus 414 ~ 414 (434)
.
T Consensus 273 ~ 273 (355)
T 3vu4_A 273 Q 273 (355)
T ss_dssp S
T ss_pred C
Confidence 4
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=8.7e-28 Score=220.98 Aligned_cols=294 Identities=15% Similarity=0.094 Sum_probs=216.9
Q ss_pred ceeeeEEEeeccccEEEEEE--cCCEE-EEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeE
Q 046226 81 SYRCISSVLKKDGQILCIAV--GNGFI-YTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKI 154 (434)
Q Consensus 81 ~~~~~~~~~~h~~~v~~~~~--~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i 154 (434)
..+++..+..|. .+.+++| ++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+|+ .+++++ .++.|
T Consensus 21 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 21 SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTL 98 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEE
Confidence 345666676665 4899999 77766 677799999999999999988887665 8999999997 565544 57999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEE-EEEecCCcEEEEEcCCCeeEEEcc
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTL-YSASLDKTIKVWRIRDSKCIETIQ 233 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~ 233 (434)
++||+.+++....+ .+...+.+++|+|++++| ++++.|+.|++||+.+++.+..+.
T Consensus 99 ~v~d~~~~~~~~~~-----------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 99 SVIDTTSNTVAGTV-----------------------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp EEEETTTTEEEEEE-----------------------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCeEEEEE-----------------------eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 99999876554443 245578999999999987 678889999999999999888887
Q ss_pred cCccCeEEEEEcCCC-eE-EEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc---CCCeEE
Q 046226 234 AHSEPINALVVADDG-VL-YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC---TDGYIH 308 (434)
Q Consensus 234 ~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~ 308 (434)
.+ ..+.+++|+|++ .+ ++++.++.|++||++. ......+. +...+.+++|+|++++|++++ .++.|+
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 65 456999999999 55 6778899999999872 12222222 445789999999999999888 689999
Q ss_pred EEEcCcccccccccCcccCcccceEEEEee--CCEE-EEecCCCcEEEEeccCCCceeeEEEeecccccee---EEEEee
Q 046226 309 YWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYV-ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIR---CAIAFL 382 (434)
Q Consensus 309 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~---~~~~~~ 382 (434)
+||+....... .+..|. .+.+++++ +++| ++++.|+.|++||+.++ +.+..+..|..+.. .+.+.|
T Consensus 228 ~~d~~~~~~~~----~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 299 (391)
T 1l0q_A 228 MIDTGTNKITA----RIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN---TITATMAVGKNPYASGQFIGSIP 299 (391)
T ss_dssp EEETTTTEEEE----EEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECSSSEECCSSCEEECS
T ss_pred EEECCCCeEEE----EEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC---cEEEEEECCcCCCccceeeeccc
Confidence 99987543322 233343 46777776 6666 67789999999999987 67777776665432 133332
Q ss_pred cccC-----------CCCCCcc--cEEEEeecCCeEEEEecCCCCc
Q 046226 383 GRFG-----------EETEDEY--CTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 383 ~~~~-----------~~~~~~~--~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
+... ..+.+.. ..+...+.|..+++|++.++..
T Consensus 300 ~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 300 VQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp SCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred ccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 1100 0000001 4577788899999999987764
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-29 Score=226.93 Aligned_cols=227 Identities=8% Similarity=-0.024 Sum_probs=173.0
Q ss_pred CEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEE
Q 046226 143 DRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWR 222 (434)
Q Consensus 143 ~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd 222 (434)
..+++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~------------------------~~~v~~~~~~~~---~~s~s~D~~i~~w~ 101 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT------------------------TPNPRTGGEHPA---IISRGPCNRLLLLY 101 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE------------------------EECCCTTCCCCS---EEEECSTTEEEEEE
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe------------------------cCCceeeeeCCc---eEEecCCCeEEEEE
Confidence 379999999999999998877665552 344667778777 99999999999997
Q ss_pred cC---------CCeeEEEcc-cCccCeEEEEEcC--CC-eEEEEeCCCeEEEEecccccCcceeEEEEEe-cccccCeEE
Q 046226 223 IR---------DSKCIETIQ-AHSEPINALVVAD--DG-VLYSASDDATVRVWRRYFYSENQLHTLILTL-TAKYSPVKT 288 (434)
Q Consensus 223 ~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~ 288 (434)
.. +++.+..+. .|...|.+++++| ++ ++++++.||.|++||++. ....... ..+...+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~------~~~~~~~~~~~~~~i~~ 175 (343)
T 3lrv_A 102 PGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED------DSQYIVHSAKSDVEYSS 175 (343)
T ss_dssp TTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS------SCEEEEECCCSSCCCCE
T ss_pred ccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC------CcEEEEEecCCCCceEE
Confidence 65 445444444 5678899999999 88 999999999999999871 1122222 345567999
Q ss_pred EEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccC-cccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeE
Q 046226 289 LTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQG-HTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTML 365 (434)
Q Consensus 289 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~ 365 (434)
++|+|++.+|++|+.||.|++||++...... ..+.. |...|.+++|+ +.+|++++ |+.|++||+++......+
T Consensus 176 ~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 176 GVLHKDSLLLALYSPDGILDVYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp EEECTTSCEEEEECTTSCEEEEESSCTTSCC---EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCCCCc---cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 9999999999999999999999997654331 23445 89999999996 56999999 559999999987443333
Q ss_pred EEeecccccee--EEEEeecccCCCCCCcccEEEEeec-CCeEEEEecCCCCc
Q 046226 366 AVLVGHRGPIR--CAIAFLGRFGEETEDEYCTICTGSL-DGVLKMWRVTRPKS 415 (434)
Q Consensus 366 ~~~~~h~~~v~--~~~~~~~~~~~~~~~~~~~l~s~~~-Dg~v~iw~~~~~~~ 415 (434)
..+..|...+. +++|+|+ +++|++++. |+.|++|++.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~---------g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDDS---------GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp CCCBC-----CCEEEEECTT---------SSEEEEEETTTTEEEEEEECTTTC
T ss_pred cccccccccccceEEEECCC---------CCEEEEecCCCCcEEEEEEccccc
Confidence 33334555554 5999998 999999998 99999999976654
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=7.9e-29 Score=227.73 Aligned_cols=234 Identities=11% Similarity=0.061 Sum_probs=162.9
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeE-----eeccCCCccEEEEEEeC--------C--EEEEEEcCCe
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTEC-----GRLKAKTSMVVAMEVSH--------D--RVYAAYGDGK 153 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~-----~~~~~~~~~v~~l~~~~--------~--~l~~~s~dg~ 153 (434)
|.+.+....+ ++.+|++|+.|++|+|||..+++.. ..+.+|.+.|++++|+| + .|++++.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 3333433344 6778999999999999999887543 45789999999999986 3 7999999999
Q ss_pred EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCC-EEEEEecCCcEEEEEcCCCeeEEEc
Q 046226 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDD-TLYSASLDKTIKVWRIRDSKCIETI 232 (434)
Q Consensus 154 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~ 232 (434)
|+|||+..+....... +|..+|.+++|+|++. +|++|+.||+|++||+++++.....
T Consensus 168 v~~Wd~~~~~~~~~~~----------------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGY----------------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EEEEEEETTEEEEEEE----------------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred EEEEECCCCceeeeec----------------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence 9999997654433332 5889999999999874 7999999999999999887543322
Q ss_pred -------------------------ccCccCeEEEEEc-CCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccC
Q 046226 233 -------------------------QAHSEPINALVVA-DDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSP 285 (434)
Q Consensus 233 -------------------------~~~~~~v~~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 285 (434)
.+|...+.++.|. +++ .+++++.|+.+++||+..... ...+..+...
T Consensus 226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~------~~~l~~~~~~ 299 (393)
T 4gq1_A 226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND------YNEISDSTMK 299 (393)
T ss_dssp -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------
T ss_pred cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC------CceEeeecCc
Confidence 3567788899987 677 999999999999999873221 1111111111
Q ss_pred ------------------eEEEEEec--CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEE
Q 046226 286 ------------------VKTLTLTL--DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVI 343 (434)
Q Consensus 286 ------------------v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 343 (434)
.....+++ ++.++++|+.||.|++||+....... ...+|..+|.+++|+ |++||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~----~~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS----IPIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE----EEEECSSCEEEEEECTTSSEEE
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE----EecCCCCcEEEEEEcCCCCEEE
Confidence 12223333 34467788899999999987544332 344677899999986 77999
Q ss_pred EecCCCcEEEEecc
Q 046226 344 SGSADSTSRVWARE 357 (434)
Q Consensus 344 s~~~dg~i~iwd~~ 357 (434)
+++.|| +.+|.+.
T Consensus 376 ~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 376 IATEGS-VLLTRLM 388 (393)
T ss_dssp EEESSE-EEEEEEG
T ss_pred EEeCCC-eEEEEEe
Confidence 998766 6666554
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.1e-27 Score=204.87 Aligned_cols=177 Identities=11% Similarity=0.062 Sum_probs=137.3
Q ss_pred CCCeEEEecC-CCceeEeeccCCCccEEEEEEeC-----CEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEE
Q 046226 110 DSNVIRIWKQ-PEFTECGRLKAKTSMVVAMEVSH-----DRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNL 183 (434)
Q Consensus 110 ~dg~i~iwd~-~~~~~~~~~~~~~~~v~~l~~~~-----~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (434)
.|+.|++|++ ++++.+..+..|...+..++|++ +.|++++.|++|+|||+.+++.+..+....
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~----------- 223 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD----------- 223 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----------
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC-----------
Confidence 4899999999 55888888888888888888887 389999999999999999888777663100
Q ss_pred EeccccccCcCCCeEEEEEecCCCEE------------EEEecCCcEEEEEcCCCeeEEEc-----ccCccCeEEEEEcC
Q 046226 184 IVGKDKMMKHMGPITSIAINVSDDTL------------YSASLDKTIKVWRIRDSKCIETI-----QAHSEPINALVVAD 246 (434)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~~~~l------------~s~~~dg~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~ 246 (434)
.+...+.+++|+|++.++ ++|+.|++|++||..+++.+..+ .+|...+.+..++
T Consensus 224 --------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s- 294 (356)
T 2w18_A 224 --------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK- 294 (356)
T ss_dssp -----------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-
T ss_pred --------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC-
Confidence 123478888999999876 56888999999999999987765 3566665555554
Q ss_pred CCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeE-EEEEecCCCEEEEEcCCCeEEEEEc
Q 046226 247 DGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVK-TLTLTLDDGLLYGGCTDGYIHYWHK 312 (434)
Q Consensus 247 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i~d~ 312 (434)
...+++++.|++|+|||+. ..+....+.+|...+. .++|+|+|++|++|+.|++|+|||+
T Consensus 295 g~~lASgS~DgTIkIWDl~------tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLL------LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTEEEEEETTSCEEEEETT------TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCcEEEEECC------CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 2289999999999999997 4455667777877655 6899999999999999999999985
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.1e-26 Score=213.58 Aligned_cols=266 Identities=12% Similarity=0.034 Sum_probs=200.3
Q ss_pred EeCCC--eEEEecCCCc--eeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCcee
Q 046226 108 GSDSN--VIRIWKQPEF--TECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVR 181 (434)
Q Consensus 108 g~~dg--~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
++.++ .|.+||..++ +.+..+..+. .+.+++|+|+ .+++++.|+.|++||+.+++.......
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----------- 162 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP----------- 162 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC-----------
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc-----------
Confidence 44455 4555555434 5566666554 4568999986 455556688999999987665432211
Q ss_pred EEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eE-EEEeCCCeE
Q 046226 182 NLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL-YSASDDATV 259 (434)
Q Consensus 182 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i 259 (434)
..+.+|...|.+++|++++.++++++.|+.|++||+++++.+..+..|...+.+++|+|++ .+ ++++.|+.|
T Consensus 163 ------~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 236 (433)
T 3bws_A 163 ------EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDI 236 (433)
T ss_dssp ------HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred ------ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcE
Confidence 0123688899999999999999999999999999999999999998899999999999998 55 566689999
Q ss_pred EEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc--------CCCeEEEEEcCcccccccccCcccCcccc
Q 046226 260 RVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC--------TDGYIHYWHKGWFSAQLQYGGALQGHTHA 331 (434)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 331 (434)
++||++ .......+.. ...+.+++|+|+++++++++ .||.|++||++....... ..|...
T Consensus 237 ~~~d~~------~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~-----~~~~~~ 304 (433)
T 3bws_A 237 SVIDRK------TKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT-----IGPPGN 304 (433)
T ss_dssp EEEETT------TTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE-----EEEEEC
T ss_pred EEEECC------CCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee-----ccCCCC
Confidence 999987 1223333333 34589999999999999888 589999999875433222 144556
Q ss_pred eEEEEee--CC-EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec-------
Q 046226 332 VMCLASV--AN-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL------- 401 (434)
Q Consensus 332 v~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~------- 401 (434)
+.+++++ ++ ++++++.|+.|++||+.++ +.+..+. +...+.+++|+|+ +++|++++.
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---~~~~~~~-~~~~~~~~~~s~d---------g~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---KVQKSIP-VFDKPNTIALSPD---------GKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EEEEEECSSTTEEEEEETTTTEEEEEETTTT---EEEEEEE-CSSSEEEEEECTT---------SSEEEEEECCCCCTTT
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEECCCC---cEEEEec-CCCCCCeEEEcCC---------CCEEEEEecCCCcccc
Confidence 7778776 54 5577789999999999976 5555554 6778999999999 888887776
Q ss_pred --------CCeEEEEecCCCCcc
Q 046226 402 --------DGVLKMWRVTRPKSS 416 (434)
Q Consensus 402 --------Dg~v~iw~~~~~~~~ 416 (434)
||.|++||+.+++..
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEE
T ss_pred ccccccccceEEEEEECCCCcEE
Confidence 679999999887654
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=6.6e-26 Score=215.78 Aligned_cols=278 Identities=8% Similarity=0.013 Sum_probs=213.4
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeec--CCCCCceeeEeeeccCC
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRS--TWDNGVKHVKLATIPKT 176 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~--~~~~~~~~~~~~~~~~~ 176 (434)
++.++++++.|++|.+||..+++.+.++..+.. +..++|+|+ ++++++.|+.|.+||+ .+.+.+..+
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i-------- 218 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-------- 218 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE--------
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE--------
Confidence 778899999999999999999999999884433 889999998 8999999999999999 554433333
Q ss_pred CCceeEEEeccccccCcCCCeEEEEEec----CCCEEEEEec-CCcEEEEEcCCCeeEEEcccC-----------ccCeE
Q 046226 177 GGAVRNLIVGKDKMMKHMGPITSIAINV----SDDTLYSASL-DKTIKVWRIRDSKCIETIQAH-----------SEPIN 240 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~-----------~~~v~ 240 (434)
.+...+..++|+| +++++++++. +++|.+||..+++++..+..+ ...+.
T Consensus 219 ---------------~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 219 ---------------KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp ---------------ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred ---------------ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 2445679999999 9999999874 899999999999998887652 23788
Q ss_pred EEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccc
Q 046226 241 ALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSA 317 (434)
Q Consensus 241 ~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~ 317 (434)
.+.+++++ ++++...++.|.+||+..... .. ...+ .+...+..+.|+|++++|+++ ..+++|.+||+.+.+.
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~--l~--~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDN--LT--VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSS--CE--EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCc--ce--eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 99999977 778888999999999873221 11 1122 244568889999999987655 4589999999876544
Q ss_pred cccccCcccCcccceEEEE-ee-CCEEEEec-CCCcEEEEeccCCCc----eeeEEEeeccccceeEEEEeecccCCCCC
Q 046226 318 QLQYGGALQGHTHAVMCLA-SV-ANYVISGS-ADSTSRVWAREQDGR----HTMLAVLVGHRGPIRCAIAFLGRFGEETE 390 (434)
Q Consensus 318 ~~~~~~~~~~~~~~v~~~~-~~-~~~l~s~~-~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 390 (434)
...+......|......+. .+ +..++++. .|++|.+||+.+.+. +++++++.+|.+.+..++++|+
T Consensus 359 ~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd------- 431 (543)
T 1nir_A 359 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK------- 431 (543)
T ss_dssp EEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-------
T ss_pred EEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC-------
Confidence 3322211123544444442 33 44667765 689999999987321 4889999999999999999999
Q ss_pred CcccEEEEee-------cCCeEEEEecCCCCcc
Q 046226 391 DEYCTICTGS-------LDGVLKMWRVTRPKSS 416 (434)
Q Consensus 391 ~~~~~l~s~~-------~Dg~v~iw~~~~~~~~ 416 (434)
+++|++++ .+++|.+||+.+.+..
T Consensus 432 --g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 432 --SSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp --CCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred --CCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 89999987 3789999999988765
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=7.8e-26 Score=208.96 Aligned_cols=271 Identities=13% Similarity=0.023 Sum_probs=200.7
Q ss_pred cEEEEEE---cCCEEEEEe----CCC----eEEEecC--CCceeE--eeccCCCccEEEEEEe----------------C
Q 046226 94 QILCIAV---GNGFIYTGS----DSN----VIRIWKQ--PEFTEC--GRLKAKTSMVVAMEVS----------------H 142 (434)
Q Consensus 94 ~v~~~~~---~~~~l~tg~----~dg----~i~iwd~--~~~~~~--~~~~~~~~~v~~l~~~----------------~ 142 (434)
.+...+| ..+++++|+ .|| .|++||+ .+++.+ ..+.+|...+..+++. .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 3444555 345677776 467 9999999 888877 4578888877777665 3
Q ss_pred CEEEEEEcC------CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC
Q 046226 143 DRVYAAYGD------GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK 216 (434)
Q Consensus 143 ~~l~~~s~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 216 (434)
..++.++.+ +.|++||+.... ...+. +|...+.+++|+|++++|++++.++
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~----------------------~~~~~v~~~~~Spdg~~la~~s~~~ 200 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVH----------------------RSPQPLMSPAWSPDGSKLAYVTFES 200 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCS-CEEEE----------------------EESSCEEEEEECTTSSEEEEEECTT
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCC-CEEEe----------------------CCCCcceeeEEcCCCCEEEEEEecC
Confidence 466666654 799999987432 22221 4888999999999999999999875
Q ss_pred ---cEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEE-EEeCCCe--EEEEecccccCcceeEEEEEecccccCeEEE
Q 046226 217 ---TIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY-SASDDAT--VRVWRRYFYSENQLHTLILTLTAKYSPVKTL 289 (434)
Q Consensus 217 ---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 289 (434)
.|++||+.+++.. .+..|...+.+++|+|++ .|+ +++.++. |++||+.. .. ...+..+...+.++
T Consensus 201 ~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~------~~-~~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 201 GRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS------GQ-IRQVTDGRSNNTEP 272 (415)
T ss_dssp SSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT------CC-EEECCCCSSCEEEE
T ss_pred CCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC------CC-EEeCcCCCCcccce
Confidence 9999999998875 466688899999999999 566 6666654 89999862 11 23456677889999
Q ss_pred EEecCCCEEEEEcC-CC--eEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCC---CcEEEEeccCCCc
Q 046226 290 TLTLDDGLLYGGCT-DG--YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSAD---STSRVWAREQDGR 361 (434)
Q Consensus 290 ~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d---g~i~iwd~~~~~~ 361 (434)
+|+|+|++|++++. ++ .|.+||+...... .+..+...+.+++|+ |++|++++.+ ..|++||+.++.
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-----~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~- 346 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-----RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG- 346 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSSCCE-----ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCCCEE-----EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC-
Confidence 99999999988876 45 6777787644321 223445567777775 6788877754 589999999862
Q ss_pred eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCC---eEEEEecCCCC
Q 046226 362 HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG---VLKMWRVTRPK 414 (434)
Q Consensus 362 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg---~v~iw~~~~~~ 414 (434)
. ..+..|. .+.+++|+|+ |++|++++.|+ .|++||+..+.
T Consensus 347 --~-~~l~~~~-~~~~~~~spd---------g~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 347 --V-QVLSSTF-LDETPSLAPN---------GTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp --E-EECCCSS-SCEEEEECTT---------SSEEEEEEEETTEEEEEEEETTSCC
T ss_pred --E-EEecCCC-CcCCeEEcCC---------CCEEEEEEcCCCccEEEEEECCCCc
Confidence 2 3455554 8899999999 89999988887 89999987443
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=7.1e-25 Score=202.54 Aligned_cols=256 Identities=10% Similarity=-0.062 Sum_probs=194.9
Q ss_pred EEEeeccccEEEEEEc----------------CCEEEEEeCC------CeEEEecCCCceeEeeccCCCccEEEEEEeCC
Q 046226 86 SSVLKKDGQILCIAVG----------------NGFIYTGSDS------NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD 143 (434)
Q Consensus 86 ~~~~~h~~~v~~~~~~----------------~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 143 (434)
..+.+|...+..+++. +..++.++.+ +.|++||+.. .....+..|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 4477888887777662 7777777664 7999999874 456677788999999999998
Q ss_pred --EEEEEEcCC---eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEE-EEecCCc
Q 046226 144 --RVYAAYGDG---KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKT 217 (434)
Q Consensus 144 --~l~~~s~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~ 217 (434)
.|++++.++ .|++||+.+++..... .|...+.+++|+|+|++|+ +++.++.
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~-----------------------~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVA-----------------------SFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEE-----------------------CCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEee-----------------------cCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 788888875 9999999876543211 4777899999999999888 6666654
Q ss_pred --EEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeC-CC--eEEEEecccccCcceeEEEEEecccccCeEEEEE
Q 046226 218 --IKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASD-DA--TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTL 291 (434)
Q Consensus 218 --i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 291 (434)
|++||+.+++. ..+..|...+.+++|+|++ .|++++. ++ .|.+||+.. .. ...+..+...+..++|
T Consensus 247 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~-----~~~l~~~~~~~~~~~~ 318 (415)
T 2hqs_A 247 LNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GA-----PQRITWEGSQNQDADV 318 (415)
T ss_dssp CEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SC-----CEECCCSSSEEEEEEE
T ss_pred ceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC--CC-----EEEEecCCCcccCeEE
Confidence 99999988875 5677788899999999999 6777665 45 577777661 11 1223345567889999
Q ss_pred ecCCCEEEEEcCC---CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCC---cEEEEeccCCCcee
Q 046226 292 TLDDGLLYGGCTD---GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADS---TSRVWAREQDGRHT 363 (434)
Q Consensus 292 ~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg---~i~iwd~~~~~~~~ 363 (434)
+|+|++|++++.+ ..|++||+...... .+..+. .+.+++|+ |++|++++.++ .|++||+.. .
T Consensus 319 spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-----~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g----~ 388 (415)
T 2hqs_A 319 SSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-----VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG----R 388 (415)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCCEE-----ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS----C
T ss_pred CCCCCEEEEEECcCCceEEEEEECCCCCEE-----EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC----C
Confidence 9999999988764 58999998754332 122333 67777775 67888888776 799999975 4
Q ss_pred eEEEeeccccceeEEEEeec
Q 046226 364 MLAVLVGHRGPIRCAIAFLG 383 (434)
Q Consensus 364 ~~~~~~~h~~~v~~~~~~~~ 383 (434)
....+.+|.+.|.+++|+|.
T Consensus 389 ~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 389 FKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp CEEECCCSSSEEEEEEECCC
T ss_pred cEEEeeCCCCCCcCCccccc
Confidence 56778899999999999997
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.9e-23 Score=196.67 Aligned_cols=323 Identities=9% Similarity=-0.012 Sum_probs=224.7
Q ss_pred CCCCCccCCCCCCCcc-----cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecC--CCceeEeeccCCCcc
Q 046226 64 PFNPTAAAGSSSPETS-----SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQ--PEFTECGRLKAKTSM 134 (434)
Q Consensus 64 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~--~~~~~~~~~~~~~~~ 134 (434)
.++...+++...+.++ .+.+++.++..+.. +.+++| +|++|++++.|+.|++||+ .+++.+.++.. ...
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~ 223 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIE 223 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCC
Confidence 3445555555555543 44566777774333 889989 8999999999999999999 88888888874 456
Q ss_pred EEEEEEeC----C--EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC-CCeEEEEEecCC
Q 046226 135 VVAMEVSH----D--RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM-GPITSIAINVSD 206 (434)
Q Consensus 135 v~~l~~~~----~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~ 206 (434)
+..++|+| + ++++++ .+++|.+||..+.+.+..+.......... .-|. ..+..+.++|++
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~------------~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQ------------TYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSC------------CEESCCCEEEEEECSSS
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcc------------ccccCCceEEEEECCCC
Confidence 79999999 7 777777 48999999998777666554211000000 0033 378999999977
Q ss_pred CE-EEEEecCCcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEE-EEeCCCeEEEEecccccCcceeEEEEEecc
Q 046226 207 DT-LYSASLDKTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLY-SASDDATVRVWRRYFYSENQLHTLILTLTA 281 (434)
Q Consensus 207 ~~-l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 281 (434)
.. +++...++.|.+||+.+.+.+. .+. +...+.++.|+|++ +++ ++..++.|.+||+.. .+....+..
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t------g~l~~~i~~ 364 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD------RRLSALVDV 364 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT------TEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC------CeEEEeecc
Confidence 65 4566778999999998866443 333 56678899999999 555 455689999999871 222333322
Q ss_pred ----cccCeEEEEEecC-CCEEEEEc-CCCeEEEEEcCcccc---cccccCcccCcccceEEEEee--CCEEEEec----
Q 046226 282 ----KYSPVKTLTLTLD-DGLLYGGC-TDGYIHYWHKGWFSA---QLQYGGALQGHTHAVMCLASV--ANYVISGS---- 346 (434)
Q Consensus 282 ----~~~~v~~~~~~~~-~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~---- 346 (434)
|......+ ++|+ +..++++. .|++|.+||+..... ..+....+.+|...+..+.++ +++|++++
T Consensus 365 g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 365 GKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred CCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 43333333 4776 55666665 589999999875221 244455666776666666664 67999887
Q ss_pred ---CCCcEEEEeccCCCce-eeEE-----EeeccccceeEEEEeecccCCCCCCcccEEEEe-----ecCCeEEEEecCC
Q 046226 347 ---ADSTSRVWAREQDGRH-TMLA-----VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG-----SLDGVLKMWRVTR 412 (434)
Q Consensus 347 ---~dg~i~iwd~~~~~~~-~~~~-----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~-----~~Dg~v~iw~~~~ 412 (434)
.+++|.+||+.+.... +.+. .+..+...+..+.|+|+ |+.|+.+ +.|+.|.|||..+
T Consensus 444 ~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR---------GDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS---------SSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC---------CCEEEEEeecCCCCCCeEEEEECCC
Confidence 2779999999987532 1110 02456788999999999 7777755 2489999999999
Q ss_pred CCccc
Q 046226 413 PKSSC 417 (434)
Q Consensus 413 ~~~~~ 417 (434)
++...
T Consensus 515 ~~~~~ 519 (543)
T 1nir_A 515 LKLKA 519 (543)
T ss_dssp TEEEE
T ss_pred ceEEE
Confidence 87654
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.2e-22 Score=182.15 Aligned_cols=276 Identities=10% Similarity=0.044 Sum_probs=189.8
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCCC-ceeeEeeeccCC
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDNG-VKHVKLATIPKT 176 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~~-~~~~~~~~~~~~ 176 (434)
.+..+++++.++.|++||..+++....+..+...+ .++|+|+ .+++++. ++.|.+||+.+++. .....
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------- 80 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ------- 80 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-------
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-------
Confidence 34557888889999999999999888887776777 9999997 5666666 89999999987655 33321
Q ss_pred CCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC---cEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEE-
Q 046226 177 GGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK---TIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY- 251 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~- 251 (434)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+..+ ....+++|+|++ +++
T Consensus 81 ---------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 81 ---------------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLIL 144 (331)
T ss_dssp ---------------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEE
T ss_pred ---------------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEE
Confidence 2445555599999999999665553 8999999999988877643 456899999999 444
Q ss_pred EEeCCCe-EEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEE-EcCCCeEEEEEcCcccccccccCcccCcc
Q 046226 252 SASDDAT-VRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYG-GCTDGYIHYWHKGWFSAQLQYGGALQGHT 329 (434)
Q Consensus 252 s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 329 (434)
+...++. |.+|++... ................+..++|+|+|+++++ +..++.|.+||+....... ....+..+
T Consensus 145 ~~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~-~~~~~~~~- 220 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDAD--GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT-LLNAVGTN- 220 (331)
T ss_dssp EEETTTTEEEEEEECTT--CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE-EEEEEECS-
T ss_pred EecCCCceEEEEEECCC--CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc-eeeeccCC-
Confidence 4456678 999998721 1111111122233456899999999996655 4568999999987544300 01122222
Q ss_pred cceEEEEe--eCCEEEE-ecCCCcEEEEeccCCCceeeEEEeecc----ccc---eeEEEEeecccCCCCCCcccEEEE-
Q 046226 330 HAVMCLAS--VANYVIS-GSADSTSRVWAREQDGRHTMLAVLVGH----RGP---IRCAIAFLGRFGEETEDEYCTICT- 398 (434)
Q Consensus 330 ~~v~~~~~--~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~h----~~~---v~~~~~~~~~~~~~~~~~~~~l~s- 398 (434)
..+..+++ +|+++++ ...++.|.+||+.++.. ..+..+..+ ..+ ...++|+|+ +++|++
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~spd---------g~~l~v~ 290 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL-SFVKSFGHGLLIDPRPLFGANQMALNKT---------ETKLFIS 290 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE-EEEEEEECCCCCCCGGGTTCCCEEECTT---------SSEEEEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce-eeecccccccccCCCCcccccceEECCC---------CCEEEEe
Confidence 34455555 4775554 45678999999988622 224443332 222 245899998 777655
Q ss_pred eecCCeEEEEecCCCC
Q 046226 399 GSLDGVLKMWRVTRPK 414 (434)
Q Consensus 399 ~~~Dg~v~iw~~~~~~ 414 (434)
+..++.|.+||+....
T Consensus 291 ~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 291 ANISRELKVFTISGKV 306 (331)
T ss_dssp ETTTTEEEEEETTSCE
T ss_pred cCCCCcEEEEEecCCc
Confidence 4556799999998654
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=4.1e-23 Score=186.03 Aligned_cols=273 Identities=10% Similarity=0.089 Sum_probs=183.7
Q ss_pred EEEEEeCCCeEEEecCC-Cc--eeEeeccCCCccEEEEEEeCC--EEEEEEcC-CeEEEeecC--CCCCceeeEeeeccC
Q 046226 104 FIYTGSDSNVIRIWKQP-EF--TECGRLKAKTSMVVAMEVSHD--RVYAAYGD-GKIRVWRST--WDNGVKHVKLATIPK 175 (434)
Q Consensus 104 ~l~tg~~dg~i~iwd~~-~~--~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d-g~i~vwd~~--~~~~~~~~~~~~~~~ 175 (434)
++++++.|+.|++||+. ++ +.+..+ .+...+.+++|+|+ .+++++.+ +.|.+|++. .+.. .....
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-~~~~~----- 79 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-TFAAE----- 79 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-EEEEE-----
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-eeccc-----
Confidence 44555789999999985 33 333333 46677899999997 68888876 999999987 2221 11110
Q ss_pred CCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec-CCcEEEEEcC---CCeeEEEcccCccCeEEEEEcCCC-eE
Q 046226 176 TGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL-DKTIKVWRIR---DSKCIETIQAHSEPINALVVADDG-VL 250 (434)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~-~l 250 (434)
+ .....+..++|+|++++|++++. ++.|.+||+. ..+.+..+.. ...+.+++|+|++ .+
T Consensus 80 -------~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 143 (343)
T 1ri6_A 80 -------S--------ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTL 143 (343)
T ss_dssp -------E--------ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEE
T ss_pred -------c--------ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEE
Confidence 0 12237889999999998877665 7889999994 4445555543 3458899999999 66
Q ss_pred EEEe-CCCeEEEEecccccCcceeEEE--EEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccc---cC
Q 046226 251 YSAS-DDATVRVWRRYFYSENQLHTLI--LTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQY---GG 323 (434)
Q Consensus 251 ~s~~-~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~---~~ 323 (434)
++++ .++.|.+||+.. ........ .........+..++|+|++++++++ ..++.|.+||+......... ..
T Consensus 144 ~~~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSD--DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp EEEEGGGTEEEEEEECT--TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred EEecCCCCEEEEEEecC--CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence 6666 899999999872 11111111 1122233578899999999977655 47899999998642222111 11
Q ss_pred ccc-Cc--ccceEEEEee--CCEEE-EecCCCcEEEEeccC-CCceeeEEEeeccccceeEEEEeecccCCCCCCcccEE
Q 046226 324 ALQ-GH--THAVMCLASV--ANYVI-SGSADSTSRVWAREQ-DGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTI 396 (434)
Q Consensus 324 ~~~-~~--~~~v~~~~~~--~~~l~-s~~~dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 396 (434)
.+. ++ ...+.+++|+ +++|+ ++..++.|++||+.. ++....+..+..+.. +.+++|+|+ +++|
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d---------g~~l 291 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS---------GKYL 291 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT---------SSEE
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC---------CCEE
Confidence 111 11 2345567775 55665 566899999999984 223355656665555 889999998 7877
Q ss_pred EEee-cCCeEEEEecC
Q 046226 397 CTGS-LDGVLKMWRVT 411 (434)
Q Consensus 397 ~s~~-~Dg~v~iw~~~ 411 (434)
++++ .|+.|.+|+++
T Consensus 292 ~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 292 IAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEECTTTCEEEEEEEE
T ss_pred EEecCCCCeEEEEEEc
Confidence 7776 68999999665
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=4.1e-23 Score=205.74 Aligned_cols=281 Identities=10% Similarity=-0.014 Sum_probs=199.9
Q ss_pred cccEEEEEE--cCCEEEEEeC-CC-----eEEEecCCCceeEeeccCCCc------------------------cEEEEE
Q 046226 92 DGQILCIAV--GNGFIYTGSD-SN-----VIRIWKQPEFTECGRLKAKTS------------------------MVVAME 139 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~-dg-----~i~iwd~~~~~~~~~~~~~~~------------------------~v~~l~ 139 (434)
...|.+++| +|++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456889999 8999999998 88 999999999887666654432 378999
Q ss_pred EeCC--EEEEEEcCCeEEEeecCCCC--CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC
Q 046226 140 VSHD--RVYAAYGDGKIRVWRSTWDN--GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD 215 (434)
Q Consensus 140 ~~~~--~l~~~s~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 215 (434)
|+|| .|++++. +.|++||+.++. ....+ ..|...+.+++|+|||++|+.++ +
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l----------------------~~~~~~~~~~~~SPDG~~la~~~-~ 171 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL----------------------THGEGFATDAKLSPKGGFVSFIR-G 171 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC----------------------CCSSSCEEEEEECTTSSEEEEEE-T
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc----------------------ccCCcccccccCCCCCCEEEEEe-C
Confidence 9998 6776665 999999998662 22222 14778899999999999999988 5
Q ss_pred CcEEEEEcCCCeeEEEcccCccC----------------eEEEEEcCCC-eEEEEeCCC---------------------
Q 046226 216 KTIKVWRIRDSKCIETIQAHSEP----------------INALVVADDG-VLYSASDDA--------------------- 257 (434)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~-~l~s~~~dg--------------------- 257 (434)
+.|++||+.+++.......+... +.++.|+||| .|++++.|+
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 68999999988876655444332 4789999999 788877665
Q ss_pred ------------eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC-----CCeEEEEEcCccccccc
Q 046226 258 ------------TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT-----DGYIHYWHKGWFSAQLQ 320 (434)
Q Consensus 258 ------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~ 320 (434)
.|.+||+... .... .......+...+..++| |||++|++++. +..|++||+.+......
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~--~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQ--AQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTT--CCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE
T ss_pred ecCCCCCCCCeeEEEEEECCCC--CceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE
Confidence 7888887620 1111 11111146678899999 99999987653 57899999875543322
Q ss_pred ccCcccCcccceEEEEe--eCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEE-EEeecccCCCCCCcccEE-
Q 046226 321 YGGALQGHTHAVMCLAS--VANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA-IAFLGRFGEETEDEYCTI- 396 (434)
Q Consensus 321 ~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~l- 396 (434)
...........+..++| +|+++++++.||.++||.+...+ . ...+..|...|..+ .|+|+ ++.|
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~--~-~~~l~~~~~~v~~~~~~s~d---------g~~l~ 395 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG--K-AAALTHGNWSVDELLAVDEK---------AGLAY 395 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS--C-EEESCCSSSCEEEEEEEETT---------TTEEE
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC--C-eeeeeecceEEEeEeEEeCC---------CCEEE
Confidence 11111011002234444 57788999999988898876432 3 56777888888887 59998 7655
Q ss_pred EEeecCC--eEEEEecCC
Q 046226 397 CTGSLDG--VLKMWRVTR 412 (434)
Q Consensus 397 ~s~~~Dg--~v~iw~~~~ 412 (434)
++++.|+ .++||++..
T Consensus 396 ~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEECSSCTTCBEEEEEET
T ss_pred EEEeCCCCceEEEEEEEc
Confidence 4556666 899999874
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=5.4e-23 Score=184.77 Aligned_cols=269 Identities=10% Similarity=0.022 Sum_probs=192.2
Q ss_pred CEEEEEeCCCeEEEecCCCceeEeeccCCCc--cEEEEEEeCC--EEEE-EEcCCeEEEeecCCCCCceeeEeeeccCCC
Q 046226 103 GFIYTGSDSNVIRIWKQPEFTECGRLKAKTS--MVVAMEVSHD--RVYA-AYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177 (434)
Q Consensus 103 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~~~--~l~~-~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 177 (434)
++|++++.++.|++||..+++.+..+..... .+..++|+|+ .+++ +..++.|.+||+.+++....+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP---- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT----
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc----
Confidence 5789999999999999999998887764332 4788999997 4544 44578999999987765544432100
Q ss_pred CceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe------------cCCcEEEEEcCCCeeEEEcccCccCeEEEEEc
Q 046226 178 GAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS------------LDKTIKVWRIRDSKCIETIQAHSEPINALVVA 245 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 245 (434)
..|...+.+++|+|++++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+
T Consensus 78 -------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 78 -------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp -------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC
T ss_pred -------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC
Confidence 00223577899999999999886 579999999999988877764 4567889999
Q ss_pred CCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC-------------------
Q 046226 246 DDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG------------------- 305 (434)
Q Consensus 246 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------- 305 (434)
|++ +++++ ++.|.+||+.. ......+..+.. ...+.|+|++..++..+.++
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~------~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEA------GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTT------TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred CCCCEEEEe--CCeEEEEECCC------CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 999 67766 68899999871 122222322220 11237889888776554432
Q ss_pred -----eEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEE
Q 046226 306 -----YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378 (434)
Q Consensus 306 -----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 378 (434)
.|.+||+...... . ..+..+...+.+++++ +++++++ ++.|++||+.++ +.+..+.. ...+.++
T Consensus 215 ~~~~~~v~~~d~~~~~~~-~--~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~---~~~~~~~~-~~~~~~~ 285 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMA-M--REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN---ASIKRVPL-PHSYYSV 285 (337)
T ss_dssp GGEEEEEEEEETTTCCEE-E--EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT---EEEEEEEC-SSCCCEE
T ss_pred cccccceEEEeCCCCCce-E--eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC---cCcceecC-CCceeeE
Confidence 4688998754432 1 1223444556667775 6688777 799999999887 55555543 3457889
Q ss_pred EEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 379 IAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
+|+|+ +++|++++.|+.|++||+.+++..
T Consensus 286 ~~s~d---------g~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 286 NVSTD---------GSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EECTT---------SCEEEEESBSSEEEEEETTTCCEE
T ss_pred EECCC---------CCEEEEEcCCCcEEEEECcCCcEE
Confidence 99998 888888899999999999988754
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=3.3e-23 Score=182.41 Aligned_cols=254 Identities=11% Similarity=-0.019 Sum_probs=183.3
Q ss_pred EEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCC-CCCceeeEeeeccCCCCceeEE
Q 046226 107 TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTW-DNGVKHVKLATIPKTGGAVRNL 183 (434)
Q Consensus 107 tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 183 (434)
.++.|+.|++||+.+++... +..|...|.+++|+|+ .+++++ ++.|++||+.. ++......
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~-------------- 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT-------------- 80 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC--------------
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc--------------
Confidence 34678999999999887664 4557889999999998 566654 88999999987 54332221
Q ss_pred EeccccccCcCCCeEEEEEecCCCEEEEEe--cCCcEEEE--EcCCCeeEEEcccCccCeEEEEEcCCC-eEE-EEeCCC
Q 046226 184 IVGKDKMMKHMGPITSIAINVSDDTLYSAS--LDKTIKVW--RIRDSKCIETIQAHSEPINALVVADDG-VLY-SASDDA 257 (434)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~vw--d~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~dg 257 (434)
..+...+.+++|+|++++|++++ .++.+.+| ++.+++ ...+..+ ..+..++|+|++ .|+ ++..++
T Consensus 81 -------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 81 -------GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp -------TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETT
T ss_pred -------ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCC
Confidence 01346788999999999999998 33445555 445544 3444433 348899999999 555 788899
Q ss_pred eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCcccccccccCcccCcccceEEEE
Q 046226 258 TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLA 336 (434)
Q Consensus 258 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 336 (434)
.+++|+++.... ....+..+...+.+++|+|++++|+.++ .++.+.+|++....... ..+..|...+.++.
T Consensus 152 ~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~ 223 (297)
T 2ojh_A 152 VFDIYSMDIDSG-----VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV---ERITDSAYGDWFPH 223 (297)
T ss_dssp EEEEEEEETTTC-----CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE---EECCCCSEEEEEEE
T ss_pred ceEEEEEECCCC-----cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc---EEEecCCcccCCeE
Confidence 999999762211 1234556677899999999999887766 58999999885322222 23445666777787
Q ss_pred ee--CCEEEEecCC-----------CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCC
Q 046226 337 SV--ANYVISGSAD-----------STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG 403 (434)
Q Consensus 337 ~~--~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg 403 (434)
|+ +++|++++.+ +.|++||+.++. ...+..+.+|...+.+++|+|+ +++|++++.|.
T Consensus 224 ~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spd---------g~~l~~~~~~~ 293 (297)
T 2ojh_A 224 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPD---------GDEFAYVRYFP 293 (297)
T ss_dssp ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTT---------SSEEEEEEECC
T ss_pred ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-ceeeeccCCCCcccccceECCC---------CCEEEEEEecc
Confidence 75 6688877765 569999998763 2445566688889999999999 88888887664
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=2.3e-21 Score=175.06 Aligned_cols=277 Identities=15% Similarity=0.112 Sum_probs=181.5
Q ss_pred EEEEEe----CCCeEEEecC--CCceeEe-eccCCCccEEEEEEeCC-EEEEEEc---CCeEEEeecCCCCCceeeEeee
Q 046226 104 FIYTGS----DSNVIRIWKQ--PEFTECG-RLKAKTSMVVAMEVSHD-RVYAAYG---DGKIRVWRSTWDNGVKHVKLAT 172 (434)
Q Consensus 104 ~l~tg~----~dg~i~iwd~--~~~~~~~-~~~~~~~~v~~l~~~~~-~l~~~s~---dg~i~vwd~~~~~~~~~~~~~~ 172 (434)
.+++|+ .++.|.+|++ .+++... ....+......++|+|+ .+++++. ++.|.+||+..+.. ..+..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~-~~~~~-- 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA-HKLNT-- 80 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE-EEEEE--
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE-EEeee--
Confidence 355553 3456777755 4555433 22334566788999998 5666655 68999999854432 11110
Q ss_pred ccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-cCCcEEEEEcCC-C--eeEEEccc---------CccCe
Q 046226 173 IPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-LDKTIKVWRIRD-S--KCIETIQA---------HSEPI 239 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~-~--~~~~~~~~---------~~~~v 239 (434)
...+...+..++|+|++++|++++ .++.|.+||+.. + +.+..+.. +...+
T Consensus 81 -----------------~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 81 -----------------VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp -----------------EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCE
T ss_pred -----------------eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCc
Confidence 013667788999999999998887 678999999962 2 33333322 12248
Q ss_pred EEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEE-EcCCCeEEEEEcCcccc
Q 046226 240 NALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYG-GCTDGYIHYWHKGWFSA 317 (434)
Q Consensus 240 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~ 317 (434)
.+++|+|++ ++++...++.|.+||+.. .................+..++|+|+|+++++ +..++.|.+|++.....
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~--~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVSD--AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECT--TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEECC--CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 899999999 666777789999999871 11111111111222346788999999996665 56789999999864222
Q ss_pred cccccCcccCc------ccceEEEEee--CCEE-EEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCC
Q 046226 318 QLQYGGALQGH------THAVMCLASV--ANYV-ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 318 ~~~~~~~~~~~------~~~v~~~~~~--~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 388 (434)
.......+... ...+..++++ |++| ++...++.|.+|++...+....+..+..+...+..++|+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd----- 296 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT----- 296 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT-----
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC-----
Confidence 21111111111 1346666665 6666 55667899999999754445667777777777899999999
Q ss_pred CCCcccEEEEeec-CCeEEEEecC
Q 046226 389 TEDEYCTICTGSL-DGVLKMWRVT 411 (434)
Q Consensus 389 ~~~~~~~l~s~~~-Dg~v~iw~~~ 411 (434)
+++|++++. ++.|.+|+++
T Consensus 297 ----g~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 297 ----EAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp ----SSEEEEEETTTTEEEEEEEC
T ss_pred ----CCEEEEEEcCCCcEEEEEEe
Confidence 888877775 4899999654
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=6.6e-21 Score=172.36 Aligned_cols=280 Identities=8% Similarity=-0.003 Sum_probs=195.5
Q ss_pred ccccEEEEEE--cCCEEEEEeC-------CCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEee
Q 046226 91 KDGQILCIAV--GNGFIYTGSD-------SNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWR 158 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd 158 (434)
....+..+++ ++++|++++. ++.|.+||..+++.+..+... ..+..++|+++ .++++. .++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4556888998 7788888774 568999999999888877643 34778899996 455554 479999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe--cCCcEEEEEcCCCeeEEEcccCc
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS--LDKTIKVWRIRDSKCIETIQAHS 236 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~ 236 (434)
..+++....+........ .......+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 184 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRT-------------EEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG 184 (353)
T ss_dssp TTTCCEEEEEESCCCCCC-------------SSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC
T ss_pred CCCCeeEEEEecCCCccc-------------cccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC
Confidence 987766555532110000 000112368899999999888776 47889999999999988887666
Q ss_pred cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC-CCeEEEEEcCc
Q 046226 237 EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT-DGYIHYWHKGW 314 (434)
Q Consensus 237 ~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 314 (434)
..+.+++|+|++ .+++++.++.|.+||+.. ............++...+..++|+|+++++++++. ++.|.+||+..
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTAD--NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTT--TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCC--CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 678899999999 888888999999999871 11111111111124456788999999998777665 59999999875
Q ss_pred ccccccccCcccCcccceEEEEeeCCEE-EEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcc
Q 046226 315 FSAQLQYGGALQGHTHAVMCLASVANYV-ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 315 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 393 (434)
........ .....-..+..+++++ ++...++.|.+||+.++ +.+..+... ..+.+++|+|+ +
T Consensus 263 ~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~-~~~~~~~~s~d---------g 325 (353)
T 3vgz_A 263 GNILAKVA----APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY---KVVKTFDTP-THPNSLALSAD---------G 325 (353)
T ss_dssp CCEEEEEE----CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT---EEEEEEECC-SEEEEEEECTT---------S
T ss_pred CcEEEEEE----cCCCceEEECCCCCEEEEEECCCCeEEEEECCCC---eEEEEEecC-CCCCeEEEcCC---------C
Confidence 54332221 1122223444567754 45557999999999887 556555543 46789999999 7
Q ss_pred cEEEEeecCC
Q 046226 394 CTICTGSLDG 403 (434)
Q Consensus 394 ~~l~s~~~Dg 403 (434)
++|+.+..++
T Consensus 326 ~~l~v~~~~~ 335 (353)
T 3vgz_A 326 KTLYVSVKQK 335 (353)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEccc
Confidence 7676666554
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=4.8e-22 Score=204.76 Aligned_cols=315 Identities=10% Similarity=0.036 Sum_probs=228.2
Q ss_pred CCcccccCCCCCCCCCCCCCccCCCCCC----C--ccccee----eeEEEeeccccE-------EEEEE--cCCEEEEEe
Q 046226 49 SPISLHTSPLSSPRHPFNPTAAAGSSSP----E--TSSSYR----CISSVLKKDGQI-------LCIAV--GNGFIYTGS 109 (434)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~----~~~~~~~h~~~v-------~~~~~--~~~~l~tg~ 109 (434)
..+..|...+..+.++++++.++..+.+ . .+..+. ....+..|.+.+ .+++| +|+++++++
T Consensus 46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~ 125 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 125 (1045)
T ss_dssp EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEEC
Confidence 4566777888889999999988876533 1 222222 256678888888 99999 788888887
Q ss_pred CC------CeEEEecCCCceeEe-------------------------------------------------eccCCCcc
Q 046226 110 DS------NVIRIWKQPEFTECG-------------------------------------------------RLKAKTSM 134 (434)
Q Consensus 110 ~d------g~i~iwd~~~~~~~~-------------------------------------------------~~~~~~~~ 134 (434)
.+ ..|.+|++.+++... .+..|...
T Consensus 126 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~ 205 (1045)
T 1k32_A 126 AMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTH 205 (1045)
T ss_dssp TTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSC
T ss_pred CcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCc
Confidence 54 357778775544221 12345667
Q ss_pred EEEEEEeCCEE-EEEEcCCeEEEeecCCCC-CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE
Q 046226 135 VVAMEVSHDRV-YAAYGDGKIRVWRSTWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA 212 (434)
Q Consensus 135 v~~l~~~~~~l-~~~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 212 (434)
+.++.|+++.+ +++..|+.+.+|++.... ....+ ..|. .+...+|+|+|++|+.+
T Consensus 206 v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l----------------------~~~~-~~~~~~~SpDG~~la~~ 262 (1045)
T 1k32_A 206 VSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKH----------------------TSFT-DYYPRHLNTDGRRILFS 262 (1045)
T ss_dssp CEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEEC----------------------CCCC-SSCEEEEEESSSCEEEE
T ss_pred ccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEe----------------------cCCC-CcceeeEcCCCCEEEEE
Confidence 77888888844 455567888888765321 11111 1233 46677999999999888
Q ss_pred ecCCcEEEEEcCCCeeEEEccc-----------CccCeEEEEEc-CCC-eEEEEeCCCeEEEEecccccCcceeEEEEEe
Q 046226 213 SLDKTIKVWRIRDSKCIETIQA-----------HSEPINALVVA-DDG-VLYSASDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 213 ~~dg~i~vwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
. ++.|++||+...+ +..+.. |...+.+++|+ |++ .|++++ ++.|.+|++.. . . ...+
T Consensus 263 ~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~---~---~-~~~~ 332 (1045)
T 1k32_A 263 K-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG---T---Y-VLKV 332 (1045)
T ss_dssp E-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS---S---B-EEEC
T ss_pred e-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC---C---c-eEEc
Confidence 5 8999999995443 445554 33468999999 999 677766 78999998761 1 1 1224
Q ss_pred ccccc-CeEEEEEecCCCEEEEEcCCCeEE-EEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEe
Q 046226 280 TAKYS-PVKTLTLTLDDGLLYGGCTDGYIH-YWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWA 355 (434)
Q Consensus 280 ~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd 355 (434)
..+.. .+..++|+ +|+.|+.++.++.+. +||+...... .+.+|...+..++|+ |++|++++.++.|++||
T Consensus 333 ~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-----~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 333 PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-----KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-----ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-----EecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 45555 78999999 999999988888888 8997643221 222666778888875 67999999999999999
Q ss_pred ccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCC----------eEEEEecCCCC
Q 046226 356 REQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG----------VLKMWRVTRPK 414 (434)
Q Consensus 356 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg----------~v~iw~~~~~~ 414 (434)
+.++ +......+|.+.+.+++|+|+ |++|++++.++ .|++||+.+++
T Consensus 407 ~~tg---~~~~~~~~~~~~v~~~~~SpD---------G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 407 LETG---KPTVIERSREAMITDFTISDN---------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TTTC---CEEEEEECSSSCCCCEEECTT---------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCC---ceEEeccCCCCCccceEECCC---------CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 9987 455556689999999999999 89998887755 99999998765
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=3.3e-22 Score=199.17 Aligned_cols=327 Identities=12% Similarity=0.016 Sum_probs=213.9
Q ss_pred CCCCCCCCCCCCCccCCCCC-CC-----cccc-----eeeeEEEeeccc------------------------cEEEEEE
Q 046226 56 SPLSSPRHPFNPTAAAGSSS-PE-----TSSS-----YRCISSVLKKDG------------------------QILCIAV 100 (434)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~-~~-----~~~~-----~~~~~~~~~h~~------------------------~v~~~~~ 100 (434)
..+..+.++++++.++..+. +. .+.. .+....+..|.. .|.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 34566778888988887776 54 3333 334444444432 3788899
Q ss_pred --cCCEEEEEeCCCeEEEecCCCce--eEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeecc
Q 046226 101 --GNGFIYTGSDSNVIRIWKQPEFT--ECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIP 174 (434)
Q Consensus 101 --~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~ 174 (434)
+|++|++++. +.|++||+.++. ....+..|...+..++|+|| .|+.++ ++.|++||+.+++......
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~----- 189 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTA----- 189 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCC-----
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEecc-----
Confidence 8999999986 999999998873 45567778888999999998 566665 6799999987653322110
Q ss_pred CCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC---------------------------------cEEEE
Q 046226 175 KTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK---------------------------------TIKVW 221 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------------------------~i~vw 221 (434)
.....+..- ............+..++|+|||++|++++.|+ .|++|
T Consensus 190 ~~~~~~~~g-~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNG-IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEES-CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceecc-ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 000000000 00000000112357899999999999987765 78999
Q ss_pred EcCC-CeeEEEcc--cCccCeEEEEEcCCC-eEEEEeC-----CCeEEEEecccccCcceeEEEEEeccccc----CeEE
Q 046226 222 RIRD-SKCIETIQ--AHSEPINALVVADDG-VLYSASD-----DATVRVWRRYFYSENQLHTLILTLTAKYS----PVKT 288 (434)
Q Consensus 222 d~~~-~~~~~~~~--~~~~~v~~~~~~~~~-~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~v~~ 288 (434)
|+.+ ++...... .|...+..++| ||+ .|++++. +..|++||+.. . ... .....+.. .+..
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~--g-~~~---~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS--N-QQR---VLAHETSPTWVPLHNS 341 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT--C-CEE---EEEEEECSSCCCCCSC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC--C-ceE---EEEEcCCCCcCCcCCc
Confidence 9988 87655443 37788999999 999 6665543 57899999872 1 111 11222221 4567
Q ss_pred EEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEE-Ee--eCCEE-EEecCCC--cEEEEeccCCCce
Q 046226 289 LTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL-AS--VANYV-ISGSADS--TSRVWAREQDGRH 362 (434)
Q Consensus 289 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~-~~--~~~~l-~s~~~dg--~i~iwd~~~~~~~ 362 (434)
++|+|||++++++..||.++||.++.... ...+..|...+..+ .| +++.| ++++.++ .++||++...+
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~----~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g-- 415 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK----AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG-- 415 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC----EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC--
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC----eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC--
Confidence 89999999999999999888887653222 22344566666554 35 46655 4555565 89999987532
Q ss_pred eeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC----CeEEEEecCCC
Q 046226 363 TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD----GVLKMWRVTRP 413 (434)
Q Consensus 363 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D----g~v~iw~~~~~ 413 (434)
.....+.. ...+..++|+|+ +++|+....+ +.+.+|+...+
T Consensus 416 ~~~~~l~~-~~~~~~~~~spd---------g~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 416 GQPQRLSK-APGMHSASFARN---------ASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp CCCEECCC-SCSEEEEEECTT---------SSEEEEEEEETTEEEEEEEEETTSC
T ss_pred CCeeeccc-CCCceEEEECCC---------CCEEEEEecCCCCCCeEEEEEcCCC
Confidence 33344444 566889999999 7777665443 46888987543
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=6e-22 Score=196.22 Aligned_cols=275 Identities=7% Similarity=-0.023 Sum_probs=183.1
Q ss_pred EEEcCCEEEEEeCCCeEEEecCCCceeE-eeccCCC-----------------ccEEEEEEeCCEEEEEEcCCeEEEeec
Q 046226 98 IAVGNGFIYTGSDSNVIRIWKQPEFTEC-GRLKAKT-----------------SMVVAMEVSHDRVYAAYGDGKIRVWRS 159 (434)
Q Consensus 98 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~-~~~~~~~-----------------~~v~~l~~~~~~l~~~s~dg~i~vwd~ 159 (434)
+.|.++.+++++.|+ | +||+.+++.+ ..+..+. ..|.+++|+|+..+..+.++.|++||+
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~~~i~~~d~ 108 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQGGLVGFDM 108 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEETTEEEEEET
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEECCEEEEEEC
Confidence 444366677777787 8 9999998773 3333322 469999999984444446799999999
Q ss_pred CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC-----CeeEEEccc
Q 046226 160 TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-----SKCIETIQA 234 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~ 234 (434)
.+++..... .+...+.+++|+|||++|+.+ .++.|++||+.+ ++.......
T Consensus 109 ~~~~~~~l~-----------------------~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~ 164 (706)
T 2z3z_A 109 LARKVTYLF-----------------------DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTID 164 (706)
T ss_dssp TTTEEEEEE-----------------------CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSC
T ss_pred CCCceEEcc-----------------------CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccC
Confidence 765322211 356678889999999999986 589999999998 776655544
Q ss_pred CccC--------------eEEEEEcCCC-eEEEEe---------------------------------CCCeEEEEeccc
Q 046226 235 HSEP--------------INALVVADDG-VLYSAS---------------------------------DDATVRVWRRYF 266 (434)
Q Consensus 235 ~~~~--------------v~~~~~~~~~-~l~s~~---------------------------------~dg~i~iwd~~~ 266 (434)
+... +.++.|+||| +|++++ .+..|++||+..
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 4433 4899999999 787776 446799999861
Q ss_pred ccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC-----eEEEEEcCcccccccccC-cccCcccceE--EEEe-
Q 046226 267 YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG-----YIHYWHKGWFSAQLQYGG-ALQGHTHAVM--CLAS- 337 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~-~~~~~~~~v~--~~~~- 337 (434)
. ..........+...+..++|+|||++|++++.++ .|++||+.+......... ........+. .++.
T Consensus 245 ~----~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 245 G----KTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp T----EEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred C----ceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 1 1111111124556789999999999999887765 899999876521111110 0001111123 3344
Q ss_pred -eCCEEEEecCCCcEEEEecc-CCCceeeEEEeeccccceeE-EEEeecccCCCCCCcccEEEE-eecCC----eEEEEe
Q 046226 338 -VANYVISGSADSTSRVWARE-QDGRHTMLAVLVGHRGPIRC-AIAFLGRFGEETEDEYCTICT-GSLDG----VLKMWR 409 (434)
Q Consensus 338 -~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s-~~~Dg----~v~iw~ 409 (434)
+|+++++++.|+.++||++. ++ ..+..+..|...+.. ++|+|+ ++.|+. ++.++ .|..|+
T Consensus 321 ~dg~~l~~~~~~g~~~l~~~~~~~---~~~~~l~~~~~~v~~~~~~spd---------g~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 321 SNNQFIWQSRRDGWNHLYLYDTTG---RLIRQVTKGEWEVTNFAGFDPK---------GTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CSSEEEEEECTTSSCEEEEEETTS---CEEEECCCSSSCEEEEEEECTT---------SSEEEEEESSSCTTCBEEEEEE
T ss_pred CCCEEEEEEccCCccEEEEEECCC---CEEEecCCCCeEEEeeeEEcCC---------CCEEEEEecCCCCceEEEEEEE
Confidence 66789999999999999887 33 456677778888877 799998 666654 44555 677777
Q ss_pred cCCCC
Q 046226 410 VTRPK 414 (434)
Q Consensus 410 ~~~~~ 414 (434)
+.+++
T Consensus 389 ~~~~~ 393 (706)
T 2z3z_A 389 IKGGK 393 (706)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 76654
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1.8e-20 Score=168.71 Aligned_cols=272 Identities=14% Similarity=0.130 Sum_probs=178.9
Q ss_pred eeccccEEEEEE--cCCEEEEEeCC-CeEEEecCC--Cce--eEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEee
Q 046226 89 LKKDGQILCIAV--GNGFIYTGSDS-NVIRIWKQP--EFT--ECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWR 158 (434)
Q Consensus 89 ~~h~~~v~~~~~--~~~~l~tg~~d-g~i~iwd~~--~~~--~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd 158 (434)
..|...+.+++| ++++|++++.+ +.|++|++. +++ .+..+..+. .+..++|+|+ .+++++. ++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 457778999999 88888888876 999999987 443 444555444 7889999997 5666665 88999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-cCCcEEEEEcCC-CeeEE----Ec
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-LDKTIKVWRIRD-SKCIE----TI 232 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~-~~~~~----~~ 232 (434)
+..+........ ......+.+++|+|+++++++++ .++.|.+||+.+ ++... .+
T Consensus 113 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 172 (343)
T 1ri6_A 113 LEDGLPVGVVDV--------------------VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEV 172 (343)
T ss_dssp EETTEEEEEEEE--------------------ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCCcccccccc--------------------ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccc
Confidence 852211111110 02334588999999999888887 899999999987 65432 22
Q ss_pred cc-CccCeEEEEEcCCC-eEE-EEeCCCeEEEEecccccCcce-eEEEEEeccc---ccCeEEEEEecCCCEEEE-EcCC
Q 046226 233 QA-HSEPINALVVADDG-VLY-SASDDATVRVWRRYFYSENQL-HTLILTLTAK---YSPVKTLTLTLDDGLLYG-GCTD 304 (434)
Q Consensus 233 ~~-~~~~v~~~~~~~~~-~l~-s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~---~~~v~~~~~~~~~~~l~~-~~~d 304 (434)
.. ....+.+++|+|++ .++ ++..++.|.+||+........ .......... ...+..++|+|++++|++ +..+
T Consensus 173 ~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~ 252 (343)
T 1ri6_A 173 TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA 252 (343)
T ss_dssp ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT
T ss_pred ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC
Confidence 22 34578899999999 554 445889999999862222111 1111112111 235678999999988874 4579
Q ss_pred CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEec-CCCcEEEEeccCC-CceeeEEEeeccccceeEEEE
Q 046226 305 GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGS-ADSTSRVWAREQD-GRHTMLAVLVGHRGPIRCAIA 380 (434)
Q Consensus 305 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~-~dg~i~iwd~~~~-~~~~~~~~~~~h~~~v~~~~~ 380 (434)
+.|.+||+............+..+.. +.+++|+ +++|++++ .++.|.+|+++.. +..+.+..+... ....+++|
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~ 330 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVV 330 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEE
Confidence 99999998732222222222323332 5666665 67777766 6899999966532 233455555543 44567888
Q ss_pred eec
Q 046226 381 FLG 383 (434)
Q Consensus 381 ~~~ 383 (434)
.++
T Consensus 331 ~~~ 333 (343)
T 1ri6_A 331 NAH 333 (343)
T ss_dssp EEE
T ss_pred Ecc
Confidence 776
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=7.6e-21 Score=188.33 Aligned_cols=291 Identities=10% Similarity=0.024 Sum_probs=192.1
Q ss_pred ccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCC-----CC
Q 046226 93 GQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTW-----DN 163 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~-----~~ 163 (434)
..|.+++| + +.++.+. |+.|++||+.+++... +..+...+.+++|+|+ .|+. +.|+.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCC
Confidence 46999999 6 6665554 5999999998887654 3446677889999998 5665 5789999999987 54
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe------------------------------
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS------------------------------ 213 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------------------------------ 213 (434)
....... ....+ ..+......+...+.+++|+|||++|++++
T Consensus 158 ~~~~~~~-----~~~~~---~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 158 AIAVTID-----GTETL---VYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CEESCSC-----CBTTE---EESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cEEeccC-----CCCCe---EcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 3322110 00000 000001112334468999999999999987
Q ss_pred ---cCCcEEEEEcCCCeeEEEcc--cCccCeEEEEEcCCC-eEEEEeCCC-----eEEEEecccccCcceeEEEEEe-cc
Q 046226 214 ---LDKTIKVWRIRDSKCIETIQ--AHSEPINALVVADDG-VLYSASDDA-----TVRVWRRYFYSENQLHTLILTL-TA 281 (434)
Q Consensus 214 ---~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~-~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~-~~ 281 (434)
.+..|++||+.+++...... .|...+.+++|+||+ .|++++.++ .|++||+.. ........... ..
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~--g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET--GRFVRTLFVETDKH 307 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT--CCEEEEEEEEECSS
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC--CceeeEEEEccCCC
Confidence 34679999999888655442 466789999999999 788877665 899999872 11111111111 11
Q ss_pred cccCeEEEEEec--CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEE-EEee--CCEEEE-ecCCC----cE
Q 046226 282 KYSPVKTLTLTL--DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMC-LASV--ANYVIS-GSADS----TS 351 (434)
Q Consensus 282 ~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~--~~~l~s-~~~dg----~i 351 (434)
....+..++|+| +|++++++..||.++||+++..... ...+..+...+.. ++|+ ++.|+. +..++ .|
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~---~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL---IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE---EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE---EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 111346789999 9999999999999999987522221 1233455555654 5665 665554 44444 56
Q ss_pred EEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC----CeEEEEecCCCC
Q 046226 352 RVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD----GVLKMWRVTRPK 414 (434)
Q Consensus 352 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D----g~v~iw~~~~~~ 414 (434)
+.||+.++. ...+ .|...+.+++|+|+ |++|+..+.+ +.|++||+.+++
T Consensus 385 ~~~d~~~~~----~~~l-~~~~~~~~~~~spd---------g~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 385 YCIDIKGGK----TKDL-TPESGMHRTQLSPD---------GSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEETTCCC----CEES-CCSSSEEEEEECTT---------SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEcCCCC----ceec-cCCCceEEEEECCC---------CCEEEEEecCCCCCcEEEEEECCCCe
Confidence 666766642 2233 36677899999999 7877766443 569999998775
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=8.3e-21 Score=175.89 Aligned_cols=200 Identities=12% Similarity=0.057 Sum_probs=144.1
Q ss_pred ccEEEEEE--cCCEEEEEeCCCeEEEecCCCce----------eEee-----ccCCCccEEEEEEeCC--EEE----EEE
Q 046226 93 GQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT----------ECGR-----LKAKTSMVVAMEVSHD--RVY----AAY 149 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~----------~~~~-----~~~~~~~v~~l~~~~~--~l~----~~s 149 (434)
..+..+++ ++.++++|+.|+ ++||+..... .+.. ...+...|.+++|+++ .|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 34666777 788999999888 8887642110 0110 1125667999999997 666 567
Q ss_pred cCCeEEEeecCCC--------CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC-CCEEEEEecCCcEEE
Q 046226 150 GDGKIRVWRSTWD--------NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS-DDTLYSASLDKTIKV 220 (434)
Q Consensus 150 ~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~v 220 (434)
.|+.|++||+... +.+.... .+.+|...|.+++|+|+ +.+|++++.||+|++
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~-------------------~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHK-------------------LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEE-------------------CCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeee-------------------ccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 7999999998653 1111111 12369999999999998 789999999999999
Q ss_pred EEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEe---cccccCeEEEEEecCCC
Q 046226 221 WRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTL---TAKYSPVKTLTLTLDDG 296 (434)
Q Consensus 221 wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~ 296 (434)
||++++..+.....|...|.+++|+|++ +|++|+.||.|++||++ ........... ..|...+.+++|++++.
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT---LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT---CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC---CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 9999988777777789999999999999 99999999999999986 11111110000 01234789999999887
Q ss_pred EEEEE-cCCC------eEEEEEcCcc
Q 046226 297 LLYGG-CTDG------YIHYWHKGWF 315 (434)
Q Consensus 297 ~l~~~-~~dg------~i~i~d~~~~ 315 (434)
++++. ..+| .+++|+++..
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 77543 3343 3899999754
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1e-20 Score=175.31 Aligned_cols=226 Identities=12% Similarity=0.115 Sum_probs=153.5
Q ss_pred CeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEecccc
Q 046226 112 NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDK 189 (434)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (434)
+.+++|+.... .+...+..++++++ .+++++.|+ +++|+........ . ...............
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~-----~--~~~~~~~~~~~~~~~ 87 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQN-----K--PGDDPNKIVDKVQGL 87 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCC-----C--TTCCTTCEEECCCCE
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhc-----c--cccCcccccccCccc
Confidence 56888875321 12345788888876 778887777 8898753211000 0 000000000000001
Q ss_pred ccCcCCCeEEEEEecCCCEEE----EEecCCcEEEEEcCCC--------e---eEEEcccCccCeEEEEEcCC-C-eEEE
Q 046226 190 MMKHMGPITSIAINVSDDTLY----SASLDKTIKVWRIRDS--------K---CIETIQAHSEPINALVVADD-G-VLYS 252 (434)
Q Consensus 190 ~~~~~~~v~~~~~~~~~~~l~----s~~~dg~i~vwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~-~l~s 252 (434)
...+...|.+++|+|++++|+ +|+.|+.|++||+.++ + .+..+.+|...|.+++|+|+ + +|++
T Consensus 88 ~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 124677899999999999999 7888999999998754 1 24566779999999999998 5 8999
Q ss_pred EeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc---cCcc
Q 046226 253 ASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL---QGHT 329 (434)
Q Consensus 253 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~ 329 (434)
++.||.|++||++. .........|...|.+++|+|+|++|++|+.||.|++||++ ........... ..|.
T Consensus 168 ~s~Dg~v~iwD~~~------~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 168 CLADGSIAVLQVTE------TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp EETTSCEEEEEESS------SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred EECCCeEEEEEcCC------CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence 99999999999982 12333445688899999999999999999999999999987 22111111111 1345
Q ss_pred cceEEEEeeCC--EEE-EecCCC------cEEEEeccCC
Q 046226 330 HAVMCLASVAN--YVI-SGSADS------TSRVWAREQD 359 (434)
Q Consensus 330 ~~v~~~~~~~~--~l~-s~~~dg------~i~iwd~~~~ 359 (434)
..|.++.|+++ +++ ....|| .+++|++...
T Consensus 241 ~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 241 VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 58899999855 332 233443 3899999865
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=6.8e-22 Score=196.39 Aligned_cols=279 Identities=9% Similarity=-0.013 Sum_probs=186.4
Q ss_pred EEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc---cEEEEEEeCC--EEEEEEcC---------CeEEEee
Q 046226 95 ILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS---MVVAMEVSHD--RVYAAYGD---------GKIRVWR 158 (434)
Q Consensus 95 v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~l~~~~~--~l~~~s~d---------g~i~vwd 158 (434)
+.+++| +|+++++ +.||+|++||+.+++....+..|.. .|.+++|+|| .|++++.+ +.|.+||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 456777 7787766 7899999999999988877777665 4999999998 78887764 7888999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccC
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP 238 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (434)
+.+++. ..+. . ..+|...+..++|+|||++|+.++. +.|++||+.+++.......+...
T Consensus 98 ~~~~~~-~~l~--~-----------------~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~ 156 (723)
T 1xfd_A 98 IPHGDP-QSLD--P-----------------PEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEG 156 (723)
T ss_dssp SSSCCC-EECC--C-----------------TTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTT
T ss_pred CCCCce-Eecc--C-----------------CccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCC
Confidence 987654 1111 0 0135556889999999999999885 79999999998876665554433
Q ss_pred e------------------EEEEEcCCC-eEEEEeCCC----------------------------------eEEEEecc
Q 046226 239 I------------------NALVVADDG-VLYSASDDA----------------------------------TVRVWRRY 265 (434)
Q Consensus 239 v------------------~~~~~~~~~-~l~s~~~dg----------------------------------~i~iwd~~ 265 (434)
+ .+++|+||| .|++++.|+ .|++||+.
T Consensus 157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred ceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 3 789999999 777776543 78888876
Q ss_pred cccCcceeEEEEEecc------cccCeEEEEEecCCCEEEEEcC----CCeEEEEEcCcccccccccCcccCcccce---
Q 046226 266 FYSENQLHTLILTLTA------KYSPVKTLTLTLDDGLLYGGCT----DGYIHYWHKGWFSAQLQYGGALQGHTHAV--- 332 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~v--- 332 (434)
... . ...+.. +...+..++|+|||++|++... +..|++||+.+......... .+...+
T Consensus 237 ~~~--~----~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~~~ 307 (723)
T 1xfd_A 237 GPT--H----DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED---ESEAWLHRQ 307 (723)
T ss_dssp SSC--C----CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE---ECSSCCCCC
T ss_pred CCc--e----eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe---ccCCEEecc
Confidence 211 1 112222 2567889999999998877643 36899999875443221111 111221
Q ss_pred -EEEEe--eCCEEEE--ecCCC------cEEEEeccCCCceeeEEEeeccccceeE-EEEeecccCCCCCCcccEEEEee
Q 046226 333 -MCLAS--VANYVIS--GSADS------TSRVWAREQDGRHTMLAVLVGHRGPIRC-AIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 333 -~~~~~--~~~~l~s--~~~dg------~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
..+.| +|+.|+. +..++ .|++||+..++...+...+..+...+.. ++|+|+ ++.|+..+
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd---------g~~l~~~~ 378 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK---------GNKIYFLS 378 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT---------TTEEEEEE
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC---------CCEEEEEE
Confidence 13444 5675553 55677 5666773233210013333333344444 689999 88887655
Q ss_pred cC---CeEEEEecCCC
Q 046226 401 LD---GVLKMWRVTRP 413 (434)
Q Consensus 401 ~D---g~v~iw~~~~~ 413 (434)
.+ +.+++|++...
T Consensus 379 ~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 379 TEDLPRRRQLYSANTV 394 (723)
T ss_dssp SSSCTTCCEEEEECSS
T ss_pred cCCCCcceEEEEEeCC
Confidence 54 88999998753
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=8.9e-21 Score=183.43 Aligned_cols=265 Identities=6% Similarity=-0.007 Sum_probs=184.8
Q ss_pred ccccEEEEEE--cCCEEEEEeC-CCeEEEecCCCceeEeeccCCC-ccEEEEEEeCCE-EEEEEc---CCeEEEeecCC-
Q 046226 91 KDGQILCIAV--GNGFIYTGSD-SNVIRIWKQPEFTECGRLKAKT-SMVVAMEVSHDR-VYAAYG---DGKIRVWRSTW- 161 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~~~-l~~~s~---dg~i~vwd~~~- 161 (434)
+..+|++++| ||+.||+++. ||+++||++.+++... +..|. ..+..++|+|+. ++++.. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCCeEEEEeccCCCCcceEEEEEecc
Confidence 3567999998 9999999887 9999999986666544 44444 689999999994 444443 45567766543
Q ss_pred -CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCE-EEEEecCCcEEEEEcCCCeeEEEcccCccCe
Q 046226 162 -DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAHSEPI 239 (434)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 239 (434)
......+ .....+...+|+|+++. +++...++.+.+||+.+++.......+.
T Consensus 99 ~~g~~~~l-----------------------~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--- 152 (582)
T 3o4h_A 99 RPGEEQRL-----------------------EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--- 152 (582)
T ss_dssp STTCCEEC-----------------------TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---
T ss_pred CCCccccc-----------------------cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---
Confidence 2211111 12223446688888853 3344445556699999987655554333
Q ss_pred EEEEEcCCC-eEEEEeCC----CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC--eEEEEEc
Q 046226 240 NALVVADDG-VLYSASDD----ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG--YIHYWHK 312 (434)
Q Consensus 240 ~~~~~~~~~-~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~ 312 (434)
.+++|+||| .|++++.+ +.|++||+.. + .. ..+..+...+..++|+|||++|+++..++ .|++||+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~--g-~~----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS--G-GL----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT--C-CC----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC--C-Cc----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 789999999 78877766 7899999761 1 11 23456777889999999999999888888 8999998
Q ss_pred CcccccccccCcccCcccceEE----------EEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEee
Q 046226 313 GWFSAQLQYGGALQGHTHAVMC----------LASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL 382 (434)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~v~~----------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 382 (434)
...... .+.+|...+.. ++.+|.++++++.|+.+++|++ + +... ...+.+.+++|+
T Consensus 226 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g---~~~~---~~~~~v~~~~~s- 291 (582)
T 3o4h_A 226 RDGSVE-----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--G---ERVE---APQGNHGRVVLW- 291 (582)
T ss_dssp TTCCEE-----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T---EEEC---CCSSEEEEEEEE-
T ss_pred CCCcEE-----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C---Ceec---cCCCceEEEEec-
Confidence 754433 23344443333 3345778899999999999999 4 3332 344678899999
Q ss_pred cccCCCCCCcccEEEEeecCCe---EEEEecCC
Q 046226 383 GRFGEETEDEYCTICTGSLDGV---LKMWRVTR 412 (434)
Q Consensus 383 ~~~~~~~~~~~~~l~s~~~Dg~---v~iw~~~~ 412 (434)
+ +.++++++.+.. |.+|+...
T Consensus 292 d---------g~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 292 R---------GKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp T---------TEEEEEEEETTEEEEEEEETTCC
T ss_pred C---------CEEEEEEcCCCCCCeEEEEcCCC
Confidence 7 888998888754 66666553
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=4.8e-20 Score=189.90 Aligned_cols=274 Identities=8% Similarity=-0.042 Sum_probs=203.9
Q ss_pred ccccEEEEEE---cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc-cEEEEEEeCC--EEEEEEcCCeEE-EeecCCCC
Q 046226 91 KDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS-MVVAMEVSHD--RVYAAYGDGKIR-VWRSTWDN 163 (434)
Q Consensus 91 h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~--~l~~~s~dg~i~-vwd~~~~~ 163 (434)
|.+.|.+++| +|++|++++ ++.|.+|+..+++.. .+..|.. .+..++|+ + .++.++.++.+. +||+..+.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 4456777777 577888887 789999999877654 3666777 89999999 8 688888888888 88876543
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEE
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV 243 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 243 (434)
.. .+ .+|...+..++|+|||++|++++.++.|++||+.+++....+..|...+.+++
T Consensus 371 ~~-~l----------------------~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~ 427 (1045)
T 1k32_A 371 AE-KF----------------------EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFT 427 (1045)
T ss_dssp EE-EC----------------------CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEE
T ss_pred ce-Ee----------------------cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceE
Confidence 21 11 14778899999999999999999999999999999998887778999999999
Q ss_pred EcCCC-eEEEEeCC----------CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEc
Q 046226 244 VADDG-VLYSASDD----------ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHK 312 (434)
Q Consensus 244 ~~~~~-~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 312 (434)
|+||+ +|++++.+ +.|++||+.. .. ...+..+...+..++|+|+|++|++++.++...+|+.
T Consensus 428 ~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~------g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 428 ISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG------RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT------TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ECCCCCeEEEEecCccccccCCCCCeEEEEECCC------Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 99999 77777654 4899999871 12 4456667778889999999999999998877777764
Q ss_pred Cccccc---------------------------------------ccccCcccCcccceEEEEeeC--CEEEE-------
Q 046226 313 GWFSAQ---------------------------------------LQYGGALQGHTHAVMCLASVA--NYVIS------- 344 (434)
Q Consensus 313 ~~~~~~---------------------------------------~~~~~~~~~~~~~v~~~~~~~--~~l~s------- 344 (434)
...... ......+..|...+..+.+++ .++++
T Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~ 580 (1045)
T 1k32_A 501 VVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEF 580 (1045)
T ss_dssp SSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSH
T ss_pred hccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcc
Confidence 321110 000112234556677777764 45664
Q ss_pred ------ecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 345 ------GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 345 ------~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
...+..|.+||+.++.. ..+. ..+..++++|+ |+.|++++.| .|++||+.+++
T Consensus 581 ~~~~~~~~~~~~l~~~d~~~~~~----~~l~---~~v~~~~~S~D---------G~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 581 AAYYQGAPEKGVLLKYDVKTRKV----TEVK---NNLTDLRLSAD---------RKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp HHHHHCCCCCEEEEEEETTTCCE----EEEE---EEEEEEEECTT---------SCEEEEEETT-SCEEEEESSCT
T ss_pred cccccccCCCceEEEEECCCCcE----EEee---cCcceEEECCC---------CCEEEEEcCC-cEEEEeCccCc
Confidence 12355788889887632 2222 56788999999 9999998866 89999998876
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=9.4e-21 Score=166.62 Aligned_cols=224 Identities=8% Similarity=-0.047 Sum_probs=165.4
Q ss_pred EEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC-C
Q 046226 148 AYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-S 226 (434)
Q Consensus 148 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~ 226 (434)
++.|+.|++||+.+++..... .|...|.+++|+|++++|++++ ++.|++||+.+ +
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~-----------------------~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~ 73 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVW-----------------------QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP 73 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-----------------------EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC
T ss_pred CCcceeEEEEeCCCCceeeec-----------------------cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC
Confidence 346899999998765433222 4888999999999999999987 88999999999 8
Q ss_pred eeEEEcccC-ccCeEEEEEcCCC-eEEEEe--CCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEE-EE
Q 046226 227 KCIETIQAH-SEPINALVVADDG-VLYSAS--DDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLY-GG 301 (434)
Q Consensus 227 ~~~~~~~~~-~~~v~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 301 (434)
+.......+ ...+.+++|+|++ .|++++ .++...+|.+...... ...+.. ...+..++|+|++++|+ ++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~-~~~~~~~~~spdg~~l~~~~ 147 (297)
T 2ojh_A 74 SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-----PRLMTK-NLPSYWHGWSPDGKSFTYCG 147 (297)
T ss_dssp SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-----CEECCS-SSSEEEEEECTTSSEEEEEE
T ss_pred CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-----eEEeec-CCCccceEECCCCCEEEEEE
Confidence 777666555 4678999999999 788877 4456666665421111 122222 23588899999999887 77
Q ss_pred cCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEec-CCCcEEEEeccCCCceeeEEEeeccccceeEE
Q 046226 302 CTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGS-ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378 (434)
Q Consensus 302 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 378 (434)
..++.+.+|+++...... ..+..+...+.++.|+ +++|+.++ .++.+++|++.... ..+..+..|...+..+
T Consensus 148 ~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~ 222 (297)
T 2ojh_A 148 IRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSVERITDSAYGDWFP 222 (297)
T ss_dssp EETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCEEECCCCSEEEEEE
T ss_pred CCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC--CCcEEEecCCcccCCe
Confidence 789999999975332222 2334566678888886 56666555 58999999987322 3456677788889999
Q ss_pred EEeecccCCCCCCcccEEEEeecC-----------CeEEEEecCCCCc
Q 046226 379 IAFLGRFGEETEDEYCTICTGSLD-----------GVLKMWRVTRPKS 415 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~s~~~D-----------g~v~iw~~~~~~~ 415 (434)
+|+|+ +++|++++.+ +.|++||+.+++.
T Consensus 223 ~~s~d---------g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 223 HPSPS---------GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EECTT---------SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred EECCC---------CCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 99999 8888888876 5699999988764
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=7.6e-20 Score=181.66 Aligned_cols=313 Identities=8% Similarity=-0.039 Sum_probs=189.5
Q ss_pred CCCCCCCCCCCccCCCCCCCccc-----ceeeeEEEeeccc---cEEEEEE--cCCEEEEEeCC---------CeEEEec
Q 046226 58 LSSPRHPFNPTAAAGSSSPETSS-----SYRCISSVLKKDG---QILCIAV--GNGFIYTGSDS---------NVIRIWK 118 (434)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~h~~---~v~~~~~--~~~~l~tg~~d---------g~i~iwd 118 (434)
...+.++++++.+++ +.+.++. +.++...+.+|.. .|.+++| +|++|++++.+ +.|.+||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 455667777776665 4455544 3445566666665 4999999 99999999774 7888999
Q ss_pred CCCcee--EeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC
Q 046226 119 QPEFTE--CGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM 194 (434)
Q Consensus 119 ~~~~~~--~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (434)
+.+++. +.....|...+..++|+|| .|+.++. +.|++||+.+++........ ....+..-.........-.
T Consensus 98 ~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~----~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTG----KEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCC----BTTTEEEEECCHHHHHTTS
T ss_pred CCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCC----CCCceECcccceeEEEEec
Confidence 998775 2222345556889999998 6666664 89999999876543322100 0000000000000000001
Q ss_pred CCeEEEEEecCCCEEEEEecCC----------------------------------cEEEEEcCCCeeEEEcccC-----
Q 046226 195 GPITSIAINVSDDTLYSASLDK----------------------------------TIKVWRIRDSKCIETIQAH----- 235 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg----------------------------------~i~vwd~~~~~~~~~~~~~----- 235 (434)
..+.+++|+|||++|++++.|+ .|++||+.+++....+..+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 2348999999999999887553 7999999988865666554
Q ss_pred -ccCeEEEEEcCCC-eEEEEeC----CCeEEEEecccccCcceeEEEEEecccccCe----EEEEEecCCCEEEE--EcC
Q 046226 236 -SEPINALVVADDG-VLYSASD----DATVRVWRRYFYSENQLHTLILTLTAKYSPV----KTLTLTLDDGLLYG--GCT 303 (434)
Q Consensus 236 -~~~v~~~~~~~~~-~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~--~~~ 303 (434)
...+..++|+||| ++++... +..|++||+.. . ....... ..+...+ ..++|+|||+.|+. +..
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~--g-~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 327 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT--G-VCTKKHE--DESEAWLHRQNEEPVFSKDGRKFFFIRAIP 327 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT--C-CEEEEEE--EECSSCCCCCCCCCEECTTSCSEEEEEEEC
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC--C-cceEEEE--eccCCEEeccCCCceEcCCCCeEEEEEecc
Confidence 5678999999999 6655542 35799999862 1 1111111 1122223 37899999997775 456
Q ss_pred CC------eEEEEEcCcccccccccCcccCcccceE---EEEeeCCEEEEecC-C--CcEEEEeccCCCceeeEEEeec-
Q 046226 304 DG------YIHYWHKGWFSAQLQYGGALQGHTHAVM---CLASVANYVISGSA-D--STSRVWAREQDGRHTMLAVLVG- 370 (434)
Q Consensus 304 dg------~i~i~d~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~- 370 (434)
++ .|.+||+...... .....+..+...+. +++.+++.|+..+. + +.++||++...+. .....+..
T Consensus 328 ~~~~~~~~~l~~~d~~~~~~~-~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~~ 405 (723)
T 1xfd_A 328 QGGRGKFYHITVSSSQPNSSN-DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCD 405 (723)
T ss_dssp CSSSSCEEEEEEECSSCCSSS-CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTT
T ss_pred cCCCcceeEEEEEeccCCCCc-cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC-CCcceeccc
Confidence 67 4666662111110 00112222222333 33445777765544 4 7899999875432 11222333
Q ss_pred --cccceeEEEEeec
Q 046226 371 --HRGPIRCAIAFLG 383 (434)
Q Consensus 371 --h~~~v~~~~~~~~ 383 (434)
|...+..++|+|+
T Consensus 406 ~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 406 LVENCTYFSASFSHS 420 (723)
T ss_dssp SSSSCCCCEEEECTT
T ss_pred ccCCCCeEEEEECCC
Confidence 6777889999999
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=1.9e-19 Score=162.69 Aligned_cols=242 Identities=12% Similarity=0.047 Sum_probs=174.1
Q ss_pred CccEEEEEEeCC--EEEEEEc-------CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE
Q 046226 132 TSMVVAMEVSHD--RVYAAYG-------DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202 (434)
Q Consensus 132 ~~~v~~l~~~~~--~l~~~s~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 202 (434)
...+..++|+|+ .+++++. ++.|.+||..+++....+. ....+..++|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-----------------------~~~~~~~~~~ 96 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-----------------------NDLKPFGATI 96 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-----------------------ESSCCCSEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-----------------------cCCCcceEEE
Confidence 345788999997 6777663 5689999998776555553 2344678999
Q ss_pred ecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccC---------eEEEEEcCCC-eEEEEe--CCCeEEEEecccccC
Q 046226 203 NVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEP---------INALVVADDG-VLYSAS--DDATVRVWRRYFYSE 269 (434)
Q Consensus 203 ~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~ 269 (434)
+|++++++++ ..++.|.+||..+++.+..+..+... +.+++++|++ .+++++ .++.|.+||+.
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~---- 172 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG---- 172 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT----
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC----
Confidence 9999966555 55799999999999988887764432 6889999998 555554 57899999987
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEec-
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGS- 346 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~- 346 (434)
.......+..+...+..++|+|+++++++++.++.|.+||+..............++...+.+++++ ++++++++
T Consensus 173 --~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 173 --NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp --TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred --CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 2233344443445678899999999999999999999999876544333222222344556666665 66655554
Q ss_pred CCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccE-EEEeecCCeEEEEecCCCCcc
Q 046226 347 ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCT-ICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 347 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.++.|.+||+.++ +.+..+.... ...++|+|+ +++ +++...++.|.+||+.+++..
T Consensus 251 ~~~~v~~~d~~~~---~~~~~~~~~~--~~~~~~s~d---------g~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 251 KAAEVLVVDTRNG---NILAKVAAPE--SLAVLFNPA---------RNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp SSSEEEEEETTTC---CEEEEEECSS--CCCEEEETT---------TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCC---cEEEEEEcCC--CceEEECCC---------CCEEEEEECCCCeEEEEECCCCeEE
Confidence 5599999999887 4444444433 256899998 764 455557999999999887654
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.8e-19 Score=161.42 Aligned_cols=251 Identities=10% Similarity=0.087 Sum_probs=166.0
Q ss_pred ceeeeEEEeeccccEEEEEE--cCCEEEEEeC-CCeEEEecCCCcee-EeeccCCCccEEEEEEeCC--EEEEEEcCC--
Q 046226 81 SYRCISSVLKKDGQILCIAV--GNGFIYTGSD-SNVIRIWKQPEFTE-CGRLKAKTSMVVAMEVSHD--RVYAAYGDG-- 152 (434)
Q Consensus 81 ~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~-dg~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~--~l~~~s~dg-- 152 (434)
+.+.+..+..+...+ +++| ++++|++++. ++.|.+||..+++. ...+..+..+..+++|+|+ .++++..++
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 107 (331)
T 3u4y_A 29 TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHP 107 (331)
T ss_dssp TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSS
T ss_pred ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCc
Confidence 344556666566667 8999 7876666655 89999999999887 7777777776666999997 666444442
Q ss_pred -eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCc-EEEEEcCCCeeE
Q 046226 153 -KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKT-IKVWRIRDSKCI 229 (434)
Q Consensus 153 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~vwd~~~~~~~ 229 (434)
.|.+||+..++.+..+. ......+++|+|++++++++ ..++. |.+|++.....+
T Consensus 108 ~~i~v~d~~~~~~~~~~~-----------------------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 108 FNMQSYSFLKNKFISTIP-----------------------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp CEEEEEETTTTEEEEEEE-----------------------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccEEEEECCCCCeEEEEE-----------------------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 89999998765544332 34456899999999866655 55588 999998754332
Q ss_pred ----EEcccCccCeEEEEEcCCC-eE-EEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-
Q 046226 230 ----ETIQAHSEPINALVVADDG-VL-YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC- 302 (434)
Q Consensus 230 ----~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 302 (434)
............++|+|++ ++ +++..++.|.+||+.... . ......+. ....+..++|+|+|++++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~--~-~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE--N-ITLLNAVG-TNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT--S-CEEEEEEE-CSSCCCCEEECTTSSEEEEECS
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc--c-cceeeecc-CCCCCceEEECCCCCEEEEEEc
Confidence 1112344568899999999 44 555578999999987222 1 11122233 235678899999999776665
Q ss_pred CCCeEEEEEcCcccccc--cccCcccCcccce-----EEEEeeCCEEE-EecCCCcEEEEeccCC
Q 046226 303 TDGYIHYWHKGWFSAQL--QYGGALQGHTHAV-----MCLASVANYVI-SGSADSTSRVWAREQD 359 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~v-----~~~~~~~~~l~-s~~~dg~i~iwd~~~~ 359 (434)
.++.|.+||+.+..... .....+..+.... .++..++++|+ ++..++.|.+||+...
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 57889999987544311 1111111111111 24445577665 4556779999999864
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=6.2e-20 Score=165.65 Aligned_cols=264 Identities=14% Similarity=0.064 Sum_probs=175.9
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCC-ccEEEEEEeCC--EEEEE-EcCCeEEEeecCCCCCceeeEeeeccCC
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKT-SMVVAMEVSHD--RVYAA-YGDGKIRVWRSTWDNGVKHVKLATIPKT 176 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~~--~l~~~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 176 (434)
++.++++++.++.|++||..+++.+..+..+. ..+..++|+|+ .++++ ..++.|.+||+.+++....+.....+
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~-- 87 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP-- 87 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST--
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc--
Confidence 67788999999999999999999888876543 25778999987 45544 46899999999876554443210000
Q ss_pred CCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC------------CcEEEEEcCCCee---EEEcccCccCeEE
Q 046226 177 GGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD------------KTIKVWRIRDSKC---IETIQAHSEPINA 241 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~---~~~~~~~~~~v~~ 241 (434)
......+..++|+|++++|++++.+ +.|.+||+.+++. +..+. +...+.+
T Consensus 88 --------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~ 152 (349)
T 1jmx_B 88 --------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYL 152 (349)
T ss_dssp --------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCC
T ss_pred --------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccc
Confidence 0012347889999999999998865 8999999988543 33333 3346889
Q ss_pred EEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccc------------------------cCeEEEEEecCCC-
Q 046226 242 LVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKY------------------------SPVKTLTLTLDDG- 296 (434)
Q Consensus 242 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------------------------~~v~~~~~~~~~~- 296 (434)
++|+|++.+++++. .|.+||+... .....+.... .....+++++++.
T Consensus 153 ~~~s~dg~l~~~~~--~i~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 153 MRAADDGSLYVAGP--DIYKMDVKTG------KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ 224 (349)
T ss_dssp EEECTTSCEEEESS--SEEEECTTTC------CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-----
T ss_pred eeECCCCcEEEccC--cEEEEeCCCC------ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcC
Confidence 99999995555443 4999998621 1111222111 0233455654431
Q ss_pred ----------EEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEE--e-eCCEEEEecCCCcEEEEeccCCCcee
Q 046226 297 ----------LLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLA--S-VANYVISGSADSTSRVWAREQDGRHT 363 (434)
Q Consensus 297 ----------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~s~~~dg~i~iwd~~~~~~~~ 363 (434)
++.....++.+.+|++.. +...+.++. . ++++++++ ++.|++||+.++ +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~---~ 286 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEFAD-------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR---K 286 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEEEE-------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT---E
T ss_pred CccccccceeEEEEeccCCcEEeccccc-------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccC---e
Confidence 222444556677666521 222344454 4 56688877 889999999987 5
Q ss_pred eEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 364 MLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 364 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
.+..+.. ...+.+++|+|+ +++|++++.++.|++||+.+++.+.
T Consensus 287 ~~~~~~~-~~~~~~~~~s~d---------g~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 287 LIKAANL-DHTYYCVAFDKK---------GDKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEEEEEC-SSCCCEEEECSS---------SSCEEEESBSSEEEEEETTTTEEEE
T ss_pred EEEEEcC-CCCccceEECCC---------CCEEEEecCCCeEEEEeccccceee
Confidence 5555543 345778999998 7888888889999999999877543
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=3.7e-18 Score=154.90 Aligned_cols=277 Identities=11% Similarity=0.045 Sum_probs=176.1
Q ss_pred EEEEEe----CCCeEEEecC--CCceeEeeccCCCccEEEEEEeCC--EEEEEEcC----CeEEEeecCCC-CCceeeEe
Q 046226 104 FIYTGS----DSNVIRIWKQ--PEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGD----GKIRVWRSTWD-NGVKHVKL 170 (434)
Q Consensus 104 ~l~tg~----~dg~i~iwd~--~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d----g~i~vwd~~~~-~~~~~~~~ 170 (434)
++++|+ .++.|.+|++ .+++.......+......++|+|+ .|++++.+ +.|.+|++... .....+..
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~ 94 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT 94 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE
Confidence 455553 4568999865 445433222116667788999997 68888775 89999998754 22222110
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-cCCcEEEEEcCCCeeEEEc------cc--------C
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-LDKTIKVWRIRDSKCIETI------QA--------H 235 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~------~~--------~ 235 (434)
. ..+......+++ ++++|++++ .++.|.+|++.....+..+ .+ +
T Consensus 95 ~-------------------~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 153 (361)
T 3scy_A 95 Q-------------------KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQT 153 (361)
T ss_dssp E-------------------ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCS
T ss_pred e-------------------ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccC
Confidence 0 024456677777 788777776 5789999999754332211 11 1
Q ss_pred ccCeEEEEEcCCC-eEEEE-eCCCeEEEEecccccC----c-cee--EEEEEecccccCeEEEEEecCCCEEEEEc-CCC
Q 046226 236 SEPINALVVADDG-VLYSA-SDDATVRVWRRYFYSE----N-QLH--TLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDG 305 (434)
Q Consensus 236 ~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~~----~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg 305 (434)
...+.+++|+|++ +++++ ..++.|.+|++..... . ... ............+..++|+|+|+++++++ .++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 2345889999999 45544 4589999999873221 1 111 01122233445678999999999887776 689
Q ss_pred eEEEEEcCcccccc-cccCcccCcccceEEEEee--CCEEEEecC--CCcEEEEeccC-CCceeeEEEeeccccceeEEE
Q 046226 306 YIHYWHKGWFSAQL-QYGGALQGHTHAVMCLASV--ANYVISGSA--DSTSRVWAREQ-DGRHTMLAVLVGHRGPIRCAI 379 (434)
Q Consensus 306 ~i~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~s~~~--dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~ 379 (434)
.|.+||+....... ........+.....+++++ |++|+++.. ++.|.+|++.. .+....+..+.. ...+.+++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 99999986332111 1111222333345666664 777766555 48999999962 233345555555 56788999
Q ss_pred EeecccCCCCCCcccEEEEee-cCCeEEEEecC
Q 046226 380 AFLGRFGEETEDEYCTICTGS-LDGVLKMWRVT 411 (434)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~s~~-~Dg~v~iw~~~ 411 (434)
|+|+ |++|++++ .++.|.+|+++
T Consensus 313 ~spd---------g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 313 ITPN---------GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECTT---------SCEEEEEETTTTEEEEEEEC
T ss_pred ECCC---------CCEEEEEECCCCCEEEEEEE
Confidence 9999 88888777 67999997665
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=2.1e-18 Score=156.48 Aligned_cols=276 Identities=13% Similarity=0.090 Sum_probs=173.3
Q ss_pred ccccEEEEEE--cCCEEEEEeCC----CeEEEecCCC--ce--eEeeccCCCccEEEEEEeCCEEEEEE-cCCeEEEeec
Q 046226 91 KDGQILCIAV--GNGFIYTGSDS----NVIRIWKQPE--FT--ECGRLKAKTSMVVAMEVSHDRVYAAY-GDGKIRVWRS 159 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~d----g~i~iwd~~~--~~--~~~~~~~~~~~v~~l~~~~~~l~~~s-~dg~i~vwd~ 159 (434)
|...+..++| ++++|++++.+ +.|.+|++.. ++ .+.....+......+++....+++++ .++.|.+|++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence 6677788888 89999999886 7999998755 43 33444445667788888444677766 5899999999
Q ss_pred CCCCCceeeEee-eccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-cCCcEEEEEcCCCee------E--
Q 046226 160 TWDNGVKHVKLA-TIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-LDKTIKVWRIRDSKC------I-- 229 (434)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~------~-- 229 (434)
.....+...... .....+ ......+...+.+++|+|+++++++++ .++.|.+|++..... +
T Consensus 128 ~~~g~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSG---------PDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp CTTSCBCSCSEEEECCCCC---------SCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CCCCcCcccceeEEccCCC---------CCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee
Confidence 765443222110 000000 000112344578999999999776655 478999999875431 1
Q ss_pred -----EEcccCccCeEEEEEcCCC-eEEEEe-CCCeEEEEecccccCcc-eeEEEEEecccccCeEEEEEecCCCEEEEE
Q 046226 230 -----ETIQAHSEPINALVVADDG-VLYSAS-DDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 230 -----~~~~~~~~~v~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 301 (434)
.....+......++|+|++ ++++++ .++.|.+||+.. ... ..........+......++|+|+|++|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~--g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD--GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET--TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC--CceEEeEEEecCCCCCCCcccEEECCCCCEEEEE
Confidence 1122345567899999999 666665 689999999871 111 111122223334557899999999998776
Q ss_pred cCC--CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEec-CCCcEEEEecc--CCCceeeEEEe-ecccc
Q 046226 302 CTD--GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGS-ADSTSRVWARE--QDGRHTMLAVL-VGHRG 373 (434)
Q Consensus 302 ~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~-~dg~i~iwd~~--~~~~~~~~~~~-~~h~~ 373 (434)
..+ +.|.+|++............+.. ...+.+++|+ |++|++++ .++.|.+|++. ++ +..... ..+..
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g---~~~~~~~~~~~~ 352 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG---LLTDIKKDIKVD 352 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC---CEEECSCCEECS
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC---cEeecceeeeCC
Confidence 654 89999998633222222222222 2345566665 77777776 67899997654 44 222221 22445
Q ss_pred ceeEEEEe
Q 046226 374 PIRCAIAF 381 (434)
Q Consensus 374 ~v~~~~~~ 381 (434)
.+.|+.|.
T Consensus 353 ~p~~v~~~ 360 (361)
T 3scy_A 353 KPVCLKFV 360 (361)
T ss_dssp SEEEEEEE
T ss_pred CCeEEEEc
Confidence 67888875
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=2.7e-18 Score=154.88 Aligned_cols=255 Identities=12% Similarity=0.098 Sum_probs=164.6
Q ss_pred eeccccEEEEEE--cCCEEEEEeC---CCeEEEecCCCce--eEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEee
Q 046226 89 LKKDGQILCIAV--GNGFIYTGSD---SNVIRIWKQPEFT--ECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWR 158 (434)
Q Consensus 89 ~~h~~~v~~~~~--~~~~l~tg~~---dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd 158 (434)
..+...+..++| +|+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|+ .|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 345667778888 777 555544 6899999997665 44444556777889999997 677777 689999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcC-CCeeE--EEccc-
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIR-DSKCI--ETIQA- 234 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~--~~~~~- 234 (434)
+........+........+.. ...+...+.+++|+|+++++++...++.|.+||+. +++.. ..+..
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~----------~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPR----------PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSS----------TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECC
T ss_pred eCCCCCeeecceeecCCCCCC----------ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcC
Confidence 964433332221111000000 01234468899999999966666678899999998 55432 22222
Q ss_pred CccCeEEEEEcCCC-eEEE-EeCCCeEEEEecccccCcceeEEEEEecccc------cCeEEEEEecCCCEEE-EEcCCC
Q 046226 235 HSEPINALVVADDG-VLYS-ASDDATVRVWRRYFYSENQLHTLILTLTAKY------SPVKTLTLTLDDGLLY-GGCTDG 305 (434)
Q Consensus 235 ~~~~v~~~~~~~~~-~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~-~~~~dg 305 (434)
....+..++|+|++ ++++ ...++.|.+|++..... ............ ..+..++|+|+|++|+ +...++
T Consensus 185 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 185 AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 23367889999999 4544 56789999999872111 222222222221 3488899999999875 455689
Q ss_pred eEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecC-CCcEEEEecc
Q 046226 306 YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSA-DSTSRVWARE 357 (434)
Q Consensus 306 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~-dg~i~iwd~~ 357 (434)
.|.+||+.... .......+..+...+..++|+ +++|++++. ++.|.+|+++
T Consensus 263 ~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 263 TLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99999986321 222223333444456667765 667777665 5899999554
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=1.2e-18 Score=158.18 Aligned_cols=276 Identities=13% Similarity=0.072 Sum_probs=174.1
Q ss_pred EEEEEeCC--CeEEEecC--CCceeEe--ecc-CCCccEEEEEEeCC--EEEEEEcCCeEEEeecC-CCCCceeeEeeec
Q 046226 104 FIYTGSDS--NVIRIWKQ--PEFTECG--RLK-AKTSMVVAMEVSHD--RVYAAYGDGKIRVWRST-WDNGVKHVKLATI 173 (434)
Q Consensus 104 ~l~tg~~d--g~i~iwd~--~~~~~~~--~~~-~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~-~~~~~~~~~~~~~ 173 (434)
.|++|+.. +.|.+|++ .+++... ... .....+..++|+|+ .|++++.+ .|.+|++. .++.......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~--- 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH--- 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE---
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe---
Confidence 45666653 56877654 4555432 221 23346788999997 68888877 99999986 4322111110
Q ss_pred cCCCCceeEEEeccccccCcCCCeEEEEEecCCCE--EEEEe-------------cCCcEEEEEcC-CCeeEEEcc----
Q 046226 174 PKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDT--LYSAS-------------LDKTIKVWRIR-DSKCIETIQ---- 233 (434)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s~~-------------~dg~i~vwd~~-~~~~~~~~~---- 233 (434)
+ .+ +.+.+++|+|++++ ++++. .+|.+.+|++. .++....+.
T Consensus 80 ~-----------------~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~ 141 (365)
T 1jof_A 80 P-----------------IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY 141 (365)
T ss_dssp E-----------------CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC
T ss_pred e-----------------cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe
Confidence 0 01 12455889999994 45553 68999999997 465544333
Q ss_pred cCccCeEEEEEcCCC-eEEEEe-CCCeEEEEecccccCcceeEEEEEec--ccccCeEEEEEecCCCEEEEEcC-CCeEE
Q 046226 234 AHSEPINALVVADDG-VLYSAS-DDATVRVWRRYFYSENQLHTLILTLT--AKYSPVKTLTLTLDDGLLYGGCT-DGYIH 308 (434)
Q Consensus 234 ~~~~~v~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-dg~i~ 308 (434)
.+...+.+++|+|+| +++++. .++.|++||+.. .+ .. ....... .+...+..++|+|+|+++++++. ++.|.
T Consensus 142 ~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~-~g-~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~ 218 (365)
T 1jof_A 142 QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA-SG-EV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRIC 218 (365)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TS-CE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC-CC-CE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEE
Confidence 245678999999999 666655 468999999862 11 11 1222222 23567899999999999888765 78999
Q ss_pred EEEcCccccccc----ccCcc----cCccc------ceEEEE-ee--CCEEEEecCC-C-----cEEEEeccCCCceeeE
Q 046226 309 YWHKGWFSAQLQ----YGGAL----QGHTH------AVMCLA-SV--ANYVISGSAD-S-----TSRVWAREQDGRHTML 365 (434)
Q Consensus 309 i~d~~~~~~~~~----~~~~~----~~~~~------~v~~~~-~~--~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~ 365 (434)
+|+++....... ....+ .+|.. .+..++ ++ |++|+++..+ + .|.+|++...+....+
T Consensus 219 v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 219 EYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp EEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE
T ss_pred EEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe
Confidence 998753221111 11111 22332 466666 54 6777766543 2 8999999632222222
Q ss_pred E-EeeccccceeEEEEee---cccCCCCCCcccEEEEeecC-CeEEEEecCCC
Q 046226 366 A-VLVGHRGPIRCAIAFL---GRFGEETEDEYCTICTGSLD-GVLKMWRVTRP 413 (434)
Q Consensus 366 ~-~~~~h~~~v~~~~~~~---~~~~~~~~~~~~~l~s~~~D-g~v~iw~~~~~ 413 (434)
. ....+...+..++|+| + |++|++++.+ +.|.+|+++..
T Consensus 299 ~~~~~~~~~~~~~~a~sp~~~d---------g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 299 LFLSPTPTSGGHSNAVSPCPWS---------DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEECSSCCTTCCCEEECTTC---------TTEEEEECSSSCEEEEEEEETT
T ss_pred eeeeecCCCCcccceecCCCcC---------CCEEEEEEcCCCeEEEEEEchh
Confidence 2 2334555677899999 6 8888888764 99999999765
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=8.5e-19 Score=157.27 Aligned_cols=249 Identities=10% Similarity=0.024 Sum_probs=170.2
Q ss_pred eeeeEEEeecc-c-cEEEEEE--cCCEE-EEEeCCCeEEEecCCCceeEeeccCC-----CccEEEEEEeCC--EEEEEE
Q 046226 82 YRCISSVLKKD-G-QILCIAV--GNGFI-YTGSDSNVIRIWKQPEFTECGRLKAK-----TSMVVAMEVSHD--RVYAAY 149 (434)
Q Consensus 82 ~~~~~~~~~h~-~-~v~~~~~--~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~l~~~~~--~l~~~s 149 (434)
.+.+..+.... . .+.+++| +++.+ +++..++.|.+||+.+++.+..+... ...+..++|+|+ .++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 21 MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEe
Confidence 34455554222 1 4788888 67655 55666889999999998887766532 225678999987 677665
Q ss_pred ------------cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCc
Q 046226 150 ------------GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKT 217 (434)
Q Consensus 150 ------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 217 (434)
.++.|.+||+.+++....+. ....+.+++|+|++++|+++ ++.
T Consensus 101 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------------------~~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 101 SPVRLELTHFEVQPTRVALYDAETLSRRKAFE-----------------------APRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp EEEEECSSCEEECCCEEEEEETTTTEEEEEEE-----------------------CCSSCCCEEECTTSSCEEEE--SSS
T ss_pred cccccccccccccCceEEEEECCCCcEEEEEe-----------------------CCCCcceeEECCCCCEEEEe--CCe
Confidence 57999999997654443331 23457788999999988888 688
Q ss_pred EEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEe-CCC-----------------------eEEEEecccccCcce
Q 046226 218 IKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSAS-DDA-----------------------TVRVWRRYFYSENQL 272 (434)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~dg-----------------------~i~iwd~~~~~~~~~ 272 (434)
|.+||+.+++.+..+..+... ..+.|+|++ .++..+ .++ .|.+||+... ..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~ 231 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG---EM 231 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC---CE
T ss_pred EEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC---Cc
Confidence 999999999988777654311 123678888 443333 333 4688888721 11
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCc
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADST 350 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~ 350 (434)
. ......+...+..++|+|++++++++ ++.|.+||+...+..... .. ...+.+++++ +++|++++.++.
T Consensus 232 ~--~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~----~~-~~~~~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 232 A--MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV----PL-PHSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp E--EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE----EC-SSCCCEEEECTTSCEEEEESBSSE
T ss_pred e--EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee----cC-CCceeeEEECCCCCEEEEEcCCCc
Confidence 1 23334455678899999999999988 799999998754332221 11 1234566665 678888888999
Q ss_pred EEEEeccCCCceeeEEEeecc
Q 046226 351 SRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 351 i~iwd~~~~~~~~~~~~~~~h 371 (434)
|++||+.++ +.+..+..+
T Consensus 303 i~v~d~~~~---~~~~~~~~~ 320 (337)
T 1pby_B 303 LAAYDAETL---EKKGQVDLP 320 (337)
T ss_dssp EEEEETTTC---CEEEEEECG
T ss_pred EEEEECcCC---cEEEEEEcC
Confidence 999999987 555555544
No 158
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=2.6e-17 Score=148.84 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=184.0
Q ss_pred CCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE----------cCCeEEEeecCCCCCceeeEeeeccCCC
Q 046226 110 DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY----------GDGKIRVWRSTWDNGVKHVKLATIPKTG 177 (434)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 177 (434)
.|+.|.+||..+++.+..+..+..+ .++|+|+ .++++. .++.|.+||..+.+.+..+.+....
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~--- 103 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR--- 103 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB---
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc---
Confidence 4789999999999998888877665 8999998 677775 3678999999876666555431100
Q ss_pred CceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEE-cccCccCeEEEEEcCCC--eEEE
Q 046226 178 GAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIET-IQAHSEPINALVVADDG--VLYS 252 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~--~l~s 252 (434)
..+......++|+|+|++|+++.. ++.|.+||+.+++.+.. +... ....+.+.|++ .+++
T Consensus 104 -------------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 104 -------------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp -------------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEE
T ss_pred -------------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEE
Confidence 013345678999999999998874 57999999999998887 6532 22335667766 7888
Q ss_pred EeCCCeEEEEecccccCcceeEEEE---EecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc----
Q 046226 253 ASDDATVRVWRRYFYSENQLHTLIL---TLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL---- 325 (434)
Q Consensus 253 ~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 325 (434)
.+.||.+.+|++... ........ .+.....+ ..+.+++++..++..+.++.|.++|+............+
T Consensus 169 ~~~dg~~~~v~~~~~--g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 169 ICGDGGLLTINLGED--GKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EETTSSEEEEEECTT--SSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred ECCCCcEEEEEECCC--CcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 899999999987511 11111111 11111222 233446777777778889999999986432111000000
Q ss_pred ------cCcccceEEEEeeCCEEEEecC-----------CCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCC
Q 046226 326 ------QGHTHAVMCLASVANYVISGSA-----------DSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 326 ------~~~~~~v~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 388 (434)
.........+..+++.++++.. ++.|.+||+.+. +.+..+..+. +.+++|+|+
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---~~v~~i~~~~--p~~ia~spd----- 315 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---QRVARIPGRD--ALSMTIDQQ----- 315 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---EEEEEEECTT--CCEEEEETT-----
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---cEEEEEecCC--eeEEEECCC-----
Confidence 0011112345556666555432 358999999987 7888888877 899999999
Q ss_pred CCCcccEEEEeecCCeEEEEecCCC--Ccccc
Q 046226 389 TEDEYCTICTGSLDGVLKMWRVTRP--KSSCG 418 (434)
Q Consensus 389 ~~~~~~~l~s~~~Dg~v~iw~~~~~--~~~~~ 418 (434)
|++|++++. +.|.+||..++ +.+..
T Consensus 316 ----g~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 316 ----RNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp ----TTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred ----CCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 888988886 99999999998 65443
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=3.5e-19 Score=176.71 Aligned_cols=277 Identities=11% Similarity=0.008 Sum_probs=176.6
Q ss_pred EEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc---cEEEEEEeCC--EEEEEEc---------CCeEEEeecC
Q 046226 97 CIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS---MVVAMEVSHD--RVYAAYG---------DGKIRVWRST 160 (434)
Q Consensus 97 ~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~l~~~~~--~l~~~s~---------dg~i~vwd~~ 160 (434)
.++| +++++++ +.|+.|++||+.+++....+..|.. .+.+++|+|| .|+.++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 4566 6655554 4699999999999887776665543 3899999998 6777765 7899999997
Q ss_pred CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc-ccCccCe
Q 046226 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QAHSEPI 239 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v 239 (434)
+++.+... .....+..++|+|||+.|+.+. ++.|++||+.+++..... .++...|
T Consensus 99 ~g~~~~~~-----------------------~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v 154 (719)
T 1z68_A 99 NGEFVRGN-----------------------ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKI 154 (719)
T ss_dssp TTEECCSS-----------------------CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTE
T ss_pred CCccccce-----------------------ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCe
Confidence 66431111 0124578899999999999986 789999999988765433 2222222
Q ss_pred -----------------EEEEEcCCC-eEEEEeCCC----------------------------------eEEEEecccc
Q 046226 240 -----------------NALVVADDG-VLYSASDDA----------------------------------TVRVWRRYFY 267 (434)
Q Consensus 240 -----------------~~~~~~~~~-~l~s~~~dg----------------------------------~i~iwd~~~~ 267 (434)
.+++|+||| .|++++.|. .|++||+...
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~ 234 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP 234 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH
T ss_pred EcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC
Confidence 489999999 788776542 7888887621
Q ss_pred cCcceeEEE--EEecccccCeEEEEEecCCCEEEEEcCC----CeEEEEE----cCcccccccccCcccCcccceE----
Q 046226 268 SENQLHTLI--LTLTAKYSPVKTLTLTLDDGLLYGGCTD----GYIHYWH----KGWFSAQLQYGGALQGHTHAVM---- 333 (434)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~~~~~~~~~~v~---- 333 (434)
......... ..+..+...+..++|+||++++++.... ..|.+|| +.+............+|...+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 314 (719)
T 1z68_A 235 AYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFV 314 (719)
T ss_dssp HHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSC
T ss_pred CccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccC
Confidence 110000000 1123466778999999998777764322 3488888 6543322111000024444433
Q ss_pred -EEEe--eCCEEE--EecCCC--cEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec-----
Q 046226 334 -CLAS--VANYVI--SGSADS--TSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL----- 401 (434)
Q Consensus 334 -~~~~--~~~~l~--s~~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~----- 401 (434)
.+.| +|+.++ +...+| .|.+||+.++. ...+..+...+..+.++ + ++.|+..+.
T Consensus 315 ~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~lt~~~~~v~~~~~~-d---------~~~i~~~~~~~~~~ 380 (719)
T 1z68_A 315 STPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQITSGKWEAINIFRV-T---------QDSLFYSSNEFEEY 380 (719)
T ss_dssp CCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----CEECSCSSSCEEEEEEE-C---------SSEEEEEESCGGGC
T ss_pred CccEECCCCCeEEEEEEccCCceEEEEEECCCCc----eEecccCceEEEEEEEE-e---------CCEEEEEEecCCCC
Confidence 4444 566433 454555 56677776652 34455566667777777 5 555555444
Q ss_pred CCeEEEEecCC
Q 046226 402 DGVLKMWRVTR 412 (434)
Q Consensus 402 Dg~v~iw~~~~ 412 (434)
++.+++|.+..
T Consensus 381 ~~~~~l~~~~~ 391 (719)
T 1z68_A 381 PGRRNIYRISI 391 (719)
T ss_dssp TTCBEEEEEEC
T ss_pred CceEEEEEEeC
Confidence 48899998864
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1.3e-17 Score=152.82 Aligned_cols=286 Identities=8% Similarity=-0.035 Sum_probs=185.8
Q ss_pred eeeEEEeeccccEEE-----EEE--cCCEEEEEeC-CC--eEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEc
Q 046226 83 RCISSVLKKDGQILC-----IAV--GNGFIYTGSD-SN--VIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYG 150 (434)
Q Consensus 83 ~~~~~~~~h~~~v~~-----~~~--~~~~l~tg~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~ 150 (434)
..+..+..|.+.... .+| +|++|+.++. +| .|.+||+.+++.......+...+..+.|+|+ .|+.++.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 345556666665655 667 8998888887 66 4888999998887777777666667789998 7888888
Q ss_pred CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEE--EEecCCCEEEEE----------------
Q 046226 151 DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSI--AINVSDDTLYSA---------------- 212 (434)
Q Consensus 151 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~s~---------------- 212 (434)
++.|++||+.+++...... .+...+... .+++++.+++..
T Consensus 101 ~~~l~~~d~~~g~~~~~~~----------------------~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~ 158 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQ----------------------VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKF 158 (388)
T ss_dssp TTEEEEEETTTCCEEEEEE----------------------CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred CCeEEEEECCCCcceeeee----------------------chhhcccccceeECCCCCeeccccccCcccccccccchh
Confidence 9999999998765443332 133333333 347888888742
Q ss_pred ------ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcC-CC-eEEEEeCC------CeEEEEecccccCcceeEEEEE
Q 046226 213 ------SLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD-DG-VLYSASDD------ATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 213 ------~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~ 278 (434)
..++.|.+||+.+++.. .+..+...+..+.|+| ++ .|+.+..+ ..|.++|+. .... ..
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~~~----~~ 230 (388)
T 3pe7_A 159 HEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED---GTNM----RK 230 (388)
T ss_dssp HHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT---SCCC----EE
T ss_pred hhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC---CCce----EE
Confidence 23468999999988654 4445667789999999 88 66665543 367777765 1111 11
Q ss_pred ecccc--cCeEEEEEecCCCEEEEEcC-CC----eEEEEEcCcccccccccCcccCcccc-----eEEEEeeCCEEEEe-
Q 046226 279 LTAKY--SPVKTLTLTLDDGLLYGGCT-DG----YIHYWHKGWFSAQLQYGGALQGHTHA-----VMCLASVANYVISG- 345 (434)
Q Consensus 279 ~~~~~--~~v~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~l~s~- 345 (434)
+..+. ..+...+|+|||+.|+..+. ++ .|++||+........ ..+.++... -..++.+|+.|+..
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL--TSMPACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE--EEECCEEEEEECTTSSEEEEEECCC----
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE--EcCCCceeeeecCCCCeEccCCCcceeEe
Confidence 22222 24778899999997765433 22 399999875543211 112221110 01466777766643
Q ss_pred --------cCCCcEEEEeccCCCceeeEEEeecccc-----------ceeEEEEeecccCCCCCCcccEEEEee-cCCeE
Q 046226 346 --------SADSTSRVWAREQDGRHTMLAVLVGHRG-----------PIRCAIAFLGRFGEETEDEYCTICTGS-LDGVL 405 (434)
Q Consensus 346 --------~~dg~i~iwd~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~~~~~~~l~s~~-~Dg~v 405 (434)
..+..|++||+.++ . +..+..|.. .+..++|+|+ |+.|+..+ .+|..
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~---~-~~~l~~~~~~~~~~~~~~~~~~~~~~~spD---------g~~l~~~s~~~g~~ 375 (388)
T 3pe7_A 309 QDDSGYKIENDPFLYVFNMKNG---T-QHRVARHDTSWKVFEGDRQVTHPHPSFTPD---------DKQILFTSDVHGKP 375 (388)
T ss_dssp --------CCCCEEEEEETTTT---E-EEEEEECCCCCCCBTTBSSTTCCCCEECTT---------SSEEEEEECTTSSC
T ss_pred eeccccccCCCCEEEEEeccCC---c-eEEeccccCcccccccccccCCCCccCCCC---------CCEEEEEecCCCce
Confidence 45678999999886 2 234445554 5778899998 77666554 57888
Q ss_pred EEEecCCC
Q 046226 406 KMWRVTRP 413 (434)
Q Consensus 406 ~iw~~~~~ 413 (434)
.||.++-.
T Consensus 376 ~l~~~~l~ 383 (388)
T 3pe7_A 376 ALYLATLP 383 (388)
T ss_dssp EEEEEECC
T ss_pred eEEEEECC
Confidence 88876543
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=5e-18 Score=168.47 Aligned_cols=322 Identities=10% Similarity=-0.009 Sum_probs=192.8
Q ss_pred CCCCCCCCccCCCCCCCcccce-----eeeEEEeeccc---cEEEEEE--cCCEEEEEeC---------CCeEEEecCCC
Q 046226 61 PRHPFNPTAAAGSSSPETSSSY-----RCISSVLKKDG---QILCIAV--GNGFIYTGSD---------SNVIRIWKQPE 121 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~---~v~~~~~--~~~~l~tg~~---------dg~i~iwd~~~ 121 (434)
+.+.+++..+++. .+.++..| ++...+.+|.. .|.+++| +|++|++++. ++.|++||+.+
T Consensus 21 ~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 21 PNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 3444555444333 34444443 34444444544 3889999 9999999876 78999999999
Q ss_pred ceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCC----
Q 046226 122 FTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMG---- 195 (434)
Q Consensus 122 ~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 195 (434)
++.+.... -...+..++|+|| .|+.+ .++.|++||+.+++...... .+.... .+.++..
T Consensus 100 g~~~~~~~-l~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~~~l~~------~~~~~~-------v~~g~~~~v~~ 164 (719)
T 1z68_A 100 GEFVRGNE-LPRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPPFQITF------NGRENK-------IFNGIPDWVYE 164 (719)
T ss_dssp TEECCSSC-CCSSBCCEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCC------CCBTTT-------EEESSCCHHHH
T ss_pred Ccccccee-cCcccccceECCCCCEEEEE-ECCeEEEEeCCCCCcEEEec------CCCcCC-------eEcccccceee
Confidence 87631111 1246888999998 56665 48899999998765432110 000000 0012222
Q ss_pred -----CeEEEEEecCCCEEEEEecCC----------------------------------cEEEEEcCCCeeE-------
Q 046226 196 -----PITSIAINVSDDTLYSASLDK----------------------------------TIKVWRIRDSKCI------- 229 (434)
Q Consensus 196 -----~v~~~~~~~~~~~l~s~~~dg----------------------------------~i~vwd~~~~~~~------- 229 (434)
...+++|+|||++|++++.|. .|++||+.+++..
T Consensus 165 ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 244 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV 244 (719)
T ss_dssp HHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC
T ss_pred eecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC
Confidence 225899999999999987652 7889999887653
Q ss_pred -EEcccCccCeEEEEEcCCC-eEEEEeCC----CeEEEEe----cccccCcceeEEEEEecccccCeE-----EEEEecC
Q 046226 230 -ETIQAHSEPINALVVADDG-VLYSASDD----ATVRVWR----RYFYSENQLHTLILTLTAKYSPVK-----TLTLTLD 294 (434)
Q Consensus 230 -~~~~~~~~~v~~~~~~~~~-~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~ 294 (434)
..+..|...+..++|+||+ ++++.... ..|.+|| +.......... .....+...+. .+.|+|+
T Consensus 245 ~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~spd 322 (719)
T 1z68_A 245 PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE--HIEESRTGWAGGFFVSTPVFSYD 322 (719)
T ss_dssp CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE--EEEECSSSCSSSSSCCCCEECTT
T ss_pred CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe--cccccCCceEccccCCccEECCC
Confidence 1234578889999999999 55553322 2488888 54111111100 00024445555 7899999
Q ss_pred CCEEEE--EcCCC--eEEEEEcCcccccccccCcccCcccceEEEE-eeCCEEEEecC-----CCcEEEEeccCC-Cc--
Q 046226 295 DGLLYG--GCTDG--YIHYWHKGWFSAQLQYGGALQGHTHAVMCLA-SVANYVISGSA-----DSTSRVWAREQD-GR-- 361 (434)
Q Consensus 295 ~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~s~~~-----dg~i~iwd~~~~-~~-- 361 (434)
|+.|+. ...+| .|.+||+.... .. .+..+...+..+. ++++.|+..+. ++.+++|.+... +.
T Consensus 323 g~~l~~~~~~~~g~~~l~~~~~~~~~--~~---~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~ 397 (719)
T 1z68_A 323 AISYYKIFSDKDGYKHIHYIKDTVEN--AI---QITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS 397 (719)
T ss_dssp SSCEEEEEECTTSCEEEEEESSCSTT--CE---ECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCC
T ss_pred CCeEEEEEEccCCceEEEEEECCCCc--eE---ecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCC
Confidence 996554 44555 46666654332 11 2223333344332 26666555554 488999988652 11
Q ss_pred eeeEEE-eeccccceeEEEEeecccCCCCCCcccEEE-EeecC--CeEEEEecCCCC
Q 046226 362 HTMLAV-LVGHRGPIRCAIAFLGRFGEETEDEYCTIC-TGSLD--GVLKMWRVTRPK 414 (434)
Q Consensus 362 ~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~~D--g~v~iw~~~~~~ 414 (434)
..++.. +.+|...+..+.|+|+ +++++ +++.+ ..+.+|++.+++
T Consensus 398 ~~~l~~~~~~~~~~~~~~~~s~d---------g~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 398 KKCVTCHLRKERCQYYTASFSDY---------AKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp EEESSTTTTTTTBCBEEEEECGG---------GSSEEEEECCBSSCEEEEECSSSCC
T ss_pred ceeccCccCCCCCceEEEEECCC---------CCEEEEEcCCCCCCeEEEEECCCCC
Confidence 112111 2236677888999998 65555 44444 578899987776
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=1e-17 Score=162.01 Aligned_cols=226 Identities=7% Similarity=0.001 Sum_probs=157.8
Q ss_pred CccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC-CCeEEEEEecCCC
Q 046226 132 TSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM-GPITSIAINVSDD 207 (434)
Q Consensus 132 ~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 207 (434)
..+|.+++|+|| .|+.++. ||+++||++..++. ..+ ..|. ..+..++|+|| +
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~l----------------------t~~~~~~~~~~~~spd-~ 76 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKL----------------------NREPINSVLDPHYGVG-R 76 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EEC----------------------CSSCCSEECEECTTCS-E
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-Eee----------------------ecccccccccccCCCC-e
Confidence 457999999998 7887776 99999999744322 111 1344 58999999999 7
Q ss_pred EEEEEec---CCcEEEEEcCC---CeeEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEe
Q 046226 208 TLYSASL---DKTIKVWRIRD---SKCIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 208 ~l~s~~~---dg~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
.+++++. +....+|.+.. +... .+... ..+...+|+|++ .+++.+.++.+.+||+.. .... .+.
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~---g~~~-~l~-- 148 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDG---GGLR-ELA-- 148 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEET---TEEE-EEE--
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccC---CcEE-Eee--
Confidence 7777764 44456655432 3322 33322 234456777776 444555555566999861 1111 111
Q ss_pred cccccCeEEEEEecCCCEEEEEcCC----CeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCC--cE
Q 046226 280 TAKYSPVKTLTLTLDDGLLYGGCTD----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADS--TS 351 (434)
Q Consensus 280 ~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg--~i 351 (434)
.+.. .+++|+|||++|++++.+ +.|++||+.+.... .+..|...+..++|+ |++|+++..++ .|
T Consensus 149 -~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-----~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 149 -RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-----VFDSGEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp -EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-----EECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred -cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-----EeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence 1212 789999999999988776 78999998654332 344677777788775 67888888888 89
Q ss_pred EEEeccCCCceeeEEEeeccccceeEEE--------EeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 352 RVWAREQDGRHTMLAVLVGHRGPIRCAI--------AFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 352 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
++||+.++ +.. .+.+|...+..++ |+|+ |.++++++.||.+++|++
T Consensus 221 ~~~d~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~spd---------g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 221 VTVDPRDG---SVE-DLELPSKDFSSYRPTAITWLGYLPD---------GRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEECTTTC---CEE-ECCCSCSHHHHHCCSEEEEEEECTT---------SCEEEEEEETTEEEEEET
T ss_pred EEEcCCCC---cEE-EccCCCcChhhhhhccccceeEcCC---------CcEEEEEEcCCcEEEEEE
Confidence 99999887 344 6677887777777 9998 889999999999999999
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=5.7e-16 Score=152.19 Aligned_cols=291 Identities=7% Similarity=-0.008 Sum_probs=179.9
Q ss_pred EeeccccEEEEEEcCCEE--EEE--eCCCeEEEecCCCceeEeeccCCCccEE---------EEEEe--CC--E-EEEEE
Q 046226 88 VLKKDGQILCIAVGNGFI--YTG--SDSNVIRIWKQPEFTECGRLKAKTSMVV---------AMEVS--HD--R-VYAAY 149 (434)
Q Consensus 88 ~~~h~~~v~~~~~~~~~l--~tg--~~dg~i~iwd~~~~~~~~~~~~~~~~v~---------~l~~~--~~--~-l~~~s 149 (434)
+.+|...|..++++++.+ +.. +.++...||....+.....+..+...+. ...|+ || . |+.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 456888999999955433 333 4478899998654555666766666655 56666 65 5 55544
Q ss_pred c-CCeEEEeecC--CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC----------C
Q 046226 150 G-DGKIRVWRST--WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD----------K 216 (434)
Q Consensus 150 ~-dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------g 216 (434)
. +..|.+|++. .......+. ..+ ...|...+.+++|+|||+.|+.++.+ .
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~--~~~---------------~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLT--PVS---------------AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECS--CCC---------------CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred CCCCeEEEEcCCCCCCCCCEecc--CCc---------------cCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 3 4566666654 102222111 000 00156678899999999999988876 5
Q ss_pred cEEEEEcCC------CeeEEEcc-cCccCeEEEEEcCCC-eEEEEeCC--------CeEEEEecccccCcceeEEEEEec
Q 046226 217 TIKVWRIRD------SKCIETIQ-AHSEPINALVVADDG-VLYSASDD--------ATVRVWRRYFYSENQLHTLILTLT 280 (434)
Q Consensus 217 ~i~vwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~-~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~ 280 (434)
.|++||+.+ ++. ..+. .+...+..++|+||| .|+.++.+ ..|++||+.. ............
T Consensus 162 ~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~--~g~~~~~~~l~~ 238 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE--DGRFADTRTLLG 238 (662)
T ss_dssp EEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT--TSCEEEEEEEEE
T ss_pred EEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC--CCcccccEEeCC
Confidence 899999987 554 4555 556778889999999 77766644 3799999861 111112222233
Q ss_pred ccccCeEEEEEecCCCEEEEEcCCC--eEEEEEcCcccccccccCcccCcccc--------eEEEEe--eCCEEEEecCC
Q 046226 281 AKYSPVKTLTLTLDDGLLYGGCTDG--YIHYWHKGWFSAQLQYGGALQGHTHA--------VMCLAS--VANYVISGSAD 348 (434)
Q Consensus 281 ~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~--------v~~~~~--~~~~l~s~~~d 348 (434)
.+...+..+.|+|||++++++..++ .|.+||+...... .+ ...+... +..+++ ++.+++++..
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~-~l---~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT-QL---CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE-ES---SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee-ec---ccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 4467889999999999888888888 5666665332211 11 1111111 334555 4678888888
Q ss_pred CcEEEEeccCCCceeeEEEeeccccceeEE-EEeecccCCCCCCcccEEEEeecCCe--EEEEecCCCC
Q 046226 349 STSRVWAREQDGRHTMLAVLVGHRGPIRCA-IAFLGRFGEETEDEYCTICTGSLDGV--LKMWRVTRPK 414 (434)
Q Consensus 349 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~l~s~~~Dg~--v~iw~~~~~~ 414 (434)
+.++||.+.... ..+..+..|.+.+..+ ++..+ .-++++++.+.. |.+|++.+++
T Consensus 314 ~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~s~~~~---------~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 314 GAAVLGILDPES--GELVDAAGPWTEWAATLTVSGT---------RAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SSCEEEEEETTT--TEEEECCSSCCEEEEEEEEETT---------EEEEEEEETTEEEEEEEEETTTCC
T ss_pred CccEEEEEECCC--CcEEEecCCCCeEEEEEecCCC---------EEEEEEcCCCCCCEEEEEECCCCc
Confidence 999999544221 2356677787777766 44332 334555565654 4455555554
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=5.6e-15 Score=129.21 Aligned_cols=245 Identities=9% Similarity=0.086 Sum_probs=163.2
Q ss_pred CCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe-cCC
Q 046226 130 AKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN-VSD 206 (434)
Q Consensus 130 ~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 206 (434)
++-....+++++++ .+++...++.|.+||.. ++....+... ....++...+..+++. +++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~----------------~~~~~~~~~p~~i~~~~~~g 89 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGEC----------------GKRDSQLLYPNRVAVVRNSG 89 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCB----------------SSSTTCBSSEEEEEEETTTT
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEeccc----------------CCCcccccCceEEEEEcCCC
Confidence 44567899999986 44444678999999976 3322222100 0001355678999995 566
Q ss_pred CEEEEEec-CCcEEEEEcCCCeeEEEccc-CccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccc
Q 046226 207 DTLYSASL-DKTIKVWRIRDSKCIETIQA-HSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKY 283 (434)
Q Consensus 207 ~~l~s~~~-dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 283 (434)
.++++... ++.|.+|| .+++.+..+.. +...+.++++.+++ ++++...++.|.+||.. .. .. .......+.
T Consensus 90 ~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~---g~-~~-~~~~~~~~~ 163 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN---GN-VL-HKFGCSKHL 163 (286)
T ss_dssp EEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT---SC-EE-EEEECTTTC
T ss_pred eEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC---CC-EE-EEeCCCCcc
Confidence 65555533 78999999 56777666643 34578999999999 66666778999999864 11 11 111112344
Q ss_pred cCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCC-cEEEEeccCCC
Q 046226 284 SPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADS-TSRVWAREQDG 360 (434)
Q Consensus 284 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg-~i~iwd~~~~~ 360 (434)
..+..++++++++++++...++.|++||..... ...+ ...++...+..++++ |+++++...++ .|++||.. +
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~~--~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g- 238 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-LRQI--GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-G- 238 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-EEEE--SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-S-
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-EEEE--ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-C-
Confidence 568999999999988888889999999974321 1111 112223456777775 66777777775 99999964 3
Q ss_pred ceeeEEEeecccc--ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 361 RHTMLAVLVGHRG--PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 361 ~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
..+..+..+.. .+.++++.|+ |+++++ +.|+.|++|++....
T Consensus 239 --~~~~~~~~~~~~~~~~~i~~~~~---------g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 239 --QLISALESKVKHAQCFDVALMDD---------GSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp --CEEEEEEESSCCSCEEEEEEETT---------TEEEEE-ETTTEEEEEECSCCC
T ss_pred --CEEEEEcccCCCCcceeEEECCC---------CcEEEE-CCCCeEEEEEccccc
Confidence 34445544433 4778999998 887777 679999999987654
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=8.6e-16 Score=138.35 Aligned_cols=261 Identities=11% Similarity=0.002 Sum_probs=167.8
Q ss_pred CCCCCCccCCCCCCCcccc-----eeeeEEEeecc-ccEEEEEE--cCCEE-EEEeCCCeEEEecCCCceeEeeccCCC-
Q 046226 63 HPFNPTAAAGSSSPETSSS-----YRCISSVLKKD-GQILCIAV--GNGFI-YTGSDSNVIRIWKQPEFTECGRLKAKT- 132 (434)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~-~~v~~~~~--~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~~- 132 (434)
+..+...+++.+.+..+.. .+.+..+..+. ..+..++| +++++ +++..++.|.+||+.+++.+..+..+.
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 3444555555555555433 34455555443 25677888 77755 455678999999999998887765432
Q ss_pred -----ccEEEEEEeCC--EEEEEEcC------------CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCc
Q 046226 133 -----SMVVAMEVSHD--RVYAAYGD------------GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKH 193 (434)
Q Consensus 133 -----~~v~~l~~~~~--~l~~~s~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
..+..++|+|+ .+++++.+ +.|.+||+.+++........ .+
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--------------------~~ 146 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--------------------PM 146 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--------------------EC
T ss_pred cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--------------------cC
Confidence 33788999997 77777755 99999999764332222111 24
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCcc------------------------CeEEEEEcCCC-
Q 046226 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE------------------------PINALVVADDG- 248 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~- 248 (434)
...+.+++|+|+++ +++++ +.|.+||+.+++.+..+..+.. ....+++.+++
T Consensus 147 ~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 147 PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 44688999999999 66654 3499999999988777654320 23345555433
Q ss_pred -----------eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEcCCCeEEEEEcCccc
Q 046226 249 -----------VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 249 -----------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
++.....++.+++|++. .....+..++++| ++++++++ ++.|.+||+...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 224 QDPATADLLYGYLSVDLKTGKTHTQEFA---------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK 286 (349)
T ss_dssp ---CCCEEEEEEEEEETTTCCEEEEEEE---------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred CCccccccceeEEEEeccCCcEEecccc---------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence 11122333444444432 2445788999999 99999988 8999999987544
Q ss_pred ccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeecc
Q 046226 317 AQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 317 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h 371 (434)
...... .+ ..+.+++++ +++|++++.++.|++||+.++ +.+..+...
T Consensus 287 ~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~---~~~~~~~~~ 335 (349)
T 1jmx_B 287 LIKAAN---LD--HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL---EKVKNIKLP 335 (349)
T ss_dssp EEEEEE---CS--SCCCEEEECSSSSCEEEESBSSEEEEEETTTT---EEEEEEECS
T ss_pred EEEEEc---CC--CCccceEECCCCCEEEEecCCCeEEEEecccc---ceeeeeecC
Confidence 322221 12 234456664 667777888999999999887 555555443
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=1.2e-15 Score=138.42 Aligned_cols=247 Identities=11% Similarity=0.071 Sum_probs=157.9
Q ss_pred cccEEEEEE--cCCEEEEEeCCCeEEEecCC-CceeEeecc--CCCccEEEEEEeCC-E---EEEEE-------------
Q 046226 92 DGQILCIAV--GNGFIYTGSDSNVIRIWKQP-EFTECGRLK--AKTSMVVAMEVSHD-R---VYAAY------------- 149 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~-~~~~~~~~~--~~~~~v~~l~~~~~-~---l~~~s------------- 149 (434)
...+..++| ++++|++++.+ .|.+|++. +++...... .+ +...+++|+|+ . ++++.
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 346778888 88999999888 99999987 776543322 11 22455788887 3 23332
Q ss_pred cCCeEEEeecCCC-CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec-CCcEEEEEcC-CC
Q 046226 150 GDGKIRVWRSTWD-NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL-DKTIKVWRIR-DS 226 (434)
Q Consensus 150 ~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~-~~ 226 (434)
.+|.+.+|++... +....+.... ..+...+.+++|+|+|++|+++.. ++.|++||+. ++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~------------------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYE------------------YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEE------------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred CCceEEEEccCCCCcCcceEeeEE------------------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC
Confidence 6899999998743 2222221100 024567899999999998887764 6799999998 67
Q ss_pred eeE--EEcc--cCccCeEEEEEcCCC-eEEEEe-CCCeEEEEecccccCccee--EEEEEecc----ccc------CeEE
Q 046226 227 KCI--ETIQ--AHSEPINALVVADDG-VLYSAS-DDATVRVWRRYFYSENQLH--TLILTLTA----KYS------PVKT 288 (434)
Q Consensus 227 ~~~--~~~~--~~~~~v~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~--~~~~~~~~----~~~------~v~~ 288 (434)
+.. ..+. .|...+..++|+|++ ++++++ .++.|.+|++....+.... .....+.. +.. .+..
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccccc
Confidence 643 3333 235678999999999 666665 4789999987521121111 11222221 121 4788
Q ss_pred EE-EecCCCEEEEEcCCC------eEEEEEcCcccccccccC-cccCcc--cceEEEEe---eCCEEEEecCC-CcEEEE
Q 046226 289 LT-LTLDDGLLYGGCTDG------YIHYWHKGWFSAQLQYGG-ALQGHT--HAVMCLAS---VANYVISGSAD-STSRVW 354 (434)
Q Consensus 289 ~~-~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~-~~~~~~--~~v~~~~~---~~~~l~s~~~d-g~i~iw 354 (434)
++ |+|||++|+++..+. .|.+|++... ....... ....+. ..-.+++. +|++|++++.+ +.|.+|
T Consensus 259 i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~-g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANKFELQGYIAGFKLRDC-GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT-SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred EEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC-CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 99 999999988776432 8999998631 1111100 011111 12234556 68898888764 899999
Q ss_pred eccCC
Q 046226 355 AREQD 359 (434)
Q Consensus 355 d~~~~ 359 (434)
++...
T Consensus 338 ~~~~~ 342 (365)
T 1jof_A 338 RWKDE 342 (365)
T ss_dssp EEETT
T ss_pred EEchh
Confidence 99865
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=1.2e-16 Score=158.68 Aligned_cols=273 Identities=11% Similarity=0.072 Sum_probs=176.9
Q ss_pred cEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCcc-----EEEEEEeCC--EEEEEEcC---------CeEE
Q 046226 94 QILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSM-----VVAMEVSHD--RVYAAYGD---------GKIR 155 (434)
Q Consensus 94 ~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~l~~~~~--~l~~~s~d---------g~i~ 155 (434)
...+++| ++++|+++ |+.|++||+.+++....+..|... ...+.|+|| .|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 3557888 78888886 899999999999887777776542 244788998 67777765 6677
Q ss_pred EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc-cc
Q 046226 156 VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI-QA 234 (434)
Q Consensus 156 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~ 234 (434)
+||+.+++.... ..|...+...+|+|||+.|+.+. ++.|++||+.+++..+.. .+
T Consensus 96 ~~d~~~~~~~~l-----------------------~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 96 IYDLNKRQLITE-----------------------ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp EEETTTTEECCS-----------------------SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC
T ss_pred EEECCCCcEEEc-----------------------ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC
Confidence 999987643221 14677899999999999999885 789999999888754422 22
Q ss_pred CccCe-----------------EEEEEcCCC-eEEEEeCC-CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC
Q 046226 235 HSEPI-----------------NALVVADDG-VLYSASDD-ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD 295 (434)
Q Consensus 235 ~~~~v-----------------~~~~~~~~~-~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 295 (434)
+...+ ..+.|+||| .|+.++.| +.+.+|++....... .+...+..+.+.+.|
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~---------~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES---------LQYPKTVRVPYPKAG 222 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT---------CSSCEEEEEECCBTT
T ss_pred CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC---------CCCCcceeecCCCCc
Confidence 22222 358999999 77777654 448888765222111 233445666676665
Q ss_pred CEEEEEcCCCeEEEEEcCc---cc--ccccccC--cccCcccceEEEEee--CCEEEEe----cCCCcEEEEeccCCCc-
Q 046226 296 GLLYGGCTDGYIHYWHKGW---FS--AQLQYGG--ALQGHTHAVMCLASV--ANYVISG----SADSTSRVWAREQDGR- 361 (434)
Q Consensus 296 ~~l~~~~~dg~i~i~d~~~---~~--~~~~~~~--~~~~~~~~v~~~~~~--~~~l~s~----~~dg~i~iwd~~~~~~- 361 (434)
.. .....|++||+.. .. ....+.. .+.+|...+..++|+ |+.++.. ..+..|++||+.++..
T Consensus 223 ~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~ 298 (740)
T 4a5s_A 223 AV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGR 298 (740)
T ss_dssp SC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTE
T ss_pred Cc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccc
Confidence 42 1233689999876 42 1111110 111366778777775 5544443 2344799999998741
Q ss_pred --eeeEEEe--ecccccee-----EEEEeecccCCCCCCcccEEE-Eee-cCC--eEEEEecCCCC
Q 046226 362 --HTMLAVL--VGHRGPIR-----CAIAFLGRFGEETEDEYCTIC-TGS-LDG--VLKMWRVTRPK 414 (434)
Q Consensus 362 --~~~~~~~--~~h~~~v~-----~~~~~~~~~~~~~~~~~~~l~-s~~-~Dg--~v~iw~~~~~~ 414 (434)
...+..+ .+|...|. ..+|+|+ |+.|+ ..+ .+| .|++|++..++
T Consensus 299 ~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD---------G~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 299 WNCLVARQHIEMSTTGWVGRFRPSEPHFTLD---------GNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp EEECGGGCEEEECSSSCSSSSSCCCCEECTT---------SSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred cceeEEEEeeeccCCceEccCcCCCceEcCC---------CCEEEEEEEcCCCceEEEEEECCCCc
Confidence 0011111 45666554 6788988 77766 555 344 58888887654
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=1.4e-14 Score=126.63 Aligned_cols=234 Identities=10% Similarity=0.100 Sum_probs=161.1
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeecc------CCCccEEEEEEe-CC-EEEEEEc--CCeEEEee
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLK------AKTSMVVAMEVS-HD-RVYAAYG--DGKIRVWR 158 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~------~~~~~v~~l~~~-~~-~l~~~s~--dg~i~vwd 158 (434)
|-..+.++++ +++++++...++.|.+||.. ++.+..+. .+...+..+++. ++ .++++.. ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 4457889999 67888888889999999976 55555543 244578999995 44 6666663 89999999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc--cCc
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ--AHS 236 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~ 236 (434)
. .++.+..+. ..+...+.+++++++++++++...++.|.+||.. ++.+..+. .+.
T Consensus 107 ~-~g~~~~~~~---------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 107 Q-YGQFVRKFG---------------------ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHL 163 (286)
T ss_dssp T-TSCEEEEEC---------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTC
T ss_pred C-CCcEEEEec---------------------CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCcc
Confidence 3 333322221 0244568999999999988877778999999964 56555554 344
Q ss_pred cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEec--ccccCeEEEEEecCCCEEEEEcCCC-eEEEEEc
Q 046226 237 EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT--AKYSPVKTLTLTLDDGLLYGGCTDG-YIHYWHK 312 (434)
Q Consensus 237 ~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~d~ 312 (434)
..+..+++++++ ++++...++.|++||.. . .....+. ++...+..++++++|+++++...++ .|.+||.
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~---g----~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNYE---G----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEETT---C----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcCC---C----CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 578999999999 66666778999999965 1 1222232 2235788999999999888887776 9999995
Q ss_pred CcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 313 GWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
... ....+ ........+.+++++ |+++++ +.|+.|++|++...
T Consensus 237 ~g~-~~~~~--~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 237 DGQ-LISAL--ESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TSC-EEEEE--EESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCC-EEEEE--cccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 421 11111 111122235667765 555555 67999999998653
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=4.2e-15 Score=132.74 Aligned_cols=204 Identities=10% Similarity=0.048 Sum_probs=141.3
Q ss_pred cCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCe-eEEEc---------ccCccCeEEEEEcC-CC-eEEEEe-CCCeE
Q 046226 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSK-CIETI---------QAHSEPINALVVAD-DG-VLYSAS-DDATV 259 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~-~l~s~~-~dg~i 259 (434)
+......++++++++++++...++.|++||..... .+..+ ..+......++++| ++ ++++.+ .++.|
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 45578999999999988888888999999986542 44544 23445788999999 67 566664 68999
Q ss_pred EEEecccccCcceeEEEEEe------cccccCeEEEEEecC-CCEEEEEcCCCeEEEEEcCcccccccccCcccCcccce
Q 046226 260 RVWRRYFYSENQLHTLILTL------TAKYSPVKTLTLTLD-DGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAV 332 (434)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 332 (434)
++||.. ..........- ..+......++++|+ +.++++...++.|++||..+......+ ....+...+
T Consensus 169 ~~~~~~---g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~--~~~~~~~~~ 243 (329)
T 3fvz_A 169 VQFSPS---GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI--KHASFGRNV 243 (329)
T ss_dssp EEECTT---SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE--CCTTTTTCE
T ss_pred EEEcCC---CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE--eccccCCCc
Confidence 999854 21111111000 122345889999998 777777788999999998633322222 112344456
Q ss_pred EEEEeeCCE--------EEEecCCCcEEEEeccCCCceeeEEEe---eccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 333 MCLASVANY--------VISGSADSTSRVWAREQDGRHTMLAVL---VGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 333 ~~~~~~~~~--------l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
.++++.+.. +++...+..|++||..++ +.+..+ .++...+..++++|+ |.++++...
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia~~~d---------G~lyvad~~ 311 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIVASED---------GTVYIGDAH 311 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEEECTT---------SEEEEEESS
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEEECCC---------CCEEEEECC
Confidence 666665433 333344568999999887 555555 467777899999998 889999999
Q ss_pred CCeEEEEecCCC
Q 046226 402 DGVLKMWRVTRP 413 (434)
Q Consensus 402 Dg~v~iw~~~~~ 413 (434)
++.|++|++...
T Consensus 312 ~~~I~~~~~~~~ 323 (329)
T 3fvz_A 312 TNTVWKFTLTEK 323 (329)
T ss_dssp SCCEEEEEEEEC
T ss_pred CCEEEEEeCCcc
Confidence 999999998743
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=7.5e-15 Score=131.44 Aligned_cols=263 Identities=10% Similarity=0.025 Sum_probs=167.5
Q ss_pred cEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EE-EEEEcCCeEEEeecCCCCCceeeE
Q 046226 94 QILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RV-YAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 94 ~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l-~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
.|.+++| ++..++..+.++.++.| .++....+..+...+.+++|+++ .+ +++..++.|.+||..+++......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 4556666 44555656778888888 34555566666777899999987 44 456678999999987554322110
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC----CcEEEEEcCCCeeEEEcc--cCccCeEEEE
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD----KTIKVWRIRDSKCIETIQ--AHSEPINALV 243 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~--~~~~~v~~~~ 243 (434)
.+...+.+++++++++++++...+ +.|.+||.++++....+. .+...+.+++
T Consensus 84 ----------------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 84 ----------------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMV 141 (333)
T ss_dssp ----------------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEE
T ss_pred ----------------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceE
Confidence 245679999999999888777666 689999998776543332 2445789999
Q ss_pred EcCCC-eEEEEeC------CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEE-EEcCCCeEEEEEcCcc
Q 046226 244 VADDG-VLYSASD------DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLY-GGCTDGYIHYWHKGWF 315 (434)
Q Consensus 244 ~~~~~-~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~ 315 (434)
+.+++ ++++... .+.|..+|.. . ...... ......+..++|+|+++.|+ +...++.|.+||+...
T Consensus 142 ~d~~g~l~v~~~~~~~~~~~~~l~~~~~~--~-~~~~~~----~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~ 214 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYSTNPLGGVYYVSPD--F-RTVTPI----IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 214 (333)
T ss_dssp ECTTSCEEEEECCCBTTBCCEEEEEECTT--S-CCEEEE----EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ECCCCCEEEEeccccccCCCceEEEEeCC--C-CEEEEe----ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCC
Confidence 99999 4444432 2455555543 1 111111 12234578899999998665 4456889999998532
Q ss_pred ccccc-----ccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeecccc------ceeEEEEee
Q 046226 316 SAQLQ-----YGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG------PIRCAIAFL 382 (434)
Q Consensus 316 ~~~~~-----~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~------~v~~~~~~~ 382 (434)
..... ....+.++ ..+..+.++ |+++++...++.|.+||.. + ..+..+..+.. .+.+++|+|
T Consensus 215 g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g---~~~~~~~~~~~~~g~~~~~~~~~~~~ 289 (333)
T 2dg1_A 215 GVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G---YPIGQILIPGRDEGHMLRSTHPQFIP 289 (333)
T ss_dssp SSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S---CEEEEEECTTGGGTCSCBCCEEEECT
T ss_pred CcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-C---CEEEEEEcCCCccccccCcceEEECC
Confidence 11110 00111222 345667765 6677777778899999984 3 34444444332 688999988
Q ss_pred cccCCCCCCcccEEEEeecC
Q 046226 383 GRFGEETEDEYCTICTGSLD 402 (434)
Q Consensus 383 ~~~~~~~~~~~~~l~s~~~D 402 (434)
+ +..|+.++.+
T Consensus 290 d---------g~~L~v~~~~ 300 (333)
T 2dg1_A 290 G---------TNQLIICSND 300 (333)
T ss_dssp T---------SCEEEEEEEC
T ss_pred C---------CCEEEEEeCc
Confidence 7 6556555544
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=2.3e-14 Score=129.01 Aligned_cols=254 Identities=9% Similarity=-0.008 Sum_probs=162.9
Q ss_pred EEEEEEcCCEEEEEe---------CCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcC---Ce--EEEee
Q 046226 95 ILCIAVGNGFIYTGS---------DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGD---GK--IRVWR 158 (434)
Q Consensus 95 v~~~~~~~~~l~tg~---------~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d---g~--i~vwd 158 (434)
+...+++|+.++... .++.|.+||+.+++... + ..+..++|+|+ .|+.++.+ +. |.+||
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 444444777766542 36789999998876543 3 56788999998 67666653 33 67777
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC-----------------------
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD----------------------- 215 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------------------- 215 (434)
+..++..... .+.. +..++|+|+++.|+.++.+
T Consensus 92 ~~~g~~~~l~-----------------------~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 147 (347)
T 2gop_A 92 LETLSSKKIL-----------------------EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFF 147 (347)
T ss_dssp TTTTEEEEEE-----------------------EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC-------
T ss_pred CCCCceEEEE-----------------------cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccc
Confidence 7654322211 1233 8999999999998887642
Q ss_pred ----CcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCC------C-eEEEEecccccCcceeEEEEEeccccc
Q 046226 216 ----KTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDD------A-TVRVWRRYFYSENQLHTLILTLTAKYS 284 (434)
Q Consensus 216 ----g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d------g-~i~iwd~~~~~~~~~~~~~~~~~~~~~ 284 (434)
..|++||+.+++.+..+.. . .+..+.|+|+++++++..+ . ...+|.+. .. ... .+ ..+ .
T Consensus 148 ~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~-~~~-~l---~~~-~ 217 (347)
T 2gop_A 148 DGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DG-KEE-KM---FEK-V 217 (347)
T ss_dssp --CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TT-EEE-EE---EEE-E
T ss_pred cCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CC-ceE-Ee---ccC-c
Confidence 5799999998887455554 3 7889999999944455443 2 44555544 11 111 11 112 3
Q ss_pred CeEEEEEecCCCEEEEEcCC--------CeEEEEEcCcccccccccCcccCcccceEE-EEeeCCEEEEecCCCcEEEEe
Q 046226 285 PVKTLTLTLDDGLLYGGCTD--------GYIHYWHKGWFSAQLQYGGALQGHTHAVMC-LASVANYVISGSADSTSRVWA 355 (434)
Q Consensus 285 ~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~l~s~~~dg~i~iwd 355 (434)
.+..+ +|+|++|+.++.+ ..|.+|| . .. ... ....+...+.. +.|+..++++++.++.++||
T Consensus 218 ~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~-~~~---l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~- 288 (347)
T 2gop_A 218 SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G-KE-VMG---ILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY- 288 (347)
T ss_dssp SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S-SC-EEE---SSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-
T ss_pred ceeeE--CCCCCEEEEEEccccCCccccceEEEEC-C-Cc-eEe---ccccCCcccCCccEEcCcEEEEEecCCcEEEE-
Confidence 44444 9999988877644 3677777 2 11 111 22345556664 66652288888999999999
Q ss_pred ccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeE-EEEecC
Q 046226 356 REQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVL-KMWRVT 411 (434)
Q Consensus 356 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v-~iw~~~ 411 (434)
+.++ .. ..+..+.+.|.+++|+| . ++++++.++.. .+|.++
T Consensus 289 ~~~g---~~-~~~~~~~~~v~~~~~s~-~----------~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 289 IWDG---EI-KPIAKGRHWIMGFDVDE-I----------VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EESS---SE-EEEECSSSEEEEEEESS-S----------EEEEEECSSSCCEEEEES
T ss_pred EcCC---ce-EEEecCCCeEEeeeeeC-c----------EEEEEcCCCChHHheEeC
Confidence 8843 22 33344577888898886 3 67777777765 788776
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=1.6e-16 Score=145.81 Aligned_cols=283 Identities=6% Similarity=-0.104 Sum_probs=168.4
Q ss_pred EEEEEE--cCCEEEEEeCC---CeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCcee
Q 046226 95 ILCIAV--GNGFIYTGSDS---NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKH 167 (434)
Q Consensus 95 v~~~~~--~~~~l~tg~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~ 167 (434)
+.+++| +|++|+....+ ..|.+||+.+++.......+......+.|+|+ .|+.++.++.|++||+..++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 556677 78887766543 47889999888765543333332333789997 788888899999999877654322
Q ss_pred eEeeeccCCCCceeEEEeccccccCcCCCe-----EEEEEecCCCEEEEE-----ecCCcEEEEEcCCCeeEEEcccCcc
Q 046226 168 VKLATIPKTGGAVRNLIVGKDKMMKHMGPI-----TSIAINVSDDTLYSA-----SLDKTIKVWRIRDSKCIETIQAHSE 237 (434)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~-----~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (434)
... +. ..... +........... ..+.|+|+++.++.+ ..+..|++||+.+++..... .+..
T Consensus 118 ~~~---~~--~~~~~---g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~ 188 (396)
T 3c5m_A 118 YTV---DE--EWKGY---GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTA 188 (396)
T ss_dssp EEC---CT--TEEEE---EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESS
T ss_pred Eec---cc--ccCCC---CCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCc
Confidence 211 00 00000 000000000000 013567888877654 35678999999988765444 4667
Q ss_pred CeEEEEEcC-CC-eEEEEeCC------CeEEEEecccccCcceeEEEEEeccc--ccCeEEEEEecCCCEEEEEcCC---
Q 046226 238 PINALVVAD-DG-VLYSASDD------ATVRVWRRYFYSENQLHTLILTLTAK--YSPVKTLTLTLDDGLLYGGCTD--- 304 (434)
Q Consensus 238 ~v~~~~~~~-~~-~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d--- 304 (434)
.+..+.|+| ++ .|+..+.+ ..|.+||+. .... ..+..+ ...+..++|+|+|++|+.++.+
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~~~----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED---GSNV----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT---SCCC----EESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECC---CCce----eEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 789999999 67 56655543 357788765 1111 111112 2357789999999987776543
Q ss_pred --CeEEEEEcCcccccccccCcccCcccceEEEEe-eCCEEEEec----------------CCCcEEEEeccCCCceeeE
Q 046226 305 --GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS-VANYVISGS----------------ADSTSRVWAREQDGRHTML 365 (434)
Q Consensus 305 --g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~ 365 (434)
+.|++||+........ ....++. ..++. +|++++.++ .+..|++||+.++..
T Consensus 262 ~~~~l~~~d~~~g~~~~l--~~~~~~~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---- 332 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEV--MVMPPCS---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---- 332 (396)
T ss_dssp CCEEEEEECTTTCCEEEE--EECCSEE---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC----
T ss_pred ccceEEEEECCCCCeEEe--eeCCCCC---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce----
Confidence 4599999865432211 1122221 34455 677777654 347899999987632
Q ss_pred EEeecccc-----------ceeEEEEeecccCCCCCCcccEEEEeec-CCeEEEEecC
Q 046226 366 AVLVGHRG-----------PIRCAIAFLGRFGEETEDEYCTICTGSL-DGVLKMWRVT 411 (434)
Q Consensus 366 ~~~~~h~~-----------~v~~~~~~~~~~~~~~~~~~~~l~s~~~-Dg~v~iw~~~ 411 (434)
..+..+.. .+..++|+|+ |+.|+.++. ++...+|.++
T Consensus 333 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 333 QKLCKHSTSWDVLDGDRQITHPHPSFTPN---------DDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CEEEECCCCCCCBTTBSSTTCCCCEECTT---------SSEEEEEECTTSSCEEEEEE
T ss_pred EEccCCCCccccccccccCCCCCceEccC---------CCeEEEEecCCCCceEEEEE
Confidence 22333443 2556788888 777766654 5666666554
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=1.5e-15 Score=149.27 Aligned_cols=227 Identities=8% Similarity=-0.039 Sum_probs=147.9
Q ss_pred cCCE-EEEEeC-CCeEEEecCC--CceeEeeccC-----CCccEEEEEEeCC--EEEEEEcC----------CeEEEeec
Q 046226 101 GNGF-IYTGSD-SNVIRIWKQP--EFTECGRLKA-----KTSMVVAMEVSHD--RVYAAYGD----------GKIRVWRS 159 (434)
Q Consensus 101 ~~~~-l~tg~~-dg~i~iwd~~--~~~~~~~~~~-----~~~~v~~l~~~~~--~l~~~s~d----------g~i~vwd~ 159 (434)
+|+. |+.++. +..|.+|++. .......+.. |...+..++|+|| .|+.++.+ ..|++||+
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 5777 665544 5677778775 2033444554 6778899999998 78777766 58999998
Q ss_pred CCC-----CCceeeEeeeccCCCCceeEEEecccccc-CcCCCeEEEEEecCCCEEEEEecC--------CcEEEEEcC-
Q 046226 160 TWD-----NGVKHVKLATIPKTGGAVRNLIVGKDKMM-KHMGPITSIAINVSDDTLYSASLD--------KTIKVWRIR- 224 (434)
Q Consensus 160 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~vwd~~- 224 (434)
... .....+ . .+...+..++|+|||++|+.++.+ ..|++||+.
T Consensus 169 ~~~~~~~~~~~~~l----------------------~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 169 DGSAAADRSAVREL----------------------SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp TSTTTTCGGGSEES----------------------SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred CCCccccCCceeEE----------------------EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 762 111111 1 244567788999999999987755 379999998
Q ss_pred CC---eeEEEcccCccCeEEEEEcCCC-eEEEEeCCC--eEEEEecccccCcceeEEEEEecccccC--------eEEEE
Q 046226 225 DS---KCIETIQAHSEPINALVVADDG-VLYSASDDA--TVRVWRRYFYSENQLHTLILTLTAKYSP--------VKTLT 290 (434)
Q Consensus 225 ~~---~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~--------v~~~~ 290 (434)
++ +.......+...+..+.|+||| +++++..++ .|.+||+. .. ........+... +..++
T Consensus 227 ~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~--~~----~~~~l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 227 DGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA--TG----AATQLCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp TSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT--TC----CEEESSCCSSBSSCCCCSTTCCSEE
T ss_pred CCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC--CC----ceeecccccccccCccccccCceEe
Confidence 56 4444444557889999999999 777888888 55555543 11 111111122111 46788
Q ss_pred EecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEE-EeeCCE--EEEecCCCc--EEEEeccCC
Q 046226 291 LTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL-ASVANY--VISGSADST--SRVWAREQD 359 (434)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~--l~s~~~dg~--i~iwd~~~~ 359 (434)
|++++++++++.. +.++||.++...... ..+..|...+..+ +++++. +++++.+.. |.+||+.++
T Consensus 301 ~~~~~~~~~~~~~-~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 301 PLANGLIAVVHGK-GAAVLGILDPESGEL---VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp ECTTSCEEEEEBS-SSCEEEEEETTTTEE---EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred EeCCCEEEEEEEc-CccEEEEEECCCCcE---EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 9999999999998 999999543222222 2344566677777 888773 344455544 555566555
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=4.8e-15 Score=135.68 Aligned_cols=256 Identities=8% Similarity=-0.058 Sum_probs=164.3
Q ss_pred EecCCCceeEeeccCCCccEEE-----EEEeCC--EEEEEEc-CC--eEEEeecCCCCCceeeEeeeccCCCCceeEEEe
Q 046226 116 IWKQPEFTECGRLKAKTSMVVA-----MEVSHD--RVYAAYG-DG--KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIV 185 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~v~~-----l~~~~~--~l~~~s~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
.+|..++..+..+..|...... .+|+|| .|+.++. ++ .|.+||+.+++.....
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt----------------- 76 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT----------------- 76 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-----------------
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-----------------
Confidence 4577788888888888776666 789997 6777776 66 4777887655332221
Q ss_pred ccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEE--EcCCC-eEEEE---------
Q 046226 186 GKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALV--VADDG-VLYSA--------- 253 (434)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~--~~~~~-~l~s~--------- 253 (434)
.++...+..++|+||++.|+.+..++.|++||+.+++....+..+...+.... +++++ +++..
T Consensus 77 -----~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 77 -----EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp -----CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred -----eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence 13444455678999999999999999999999999987766666665554443 47888 54422
Q ss_pred -------------eCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEcCC------CeEEEEEcC
Q 046226 254 -------------SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTD------GYIHYWHKG 313 (434)
Q Consensus 254 -------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~ 313 (434)
..+..|.+||+.. + .. ..+..+...+..+.|+| +|+.|+....+ ..|.++|+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~--g-~~----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKT--G-ES----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTT--C-CE----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ccccchhhhhhccCCcceEEEEECCC--C-ce----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 2446789999872 1 11 12223455788999999 99988877653 377788765
Q ss_pred cccccccccCcccCcc--cceEEEEee--CCEEEEecC-C----CcEEEEeccCCCceeeEEEeeccccc---eeEEEEe
Q 046226 314 WFSAQLQYGGALQGHT--HAVMCLASV--ANYVISGSA-D----STSRVWAREQDGRHTMLAVLVGHRGP---IRCAIAF 381 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~h~~~---v~~~~~~ 381 (434)
..... .+..+. ..+....|+ |+.|+..+. + ..|++||+.++.. ..+..+.++... ...+.|+
T Consensus 225 ~~~~~-----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~s 298 (388)
T 3pe7_A 225 GTNMR-----KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMV 298 (388)
T ss_dssp SCCCE-----ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEE
T ss_pred CCceE-----EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEc
Confidence 33221 111222 245566664 665544332 2 2399999998743 344444442111 1223688
Q ss_pred ecccCCCCCCcccEEEEe---------ecCCeEEEEecCCCCc
Q 046226 382 LGRFGEETEDEYCTICTG---------SLDGVLKMWRVTRPKS 415 (434)
Q Consensus 382 ~~~~~~~~~~~~~~l~s~---------~~Dg~v~iw~~~~~~~ 415 (434)
|+ |+.|+.. ..+..|++||+.+++.
T Consensus 299 pd---------g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 299 GD---------GSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EE---------ECCC------------CCCCEEEEEETTTTEE
T ss_pred cC---------CCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 88 7777643 5567999999987653
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=5.4e-14 Score=125.55 Aligned_cols=247 Identities=8% Similarity=0.049 Sum_probs=167.0
Q ss_pred cccEEEEEE--cCCEEEEEeCC------------------------CeEEEecCCCceeEeecc-CCCccEEEEEEeCC-
Q 046226 92 DGQILCIAV--GNGFIYTGSDS------------------------NVIRIWKQPEFTECGRLK-AKTSMVVAMEVSHD- 143 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~d------------------------g~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~- 143 (434)
-+.+.++++ +|+++++...+ +.|.+||..+++.+..+. .+-.....++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 356899999 78888888777 479999998888776654 34457899999987
Q ss_pred -EEEEEEcCCeEEEeecCCCC-CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEe-cCCcEE
Q 046226 144 -RVYAAYGDGKIRVWRSTWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSAS-LDKTIK 219 (434)
Q Consensus 144 -~l~~~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~ 219 (434)
.+++...++.|++||..... .+..+. .....+ .-.++......++++| ++.++++.+ .++.|+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~--~~~~~g-----------~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILG--RSMQPG-----------SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEES--BTTBCC-----------CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEec--ccCCCC-----------CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 45555568999999975432 222221 000000 0013555789999999 777777775 689999
Q ss_pred EEEcCCCeeEEEcccC----------ccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccccCcceeEEEEEe--cccccC
Q 046226 220 VWRIRDSKCIETIQAH----------SEPINALVVADD-G-VLYSASDDATVRVWRRYFYSENQLHTLILTL--TAKYSP 285 (434)
Q Consensus 220 vwd~~~~~~~~~~~~~----------~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~ 285 (434)
+|| .+++.+..+... ......|+++++ + ++++...++.|++||.. . ......+ ..+...
T Consensus 170 ~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~--~----G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 170 QFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD--T----KEFVREIKHASFGRN 242 (329)
T ss_dssp EEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT--T----CCEEEEECCTTTTTC
T ss_pred EEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC--C----CcEEEEEeccccCCC
Confidence 999 567777766432 234889999998 6 67777788999999975 1 1222222 345567
Q ss_pred eEEEEEec------CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEecc
Q 046226 286 VKTLTLTL------DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 286 v~~~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~ 357 (434)
+..++++| +++..++...+..|++||+........+ ....++...+.+++++ |+++++...++.|++|++.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~-~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF-KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE-CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE-cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 88899998 3333333344568999998654433222 1123555667788876 5578888889999999987
Q ss_pred CC
Q 046226 358 QD 359 (434)
Q Consensus 358 ~~ 359 (434)
..
T Consensus 322 ~~ 323 (329)
T 3fvz_A 322 EK 323 (329)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=1.5e-13 Score=130.42 Aligned_cols=275 Identities=9% Similarity=0.003 Sum_probs=189.1
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecC--CCCCceeeEeeeccCC
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRST--WDNGVKHVKLATIPKT 176 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~--~~~~~~~~~~~~~~~~ 176 (434)
.+.++++...++.|.++|..+++.+.++... ..+..+.++|+ ++++++.|+.|.+||+. +.+.+..+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~------- 237 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK------- 237 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE-------
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe-------
Confidence 4456777788999999999999999888754 35678999998 78889999999999985 444444332
Q ss_pred CCceeEEEeccccccCcCCCeEEEEEe----cCCCEEEEEec-CCcEEEEEcCCCeeEEEcccC-----------ccCeE
Q 046226 177 GGAVRNLIVGKDKMMKHMGPITSIAIN----VSDDTLYSASL-DKTIKVWRIRDSKCIETIQAH-----------SEPIN 240 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~-----------~~~v~ 240 (434)
.......++|+ |||++++++.. ++.|.++|..+.+.+..+... ...+.
T Consensus 238 ----------------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 238 ----------------IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp ----------------CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred ----------------cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 22345789999 69999887765 589999999999988776532 12577
Q ss_pred EEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCcccc
Q 046226 241 ALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSA 317 (434)
Q Consensus 241 ~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 317 (434)
.+..++++ .++....+|.|.++|..... .. ....+ ........+.|+|++++++++. .++.|.++|+.+.+.
T Consensus 302 ~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~---~~-~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 302 AILASHYRPEFIVNVKETGKILLVDYTDLN---NL-KTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEETTCSS---EE-EEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEecCCCc---cc-eeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 88888887 66677788999999976211 11 11122 2334577889999999987765 578999999976543
Q ss_pred cccccC-cccCcccceEEE-EeeCC-EEEEec-CCCcEEEEeccCCCc----eeeEEEeeccccceeEEEEeecccCCCC
Q 046226 318 QLQYGG-ALQGHTHAVMCL-ASVAN-YVISGS-ADSTSRVWAREQDGR----HTMLAVLVGHRGPIRCAIAFLGRFGEET 389 (434)
Q Consensus 318 ~~~~~~-~~~~~~~~v~~~-~~~~~-~l~s~~-~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 389 (434)
...... ....|.+.-..+ ..++. .++++. .++.|.++|..+.+. ++.+..+......-..+..+|+
T Consensus 377 ~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~------ 450 (567)
T 1qks_A 377 VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN------ 450 (567)
T ss_dssp EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT------
T ss_pred EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC------
Confidence 322211 112343222222 33333 444443 568999999987321 4566776655333344777888
Q ss_pred CCcccEEEEeec-------CCeEEEEecCCC
Q 046226 390 EDEYCTICTGSL-------DGVLKMWRVTRP 413 (434)
Q Consensus 390 ~~~~~~l~s~~~-------Dg~v~iw~~~~~ 413 (434)
+++|..... .++|.++|+.+.
T Consensus 451 ---~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 451 ---SQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp ---CSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred ---CCeEEEecCCCCCcccCceEEEEECCcc
Confidence 777777552 469999999876
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.67 E-value=3.4e-12 Score=112.00 Aligned_cols=276 Identities=11% Similarity=0.040 Sum_probs=181.2
Q ss_pred eccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEe-eccCCCccEEEEEEeCC-EEEEEEc-CCeEEEeecCCCCC
Q 046226 90 KKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECG-RLKAKTSMVVAMEVSHD-RVYAAYG-DGKIRVWRSTWDNG 164 (434)
Q Consensus 90 ~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~~~~~ 164 (434)
.+...+.++++ +|+++++...++.|.+||.. ++... ....+...+.++++.++ .++.+.. ++.|..||.. + .
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g-~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G-I 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-C
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C-c
Confidence 45567999999 67766666668899999987 44332 22334567899999886 5555554 7889999865 2 1
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEE-EcccCccCeEEEE
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIE-TIQAHSEPINALV 243 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~ 243 (434)
...+.. + .....+.++++.+++.++++...++.|.+||. +++... ........+..++
T Consensus 89 ~~~~~~---~-----------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 89 IKEYTL---P-----------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFIT 147 (299)
T ss_dssp EEEEEC---S-----------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred EEEEeC---C-----------------CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEE
Confidence 222210 0 13456889999999988887777889999998 554432 2333456789999
Q ss_pred EcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccccc
Q 046226 244 VADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYG 322 (434)
Q Consensus 244 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 322 (434)
+.+++ ++++...++.|..||.. .. .. ..........+..+++++++++.++...++.|.+||. ..... ..
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~~---g~-~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~- 218 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITES---GD-IT--EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EF- 218 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT---CC-EE--EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EE-
T ss_pred EcCCCCEEEEeCCCCEEEEEcCC---Cc-EE--EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EE-
Confidence 99998 55555567889999863 11 11 1122334456889999999997777777889999997 32211 11
Q ss_pred CcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEee
Q 046226 323 GALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 323 ~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
....+...+.++.++ |+++++...++.|..||.. + . .....+..+...+.++++ ++ +.+.++..
T Consensus 219 -~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g-~-~~~~~~~~~~~~~~~i~~-~~---------g~l~v~~~ 284 (299)
T 2z2n_A 219 -KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N-I-IEEYPIQIKSAEPHGICF-DG---------ETIWFAME 284 (299)
T ss_dssp -ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T-E-EEEEECSSSSCCEEEEEE-CS---------SCEEEEET
T ss_pred -ECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-C-c-eEEEeCCCCCCccceEEe-cC---------CCEEEEec
Confidence 122344567788776 5566665578899999983 3 1 122223445567888988 76 66666655
Q ss_pred cCCeEEEEecCCC
Q 046226 401 LDGVLKMWRVTRP 413 (434)
Q Consensus 401 ~Dg~v~iw~~~~~ 413 (434)
.+.|..++..++
T Consensus 285 -~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 -CDKIGKLTLIKD 296 (299)
T ss_dssp -TTEEEEEEEC--
T ss_pred -CCcEEEEEcCcc
Confidence 567777777654
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=4.2e-14 Score=140.44 Aligned_cols=322 Identities=11% Similarity=-0.054 Sum_probs=188.7
Q ss_pred CCCCCCCCCCccCCCCCCCcccc-----eeeeEEEeecccc-----EEEEEE--cCCEEEEEeCC---------CeEEEe
Q 046226 59 SSPRHPFNPTAAAGSSSPETSSS-----YRCISSVLKKDGQ-----ILCIAV--GNGFIYTGSDS---------NVIRIW 117 (434)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~-----v~~~~~--~~~~l~tg~~d---------g~i~iw 117 (434)
..+.+.+++..+++. +.++.. .++...+.+|... ...++| ||++|+.++.+ +.+.+|
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 345566666666664 445444 3455556666543 223566 99999999876 566799
Q ss_pred cCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC-
Q 046226 118 KQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM- 194 (434)
Q Consensus 118 d~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 194 (434)
|+.+++.. .+..|...+...+|+|| .|+.+ .|+.|++|++..++...... .+.... .+.++.
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~------~g~~~~-------~~~g~~~ 162 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITW------TGKEDI-------IYNGITD 162 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCS------CCBTTT-------EEESBCC
T ss_pred ECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcC------CCCccc-------eecCccc
Confidence 99998754 46677888999999998 56655 57899999987765332110 000000 001122
Q ss_pred --------CCeEEEEEecCCCEEEEEecCC------------------------------------cEEEEEcCC---Ce
Q 046226 195 --------GPITSIAINVSDDTLYSASLDK------------------------------------TIKVWRIRD---SK 227 (434)
Q Consensus 195 --------~~v~~~~~~~~~~~l~s~~~dg------------------------------------~i~vwd~~~---~~ 227 (434)
+....+.|+|||++|+.++.|. .|++||+.+ ++
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS
T ss_pred ccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC
Confidence 2334689999999999875332 488899988 73
Q ss_pred --eEEEcc------cCccCeEEEEEcCCC-eEEEEe----CCCeEEEEeccccc----CcceeEEEEEecccccCe----
Q 046226 228 --CIETIQ------AHSEPINALVVADDG-VLYSAS----DDATVRVWRRYFYS----ENQLHTLILTLTAKYSPV---- 286 (434)
Q Consensus 228 --~~~~~~------~~~~~v~~~~~~~~~-~l~s~~----~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~v---- 286 (434)
....+. +|...+..++|+||+ .++... .+..|.+||+.... ......... ..+...+
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~--~~~~~~v~~~~ 320 (740)
T 4a5s_A 243 NATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE--MSTTGWVGRFR 320 (740)
T ss_dssp CCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE--ECSSSCSSSSS
T ss_pred cceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee--ccCCceEccCc
Confidence 222333 377789999999999 454443 23479999987322 001111111 2233333
Q ss_pred -EEEEEecCCCEEE-EEc-CCC--eEEEEEcCcccccccccCcccCcccceEE-EEeeCCEEEE-ecC----CCcEEEEe
Q 046226 287 -KTLTLTLDDGLLY-GGC-TDG--YIHYWHKGWFSAQLQYGGALQGHTHAVMC-LASVANYVIS-GSA----DSTSRVWA 355 (434)
Q Consensus 287 -~~~~~~~~~~~l~-~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~l~s-~~~----dg~i~iwd 355 (434)
....|+|||+.|+ ..+ .+| .|++||+...... .+......+.. +.++++.|+. +.. .+...||.
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-----~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-----FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-----ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEE
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-----ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEE
Confidence 3678999999876 554 344 6777787543222 11122333333 3467765443 433 24455555
Q ss_pred ccCCCceeeEEEee----ccccceeEEEEeecccCCCCCCcccEEEEeecC---CeEEEEecCCCC
Q 046226 356 REQDGRHTMLAVLV----GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD---GVLKMWRVTRPK 414 (434)
Q Consensus 356 ~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D---g~v~iw~~~~~~ 414 (434)
+...+. .....+. +.......+.|+|+ +++++..... ..+.+++...++
T Consensus 396 v~~~g~-~~~~~lt~~~~~~~~~~~~~~~S~d---------g~~~~~~~s~~~~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 396 IQLIDY-TKVTCLSCELNPERCQYYSVSFSKE---------AKYYQLRCSGPGLPLYTLHSSVNDK 451 (740)
T ss_dssp EETTEE-EEEEESSTTTSTTTBCBEEEEECTT---------SSEEEEEECSBSSCEEEEEETTTTE
T ss_pred EECCCC-CcceeeccccCCCCCceEEEEECCC---------CCEEEEEeCCCCCCEEEEEECCCCc
Confidence 543211 2221232 23456788999998 6655533322 367778877654
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=1.5e-13 Score=122.51 Aligned_cols=262 Identities=7% Similarity=-0.057 Sum_probs=175.6
Q ss_pred CCCeEEEecCCCceeEeecc------CCCccEEEEEEeCCEEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeE
Q 046226 110 DSNVIRIWKQPEFTECGRLK------AKTSMVVAMEVSHDRVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRN 182 (434)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~------~~~~~v~~l~~~~~~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (434)
.++.|.+||.++++....+. ........+.+..+.++++.. ++.|.+||..+.+.+..+.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~------------- 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT------------- 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-------------
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-------------
Confidence 38899999999988776542 123456888888886666655 7999999998877655552
Q ss_pred EEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCc-----cCeEEEEEcCCCeEEEEe--C
Q 046226 183 LIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHS-----EPINALVVADDGVLYSAS--D 255 (434)
Q Consensus 183 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~l~s~~--~ 255 (434)
.......++++++++.+++...++.|.+||..+++....+.... .....+++ .++.++.+. .
T Consensus 82 ----------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~ 150 (328)
T 3dsm_A 82 ----------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSY 150 (328)
T ss_dssp ----------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTT
T ss_pred ----------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCC
Confidence 34567889998888444444378999999999998877766433 14556777 455544444 4
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC----------CeEEEEEcCcccccccccCcc
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD----------GYIHYWHKGWFSAQLQYGGAL 325 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~ 325 (434)
++.|.++|+.. ......+.. ......++++++|++++++..+ +.|.++|..+.+..... .+
T Consensus 151 ~~~v~viD~~t------~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~--~~ 221 (328)
T 3dsm_A 151 QNRILKIDTET------DKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF--KF 221 (328)
T ss_dssp CCEEEEEETTT------TEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE--EC
T ss_pred CCEEEEEECCC------CeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE--ec
Confidence 88999999872 122222222 2345678999999877776654 78999998654332221 11
Q ss_pred cCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEe----
Q 046226 326 QGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG---- 399 (434)
Q Consensus 326 ~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~---- 399 (434)
. .......++++ +++|+++.. .|.+||..++... ....+..+......++++|+. +.+.++.
T Consensus 222 ~-~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~-~~~~~~~~~~~p~gi~vdp~~--------g~lyva~~~~y 289 (328)
T 3dsm_A 222 K-LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP-VRPFLEFRDTKYYGLTVNPNN--------GEVYVADAIDY 289 (328)
T ss_dssp C-TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC-SSCSBCCCSSCEEEEEECTTT--------CCEEEEECTTS
T ss_pred C-CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee-eeeeecCCCCceEEEEEcCCC--------CeEEEEccccc
Confidence 1 11245677776 667776654 8999999876321 111122224567889999853 6777776
Q ss_pred ecCCeEEEEecCCCCccc
Q 046226 400 SLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~~ 417 (434)
..++.|.+||.. ++.+.
T Consensus 290 ~~~~~V~v~d~~-g~~~~ 306 (328)
T 3dsm_A 290 QQQGIVYRYSPQ-GKLID 306 (328)
T ss_dssp SSEEEEEEECTT-CCEEE
T ss_pred ccCCEEEEECCC-CCEEE
Confidence 678999999988 66543
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=6e-13 Score=118.99 Aligned_cols=267 Identities=13% Similarity=0.041 Sum_probs=166.0
Q ss_pred CCCCCCCCCCCccCCCCCCCcccce--eeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc
Q 046226 58 LSSPRHPFNPTAAAGSSSPETSSSY--RCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS 133 (434)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~ 133 (434)
+.+..+.++...+.....+..+..+ +....+..+...+.+++| ++++++++..++.|.+||..+++.......+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 87 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA 87 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS
T ss_pred cceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC
Confidence 3344445555555555445554444 334456667778899999 778778888899999999988776554445667
Q ss_pred cEEEEEEeCC-EEEEEEc-C----CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCC
Q 046226 134 MVVAMEVSHD-RVYAAYG-D----GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDD 207 (434)
Q Consensus 134 ~v~~l~~~~~-~l~~~s~-d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 207 (434)
.+.+++++++ .++++.. + +.|.+||........... . ..+...+.+++++|+++
T Consensus 88 ~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~--~------------------~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 88 NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE--D------------------LSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC--S------------------SSSCCCEEEEEECTTSC
T ss_pred CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc--c------------------CccCCcccceEECCCCC
Confidence 8999999987 4555544 4 589999987554321110 0 01345789999999998
Q ss_pred EEEEEec------CCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eE-EEEeCCCeEEEEecccccCcceeE----E
Q 046226 208 TLYSASL------DKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VL-YSASDDATVRVWRRYFYSENQLHT----L 275 (434)
Q Consensus 208 ~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~----~ 275 (434)
++++... .+.|..+|..+++... +......+..++|++++ .+ ++...++.|.+||+.... ..... .
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~ 225 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG-VTIQPFGATI 225 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEE
T ss_pred EEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC-cCcccccceE
Confidence 7776653 3567777766554432 32334467899999998 45 455567899999985211 11111 1
Q ss_pred EEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc--cCcccceEEEEee--CCEEEEecCC
Q 046226 276 ILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL--QGHTHAVMCLASV--ANYVISGSAD 348 (434)
Q Consensus 276 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~l~s~~~d 348 (434)
......+ ..+..++++++|+++++...++.|.+||.... ....+.... .+|...+.+++++ ++.|+.++.+
T Consensus 226 ~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 226 PYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY-PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC-EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCC-EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1112222 35778999999998888777899999997421 111111000 1222256667764 4566655554
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=1.4e-13 Score=136.07 Aligned_cols=243 Identities=10% Similarity=0.020 Sum_probs=157.3
Q ss_pred CCccEEEEEEeCC--EEEEEEcC-C----eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 131 KTSMVVAMEVSHD--RVYAAYGD-G----KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 131 ~~~~v~~l~~~~~--~l~~~s~d-g----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
|...+..++|+|| .|+.+..+ | .|++||+.+++...... ....+..++|+
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-----------------------~~~~~~~~~ws 179 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-----------------------ERVKFSCMAWT 179 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-----------------------EEECSCCEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-----------------------cCcccceEEEE
Confidence 4456889999998 56655543 3 89999998765433210 11226779999
Q ss_pred cCCCEEEEEecCCc----------------EEEEEcCCCe----eEEEcccCccCeEEEEEcCCC-eEEEEeC-----CC
Q 046226 204 VSDDTLYSASLDKT----------------IKVWRIRDSK----CIETIQAHSEPINALVVADDG-VLYSASD-----DA 257 (434)
Q Consensus 204 ~~~~~l~s~~~dg~----------------i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~l~s~~~-----dg 257 (434)
|||+.|+.+..++. |++|++.+++ .+.....+...+..+.|+||+ +|+.++. +.
T Consensus 180 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 180 HDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp TTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred eCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 99999999887766 9999998875 222333345567899999999 6665543 56
Q ss_pred eEEEEeccccc----CcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC----CeEEEEEcCcccccccccCcccCcc
Q 046226 258 TVRVWRRYFYS----ENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD----GYIHYWHKGWFSAQLQYGGALQGHT 329 (434)
Q Consensus 258 ~i~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~ 329 (434)
.|.+||+.... .... ...+..+...+.. .|+++|+.|+..+.+ +.|.+||+...... . ...+..|.
T Consensus 260 ~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~-~~~l~~~~ 333 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILK---WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-K-WKVLVPEH 333 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCC---CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-G-CEEEECCC
T ss_pred EEEEEECcccccccCCccc---eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-c-ceeccCCC
Confidence 89999987210 1111 1122334444444 488888887766553 36999998654311 0 01222332
Q ss_pred c--ceEEEEee-CC-EEEEecCCCc--EEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEE-Eee--
Q 046226 330 H--AVMCLASV-AN-YVISGSADST--SRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTIC-TGS-- 400 (434)
Q Consensus 330 ~--~v~~~~~~-~~-~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~-s~~-- 400 (434)
. .+..+.+. ++ ++++...|+. |++|++.++ ..+..+..+.+.+..+.++|+ +..|+ +.+
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g---~~~~~l~~~~~~v~~~~~s~d---------~~~l~~~~ss~ 401 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG---ALLKIFPLEVGSVVGYSGQKK---------DTEIFYQFTSF 401 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC---CEEEEECCCSSEEEEEECCTT---------CSEEEEEEECS
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC---CEEEecCCCCceEEEEecCCC---------CCEEEEEEeCC
Confidence 2 56677776 44 6677777875 556676555 455666677778888988887 55444 333
Q ss_pred -cCCeEEEEecCCCC
Q 046226 401 -LDGVLKMWRVTRPK 414 (434)
Q Consensus 401 -~Dg~v~iw~~~~~~ 414 (434)
..++|+.||+.+++
T Consensus 402 ~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 402 LSPGIIYHCDLTKEE 416 (710)
T ss_dssp SCCCEEEEEETTSSS
T ss_pred CCCCEEEEEECCCCc
Confidence 45799999998876
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.64 E-value=1.1e-13 Score=125.09 Aligned_cols=264 Identities=12% Similarity=0.038 Sum_probs=170.3
Q ss_pred ceeeeEEEeeccccEEEEEE--cCCEEEEEe----------CCCeEEEecCCCceeEeeccCC------CccEEEEEEeC
Q 046226 81 SYRCISSVLKKDGQILCIAV--GNGFIYTGS----------DSNVIRIWKQPEFTECGRLKAK------TSMVVAMEVSH 142 (434)
Q Consensus 81 ~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~~------~~~v~~l~~~~ 142 (434)
+.+.+.++..+..+ .++| ++++|+++. .++.|.+||..+++.+.++... ......++++|
T Consensus 40 t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp 117 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT 117 (361)
T ss_dssp TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT
T ss_pred CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC
Confidence 34455566556555 7888 899999986 3678999999998888877532 23456789999
Q ss_pred C--EEEEEEc--CCeEEEeecCCCCCcee-eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC-CEEEEEecCC
Q 046226 143 D--RVYAAYG--DGKIRVWRSTWDNGVKH-VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLDK 216 (434)
Q Consensus 143 ~--~l~~~s~--dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg 216 (434)
+ +|+++.. ++.|.+||+.+.+.+.. +. .. ....+.+.|++ ..+++.+.||
T Consensus 118 dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-----------------------~~-~~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 118 DGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-----------------------AA-GCWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp TSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-----------------------GT-TEEEEEECTTSSSEEEEEETTS
T ss_pred CCCEEEEECCCCCCeEEEEECCCCcEEEEEec-----------------------CC-CcceeEEcCCCCeeEEEECCCC
Confidence 7 6777764 68999999987644333 21 11 12224566765 6777888899
Q ss_pred cEEEEEcCC-CeeEE------EcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEec--c----c
Q 046226 217 TIKVWRIRD-SKCIE------TIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT--A----K 282 (434)
Q Consensus 217 ~i~vwd~~~-~~~~~------~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~----~ 282 (434)
.+.+|++.. ++... .+.....++ .+.+.+++ .++..+.++.|.++|+... . ......+. . .
T Consensus 174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~--~--~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 174 GLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGD--E--VKVDGPWSLLNDEDKA 248 (361)
T ss_dssp SEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSS--S--CEEEEEEESCCHHHHH
T ss_pred cEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCC--C--ceecccccccCccccc
Confidence 999999865 55441 122222222 22334556 6666678899999998511 1 11111111 0 0
Q ss_pred ----ccCeEEEEEecCCCEEEEEcC-----------CCeEEEEEcCcccccccccCcccCcccceEEEEe--eCCEEEEe
Q 046226 283 ----YSPVKTLTLTLDDGLLYGGCT-----------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VANYVISG 345 (434)
Q Consensus 283 ----~~~v~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~ 345 (434)
......++++|+++.++++.. .+.|.+||+.+.+... .+..+. +.++++ +|++|+++
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~----~i~~~~--p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVA----RIPGRD--ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEE----EEECTT--CCEEEEETTTTEEEEE
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEE----EEecCC--eeEEEECCCCCEEEEe
Confidence 011223789999888887643 3589999987554332 333443 566666 57788888
Q ss_pred cCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeec
Q 046226 346 SADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383 (434)
Q Consensus 346 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 383 (434)
+. +.|.+||..++ ..+.+..+..+......++++|+
T Consensus 323 n~-~~v~v~D~~t~-~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 323 DG-GNVNVYDISQP-EPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp CS-SCEEEEECSSS-SCEEEEEETTSCSSEEEEEECCC
T ss_pred CC-CeEEEEECCCC-cceeeEEeccCCCCcEEEEecCC
Confidence 86 99999999875 22456666566777788999998
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=1.9e-13 Score=118.26 Aligned_cols=213 Identities=11% Similarity=0.009 Sum_probs=148.9
Q ss_pred eCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcC-CCeEEEEEecCCCEEEEEecCCcE
Q 046226 141 SHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHM-GPITSIAINVSDDTLYSASLDKTI 218 (434)
Q Consensus 141 ~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i 218 (434)
+|+ .|++++.|+.|.+||.++++.+..+.. +. ..+.++.+.|+|++|+ +.++.|
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~----------------------~~~~~~~~~~~~pdG~ilv--s~~~~V 58 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPL----------------------EKGWECNSVAATKAGEILF--SYSKGA 58 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEEC----------------------CTTCCCCEEEECTTSCEEE--ECBSEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCC----------------------CccCCCcCeEECCCCCEEE--eCCCCE
Confidence 455 677778899999999888877666542 22 4678899999999888 347789
Q ss_pred EEEEcCCCeeEEEcccCc-cCeEEEEEcCCC-eEEEEeC-CCeEEEEecccccCcceeEEEEEe--cccccCeEEEEEec
Q 046226 219 KVWRIRDSKCIETIQAHS-EPINALVVADDG-VLYSASD-DATVRVWRRYFYSENQLHTLILTL--TAKYSPVKTLTLTL 293 (434)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ 293 (434)
..||. +++.+..+..+. ..+.++.+.+++ .+++.+. ++.|..+|.. +.......... ..+......+++.+
T Consensus 59 ~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~---Gk~l~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 59 KMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK---GEVLSKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp EEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT---SCEEEEEEECCSCSSGGGSCSCCEECT
T ss_pred EEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC---CCEEEEEeccCCCCcccccccCceECC
Confidence 99999 899999988753 478889999999 7776666 7777777753 22222222111 12223455677889
Q ss_pred CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEE--EeeCCEEEEecCCCcEEEEeccCCCceeeEEEeecc
Q 046226 294 DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL--ASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 294 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h 371 (434)
+|+++++...++.|..||.. .+...++... . .+.+. ..+++.++++..++.|..+|..++ +.+..+..+
T Consensus 135 ~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~--~---~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG---~~~w~~~~~ 205 (276)
T 3no2_A 135 KGNYLVPLFATSEVREIAPN-GQLLNSVKLS--G---TPFSSAFLDNGDCLVACGDAHCFVQLNLESN---RIVRRVNAN 205 (276)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEEECS--S---CCCEEEECTTSCEEEECBTTSEEEEECTTTC---CEEEEEEGG
T ss_pred CCCEEEEecCCCEEEEECCC-CCEEEEEECC--C---CccceeEcCCCCEEEEeCCCCeEEEEeCcCC---cEEEEecCC
Confidence 99999999999999999986 4444443221 1 12223 335789999988889999999987 566666543
Q ss_pred c------cceeEEEEeecccCCCCCCcccEEEEe
Q 046226 372 R------GPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 372 ~------~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
. ..+..+...++ |.++++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~---------G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQN---------GGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTT---------SCEEEEE
T ss_pred CCCCccccccccceEcCC---------CCEEEEe
Confidence 2 12566777776 6666665
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=4.3e-14 Score=139.35 Aligned_cols=274 Identities=13% Similarity=0.041 Sum_probs=165.7
Q ss_pred EcCCEEEEEeCCC-----eEEEecCCCceeEeec------cCCCccEEEEEEeCC--EEEEE-----EcCCeEEEeecCC
Q 046226 100 VGNGFIYTGSDSN-----VIRIWKQPEFTECGRL------KAKTSMVVAMEVSHD--RVYAA-----YGDGKIRVWRSTW 161 (434)
Q Consensus 100 ~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~------~~~~~~v~~l~~~~~--~l~~~-----s~dg~i~vwd~~~ 161 (434)
.+|++++....++ .|.+.+...++....+ .+|...+..++|+|| .|+.+ +.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 4677666555433 2344444343322222 245557899999998 55532 2246899999987
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCc-------------EEEEEcCCCe-
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKT-------------IKVWRIRDSK- 227 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-------------i~vwd~~~~~- 227 (434)
++......+ .......++|+|||+.|+.++.|.. |++|++.+++
T Consensus 157 g~~~~~~~~----------------------~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 157 GEWSKVDVI----------------------EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp CCBCSSCCB----------------------SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred CCCcCCccc----------------------CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 754311000 1111267899999999999988776 9999998875
Q ss_pred ---eEEEcccCccCeEEEEEcCCC-eEEEEeCCC----eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEE
Q 046226 228 ---CIETIQAHSEPINALVVADDG-VLYSASDDA----TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLY 299 (434)
Q Consensus 228 ---~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 299 (434)
.+.....+...+..+.|+||| +|+.++.++ .|.+||.. ...... +..+...+....+ ++|.+++
T Consensus 215 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~---~~~~~~----l~~~~~~~~~~~~-~~g~l~~ 286 (695)
T 2bkl_A 215 KDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG---EKDFRL----LVKGVGAKYEVHA-WKDRFYV 286 (695)
T ss_dssp GCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT---CSSCEE----EEECSSCCEEEEE-ETTEEEE
T ss_pred hceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC---CCceEE----eecCCCceEEEEe-cCCcEEE
Confidence 343444455678899999999 666665554 56666542 111111 2223344455555 5566444
Q ss_pred EEc---CCCeEEEEEcCcccccccccCcccCc-ccceEEEEeeCC-EEEEecCCCcEEEEeccCCCceeeEEEeecc-cc
Q 046226 300 GGC---TDGYIHYWHKGWFSAQLQYGGALQGH-THAVMCLASVAN-YVISGSADSTSRVWAREQDGRHTMLAVLVGH-RG 373 (434)
Q Consensus 300 ~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-~~ 373 (434)
.+. .++.|.+||+...... .....+..+ ...+..+++.++ ++++...|+..+||.+...+ .....+..+ .+
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g--~~~~~l~~~~~~ 363 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARA-SWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG--KPVRTVQLPGVG 363 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGG-GCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC--CEEEECCCSSSS
T ss_pred EECCCCCCCEEEEEeCCCCCcc-CCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC--CeeEEecCCCCe
Confidence 443 2589999998654321 011112222 345677777654 67778889988888766321 344455544 56
Q ss_pred ceeEEEEeecccCCCCCCcccEEE----EeecCCeEEEEecCCCCc
Q 046226 374 PIRCAIAFLGRFGEETEDEYCTIC----TGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 374 ~v~~~~~~~~~~~~~~~~~~~~l~----s~~~Dg~v~iw~~~~~~~ 415 (434)
.+..+.++|+ +..|+ +....++|++||+.+++.
T Consensus 364 ~v~~~~~s~d---------~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 364 AASNLMGLED---------LDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EECCCBSCTT---------CSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEeecCCC---------CCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 6777888877 65555 334468899999987753
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.63 E-value=3.1e-13 Score=118.74 Aligned_cols=242 Identities=10% Similarity=-0.016 Sum_probs=157.0
Q ss_pred eeEeeccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEE
Q 046226 123 TECGRLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITS 199 (434)
Q Consensus 123 ~~~~~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 199 (434)
..+..+..+.....+++|+++ .++++..++.|..||...+ ...+. .+...+.+
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~----------------------~~~~~~~~ 73 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM----------------------HPSHHQNG 73 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE----------------------SSCSSEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE----------------------CCCCCcce
Confidence 334445556667889999986 3666677899999998754 22221 35567899
Q ss_pred EEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccC----ccCeEEEEEcCCC-eEEE----Ee-------------CCC
Q 046226 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH----SEPINALVVADDG-VLYS----AS-------------DDA 257 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~-~l~s----~~-------------~dg 257 (434)
++++++++++++...++.|.+||..+++........ ...+..+++.++| ++++ ++ ..+
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 999999998877776789999999887754333221 2356789999999 5554 32 123
Q ss_pred eEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEe
Q 046226 258 TVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS 337 (434)
Q Consensus 258 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 337 (434)
.|..+|.. ... .....+......++|+|+++.+++.+.++.|.+||+............+..+...+.++++
T Consensus 154 ~l~~~~~~----g~~----~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~ 225 (296)
T 3e5z_A 154 WVFRLAPD----GTL----SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV 225 (296)
T ss_dssp EEEEECTT----SCE----EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE
T ss_pred EEEEECCC----CCE----EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE
Confidence 55555432 111 1223445567899999999998778888999999986211110000011123334455666
Q ss_pred e--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEe-ecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 338 V--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-LGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 338 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
+ |+++++. ++.|.+||.. + +.+..+..+.. +.+++|. |+ ++.|+.++.++ +.-++..+.
T Consensus 226 d~~G~l~v~~--~~~v~~~~~~-g---~~~~~~~~~~~-~~~~~f~~~d---------~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 226 DAGGLIWASA--GDGVHVLTPD-G---DELGRVLTPQT-TSNLCFGGPE---------GRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp BTTSCEEEEE--TTEEEEECTT-S---CEEEEEECSSC-CCEEEEESTT---------SCEEEEEETTE-EEEEECSCC
T ss_pred CCCCCEEEEc--CCeEEEECCC-C---CEEEEEECCCC-ceeEEEECCC---------CCEEEEEcCCe-EEEEEcccc
Confidence 5 6655554 7899999986 4 56666777777 8999995 66 77788887763 334444433
No 186
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=3.3e-12 Score=115.42 Aligned_cols=279 Identities=6% Similarity=-0.064 Sum_probs=175.2
Q ss_pred cCCEEEEEeC--CC---eEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE----------cCCeEEEeecCCCC
Q 046226 101 GNGFIYTGSD--SN---VIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY----------GDGKIRVWRSTWDN 163 (434)
Q Consensus 101 ~~~~l~tg~~--dg---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s----------~dg~i~vwd~~~~~ 163 (434)
+++++++... .+ .|.+||..+++.+.++.....+ .++++|+ .++++. .++.|.+||..+.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 4455555442 22 8899999999998888765554 8999998 666665 36789999998766
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEE-cccCccCeE
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIET-IQAHSEPIN 240 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~ 240 (434)
.+..+.+.... .. .+......++|+|||++|+++.. ++.|.++| .+++.+.. +....
T Consensus 109 ~~~~i~~~~~~--------------~~-~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---- 168 (373)
T 2mad_H 109 PIADIELPDAP--------------RF-DVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---- 168 (373)
T ss_pred EEEEEECCCcc--------------cc-ccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----
Confidence 55555321000 00 01123458899999999998874 47899999 99998877 65322
Q ss_pred EEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEE--EEecccccC-eEEEEEecCCCEEEEEcCCCeEEEEEcCcc
Q 046226 241 ALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLI--LTLTAKYSP-VKTLTLTLDDGLLYGGCTDGYIHYWHKGWF 315 (434)
Q Consensus 241 ~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 315 (434)
++.+.+++ .+++.+.||.+.++|. .... ..... ... ....+ .....+.+++..++..+.++.+.+.|+...
T Consensus 169 ~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~--~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 169 CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA--AGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE--EEEEeccccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 24455555 6677788999999987 2211 11110 001 11122 123456666665555557889999998543
Q ss_pred cccccccCcc----------cCcccceEEEEeeCCEEEEecC----------CCcEEEEeccCCCceeeEEEeeccccce
Q 046226 316 SAQLQYGGAL----------QGHTHAVMCLASVANYVISGSA----------DSTSRVWAREQDGRHTMLAVLVGHRGPI 375 (434)
Q Consensus 316 ~~~~~~~~~~----------~~~~~~v~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v 375 (434)
.........+ .........+..+++.+++... ++.|.++|+.+. +.+..+.. ....
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---~vv~~i~~-g~~p 320 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---QTSSQISL-GHDV 320 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---EEEEEEEC-CCCc
Confidence 2111000000 0011112334445666655432 357999999887 56666643 3357
Q ss_pred eEEEEeecccCCCCCCccc-EEEEee-cCCeEEEEecCCCCcccc
Q 046226 376 RCAIAFLGRFGEETEDEYC-TICTGS-LDGVLKMWRVTRPKSSCG 418 (434)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~-~l~s~~-~Dg~v~iw~~~~~~~~~~ 418 (434)
.+++|+|+ |+ +++++. .++.|.+||+.+++....
T Consensus 321 ~~i~~s~D---------g~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 321 DAISVAQD---------GGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEECCC---------CCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 88999999 77 777776 589999999999887654
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=3e-13 Score=117.01 Aligned_cols=236 Identities=5% Similarity=-0.059 Sum_probs=157.0
Q ss_pred cEEEEEEeCC-EEEE-E-EcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEE
Q 046226 134 MVVAMEVSHD-RVYA-A-YGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY 210 (434)
Q Consensus 134 ~v~~l~~~~~-~l~~-~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 210 (434)
...+++++++ .+++ + ..++.|.+||........ .. ..+...+.++++.+++++++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~---------------------~~~~~~p~~i~~~~~g~l~v 82 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LP---------------------FNGLYQPQGLAVDGAGTVYV 82 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CC---------------------CCSCCSCCCEEECTTCCEEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Ee---------------------eCCcCCcceeEECCCCCEEE
Confidence 6788999886 5555 5 567899999865332111 00 02334678899999988665
Q ss_pred EEecCCcEEEEEcCCCeeEEEcc-cCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEE
Q 046226 211 SASLDKTIKVWRIRDSKCIETIQ-AHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKT 288 (434)
Q Consensus 211 s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 288 (434)
+.. ++.|.+||....... .+. .....+.++++.+++ ++++...++.|.+|+... . . ...........+..
T Consensus 83 ~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~--~--~--~~~~~~~~~~~p~~ 154 (270)
T 1rwi_B 83 TDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS--K--T--QTVLPFTGLNDPDG 154 (270)
T ss_dssp EET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC--C--S--CEECCCCSCCSCCC
T ss_pred EcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC--c--e--eEeeccccCCCcee
Confidence 555 889999998765433 332 233578899999998 666666788999997541 1 1 11111222346788
Q ss_pred EEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 289 LTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 289 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
++++++++++++...++.|.+||......... ...+...+.+++++ |.++++...++.|.+|+..... ...
T Consensus 155 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~----~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~---~~~ 227 (270)
T 1rwi_B 155 VAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL----PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT---STV 227 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTCCEEEC----CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC---CEE
T ss_pred EEEeCCCCEEEEECCCCEEEEEecCCCceEee----cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc---cee
Confidence 99999999777777789999999764332211 11222456777776 5566666678899999987642 222
Q ss_pred EeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 367 VLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 367 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
....+...+.++++.++ |.++++...++.|+++++...+.
T Consensus 228 ~~~~~~~~p~~i~~~~~---------g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSD---------RTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCCCSCSCEEEEEECTT---------CCEEEEEGGGTEEEEECCCGGGS
T ss_pred eccCCCCCceeEEECCC---------CCEEEEECCCCEEEEEcCCCccc
Confidence 22233356889999988 88889999999999999886653
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.61 E-value=7.9e-13 Score=117.82 Aligned_cols=241 Identities=10% Similarity=0.027 Sum_probs=159.8
Q ss_pred cEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEE-cCCeEEEeecCCCCCceeeEe
Q 046226 94 QILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAY-GDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 94 ~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s-~dg~i~vwd~~~~~~~~~~~~ 170 (434)
....+++ ++.++++...++.|.+||..+++.+.++.. ......++++++ .++++. .++.|.+||..+.+....+..
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence 4567777 455555566679999999999999888853 456889999665 777776 789999999987655444432
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe--cCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS--LDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (434)
... .+.......+++ ++..++++. .++.|.++|+.+++.+..+... .....+.+++++
T Consensus 124 g~~-----------------~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG 183 (328)
T 3dsm_A 124 PDM-----------------DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYN 183 (328)
T ss_dssp TTC-----------------CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTS
T ss_pred CCc-----------------cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCC
Confidence 100 011124456666 355555554 4889999999999988877643 345688999999
Q ss_pred -eEEEEeCC----------CeEEEEecccccCcceeEEEEEeccc-ccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccc
Q 046226 249 -VLYSASDD----------ATVRVWRRYFYSENQLHTLILTLTAK-YSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 249 -~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
+++++..+ +.|.++|... .+....+... ......++++|++++|+++.. .|.+||..+..
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t------~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAET------FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTT------TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSS
T ss_pred CEEEEECCCccCCccccCCceEEEEECCC------CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCc
Confidence 44444443 7899999761 1222222211 236889999999999988765 89999986544
Q ss_pred ccccccCcccCcccceEEEEee---CCEEEEe----cCCCcEEEEeccCCCceeeEEEee
Q 046226 317 AQLQYGGALQGHTHAVMCLASV---ANYVISG----SADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 317 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
.... ...........+++++ +.++++. ..++.|.+||.. + +.+..+.
T Consensus 256 ~~~~--~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g---~~~~~i~ 309 (328)
T 3dsm_A 256 VPVR--PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G---KLIDEFY 309 (328)
T ss_dssp CCSS--CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C---CEEEEEE
T ss_pred eeee--eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C---CEEEEEE
Confidence 3211 1111123456777775 3455665 578999999998 5 4555543
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=6.4e-13 Score=114.96 Aligned_cols=234 Identities=6% Similarity=-0.021 Sum_probs=155.6
Q ss_pred cEEEEEE--cCCEEE-EEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 94 QILCIAV--GNGFIY-TGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 94 ~v~~~~~--~~~~l~-tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
...++++ ++++++ +...++.|.+||..+.........+...+.+++++++ .++++..++.|.+||....... .+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eee
Confidence 5677888 677666 4467899999997665433322233356788999886 5666666889999997643221 110
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG- 248 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~- 248 (434)
......+..+++.++++++++...++.|.+|+..+.............+.++++.+++
T Consensus 104 ---------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 104 ---------------------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp ---------------------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred ---------------------cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 0133568899999999877777778899999876554433333333467899999988
Q ss_pred eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCc
Q 046226 249 VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGH 328 (434)
Q Consensus 249 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 328 (434)
++++...++.|.+||... . ............+..++++++|.++++...++.|.+||........ ....+
T Consensus 163 l~v~~~~~~~i~~~~~~~---~---~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~----~~~~~ 232 (270)
T 1rwi_B 163 VYVTDTDNNRVVKLEAES---N---NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV----LPFTG 232 (270)
T ss_dssp EEEEEGGGTEEEEECTTT---C---CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE----CCCCS
T ss_pred EEEEECCCCEEEEEecCC---C---ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee----eccCC
Confidence 566666678999999761 1 1111122233568899999999877777778999999975432211 11122
Q ss_pred ccceEEEEee--CCEEEEecCCCcEEEEeccCC
Q 046226 329 THAVMCLASV--ANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 329 ~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 359 (434)
...+.+++++ |+++++...++.|++|++...
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 3456777775 678888888999999998765
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=1.2e-12 Score=115.02 Aligned_cols=240 Identities=8% Similarity=-0.040 Sum_probs=156.6
Q ss_pred EEEeeccccEEEEEE--cCC-EEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEc-CCeEEEeecC
Q 046226 86 SSVLKKDGQILCIAV--GNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYG-DGKIRVWRST 160 (434)
Q Consensus 86 ~~~~~h~~~v~~~~~--~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~ 160 (434)
..+..+.....+++| +++ +++++..++.|..||..++ ...+..+...+.+++++++ .++++.. ++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 334456667788999 676 8888999999999999877 5556667788999999987 4555554 6899999986
Q ss_pred CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE----Eec-------------CCcEEEEEc
Q 046226 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS----ASL-------------DKTIKVWRI 223 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~vwd~ 223 (434)
+++........ . ......+.+++++|+|+++++ |+. .+.|..++.
T Consensus 99 ~g~~~~~~~~~--~----------------~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 160 (296)
T 3e5z_A 99 GGEWESIADSF--E----------------GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP 160 (296)
T ss_dssp TCCEEEEECEE--T----------------TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT
T ss_pred CCcEEEEeecc--C----------------CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECC
Confidence 55432211000 0 012235678999999998887 331 345666665
Q ss_pred CCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc
Q 046226 224 RDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 302 (434)
. ++ +..+..+......++|+|++ .+++.+.++.|.+||+.. ..........+..+...+..++++++|++.++.
T Consensus 161 ~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 161 D-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA--RGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp T-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS--SSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred C-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC--CCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 4 44 34444566678899999999 667777889999999861 111101111113344567789999999866665
Q ss_pred CCCeEEEEEcCcccccccccCcccCcccceEEEEee---CCEEEEecCCCcEEEEeccC
Q 046226 303 TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV---ANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 303 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~i~iwd~~~ 358 (434)
++.|.+||.... ....+..+.. +.+++|. ++.|++++.++ +.-++..+
T Consensus 236 -~~~v~~~~~~g~-----~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 236 -GDGVHVLTPDGD-----ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp -TTEEEEECTTSC-----EEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred -CCeEEEECCCCC-----EEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 889999997421 1122334444 6777773 45777777653 44445544
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=1.5e-12 Score=112.63 Aligned_cols=237 Identities=8% Similarity=-0.004 Sum_probs=162.3
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCC-ccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCC
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKT-SMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGG 178 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 178 (434)
.+++|++++.|+.|.+||.++++.+.++..+. ..+.++.+.|+ .++. +.++.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~-------- 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAA-------- 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEEC--------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcC--------
Confidence 36789999999999999999999999998776 47889999998 4444 66888999998 5666555532
Q ss_pred ceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec-CCcEEEEEcCCCeeEEEccc------CccCeEEEEEcCCC-eE
Q 046226 179 AVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL-DKTIKVWRIRDSKCIETIQA------HSEPINALVVADDG-VL 250 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~------~~~~v~~~~~~~~~-~l 250 (434)
+....+.++.+.++|+++++.+. ++.|..+|. +++.+..+.. +......+.+.+++ ++
T Consensus 74 -------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 74 -------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYL 139 (276)
T ss_dssp -------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE
T ss_pred -------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEE
Confidence 12345788899999999999887 778888886 6777776642 22345566788888 88
Q ss_pred EEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccC-cccC-c
Q 046226 251 YSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGG-ALQG-H 328 (434)
Q Consensus 251 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~-~ 328 (434)
++...++.|..||.. +.. +..+... ..+.++...++++.++++..++.|..+|..+.+...++.. .+.+ .
T Consensus 140 v~~~~~~~v~~~d~~---G~~----~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 140 VPLFATSEVREIAPN---GQL----LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp EEETTTTEEEEECTT---SCE----EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred EEecCCCEEEEECCC---CCE----EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 888899999999965 222 2222222 3456678889999999999889999999876655554431 1111 1
Q ss_pred ccceEEEEe--eCCEEEEecCC--------CcEEEEeccCCCceeeEEEeecc
Q 046226 329 THAVMCLAS--VANYVISGSAD--------STSRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 329 ~~~v~~~~~--~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~h 371 (434)
...+..+.. +|+.+++.... +..+++.+...+ +.+-++..+
T Consensus 212 l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g--~~~W~~~~~ 262 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG--KVVWQLNDK 262 (276)
T ss_dssp CSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS--BEEEEECCT
T ss_pred ccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC--CEEEEecCc
Confidence 122444444 46666665311 234566664322 455555443
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.59 E-value=3.2e-14 Score=130.49 Aligned_cols=251 Identities=7% Similarity=-0.094 Sum_probs=155.0
Q ss_pred EecCCCceeEeeccCCCcc-----EEEEEEeCC--EEEEEEc---CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEe
Q 046226 116 IWKQPEFTECGRLKAKTSM-----VVAMEVSHD--RVYAAYG---DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIV 185 (434)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~-----v~~l~~~~~--~l~~~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
.+|..++..+..+..+... +..++|+|+ .|+.+.. +..|.+||+..++.....
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~----------------- 76 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT----------------- 76 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-----------------
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-----------------
Confidence 4477788777777665443 677889997 5555544 246888887654321111
Q ss_pred ccccccCcCCC-eEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEE-------------------EEEc
Q 046226 186 GKDKMMKHMGP-ITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINA-------------------LVVA 245 (434)
Q Consensus 186 ~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~-------------------~~~~ 245 (434)
.+... ...+.|+|++++|+.++.++.|++||+.+++.......+...... +.++
T Consensus 77 ------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s 150 (396)
T 3c5m_A 77 ------EGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQ 150 (396)
T ss_dssp ------CSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred ------cCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccC
Confidence 12222 333789999999999998999999999988765555544432222 2446
Q ss_pred CCC-eEEEE-----eCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEcCC------CeEEEEEc
Q 046226 246 DDG-VLYSA-----SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTD------GYIHYWHK 312 (434)
Q Consensus 246 ~~~-~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~ 312 (434)
|++ .++.. ..+..|.+||+.. ..... +..+...+..+.|+| +++.|+..+.+ ..|.+||+
T Consensus 151 pdg~~~~~~~~~~~~~~~~l~~~d~~~---g~~~~----~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~ 223 (396)
T 3c5m_A 151 PLTSWEKFAEFYHTNPTCRLIKVDIET---GELEV----IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNE 223 (396)
T ss_dssp CCCSHHHHHHHHHTCCCEEEEEEETTT---CCEEE----EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEET
T ss_pred CCCcceeeeeeccCCCcceEEEEECCC---CcEEe----eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEEC
Confidence 666 33322 4567899999862 11111 113456788999999 78877666543 36888887
Q ss_pred CcccccccccCcccCc-ccceEEEEee--CCEEEEecCC-----CcEEEEeccCCCceeeEEEeeccccceeEEEEee-c
Q 046226 313 GWFSAQLQYGGALQGH-THAVMCLASV--ANYVISGSAD-----STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL-G 383 (434)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 383 (434)
...... .+ .... ...+..+.|+ |++|+.++.+ +.|++||+.++.. ..+..+.+ .. +.|+| +
T Consensus 224 ~~~~~~-~l---~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~----~~-~~~s~~d 293 (396)
T 3c5m_A 224 DGSNVR-KI---KEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMVMPP----CS-HLMSNFD 293 (396)
T ss_dssp TSCCCE-ES---SCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEECCS----EE-EEEECSS
T ss_pred CCCcee-Ee---eccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeeeCCC----CC-CCccCCC
Confidence 533211 11 1111 2346666665 6666665433 4599999987632 23333322 22 78888 7
Q ss_pred ccCCCCCCcccEEEEee----------------cCCeEEEEecCCCCc
Q 046226 384 RFGEETEDEYCTICTGS----------------LDGVLKMWRVTRPKS 415 (434)
Q Consensus 384 ~~~~~~~~~~~~l~s~~----------------~Dg~v~iw~~~~~~~ 415 (434)
|++++.++ .++.|++||+.+++.
T Consensus 294 ---------g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 294 ---------GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp ---------SSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred ---------CceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 78887754 347899999987653
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.57 E-value=2.8e-12 Score=114.41 Aligned_cols=281 Identities=9% Similarity=-0.047 Sum_probs=177.4
Q ss_pred cCCEEEEEeC-----CCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE----------cCCeEEEeecCCCC
Q 046226 101 GNGFIYTGSD-----SNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY----------GDGKIRVWRSTWDN 163 (434)
Q Consensus 101 ~~~~l~tg~~-----dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s----------~dg~i~vwd~~~~~ 163 (434)
+++.+++... ++.|.+.|..+++.+.++.....+ . ++++|+ .++++. .++.|.+||..+.+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 5566666654 679999999999999998866665 4 999998 566654 36789999998887
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEEcccCccCeEE
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIETIQAHSEPINA 241 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~ 241 (434)
.+..+.+..-. . .........++|+|||++++++.. ++.|.++|+.+++.+.++.... |
T Consensus 121 v~~~I~v~~g~----r-----------~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~ 181 (386)
T 3sjl_D 121 PTADIELPDAP----R-----------FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----C 181 (386)
T ss_dssp EEEEEEETTCC----C-----------CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----E
T ss_pred EEEEEECCCcc----c-----------cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----c
Confidence 76666431100 0 001224567899999999998864 6899999999999998886432 1
Q ss_pred EEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeE-EEEEe-cCCCEEEEEcCCCeEEEEEcCcccc
Q 046226 242 LVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVK-TLTLT-LDDGLLYGGCTDGYIHYWHKGWFSA 317 (434)
Q Consensus 242 ~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~ 317 (434)
..+.|.+ .+++.+.||.+.+.++...... .......+.....++. ...|. ++|++++ .+.+|.|++.|+.....
T Consensus 182 ~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 182 YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA 259 (386)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC
T ss_pred ceeecCCCceeEEECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc
Confidence 2223433 6778888999999987621111 1100001111112221 23554 5665555 55589999999864432
Q ss_pred cccccCc----------ccCcccceEEEEeeCCEEEEecC----------CCcEEEEeccCCCceeeEEEeeccccceeE
Q 046226 318 QLQYGGA----------LQGHTHAVMCLASVANYVISGSA----------DSTSRVWAREQDGRHTMLAVLVGHRGPIRC 377 (434)
Q Consensus 318 ~~~~~~~----------~~~~~~~v~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 377 (434)
....... .........++..+++.++.... .+.|.++|+.+. +.+..+.. ...+..
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~---kv~~~i~v-g~~~~~ 335 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG---ERLAKFEM-GHEIDS 335 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC---CEEEEEEE-EEEECE
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC---eEEEEEEC-CCCcce
Confidence 1110000 00111123445555665555432 257999999987 45555443 236789
Q ss_pred EEEeecccCCCCCCccc-EEEE-eecCCeEEEEecCCCCccc
Q 046226 378 AIAFLGRFGEETEDEYC-TICT-GSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 378 ~~~~~~~~~~~~~~~~~-~l~s-~~~Dg~v~iw~~~~~~~~~ 417 (434)
++++++ ++ +|++ ...++.|.++|..+++.+.
T Consensus 336 lavs~D---------~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 336 INVSQD---------EKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEECSS---------SSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEECCC---------CCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 999999 65 5555 4569999999999988654
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=1e-10 Score=102.55 Aligned_cols=273 Identities=9% Similarity=0.008 Sum_probs=178.6
Q ss_pred ccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEe-eccCCCccEEEEEEeCC-EEEEEEc-CCeEEEeecCCCCCc
Q 046226 91 KDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECG-RLKAKTSMVVAMEVSHD-RVYAAYG-DGKIRVWRSTWDNGV 165 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~~~~~~ 165 (434)
....+.++++ +|++.++...++.|.+||.. ++... .+..+...+.++++.++ .++.+.. ++.|..||.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~- 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF- 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-
Confidence 4567889998 67777776678999999987 44332 23334467899999886 5555554 7889999876 322
Q ss_pred eeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEE-EcccCccCeEEEEE
Q 046226 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIE-TIQAHSEPINALVV 244 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~ 244 (434)
..+.. ......+.++++.++++++++...++.|..+|.. ++... .+......+.++++
T Consensus 95 ~~~~~--------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 153 (300)
T 2qc5_A 95 TEYPL--------------------PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITL 153 (300)
T ss_dssp EEEEC--------------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred EEecC--------------------CCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEE
Confidence 22211 0133568899999999888777768899999987 55442 23334567899999
Q ss_pred cCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccC
Q 046226 245 ADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGG 323 (434)
Q Consensus 245 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 323 (434)
.+++ ++++...++.|..+|.. .. .. ..........+..+++++++++.++....+.|.+||... ... ..
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~~---g~-~~--~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~~-~~-- 223 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITNT---GK-LE--EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EIS-EY-- 223 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECTT---CC-EE--EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CEE-EE--
T ss_pred CCCCCEEEEecCCCeEEEECCC---Cc-EE--EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-cEE-EE--
Confidence 9988 55555557889999863 11 11 122233445688999999998777777778899999731 111 11
Q ss_pred cccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 324 ALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 324 ~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
....+...+.++.++ |++.++...++.|..||.. + . .....+......+.++++.++ |.+.++..
T Consensus 224 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-~-~~~~~~~~~~~~~~~i~~~~~---------g~l~v~~~- 290 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-T-IQEYQLQTENAEPHGITFGKD---------GSVWFALK- 290 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-C-EEEEECCSTTCCCCCEEECTT---------SCEEEECS-
T ss_pred ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-c-EEEEECCccCCccceeEeCCC---------CCEEEEcc-
Confidence 122334456777775 5566666667899999983 3 1 122223334556788888887 77666655
Q ss_pred CCeEEEEecC
Q 046226 402 DGVLKMWRVT 411 (434)
Q Consensus 402 Dg~v~iw~~~ 411 (434)
. .|..++.+
T Consensus 291 ~-~i~~~~p~ 299 (300)
T 2qc5_A 291 C-KIGKLNLN 299 (300)
T ss_dssp S-EEEEEEEC
T ss_pred C-ceEEeCCC
Confidence 4 66666643
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=1.3e-12 Score=129.61 Aligned_cols=273 Identities=12% Similarity=0.003 Sum_probs=163.4
Q ss_pred EcCCEEEEEeCCCe---EEEec--CC---CceeEee------ccCCCccEEEEEEeCC--EEEEEEcC-----CeEEEee
Q 046226 100 VGNGFIYTGSDSNV---IRIWK--QP---EFTECGR------LKAKTSMVVAMEVSHD--RVYAAYGD-----GKIRVWR 158 (434)
Q Consensus 100 ~~~~~l~tg~~dg~---i~iwd--~~---~~~~~~~------~~~~~~~v~~l~~~~~--~l~~~s~d-----g~i~vwd 158 (434)
.+|++++....++. -.+|. .. .++.... -.+|...+..++|+|| .|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 47777766554432 44453 33 3322221 1223346889999998 56655443 3699999
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCc--------------EEEEEcC
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKT--------------IKVWRIR 224 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--------------i~vwd~~ 224 (434)
+.+++..... .+...+..++|+|| +.|+.+..++. |++|++.
T Consensus 196 l~tg~~~~~~-----------------------~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lg 251 (741)
T 1yr2_A 196 VADGKPLADE-----------------------LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLG 251 (741)
T ss_dssp TTTCCEEEEE-----------------------EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETT
T ss_pred CCCCCCCCcc-----------------------CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECC
Confidence 9877653221 01112357899999 98888876654 8999997
Q ss_pred CCe----eEEEcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEEecccccCcceeEEEEEecccccCeEEEEEecC
Q 046226 225 DSK----CIETIQAHSEPINALVVADDG-VLYSASDD-----ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD 294 (434)
Q Consensus 225 ~~~----~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 294 (434)
+++ .+.....+...+..+.|+||| +|+..+.+ ..|.+||+... ... ....+..+....... ++++
T Consensus 252 t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~--~~~--~~~~l~~~~~~~~~~-~~~d 326 (741)
T 1yr2_A 252 TPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG--KIG--PVTALIPDLKAQWDF-VDGV 326 (741)
T ss_dssp SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT--EEC--CCEEEECSSSSCEEE-EEEE
T ss_pred CCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC--CCc--ccEEecCCCCceEEE-Eecc
Confidence 765 232223333468899999999 66666543 38999998621 001 011222333334444 3488
Q ss_pred CCEEEEEcC----CCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-EEEEecCCCcEEEEeccCCCceeeEEEee
Q 046226 295 DGLLYGGCT----DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-YVISGSADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 295 ~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
|+.|+..+. ++.|.+||+.... ......+..+...+..+++.++ ++++...|+..+||.+...+ .....+.
T Consensus 327 g~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g--~~~~~l~ 402 (741)
T 1yr2_A 327 GDQLWFVSGDGAPLKKIVRVDLSGST--PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDG--KPAGAVS 402 (741)
T ss_dssp TTEEEEEECTTCTTCEEEEEECSSSS--CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTS--CEEEECB
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCc--cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC--Cceeecc
Confidence 888887765 4569999986532 1111122344445666777655 67777889988887665211 3444454
Q ss_pred c-cccceeEEEEeecccCCCCCCcccEEE----EeecCCeEEEEecCCCC
Q 046226 370 G-HRGPIRCAIAFLGRFGEETEDEYCTIC----TGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 370 ~-h~~~v~~~~~~~~~~~~~~~~~~~~l~----s~~~Dg~v~iw~~~~~~ 414 (434)
. +.+.+..+.++|+ +..|+ +....++|++||+.+++
T Consensus 403 ~~~~~~v~~~~~s~d---------~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 403 LPGIGSASGLSGRPG---------DRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CSSSCEEEEEECCBT---------CSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCeEEEEeecCCC---------CCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3 3667888889887 55444 33356899999998765
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=2e-12 Score=116.25 Aligned_cols=185 Identities=10% Similarity=0.036 Sum_probs=123.1
Q ss_pred CeEEEEEecCCCEEEEEecC---C--cEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeC--------------
Q 046226 196 PITSIAINVSDDTLYSASLD---K--TIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASD-------------- 255 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~d---g--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~-------------- 255 (434)
.+..++|+|||++|+.++.+ + .|.+||+.+++.......+ . +..+.|+|++ .|+.++.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 47789999999999887654 2 4888899888766555433 3 9999999999 6666653
Q ss_pred -------------CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC-------eEEEEEcCcc
Q 046226 256 -------------DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG-------YIHYWHKGWF 315 (434)
Q Consensus 256 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~ 315 (434)
...|.+||+.. ......+ .. . .+..+.|+|+| +++++..++ ...||.+...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~---~~~~~~l---~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTES---EEVIEEF---EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp CCC---------CEEEEEEEETTT---TEEEEEE---EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred ceeecCcccccCccceEEEEECCC---CeEEeee---cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 25688888761 1110111 12 2 67889999999 777775542 3455544311
Q ss_pred cccccccCcccCcccceEEEEeeCCEEEEecCC--------CcEEEEeccCCCceeeEEEeeccccceeE-EEEeecccC
Q 046226 316 SAQLQYGGALQGHTHAVMCLASVANYVISGSAD--------STSRVWAREQDGRHTMLAVLVGHRGPIRC-AIAFLGRFG 386 (434)
Q Consensus 316 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~ 386 (434)
... .+..+ ..+..++.+|++|+.++.+ ..|.+|| ++ ........|...+.. +.|+ +
T Consensus 209 --~~~---~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---~~~~l~~~~~~~~~~~~~~s-d--- 273 (347)
T 2gop_A 209 --KEE---KMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---EVMGILDEVDRGVGQAKIKD-G--- 273 (347)
T ss_dssp --EEE---EEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---CEEESSTTCCSEEEEEEEET-T---
T ss_pred --ceE---EeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CC---ceEeccccCCcccCCccEEc-C---
Confidence 111 11123 4455567788877776644 3677787 43 333344566777886 8888 7
Q ss_pred CCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 387 EETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 387 ~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
+ ++++++.|+.++|| +.+++
T Consensus 274 ------g-~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 274 ------K-VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp ------E-EEEEEEETTEEEEE-EESSS
T ss_pred ------c-EEEEEecCCcEEEE-EcCCc
Confidence 8 89999999999999 88443
No 197
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=6.5e-12 Score=114.14 Aligned_cols=282 Identities=9% Similarity=-0.044 Sum_probs=180.9
Q ss_pred cCCEEEEEeC-C----CeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE----------cCCeEEEeecCCCC
Q 046226 101 GNGFIYTGSD-S----NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY----------GDGKIRVWRSTWDN 163 (434)
Q Consensus 101 ~~~~l~tg~~-d----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s----------~dg~i~vwd~~~~~ 163 (434)
+++.+++... + +.|.++|..+++.+.++.....+ .++++|+ .++++. .++.|.++|..+.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 4555555444 2 79999999999999998876666 8999998 566664 46789999998887
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEEcccCccCeEE
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIETIQAHSEPINA 241 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~ 241 (434)
.+..+.+..... .........+.|+||+++++++.. ++.|.+.|+.+++.+.++.....
T Consensus 161 vv~~I~v~g~~r---------------~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---- 221 (426)
T 3c75_H 161 PIADIELPDAPR---------------FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---- 221 (426)
T ss_dssp EEEEEEETTCCC---------------CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----
T ss_pred EEEEEECCCccc---------------cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----
Confidence 776664310000 001123456899999999999874 57899999999999888764321
Q ss_pred EEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCe-EEEEEecCCCEEEEEcCCCeEEEEEcCccccc
Q 046226 242 LVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPV-KTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ 318 (434)
Q Consensus 242 ~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 318 (434)
....|++ .+++.+.||.+.+.+.. ...........+.....++ ..+.+.+++..++.....+.|.+.|+......
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~--~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~ 299 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFA--DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT 299 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECC--TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECC--CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE
Confidence 2333433 56667778888777763 1111110000111111121 23567888888877788899999998543211
Q ss_pred ccccCcc----------cCcccceEEEEeeCCEEEEec----------CCCcEEEEeccCCCceeeEEEeeccccceeEE
Q 046226 319 LQYGGAL----------QGHTHAVMCLASVANYVISGS----------ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCA 378 (434)
Q Consensus 319 ~~~~~~~----------~~~~~~v~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 378 (434)
......+ .........+..+++.+++.. .++.|.++|+.+. +.+..+..- .....+
T Consensus 300 v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~---kvv~~I~vg-~~P~gi 375 (426)
T 3c75_H 300 FRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG---ERINKIELG-HEIDSI 375 (426)
T ss_dssp ECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC---CEEEEEEEE-EEECEE
T ss_pred EeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC---eEEEEEECC-CCcCeE
Confidence 1000000 001111235666667555543 2357999999988 555555432 247889
Q ss_pred EEeecccCCCCCCccc-EEEEee-cCCeEEEEecCCCCcccc
Q 046226 379 IAFLGRFGEETEDEYC-TICTGS-LDGVLKMWRVTRPKSSCG 418 (434)
Q Consensus 379 ~~~~~~~~~~~~~~~~-~l~s~~-~Dg~v~iw~~~~~~~~~~ 418 (434)
+|+|+ ++ ++++.. .++.|.++|+.+.+.+..
T Consensus 376 a~spD---------g~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 376 NVSQD---------AEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EECCS---------SSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEccC---------CCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 99999 77 777777 599999999999987644
No 198
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.52 E-value=3e-11 Score=109.91 Aligned_cols=269 Identities=11% Similarity=0.092 Sum_probs=172.3
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCC----------CccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEe
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAK----------TSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~----------~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~ 170 (434)
.++.|++++.++.|..+|.++++.+...... ......+....+.+++++.++.|..+|..+++.......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5778888888999999999999988765542 222344556677999999999999999988876655532
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCe-----EEEEEc
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPI-----NALVVA 245 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v-----~~~~~~ 245 (434)
... ....+ .. .+..+++++.++.|..+|..+++.+..+....... ......
T Consensus 132 ~~~------------------~~~~p----~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 132 AGE------------------ALSRP----VV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp SSC------------------CCSCC----EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred CCc------------------eEcCC----EE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 110 01111 11 25578888889999999999999888776432211 122222
Q ss_pred CCCeEEEEeCCCeEEEEecccccCcceeEEEEEeccccc---CeEEEEEec--CCCEEEEEcCCCeEEEEEcCccccccc
Q 046226 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYS---PVKTLTLTL--DDGLLYGGCTDGYIHYWHKGWFSAQLQ 320 (434)
Q Consensus 246 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 320 (434)
++.++.+..++.|..+|.. .+............... .+..+...| .+..+++++.++.+..+|..+.+....
T Consensus 188 -~~~v~~g~~~g~l~~~d~~--tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 188 -FGAAVVGGDNGRVSAVLME--QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp -TTEEEECCTTTEEEEEETT--TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred -CCEEEEEcCCCEEEEEECC--CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEee
Confidence 5578888889999999986 22222221110000000 000000111 356788888899999999876654443
Q ss_pred ccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeec-cccceeEEEEeecccCCCCCCcccEEEEe
Q 046226 321 YGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG-HRGPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 321 ~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
.. . .....+...++.++.++.++.|..+|..++ +.+..... ....+...... +..|+.+
T Consensus 265 ~~--~----~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG---~~~w~~~~~~~~~~~~~~~~-----------~~~l~v~ 324 (376)
T 3q7m_A 265 RE--L----GSVNDFIVDGNRIYLVDQNDRVMALTIDGG---VTLWTQSDLLHRLLTSPVLY-----------NGNLVVG 324 (376)
T ss_dssp EC--C----CCEEEEEEETTEEEEEETTCCEEEEETTTC---CEEEEECTTTTSCCCCCEEE-----------TTEEEEE
T ss_pred cc--C----CCCCCceEECCEEEEEcCCCeEEEEECCCC---cEEEeecccCCCcccCCEEE-----------CCEEEEE
Confidence 21 1 224456677888999999999999999988 44444331 12223333333 4578888
Q ss_pred ecCCeEEEEecCCCCcc
Q 046226 400 SLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~ 416 (434)
+.+|.|..+|..+++..
T Consensus 325 ~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 325 DSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred eCCCeEEEEECCCCcEE
Confidence 99999999999988754
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=1.3e-11 Score=122.01 Aligned_cols=207 Identities=8% Similarity=-0.019 Sum_probs=137.2
Q ss_pred CcCCCeEEEEEecCCCEEEEEecCC-----cEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCe-------
Q 046226 192 KHMGPITSIAINVSDDTLYSASLDK-----TIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDAT------- 258 (434)
Q Consensus 192 ~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~------- 258 (434)
+|...+..++|+|||++|+.+..++ .|++||+.+++.+.....+ ..+..++|+||+ .|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3445688999999999998776543 8999999999876643322 236789999999 7777777655
Q ss_pred ---------EEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC-----CCeEEEEEcCc------cccc
Q 046226 259 ---------VRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT-----DGYIHYWHKGW------FSAQ 318 (434)
Q Consensus 259 ---------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~~~ 318 (434)
|++|++.. .......+.....+...+..+.|+|||++|+.++. +..|++||+.. ....
T Consensus 201 ~~~~~~~~~v~~~~l~t--~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGT--DQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp CCCCCCCCEEEEEETTS--CGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccCCCCEEEEEECCC--CcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999862 22112233333334556789999999999888764 67899999864 2111
Q ss_pred ccccCcccCcccce-EEEEeeCCEEEEecCC----CcEEEEeccCCCceeeEEEeecccc--ceeEEEEeecccCCCCCC
Q 046226 319 LQYGGALQGHTHAV-MCLASVANYVISGSAD----STSRVWAREQDGRHTMLAVLVGHRG--PIRCAIAFLGRFGEETED 391 (434)
Q Consensus 319 ~~~~~~~~~~~~~v-~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~ 391 (434)
.. .+..+...+ ..+..+|+.|+..+.+ +.|.+||+.++.. .....+..|.. .+..++|+++
T Consensus 279 ~~---~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 346 (710)
T 2xdw_A 279 WV---KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHEKDVLEWVACVRS-------- 346 (710)
T ss_dssp CE---EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCEEEEEEEETT--------
T ss_pred eE---EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccceeccCCCCCCeEEEEEEEcC--------
Confidence 11 122233222 3355678866655543 3699999987632 12234444544 6778888866
Q ss_pred cccEEEEeecCCe--EEEEecCCCC
Q 046226 392 EYCTICTGSLDGV--LKMWRVTRPK 414 (434)
Q Consensus 392 ~~~~l~s~~~Dg~--v~iw~~~~~~ 414 (434)
+.++++...|+. |.+|++.+++
T Consensus 347 -~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 347 -NFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp -TEEEEEEEETTEEEEEEEETTTCC
T ss_pred -CEEEEEEEECCEEEEEEEECCCCC
Confidence 788999999985 5556665555
No 200
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.50 E-value=5.9e-11 Score=107.95 Aligned_cols=266 Identities=11% Similarity=0.078 Sum_probs=169.3
Q ss_pred EEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCC
Q 046226 98 IAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTG 177 (434)
Q Consensus 98 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 177 (434)
...++..+++++.++.|..+|..+++.+.................+.+++++.++.|..+|..+++............
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~-- 176 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL-- 176 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce--
Confidence 344788889999999999999999998877655433223334556789999999999999998887766553211000
Q ss_pred CceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccC----------eEEEEEcCC
Q 046226 178 GAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEP----------INALVVADD 247 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------v~~~~~~~~ 247 (434)
. ......+ ... +..++.+..++.|..+|..+++.+......... +.......+
T Consensus 177 ----~-------~~~~~~~----~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~ 239 (376)
T 3q7m_A 177 ----S-------LRGESAP----TTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN 239 (376)
T ss_dssp -------------CCCCCC----EEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET
T ss_pred ----e-------ecCCCCc----EEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC
Confidence 0 0001111 111 457888888999999999999988776532110 111111124
Q ss_pred CeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccC
Q 046226 248 GVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQG 327 (434)
Q Consensus 248 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 327 (434)
+.++.++.++.+..+|.. .+.... ... ......+.. ++..+++++.++.|..+|..+.+....... .
T Consensus 240 ~~v~~~~~~g~l~~~d~~--tG~~~w----~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~-~-- 306 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLR--SGQIMW----KRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD-L-- 306 (376)
T ss_dssp TEEEEECTTSCEEEEETT--TCCEEE----EEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT-T--
T ss_pred CEEEEEecCcEEEEEECC--CCcEEe----ecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc-c--
Confidence 578888889999999986 222111 111 122333333 467888888899999999876655443321 1
Q ss_pred cccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeE-EEEeecccCCCCCCcccEEEEeecCCeEE
Q 046226 328 HTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRC-AIAFLGRFGEETEDEYCTICTGSLDGVLK 406 (434)
Q Consensus 328 ~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~ 406 (434)
....+......+..|+.++.+|.|+++|..++ +.+.........+.. .... +..|+.++.||.|+
T Consensus 307 ~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG---~~~~~~~~~~~~~~~~~~~~-----------~~~l~v~~~~G~l~ 372 (376)
T 3q7m_A 307 LHRLLTSPVLYNGNLVVGDSEGYLHWINVEDG---RFVAQQKVDSSGFQTEPVAA-----------DGKLLIQAKDGTVY 372 (376)
T ss_dssp TTSCCCCCEEETTEEEEECTTSEEEEEETTTC---CEEEEEECCTTCBCSCCEEE-----------TTEEEEEBTTSCEE
T ss_pred CCCcccCCEEECCEEEEEeCCCeEEEEECCCC---cEEEEEecCCCcceeCCEEE-----------CCEEEEEeCCCEEE
Confidence 11122333446788999999999999999988 455554443333332 2222 44688889999999
Q ss_pred EEe
Q 046226 407 MWR 409 (434)
Q Consensus 407 iw~ 409 (434)
.|+
T Consensus 373 ~~~ 375 (376)
T 3q7m_A 373 SIT 375 (376)
T ss_dssp EEE
T ss_pred EEe
Confidence 987
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=1.7e-12 Score=127.93 Aligned_cols=243 Identities=8% Similarity=-0.066 Sum_probs=152.5
Q ss_pred eccccEEEEEE--cCCEEE-----EEeCCCeEEEecCCCceeEeeccCCCccE--EEEEEeCC--EEEEEEcCCe-----
Q 046226 90 KKDGQILCIAV--GNGFIY-----TGSDSNVIRIWKQPEFTECGRLKAKTSMV--VAMEVSHD--RVYAAYGDGK----- 153 (434)
Q Consensus 90 ~h~~~v~~~~~--~~~~l~-----tg~~dg~i~iwd~~~~~~~~~~~~~~~~v--~~l~~~~~--~l~~~s~dg~----- 153 (434)
+|...+..++| +|++|| .|+.+..|++||+.+++.+. ..+-..+ ..++|+|| .|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 35557888999 899988 45556799999999987651 1111222 67899998 7888887765
Q ss_pred --------EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC----cEEEE
Q 046226 154 --------IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK----TIKVW 221 (434)
Q Consensus 154 --------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~vw 221 (434)
|++|++.++........ . ...+...+..+.|+|||++|+.++.++ .|++|
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~-~-----------------~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVH-E-----------------RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEE-C-----------------CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCchhceEEE-e-----------------cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 99999876643211110 0 013556788999999999998877666 77888
Q ss_pred EcCCCeeEEEcccCccCeEEEEEcCCCeEEEEe---CCCeEEEEecccccCcceeEEEEEeccc-ccCeEEEEEecCCCE
Q 046226 222 RIRDSKCIETIQAHSEPINALVVADDGVLYSAS---DDATVRVWRRYFYSENQLHTLILTLTAK-YSPVKTLTLTLDDGL 297 (434)
Q Consensus 222 d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ 297 (434)
|..+++ ...+..+...+....+.++++++... .++.|.+||+....... ... ....+ ...+..++++ ++.+
T Consensus 258 ~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~--l~~~~~~~~l~~~~~~-~~~l 332 (695)
T 2bkl_A 258 RPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARAS-WKE--IVPEDSSASLLSVSIV-GGHL 332 (695)
T ss_dssp CTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGG-CEE--EECCCSSCEEEEEEEE-TTEE
T ss_pred cCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccC-CeE--EecCCCCCeEEEEEEE-CCEE
Confidence 766554 34444455556666664433444433 25889999986221111 111 12222 3457788888 6778
Q ss_pred EEEEcCCCeEEEEEcCcccccccccCcccCc-ccceEEEEee--CCEEE----EecCCCcEEEEeccCCC
Q 046226 298 LYGGCTDGYIHYWHKGWFSAQLQYGGALQGH-THAVMCLASV--ANYVI----SGSADSTSRVWAREQDG 360 (434)
Q Consensus 298 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~----s~~~dg~i~iwd~~~~~ 360 (434)
+++...|+..+||.+....... ..+..+ ...+..++++ ++.++ +....+.|++||+.++.
T Consensus 333 v~~~~~dg~~~l~~~~~~g~~~---~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 333 SLEYLKDATSEVRVATLKGKPV---RTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEETTEEEEEEEETTCCEE---EECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEECCEEEEEEEeCCCCee---EEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 8888899988888764211111 112222 4455556554 55554 33345789999998763
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.50 E-value=5e-11 Score=105.42 Aligned_cols=241 Identities=8% Similarity=-0.008 Sum_probs=151.1
Q ss_pred ccEEEEEEeCC-EEEEE--------EcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 133 SMVVAMEVSHD-RVYAA--------YGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 133 ~~v~~l~~~~~-~l~~~--------s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
....+++|+++ .++.+ ..++.|.+||..+++.. .+.. + ...++...+.+++++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~---~--------------~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICK---P--------------EVNGYGGIPAGCQCD 79 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEEC---C--------------EETTEECCEEEEEEC
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEe---c--------------ccCCCCCCCceEEEe
Confidence 34678889876 45544 67899999997655432 1110 0 001244668899999
Q ss_pred cC-CCEEEEEecCCcEEEEEcCCCeeEEE-ccc----CccCeEEEEEcCCC-eEEEEeCC---------------CeEEE
Q 046226 204 VS-DDTLYSASLDKTIKVWRIRDSKCIET-IQA----HSEPINALVVADDG-VLYSASDD---------------ATVRV 261 (434)
Q Consensus 204 ~~-~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~-~l~s~~~d---------------g~i~i 261 (434)
++ +++++ ++..+.|.+||.. ++.... ... ....+.++++.+++ ++++...+ +.|..
T Consensus 80 ~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 80 RDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred cCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 98 65444 4445579999998 665433 221 12458899999999 55544444 45666
Q ss_pred EecccccCcceeEEEEEecccccCeEEEEEe----cCCCEEEEE-cCCCeEEEEEcCc-ccc-cccccCcccCcc-cceE
Q 046226 262 WRRYFYSENQLHTLILTLTAKYSPVKTLTLT----LDDGLLYGG-CTDGYIHYWHKGW-FSA-QLQYGGALQGHT-HAVM 333 (434)
Q Consensus 262 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~i~d~~~-~~~-~~~~~~~~~~~~-~~v~ 333 (434)
||.. ...... .........++++ ++++.|+++ ..++.|.+||+.. ... .......+..+. ..+.
T Consensus 158 ~~~~----g~~~~~----~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 158 FTTD----GQMIQV----DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp ECTT----SCEEEE----EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred ECCC----CCEEEe----ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 6643 111111 1223456789999 998766555 5688999999752 110 001111223333 4456
Q ss_pred EEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCccc-EEEEeecCCeEEEEec
Q 046226 334 CLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYC-TICTGSLDGVLKMWRV 410 (434)
Q Consensus 334 ~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~-~l~s~~~Dg~v~iw~~ 410 (434)
.++++ |+++++...++.|.+||..++ +.+..+..+...+.+++++++ +. ++++...++.|..|++
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~i~~~~d---------g~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPDGG---QPKMRIRCPFEKPSNLHFKPQ---------TKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTCB---SCSEEEECSSSCEEEEEECTT---------SSEEEEEETTTTEEEEEEC
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCCCC---cEeEEEeCCCCCceeEEECCC---------CCEEEEEeCCCCeEEEEeC
Confidence 67765 667777667889999998855 344455566678899999888 77 5556666789999998
Q ss_pred CCC
Q 046226 411 TRP 413 (434)
Q Consensus 411 ~~~ 413 (434)
...
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.49 E-value=3.5e-10 Score=99.09 Aligned_cols=238 Identities=9% Similarity=0.020 Sum_probs=159.5
Q ss_pred cCCCccEEEEEEeCC-EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC
Q 046226 129 KAKTSMVVAMEVSHD-RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD 206 (434)
Q Consensus 129 ~~~~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 206 (434)
..+...+.++++.++ .++.+.. ++.|.+||.. +. ...+.. ..+...+.++++.+++
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~--------------------~~~~~~~~~i~~~~~g 68 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPL--------------------PTPDAKVMCLTISSDG 68 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEC--------------------SSTTCCEEEEEECTTS
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecC--------------------CcccCceeeEEECCCC
Confidence 344567899999987 5666665 7899999976 32 222211 0134678899999999
Q ss_pred CEEEEEecCCcEEEEEcCCCee-EEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEeccccc
Q 046226 207 DTLYSASLDKTIKVWRIRDSKC-IETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYS 284 (434)
Q Consensus 207 ~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 284 (434)
.++++...++.|..||.. ++. ...+......+.++++.+++ ++++...++.|..||.. . .. ..........
T Consensus 69 ~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~---g-~~--~~~~~~~~~~ 141 (299)
T 2z2n_A 69 EVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD---G-KI--REYELPNKGS 141 (299)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT---C-CE--EEEECSSTTC
T ss_pred CEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC---C-CE--EEecCCCCCC
Confidence 888777768899999986 332 22222345578999999988 55555667899999863 1 11 1122233445
Q ss_pred CeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCce
Q 046226 285 PVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRH 362 (434)
Q Consensus 285 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~ 362 (434)
.+..+++++++++.++...++.|..||. ..... .. ........+.++.++ ++++++...++.|.+||. ++. .
T Consensus 142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~--~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~ 215 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-EF--KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-I 215 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EE--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-E
T ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-Ee--eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-E
Confidence 7899999999988887777889999997 32211 11 112233456777775 566666666889999998 542 1
Q ss_pred eeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 363 TMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 363 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
. ......+...+.++++.++ |.+.++...++.|..|+..
T Consensus 216 ~-~~~~~~~~~~~~~i~~~~~---------g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 216 T-EFKIPTPNARPHAITAGAG---------IDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp E-EEECSSTTCCEEEEEECST---------TCEEEEETTTTEEEEEETT
T ss_pred E-EEECCCCCCCceeEEECCC---------CCEEEeccCCceEEEECCC
Confidence 1 1223345567889999988 7777776678899999973
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=6.9e-11 Score=104.50 Aligned_cols=243 Identities=9% Similarity=0.014 Sum_probs=156.3
Q ss_pred cccEEEEEE--cCCEEEE-------EeCCCeEEEecCCCceeEeecc----CCCccEEEEEEeCC--EEEEEEcCCeEEE
Q 046226 92 DGQILCIAV--GNGFIYT-------GSDSNVIRIWKQPEFTECGRLK----AKTSMVVAMEVSHD--RVYAAYGDGKIRV 156 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~t-------g~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~l~~~~~--~l~~~s~dg~i~v 156 (434)
-....+++| ++.++++ +..++.|.+||..+++...... ++...+.+++++++ .+++++..+.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 345678888 6777777 5778999999987776543221 24467899999886 6777777668999
Q ss_pred eecCCCCCcee-eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC---------------CcEEE
Q 046226 157 WRSTWDNGVKH-VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD---------------KTIKV 220 (434)
Q Consensus 157 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~v 220 (434)
||.. ++.... .. ... ......+.++++.++++++++...+ +.|..
T Consensus 97 ~d~~-g~~~~~~~~---~~~---------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 97 VQTD-GTFEEIAKK---DSE---------------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp EETT-SCEEECCSB---CTT---------------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred EeCC-CCEEEEEec---cCC---------------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 9876 432111 10 000 0123458899999999887776655 56777
Q ss_pred EEcCCCeeEEEcccCccCeEEEEEc----CCC-eEEEE-eCCCeEEEEecccccCcceeEEEEEecccc-cCeEEEEEec
Q 046226 221 WRIRDSKCIETIQAHSEPINALVVA----DDG-VLYSA-SDDATVRVWRRYFYSENQLHTLILTLTAKY-SPVKTLTLTL 293 (434)
Q Consensus 221 wd~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~ 293 (434)
||.. ++... +..+......++++ +++ .++.+ ..++.|.+||+..............+..+. ..+..+++++
T Consensus 158 ~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 158 FTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 8765 55433 22334456889999 998 55444 567899999975111001111222333333 5578899999
Q ss_pred CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CC-EEEEecCCCcEEEEeccCC
Q 046226 294 DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--AN-YVISGSADSTSRVWAREQD 359 (434)
Q Consensus 294 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~dg~i~iwd~~~~ 359 (434)
+|+++++...++.|.+||..+.... ..+..+...+.+++++ ++ ++++...++.|..|++...
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~----~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPK----MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCS----EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEe----EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9998888778899999997533221 1222344567788874 56 4455556789999998753
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=1.5e-09 Score=103.07 Aligned_cols=311 Identities=8% Similarity=-0.025 Sum_probs=190.2
Q ss_pred ceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCC--CceeEeeccCCCccEEEEEEe----CC--EEEEEEc
Q 046226 81 SYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQP--EFTECGRLKAKTSMVVAMEVS----HD--RVYAAYG 150 (434)
Q Consensus 81 ~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~l~~~----~~--~l~~~s~ 150 (434)
+.+.+.++.. ...+..+.| +|++|++++.|+.|.+||+. +++.+.++..... ...++|+ |+ ++++++.
T Consensus 186 t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 186 TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEE
T ss_pred CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEc
Confidence 3445555543 234667888 89999999999999999995 7888888776443 6789999 56 5666554
Q ss_pred -CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCC-CeEEEEEecCCCEEE-EEecCCcEEEEEcCCCe
Q 046226 151 -DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMG-PITSIAINVSDDTLY-SASLDKTIKVWRIRDSK 227 (434)
Q Consensus 151 -dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~ 227 (434)
++.|.++|..+.+.+..+........+. ..|.. .+..+..++++..++ ....+|.|.++|....+
T Consensus 264 ~~~~v~ViD~~t~~~~~~i~~~~~~~~~~------------~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 264 WPPQYVIMDGETLEPKKIQSTRGMTYDEQ------------EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp ETTEEEEEETTTCCEEEEEECCEECTTTC------------CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred cCCeEEEEECCCCcEEEEEeccccccccc------------cccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc
Confidence 7999999988777666554321110000 01222 577888888766544 45567999999997754
Q ss_pred eEEEcc-cCccCeEEEEEcCCC-eE-EEEeCCCeEEEEecccccCcceeEEEEE--ecccccCeEEEEEecCCCEEE-EE
Q 046226 228 CIETIQ-AHSEPINALVVADDG-VL-YSASDDATVRVWRRYFYSENQLHTLILT--LTAKYSPVKTLTLTLDDGLLY-GG 301 (434)
Q Consensus 228 ~~~~~~-~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~-~~ 301 (434)
.+.... .......++.|+|++ ++ ++...++.|.++|+.. . .....+.. ...|.+....+ ++|++..++ ++
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t--~-kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~ 407 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE--G-KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATS 407 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT--T-EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC--C-cEEEEEeccCcCCCCccceee-ECCCCCcEEEeC
Confidence 322211 234456788999999 44 4555788999999872 1 11111211 11232212122 578755554 44
Q ss_pred c-CCCeEEEEEcCccccc---ccccCcccCcccc--eEEEEeeCCEEEEecC-------CCcEEEEeccCCCc---eeeE
Q 046226 302 C-TDGYIHYWHKGWFSAQ---LQYGGALQGHTHA--VMCLASVANYVISGSA-------DSTSRVWAREQDGR---HTML 365 (434)
Q Consensus 302 ~-~dg~i~i~d~~~~~~~---~~~~~~~~~~~~~--v~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~---~~~~ 365 (434)
. .++.|.++|....... ++....+...... -.....+++++.+... .+.|.++|+.+.+. ...+
T Consensus 408 ~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~ 487 (567)
T 1qks_A 408 HMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEF 487 (567)
T ss_dssp BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCE
T ss_pred CCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCc
Confidence 3 4689999998752211 2222222222111 1233455677777552 35999999987610 1222
Q ss_pred EEee--------ccccceeEEEEeecccCCCCCCcccEEEEee-----cCCeEEEEecCCCCcccc
Q 046226 366 AVLV--------GHRGPIRCAIAFLGRFGEETEDEYCTICTGS-----LDGVLKMWRVTRPKSSCG 418 (434)
Q Consensus 366 ~~~~--------~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-----~Dg~v~iw~~~~~~~~~~ 418 (434)
..+. .-...+..+.|+++ |+.+..+. .++.|.++|..+.+....
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 488 KTLPIAEWAGITEGQPRVVQGEFNKD---------GTEVWFSVWNGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp EEECHHHHHTCCSSCCEEEEEEECTT---------SSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred EEeccccccccCCCCcceEeeeECCC---------CCEEEEEeecCCCCCCcEEEEECCCceEEEE
Confidence 2221 12346888999998 66665542 379999999998875543
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=3e-10 Score=99.54 Aligned_cols=219 Identities=8% Similarity=0.039 Sum_probs=137.9
Q ss_pred CCCccEEEEEEeCC--E-EEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC
Q 046226 130 AKTSMVVAMEVSHD--R-VYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD 206 (434)
Q Consensus 130 ~~~~~v~~l~~~~~--~-l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 206 (434)
.+..--.+..|+++ . +++...++.|..||..++.. ..+ .....+.++++++++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-----------------------~~~~~~~~i~~~~dG 65 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-----------------------TMDAPVSSVALRQSG 65 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-----------------------ECSSCEEEEEEBTTS
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-----------------------eCCCceEEEEECCCC
Confidence 34445677889884 4 44445588999999875432 111 144678999999999
Q ss_pred CEEEEEecCCcEEEEEcCCCeeEEEccc----CccCeEEEEEcCCCeEEEEe-C---------CCeEEEEecccccCcce
Q 046226 207 DTLYSASLDKTIKVWRIRDSKCIETIQA----HSEPINALVVADDGVLYSAS-D---------DATVRVWRRYFYSENQL 272 (434)
Q Consensus 207 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~s~~-~---------dg~i~iwd~~~~~~~~~ 272 (434)
++++ +. ++.|.+||.++++....... ....++++++.++|.++.++ . ...-.+|.+.. ....
T Consensus 66 ~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~--~g~~ 141 (297)
T 3g4e_A 66 GYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP--DHHV 141 (297)
T ss_dssp SEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT--TSCE
T ss_pred CEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC--CCCE
Confidence 9544 44 56799999988765332221 22457889999999444433 1 12334554431 1111
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEE-EEcCCCeEEEEEcCcccccc---cccCcccCcccceEEEEee--CCEEEEec
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLY-GGCTDGYIHYWHKGWFSAQL---QYGGALQGHTHAVMCLASV--ANYVISGS 346 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~s~~ 346 (434)
... .........++|+|+++.|+ +.+.++.|.+||+....... .....+..+......++++ |++.++..
T Consensus 142 ~~~----~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~ 217 (297)
T 3g4e_A 142 KKY----FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY 217 (297)
T ss_dssp EEE----EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred EEE----eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc
Confidence 111 12234567899999998765 45667899999974211111 1111222233455667765 66777766
Q ss_pred CCCcEEEEeccCCCceeeEEEeeccccceeEEEEe-ec
Q 046226 347 ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF-LG 383 (434)
Q Consensus 347 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 383 (434)
.++.|.+||..++ +.+..+..+...+++++|. |+
T Consensus 218 ~~~~v~~~d~~tG---~~~~~i~~p~~~~t~~~f~g~d 252 (297)
T 3g4e_A 218 NGGRVIRLDPVTG---KRLQTVKLPVDKTTSCCFGGKN 252 (297)
T ss_dssp TTTEEEEECTTTC---CEEEEEECSSSBEEEEEEESGG
T ss_pred CCCEEEEEcCCCc---eEEEEEECCCCCceEEEEeCCC
Confidence 7788999999877 6667777777789999998 76
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=3.6e-12 Score=114.15 Aligned_cols=171 Identities=9% Similarity=0.049 Sum_probs=122.9
Q ss_pred cEEEEEE--cCCEEEEEeCCCeEEEecCCCce-----------eEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecC
Q 046226 94 QILCIAV--GNGFIYTGSDSNVIRIWKQPEFT-----------ECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRST 160 (434)
Q Consensus 94 ~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~-----------~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~ 160 (434)
.+..+++ ...++++|+.++ +++|++++.. ..... .+.. |+.|+|..+.|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 4677777 788899999875 5569865432 11122 3556 99999944577777 88999999998
Q ss_pred CCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeE
Q 046226 161 WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPIN 240 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 240 (434)
......... .|...+.++.+.+. .+++++.||.|.+||+.+++... +...|.
T Consensus 115 sl~~~~~~~----------------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs 166 (388)
T 1xip_A 115 ELSEFRTVT----------------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVT 166 (388)
T ss_dssp STTCEEEEE----------------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEE
T ss_pred hhhccCccc----------------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCce
Confidence 665333221 35666777777644 38889999999999999877643 456899
Q ss_pred EEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEe------c---ccccCeEEEEEecCCCEEEEE
Q 046226 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTL------T---AKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 241 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~~~ 301 (434)
|++|+|+| ++.|..||.+++|+.. ..... ....+ . .|...|.++.|.+++.++++-
T Consensus 167 ~v~WSpkG-~~vg~~dg~i~~~~~~---~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 167 SFDVTNSQ-LAVLLKDRSFQSFAWR---NGEME-KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEECSSE-EEEEETTSCEEEEEEE---TTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCc-eEEEEcCCcEEEEcCC---Ccccc-ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99999999 7789999999999876 11110 01222 2 356789999999998888873
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.40 E-value=5.7e-11 Score=117.94 Aligned_cols=241 Identities=7% Similarity=-0.043 Sum_probs=148.4
Q ss_pred ccccEEEEEE--cCCEEEEEeCC-----CeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCe---------
Q 046226 91 KDGQILCIAV--GNGFIYTGSDS-----NVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGK--------- 153 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~--------- 153 (434)
|...+..++| ||++||.+..+ ..|++||+.+++.+... .+...+..++|+|| .|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------C
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccC
Confidence 3346788888 89998887654 46999999998875431 12222357889997 7777776543
Q ss_pred -----EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC-----cEEEEEc
Q 046226 154 -----IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK-----TIKVWRI 223 (434)
Q Consensus 154 -----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~vwd~ 223 (434)
|++|++.++........ . ...+...+..+.|+|||++|+..+.++ .|++||+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~-~-----------------~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~ 301 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVF-A-----------------TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARV 301 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEE-C-----------------CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEE
T ss_pred CCCCEEEEEECCCCchhCEEEe-c-----------------cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEEC
Confidence 88888765542211110 0 012334588999999999988777544 8999999
Q ss_pred CCC--eeEEEcccCccCeEEEEEcCCC-eEEEEeC----CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCC
Q 046226 224 RDS--KCIETIQAHSEPINALVVADDG-VLYSASD----DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDG 296 (434)
Q Consensus 224 ~~~--~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 296 (434)
.++ ++...+..+...+....+ +++ .|+..+. ++.|.+||+.... .........+...+..+.+. ++.
T Consensus 302 ~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~l~~~~~~~l~~~~~~-~~~ 375 (741)
T 1yr2_A 302 TNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGST----PRFDTVVPESKDNLESVGIA-GNR 375 (741)
T ss_dssp ETTEECCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEECSSSS----CEEEEEECCCSSEEEEEEEE-BTE
T ss_pred CCCCCcccEEecCCCCceEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCc----cccEEEecCCCCeEEEEEEE-CCE
Confidence 877 314555555555555544 666 6665554 3559999876211 12222233444456677777 566
Q ss_pred EEEEEcCCCeEEEEEcCcccccccccCcccC-cccceEEEEee--CCEEE-E---ecCCCcEEEEeccCC
Q 046226 297 LLYGGCTDGYIHYWHKGWFSAQLQYGGALQG-HTHAVMCLASV--ANYVI-S---GSADSTSRVWAREQD 359 (434)
Q Consensus 297 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~-s---~~~dg~i~iwd~~~~ 359 (434)
++++...|+..+||.+....... ..+.. +...+..++++ ++.++ + ....+.|++||+.++
T Consensus 376 lv~~~~~dg~~~l~~~~~~g~~~---~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFDLDGKPA---GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEEEETTEEEEEEEETTSCEE---EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEEEEECCEEEEEEEeCCCCce---eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 78888889988877654211111 11222 34567777764 44333 2 334578999999876
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=1.2e-09 Score=100.01 Aligned_cols=239 Identities=13% Similarity=0.066 Sum_probs=149.2
Q ss_pred ccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcCC--eEEEeecCCCCCce
Q 046226 93 GQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGDG--KIRVWRSTWDNGVK 166 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~dg--~i~vwd~~~~~~~~ 166 (434)
.....|++ +++++++...++.|++||..++............ . ++|+++ .|+++..++ .|.+|+........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 35788898 6777777777899999999887766554443332 3 888886 677777755 78888875443322
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE----cccCccCe--E
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET----IQAHSEPI--N 240 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~v--~ 240 (434)
... ... ......+.+++++|++..|+.+..++.|+.||..++..... ..++...- .
T Consensus 209 ~~g--~~~----------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 209 RIG--QLG----------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEE--ECC----------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred Eee--ecc----------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 210 000 01345678899999666666677788999999987753322 22222222 3
Q ss_pred EEEEcCC-C-eEEEEeCCCeEEEEecccccCcceeEEEEEec------------ccccCeEEEEEecCCCEEEEEc-CCC
Q 046226 241 ALVVADD-G-VLYSASDDATVRVWRRYFYSENQLHTLILTLT------------AKYSPVKTLTLTLDDGLLYGGC-TDG 305 (434)
Q Consensus 241 ~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~-~dg 305 (434)
.++++|+ + ++++-..++.|+.||.. .. . ....... ........++++++|+++++-. .++
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~---g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPD---GE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT---CC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecC---CC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 9999995 5 66666678899999865 11 1 1111110 0123578999999999777777 889
Q ss_pred eEEEEEcCcccccccccC-c---------ccCcccceEEEEee--CCEEEEecCCCcEEEEec
Q 046226 306 YIHYWHKGWFSAQLQYGG-A---------LQGHTHAVMCLASV--ANYVISGSADSTSRVWAR 356 (434)
Q Consensus 306 ~i~i~d~~~~~~~~~~~~-~---------~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~ 356 (434)
.|+.||+........... . ....-.....++++ +.++++-..++.|+.+++
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999643321110000 0 00112345667765 446666667778877765
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=3.4e-10 Score=103.67 Aligned_cols=235 Identities=11% Similarity=0.027 Sum_probs=150.7
Q ss_pred cEEEEEEeCC-EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE
Q 046226 134 MVVAMEVSHD-RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 134 ~v~~l~~~~~-~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
....|+++++ .|+.+. .++.|++||...+....... ...... ++|+++++.|++
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~-----------------------~~~~~~-ia~~~~g~~l~~ 187 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP-----------------------GFKGGK-PAVTKDKQRVYS 187 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE-----------------------TCCBCB-CEECTTSSEEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec-----------------------cCCCCc-eeEecCCCcEEE
Confidence 5788999887 555554 46899999986543322211 112223 899999999998
Q ss_pred EecCC--cEEEEEcCCCeeEEEc----ccCccCeEEEEEcC-CCeEEEEeCCCeEEEEecccccCcceeEEEEE--eccc
Q 046226 212 ASLDK--TIKVWRIRDSKCIETI----QAHSEPINALVVAD-DGVLYSASDDATVRVWRRYFYSENQLHTLILT--LTAK 282 (434)
Q Consensus 212 ~~~dg--~i~vwd~~~~~~~~~~----~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~ 282 (434)
+..++ .|.+++...+.....+ ......+.+++++| ++.|+.+..++.|+.||.... . ...... ..+.
T Consensus 188 ~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~---~-~~~~~~~~~~g~ 263 (409)
T 3hrp_A 188 IGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ---E-VTLIKQLELSGS 263 (409)
T ss_dssp EBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC---C-EEEEEECCCCSC
T ss_pred EecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC---C-EEEEecccccCC
Confidence 88766 7999998765543333 22456678999999 566666777899999997611 1 111111 1111
Q ss_pred ccCe--EEEEEecC-CCEEEEEcCCCeEEEEEcCcccccccccCc--ccC---------cccceEEEEee--CCEEEEec
Q 046226 283 YSPV--KTLTLTLD-DGLLYGGCTDGYIHYWHKGWFSAQLQYGGA--LQG---------HTHAVMCLASV--ANYVISGS 346 (434)
Q Consensus 283 ~~~v--~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~---------~~~~v~~~~~~--~~~l~s~~ 346 (434)
...- ..++|+|+ +.++++-..++.|+.|+...... .+... ..+ .-.....++++ |+++++-.
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~--~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECE--WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE--EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEE--EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 1111 38999995 55566666788999998753211 11000 000 11235667775 66777777
Q ss_pred -CCCcEEEEeccCCCceeeEEEeecc---------------ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEec
Q 046226 347 -ADSTSRVWAREQDGRHTMLAVLVGH---------------RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 347 -~dg~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
.++.|+.|++.++ . +..+.++ -.....+++.++ +.++++-..++.|+.+++
T Consensus 342 ~~~~~I~~~~~~~G---~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~---------g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 342 FKGYCLRKLDILDG---Y-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE---------GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTCEEEEEETTTT---E-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS---------SEEEEEESTTCEEEEEEE
T ss_pred CCCCEEEEEECCCC---E-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC---------CCEEEEECCCCeEEEEEe
Confidence 8899999998765 2 3333333 235778999988 888888888899988876
Q ss_pred C
Q 046226 411 T 411 (434)
Q Consensus 411 ~ 411 (434)
+
T Consensus 409 e 409 (409)
T 3hrp_A 409 E 409 (409)
T ss_dssp C
T ss_pred C
Confidence 3
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.9e-11 Score=109.48 Aligned_cols=163 Identities=12% Similarity=-0.034 Sum_probs=119.7
Q ss_pred CeEEEEEecCCCEEEEEecCCcEEEEEcCCCe-----------eEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEe
Q 046226 196 PITSIAINVSDDTLYSASLDKTIKVWRIRDSK-----------CIETIQAHSEPINALVVADDG-VLYSASDDATVRVWR 263 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd 263 (434)
.+..+++++...++++|+.++ +++|++...+ ..... .+.. |+.++| ++ .|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999875 6669875433 11222 2455 999999 55 77777 889999999
Q ss_pred cccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEE
Q 046226 264 RYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVI 343 (434)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 343 (434)
++... ... ....+...+..+.+.+. .+++++.||.|.+||+...... .+...|.|++|+++-++
T Consensus 113 v~sl~---~~~---~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------~~~~~Vs~v~WSpkG~~ 176 (388)
T 1xip_A 113 LEELS---EFR---TVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------QLAQNVTSFDVTNSQLA 176 (388)
T ss_dssp SSSTT---CEE---EEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------EEEESEEEEEECSSEEE
T ss_pred chhhh---ccC---ccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------cccCCceEEEEcCCceE
Confidence 87332 111 22334556777776654 3888899999999999744321 14568999999987789
Q ss_pred EecCCCcEEEEeccCCCceee--EEEe------e---ccccceeEEEEeec
Q 046226 344 SGSADSTSRVWAREQDGRHTM--LAVL------V---GHRGPIRCAIAFLG 383 (434)
Q Consensus 344 s~~~dg~i~iwd~~~~~~~~~--~~~~------~---~h~~~v~~~~~~~~ 383 (434)
.|..||.+++|+.... .. ..++ . +|...|.++.|.++
T Consensus 177 vg~~dg~i~~~~~~~~---~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNG---EMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp EEETTSCEEEEEEETT---EEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred EEEcCCcEEEEcCCCc---cccccceecCCcccccccCCCeeEEEEEEecC
Confidence 9999999999988775 32 3444 2 47888999999987
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=1.8e-09 Score=94.64 Aligned_cols=223 Identities=8% Similarity=-0.007 Sum_probs=138.5
Q ss_pred ccccEEEEEE---cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCce
Q 046226 91 KDGQILCIAV---GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVK 166 (434)
Q Consensus 91 h~~~v~~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~ 166 (434)
+..---+..| ++.++++...++.|..||..+++.. .+. ....+.+++++++ .++++. ++.|.+||..+++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEE
Confidence 3344556777 3567777778899999999876542 222 3467999999987 555555 6779999986543211
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC---------CcEEEEEcCC-CeeEEEcccCc
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD---------KTIKVWRIRD-SKCIETIQAHS 236 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------g~i~vwd~~~-~~~~~~~~~~~ 236 (434)
.... .. ......+.++++.|+|+++++...+ ..-.+|.+.. ++. ..+..+.
T Consensus 88 ~~~~---~~---------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~ 148 (297)
T 3g4e_A 88 LATV---DN---------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQV 148 (297)
T ss_dssp EEEC---CT---------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEE
T ss_pred EEec---CC---------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeecc
Confidence 1110 00 0123457889999999966654322 2234454432 333 2233344
Q ss_pred cCeEEEEEcCCC-e-EEEEeCCCeEEEEecccccCcc-eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcC
Q 046226 237 EPINALVVADDG-V-LYSASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 237 ~~v~~~~~~~~~-~-l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 313 (434)
...+.++|+|++ . +++.+.++.|.+||+....... .......+.........++++++|++.++...++.|.+||..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 556899999998 4 4566678899999874112211 122233333344567889999999887777778899999975
Q ss_pred cccccccccCcccCcccceEEEEeeC
Q 046226 314 WFSAQLQYGGALQGHTHAVMCLASVA 339 (434)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~v~~~~~~~ 339 (434)
+.+.. ..+..+...+++++|.+
T Consensus 229 tG~~~----~~i~~p~~~~t~~~f~g 250 (297)
T 3g4e_A 229 TGKRL----QTVKLPVDKTTSCCFGG 250 (297)
T ss_dssp TCCEE----EEEECSSSBEEEEEEES
T ss_pred CceEE----EEEECCCCCceEEEEeC
Confidence 33322 22334445678888863
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=9.5e-11 Score=105.05 Aligned_cols=269 Identities=9% Similarity=-0.008 Sum_probs=162.4
Q ss_pred ccEEEEEE--cCCEEEEEe--CCCeEEEecCCCceeEeec-------cCCCccEEEEEEeCC-EEEEEEc------CCeE
Q 046226 93 GQILCIAV--GNGFIYTGS--DSNVIRIWKQPEFTECGRL-------KAKTSMVVAMEVSHD-RVYAAYG------DGKI 154 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~--~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~l~~~~~-~l~~~s~------dg~i 154 (434)
.....+++ +|+++++.. .++.++||.+.+++.. .+ ..+-..+..++++++ .|+.+.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67889999 678888763 2343556655455433 22 234567999999986 6666553 4789
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-e---cCCcEEEEEcCCCeeEE
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-S---LDKTIKVWRIRDSKCIE 230 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~---~dg~i~vwd~~~~~~~~ 230 (434)
.+||+.+++.+..+.+... ...+...+..+++++++..++.+ . .++.|.+||+.+++...
T Consensus 96 ~~~d~~tg~~~~~~~~~~~----------------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPP----------------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp EEEETTTTEEEEEEECCTT----------------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred EEEECCCCeEEEEEECChh----------------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 9999887654444432100 01234557899999876555444 3 57899999999888777
Q ss_pred EcccCccCeE-EEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC-eE
Q 046226 231 TIQAHSEPIN-ALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG-YI 307 (434)
Q Consensus 231 ~~~~~~~~v~-~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i 307 (434)
.+..|..... ...+..++ .+.+...++.++.|. ..+..++++|+++.|+.+..++ .|
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------------~~~~gia~s~dg~~ly~~~~~~~~l 219 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------------LGVNGIVLDAENEWLYLSPMHSTSM 219 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------------CCEEEEEECTTSCEEEEEESSCSEE
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceecee--------------------cccceeEeccCCCEEEEEeCCCCeE
Confidence 6655422110 13334456 555667777776552 1356799999999888887766 55
Q ss_pred EEEEcCcccc----cccccCc--ccCcccceEEEEe--eCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEE
Q 046226 308 HYWHKGWFSA----QLQYGGA--LQGHTHAVMCLAS--VANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAI 379 (434)
Q Consensus 308 ~i~d~~~~~~----~~~~~~~--~~~~~~~v~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 379 (434)
..++...... ....... ..++......+++ +|+++++...++.|.+||..++. ...+.. ..+...+.+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~-~~~~~~p~~va 297 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVT-DEKLSWTDSFN 297 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEE-CGGGSCEEEEE
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEE-CCceecCCeeE
Confidence 5554321000 0000000 1122223334444 57788888889999999985441 122222 12345678899
Q ss_pred EeecccCCCCCCcccEEEEeecCCeEEEEe
Q 046226 380 AFLGRFGEETEDEYCTICTGSLDGVLKMWR 409 (434)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~ 409 (434)
+.++ +.++++.+..+.+.+|.
T Consensus 298 ~~~~---------g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 298 FGSD---------GYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp ECTT---------SCEEEEECCGGGSGGGB
T ss_pred ECCC---------CcEEEEeCccccccccc
Confidence 9887 77777777655554443
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.36 E-value=7.8e-09 Score=90.42 Aligned_cols=237 Identities=10% Similarity=0.017 Sum_probs=156.5
Q ss_pred CCCccEEEEEEeCC-EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCC
Q 046226 130 AKTSMVVAMEVSHD-RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDD 207 (434)
Q Consensus 130 ~~~~~v~~l~~~~~-~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 207 (434)
.....+.++++.++ .++.+. .++.|.+||.. ++ ...+.. ......+.++++.++++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~-~~~~~~--------------------~~~~~~~~~i~~~~~g~ 74 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR-IKEFEV--------------------PTPDAKVMCLIVSSLGD 74 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEEC--------------------SSTTCCEEEEEECTTSC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc-eEEEEC--------------------CCCCCcceeEEECCCCC
Confidence 34567889999886 555555 57899999876 32 222211 02345688999999998
Q ss_pred EEEEEecCCcEEEEEcCCCeeE-EEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccC
Q 046226 208 TLYSASLDKTIKVWRIRDSKCI-ETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSP 285 (434)
Q Consensus 208 ~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 285 (434)
++++...++.|..+|.. ++.. ..+......+.++++.+++ ++++...++.|..+|.. . ... ..........
T Consensus 75 l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~---g-~~~--~~~~~~~~~~ 147 (300)
T 2qc5_A 75 IWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD---G-TIY--EYDLPNKGSY 147 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT---S-CEE--EEECSSTTCC
T ss_pred EEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC---C-CEE--EccCCCCCCC
Confidence 77777667889999987 5543 2222234678999999988 55555557889999864 1 111 1123334457
Q ss_pred eEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCcee
Q 046226 286 VKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHT 363 (434)
Q Consensus 286 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 363 (434)
+..+++++++++.++...++.|..||.. .... .+ ....+...+.++.++ +++.++....+.|.+||. ++. .
T Consensus 148 ~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~-~~--~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~--~ 220 (300)
T 2qc5_A 148 PAFITLGSDNALWFTENQNNSIGRITNT-GKLE-EY--PLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE--I 220 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECTT-CCEE-EE--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--E
T ss_pred ceeEEECCCCCEEEEecCCCeEEEECCC-CcEE-Ee--eCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc--E
Confidence 8899999999977776668899999873 2111 11 122333456777775 556666666778999998 331 1
Q ss_pred eEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecC
Q 046226 364 MLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVT 411 (434)
Q Consensus 364 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~ 411 (434)
....+..+...+.++++.++ +.+.++...++.|..|+..
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~---------g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKN---------SEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEEECSSTTCCEEEEEECST---------TCEEEEETTTTEEEEECTT
T ss_pred EEEECCCCCCCceEEEECCC---------CCEEEeccCCCeEEEECCC
Confidence 22223344566888999888 7777777677899999873
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.36 E-value=4.8e-10 Score=109.64 Aligned_cols=281 Identities=10% Similarity=0.061 Sum_probs=170.6
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCcc-----------EEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSM-----------VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-----------v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
.+..|++++.++.|..+|..+++.+.++..+... -..+.+..+.+++++.|+.|..+|..+++.+....
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 5778888888999999999999998887543221 12345567799999999999999999988877664
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe------cCCcEEEEEcCCCeeEEEcccCc-------
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS------LDKTIKVWRIRDSKCIETIQAHS------- 236 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~------- 236 (434)
........ ......++ + .++ .++++. .+|.|+.||.++|+.+..+....
T Consensus 149 ~~~~~~~~------------~~~~~sP~----v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 210 (689)
T 1yiq_A 149 TRADHKRS------------YTITGAPR----V-VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPP 210 (689)
T ss_dssp CCSCTTSC------------CBCCSCCE----E-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred CcCCCCCC------------ccccCCcE----E-ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccc
Confidence 32000000 00011111 1 133 445443 36899999999999988765210
Q ss_pred ------------------------cCeEEEEEcCCC-eEEEEeCCCe-------------------EEEEecccccCcce
Q 046226 237 ------------------------EPINALVVADDG-VLYSASDDAT-------------------VRVWRRYFYSENQL 272 (434)
Q Consensus 237 ------------------------~~v~~~~~~~~~-~l~s~~~dg~-------------------i~iwd~~~~~~~~~ 272 (434)
.....+++.++. +++.+..++. |..+|.. ++...
T Consensus 211 ~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~--TG~~~ 288 (689)
T 1yiq_A 211 EGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD--TGEYV 288 (689)
T ss_dssp CSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT--TCCEE
T ss_pred ccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc--CCcee
Confidence 011256777766 8888877764 8899887 22222
Q ss_pred eEEEEEecccc-------cCeEEEEEecCCC---EEEEEcCCCeEEEEEcCcccccccccCc------------------
Q 046226 273 HTLILTLTAKY-------SPVKTLTLTLDDG---LLYGGCTDGYIHYWHKGWFSAQLQYGGA------------------ 324 (434)
Q Consensus 273 ~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------ 324 (434)
... ....|. .++.......+|+ .++.++.+|.++++|..+.+........
T Consensus 289 W~~--~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~ 366 (689)
T 1yiq_A 289 WHY--QTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILD 366 (689)
T ss_dssp EEE--ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEEC
T ss_pred Eee--ecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccc
Confidence 221 111121 1222223333554 7889999999999998766543111000
Q ss_pred ------ccCcccce-----------EEEEee--CCEEEEec---------------------------------------
Q 046226 325 ------LQGHTHAV-----------MCLASV--ANYVISGS--------------------------------------- 346 (434)
Q Consensus 325 ------~~~~~~~v-----------~~~~~~--~~~l~s~~--------------------------------------- 346 (434)
.......+ ..++++ ..++++..
T Consensus 367 ~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 446 (689)
T 1yiq_A 367 EENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGL 446 (689)
T ss_dssp HHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHH
T ss_pred hhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccC
Confidence 00000000 013343 33444431
Q ss_pred ------CCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 347 ------ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 347 ------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.+|.|+.||+.++ +.+-.+..+. ++....+... +.+++.|+.||.|+.||.++++.+
T Consensus 447 ~~~~~~~~g~l~A~D~~tG---~~~W~~~~~~-~~~~g~~~ta---------gglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 447 LEMAKSWSGKLIAWDPVKQ---QAAWEVPYVT-IFNGGTLSTA---------GNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp HHHHTTCEEEEEEEETTTT---EEEEEEEESS-SCCCCEEEET---------TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCCCCcceeEEEEECCCC---CeEeEccCCC-CccCccceEC---------CCEEEEECCCCcEEEEECCCCccc
Confidence 1478999999998 5555555443 2333344444 778999999999999999999875
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=1.1e-10 Score=104.29 Aligned_cols=264 Identities=9% Similarity=-0.053 Sum_probs=164.3
Q ss_pred eEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE----------cCCeEEEeecCCCCCceeeEeeeccCCCCce
Q 046226 113 VIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY----------GDGKIRVWRSTWDNGVKHVKLATIPKTGGAV 180 (434)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 180 (434)
.|.++|..+++.+.++.....+ .+.++|+ .++++. .++.|.+||..+.+.+..+.+....
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~------ 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP------ 118 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC------
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc------
Confidence 8889999999999998766666 7999998 666665 3789999999988887776532000
Q ss_pred eEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEE--EEcCCCeeEEEcccCccCeEEEEEcCCC--eEEEEe
Q 046226 181 RNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKV--WRIRDSKCIETIQAHSEPINALVVADDG--VLYSAS 254 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~ 254 (434)
.+ ........++++|||++++++.. +..|.+ +|+.+ +..+.... . +.+.|++ .+++.+
T Consensus 119 --------~~-~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~---~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 119 --------RF-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C---FHIHPGAAATHYLGS 182 (368)
T ss_dssp --------SC-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C---CCCEEEETTEEECCC
T ss_pred --------cc-ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c---eEEccCCCeEEEEEc
Confidence 00 00123567899999999999875 457888 99877 44443211 1 1223444 566677
Q ss_pred CCCeEEEEecccccCcceeEEEE----EecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcc-----
Q 046226 255 DDATVRVWRRYFYSENQLHTLIL----TLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGAL----- 325 (434)
Q Consensus 255 ~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----- 325 (434)
.||.+.+.|+...... ..+... .+.....+. . .+++..++..+. +.|.+.|+............+
T Consensus 183 ~dg~~~~vd~~~~~~~-~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~ 256 (368)
T 1mda_H 183 CPASLAASDLAAAPAA-AGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CTTSCEEEECCSSCCC-CEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred CCCCEEEEECcccccc-CCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence 8888888887620000 011110 011112233 3 666666666666 999999985422111100000
Q ss_pred -----cCcccceEEEEeeCCEEEEecC---------CCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCC
Q 046226 326 -----QGHTHAVMCLASVANYVISGSA---------DSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETED 391 (434)
Q Consensus 326 -----~~~~~~v~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 391 (434)
.........+..+++.++.+.. ++.+.++|+.+. +.+..+.... ....++++|+
T Consensus 257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---~vv~~i~vg~-~p~gi~~s~D-------- 324 (368)
T 1mda_H 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---QTSGPISNGH-DSDAIIAAQD-------- 324 (368)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---CEEECCEEEE-EECEEEECCS--------
T ss_pred cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---eEEEEEECCC-CcceEEECCC--------
Confidence 0111122456667776665432 235669999987 5555554433 5788999999
Q ss_pred ccc-EEEEee-cCCeEEEEecCCCCccccc
Q 046226 392 EYC-TICTGS-LDGVLKMWRVTRPKSSCGH 419 (434)
Q Consensus 392 ~~~-~l~s~~-~Dg~v~iw~~~~~~~~~~~ 419 (434)
++ ++++.. .++.|.++|+.+.+.+...
T Consensus 325 -g~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 325 -GASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp -SSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred -CCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 65 567776 5999999999998866433
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.34 E-value=4.5e-10 Score=109.57 Aligned_cols=282 Identities=9% Similarity=0.052 Sum_probs=173.8
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc-----------cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS-----------MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
.+..|++++.++.|..+|..+++.+.++..... ....+++..+.+++++.|+.|..+|..+++.+....
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 577788888899999999999999987764321 113455677799999999999999999888777664
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec------CCcEEEEEcCCCeeEEEcccCccC-----
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL------DKTIKVWRIRDSKCIETIQAHSEP----- 238 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~----- 238 (434)
.......+. .....++ + .+..+++++. +|.|+.+|..+|+.+..+......
T Consensus 156 ~~~~~~~~~------------~~~~~p~----v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~ 217 (677)
T 1kb0_A 156 TFEGQKGSL------------TITGAPR----V--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPF 217 (677)
T ss_dssp TTTTCCSSC------------BCCSCCE----E--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred CCcCcCcCc------------ccccCcE----E--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccc
Confidence 320000000 0011111 1 1445555543 689999999999998877542211
Q ss_pred ---------------------------eEEEEEcCCC-eEEEEeCCC-------------------eEEEEecccccCcc
Q 046226 239 ---------------------------INALVVADDG-VLYSASDDA-------------------TVRVWRRYFYSENQ 271 (434)
Q Consensus 239 ---------------------------v~~~~~~~~~-~l~s~~~dg-------------------~i~iwd~~~~~~~~ 271 (434)
...+++.+++ +++.+..++ .|..+|.. ++..
T Consensus 218 ~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~--TG~~ 295 (677)
T 1kb0_A 218 EDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD--TGKY 295 (677)
T ss_dssp SSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT--TCCE
T ss_pred cccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC--CCCE
Confidence 1346777776 777776654 48888876 2222
Q ss_pred eeEEEEEecccc-------cCeEEEEEecCC---CEEEEEcCCCeEEEEEcCcccccccccCcccC-------cccce--
Q 046226 272 LHTLILTLTAKY-------SPVKTLTLTLDD---GLLYGGCTDGYIHYWHKGWFSAQLQYGGALQG-------HTHAV-- 332 (434)
Q Consensus 272 ~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~v-- 332 (434)
... .....+. .....+....+| ..++.++.+|.|+++|..+.+........... ....+
T Consensus 296 ~W~--~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~ 373 (677)
T 1kb0_A 296 KWH--YQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGI 373 (677)
T ss_dssp EEE--EESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEEC
T ss_pred EEE--EecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeec
Confidence 222 1222221 122223334467 68999999999999998766543322100000 00000
Q ss_pred ----------------------EEEEee--CCEEEEecC-----------------------------------------
Q 046226 333 ----------------------MCLASV--ANYVISGSA----------------------------------------- 347 (434)
Q Consensus 333 ----------------------~~~~~~--~~~l~s~~~----------------------------------------- 347 (434)
..++++ ..++++...
T Consensus 374 ~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (677)
T 1kb0_A 374 AAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKS 453 (677)
T ss_dssp GGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCS
T ss_pred cccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCC
Confidence 123444 445555322
Q ss_pred --CCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCccc
Q 046226 348 --DSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 348 --dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 417 (434)
.|.|..||+.++ +.+..+. +..++....+... +.+++.++.||.|++||..+++.+.
T Consensus 454 ~~~g~l~A~D~~tG---~~~W~~~-~~~~~~~g~~~~~---------g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 454 KPFGRLLAWDPVAQ---KAAWSVE-HVSPWNGGTLTTA---------GNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp CCEEEEEEEETTTT---EEEEEEE-ESSSCCCCEEEET---------TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCccEEEEEeCCCC---cEEeecC-CCCCCcCcceEeC---------CCEEEEECCCCcEEEEECCCCceee
Confidence 278999999988 5555543 3334455555555 6788889999999999999998753
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.32 E-value=8.7e-11 Score=104.64 Aligned_cols=267 Identities=15% Similarity=0.104 Sum_probs=163.5
Q ss_pred ccccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 91 KDGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 91 h~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
+...+.++.. .+..|+.++.+ |..+|. +++....+...........+..+.+++++.++.|..+|.. ++......
T Consensus 58 ~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 58 GEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp GGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred CCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence 4445677777 46677777766 888885 6665555443333333344456688999989999999976 44333321
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCe
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGV 249 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 249 (434)
.....+.++...+++. ++.++.++.|..+|.. ++.+..+......+.++...+++.
T Consensus 134 ----------------------~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~ 189 (330)
T 3hxj_A 134 ----------------------TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT 189 (330)
T ss_dssp ----------------------CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC
T ss_pred ----------------------CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE
Confidence 1222344555555665 6667778999999998 887777766666777888877886
Q ss_pred EEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcc
Q 046226 250 LYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHT 329 (434)
Q Consensus 250 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 329 (434)
+..++ +.|..+| . ... ...........+.++...+++. |++++.++.|..+|... ...... ....
T Consensus 190 l~v~t--~~l~~~d-~--~g~----~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~~~~----~~~~ 254 (330)
T 3hxj_A 190 IYFGS--DKVYAIN-P--DGT----EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEKWRF----KTGK 254 (330)
T ss_dssp EEEES--SSEEEEC-T--TSC----EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEEEEE----ECSS
T ss_pred EEEEe--CEEEEEC-C--CCc----EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEeEEe----eCCC
Confidence 66666 7788888 3 111 1222223335577788877765 55667778888887432 111111 1111
Q ss_pred cceEEEEee-CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEE
Q 046226 330 HAVMCLASV-ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408 (434)
Q Consensus 330 ~~v~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw 408 (434)
..+..+..+ +..|..++.+|.|..+|. ++ +.+..+......+.++...++ + .|..++.+|.+++.
T Consensus 255 ~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g---~~~~~~~~~~~~~~~~~~d~~---------g-~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 255 RIESSPVIGNTDTIYFGSYDGHLYAINP-DG---TEKWNFETGSWIIATPVIDEN---------G-TIYFGTRNGKFYAL 320 (330)
T ss_dssp CCCSCCEECTTSCEEEECTTCEEEEECT-TS---CEEEEEECSSCCCSCCEECTT---------C-CEEEECTTSCEEEE
T ss_pred CccccceEcCCCeEEEecCCCCEEEECC-CC---cEEEEEEcCCccccceEEcCC---------C-EEEEEcCCCeEEEE
Confidence 122233344 557788888989999996 44 334444444455666666444 4 46778899999998
Q ss_pred ecCCCC
Q 046226 409 RVTRPK 414 (434)
Q Consensus 409 ~~~~~~ 414 (434)
..+..+
T Consensus 321 ~~~~~~ 326 (330)
T 3hxj_A 321 FNLEHH 326 (330)
T ss_dssp EC----
T ss_pred eccccc
Confidence 876544
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.31 E-value=4.7e-09 Score=93.19 Aligned_cols=212 Identities=7% Similarity=-0.090 Sum_probs=128.5
Q ss_pred EEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE
Q 046226 135 VVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 135 v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
..+..|+++ .+++...++.|..||..++.. ..+ .....+.+++++++++++++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-----------------------~~~~~v~~i~~~~dg~l~v~ 106 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TVH-----------------------ALPFMGSALAKISDSKQLIA 106 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE-----------------------ECSSCEEEEEEEETTEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE-----------------------ECCCcceEEEEeCCCeEEEE
Confidence 456778884 444555688999999865421 111 13356899999999887665
Q ss_pred EecCCcEEEEEcCCCeeEEEccc----CccCeEEEEEcCCCeEEEEeCC-----CeEEEEecccccCcceeEEEEEeccc
Q 046226 212 ASLDKTIKVWRIRDSKCIETIQA----HSEPINALVVADDGVLYSASDD-----ATVRVWRRYFYSENQLHTLILTLTAK 282 (434)
Q Consensus 212 ~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~ 282 (434)
. .+ .|.+||..+++....... ....+.+++++++|.++.++.+ +...+|.+. .. ..... ...
T Consensus 107 ~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~~~~----~~~ 177 (326)
T 2ghs_A 107 S-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-KVTKL----FAD 177 (326)
T ss_dssp E-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-EEEEE----EEE
T ss_pred E-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-cEEEe----eCC
Confidence 4 44 499999988775332221 1246889999999944434321 223444433 11 11111 122
Q ss_pred ccCeEEEEEecCCCEEEEE-cCCCeEEEEEcC--cc-ccc-ccccCcccCcccceEEEEee--CCEEEEecCCCcEEEEe
Q 046226 283 YSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKG--WF-SAQ-LQYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWA 355 (434)
Q Consensus 283 ~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd 355 (434)
......++|+|+++.++.+ +.++.|.+||+. .. ... ......+.........+.++ |++.++...++.|.+||
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 2456789999999877554 557899999975 22 111 01111122223345566665 56666665678899999
Q ss_pred ccCCCceeeEEEeeccccceeEEEEe-ec
Q 046226 356 REQDGRHTMLAVLVGHRGPIRCAIAF-LG 383 (434)
Q Consensus 356 ~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 383 (434)
. ++ +.+..+..+...+++++|. ++
T Consensus 258 ~-~g---~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 258 T-DG---NHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp T-TC---CEEEEEECSCSBEEEEEEESTT
T ss_pred C-CC---CEEEEEECCCCCcEEEEEecCC
Confidence 8 34 4555666666779999998 76
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=3e-09 Score=103.76 Aligned_cols=298 Identities=13% Similarity=0.068 Sum_probs=178.7
Q ss_pred EEEcCCEEEEEeCCCeEEEecCCCceeEeeccCC-C----ccE-EEEEEeCCEEEEEEc------CCeEEEeecCCCCCc
Q 046226 98 IAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAK-T----SMV-VAMEVSHDRVYAAYG------DGKIRVWRSTWDNGV 165 (434)
Q Consensus 98 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~-~----~~v-~~l~~~~~~l~~~s~------dg~i~vwd~~~~~~~ 165 (434)
+++.+..|++++.|+.|..+|..+++.+..+..+ . ..+ .......+.+++++. ++.|+.+|..+++.+
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 4457788999999999999999999998887654 1 111 122234567777664 799999999999887
Q ss_pred eeeEeeeccCCCCceeE-EEecccccc---------CcCCCeEEEEEecCCCEEEEEecCC-------------------
Q 046226 166 KHVKLATIPKTGGAVRN-LIVGKDKMM---------KHMGPITSIAINVSDDTLYSASLDK------------------- 216 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~dg------------------- 216 (434)
..+...........+.. +......+. +.......+++++++.+++.+..++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 76654221100000000 000000000 1222334678889999999887664
Q ss_pred cEEEEEcCCCeeEEEccc--Cc-------cCeEEEEEcCCC----eEEEEeCCCeEEEEecccccCcceeEEEEE-----
Q 046226 217 TIKVWRIRDSKCIETIQA--HS-------EPINALVVADDG----VLYSASDDATVRVWRRYFYSENQLHTLILT----- 278 (434)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----- 278 (434)
.|..+|.++|+.+..++. |. .....+....+| .++.++.+|.|+++|... +.........
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t--G~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN--GKFISAKNFVPVNWA 361 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT--CCEEEEEESSCCSSE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC--CCEeccccccccCcc
Confidence 599999999999888764 21 112222222244 688889999999999872 2221111100
Q ss_pred --ecccccCe------------------------EEEEEecCCCEEEEEcC-----------------------------
Q 046226 279 --LTAKYSPV------------------------KTLTLTLDDGLLYGGCT----------------------------- 303 (434)
Q Consensus 279 --~~~~~~~v------------------------~~~~~~~~~~~l~~~~~----------------------------- 303 (434)
+.....++ ..++++|++.++++...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 00000001 25688998888887543
Q ss_pred --------------CCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEee
Q 046226 304 --------------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 304 --------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
.|.|..||+.+.+...+......... ..+...+..++.++.||.+++||..++ +.+..+.
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~---g~~~~~g~~v~~g~~dg~l~a~D~~tG---~~lw~~~ 515 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNG---GTLTTAGNVVFQGTADGRLVAYHAATG---EKLWEAP 515 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTC---CEEEEEE
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcC---cceEeCCCEEEEECCCCcEEEEECCCC---ceeeeee
Confidence 27899999877665554421111111 224456788888999999999999998 6666665
Q ss_pred cccc-ceeEEEEeecccCCCCCCccc-EEEEeec----------------CCeEEEEecCC
Q 046226 370 GHRG-PIRCAIAFLGRFGEETEDEYC-TICTGSL----------------DGVLKMWRVTR 412 (434)
Q Consensus 370 ~h~~-~v~~~~~~~~~~~~~~~~~~~-~l~s~~~----------------Dg~v~iw~~~~ 412 (434)
...+ ...-+.+..+ |+ +++..+. .+.+..|.+..
T Consensus 516 ~~~~~~~~p~~y~~~---------G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 516 TGTGVVAAPSTYMVD---------GRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp CSSCCCSCCEEEEET---------TEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCCCcccCCEEEEeC---------CEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 4332 2233555566 54 4444322 46888888873
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.27 E-value=5.2e-09 Score=102.32 Aligned_cols=278 Identities=15% Similarity=0.114 Sum_probs=164.5
Q ss_pred EEEcCCEEEEEeCCCeEEEecCCCceeEeeccCC--Cc---cEE-EEEEeCCEEEEEEc------CCeEEEeecCCCCCc
Q 046226 98 IAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAK--TS---MVV-AMEVSHDRVYAAYG------DGKIRVWRSTWDNGV 165 (434)
Q Consensus 98 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~--~~---~v~-~l~~~~~~l~~~s~------dg~i~vwd~~~~~~~ 165 (434)
+++.+..|++++.|+.|..+|..+++.+..+... .. .+. +-.+..+.+++++. +|.|..||..+++.+
T Consensus 117 ~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 117 VAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred cEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 3446778999999999999999999998776542 11 111 11223456666643 789999999999887
Q ss_pred eeeEeee-ccCCCCceeEEEecccccc--------CcCCCeEEEEEecCCCEEEEEecCCc-------------------
Q 046226 166 KHVKLAT-IPKTGGAVRNLIVGKDKMM--------KHMGPITSIAINVSDDTLYSASLDKT------------------- 217 (434)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg~------------------- 217 (434)
..+.... .+........+........ ++......+++.++..+++.+..++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 7664211 0000000000000000000 11222236788898999999887764
Q ss_pred EEEEEcCCCeeEEEccc--Cc-------cCeEEEEEcCCC----eEEEEeCCCeEEEEecccccCcceeEEE-------E
Q 046226 218 IKVWRIRDSKCIETIQA--HS-------EPINALVVADDG----VLYSASDDATVRVWRRYFYSENQLHTLI-------L 277 (434)
Q Consensus 218 i~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~ 277 (434)
|..+|.++|+.+..++. |. ..........++ .++.++.+|.++++|.... ....... .
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~w~~ 354 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG--ELLSAKGIVPQSWTK 354 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEEESSCCSSEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC--CEecccccccccccc
Confidence 99999999999988764 21 111112222244 5888899999999998622 1111000 0
Q ss_pred Ee-----------------cccc-----------cCeEEEEEecCCCEEEEEcC--------------------------
Q 046226 278 TL-----------------TAKY-----------SPVKTLTLTLDDGLLYGGCT-------------------------- 303 (434)
Q Consensus 278 ~~-----------------~~~~-----------~~v~~~~~~~~~~~l~~~~~-------------------------- 303 (434)
.. .... ..-..++++|+..++++...
T Consensus 355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 00 0000 01123688888888777532
Q ss_pred -------------------CCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceee
Q 046226 304 -------------------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTM 364 (434)
Q Consensus 304 -------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 364 (434)
+|.|..||+.+.+...+......... -.+...+.+++.|+.||.++.||.+++ +.
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagglvf~gt~dg~l~a~D~~tG---~~ 508 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNG---GTLSTAGNLVFEGSADGRVIAYAADTG---EK 508 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTC---CE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccC---ccceECCCEEEEECCCCcEEEEECCCC---cc
Confidence 37788999877665554322111110 134456889999999999999999998 66
Q ss_pred EEEeeccccce-eEEEEeec
Q 046226 365 LAVLVGHRGPI-RCAIAFLG 383 (434)
Q Consensus 365 ~~~~~~h~~~v-~~~~~~~~ 383 (434)
+..++...+.+ .-+.+..+
T Consensus 509 lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 509 LWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEECSSCCCSCCEEEEET
T ss_pred ceeeeCCCCcccCceEEEEC
Confidence 66665443322 33666666
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.25 E-value=2.7e-09 Score=93.85 Aligned_cols=227 Identities=11% Similarity=0.032 Sum_probs=136.0
Q ss_pred eccCCCccEEEEEEeCC---EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe
Q 046226 127 RLKAKTSMVVAMEVSHD---RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN 203 (434)
Q Consensus 127 ~~~~~~~~v~~l~~~~~---~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 203 (434)
.+...........|+++ .+++...++.|..|+.. +. ...+. .+...+..++++
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~----------------------~~~~~~~gl~~d 94 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLL----------------------DATAFTNGNAVD 94 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEE----------------------ESCSCEEEEEEC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEe----------------------CCCCccceeeEC
Confidence 33344455678889886 35555668899999863 22 22221 245568899999
Q ss_pred cCCCEEEEEecCCcEEEEEcCCCeeEEEccc----CccCeEEEEEcCCC-eEEE----EeC-------------CCeEEE
Q 046226 204 VSDDTLYSASLDKTIKVWRIRDSKCIETIQA----HSEPINALVVADDG-VLYS----ASD-------------DATVRV 261 (434)
Q Consensus 204 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~-~l~s----~~~-------------dg~i~i 261 (434)
++|+++++...++.|.+||.. ++....... ....+.++++.++| ++++ |.. .+.|..
T Consensus 95 ~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 95 AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 999976665556789999986 553222111 12346789999999 4444 332 245666
Q ss_pred EecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC------CeEEEEEcCccccc-ccccCcccCcccceEE
Q 046226 262 WRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD------GYIHYWHKGWFSAQ-LQYGGALQGHTHAVMC 334 (434)
Q Consensus 262 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~-~~~~~~~~~~~~~v~~ 334 (434)
||.. .. ...... .......++|+|+++.|+++... +.|.+||+...... ....... .......
T Consensus 174 ~d~~--~g-~~~~~~-----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdg 243 (305)
T 3dr2_A 174 LPPD--GS-PLQRMA-----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDG 243 (305)
T ss_dssp ECSS--SC-CCEEEE-----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCS
T ss_pred EcCC--CC-cEEEEe-----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCe
Confidence 6653 11 111111 23456789999999988877665 78999997533200 0000000 1112233
Q ss_pred EEe--eCCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCe
Q 046226 335 LAS--VANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGV 404 (434)
Q Consensus 335 ~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~ 404 (434)
+.+ +|+ |.+++.+ .|.+|+.. + +.+..+..+. .+.+++|.++ ++.|..++.++.
T Consensus 244 i~~d~~G~-lwv~~~~-gv~~~~~~-g---~~~~~~~~~~-~~~~~~f~~d---------~~~L~it~~~~l 299 (305)
T 3dr2_A 244 FCVDRGGW-LWSSSGT-GVCVFDSD-G---QLLGHIPTPG-TASNCTFDQA---------QQRLFITGGPCL 299 (305)
T ss_dssp EEECTTSC-EEECCSS-EEEEECTT-S---CEEEEEECSS-CCCEEEECTT---------SCEEEEEETTEE
T ss_pred EEECCCCC-EEEecCC-cEEEECCC-C---CEEEEEECCC-ceeEEEEeCC---------CCEEEEEcCCeE
Confidence 444 466 4445544 49999985 3 4455555444 5888999877 667777766643
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.24 E-value=5.4e-09 Score=91.92 Aligned_cols=229 Identities=8% Similarity=0.003 Sum_probs=139.5
Q ss_pred EeeccccEEEEEE--cCC-EEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEc-CCeEEEeecCCC
Q 046226 88 VLKKDGQILCIAV--GNG-FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYG-DGKIRVWRSTWD 162 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~~~ 162 (434)
+..+........| +++ +++++..++.|..|+. +++ ...+..+...+..++++++ .++++.. ++.|.+|+.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 3344555677888 666 7788888899999997 444 3444455677899999987 5666654 5789999875 2
Q ss_pred CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE----Eec-------------CCcEEEEEcCC
Q 046226 163 NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS----ASL-------------DKTIKVWRIRD 225 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~vwd~~~ 225 (434)
. ...+.... . ......+.++++.++|+++++ |.. .+.|..||..+
T Consensus 117 ~-~~~~~~~~-~----------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 117 Q-AHLLVGRY-A----------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp C-EEEEECEE-T----------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred C-EEEEEecc-C----------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 2 22111000 0 012245778999999998886 432 25688888766
Q ss_pred CeeEEEcccCccCeEEEEEcCCC-eEEEEeCC------CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEE
Q 046226 226 SKCIETIQAHSEPINALVVADDG-VLYSASDD------ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLL 298 (434)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 298 (434)
++..... .......++|+|++ .|+.+... +.|.+||+.... .................++++++|+ |
T Consensus 179 g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~~~~pdgi~~d~~G~-l 252 (305)
T 3dr2_A 179 SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVPDGLPDGFCVDRGGW-L 252 (305)
T ss_dssp CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCSSSCCCSEEECTTSC-E
T ss_pred CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECCCCCCCeEEECCCCC-E
Confidence 6644333 34566889999999 56666554 789999876211 1111111111234456789999998 5
Q ss_pred EEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEe--eCCEEEEecCCCc
Q 046226 299 YGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VANYVISGSADST 350 (434)
Q Consensus 299 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 350 (434)
++++.+ .|.+||.... ... .+..+. .+.+++| +++.|+.++.++.
T Consensus 253 wv~~~~-gv~~~~~~g~-~~~----~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 253 WSSSGT-GVCVFDSDGQ-LLG----HIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EECCSS-EEEEECTTSC-EEE----EEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred EEecCC-cEEEECCCCC-EEE----EEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 555544 4999986422 111 111222 3556666 4567777766543
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=2.7e-08 Score=88.29 Aligned_cols=215 Identities=8% Similarity=-0.058 Sum_probs=132.7
Q ss_pred EEEEEE--c-CCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEe
Q 046226 95 ILCIAV--G-NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 95 v~~~~~--~-~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~ 170 (434)
..+.+| + +.+++++..++.|.+||..+++... +. ....+.+++++++ .+++++.+ .|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~-- 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHA-- 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEE--
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEe--
Confidence 456677 3 5677777788999999998775432 22 3457999999887 66666654 4889997655422111
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec------CCcEEEEEcCCCeeEEEcccCccCeEEEEE
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL------DKTIKVWRIRDSKCIETIQAHSEPINALVV 244 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 244 (434)
.... ......+.+++++++|+++++... .+.|..+| +++.. .+..+......++|
T Consensus 126 -~~~~---------------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~ 186 (326)
T 2ghs_A 126 -ELES---------------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICF 186 (326)
T ss_dssp -CSST---------------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEE
T ss_pred -eCCC---------------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEE
Confidence 0000 012245889999999987665432 24566666 45433 33333445778999
Q ss_pred cCCC-eE-EEEeCCCeEEEEecccccC-c-ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc
Q 046226 245 ADDG-VL-YSASDDATVRVWRRYFYSE-N-QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ 320 (434)
Q Consensus 245 ~~~~-~l-~s~~~dg~i~iwd~~~~~~-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 320 (434)
++++ .+ ++...++.|.+||+....+ . ........+......+..++++++|++.++...++.|.+||... ...
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g-~~~-- 263 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG-NHI-- 263 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC-CEE--
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC-CEE--
Confidence 9999 44 4455678999999751111 1 11122222333334567899999998777776778999998632 111
Q ss_pred ccCcccCcccceEEEEee
Q 046226 321 YGGALQGHTHAVMCLASV 338 (434)
Q Consensus 321 ~~~~~~~~~~~v~~~~~~ 338 (434)
..+..+...+.+++|.
T Consensus 264 --~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 264 --ARYEVPGKQTTCPAFI 279 (326)
T ss_dssp --EEEECSCSBEEEEEEE
T ss_pred --EEEECCCCCcEEEEEe
Confidence 1222344467888876
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.22 E-value=7.9e-08 Score=86.70 Aligned_cols=245 Identities=7% Similarity=-0.062 Sum_probs=150.0
Q ss_pred ceeeeEEEeeccccEEEEEE--cCCEEEEEe----------CCCeEEEecCCCceeEeeccCC-------CccEEEEEEe
Q 046226 81 SYRCISSVLKKDGQILCIAV--GNGFIYTGS----------DSNVIRIWKQPEFTECGRLKAK-------TSMVVAMEVS 141 (434)
Q Consensus 81 ~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~l~~~ 141 (434)
+++.+.++.....+ .+++ +|++|+++. .++.|.+||..+.+.+.++... ...-..++++
T Consensus 56 t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s 133 (373)
T 2mad_H 56 SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANT 133 (373)
T ss_pred CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEEC
Confidence 34445555433344 7777 899999886 3678999999998887776432 1234578999
Q ss_pred CC--EEEEEEc--CCeEEEeecCCCCCcee-eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC-CEEEEEecC
Q 046226 142 HD--RVYAAYG--DGKIRVWRSTWDNGVKH-VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLD 215 (434)
Q Consensus 142 ~~--~l~~~s~--dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d 215 (434)
|+ +|+++.. ++.|.++| .+++.+.. +. ... ++.+.+++ +.+++.+.|
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-----------------------~~~---~~~~~~~~~~~~~~~~~d 186 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-----------------------SPT---CYHIHPGAPSTFYLLCAQ 186 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-----------------------CCc---eEEEEeCCCceEEEEcCC
Confidence 97 7777764 58899999 87765444 31 111 23445554 455667789
Q ss_pred CcEEEEEcCCCeeEEEcc-----cCccCe-EEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecc-------
Q 046226 216 KTIKVWRIRDSKCIETIQ-----AHSEPI-NALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTA------- 281 (434)
Q Consensus 216 g~i~vwd~~~~~~~~~~~-----~~~~~v-~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~------- 281 (434)
|.+.++|. +++.+.... ....++ ....+.+++ .++..+.++.+.+.|+..... .....+..
T Consensus 187 g~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~----~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 187 GGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA----TNKAPIDALSGGRKA 261 (373)
T ss_pred CCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc----eEeeeeeecCCcccc
Confidence 99999999 877663322 111121 223445554 444444678899998752111 11111110
Q ss_pred ---cccCeEEEEEecCCCEEEEEcC----------CCeEEEEEcCcccccccccCcccCcccceEEEEe--eCC-EEEEe
Q 046226 282 ---KYSPVKTLTLTLDDGLLYGGCT----------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VAN-YVISG 345 (434)
Q Consensus 282 ---~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~ 345 (434)
.......+.++++++.++++.. ++.|.++|+.+.+....+ .. ++ ...++.+ +|+ +++++
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i--~~-g~--~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI--SL-GH--DVDAISVAQDGGPDLYAL 336 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE--EC-CC--CcCeEEECCCCCeEEEEE
Confidence 1123445788999998888653 357999998755443332 11 22 2445555 577 77777
Q ss_pred c-CCCcEEEEeccCCCceeeEEE
Q 046226 346 S-ADSTSRVWAREQDGRHTMLAV 367 (434)
Q Consensus 346 ~-~dg~i~iwd~~~~~~~~~~~~ 367 (434)
. .++.|.+||+.++ +.+..
T Consensus 337 ~~~~~~V~ViD~~t~---~vv~~ 356 (373)
T 2mad_H 337 SAGTEVLHIYDAGAG---DQDQS 356 (373)
T ss_pred cCCCCeEEEEECCCC---CEEee
Confidence 6 5899999999987 44444
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.22 E-value=2e-09 Score=105.81 Aligned_cols=240 Identities=12% Similarity=0.062 Sum_probs=142.3
Q ss_pred CCCccEEEEEEeCC--EEEEE-Ec----CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE
Q 046226 130 AKTSMVVAMEVSHD--RVYAA-YG----DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI 202 (434)
Q Consensus 130 ~~~~~v~~l~~~~~--~l~~~-s~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 202 (434)
+|...+..++|+|| +++.+ +. +..|++||+.+++..... + +......++|
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~----------------------~~~k~~~~~W 182 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-L----------------------KDVKFSGISW 182 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-E----------------------EEEESCCCEE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-c----------------------CCceeccEEE
Confidence 35567888999998 45433 22 257999999877643221 0 1111356789
Q ss_pred ecCCCEEEEEecCC-------------cEEEEEcCCCe----eEEEccc-CccCeEEEEEcCCC-eE-EEEeC---CCeE
Q 046226 203 NVSDDTLYSASLDK-------------TIKVWRIRDSK----CIETIQA-HSEPINALVVADDG-VL-YSASD---DATV 259 (434)
Q Consensus 203 ~~~~~~l~s~~~dg-------------~i~vwd~~~~~----~~~~~~~-~~~~v~~~~~~~~~-~l-~s~~~---dg~i 259 (434)
+ |++.|+.+..+. .|++|++.++. .+..... |...+..+.++||+ +| ++... +..|
T Consensus 183 s-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 183 L-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp E-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred e-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 9 999999888774 39999998764 3333333 44567889999999 44 43332 3589
Q ss_pred EEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-C---CCeEEEEEcCcccccccccCcccCcccceEEE
Q 046226 260 RVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-T---DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL 335 (434)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 335 (434)
.++|+.... .... .+..+....... +++++..|+..+ . .+.|..+|+...... .. ..+..|...+..+
T Consensus 262 ~~~d~~~~~--~~~~---~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~-~~l~~~~~~~~~~ 333 (693)
T 3iuj_A 262 YVKDLSQEN--APLL---TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HW-RDLIPERQQVLTV 333 (693)
T ss_dssp EEEETTSTT--CCCE---EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GC-EEEECCCSSCEEE
T ss_pred EEEECCCCC--CceE---EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cc-EEEecCCCCEEEE
Confidence 999986221 1111 222333444444 566666555443 3 368999998754321 00 1222333333377
Q ss_pred EeeCCEEEEecC-CC--cEEEEeccCCCceeeEEEee-ccccceeEEEEeecccCCCCCCcccEEEEeecC----CeEEE
Q 046226 336 ASVANYVISGSA-DS--TSRVWAREQDGRHTMLAVLV-GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD----GVLKM 407 (434)
Q Consensus 336 ~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D----g~v~i 407 (434)
++++++|+.... ++ .|++|++..+ ....+. ...+.+..+.++++ +..|+....+ ++|+.
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~----~~~~l~~p~~~~~~~~~~~~d---------~~~l~~~~ss~~tP~~l~~ 400 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGK----RVREVALPGLGSVSGFNGKHD---------DPALYFGFENYAQPPTLYR 400 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSC----EEEEECCSSSSEEEECCCCTT---------CSCEEEEEECSSSCCEEEE
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCC----eeEEeecCCCceEEeeecCCC---------CCEEEEEecCCCCCCEEEE
Confidence 788887766654 44 6889998753 223332 23445666666666 4544444333 88999
Q ss_pred EecCCCC
Q 046226 408 WRVTRPK 414 (434)
Q Consensus 408 w~~~~~~ 414 (434)
||+.+++
T Consensus 401 ~d~~~g~ 407 (693)
T 3iuj_A 401 FEPKSGA 407 (693)
T ss_dssp ECTTTCC
T ss_pred EECCCCe
Confidence 9987765
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=5.2e-09 Score=93.42 Aligned_cols=267 Identities=10% Similarity=0.008 Sum_probs=159.2
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEe----------CCCeEEEecCCCceeEeeccCCC-------ccEEEEEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGS----------DSNVIRIWKQPEFTECGRLKAKT-------SMVVAMEV 140 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~~~-------~~v~~l~~ 140 (434)
.+++.+.++..-..+ . +++ +|++|+++. .++.|.+||..+++.+.++.... ..-..+++
T Consensus 67 ~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 67 EAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 144 (386)
T ss_dssp TTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE
T ss_pred CCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE
Confidence 345666666554555 3 777 888888775 36789999999999888875321 23456889
Q ss_pred eCC--EEEEEEc--CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCC
Q 046226 141 SHD--RVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDK 216 (434)
Q Consensus 141 ~~~--~l~~~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 216 (434)
+|+ +++++.. ++.|.++|+.+.+.+..+.+. + + ...+....+.+++.+.||
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-----------------------g-~-~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-----------------------D-C-YHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----------------------S-E-EEEEEEETTEEEEEETTS
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-----------------------C-c-ceeecCCCceeEEECCCC
Confidence 997 6777764 689999999988776666321 0 1 112222345666777788
Q ss_pred cEEEEEcCC-CeeEEEcccC----ccCeE-EEEE-cCCCeEEEEeCCCeEEEEecccccCcceeEEEEEec-------cc
Q 046226 217 TIKVWRIRD-SKCIETIQAH----SEPIN-ALVV-ADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLT-------AK 282 (434)
Q Consensus 217 ~i~vwd~~~-~~~~~~~~~~----~~~v~-~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~ 282 (434)
.+.+.++.+ ++.......+ ..++. ...| .++|.++..+.+|.|.+.|+.......... ...+. ..
T Consensus 200 ~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~-~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 200 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA-VEALTEAERADGWR 278 (386)
T ss_dssp CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCC-EESSCHHHHHTTEE
T ss_pred CEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecc-eecccccccccccc
Confidence 888888765 4543211111 12221 2345 367755557778999999986211101111 10000 01
Q ss_pred ccCeEEEEEecCCCEEEEEcC----------CCeEEEEEcCcccccccccCcccCcccceEEEEe--eCC-EEEE-ecCC
Q 046226 283 YSPVKTLTLTLDDGLLYGGCT----------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VAN-YVIS-GSAD 348 (434)
Q Consensus 283 ~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s-~~~d 348 (434)
......++++++++.+++... ...|.++|+.+.+....+. -++ .+..+.+ +++ +|++ ...+
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~---vg~--~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGH--EIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEE--EECEEEECSSSSCEEEEEETTT
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE---CCC--CcceEEECCCCCeEEEEEcCCC
Confidence 123445778999998888643 2579999987655433321 122 3445555 565 5555 4568
Q ss_pred CcEEEEeccCCCceeeEEEeeccccceeEEEEeec
Q 046226 349 STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLG 383 (434)
Q Consensus 349 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 383 (434)
+.|.++|..++ +.+..+..- +.-..+.+++|
T Consensus 354 ~~VsViD~~t~---k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 354 KTLYIHDAESG---EELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TEEEEEETTTC---CEEEEECCC-CSSCCEEEECC
T ss_pred CeEEEEECCCC---cEEEEecCC-CCCceeEECCc
Confidence 99999999988 555554332 22234455543
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.17 E-value=6.7e-10 Score=98.86 Aligned_cols=258 Identities=14% Similarity=0.071 Sum_probs=160.6
Q ss_pred EEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccC
Q 046226 98 IAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPK 175 (434)
Q Consensus 98 ~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 175 (434)
... .+..|+.++.++.|..|| .+++.......+...+.++...++ .+++++.+ |..+|. +++.......
T Consensus 25 ~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~----- 95 (330)
T 3hxj_A 25 PILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT----- 95 (330)
T ss_dssp CEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----
T ss_pred ceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC-----
Confidence 344 466778888889999999 888887766655555677777655 66666655 777875 3333332211
Q ss_pred CCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeC
Q 046226 176 TGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASD 255 (434)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 255 (434)
.........+. +..++.++.++.|..+|.. ++.......+...+.++...+++.++.++.
T Consensus 96 -----------------~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~ 155 (330)
T 3hxj_A 96 -----------------KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSN 155 (330)
T ss_dssp ----------------------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECT
T ss_pred -----------------CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcC
Confidence 11111122222 5678888889999999998 777777766666677777877887888888
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEE
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL 335 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 335 (434)
++.|..+|.. .. ...........+.++...+++.+. .++ +.|..|| ......... ......+.++
T Consensus 156 ~~~l~~~d~~---g~----~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~----~~~~~~~~~~ 220 (330)
T 3hxj_A 156 DNYLYAINPD---GT----EKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNF----YAGYWTVTRP 220 (330)
T ss_dssp TSEEEEECTT---SC----EEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEE----CCSSCCCSCC
T ss_pred CCEEEEECCC---CC----EeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEE----ccCCcceece
Confidence 8999999865 11 111222233456667777777644 444 7789998 433222222 1222345666
Q ss_pred EeeCC-EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 336 ASVAN-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 336 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
..+++ .|..++.++.|..+|. ++ ..+..+......+..+.+.++ ..|..++.+|.|..+|. +++
T Consensus 221 ~~~~~g~l~v~t~~~gl~~~~~-~g---~~~~~~~~~~~~~~~~~~~~~----------g~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 221 AISEDGTIYVTSLDGHLYAINP-DG---TEKWRFKTGKRIESSPVIGNT----------DTIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp EECTTSCEEEEETTTEEEEECT-TS---CEEEEEECSSCCCSCCEECTT----------SCEEEECTTCEEEEECT-TSC
T ss_pred EECCCCeEEEEcCCCeEEEECC-CC---CEeEEeeCCCCccccceEcCC----------CeEEEecCCCCEEEECC-CCc
Confidence 66644 6777777888888874 33 333444443333444444433 35777888888999885 444
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.14 E-value=5.6e-09 Score=102.68 Aligned_cols=203 Identities=13% Similarity=0.071 Sum_probs=126.1
Q ss_pred CcCCCeEEEEEecCCCEEEEE-----ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCC--------
Q 046226 192 KHMGPITSIAINVSDDTLYSA-----SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDA-------- 257 (434)
Q Consensus 192 ~~~~~v~~~~~~~~~~~l~s~-----~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg-------- 257 (434)
++...+..++|+|||++|+.+ +....|++||+.+++.+... .+......++|+ |+ .|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 355678899999999998843 33357999999999865431 111113577899 88 677776663
Q ss_pred -----eEEEEecccccCcceeEEEEEecc-cccCeEEEEEecCCCEEEEEcC----CCeEEEEEcCcccccccccCcccC
Q 046226 258 -----TVRVWRRYFYSENQLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGCT----DGYIHYWHKGWFSAQLQYGGALQG 327 (434)
Q Consensus 258 -----~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~ 327 (434)
.|++|++.. .......+..... +......+.++|||++|+.... +..|+++|+......... +..
T Consensus 204 ~~~~~~v~~~~lgt--~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~---l~~ 278 (693)
T 3iuj_A 204 RTDQHKVYFHRLGT--AQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT---VQG 278 (693)
T ss_dssp -CCCCEEEEEETTS--CGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE---EEC
T ss_pred cCCCcEEEEEECCC--CcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE---EeC
Confidence 488898762 2222233444333 4455788999999998865432 358999998654322221 222
Q ss_pred cccceEE-EEeeCCEEEEec-CC---CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEee-c
Q 046226 328 HTHAVMC-LASVANYVISGS-AD---STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGS-L 401 (434)
Q Consensus 328 ~~~~v~~-~~~~~~~l~s~~-~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~ 401 (434)
+...... +..+++.|+..+ .+ +.|..+|+.++.. .....+..|...+. .|+++ ++.|+... .
T Consensus 279 ~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~--~~s~~---------g~~lv~~~~~ 346 (693)
T 3iuj_A 279 DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPERQQVL--TVHSG---------SGYLFAEYMV 346 (693)
T ss_dssp SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCE--EEEEE---------TTEEEEEEEE
T ss_pred CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCCCCEE--EEEEE---------CCEEEEEEEE
Confidence 3333322 455666544433 33 6799999987632 11234556666655 78888 66665554 4
Q ss_pred CC--eEEEEecCCC
Q 046226 402 DG--VLKMWRVTRP 413 (434)
Q Consensus 402 Dg--~v~iw~~~~~ 413 (434)
|| .|++|++..+
T Consensus 347 ~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 347 DATARVEQFDYEGK 360 (693)
T ss_dssp TTEEEEEEECTTSC
T ss_pred CCeeEEEEEECCCC
Confidence 54 6888988743
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.12 E-value=3.3e-11 Score=108.96 Aligned_cols=187 Identities=12% Similarity=0.107 Sum_probs=102.9
Q ss_pred EeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEE
Q 046226 140 VSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIK 219 (434)
Q Consensus 140 ~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 219 (434)
...+.+++++.||.|..||..+++....... +.+.+..+..++..+++++.||.|+
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~------------------------~~~~s~p~~~~g~~~v~~s~dg~l~ 62 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE------------------------DPVLQVPTHVEEPAFLPDPNDGSLY 62 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC------------------------CCSCCCC-----CCEEECTTTCCEE
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC------------------------CCceecceEcCCCEEEEeCCCCEEE
Confidence 3456888899999999999888877666531 2233333445677788888999999
Q ss_pred EEEcCCCeeEEEcccCcc-CeE-EEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCE
Q 046226 220 VWRIRDSKCIETIQAHSE-PIN-ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGL 297 (434)
Q Consensus 220 vwd~~~~~~~~~~~~~~~-~v~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 297 (434)
.||.++++.+..+..+.. .+. +..+..++.+++++.|+.|+.||.... . ....+..+. ...++|++..
T Consensus 63 a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG--~----~~w~~~~~~----~~~~~p~~~~ 132 (369)
T 2hz6_A 63 TLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTG--E----KQQTLSSAF----ADSLSPSTSL 132 (369)
T ss_dssp EC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------
T ss_pred EEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCC--c----EEEEecCCC----cccccccCCE
Confidence 999999988777654321 111 111123457888889999999998722 1 121222111 1345668889
Q ss_pred EEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC-----CEEEEecCCCcEEEEeccCCCceeeEEEee
Q 046226 298 LYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA-----NYVISGSADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 298 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
+++++.|+.|+.||.++.+...... ... .....+++ ..+++++.||.|+.||..++ +.+..+.
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~W~~~--~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG---~~~W~~~ 200 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELRWNAT--YFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG---DVLWIQN 200 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCCCEEE--EEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC---CEEEEEE
T ss_pred EEEEecCCEEEEEECCCCCEEEeEe--ccc----ccCccccCCccccceEEEECCCCEEEEEECCCC---cEEEEec
Confidence 9999999999999987665444321 111 11122233 56777889999999999988 4444444
No 231
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=2.9e-08 Score=96.79 Aligned_cols=194 Identities=11% Similarity=0.109 Sum_probs=121.4
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCcc-----------EEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeE
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSM-----------VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVK 169 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-----------v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~ 169 (434)
.+..|++++.++.|..+|..+++.+.++...... -..+.+..+.+++++.|+.|..+|..+++.+....
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 5777888888999999999999998877543211 12345566789999999999999999988877664
Q ss_pred eeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec------CCcEEEEEcCCCeeEEEcccCc-------
Q 046226 170 LATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL------DKTIKVWRIRDSKCIETIQAHS------- 236 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~------- 236 (434)
....... ......++ + .+..++++.. +|.|..+|.++|+.+..+....
T Consensus 145 ~~~~~~~-------------~~~~~~P~----v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 205 (668)
T 1kv9_A 145 TTDPAKP-------------YSITGAPR----V--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPY 205 (668)
T ss_dssp CSCTTSS-------------CBCCSCCE----E--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred cCCCCCc-------------ceecCCCE----E--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccc
Confidence 3210000 00011111 1 1345555543 5899999999999988775310
Q ss_pred ------------------------cCeEEEEEcCCC-eEEEEeCCCe-------------------EEEEecccccCcce
Q 046226 237 ------------------------EPINALVVADDG-VLYSASDDAT-------------------VRVWRRYFYSENQL 272 (434)
Q Consensus 237 ------------------------~~v~~~~~~~~~-~l~s~~~dg~-------------------i~iwd~~~~~~~~~ 272 (434)
.....+++.++. +++.+..++. |..+|.. ++...
T Consensus 206 ~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~--tG~~~ 283 (668)
T 1kv9_A 206 EHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD--TGKLA 283 (668)
T ss_dssp SSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT--TCCEE
T ss_pred cccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC--CCcee
Confidence 011236777765 7777776663 8888876 22222
Q ss_pred eEEEEEecccc-------cCeEEEEEecCCC---EEEEEcCCCeEEEEEcCcccc
Q 046226 273 HTLILTLTAKY-------SPVKTLTLTLDDG---LLYGGCTDGYIHYWHKGWFSA 317 (434)
Q Consensus 273 ~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 317 (434)
... ....|. .+.....+..+|+ .++.++.+|.++++|..+.+.
T Consensus 284 W~~--~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 284 WHY--QVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEE--ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred eEe--ecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 221 221121 2233333334665 688999999999999876543
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=2.5e-11 Score=109.75 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=101.0
Q ss_pred CCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccc
Q 046226 205 SDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKY 283 (434)
Q Consensus 205 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 283 (434)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+..++ .+++++.||.|+.||..... .... ...+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~--~~w~----~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNE--GLTK----LPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----C--CSEE----CSCCH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCc--eeee----eeccC
Confidence 578899999999999999999999988876 455555555666 77777899999999986221 1111 11110
Q ss_pred -cCeE-EEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCc
Q 046226 284 -SPVK-TLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGR 361 (434)
Q Consensus 284 -~~v~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 361 (434)
..+. +..+. .+..+++++.++.|+.||..+.+....+. .+. . ..+..+++.+++++.|+.|+.||..+++
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~----~~~-~-~~~~p~~~~v~~~~~dg~v~a~d~~tG~- 151 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS----SAF-A-DSLSPSTSLLYLGRTEYTITMYDTKTRE- 151 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSS-
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec----CCC-c-ccccccCCEEEEEecCCEEEEEECCCCC-
Confidence 0000 00111 34567888889999999987665554432 121 1 1223367788999999999999999874
Q ss_pred eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 362 HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 362 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
.+..+..+. ....++..+. .. ...++.++.||.|+.||..+++..
T Consensus 152 --~~W~~~~~~--~~~~~~~~~~-----~~-~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 152 --LRWNATYFD--YAASLPEDDV-----DY-KMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp --CCCEEEEEE--ECCBCCCCCT-----TC-CCCEEEEETSCEEEEECTTTCCEE
T ss_pred --EEEeEeccc--ccCccccCCc-----cc-cceEEEECCCCEEEEEECCCCcEE
Confidence 222222111 1112222210 00 146778889999999999988754
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=9.8e-08 Score=85.87 Aligned_cols=189 Identities=15% Similarity=0.155 Sum_probs=124.1
Q ss_pred CCEE-EEEeCCCeEEEecCCCc----eeEeecc-------CCCccEEEEEEeCCE-EEEEEcC------CeEEEeecCCC
Q 046226 102 NGFI-YTGSDSNVIRIWKQPEF----TECGRLK-------AKTSMVVAMEVSHDR-VYAAYGD------GKIRVWRSTWD 162 (434)
Q Consensus 102 ~~~l-~tg~~dg~i~iwd~~~~----~~~~~~~-------~~~~~v~~l~~~~~~-l~~~s~d------g~i~vwd~~~~ 162 (434)
+++| +.|..++.|.|+|+.+. +....+. .....-..+...|+. ++++..+ |.|.++|..+.
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCC
Confidence 4544 55667889999998754 5555552 112244567778884 4444444 78999999888
Q ss_pred CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-------------------cCCcEEEEEc
Q 046226 163 NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-------------------LDKTIKVWRI 223 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------------------~dg~i~vwd~ 223 (434)
+.+..+.... +-..--..+.|+|+++.+++.. .+..|.+||+
T Consensus 175 ~v~~~~~~~~-------------------~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 175 EPLGKWEIDR-------------------GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp CEEEECCSBC-------------------TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred eEEEEEccCC-------------------CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 7776664211 0112234678899999888885 3689999999
Q ss_pred CCCeeEEEcccC--ccCeEEEEE--cCCC-eEE-EEe-----CCCeEEEEecccccCcceeEEEEE--eccc--------
Q 046226 224 RDSKCIETIQAH--SEPINALVV--ADDG-VLY-SAS-----DDATVRVWRRYFYSENQLHTLILT--LTAK-------- 282 (434)
Q Consensus 224 ~~~~~~~~~~~~--~~~v~~~~~--~~~~-~l~-s~~-----~dg~i~iwd~~~~~~~~~~~~~~~--~~~~-------- 282 (434)
.+++.+.++... ......+.| +|++ +++ ++- .+++|.+|.... + ....... +...
T Consensus 236 ~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g--~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 236 RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--G--KWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--T--EEEEEEEEEECCEECCSSCCG
T ss_pred CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--C--ceeEEEEEeCCCccccccccc
Confidence 999888887653 134455656 8998 444 444 677888877652 1 1111111 1110
Q ss_pred --------ccCeEEEEEecCCCEEEEEcC-CCeEEEEEcC
Q 046226 283 --------YSPVKTLTLTLDDGLLYGGCT-DGYIHYWHKG 313 (434)
Q Consensus 283 --------~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~ 313 (434)
......|.+++||++|+++.. .+.|.+||+.
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 245778999999999988765 6899999986
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=9.5e-07 Score=75.82 Aligned_cols=244 Identities=10% Similarity=0.031 Sum_probs=144.7
Q ss_pred CEEEEEeCCCeEEEecCCCceeE-----eeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCceeeEeeecc
Q 046226 103 GFIYTGSDSNVIRIWKQPEFTEC-----GRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIP 174 (434)
Q Consensus 103 ~~l~tg~~dg~i~iwd~~~~~~~-----~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~ 174 (434)
.+|+.+.. +.|+.+++...... ..+.........++++++ .|+.+. .++.|..++..........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~------ 74 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII------ 74 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE------
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE------
Confidence 45555553 47888887653321 111112345788999874 566555 4788999988654321111
Q ss_pred CCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-CeEEE
Q 046226 175 KTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYS 252 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s 252 (434)
.........+++.+++..|+.+ ...+.|.+++++.................+++.++ +.|+.
T Consensus 75 ----------------~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv 138 (267)
T 1npe_A 75 ----------------RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYW 138 (267)
T ss_dssp ----------------CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred ----------------ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEE
Confidence 0122457899999976666655 45678999998643322222222246689999995 55554
Q ss_pred EeC---CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcccCc
Q 046226 253 ASD---DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQGH 328 (434)
Q Consensus 253 ~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~ 328 (434)
+.. .+.|..+++. .... ... ..........+++++++..|+.+ ...+.|.++|+........ ...
T Consensus 139 ~~~~~~~~~I~~~~~d---g~~~-~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~----~~~- 207 (267)
T 1npe_A 139 TDWNRDNPKIETSHMD---GTNR-RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV----LEG- 207 (267)
T ss_dssp EECCSSSCEEEEEETT---SCCC-EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE----EEC-
T ss_pred EECCCCCcEEEEEecC---CCCc-EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE----ecC-
Confidence 443 4688888775 1111 111 11223467899999987766555 4568999999864322111 111
Q ss_pred ccceEEEEeeCCEEEEec-CCCcEEEEeccCCCceeeEEEeeccc-cceeEEEEeec
Q 046226 329 THAVMCLASVANYVISGS-ADSTSRVWAREQDGRHTMLAVLVGHR-GPIRCAIAFLG 383 (434)
Q Consensus 329 ~~~v~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~ 383 (434)
......++.+++.|+.+. ..+.|.++|..++ +.+..+.... .....+++.|+
T Consensus 208 ~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g---~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 208 LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS---KEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp CCSEEEEEEETTEEEEEETTTTEEEEEETTTT---EEEEEECCSSCCCCCCEEEECS
T ss_pred CCCceEEEEeCCEEEEEECCCCeEEEEeCCCC---CceEEEccccccccceeeecCc
Confidence 122356667766555544 5689999999887 5566654333 24677888887
No 235
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.03 E-value=2e-06 Score=86.10 Aligned_cols=290 Identities=11% Similarity=0.091 Sum_probs=171.9
Q ss_pred cccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccC-------CCccEEEEEEeCC-EEEEEEcCCeEEEeecCCC
Q 046226 92 DGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKA-------KTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWD 162 (434)
Q Consensus 92 ~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~ 162 (434)
...|.++.. ....|..|+.++-|.+||..+++....... ....|.++...++ .+.+|+.+ -|.+||....
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~ 292 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTD 292 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCC
Confidence 456888887 455677777655688899877654332211 2356999988876 78888876 5888886543
Q ss_pred CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc------cCc
Q 046226 163 NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ------AHS 236 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~~~ 236 (434)
.. ..+. ..+.. ...-....|.++...++|. |..|+.++-|..|+..+.+...-.. ...
T Consensus 293 ~~-~~~~--~~~~~------------~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~ 356 (795)
T 4a2l_A 293 SF-ASYS--SNPVE------------NGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSD 356 (795)
T ss_dssp EE-EEEC--CCTTS------------TTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSC
T ss_pred eE-EEEe--cCCCC------------CCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCC
Confidence 21 1110 00000 0001345799999888776 5667777779999876554222111 124
Q ss_pred cCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEe-----cccccCeEEEEEecCCCEEEEEcCCCeEEEEE
Q 046226 237 EPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTL-----TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWH 311 (434)
Q Consensus 237 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 311 (434)
..|.++...+++.|..|+.++-|..||... .......... ......|.++...++++.|.+|+.++-|.+||
T Consensus 357 ~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~---~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTNDGGLNLYNPIT---QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTSCEEEEESSSCEEEECTTT---CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEECCCCCEEEEECCCCeEEEcCCC---CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 569999998888888888887899998651 1111110000 11235788999988888677788877899999
Q ss_pred cCcccccccccCcccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEe----eccccceeEEEEeecccC
Q 046226 312 KGWFSAQLQYGGALQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVL----VGHRGPIRCAIAFLGRFG 386 (434)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~ 386 (434)
....................|.++..+. ..|..|+. +-+.+||..++. ....... .-....|.++...++
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~--- 508 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSH--- 508 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTT---
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe-EEEccccccccccCCceEEEEEECCC---
Confidence 7643221111000012335688888763 34555555 458889987651 1111110 112356888877766
Q ss_pred CCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 387 EETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 387 ~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
+.+.+ |+. +-|..|+..+++
T Consensus 509 ------g~lWi-gt~-~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 509 ------KRLWI-GGE-EGLSVFKQEGLD 528 (795)
T ss_dssp ------CCEEE-EES-SCEEEEEEETTE
T ss_pred ------CCEEE-EeC-CceEEEeCCCCe
Confidence 55444 444 457788876543
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.03 E-value=2.3e-07 Score=77.33 Aligned_cols=196 Identities=11% Similarity=0.074 Sum_probs=131.6
Q ss_pred ccceeeeEEEeecccc--EEEEEE-cCCEEEEEeCCC--eEEEecCCCceeEeeccCCCc-cEEEEEEeCCEEEEEEc-C
Q 046226 79 SSSYRCISSVLKKDGQ--ILCIAV-GNGFIYTGSDSN--VIRIWKQPEFTECGRLKAKTS-MVVAMEVSHDRVYAAYG-D 151 (434)
Q Consensus 79 ~~~~~~~~~~~~h~~~--v~~~~~-~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~l~~~s~-d 151 (434)
...++.+.++ .|+.. ...+.| ++.++.+.+.+| .|+++|+++++.+.++..... .-..+++..+.|+.+.. +
T Consensus 28 ~~~~~vv~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 28 IYDYQIVHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred ccceEEEEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC
Confidence 4567777777 56544 477888 665556666665 999999999999888765433 23457778887777765 8
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 231 (434)
+.+.+||..+.+.+..+... . ....+.++++.|+....++.|.++|..+.+.+..
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~-----------------------~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~ 161 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD-----------------------G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRT 161 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS-----------------------S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEE
T ss_pred CEEEEEECccCcEEEEEECC-----------------------C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEE
Confidence 99999999888877776421 1 1123335777787777688899999999988887
Q ss_pred cccCc-----cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEE-ec-------ccccCeEEEEEecCCCE
Q 046226 232 IQAHS-----EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILT-LT-------AKYSPVKTLTLTLDDGL 297 (434)
Q Consensus 232 ~~~~~-----~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~-------~~~~~v~~~~~~~~~~~ 297 (434)
+.... ..++.+.+. +| .++..-.+..|.+.|... +......... +. ......+.|+++|+++.
T Consensus 162 I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t--G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 162 ITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET--GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT--CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred EEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC--CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 76421 335567776 66 444444678899999761 1111111110 10 11235689999998887
Q ss_pred EEEEcC
Q 046226 298 LYGGCT 303 (434)
Q Consensus 298 l~~~~~ 303 (434)
|++.+.
T Consensus 239 lfVTGK 244 (262)
T 3nol_A 239 LFVTGK 244 (262)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 777664
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=4.6e-07 Score=76.53 Aligned_cols=204 Identities=8% Similarity=0.001 Sum_probs=137.8
Q ss_pred cceeeeEEEeeccc--cEEEEEEcC-CEEEEEe-C--CCeEEEecCCCceeEeeccCCC-ccEEEEEEeCCEEEEEEc-C
Q 046226 80 SSYRCISSVLKKDG--QILCIAVGN-GFIYTGS-D--SNVIRIWKQPEFTECGRLKAKT-SMVVAMEVSHDRVYAAYG-D 151 (434)
Q Consensus 80 ~~~~~~~~~~~h~~--~v~~~~~~~-~~l~tg~-~--dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~~~l~~~s~-d 151 (434)
.+++.+.++ .|.. ....+.|++ ..|+.++ . ++.|+++|+.+++.+..+.... .....+++..+.++.+.. +
T Consensus 7 ~~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~ 85 (266)
T 2iwa_A 7 YIVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC
T ss_pred cCceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC
Confidence 456677776 4554 367899922 4555553 2 5799999999999988865322 234567888887777766 7
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET 231 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 231 (434)
+.+.++|..+.+.+..+... ... ...+++|++.++++..++.|.++|.++.+.+..
T Consensus 86 ~~v~viD~~t~~v~~~i~~g----------------------~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQ----------------------MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp SEEEEEETTTTEEEEEEECC----------------------SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred CEEEEEECCCCcEEEEEECC----------------------CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 99999999877666655321 011 123556888888777789999999999888877
Q ss_pred cccCc-----cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEeccc-------------ccCeEEEEEe
Q 046226 232 IQAHS-----EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAK-------------YSPVKTLTLT 292 (434)
Q Consensus 232 ~~~~~-----~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~ 292 (434)
+.... ..++.+.+. ++ .++....++.|.+.|... .+....+... ......|+++
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t------g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD------GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT------CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCC------CcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 76422 246678888 67 444555678999999872 1222222111 1356899999
Q ss_pred cCCCEE-EEEcCCCeEEEEEcCcc
Q 046226 293 LDDGLL-YGGCTDGYIHYWHKGWF 315 (434)
Q Consensus 293 ~~~~~l-~~~~~dg~i~i~d~~~~ 315 (434)
|+++.+ +++...+.|...++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 987654 55567889999887543
No 238
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=1e-07 Score=86.60 Aligned_cols=249 Identities=10% Similarity=0.026 Sum_probs=152.2
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEe----------CCCeEEEecCCCceeEeeccCC-------CccEEEEEE
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGS----------DSNVIRIWKQPEFTECGRLKAK-------TSMVVAMEV 140 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~l~~ 140 (434)
.+++.+.++..-..+ .+++ ++++|+++. .++.|.++|..+++.+.++... ...-..+.+
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~ 184 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL 184 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE
T ss_pred CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE
Confidence 455566666554455 6777 888888876 4679999999999988876532 123456889
Q ss_pred eCC--EEEEEEc--CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC-CEEEEEecC
Q 046226 141 SHD--RVYAAYG--DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSASLD 215 (434)
Q Consensus 141 ~~~--~l~~~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d 215 (434)
+|+ +++++.. ++.|.+.|+.+.+.+..+.+. . +....|++ ..+++.+.|
T Consensus 185 spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~---------------------g-----~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 185 TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP---------------------D-----CYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---------------------S-----EEEEEEEETTEEEEEETT
T ss_pred cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC---------------------C-----ceeeccCCCcEEEEEcCC
Confidence 997 7777764 688999999888766665421 0 01222332 445556667
Q ss_pred CcEEEEEcCCCeeEEE----cccCccCe-EEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecc--------
Q 046226 216 KTIKVWRIRDSKCIET----IQAHSEPI-NALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTA-------- 281 (434)
Q Consensus 216 g~i~vwd~~~~~~~~~----~~~~~~~v-~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------- 281 (434)
|.+.+.+..+++.... +.....++ ..+.+.+++ .++.....+.|.+.|+.... ......+..
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~----~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG----ATFRAPIEALTEAERAD 314 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC----EEECCCEESSCTTTGGG
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc----eEEeeeeeecccccccc
Confidence 7777777655544321 21111221 234667777 55556678899999875111 111110000
Q ss_pred --cccCeEEEEEecCCCEEEEEcC----------CCeEEEEEcCcccccccccCcccCcccceEEEEe--eCC-EEEEec
Q 046226 282 --KYSPVKTLTLTLDDGLLYGGCT----------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VAN-YVISGS 346 (434)
Q Consensus 282 --~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~ 346 (434)
.......++++++++.+++... ++.|.++|+.+.+....+. . +. ....+.+ +++ ++++..
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~--v-g~--~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE--L-GH--EIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--E-EE--EECEEEECCSSSCEEEEEE
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE--C-CC--CcCeEEEccCCCEEEEEEc
Confidence 0112223689999988777642 3579999987654433321 1 11 2445555 577 777777
Q ss_pred -CCCcEEEEeccCCCceeeEEEe
Q 046226 347 -ADSTSRVWAREQDGRHTMLAVL 368 (434)
Q Consensus 347 -~dg~i~iwd~~~~~~~~~~~~~ 368 (434)
.++.|.++|+.+. +.+..+
T Consensus 390 ~~s~~VsVID~~t~---kvv~tI 409 (426)
T 3c75_H 390 AGTQTLHIYDAATG---EELRSV 409 (426)
T ss_dssp TTTTEEEEEETTTC---CEEEEE
T ss_pred CCCCeEEEEECCCC---CEEEEe
Confidence 5999999999998 556554
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=2.4e-07 Score=77.22 Aligned_cols=193 Identities=10% Similarity=0.086 Sum_probs=127.0
Q ss_pred cceeeeEEEeecccc--EEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCc-cEEEEEEeCCEEEEEEc-CCeE
Q 046226 80 SSYRCISSVLKKDGQ--ILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS-MVVAMEVSHDRVYAAYG-DGKI 154 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~--v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~l~~~s~-dg~i 154 (434)
...+.+.++ .|+.. ...+.| ++.+.++.+.+|.|+++|+++++.+..+ .... .-..+++..+.|+.+.. ++.+
T Consensus 41 ~~~~Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 41 RVAHIIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEE
T ss_pred cceEEEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEE
Confidence 344556665 56543 478888 5566667777889999999999988877 3222 23457888886666654 8999
Q ss_pred EEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEccc
Q 046226 155 RVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQA 234 (434)
Q Consensus 155 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 234 (434)
.+||..+.+.+..+.. ...-..++ ++++.|+.+..++.|.++|.++.+.+..+..
T Consensus 119 ~V~D~~Tl~~~~ti~~-----------------------~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 119 FTWSGMPPQRERTTRY-----------------------SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEETTTTEEEEEEEC-----------------------SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEECCcCcEEEEEeC-----------------------CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 9999988877776642 11112333 5678888877789999999999998887764
Q ss_pred Cc-----cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEE-e--------cccccCeEEEEEecCCCEEE
Q 046226 235 HS-----EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILT-L--------TAKYSPVKTLTLTLDDGLLY 299 (434)
Q Consensus 235 ~~-----~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~--------~~~~~~v~~~~~~~~~~~l~ 299 (434)
.. ..++.+.|. +| .++..-.+..|.+.|.. .+.-...+... + .....-.+.|+++|+++.|+
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~--TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA--TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT--TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC--CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 22 245677777 66 44444467889999986 22111111111 0 01223568999999766555
Q ss_pred EEc
Q 046226 300 GGC 302 (434)
Q Consensus 300 ~~~ 302 (434)
+.+
T Consensus 251 VTG 253 (268)
T 3nok_A 251 MTG 253 (268)
T ss_dssp EEE
T ss_pred EeC
Confidence 544
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.95 E-value=1.3e-06 Score=83.41 Aligned_cols=262 Identities=12% Similarity=0.012 Sum_probs=149.6
Q ss_pred EEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCc----cEE-EEEEeCCEEEEEEc------CCeEEEeecCCCCCce
Q 046226 98 IAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS----MVV-AMEVSHDRVYAAYG------DGKIRVWRSTWDNGVK 166 (434)
Q Consensus 98 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~----~v~-~l~~~~~~l~~~s~------dg~i~vwd~~~~~~~~ 166 (434)
++..+..|++++.|+.|..+|..+++.+........ .+. .-....+.+++++. ++.|..+|..+++.+.
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 345677888999999999999999998876543220 111 11234567777765 7999999999988877
Q ss_pred eeEeeecc-------CC--CCcee-EEEeccc-----cc-cCcCCCeEEEEEecCCCEEEEEecC---------------
Q 046226 167 HVKLATIP-------KT--GGAVR-NLIVGKD-----KM-MKHMGPITSIAINVSDDTLYSASLD--------------- 215 (434)
Q Consensus 167 ~~~~~~~~-------~~--~~~~~-~~~~~~~-----~~-~~~~~~v~~~~~~~~~~~l~s~~~d--------------- 215 (434)
........ .. ..... ....+.. .+ .+.......+++.++...++.+..+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 66532110 00 00000 0000000 00 0000111235666776777766532
Q ss_pred -CcEEEEEcCCCeeEEEcccCc----------cCeEEEEEcCCC----eEEEEeCCCeEEEEecccccCcceeEEEEEec
Q 046226 216 -KTIKVWRIRDSKCIETIQAHS----------EPINALVVADDG----VLYSASDDATVRVWRRYFYSENQLHTLILTLT 280 (434)
Q Consensus 216 -g~i~vwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 280 (434)
+.|..+|.++|+.+..++... .++. +....++ .++.++.+|.+.++|... +....... +.
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~t--G~~~w~~~--~~ 345 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNREN--GNLIVAEK--VD 345 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTT--CCEEEEEE--SS
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCC--CCEEeeec--cc
Confidence 359999999999988776321 1221 2222355 366788899999999762 22111111 00
Q ss_pred c-----------cccCe--------------------------EEEEEecCCCEEEEEc---------------------
Q 046226 281 A-----------KYSPV--------------------------KTLTLTLDDGLLYGGC--------------------- 302 (434)
Q Consensus 281 ~-----------~~~~v--------------------------~~~~~~~~~~~l~~~~--------------------- 302 (434)
. ...++ ..++++|+..++++..
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 0 00011 2467888777777653
Q ss_pred ----------------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEE
Q 046226 303 ----------------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLA 366 (434)
Q Consensus 303 ----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 366 (434)
.+|.|..||+.+.+...+......... ..+...+..++.++.||.|+.||.+++ +.+.
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~---~~~~t~gg~v~~g~~dg~l~a~D~~tG---~~lw 499 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTKGGLVWYATLDGYLKALDNKDG---KELW 499 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTC---CEEE
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc---eeEEECCCEEEEEcCCCeEEEEECCCC---CEEE
Confidence 347888888876655544321111111 122345778888999999999999998 5555
Q ss_pred Eeec
Q 046226 367 VLVG 370 (434)
Q Consensus 367 ~~~~ 370 (434)
.+..
T Consensus 500 ~~~~ 503 (571)
T 2ad6_A 500 NFKM 503 (571)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5543
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=9.3e-07 Score=86.20 Aligned_cols=265 Identities=15% Similarity=0.085 Sum_probs=156.3
Q ss_pred EEcCCEEEEEeCCCeEEEecCCCceeEeeccCCC----ccEE-EEEEeCCEEEEEEc------CCeEEEeecCCCCCcee
Q 046226 99 AVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKT----SMVV-AMEVSHDRVYAAYG------DGKIRVWRSTWDNGVKH 167 (434)
Q Consensus 99 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~----~~v~-~l~~~~~~l~~~s~------dg~i~vwd~~~~~~~~~ 167 (434)
++.+..|++++.|+.|..+|..+++.+..+.... ..+. .-.+..+.++++.. +|.|..+|..+++.+..
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4456788889999999999999999987765421 1111 11223556766654 58999999999988777
Q ss_pred eEeee-ccCCCCceeEEEeccccc--------cCcCCCeEEEEEecCCCEEEEEecCC-------------------cEE
Q 046226 168 VKLAT-IPKTGGAVRNLIVGKDKM--------MKHMGPITSIAINVSDDTLYSASLDK-------------------TIK 219 (434)
Q Consensus 168 ~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~s~~~dg-------------------~i~ 219 (434)
+.... .+........+......+ .++......+++.++..+++.+..++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 65321 010000000000000000 01222234578888888898887766 399
Q ss_pred EEEcCCCeeEEEccc--Cc-------cCeEEEEEcCCC----eEEEEeCCCeEEEEecccccCcceeEEE-------EEe
Q 046226 220 VWRIRDSKCIETIQA--HS-------EPINALVVADDG----VLYSASDDATVRVWRRYFYSENQLHTLI-------LTL 279 (434)
Q Consensus 220 vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~ 279 (434)
.+|.++|+.+..++. |. .+.....+..++ .++.++.+|.+.++|.... ....... ..+
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~w~~~~ 351 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG--KLISAEKFGKVTWAEKV 351 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEEESSCCCSEEEE
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC--CEecccccccccccccc
Confidence 999999999888764 22 222222222344 4888999999999997622 1111000 000
Q ss_pred ccc-cc------------------------CeEEEEEecCCCEEEEE---------------------------------
Q 046226 280 TAK-YS------------------------PVKTLTLTLDDGLLYGG--------------------------------- 301 (434)
Q Consensus 280 ~~~-~~------------------------~v~~~~~~~~~~~l~~~--------------------------------- 301 (434)
... .. .-..++++|+..++++.
T Consensus 352 d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 431 (668)
T 1kv9_A 352 DLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV 431 (668)
T ss_dssp CTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred ccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence 000 00 01126777776666542
Q ss_pred ---cCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeecc
Q 046226 302 ---CTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGH 371 (434)
Q Consensus 302 ---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h 371 (434)
..+|.|..||+.+.+...+...... ..-..+...+.+++.++.||.+++||.+++ +.+..+...
T Consensus 432 p~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG---~~l~~~~~~ 498 (668)
T 1kv9_A 432 PAAVVSGALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNLVFQGTAAGQMHAYSADKG---EALWQFEAQ 498 (668)
T ss_dssp CGGGCEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTC---CEEEEEECS
T ss_pred CCCCccceEEEEeCCCCcEEEEccCCCC---CcCceeEeCCCEEEEECCcccchhhhhhcC---hhheEecCC
Confidence 1347899999877665554321111 111234556889999999999999999998 555555543
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=9.9e-06 Score=81.04 Aligned_cols=282 Identities=9% Similarity=0.059 Sum_probs=167.6
Q ss_pred ccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeecc------CCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCC
Q 046226 93 GQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLK------AKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNG 164 (434)
Q Consensus 93 ~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~------~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~ 164 (434)
..|.++.. ....|..|+.++-|..|+..+........ .....|.++...++ .|.+|+.++-|..|+..++..
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCE
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcE
Confidence 56999988 45567788888888888865543221111 12456999988876 788899888899998764432
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc----cCccCeE
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ----AHSEPIN 240 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~v~ 240 (434)
. .+... .... ...-....|.++...++++.|..|+.++-|.+||..+++...-.. .....|.
T Consensus 390 ~-~~~~~---~~~~----------~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~ 455 (795)
T 4a2l_A 390 T-SYTLQ---EDES----------ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY 455 (795)
T ss_dssp E-EECCC-------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE
T ss_pred E-EEecC---CCCc----------ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE
Confidence 1 11000 0000 000124578999988888767778877789999998776433221 1345789
Q ss_pred EEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEe----cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccc
Q 046226 241 ALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTL----TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 241 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
++...+++.|..|+.+ -|.+||... ......... ......|.++...++|++.+.. . +-|..||.....
T Consensus 456 ~i~~d~~g~lwigt~~-Gl~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 456 AILPDGEGNLWLGTLS-ALVRFNPEQ----RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLD 528 (795)
T ss_dssp EEEECSSSCEEEEESS-CEEEEETTT----TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTE
T ss_pred EEEECCCCCEEEEecC-ceeEEeCCC----CeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCe
Confidence 9998888866666664 488888651 111111100 1123568899888888755544 4 458888865432
Q ss_pred cccccc---CcccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEeecc----ccceeEEEEeecccCCC
Q 046226 317 AQLQYG---GALQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLVGH----RGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 317 ~~~~~~---~~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~ 388 (434)
. .+. .........|.++..+. ..|..|+.+ -|..||..++ . +..+... ...|.++...++
T Consensus 529 ~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~---~-~~~~~~~~gl~~~~i~~i~~d~~----- 596 (795)
T 4a2l_A 529 I--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDK---Q-IKRYNTTNGLPNNVVYGILEDSF----- 596 (795)
T ss_dssp E--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTT---E-EEEECGGGTCSCSCEEEEEECTT-----
T ss_pred E--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCC---c-EEEeCCCCCCchhheEEEEECCC-----
Confidence 2 111 11112345688888763 244445544 5788887764 2 2222211 235777776665
Q ss_pred CCCcccEEEEeecCCeEEEEecCCC
Q 046226 389 TEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 389 ~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
|.+.+++ . +-|..|+..+.
T Consensus 597 ----g~lWi~t-~-~Gl~~~~~~~~ 615 (795)
T 4a2l_A 597 ----GRLWLST-N-RGISCFNPETE 615 (795)
T ss_dssp ----SCEEEEE-T-TEEEEEETTTT
T ss_pred ----CCEEEEc-C-CceEEEcCCCC
Confidence 6655544 3 45666776644
No 243
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.89 E-value=1.3e-06 Score=83.30 Aligned_cols=115 Identities=10% Similarity=0.053 Sum_probs=76.1
Q ss_pred cCCEEEEEeC-CCeEEEecC-CCceeEeeccCCCc-----------cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCcee
Q 046226 101 GNGFIYTGSD-SNVIRIWKQ-PEFTECGRLKAKTS-----------MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKH 167 (434)
Q Consensus 101 ~~~~l~tg~~-dg~i~iwd~-~~~~~~~~~~~~~~-----------~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~ 167 (434)
.+..|++++. ++.|..+|. .+++.+.++..... ....+++..+.+++++.|+.+..+|..+++.+..
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 4667777777 899999999 89998877653321 0123456677899999999999999998887766
Q ss_pred eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec------CCcEEEEEcCCCeeEEEccc
Q 046226 168 VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL------DKTIKVWRIRDSKCIETIQA 234 (434)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~ 234 (434)
......... ......++ + .+..+++++. ++.|..+|.++|+.+.++..
T Consensus 141 ~~~~~~~~~-------------~~~~~~P~----v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 141 VEVCDPKVG-------------STLTQAPF----V--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EECCCGGGT-------------CBCCSCCE----E--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCCCCcc-------------ceeccCCE----E--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 543211000 00011111 1 1345565554 78999999999998887653
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=1e-06 Score=74.34 Aligned_cols=200 Identities=12% Similarity=0.018 Sum_probs=127.1
Q ss_pred CeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEEcccCc-cCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcce
Q 046226 196 PITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIETIQAHS-EPINALVVADDGVLYSASDDATVRVWRRYFYSENQL 272 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 272 (434)
....+.|++++.++++.+. ++.|.++|+.+++.+..+.... .....+++..+..+++.-.++.+.++|.. .
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~------t 95 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR------T 95 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT------T
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC------C
Confidence 3578999998644444432 5799999999999988875322 23345666643355566678999999986 2
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCc-ccceEEEEeeCC-EEEEecCCCc
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGH-THAVMCLASVAN-YVISGSADST 350 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~s~~~dg~ 350 (434)
.+.+..+...... ...+++|++.++++..++.|.++|..+.+......-...+. ...+..+.+.+. .++....++.
T Consensus 96 ~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 96 LSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDC 173 (266)
T ss_dssp TEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSE
T ss_pred CcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCe
Confidence 2222333221111 23456688888887788999999987554333221111111 112445555444 4444556789
Q ss_pred EEEEeccCCCceeeEEEeecc-------------ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 351 SRVWAREQDGRHTMLAVLVGH-------------RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 351 i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
|.+.|..++ +.+..+.-. ......++++|+. ..+++++...+.|..-++....
T Consensus 174 V~vID~~tg---~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~--------~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 174 IARISAKDG---TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN--------KRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTTC---CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT--------TEEEEEETTCSEEEEEEEEECC
T ss_pred EEEEECCCC---cEEEEEECCCcccccccccccccCceEEEEEcCCC--------CEEEEECCCCCeEEEEEEeccc
Confidence 999999998 445544321 1245789999984 5678888889999999987654
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=6e-06 Score=78.86 Aligned_cols=257 Identities=13% Similarity=0.038 Sum_probs=144.6
Q ss_pred EEEEeCCCeEEEecCCCceeEeeccCCCc----cEE-EEEEeCCEEEEEEc------CCeEEEeecCCCCCceeeEeeec
Q 046226 105 IYTGSDSNVIRIWKQPEFTECGRLKAKTS----MVV-AMEVSHDRVYAAYG------DGKIRVWRSTWDNGVKHVKLATI 173 (434)
Q Consensus 105 l~tg~~dg~i~iwd~~~~~~~~~~~~~~~----~v~-~l~~~~~~l~~~s~------dg~i~vwd~~~~~~~~~~~~~~~ 173 (434)
|++++.|+.|..+|..+++.+........ .+. .-.+..+.+++++. +|.|+.+|..+++.+........
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 88888999999999999998876543220 111 11223567777663 79999999999888776653211
Q ss_pred cC-----CCCceeEE-----Eec-----cccccCcCCCe-EEEEEecCCCEEEEEecC----------------CcEEEE
Q 046226 174 PK-----TGGAVRNL-----IVG-----KDKMMKHMGPI-TSIAINVSDDTLYSASLD----------------KTIKVW 221 (434)
Q Consensus 174 ~~-----~~~~~~~~-----~~~-----~~~~~~~~~~v-~~~~~~~~~~~l~s~~~d----------------g~i~vw 221 (434)
.. ........ ... ...+..-...+ ..+++.++..+++.+..+ +.|..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 00 00000000 000 00000001111 245566777788877655 379999
Q ss_pred EcCCCeeEEEcccCcc----------CeEEEEEc-CCC----eEEEEeCCCeEEEEecccccCcceeEEEEE--------
Q 046226 222 RIRDSKCIETIQAHSE----------PINALVVA-DDG----VLYSASDDATVRVWRRYFYSENQLHTLILT-------- 278 (434)
Q Consensus 222 d~~~~~~~~~~~~~~~----------~v~~~~~~-~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------- 278 (434)
|.++|+.+..++.... ++. +... .++ .++.++.+|.+.++|... +.........
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t--G~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD--GALVSANKLDDTVNVFKS 360 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT--CCEEEEEESSTTCCSEEE
T ss_pred eCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC--CCEeecccccCCcccccc
Confidence 9999999887764321 121 2221 344 466688999999999762 2221111100
Q ss_pred ec-ccccC--------------------------eEEEEEecCCCEEEEEc-----------------------------
Q 046226 279 LT-AKYSP--------------------------VKTLTLTLDDGLLYGGC----------------------------- 302 (434)
Q Consensus 279 ~~-~~~~~--------------------------v~~~~~~~~~~~l~~~~----------------------------- 302 (434)
.. ....+ -..++++|+..++++..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 00 00000 12456677666555432
Q ss_pred ----------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeec
Q 046226 303 ----------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVG 370 (434)
Q Consensus 303 ----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 370 (434)
.+|.|..||+.+.+...+......... -.+...+.+++.++.||.++.||.+++ +.+..++.
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagg~vf~gt~dg~l~A~D~~tG---~~lW~~~l 512 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWG---GTMATAGDLVFYGTLDGYLKARDSDTG---DLLWKFKI 512 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTC---CEEEEEEC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccC---cceEecCCEEEEECCCCeEEEEECCCC---CEEEEeeC
Confidence 346777888776655444321111111 123445778888999999999999998 55555543
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=2.8e-06 Score=76.49 Aligned_cols=188 Identities=10% Similarity=-0.022 Sum_probs=116.4
Q ss_pred eEEEEEecCCCEEEEEecC------CcEEEEEcCCCeeEEEcccCcc---CeEEEEEcCCC-eEEEEe------------
Q 046226 197 ITSIAINVSDDTLYSASLD------KTIKVWRIRDSKCIETIQAHSE---PINALVVADDG-VLYSAS------------ 254 (434)
Q Consensus 197 v~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~-~l~s~~------------ 254 (434)
-..+.+.|+| .++++..+ |.|.++|.++++.+.++..... .-..+.|+|++ .+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 4566778999 66666555 7899999999999998874322 24468889998 666663
Q ss_pred -------CCCeEEEEecccccCcceeEEEEEecc--cccCeEEEEE--ecCCCEEEEEcC------CCeEEEEEcCcccc
Q 046226 255 -------DDATVRVWRRYFYSENQLHTLILTLTA--KYSPVKTLTL--TLDDGLLYGGCT------DGYIHYWHKGWFSA 317 (434)
Q Consensus 255 -------~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~~~l~~~~~------dg~i~i~d~~~~~~ 317 (434)
.+.+|.+||+.. .+....+.. .......+.| +|++++++++++ +++|.+|.......
T Consensus 219 ~~~~~~~~~d~V~v~D~~~------~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~ 292 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRK------RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW 292 (462)
T ss_dssp TTTHHHHSCCEEEEEETTT------TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE
T ss_pred hhhhhhccCCEEEEEECCC------CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce
Confidence 378999999972 122333332 2233445555 999999888874 56887765432110
Q ss_pred ccc---------ccCccc-------CcccceEE--EEeeCCEEEEec-CCCcEEEEeccCCCceeeEEEeeccc------
Q 046226 318 QLQ---------YGGALQ-------GHTHAVMC--LASVANYVISGS-ADSTSRVWAREQDGRHTMLAVLVGHR------ 372 (434)
Q Consensus 318 ~~~---------~~~~~~-------~~~~~v~~--~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~h~------ 372 (434)
... ....+. +-...... ++.+|++|.++. ..+.|.+||+......+.+..+....
T Consensus 293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~ 372 (462)
T 2ece_A 293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRAD 372 (462)
T ss_dssp EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBC
T ss_pred eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccc
Confidence 000 000000 00112333 455677766655 47899999997554445555554321
Q ss_pred --------cceeEEEEeecccCCCCCCcccEEEEee
Q 046226 373 --------GPIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 373 --------~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
+.-..++++|+ |++|+++.
T Consensus 373 ~~~G~~~~ggPr~~~lSpD---------Gk~LyVaN 399 (462)
T 2ece_A 373 HPAGHKLTGAPQMLEISRD---------GRRVYVTN 399 (462)
T ss_dssp CTTSCCCCSCCCCEEECTT---------SSEEEEEC
T ss_pred ccccccCCCCCCEEEEcCC---------CCEEEEEc
Confidence 12577999999 88888777
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.85 E-value=2.2e-07 Score=86.67 Aligned_cols=240 Identities=11% Similarity=0.022 Sum_probs=142.3
Q ss_pred EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE-e-cCCCEEEEEe-------
Q 046226 144 RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI-N-VSDDTLYSAS------- 213 (434)
Q Consensus 144 ~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~s~~------- 213 (434)
++++... ++.|.+.|+.+.+..+.+.+ ........+++ . |+++++++++
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~i---------------------p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEI---------------------PNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC---------------------SSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeC---------------------CCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 5555444 67899999988766654432 12344677787 4 8999998884
Q ss_pred -----------cCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCCC---------------eEEEEec--
Q 046226 214 -----------LDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDDA---------------TVRVWRR-- 264 (434)
Q Consensus 214 -----------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg---------------~i~iwd~-- 264 (434)
.++.+.++|.++.+.+.++.... ....+++++++ ++++.+.+. .|.+.|+
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~ 240 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE 240 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccc
Confidence 35689999999999888877433 45678899999 666665442 3444443
Q ss_pred ---------------------ccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCccccc----
Q 046226 265 ---------------------YFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSAQ---- 318 (434)
Q Consensus 265 ---------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~---- 318 (434)
+...... ....+. -.....++.++|||+++++++ .+.+|.++|+.+....
T Consensus 241 ~~~~v~~Gk~~~i~~V~VID~~~~~~~~---~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 241 IEKAIAAGDYQELNGVKVVDGRKEASSL---FTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp HHHHHHHTCSEEETTEEEEECSGGGCCS---SEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred eeEeccCCCeeEECcEEEEeCcccCCce---eEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc
Confidence 3100000 011111 112456789999999877765 5789999998744210
Q ss_pred c----cccCcccCcccceEEEEee--CCEEEEecCCCcEEEEeccCC-------CceeeEEEeeccccceeEEEEeeccc
Q 046226 319 L----QYGGALQGHTHAVMCLASV--ANYVISGSADSTSRVWAREQD-------GRHTMLAVLVGHRGPIRCAIAFLGRF 385 (434)
Q Consensus 319 ~----~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~ 385 (434)
+ ......... .....++|+ |...++...|+.|.+||+... +..+.+..+..|-.+-. ..++ .
T Consensus 317 l~~~~~v~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh-~~~~---~ 391 (595)
T 1fwx_A 317 ADPRSAVVAEPELG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH-LKTV---M 391 (595)
T ss_dssp CCGGGGEEECCBCC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE-EEET---T
T ss_pred cCcccceEEEcCCC-CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccc-ceec---c
Confidence 0 011111111 123555665 645566778999999999862 11256666666544321 1111 1
Q ss_pred CCCCCCcccEEEEeec---CCeE----------EEEecCCCC
Q 046226 386 GEETEDEYCTICTGSL---DGVL----------KMWRVTRPK 414 (434)
Q Consensus 386 ~~~~~~~~~~l~s~~~---Dg~v----------~iw~~~~~~ 414 (434)
+...+++|++|+++.. |..+ .++|+..++
T Consensus 392 g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 392 GETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 2223444898888753 4321 788886554
No 248
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=2.2e-05 Score=78.40 Aligned_cols=293 Identities=11% Similarity=0.047 Sum_probs=166.0
Q ss_pred ccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeecc-------CCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCC
Q 046226 93 GQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLK-------AKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDN 163 (434)
Q Consensus 93 ~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~ 163 (434)
..|.++.. ....|..|+.+ -|.+||..+++...... .....|.++...++ .+.+|+..+-|.++|.....
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 289 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQ 289 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC-
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCe
Confidence 46888888 34456666665 68889987655432211 12456899988776 88888885678888876543
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc---------c
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ---------A 234 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---------~ 234 (434)
....... ....+........-....|.++...++|. |..|+.++-|..++..+........ .
T Consensus 290 ~~~~~~~--------~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l 360 (781)
T 3v9f_A 290 FLLPEQI--------RFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSL 360 (781)
T ss_dssp ----------------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCC
T ss_pred eeeeecc--------ccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCC
Confidence 2111100 00000000000001446789998887775 6667767779999987654322110 1
Q ss_pred CccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCc
Q 046226 235 HSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGW 314 (434)
Q Consensus 235 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 314 (434)
....|.++...+++.|..|+.++-|..||..... ..............|.++...+++. |.+|+.++-|..||..+
T Consensus 361 ~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~---~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 436 (781)
T 3v9f_A 361 SNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV---AIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRL 436 (781)
T ss_dssp SSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEE---EECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSS
T ss_pred CCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCe---EEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCC
Confidence 2356899999888878888877778888865110 0000000112335688888887766 55577767788888653
Q ss_pred ccccccccCcccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEee---ccccceeEEEEeecccCCCCC
Q 046226 315 FSAQLQYGGALQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLV---GHRGPIRCAIAFLGRFGEETE 390 (434)
Q Consensus 315 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~ 390 (434)
...... .........|.++..+. ..|..|+. +-|..||..++.. ....... .....|.++...++
T Consensus 437 ~~~~~~--~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~------- 505 (781)
T 3v9f_A 437 KKFQII--ELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSE------- 505 (781)
T ss_dssp CEEEEC--CSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTT-------
T ss_pred CcEEEe--ccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCC-------
Confidence 322111 11012345788888773 46666666 5688899876521 2221111 01356888877665
Q ss_pred CcccEEEEeecCCeEEEEecCCC
Q 046226 391 DEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 391 ~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
|. |..|+.++-|..|+...+
T Consensus 506 --g~-lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 506 --GR-FWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp --CC-EEEEESSSCEEEECTTCC
T ss_pred --CC-EEEEEcCCCEEEEeCCCC
Confidence 55 444555444666776544
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.83 E-value=4.7e-06 Score=68.91 Aligned_cols=195 Identities=11% Similarity=0.077 Sum_probs=127.1
Q ss_pred cceeeeEEEeeccc--cEEEEEEcCCEE-EEEeCC--CeEEEecCCCceeEeeccCCCc-cEEEEEEeCCEEEEEEc-CC
Q 046226 80 SSYRCISSVLKKDG--QILCIAVGNGFI-YTGSDS--NVIRIWKQPEFTECGRLKAKTS-MVVAMEVSHDRVYAAYG-DG 152 (434)
Q Consensus 80 ~~~~~~~~~~~h~~--~v~~~~~~~~~l-~tg~~d--g~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~l~~~s~-dg 152 (434)
-.++.+.++ .|+. -.-.+.|+++.| .+.+.+ ..|+++|+++++.+..+..... .-..+++..+.|+.... ++
T Consensus 7 ~~~~v~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 7 QGYRVVKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH 85 (243)
T ss_dssp CCEEEEEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS
T ss_pred cceEEEEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCC
Confidence 346667776 6654 466899944544 444554 4999999999999888764433 23556777887776665 89
Q ss_pred eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc
Q 046226 153 KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI 232 (434)
Q Consensus 153 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 232 (434)
.+.+||..+.+.+..+.. ...=..+ .+++..|+.+..++.|.++|.++.+.+.++
T Consensus 86 ~v~v~D~~tl~~~~ti~~-----------------------~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRY-----------------------PGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp EEEEEETTTTEEEEEEEC-----------------------SSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EEEEEECCcCcEEEEEeC-----------------------CCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 999999988777766642 1111333 356777777777899999999999888877
Q ss_pred ccCc-----cCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEE-e--------cccccCeEEEEEecCCCE
Q 046226 233 QAHS-----EPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILT-L--------TAKYSPVKTLTLTLDDGL 297 (434)
Q Consensus 233 ~~~~-----~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~--------~~~~~~v~~~~~~~~~~~ 297 (434)
.... ..++.+.+. ++ .++..-.+..|.+.|... +.-....... + .....-.+.|+++|+++.
T Consensus 141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t--G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS--GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT--CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC--CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 6432 345667776 56 444444678899998872 1111111111 0 012235689999998776
Q ss_pred EEEEcC
Q 046226 298 LYGGCT 303 (434)
Q Consensus 298 l~~~~~ 303 (434)
|++.+.
T Consensus 218 lfVTGK 223 (243)
T 3mbr_X 218 LFVTGK 223 (243)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 666553
No 250
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.81 E-value=4.4e-07 Score=81.10 Aligned_cols=255 Identities=7% Similarity=-0.051 Sum_probs=153.7
Q ss_pred ccceeeeEEEeeccccEEEEEE--cCCEEEEEe----------CCCeEEEecCCCceeEeeccCC-------CccEEEEE
Q 046226 79 SSSYRCISSVLKKDGQILCIAV--GNGFIYTGS----------DSNVIRIWKQPEFTECGRLKAK-------TSMVVAME 139 (434)
Q Consensus 79 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~l~ 139 (434)
..+++.+.++..-..+ .+.+ ++++++++. .++.|.+||..+++.+.++..+ ......++
T Consensus 53 ~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 53 AGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEE
T ss_pred CCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEE
Confidence 3456777777655556 6777 888888886 3789999999999999988643 12346788
Q ss_pred EeCC--EEEEEEc--CCeEEE--eecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCC-CEEEEE
Q 046226 140 VSHD--RVYAAYG--DGKIRV--WRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSD-DTLYSA 212 (434)
Q Consensus 140 ~~~~--~l~~~s~--dg~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~ 212 (434)
++|| +++++.. +..+.+ +|..+ +..+.. +.. +.+.|++ ..+++.
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v---------------------~~~-----~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS---------------------ASC-----FHIHPGAAATHYLG 181 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC---------------------SSC-----CCCEEEETTEEECC
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC---------------------CCc-----eEEccCCCeEEEEE
Confidence 9998 6777764 467888 99865 222211 010 1123443 344556
Q ss_pred ecCCcEEEEEcCC-----CeeEE----EcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecc--
Q 046226 213 SLDKTIKVWRIRD-----SKCIE----TIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTA-- 281 (434)
Q Consensus 213 ~~dg~i~vwd~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-- 281 (434)
+.||.+.+.|+++ ++... .+.....+. ....++.++..+. +.|.+.|+... .......+..
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~----~~~v~~~~~~~~ 253 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAA----GATMKAAIDGNE 253 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSS----CCEEECCCCSSC
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCC----cceEEEEEEecc
Confidence 6788888888876 44331 111222333 3333345555556 89999987511 1111111110
Q ss_pred --------cccCeEEEEEecCCCEEEEEcC---------CCeEEEEEcCcccccccccCcccCcccceEEEEe--eCC-E
Q 046226 282 --------KYSPVKTLTLTLDDGLLYGGCT---------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS--VAN-Y 341 (434)
Q Consensus 282 --------~~~~v~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~ 341 (434)
.......++++++++.++++.. ++.+.++|+.+.+.... +.... ...++.+ +++ .
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~----i~vg~-~p~gi~~s~Dg~~l 328 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP----ISNGH-DSDAIIAAQDGASD 328 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC----CEEEE-EECEEEECCSSSCE
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE----EECCC-CcceEEECCCCCEE
Confidence 0111222689999998887643 23567999876543322 22221 3555665 465 5
Q ss_pred EEEec-CCCcEEEEeccCCCceeeEEEeeccccceeEEEEe
Q 046226 342 VISGS-ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381 (434)
Q Consensus 342 l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 381 (434)
+++.. .++.|.++|+.+. +.+..+.....+ ..+++.
T Consensus 329 ~va~~~~~~~VsVID~~t~---kvv~~I~vg~~P-~~i~~~ 365 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASD---QDQSSVELDKGP-ESLSVQ 365 (368)
T ss_dssp EEEEETTTTEEEEEESSSC---EEEEECCCCSCC-CEEECC
T ss_pred EEEccCCCCeEEEEECCCC---cEEEEEECCCCC-CEEEee
Confidence 66666 5999999999998 777777654433 455554
No 251
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=4.7e-07 Score=80.88 Aligned_cols=214 Identities=10% Similarity=0.040 Sum_probs=123.3
Q ss_pred ccccEEEEEE--cCCEEEEEeC-----CCeEEEecCCCceeEeeccC------CCccEEEEEEeCC--EEEEE-E---cC
Q 046226 91 KDGQILCIAV--GNGFIYTGSD-----SNVIRIWKQPEFTECGRLKA------KTSMVVAMEVSHD--RVYAA-Y---GD 151 (434)
Q Consensus 91 h~~~v~~~~~--~~~~l~tg~~-----dg~i~iwd~~~~~~~~~~~~------~~~~v~~l~~~~~--~l~~~-s---~d 151 (434)
|-..+.++++ +++++++-.. ++.|.+||+.+++.+..+.. +...+..++++++ .++.+ . .+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 5567999999 4555554433 57899999998887666543 2245688999963 55444 3 57
Q ss_pred CeEEEeecCCCCCceeeEee--eccCCCCcee---EEE--eccccccCcCCCeEEEEEecCCCEEEEEecCC-cEEEEEc
Q 046226 152 GKIRVWRSTWDNGVKHVKLA--TIPKTGGAVR---NLI--VGKDKMMKHMGPITSIAINVSDDTLYSASLDK-TIKVWRI 223 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~---~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~vwd~ 223 (434)
+.|.+||+.+++........ ..+....... .+. ............+..|+|+|+++.|+.+..++ .|..++.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 89999998766543322100 0000000000 000 00000000113468899999999998887666 4555543
Q ss_pred C---CCe-----eEE--EcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEe
Q 046226 224 R---DSK-----CIE--TIQAHSEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLT 292 (434)
Q Consensus 224 ~---~~~-----~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 292 (434)
. .+. ... ...++......+++.+++ ++++...++.|.+||... + ....+.. ......+..+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~--G--~~~~~~~-~~~~~~p~~va~~ 299 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD--R--AYKLLVT-DEKLSWTDSFNFG 299 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT--T--EEEEEEE-CGGGSCEEEEEEC
T ss_pred HHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC--C--CEEEEEE-CCceecCCeeEEC
Confidence 2 110 000 111233456679999999 777777889999999721 1 1122221 1234568899999
Q ss_pred cCCCEEEEEcCCCeEEE
Q 046226 293 LDDGLLYGGCTDGYIHY 309 (434)
Q Consensus 293 ~~~~~l~~~~~dg~i~i 309 (434)
+++.++++....+.+.+
T Consensus 300 ~~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 300 SDGYLYFDCNQLHHSAP 316 (343)
T ss_dssp TTSCEEEEECCGGGSGG
T ss_pred CCCcEEEEeCccccccc
Confidence 98887777765544433
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.80 E-value=2.3e-06 Score=81.70 Aligned_cols=194 Identities=12% Similarity=0.055 Sum_probs=116.0
Q ss_pred cCCEEEEEeC-CCeEEEecC-CCceeEeeccCCCcc-----------EEEEEE--eCCE----EEEEEcCCeEEEeecCC
Q 046226 101 GNGFIYTGSD-SNVIRIWKQ-PEFTECGRLKAKTSM-----------VVAMEV--SHDR----VYAAYGDGKIRVWRSTW 161 (434)
Q Consensus 101 ~~~~l~tg~~-dg~i~iwd~-~~~~~~~~~~~~~~~-----------v~~l~~--~~~~----l~~~s~dg~i~vwd~~~ 161 (434)
.+..|++++. ++.|.-+|. .+++.+.++...... ...+++ ..+. +++++.|+.|..+|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 4667777777 899999999 899988776543210 123455 3445 99999999999999998
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe------cCCcEEEEEcCCCeeEEEcccC
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS------LDKTIKVWRIRDSKCIETIQAH 235 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~ 235 (434)
++.+.......... + ..-...++ + .+ ..+++++ .+|.|+.+|.++|+.+.++...
T Consensus 141 G~~~W~~~~~~~~~-~------------~~~~ssP~----v-~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 141 GETVWKVENSDIKV-G------------STLTIAPY----V-VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp CCEEEEEECCCGGG-T------------CBCCSCCE----E-ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CCEEEeecCCCCCc-c------------ceeecCCE----E-EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 88776654321100 0 00011111 1 13 3555554 3799999999999998877542
Q ss_pred ccC-------------------------------------e-EEEEEcCCC-eEEEEeCC----------------CeEE
Q 046226 236 SEP-------------------------------------I-NALVVADDG-VLYSASDD----------------ATVR 260 (434)
Q Consensus 236 ~~~-------------------------------------v-~~~~~~~~~-~l~s~~~d----------------g~i~ 260 (434)
... + ..+++.++. +++.+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 0 123454444 66666654 3788
Q ss_pred EEecccccCcceeEEEEEecccc--------cCeEEEEEe-cCC---CEEEEEcCCCeEEEEEcCccccc
Q 046226 261 VWRRYFYSENQLHTLILTLTAKY--------SPVKTLTLT-LDD---GLLYGGCTDGYIHYWHKGWFSAQ 318 (434)
Q Consensus 261 iwd~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~ 318 (434)
.+|.. ++..... .....|. .++. +... .+| ..++.++.+|.++++|..+.+..
T Consensus 282 Ald~~--TG~~~W~--~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 282 GRDAD--TGEAKFG--YQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEETT--TCCEEEE--EESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EEeCC--CCceeeE--eecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 88876 2222222 2222221 1221 2222 456 46777889999999998765543
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.78 E-value=7.9e-06 Score=78.10 Aligned_cols=276 Identities=12% Similarity=0.042 Sum_probs=152.7
Q ss_pred EEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCc----cEE-EEEEeCC------EEEEEEc------CCeEEEeecCC
Q 046226 99 AVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTS----MVV-AMEVSHD------RVYAAYG------DGKIRVWRSTW 161 (434)
Q Consensus 99 ~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~----~v~-~l~~~~~------~l~~~s~------dg~i~vwd~~~ 161 (434)
++.+..|+.++.|+.|..+|..+++.+........ .+. .-....+ .+++++. ++.|..+|..+
T Consensus 114 a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 114 AIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 34577888899999999999999998876543321 111 1112233 5666553 78999999998
Q ss_pred CCCceeeEeeecc--CCCCceeEEE--ecccc-------------c--cCcCCCeEEEEEecCCCEEEEEec--------
Q 046226 162 DNGVKHVKLATIP--KTGGAVRNLI--VGKDK-------------M--MKHMGPITSIAINVSDDTLYSASL-------- 214 (434)
Q Consensus 162 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~-------------~--~~~~~~v~~~~~~~~~~~l~s~~~-------- 214 (434)
++.+......... .......... .+... . .+....-..+++.|+..+++.+..
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 8877654321000 0000000000 00000 0 001111134677787788877663
Q ss_pred ------------C----CcEEEEEcCCCeeEEEccc--Cc--------cCeEEEEEc-CCC----eEEEEeCCCeEEEEe
Q 046226 215 ------------D----KTIKVWRIRDSKCIETIQA--HS--------EPINALVVA-DDG----VLYSASDDATVRVWR 263 (434)
Q Consensus 215 ------------d----g~i~vwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~----~l~s~~~dg~i~iwd 263 (434)
| +.|..+|..+|+.+..++. |. .++. +... .++ .++.++.+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 5899999999999888753 21 1221 1221 344 577889999999999
Q ss_pred cccccCcceeEEEEE--------e-------------------------------ccccc--CeEEEEEecCCCEEEEEc
Q 046226 264 RYFYSENQLHTLILT--------L-------------------------------TAKYS--PVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 264 ~~~~~~~~~~~~~~~--------~-------------------------------~~~~~--~v~~~~~~~~~~~l~~~~ 302 (434)
... +......... . ....+ .-..++++|+..++++..
T Consensus 353 ~~t--G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 353 RSN--GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA 430 (582)
T ss_dssp TTT--CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE
T ss_pred CCC--CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec
Confidence 762 1111111000 0 00000 011346666655555432
Q ss_pred ---------------------------------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCC
Q 046226 303 ---------------------------------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADS 349 (434)
Q Consensus 303 ---------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg 349 (434)
.+|.|..||+.+.+...+......... ..+...+.+++.|+.||
T Consensus 431 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagglvf~g~~dg 507 (582)
T 1flg_A 431 NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWA---GVLATAGNLVFTGTGDG 507 (582)
T ss_dssp ECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCS---CCEEETTTEEEEECTTS
T ss_pred hhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcc---cceEeCCCEEEEECCCC
Confidence 257888888877665554322111111 12334577888899999
Q ss_pred cEEEEeccCCCceeeEEEeecccccee-EEEEeec
Q 046226 350 TSRVWAREQDGRHTMLAVLVGHRGPIR-CAIAFLG 383 (434)
Q Consensus 350 ~i~iwd~~~~~~~~~~~~~~~h~~~v~-~~~~~~~ 383 (434)
.++.||.+++ +.+..++...+.+. -+.+..+
T Consensus 508 ~l~A~D~~tG---~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 508 YFKAFDAKSG---KELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp EEEEEETTTC---CEEEEEECSSCCCSCCEEEEET
T ss_pred cEEEEECCCC---CEEEEecCCCCcccCceEEEEC
Confidence 9999999998 56666654333221 2555555
No 254
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=3.9e-05 Score=76.55 Aligned_cols=287 Identities=9% Similarity=0.008 Sum_probs=166.4
Q ss_pred cccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeec--------------cCCCccEEEEEEeCC-EEEEEEcCCeEE
Q 046226 92 DGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRL--------------KAKTSMVVAMEVSHD-RVYAAYGDGKIR 155 (434)
Q Consensus 92 ~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~--------------~~~~~~v~~l~~~~~-~l~~~s~dg~i~ 155 (434)
...|.++.. ....|..|+..+-|.++|..+....... ......|.++....+ .|.+|+.++-|.
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~ 336 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGIN 336 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEE
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEE
Confidence 356888888 5667788887567888887765432211 113457899988876 788899888888
Q ss_pred EeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc---
Q 046226 156 VWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI--- 232 (434)
Q Consensus 156 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--- 232 (434)
.++...... ..+........ ...-....|.++...+++. |..|+.++-|..||..+++...-.
T Consensus 337 ~~~~~~~~~-~~~~~~~~~~~------------~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~ 402 (781)
T 3v9f_A 337 FISNAPPTF-HTWSYSPTQMN------------ESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENR 402 (781)
T ss_dssp EECSSCCSC-EEEC----CCC------------SSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC----
T ss_pred EeCCCCCcc-eeeccCccccc------------cCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCC
Confidence 888654322 11110000000 0001345688988877665 556676667999998654432111
Q ss_pred ccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEe--cccccCeEEEEEecCCCEEEEEcCCCeEEEE
Q 046226 233 QAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTL--TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYW 310 (434)
Q Consensus 233 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 310 (434)
......|.++...+++.|..|+.++-|..+|.. ........ ......|.++...+++. |..|+. +-|..|
T Consensus 403 ~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~------~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~ 474 (781)
T 3v9f_A 403 ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTR------LKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVI 474 (781)
T ss_dssp -CCCSBEEEEEECTTSCEEEEETTEEEEEECSS------SCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEE
T ss_pred CCCCcceEEEEECCCCCEEEEeccCCEEEEcCC------CCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEE
Confidence 123467899998888877778877778888764 11111111 12345788888887766 555555 558888
Q ss_pred EcCcccccccccCc-ccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEeec----cccceeEEEEeecc
Q 046226 311 HKGWFSAQLQYGGA-LQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLVG----HRGPIRCAIAFLGR 384 (434)
Q Consensus 311 d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~ 384 (434)
|............. .......|.++..+. ..|..|+.++-|..||..++ . +..+.. ....|.++...++
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~---~-~~~~~~~~~l~~~~i~~i~~d~~- 549 (781)
T 3v9f_A 475 DLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ---L-VRKFNQYEGFCSNTINQIYRSSK- 549 (781)
T ss_dssp ESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC---E-EEEECTTTTCSCSCEEEEEECTT-
T ss_pred eCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC---e-EEEccCCCCCCCCeeEEEEECCC-
Confidence 87543221111000 011135688887763 35566666455777887654 2 222221 1346777777665
Q ss_pred cCCCCCCcccEEEEeecCCeEEEEecCCCC
Q 046226 385 FGEETEDEYCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 385 ~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
|.+.+ |+.+|.|..||..+++
T Consensus 550 --------g~lWi-~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 550 --------GQMWL-ATGEGLVCFPSARNFD 570 (781)
T ss_dssp --------SCEEE-EETTEEEEESCTTTCC
T ss_pred --------CCEEE-EECCCceEEECCCCCc
Confidence 55444 4446665888876554
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.74 E-value=3.7e-06 Score=70.11 Aligned_cols=175 Identities=10% Similarity=-0.010 Sum_probs=107.9
Q ss_pred eEEEEEecCCCEEEEEecCC--cEEEEEcCCCeeEEEcccCccC-eEEEEEcCCCeEEEEeCCCeEEEEecccccCccee
Q 046226 197 ITSIAINVSDDTLYSASLDK--TIKVWRIRDSKCIETIQAHSEP-INALVVADDGVLYSASDDATVRVWRRYFYSENQLH 273 (434)
Q Consensus 197 v~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 273 (434)
...+.|+ ++.++.+.+.+| .|+++|+++++.+..+...... -..++...+..++..-.++.+.+||.. ..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~------t~ 117 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR------NL 117 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT------TC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc------cC
Confidence 4788888 666666777666 8999999999998888654332 234555544355555578999999987 22
Q ss_pred EEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcc-cceEEEEee-CCEEEEecCCCcE
Q 046226 274 TLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHT-HAVMCLASV-ANYVISGSADSTS 351 (434)
Q Consensus 274 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~l~s~~~dg~i 351 (434)
+.+..+.... ....+.++++.|+.+..++.|.++|..+.+......-...+.. ..+..+.+. |...+..-.+..|
T Consensus 118 ~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I 194 (262)
T 3nol_A 118 RQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKI 194 (262)
T ss_dssp CEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEE
T ss_pred cEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeE
Confidence 2233332211 2233446778888877788999999876544333211111111 223345554 4444445468899
Q ss_pred EEEeccCCCceeeEEEeecc------------ccceeEEEEeecc
Q 046226 352 RVWAREQDGRHTMLAVLVGH------------RGPIRCAIAFLGR 384 (434)
Q Consensus 352 ~iwd~~~~~~~~~~~~~~~h------------~~~v~~~~~~~~~ 384 (434)
.+.|..++ +.+..+... ....+.++++|+.
T Consensus 195 ~vIDp~tG---~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 195 VRIDPETG---KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEECTTTC---BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEECCCC---cEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 99999998 444444321 1345789999983
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.73 E-value=1.4e-05 Score=76.41 Aligned_cols=118 Identities=11% Similarity=0.001 Sum_probs=73.5
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeEeeccCCCcc---------EEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEee
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSM---------VVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~---------v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~ 171 (434)
.+..|++++.++.|..+|..+++.+.++...... ...+++..+.+++++.|+.|..+|..+++.+......
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 4556666666445999999999988776543221 1234556778999999999999999998887666432
Q ss_pred eccCCCCceeEEEeccccccCcCCCeEEEEEe-cCCC-EEEEEec------CCcEEEEEcCCCeeEEEcc
Q 046226 172 TIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN-VSDD-TLYSASL------DKTIKVWRIRDSKCIETIQ 233 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-~l~s~~~------dg~i~vwd~~~~~~~~~~~ 233 (434)
..... ......++. .=. .+++ .+++++. +|.|+.+|.++|+.+....
T Consensus 147 ~~~~~-------------~~~~~sP~v--~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 147 DHGAG-------------YTMTGAPTI--VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp CGGGT-------------CBCCSCCEE--EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CCCcC-------------cccccCCEE--eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 11000 000111211 100 1123 5666543 7899999999999887654
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.72 E-value=1.2e-06 Score=81.65 Aligned_cols=249 Identities=9% Similarity=0.008 Sum_probs=149.6
Q ss_pred EEEEE-----cCCEEEEEeC-CCeEEEecCCCceeEeeccCC-CccEEEEEE-e-CC--EEEEEE---------------
Q 046226 96 LCIAV-----GNGFIYTGSD-SNVIRIWKQPEFTECGRLKAK-TSMVVAMEV-S-HD--RVYAAY--------------- 149 (434)
Q Consensus 96 ~~~~~-----~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~l~~-~-~~--~l~~~s--------------- 149 (434)
..+++ ||++|+.... ++.|.+.|+.+.+....+.-. ......+++ . |+ ++++++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 45666 7788877765 457999999999987744321 245788887 3 65 777774
Q ss_pred ---cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecC-----------
Q 046226 150 ---GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLD----------- 215 (434)
Q Consensus 150 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------- 215 (434)
.++.+.+.|..+.+....+.+.. ....++++|+|+++++.+.+
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg-----------------------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~ 226 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG-----------------------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMT 226 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS-----------------------CCCCEEECSSSSEEEEEESCTTCCSSHHHHT
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC-----------------------CccceEECCCCCEEEEEecCcccCcchhhcc
Confidence 24678888888765555554311 22334455666665555533
Q ss_pred ---------------------------CcEEEEEcCC--Cee-EEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEe
Q 046226 216 ---------------------------KTIKVWRIRD--SKC-IETIQAHSEPINALVVADDG--VLYSASDDATVRVWR 263 (434)
Q Consensus 216 ---------------------------g~i~vwd~~~--~~~-~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd 263 (434)
+.|.+.|..+ ++. +..+.. .....++.++||| .++++..+..|.++|
T Consensus 227 ~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 227 AAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp CCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred ccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence 2477888876 444 444443 2355789999999 555566789999999
Q ss_pred cccccC------cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccc------ccccccCcccCcccc
Q 046226 264 RYFYSE------NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFS------AQLQYGGALQGHTHA 331 (434)
Q Consensus 264 ~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~ 331 (434)
+..... .......... .-......++|+++|...++...|+.|.+||+.... ........+..|..+
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred CcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 873210 0011122222 233467899999999444556779999999986521 112222233333222
Q ss_pred e-EE------EEeeCCEEEEecC---CCcE----------EEEeccCCCceeeEEEeec
Q 046226 332 V-MC------LASVANYVISGSA---DSTS----------RVWAREQDGRHTMLAVLVG 370 (434)
Q Consensus 332 v-~~------~~~~~~~l~s~~~---dg~i----------~iwd~~~~~~~~~~~~~~~ 370 (434)
- .+ +..+|++|++... |+.+ .++|+.. ++.+++.....
T Consensus 385 Gh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~-~~m~lv~d~p~ 442 (595)
T 1fwx_A 385 GHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG-DKMVLVHDGPT 442 (595)
T ss_dssp EEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS-SSCEEEEEEEE
T ss_pred ccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC-CcEEEEEEEcC
Confidence 1 11 1346888887653 4432 8899954 44566655444
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.68 E-value=3.3e-05 Score=68.09 Aligned_cols=239 Identities=6% Similarity=-0.038 Sum_probs=136.6
Q ss_pred EEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeec-cC------------------CCccEEEEEEeC-C-EEEEEEcC
Q 046226 95 ILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRL-KA------------------KTSMVVAMEVSH-D-RVYAAYGD 151 (434)
Q Consensus 95 v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~-~~------------------~~~~v~~l~~~~-~-~l~~~s~d 151 (434)
..++++ ++++++++..++.|..|+..+++..... .. .......+++.+ + .|+++...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 455677 6677888888999999998765432111 00 013578899996 4 78888776
Q ss_pred CeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEec----------------
Q 046226 152 GKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASL---------------- 214 (434)
Q Consensus 152 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~---------------- 214 (434)
+.|..+|...+. +..+. .... .........+++.+ +|++.++-..
T Consensus 101 ~~i~~~d~~~g~-~~~~~--~~~~---------------~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 101 YHLSVVGSEGGH-ATQLA--TSVD---------------GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp TEEEEECTTCEE-CEEEE--SEET---------------TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTC
T ss_pred CCEEEEeCCCCE-EEEec--ccCC---------------CCcccccceEEEecCCCEEEEECCcccccccccceehcccC
Confidence 668888765322 11110 0000 01123467899999 8876665432
Q ss_pred -CCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEE-eCCCeEEEEecccccCcceeEEEEEecccccCeEEEEE
Q 046226 215 -DKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSA-SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTL 291 (434)
Q Consensus 215 -dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 291 (434)
++.|..||..+++...... .......|++++++ .|+.+ ..++.|.+|++...... ........ .+ ...+++
T Consensus 163 ~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-~~~~~~~~---~g-P~gi~~ 236 (322)
T 2fp8_A 163 KTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-TAEVLVKI---PN-PGNIKR 236 (322)
T ss_dssp CCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-CEEEEEEC---SS-EEEEEE
T ss_pred CCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-ccceEEeC---CC-CCCeEE
Confidence 3678999987776432222 22345679999998 45544 56689999997621111 11121121 22 778999
Q ss_pred ecCCCEEEEEcC----------CCeEEEEEcCcccccccccCcccCc-ccceEEEEeeCC-EEEEecCCCcEEEEeccCC
Q 046226 292 TLDDGLLYGGCT----------DGYIHYWHKGWFSAQLQYGGALQGH-THAVMCLASVAN-YVISGSADSTSRVWAREQD 359 (434)
Q Consensus 292 ~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~ 359 (434)
+++|++.++... .+.|..+|... .....+ ....+. ...+.++.+.+. ++++...++.|..+++...
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G-~~~~~~-~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEFG-NILEVI-PLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTTS-CEEEEE-ECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCCC-CEEEEE-ECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 999986666544 46677887532 111111 111111 123445555544 4455556788999987643
No 259
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.64 E-value=0.00021 Score=63.08 Aligned_cols=285 Identities=9% Similarity=-0.033 Sum_probs=148.4
Q ss_pred cceeeeEEEeeccccEEEEEE-c-CCEEEEEeCCCeEEEecCCCc---eeEee-ccCCCccEEEEEEeCCEEEEEEcCCe
Q 046226 80 SSYRCISSVLKKDGQILCIAV-G-NGFIYTGSDSNVIRIWKQPEF---TECGR-LKAKTSMVVAMEVSHDRVYAAYGDGK 153 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~-~-~~~l~tg~~dg~i~iwd~~~~---~~~~~-~~~~~~~v~~l~~~~~~l~~~s~dg~ 153 (434)
.+|+.+.. .-...+.++.| + +..++ ++.+|.|... ...+ +.+.. .......+.+|.+.++.+++++.++.
T Consensus 25 ~~W~~~~~--~~~~~~~~v~~~~~~~~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~ 100 (327)
T 2xbg_A 25 NPWEAIQL--PTTATILDMSFIDRHHGWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPI 100 (327)
T ss_dssp CCEEEEEC--SCSSCEEEEEESSSSCEEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTE
T ss_pred CCceEeec--CCCCcEEEEEECCCCcEEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCe
Confidence 35655542 33457999999 4 44555 5567766433 2223 33221 11234578999999887666777775
Q ss_pred EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEc-
Q 046226 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETI- 232 (434)
Q Consensus 154 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~- 232 (434)
|.. ..+.++.-..... . ..+...+..+.+.+++..++++ .+|.|..- .+.++.-...
T Consensus 101 i~~-S~DgG~tW~~~~~---~----------------~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~ 158 (327)
T 2xbg_A 101 MLH-TTDGGQSWSQIPL---D----------------PKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALV 158 (327)
T ss_dssp EEE-ESSTTSSCEECCC---C----------------TTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEE
T ss_pred EEE-ECCCCCCceECcc---c----------------cCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEee
Confidence 543 2222222221110 0 0123446777777766655555 46654332 2223322222
Q ss_pred ccCccCeEEEEEcCCCeEEEEeCCCeEEE-EecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEE
Q 046226 233 QAHSEPINALVVADDGVLYSASDDATVRV-WRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWH 311 (434)
Q Consensus 233 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 311 (434)
......+..+.+.+++.++..+.+|.+.. +|- ......... ......+..+.+.+++..++ ++.+|.+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~----gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP----GQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSD 231 (327)
T ss_dssp CSCCCCEEEEEECTTSCEEEEETTSSEEEEECT----TCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC----CCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEec
Confidence 23455788999998884445555555443 331 012233222 23445788899988887654 45678877764
Q ss_pred cCcccccccccCcc-cCcccceEEEEee--CCEEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCC
Q 046226 312 KGWFSAQLQYGGAL-QGHTHAVMCLASV--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEE 388 (434)
Q Consensus 312 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 388 (434)
.+.. ......... ..+...+.++.+. +..+++ +.+|.| ++..+.+..+..+.........+.++.+.++
T Consensus 232 ~D~G-~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~----- 303 (327)
T 2xbg_A 232 PDNS-ENWGELLSPLRRNSVGFLDLAYRTPNEVWLA-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP----- 303 (327)
T ss_dssp TTEE-EEECCCBCTTSSCCSCEEEEEESSSSCEEEE-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET-----
T ss_pred CCCC-CeeEeccCCcccCCcceEEEEecCCCEEEEE-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC-----
Confidence 2211 111111110 0122346777775 344444 447766 4455555444433222123456788888754
Q ss_pred CCCcccEEEEeecCCeEEEEec
Q 046226 389 TEDEYCTICTGSLDGVLKMWRV 410 (434)
Q Consensus 389 ~~~~~~~l~s~~~Dg~v~iw~~ 410 (434)
+ .++.++.+|.|.-++-
T Consensus 304 ----~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 304 ----D-QGFILGQKGILLRYVT 320 (327)
T ss_dssp ----T-EEEEECSTTEEEEECC
T ss_pred ----C-ceEEEcCCceEEEEcC
Confidence 3 4667778998776653
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.63 E-value=1.1e-05 Score=67.27 Aligned_cols=183 Identities=10% Similarity=0.006 Sum_probs=113.9
Q ss_pred CeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCcc-CeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeE
Q 046226 196 PITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSE-PINALVVADDGVLYSASDDATVRVWRRYFYSENQLHT 274 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 274 (434)
-...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ .... .-..+++..+.+++..-.++.+.+||.. ..+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~------Tl~ 127 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM------PPQ 127 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT------TTE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC------cCc
Confidence 34788887 4566667778889999999999988877 3322 2234666655455566678999999987 222
Q ss_pred EEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCc-ccceEEEEee-CCEEEEecCCCcEE
Q 046226 275 LILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGH-THAVMCLASV-ANYVISGSADSTSR 352 (434)
Q Consensus 275 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~l~s~~~dg~i~ 352 (434)
.+..+... ..-..+ .++++.|+.+..++.|.++|..+.+......-...+. ...+..+.+. |...+..-.+..|.
T Consensus 128 ~~~ti~~~-~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 128 RERTTRYS-GEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVL 204 (268)
T ss_dssp EEEEEECS-SCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEE
T ss_pred EEEEEeCC-CceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEE
Confidence 33333221 112233 3567888888889999999987654433321111111 1133556664 54444444678999
Q ss_pred EEeccCCCceeeEEEeecc-------------ccceeEEEEeecccCCCCCCcccEEEEee
Q 046226 353 VWAREQDGRHTMLAVLVGH-------------RGPIRCAIAFLGRFGEETEDEYCTICTGS 400 (434)
Q Consensus 353 iwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~ 400 (434)
+.|..++ +.+..+... ..-.+.|++.|+. ..+++||-
T Consensus 205 vIDp~TG---~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~--------~rlfVTGK 254 (268)
T 3nok_A 205 EIDPATG---TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS--------GRIFMTGK 254 (268)
T ss_dssp EECTTTC---BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT--------CCEEEEET
T ss_pred EEeCCCC---cEEEEEECCCCcccccccccCcCCceEEEEEcCCC--------CEEEEeCC
Confidence 9999998 444444321 1356789999974 56666664
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.62 E-value=3.7e-05 Score=63.57 Aligned_cols=186 Identities=10% Similarity=-0.052 Sum_probs=113.7
Q ss_pred CCeEEEEEecCCCEEEEEecC--CcEEEEEcCCCeeEEEcccCccC-eEEEEEcCCCeEEEEeCCCeEEEEecccccCcc
Q 046226 195 GPITSIAINVSDDTLYSASLD--KTIKVWRIRDSKCIETIQAHSEP-INALVVADDGVLYSASDDATVRVWRRYFYSENQ 271 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 271 (434)
.-...+.|+. +.++.+.+.+ +.|+++|+.+++.+..+...... -..+++..+..+...-.++.+.+||..
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~------ 93 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA------ 93 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT------
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC------
Confidence 4466889985 5555555554 48999999999998887644332 234555544355556678999999986
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcc-cceEEEEeeC-CEEEEecCCC
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHT-HAVMCLASVA-NYVISGSADS 349 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~~-~~l~s~~~dg 349 (434)
..+.+..+..... -..+ .+++..|+.+..++.|.++|..+........-...+.. ..+..+.+.+ ..++..-.+.
T Consensus 94 tl~~~~ti~~~~~-Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~ 170 (243)
T 3mbr_X 94 TLTPRARFRYPGE-GWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTS 170 (243)
T ss_dssp TTEEEEEEECSSC-CCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTT
T ss_pred cCcEEEEEeCCCC-ceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCC
Confidence 2223333332222 2233 45677777777899999999876544333211111111 2344566654 4444444678
Q ss_pred cEEEEeccCCCceeeEEEeecc-------------ccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 350 TSRVWAREQDGRHTMLAVLVGH-------------RGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 350 ~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
.|.+.|..++ +.+..+.-. ..-.+.|++.|+. ..+++||-.
T Consensus 171 ~I~vIDp~tG---~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~--------~~lfVTGK~ 224 (243)
T 3mbr_X 171 RIARIDPASG---KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH--------DRLFVTGKR 224 (243)
T ss_dssp EEEEECTTTC---BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT--------TEEEEEETT
T ss_pred eEEEEECCCC---CEEEEEECCcCccccccccCCcCCceEEEEEcCCC--------CEEEEECCC
Confidence 9999999998 444444311 1356789999974 556666644
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=0.00015 Score=61.89 Aligned_cols=193 Identities=9% Similarity=0.006 Sum_probs=115.7
Q ss_pred ccEEEEEE--cCCEE-EEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCCCce
Q 046226 93 GQILCIAV--GNGFI-YTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDNGVK 166 (434)
Q Consensus 93 ~~v~~~~~--~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~~~~ 166 (434)
..+.++++ +++.| ++-..++.|.+++.........+...-.....++++++ .++.+.. .+.|.+++.+.... .
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-R 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-E
Confidence 35678888 34444 45556789999998765443333333346789999873 5665544 67899888754321 1
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec---CCcEEEEEcCCCeeEEEcc-cCccCeEEE
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL---DKTIKVWRIRDSKCIETIQ-AHSEPINAL 242 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~-~~~~~v~~~ 242 (434)
.+. .........++++|++..|+.+.. .+.|..+++.... ...+. ........+
T Consensus 115 ~~~---------------------~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gi 172 (267)
T 1npe_A 115 VLF---------------------DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGL 172 (267)
T ss_dssp EEE---------------------CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEE
T ss_pred EEE---------------------ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEE
Confidence 110 011235688999997777666654 3688888876432 22221 233467899
Q ss_pred EEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccc
Q 046226 243 VVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 243 ~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 316 (434)
++++++ ++++-...+.|.++|+.. . ........ ......++.. ++.++++....+.|..+|....+
T Consensus 173 a~d~~~~~lyv~d~~~~~I~~~~~~g---~---~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 173 TFDAFSSQLCWVDAGTHRAECLNPAQ---P---GRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTE---E---EEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEcCCCCEEEEEECCCCEEEEEecCC---C---ceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC
Confidence 999975 445555678999999861 1 11111111 2334566654 34444444456899999976443
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.57 E-value=3.4e-05 Score=68.09 Aligned_cols=249 Identities=9% Similarity=0.056 Sum_probs=133.1
Q ss_pred EEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEecc--ccccCcCCCeEEEEEecCCCEEE
Q 046226 135 VVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGK--DKMMKHMGPITSIAINVSDDTLY 210 (434)
Q Consensus 135 v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~ 210 (434)
..++++.++ .++++..++.|..||..... ...+.... ..... ....+. .........+..+++.+++..|+
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~--~~~~~--~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-FVDFAYAS--PYWNK--AFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTC-EEEEEESC--TTCCH--HHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCc-eEEEeccc--ccccc--cccccccchhccccCCCCceEEEcCCCCcEE
Confidence 455677775 47888888999999876432 22111100 00000 000000 00001123578899997444566
Q ss_pred EEecCCcEEEEEcCCCeeEEEccc-----CccCeEEEEEcC-CCeEEEEeC------------------CCeEEEEeccc
Q 046226 211 SASLDKTIKVWRIRDSKCIETIQA-----HSEPINALVVAD-DGVLYSASD------------------DATVRVWRRYF 266 (434)
Q Consensus 211 s~~~dg~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~l~s~~~------------------dg~i~iwd~~~ 266 (434)
++...+.|..+|..+++. ..+.. .......+++.+ ++.++.+.. ++.|..||...
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 665556688899776542 22211 123468899999 884444332 36687887541
Q ss_pred ccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccc-cccccCcccCcccceEEEEee--CCEE
Q 046226 267 YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSA-QLQYGGALQGHTHAVMCLASV--ANYV 342 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~v~~~~~~--~~~l 342 (434)
........ .......++++++++.|+++ ...+.|.+|++..... .......+.+ ...++++ |++.
T Consensus 175 ---~~~~~~~~----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 175 ---KETTLLLK----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRNADGHFW 243 (322)
T ss_dssp ---TEEEEEEE----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS----EEEEEECTTSCEE
T ss_pred ---CEEEEecc----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC----CCCeEECCCCCEE
Confidence 11111111 12345679999999876655 5578999999864211 1111111112 4555655 5655
Q ss_pred EEecC----------CCcEEEEeccCCCceeeEEEeeccc----cceeEEEEeecccCCCCCCcccEEEEeecCCeEEEE
Q 046226 343 ISGSA----------DSTSRVWAREQDGRHTMLAVLVGHR----GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408 (434)
Q Consensus 343 ~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw 408 (434)
++... .+.|..+|.. + +.+..+.... ..++++++ .+ +.+.++....+.|..+
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~-G---~~~~~~~~~~g~~~~~~~~~~~-~~---------g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEF-G---NILEVIPLPPPFAGEHFEQIQE-HD---------GLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTT-S---CEEEEEECCTTTTTSCCCEEEE-ET---------TEEEEECSSCSEEEEE
T ss_pred EEecCcccccccCCCccEEEEECCC-C---CEEEEEECCCCCccccceEEEE-eC---------CEEEEeecCCCceEEE
Confidence 55433 4667788764 3 3444443322 34566665 34 6677777788899999
Q ss_pred ecCCCC
Q 046226 409 RVTRPK 414 (434)
Q Consensus 409 ~~~~~~ 414 (434)
++....
T Consensus 310 ~~~~~~ 315 (322)
T 2fp8_A 310 VYDKKG 315 (322)
T ss_dssp EC----
T ss_pred eccccc
Confidence 987443
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.57 E-value=4.1e-05 Score=74.70 Aligned_cols=266 Identities=9% Similarity=-0.040 Sum_probs=133.8
Q ss_pred cCCEEEEEeCCC-----------eEEEecCCCcee--Eeecc-CCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCC
Q 046226 101 GNGFIYTGSDSN-----------VIRIWKQPEFTE--CGRLK-AKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDN 163 (434)
Q Consensus 101 ~~~~l~tg~~dg-----------~i~iwd~~~~~~--~~~~~-~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~ 163 (434)
++++++.|+.++ .+.+||..+.+- +..+. .+.....++++..+ .+++|+. +..+.+||..+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 778888887543 688999877542 22221 22333334555553 5555553 5689999987553
Q ss_pred CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-cC-----CcEEEEEcCCCeeEEEc-----
Q 046226 164 GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-LD-----KTIKVWRIRDSKCIETI----- 232 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----g~i~vwd~~~~~~~~~~----- 232 (434)
..... .. .....-.++++.++++.++.|+ .+ ..+.+||..+.+-...-
T Consensus 277 W~~~~---~~------------------~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 277 WIPGP---DM------------------QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp EEECC---CC------------------SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred eeECC---CC------------------CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence 22111 00 1111223445557899999888 34 56999999876533220
Q ss_pred ccCccCeEEEEEcCCC-eEEEEeCC---------CeEEEEecccccCcceeEEEEEecc------cccCeEEEEEec-CC
Q 046226 233 QAHSEPINALVVADDG-VLYSASDD---------ATVRVWRRYFYSENQLHTLILTLTA------KYSPVKTLTLTL-DD 295 (434)
Q Consensus 233 ~~~~~~v~~~~~~~~~-~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~-~~ 295 (434)
......-. ..+..++ .++.++.+ ..+..||... . ........... ....-.++.+.. ++
T Consensus 336 p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~--~-~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 336 PMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG--S-GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp GGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST--T-CEEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred cccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCC--c-ceeecCCccccccccCCCCCCCceEeccCCCC
Confidence 00000000 1112233 44444444 3567777652 1 11111111110 011223444443 67
Q ss_pred CEEEEEcCCC-----------eEEEEEcCcccccccccCcccCcccceEEEEe-eCCEEEEecCC-----------CcEE
Q 046226 296 GLLYGGCTDG-----------YIHYWHKGWFSAQLQYGGALQGHTHAVMCLAS-VANYVISGSAD-----------STSR 352 (434)
Q Consensus 296 ~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~d-----------g~i~ 352 (434)
++++.|+.++ .|.+||.....-.......+........++.. ++++++.|+.+ ..+.
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~ 491 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE 491 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE
Confidence 7788877532 67788765332111100111111112233344 78888988854 4689
Q ss_pred EEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 353 VWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 353 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
+||..+. .+..+..+........+..+.|+ +++++.||.
T Consensus 492 ~ydp~t~-~W~~~~~~~~~R~~hs~a~ll~d---------g~v~v~GG~ 530 (656)
T 1k3i_A 492 IYVPEQD-TFYKQNPNSIVRVYHSISLLLPD---------GRVFNGGGG 530 (656)
T ss_dssp EEEGGGT-EEEECCCCSSCCCTTEEEEECTT---------SCEEEEECC
T ss_pred EEcCCCC-ceeecCCCCCccccccHhhcCCC---------cEEEecCCC
Confidence 9999875 33333322222222233445567 889999885
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.51 E-value=0.00051 Score=61.16 Aligned_cols=235 Identities=10% Similarity=-0.001 Sum_probs=136.5
Q ss_pred cccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCcee
Q 046226 92 DGQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKH 167 (434)
Q Consensus 92 ~~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~ 167 (434)
.+..+|.+. ...+|+.+. ...|+..++........+.. ......++|++. .|+.+. ..+.|..+++........
T Consensus 33 ~d~~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110 (349)
T ss_dssp TTSSCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCcccccccCceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE
Confidence 334456665 344555444 45688888766554443333 345789999863 555554 478888888765432211
Q ss_pred eEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcC
Q 046226 168 VKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVAD 246 (434)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 246 (434)
.. ........+++.+.+..|+ +-...+.|.+.+++.......+.........+++.|
T Consensus 111 ~~----------------------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp 168 (349)
T 3v64_C 111 VS----------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHP 168 (349)
T ss_dssp EC----------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEET
T ss_pred Ee----------------------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEec
Confidence 10 1223457888887655554 445567899999875443333333345678999998
Q ss_pred CC--eEEEEeCC-CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCccccccccc
Q 046226 247 DG--VLYSASDD-ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYG 322 (434)
Q Consensus 247 ~~--~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~ 322 (434)
.+ ++++-... +.|..+++. +..... ...........+++++++..|+.+ ...+.|..+|+.........
T Consensus 169 ~~g~ly~td~~~~~~I~r~~~d---G~~~~~---~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~- 241 (349)
T 3v64_C 169 MEGTIYWTDWGNTPRIEASSMD---GSGRRI---IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI- 241 (349)
T ss_dssp TTTEEEEEECSSSCEEEEEETT---SCSCEE---SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-
T ss_pred CcCeEEEeccCCCCEEEEEeCC---CCCcEE---EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEE-
Confidence 54 44444444 778888776 111111 111223457899999876666555 45678999998643221111
Q ss_pred CcccCcccceEEEEeeCC-EEEEecCCCcEEEEeccCCC
Q 046226 323 GALQGHTHAVMCLASVAN-YVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 323 ~~~~~~~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~ 360 (434)
.........+++.++ .+++-...+.|..++..++.
T Consensus 242 ---~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 242 ---SQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp ---CSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ---eCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 111223455665555 55555567888888866663
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=0.00013 Score=66.95 Aligned_cols=149 Identities=9% Similarity=0.060 Sum_probs=88.2
Q ss_pred EEEEEEeC-C--EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE
Q 046226 135 VVAMEVSH-D--RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 135 v~~l~~~~-~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
...|+++| + .|+++...+.|+.+|+......... ........++|++++++|++
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-----------------------~~~~~P~~ia~d~~G~~lyv 195 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-----------------------SGLSKVRTICWTHEADSMII 195 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-----------------------CCCSCEEEEEECTTSSEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-----------------------cCCCCcceEEEeCCCCEEEE
Confidence 46778886 2 6666665577777776543211111 23456789999999997776
Q ss_pred EecC-C----cEEEEEcCCCeeE--EEcccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCcceeEEEEEeccc
Q 046226 212 ASLD-K----TIKVWRIRDSKCI--ETIQAHSEPINALVVAD-DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAK 282 (434)
Q Consensus 212 ~~~d-g----~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 282 (434)
+... + .+.+.+. .+... ..+. .......+++.| ++ ++++-..++.|..+|.. .. ........ ..
T Consensus 196 ad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~---~~-~~~~~~~~-~~ 268 (430)
T 3tc9_A 196 TNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT---TQ-ETTPLFTI-QD 268 (430)
T ss_dssp EECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT---TT-EEEEEEEC-SS
T ss_pred EeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC---CC-cEEEEEEc-CC
Confidence 6542 2 2333443 23211 2222 123456788999 66 45555567889999876 11 11111122 12
Q ss_pred ccCeEEEEEecCCCEEEE-EcCCCeEEEEEcC
Q 046226 283 YSPVKTLTLTLDDGLLYG-GCTDGYIHYWHKG 313 (434)
Q Consensus 283 ~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~ 313 (434)
......++++|++++|+. -...+.|..++..
T Consensus 269 ~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 269 SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 245678999999995544 4567899998865
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.47 E-value=0.00054 Score=59.76 Aligned_cols=227 Identities=9% Similarity=-0.002 Sum_probs=122.8
Q ss_pred ceeEeeccCCCccEEEEEEeCC-EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEE
Q 046226 122 FTECGRLKAKTSMVVAMEVSHD-RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITS 199 (434)
Q Consensus 122 ~~~~~~~~~~~~~v~~l~~~~~-~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 199 (434)
.+.+..+... .....++|+++ .|+.+. .++.|..||.... ..... ........
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-----------------------~~~~~p~g 76 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-----------------------TVEGKVSG 76 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-----------------------ECSSEEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-----------------------eCCCCcee
Confidence 4445555432 45778899886 455554 5788888886532 11111 12235788
Q ss_pred EEEecCCCEEEEEecCC--cEEEEEcCCCeeEEEccc-CccCeEEEEEcCCCe-EEEEeCCCeEEEEecccccCcceeEE
Q 046226 200 IAINVSDDTLYSASLDK--TIKVWRIRDSKCIETIQA-HSEPINALVVADDGV-LYSASDDATVRVWRRYFYSENQLHTL 275 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~ 275 (434)
+++.++++++++..... .|..+|..+++....... .......++..+++. +++-..++.|.++|.... ....
T Consensus 77 ia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~----~~~v 152 (306)
T 2p4o_A 77 LAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP----SGSI 152 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT----EEEE
T ss_pred EEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC----cEeE
Confidence 99999998665554322 477778777765332221 122334555566664 444446888888886410 0111
Q ss_pred EEE--------ecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcccCcccce--EEEEeeCCEEEE
Q 046226 276 ILT--------LTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQGHTHAV--MCLASVANYVIS 344 (434)
Q Consensus 276 ~~~--------~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~s 344 (434)
... ..........+ +++++.|+++ ...+.|..||+... ........+. ..... .++..+|+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~-g~~~~~~~~~-~~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST-DKPGEPEIFV-EQTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT-SCBCCCEEEE-ESCCCSSEEEBTTCCEEEE
T ss_pred EEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC-CCCCccEEEe-ccCCCCCeEECCCCCEEEE
Confidence 100 00111234455 7888766555 55789999998641 1110000000 00112 334445777777
Q ss_pred ecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEe---ec
Q 046226 345 GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF---LG 383 (434)
Q Consensus 345 ~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~---~~ 383 (434)
....+.|.++|.. + ....+..+.......++++|. |+
T Consensus 229 ~~~~~~V~~~~~~-G-~~~~~~~~~~~~~~p~~~a~~g~~~d 268 (306)
T 2p4o_A 229 THIYNSVVRIAPD-R-STTIIAQAEQGVIGSTAVAFGQTEGD 268 (306)
T ss_dssp CBTTCCEEEECTT-C-CEEEEECGGGTCTTEEEEEECCSTTT
T ss_pred eCCCCeEEEECCC-C-CEEEEeecccccCCceEEEEecccCC
Confidence 7778899999875 3 112232333333557889998 66
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.44 E-value=0.00043 Score=58.01 Aligned_cols=205 Identities=13% Similarity=0.034 Sum_probs=125.3
Q ss_pred CcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEccc-CccCeEEEEEcCCC-eEEEEeCCCeEEEEeccccc
Q 046226 192 KHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQA-HSEPINALVVADDG-VLYSASDDATVRVWRRYFYS 268 (434)
Q Consensus 192 ~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~ 268 (434)
+-...+..++++|+++.|+ +...++.|...|.. ++.+..+.. -......|++.+++ ++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4556799999999877665 46778899999997 887777642 22567889998888 44555567889998876322
Q ss_pred CcceeEEEE-Ee--cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccc--cccccCc----ccCcccceEEEEee-
Q 046226 269 ENQLHTLIL-TL--TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSA--QLQYGGA----LQGHTHAVMCLASV- 338 (434)
Q Consensus 269 ~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~----~~~~~~~v~~~~~~- 338 (434)
......... .+ ...+.....++|+|.++.|+++.+.....+|.++.... ....... -..+...+.+++++
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 101111111 11 12345678999999998888887766666666541100 0110000 00112235677776
Q ss_pred --CCEEEEecCCCcEEEEeccCCCceeeEEEee-ccc------cceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEe
Q 046226 339 --ANYVISGSADSTSRVWAREQDGRHTMLAVLV-GHR------GPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409 (434)
Q Consensus 339 --~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~h~------~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~ 409 (434)
+.+++.......+.++|.... ......+. +.. ..-..|++.++ |++.++ ++-+.++.+.
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~---------G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDAS---------GNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTT---------CCEEEE-ETTTEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCC---------CCEEEE-cCCceEEEEE
Confidence 447777777888999997642 23333443 221 14567999988 775555 6666555543
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.44 E-value=0.00052 Score=62.04 Aligned_cols=232 Identities=10% Similarity=0.002 Sum_probs=134.5
Q ss_pred EEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCceeeEe
Q 046226 95 ILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 95 v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~ 170 (434)
-.|.+. ...+|+.+. ...|+..++........+.. ......++|++. .|+.+. ..+.|..++...........
T Consensus 79 ~~C~~~~~~~~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~- 155 (386)
T 3v65_B 79 RSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS- 155 (386)
T ss_dssp SCEEECSSCCEEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-
T ss_pred CeECCccccceeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-
Confidence 345555 334555444 45788888876554443333 345789999863 555554 46888888876443111110
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG- 248 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~- 248 (434)
........+++.+.+..|+ +-...+.|.+.+++.......+.........+++.|.+
T Consensus 156 ---------------------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 156 ---------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp ---------------------SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ---------------------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC
Confidence 1223456788887655554 44556789998886544333333334567899999865
Q ss_pred eE-EEEeCC-CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcc
Q 046226 249 VL-YSASDD-ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGAL 325 (434)
Q Consensus 249 ~l-~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~ 325 (434)
.| ++-... +.|..+++. +...... ..........|++++++..|+.+ ...+.|..+|+.........
T Consensus 215 ~ly~td~~~~~~I~r~~~d---G~~~~~~---~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~---- 284 (386)
T 3v65_B 215 TIYWTDWGNTPRIEASSMD---GSGRRII---ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI---- 284 (386)
T ss_dssp EEEEEECSSSCEEEEEETT---SCSCEEE---ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE----
T ss_pred eEEEeccCCCCEEEEEeCC---CCCcEEE---EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE----
Confidence 44 444444 678888765 2111111 11223457899999866666555 45678999997643221111
Q ss_pred cCcccceEEEEeeCC-EEEEecCCCcEEEEeccCCC
Q 046226 326 QGHTHAVMCLASVAN-YVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 326 ~~~~~~v~~~~~~~~-~l~s~~~dg~i~iwd~~~~~ 360 (434)
.........+++.++ ++++-...+.|..++..++.
T Consensus 285 ~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 285 SQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp CSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 111223456666655 55566667889888866663
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.43 E-value=0.00069 Score=59.09 Aligned_cols=204 Identities=9% Similarity=-0.005 Sum_probs=114.4
Q ss_pred cceeeeEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEc--CC-e
Q 046226 80 SSYRCISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYG--DG-K 153 (434)
Q Consensus 80 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~--dg-~ 153 (434)
...+.+..+... .....+++ +++++++-..++.|..||.... ....+. .......+++.++ .++++.. ++ .
T Consensus 20 ~~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 20 APAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcce
Confidence 345555555322 45678888 6777777667899999997653 333222 2346888999886 4555543 22 3
Q ss_pred EEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee-EEEc
Q 046226 154 IRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC-IETI 232 (434)
Q Consensus 154 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~ 232 (434)
|..+|..+++...... .+ .......++..+++..+++-..++.|+++|..+++. +...
T Consensus 97 v~~~d~~~g~~~~~~~---~~------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~ 155 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLT---LP------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE 155 (306)
T ss_dssp EEEEECTTSCEEEEEE---CT------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCeEEEEEe---CC------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE
Confidence 5555654443211111 00 111223344444444444444588999999876531 2110
Q ss_pred ---------ccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE
Q 046226 233 ---------QAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 233 ---------~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 301 (434)
.......+.+ ++++ ++++-...+.|..+|+............... .....++++++|+++++.
T Consensus 156 ~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l~va~ 229 (306)
T 2p4o_A 156 HPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNLYGAT 229 (306)
T ss_dssp CGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCEEEEC
T ss_pred CCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCEEEEe
Confidence 0111234555 6666 4555567789999998621111111111111 345678999999887777
Q ss_pred cCCCeEEEEEcC
Q 046226 302 CTDGYIHYWHKG 313 (434)
Q Consensus 302 ~~dg~i~i~d~~ 313 (434)
...+.|.++|..
T Consensus 230 ~~~~~V~~~~~~ 241 (306)
T 2p4o_A 230 HIYNSVVRIAPD 241 (306)
T ss_dssp BTTCCEEEECTT
T ss_pred CCCCeEEEECCC
Confidence 778899999864
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.40 E-value=0.00067 Score=61.32 Aligned_cols=200 Identities=11% Similarity=-0.004 Sum_probs=119.8
Q ss_pred cCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccccC
Q 046226 193 HMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYFYSE 269 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~ 269 (434)
....+..++|.+.+..|+.. ...+.|..+++........+.........+++.+. + ++++-...+.|.+.++. +
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d---g 190 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD---G 190 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT---S
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC---C
Confidence 34457899999866666544 45678999998766543333333345567888864 4 55566667888888775 2
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcC-C-CeEEEEEcCcccccccccCcccCcccceEEEEee--CC-EEEE
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT-D-GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--AN-YVIS 344 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s 344 (434)
...... ..........++++|.+..|+.... . +.|..+++......... .........++++ +. ++++
T Consensus 191 ~~~~~l---~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 191 AHRKVL---LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA----DTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp CSCEEE---ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCEEEEEEEGGGTEEEEE
T ss_pred CceEEe---ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE----ECCCCCeeeEEEeCCCCEEEEE
Confidence 111111 2223356789999987766665543 4 68888887543221111 1112234667765 44 4555
Q ss_pred ecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 345 GSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 345 ~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
-...+.|..+|+..... . ..+.........+++. . +.++++-...+.|..++..+++.
T Consensus 264 D~~~~~I~~~d~dG~~~-~--~~~~~~~~~P~giav~-~---------~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 264 DAKHHVIERANLDGSHR-K--AVISQGLPHPFAITVF-E---------DSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp ETTTTEEEEECTTSCSC-E--EEECSSCSSEEEEEEE-T---------TEEEEEETTTTEEEEEETTTCCS
T ss_pred ECCCCEEEEEeCCCCee-E--EEEECCCCCceEEEEE-C---------CEEEEeeCCCCeEEEEECCCCcc
Confidence 55677899999875422 1 1222223345667773 3 55677777788888888655554
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.36 E-value=0.0011 Score=58.09 Aligned_cols=202 Identities=10% Similarity=-0.012 Sum_probs=118.1
Q ss_pred cCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCC----CeeEEEcccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecc
Q 046226 193 HMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRD----SKCIETIQAHSEPINALVVAD-DG-VLYSASDDATVRVWRRY 265 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~ 265 (434)
....+..++|++.++.|+.+ ..++.|..+++.. ......+.........+++.+ ++ ++++-...+.|.++|+.
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 34567899999876666554 4568999999875 222222322234567888885 44 55555677899999876
Q ss_pred cccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC--CeEEEEEcCcccccccccCcccCcccceEEEEee--CCE
Q 046226 266 FYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD--GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANY 341 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 341 (434)
+....... .........++++|.+..|+.+... +.|..+++....... +. ...-.....++++ ++.
T Consensus 108 ---g~~~~~~~---~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~-~~---~~~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 108 ---GVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-LV---TENIQWPNGITLDLLSGR 177 (316)
T ss_dssp ---SSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-EE---CSSCSCEEEEEEETTTTE
T ss_pred ---CCceEEEE---ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-EE---ECCCCCceEEEEeccCCE
Confidence 22222211 2233467899999976666555443 688888875332211 11 1112345667776 444
Q ss_pred -EEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 342 -VISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 342 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
+++-...+.|..+|+..... ..+......-.....+++. . +.++++-...+.|..++..+++.
T Consensus 178 lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~---------~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 178 LYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-E---------DKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-T---------TEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-C---------CEEEEEECCCCeEEEEeCCCCcc
Confidence 44555667999999875322 2222221122335667774 3 55677777788899888766654
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.35 E-value=0.0011 Score=57.96 Aligned_cols=226 Identities=14% Similarity=0.062 Sum_probs=130.8
Q ss_pred EEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCC---CCceeeEeeeccCCC
Q 046226 104 FIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWD---NGVKHVKLATIPKTG 177 (434)
Q Consensus 104 ~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~---~~~~~~~~~~~~~~~ 177 (434)
+|+.+.. ..|+..|+.+.+....+.. -.....++|++. .|+.+.. ++.|..+++... .....+
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--------- 71 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--------- 71 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE---------
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE---------
Confidence 3444443 5688888887665544443 445789999874 5655544 688888887642 111111
Q ss_pred CceeEEEeccccccCcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeC
Q 046226 178 GAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASD 255 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~ 255 (434)
. .........+++.+.+..|+ +-..++.|.+.|+........+.........+++.|.+ .|+.+..
T Consensus 72 ------~------~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 72 ------I------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp ------E------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred ------E------eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEcc
Confidence 0 01223457888887555555 44567899999987543333333334567899999854 4444443
Q ss_pred -C-CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCcccccccccCcccCcccce
Q 046226 256 -D-ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSAQLQYGGALQGHTHAV 332 (434)
Q Consensus 256 -d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 332 (434)
. +.|...++. +.... .+ ..........+++++++..|+.+. ..+.|..+|+...... .+. .........
T Consensus 140 ~~~~~I~~~~~d---G~~~~-~~--~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~~~-~~~~~~~~P 211 (316)
T 1ijq_A 140 GTPAKIKKGGLN---GVDIY-SL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TIL-EDEKRLAHP 211 (316)
T ss_dssp SSSCEEEEEETT---SCCEE-EE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-ECTTTTSSE
T ss_pred CCCCeEEEEcCC---CCCeE-EE--EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-EEe-ecCCccCCc
Confidence 3 678888765 22111 11 112334678999998777666554 5679999998642221 111 111112234
Q ss_pred EEEEeeCC-EEEEecCCCcEEEEeccCCC
Q 046226 333 MCLASVAN-YVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 333 ~~~~~~~~-~l~s~~~dg~i~iwd~~~~~ 360 (434)
..+++++. ++++-...+.|..++..++.
T Consensus 212 ~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 212 FSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 56666655 55555567889999987663
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.0015 Score=58.17 Aligned_cols=199 Identities=10% Similarity=-0.006 Sum_probs=119.4
Q ss_pred CCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccccCc
Q 046226 194 MGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
...+..++|++.++.|+.. ...+.|..+++........+.........+++.+. + ++++-...+.|.+.++. +.
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d---G~ 148 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD---GA 148 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT---SC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC---CC
Confidence 3457899999876666655 45688999998766543333333345578888864 4 55666667889999876 22
Q ss_pred ceeEEEEEecccccCeEEEEEecCCCEEEEEc-CC-CeEEEEEcCcccccccccCcccCcccceEEEEee--CC-EEEEe
Q 046226 271 QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TD-GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--AN-YVISG 345 (434)
Q Consensus 271 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~ 345 (434)
... .. ..........++++|.+..|+... .. +.|..+++......... .........++++ +. +.++-
T Consensus 149 ~~~-~l--~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 149 HRK-VL--LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA----DTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp SCE-EE--ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC----CSSCSCEEEEEEETTTTEEEEEE
T ss_pred ceE-EE--EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE----ECCCCCcceEEEeCCCCEEEEEE
Confidence 111 11 222335678999999666555544 44 78888887643221111 1122345667775 44 44455
Q ss_pred cCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 346 SADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 346 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
...+.|..+|+..... .. .+.........+++. . +.+.++-...+.|...+..+++.
T Consensus 222 ~~~~~I~~~~~dG~~~-~~--~~~~~~~~P~giav~-~---------~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 222 AKHHVIERANLDGSHR-KA--VISQGLPHPFAITVF-E---------DSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp TTTTEEEEEETTSCSC-EE--EECSSCSSEEEEEEE-T---------TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCEEEEEeCCCCce-EE--EEeCCCCCceEEEEE-C---------CEEEEecCCCCeEEEEEccCCCc
Confidence 5667899999875422 11 122223445667773 3 55666666778888887555554
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.0018 Score=58.80 Aligned_cols=230 Identities=14% Similarity=0.098 Sum_probs=134.0
Q ss_pred CEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCc
Q 046226 103 GFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGA 179 (434)
Q Consensus 103 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 179 (434)
.+|+.+. ...|+..++........+. ....+..|+|++. .|+.+. ..+.|..+++.........
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~----------- 150 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY----------- 150 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCC-----------
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcc-----------
Confidence 3444444 4678888887655444333 3456889999973 566554 4678888887542210000
Q ss_pred eeEEEeccccccCcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEe--C
Q 046226 180 VRNLIVGKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSAS--D 255 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~--~ 255 (434)
..+. .........+++.+.+..|+ +-...+.|.+.+++.......+.........|++.|.+ .|+... .
T Consensus 151 -~~~~------~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 151 -DTVI------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp -EEEE------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS
T ss_pred -eEEE------eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC
Confidence 0000 01334577899987555454 54567889999987654444444344567899999854 544443 2
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCcccccccccCcccCcccceEE
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMC 334 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 334 (434)
.+.|...++. +...... ..........|++++++..|+.+. ..+.|..+|+......... ..........+
T Consensus 224 ~~~I~~~~~d---G~~~~~~---~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~l~~P~g 295 (400)
T 3p5b_L 224 PAKIKKGGLN---GVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL--EDEKRLAHPFS 295 (400)
T ss_dssp SCCEEEEETT---SCSCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE--ECSSTTSSEEE
T ss_pred CCEEEEEeCC---CCccEEE---EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE--eCCCCCCCCEE
Confidence 4678888776 2222111 122335678999998777776664 5678999998643222111 11112233456
Q ss_pred EEeeCC-EEEEecCCCcEEEEeccCCC
Q 046226 335 LASVAN-YVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 335 ~~~~~~-~l~s~~~dg~i~iwd~~~~~ 360 (434)
++..++ ++++-...+.|..+|..++.
T Consensus 296 l~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 296 LAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred EEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 666655 55566667889999977763
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.29 E-value=0.00014 Score=72.01 Aligned_cols=196 Identities=13% Similarity=0.065 Sum_probs=108.4
Q ss_pred CeEEEEEe-cCCCEEEEEec-CC----cEEEEEcCCC-eeEEEcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEE
Q 046226 196 PITSIAIN-VSDDTLYSASL-DK----TIKVWRIRDS-KCIETIQAHSEPINALVVADDG-VLYSASDD-----ATVRVW 262 (434)
Q Consensus 196 ~v~~~~~~-~~~~~l~s~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iw 262 (434)
.+...+|+ |||++|+.+.. +| .|+++|+.++ +.+... -......+.|+||+ .|+....| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999 99998885533 23 5999999998 632110 01123568899998 55555544 257777
Q ss_pred ecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEc---CCCeEEEEEcCcccccc--cccCcccCcccceEEEEe
Q 046226 263 RRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGC---TDGYIHYWHKGWFSAQL--QYGGALQGHTHAVMCLAS 337 (434)
Q Consensus 263 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~v~~~~~ 337 (434)
++.. .......+... ........+.|+|||++|+... ....|.++|+....... .. .............|
T Consensus 253 ~lgt--~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~--l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 253 VMGK--LQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEI--VRPREKGVRYDVQM 327 (751)
T ss_dssp ETTS--CGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEE--SSCCCTTCCEEEEE
T ss_pred ECCC--CchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEE--eecCCCCceEEEee
Confidence 7652 11111222221 2223456789999999888765 34578888886542222 11 11223344555553
Q ss_pred -eCCEEEEec-CC----CcEEEEeccCCCceeeEEEeecccc--ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEe
Q 046226 338 -VANYVISGS-AD----STSRVWAREQDGRHTMLAVLVGHRG--PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWR 409 (434)
Q Consensus 338 -~~~~l~s~~-~d----g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~ 409 (434)
.++.|+..+ .+ ..|..+++.+....... +..|.. .+..+.+. . +.++++...||..++|-
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~~--~--------~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAVR--S--------NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEEC--S--------SEEEEEEEETTEEEEEE
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEEE--C--------CEEEEEEEeCCEEEEEE
Confidence 366544433 33 25666676542221220 223333 34444443 1 56777888888765554
Q ss_pred c
Q 046226 410 V 410 (434)
Q Consensus 410 ~ 410 (434)
+
T Consensus 396 ~ 396 (751)
T 2xe4_A 396 M 396 (751)
T ss_dssp E
T ss_pred E
Confidence 3
No 277
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.28 E-value=0.0017 Score=57.11 Aligned_cols=234 Identities=7% Similarity=-0.004 Sum_probs=123.3
Q ss_pred cccEEEEEEcCCEEEEEeCCCeEEEec--CCCceeEeeccCCCccEEEEEEeC-CEEEEEEcCCeEEEeecCCCCCceee
Q 046226 92 DGQILCIAVGNGFIYTGSDSNVIRIWK--QPEFTECGRLKAKTSMVVAMEVSH-DRVYAAYGDGKIRVWRSTWDNGVKHV 168 (434)
Q Consensus 92 ~~~v~~~~~~~~~l~tg~~dg~i~iwd--~~~~~~~~~~~~~~~~v~~l~~~~-~~l~~~s~dg~i~vwd~~~~~~~~~~ 168 (434)
...+.++.++.+.++.++.++.|..-. -++.+.+.....+...+..+.+.+ +.+++++.+|.|..- .+.++.-...
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~ 157 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQAL 157 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEE
T ss_pred CccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEe
Confidence 446888888444455556667555432 122333322222334577777654 466666666654321 1112221111
Q ss_pred EeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEE-EEc--CCCeeEEEcccCccCeEEEEEc
Q 046226 169 KLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKV-WRI--RDSKCIETIQAHSEPINALVVA 245 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~v-wd~--~~~~~~~~~~~~~~~v~~~~~~ 245 (434)
. ......+..+++.+++.+++++. +|.+.. +|- .+.+.+. ......+..+.+.
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~ 213 (327)
T 2xbg_A 158 V---------------------QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFT 213 (327)
T ss_dssp E---------------------CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEEC
T ss_pred e---------------------cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEEC
Confidence 1 02445688899999888777665 454444 442 2333332 2345678889998
Q ss_pred CCCeEEEEeCCCeEEEEecccccCcceeEEEEEe-cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCc
Q 046226 246 DDGVLYSASDDATVRVWRRYFYSENQLHTLILTL-TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGA 324 (434)
Q Consensus 246 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 324 (434)
+++.++.++.+|.+++.+.. ........... ......+..+.+.+++..++++. +|.|.. ..+.. ........
T Consensus 214 ~~g~~~~~~~~G~~~~s~~D---~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~-S~DgG-~tW~~~~~ 287 (327)
T 2xbg_A 214 PDGRLWMIVNGGKIAFSDPD---NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLC-SQDGG-QTWQQDVD 287 (327)
T ss_dssp TTSCEEEEETTTEEEEEETT---EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEE-ESSTT-SSCEECGG
T ss_pred CCCCEEEEeCCceEEEecCC---CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEE-eCCCC-cccEEcCc
Confidence 88866677778888776321 01111111100 01223578888988777666654 666633 32211 22222111
Q ss_pred ccCcccceEEEEe-eCCEEEEecCCCcEEEEec
Q 046226 325 LQGHTHAVMCLAS-VANYVISGSADSTSRVWAR 356 (434)
Q Consensus 325 ~~~~~~~v~~~~~-~~~~l~s~~~dg~i~iwd~ 356 (434)
.......+.++.+ ++..+++++.+|.|.-++-
T Consensus 288 ~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 288 VKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp GTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred cCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 1112234556666 4667777788998777654
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.27 E-value=0.00091 Score=61.37 Aligned_cols=235 Identities=10% Similarity=0.037 Sum_probs=124.0
Q ss_pred EEEEEEeC----CEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEE
Q 046226 135 VVAMEVSH----DRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLY 210 (434)
Q Consensus 135 v~~l~~~~----~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 210 (434)
...|++++ +.|+.+...+.|+.+|...+...... ........++++++++ |+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-----------------------~~~~~P~giavd~dG~-ly 196 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-----------------------TNIGQCADVNFTLNGD-MV 196 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-----------------------CCCSCEEEEEECTTCC-EE
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-----------------------cCCCCccEEEECCCCC-EE
Confidence 45778886 35666655577777776533221111 2344588999999999 55
Q ss_pred EEecCC-----cEEEEEcCCCee-EEEcccCccCeEEEEEcC-CCeEE-EEeCCCeEEEEecccccCcceeEEEEEeccc
Q 046226 211 SASLDK-----TIKVWRIRDSKC-IETIQAHSEPINALVVAD-DGVLY-SASDDATVRVWRRYFYSENQLHTLILTLTAK 282 (434)
Q Consensus 211 s~~~dg-----~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~-~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 282 (434)
.+...+ .+...+...+.. ...+. .......+++.+ ++.|+ +-..++.|+.+|.. .. ......... ..
T Consensus 197 Vad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~--~g-~~~~~~~~~-~~ 271 (433)
T 4hw6_A 197 VVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA--TG-TLTEEEVMM-DT 271 (433)
T ss_dssp EEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT--TC-CEEEEEEEC-SC
T ss_pred EEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC--CC-eEEEEEecc-CC
Confidence 554322 233333322111 01111 223456788898 66444 44567889888865 11 111111111 11
Q ss_pred ccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCccccccc----ccCc--ccC---------cccceEEEEe---------
Q 046226 283 YSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQ----YGGA--LQG---------HTHAVMCLAS--------- 337 (434)
Q Consensus 283 ~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~----~~~~--~~~---------~~~~v~~~~~--------- 337 (434)
......++++|++++|+.+ ...+.|+.+++........ +... ..+ .-.....+++
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~d 351 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGE 351 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTS
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccccc
Confidence 2233469999999955554 5578999988653211110 0000 000 1122455666
Q ss_pred e--CCEEEEecCCCcEEEEeccCCCceeeEEEeecc------------------ccceeEEEEeecccCCCCCCcccEEE
Q 046226 338 V--ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH------------------RGPIRCAIAFLGRFGEETEDEYCTIC 397 (434)
Q Consensus 338 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~~~~~~~~~l~ 397 (434)
+ ++++++-...+.|+.++. ++ . +..+.+. -.....|++.|.. +.+++
T Consensus 352 d~~g~lyvaD~~n~~I~~~~~-~G---~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~--------g~lyV 418 (433)
T 4hw6_A 352 EDEYDFYFCDRDSHTVRVLTP-EG---R-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR--------KCFYI 418 (433)
T ss_dssp SCCEEEEEEETTTTEEEEECT-TS---E-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT--------TEEEE
T ss_pred CCCCcEEEEECCCCEEEEECC-CC---C-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC--------CEEEE
Confidence 4 345566666778888874 33 2 2222211 1235677887331 66666
Q ss_pred EeecCCeEEEEecC
Q 046226 398 TGSLDGVLKMWRVT 411 (434)
Q Consensus 398 s~~~Dg~v~iw~~~ 411 (434)
+=...+.|+..+++
T Consensus 419 aD~~n~rIr~i~~e 432 (433)
T 4hw6_A 419 GDCDNHRVRKIAPE 432 (433)
T ss_dssp EEGGGTEEEEEEEC
T ss_pred EeCCCCEEEEEecC
Confidence 66667788877764
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.25 E-value=0.0019 Score=56.49 Aligned_cols=218 Identities=12% Similarity=0.076 Sum_probs=127.5
Q ss_pred CCeEEEecCCCce--eEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEe
Q 046226 111 SNVIRIWKQPEFT--ECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIV 185 (434)
Q Consensus 111 dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (434)
...|+..++.... ....+. .......++|++. .|+.+. ..+.|..++............
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~--------------- 75 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--------------- 75 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE---------------
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc---------------
Confidence 4678888887643 111111 2234678889863 555554 467888888765422111100
Q ss_pred ccccccCcCCCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-CeEEEEe--CCCeEEE
Q 046226 186 GKDKMMKHMGPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSAS--DDATVRV 261 (434)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~--~dg~i~i 261 (434)
........+++.+.+..|+ +-...+.|.+++++.......+.........+++.|. +.|+.+. ..+.|..
T Consensus 76 ------~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 76 ------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp ------ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred ------CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEE
Confidence 1223466788887555554 4455678999998654332223334456789999985 4555444 3577888
Q ss_pred EecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC
Q 046226 262 WRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN 340 (434)
Q Consensus 262 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 340 (434)
.++. +...... ....-.....+++++++..|+.+ ...+.|..+|+....... +. .+.......++++++
T Consensus 150 ~~~d---G~~~~~~---~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~-~~---~~~~~~P~glav~~~ 219 (318)
T 3sov_A 150 AGMD---GSSRFII---INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA-VV---KGSLPHPFALTLFED 219 (318)
T ss_dssp EETT---SCSCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EE---CSCCSCEEEEEEETT
T ss_pred EEcC---CCCeEEE---EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE-Ee---cCCCCCceEEEEeCC
Confidence 8765 2111111 11223456899999976666655 457889999986422221 11 112234466666655
Q ss_pred -EEEEecCCCcEEEEeccCCC
Q 046226 341 -YVISGSADSTSRVWAREQDG 360 (434)
Q Consensus 341 -~l~s~~~dg~i~iwd~~~~~ 360 (434)
++++-...+.|..++..+++
T Consensus 220 ~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 220 ILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEecCCCeEEEEECCCCC
Confidence 55555667889999987764
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.25 E-value=0.0014 Score=54.85 Aligned_cols=204 Identities=11% Similarity=0.062 Sum_probs=128.5
Q ss_pred EeeccccEEEEEE--cCC-EEEEEeCCCeEEEecCCCceeEeeccC-CCccEEEEEEeCC-EEEEEE-cCCeEEEeecCC
Q 046226 88 VLKKDGQILCIAV--GNG-FIYTGSDSNVIRIWKQPEFTECGRLKA-KTSMVVAMEVSHD-RVYAAY-GDGKIRVWRSTW 161 (434)
Q Consensus 88 ~~~h~~~v~~~~~--~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~-~l~~~s-~dg~i~vwd~~~ 161 (434)
+.+-.+.+..+++ +++ ++++...++.|...|.. ++.+..+.- .......|++.++ .++.+. .++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 3344467999999 344 55567778899999987 777777632 2245788888876 554554 477899998876
Q ss_pred CCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC---CeeEEEcc-----
Q 046226 162 DNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD---SKCIETIQ----- 233 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~----- 233 (434)
...+........+. .....+.....++|+|.++.|+++.+.....+|.+.. ...+..+.
T Consensus 101 ~~~i~~~~~~~~~~-------------~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~ 167 (255)
T 3qqz_A 101 NSEVKILKKIKIPL-------------QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQ 167 (255)
T ss_dssp TCCEEEEEEEECCC-------------SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHH
T ss_pred CCeeeeeeeecccc-------------ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhc
Confidence 55432222211110 0013456689999999998888887766656665541 11122221
Q ss_pred --cCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEec-cc------ccCeEEEEEecCCCEEEEEc
Q 046226 234 --AHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLT-AK------YSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 234 --~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~l~~~~ 302 (434)
.+...+.+++++|.. +++.......|.++|.. +. ......+. +. ......|+|.++|++.++ +
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~---g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-s 241 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV---GE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-S 241 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT---CC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-E
T ss_pred cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC---CC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-c
Confidence 123457899999877 67777778889999876 21 22222333 11 136789999999985554 6
Q ss_pred CCCeEEEEE
Q 046226 303 TDGYIHYWH 311 (434)
Q Consensus 303 ~dg~i~i~d 311 (434)
+...++.|.
T Consensus 242 E~n~~y~f~ 250 (255)
T 3qqz_A 242 EPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEE
T ss_pred CCceEEEEE
Confidence 667666664
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.25 E-value=0.00078 Score=58.72 Aligned_cols=192 Identities=10% Similarity=0.153 Sum_probs=117.2
Q ss_pred CCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCE--------EEEEEc----CCeEEEeecCCCC-Cceee
Q 046226 102 NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDR--------VYAAYG----DGKIRVWRSTWDN-GVKHV 168 (434)
Q Consensus 102 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~--------l~~~s~----dg~i~vwd~~~~~-~~~~~ 168 (434)
..+++.....+-+.+||+ +++.+..+.. +.++.+..-|+. ++.++. +++|.+|++.... .+..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345565667789999999 8888888764 567777777653 444443 4789999774221 12211
Q ss_pred EeeeccCCCCceeEEEeccccccCcCCCeEEEEE--ecC-CC-EEEEEecCCcEEEEEcC-------CCeeEEEcccCcc
Q 046226 169 KLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI--NVS-DD-TLYSASLDKTIKVWRIR-------DSKCIETIQAHSE 237 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~-~l~s~~~dg~i~vwd~~-------~~~~~~~~~~~~~ 237 (434)
.....+ + ..-...+..+|+ ++. +. ++++...+|.+..|++. +.+.++++.. ..
T Consensus 117 ~~~~~p-----v----------~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gs 180 (355)
T 3amr_A 117 TDPDHP-----I----------ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NS 180 (355)
T ss_dssp SCTTSC-----E----------ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SS
T ss_pred cccccC-----c----------CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CC
Confidence 000000 0 001145666777 564 43 67788889999999983 3456777764 34
Q ss_pred CeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcceeEEEEEec--ccccCeEEEEEe--cCCC-EEEEEc-CCCeEEEE
Q 046226 238 PINALVVADDG-VLYSASDDATVRVWRRYFYSENQLHTLILTLT--AKYSPVKTLTLT--LDDG-LLYGGC-TDGYIHYW 310 (434)
Q Consensus 238 ~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~--~~~~-~l~~~~-~dg~i~i~ 310 (434)
.+..+...+.. .|+.+-++.-|..+|.+.... .....+.... .....+..|++- ++++ +|++++ .+....+|
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CcceEEEcCCCCeEEEecccceEEEEeCCcCCC-CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 67778887665 999999986665555431111 1223333331 222468888884 4555 566555 57799999
Q ss_pred EcC
Q 046226 311 HKG 313 (434)
Q Consensus 311 d~~ 313 (434)
|..
T Consensus 260 dr~ 262 (355)
T 3amr_A 260 DRQ 262 (355)
T ss_dssp ESS
T ss_pred ECC
Confidence 974
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.17 E-value=0.0038 Score=56.61 Aligned_cols=203 Identities=10% Similarity=-0.013 Sum_probs=120.5
Q ss_pred cCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCC----eeEEEcccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecc
Q 046226 193 HMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDS----KCIETIQAHSEPINALVVAD-DG-VLYSASDDATVRVWRRY 265 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~ 265 (434)
....+..++|++.+..|+.+ ...+.|+.+++... .....+.........+++.. .+ ++++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 45678899999876666655 45678999998652 22233333445677889886 44 55566677889998876
Q ss_pred cccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC--CCeEEEEEcCcccccccccCcccCcccceEEEEee--CCE
Q 046226 266 FYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT--DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANY 341 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 341 (434)
+...... ..........|+++|.+.+|+.... .+.|...++......... ...-.....++++ +..
T Consensus 190 ---g~~~~~l---~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~----~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 190 ---GVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----TENIQWPNGITLDLLSGR 259 (400)
T ss_dssp ---TCSEEEE---EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE----CSSCSCEEEEEEETTTTE
T ss_pred ---CCceEEE---EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE----ECCCCceEEEEEEeCCCE
Confidence 2222221 1223345789999997666666543 378888887643222111 1122345667776 444
Q ss_pred E-EEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 342 V-ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 342 l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
| ++-...+.|..+|+..... ..+....+.-.....+++.. +.++++-...+.|..++..+++..
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~~----------~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 260 LYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE----------DKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEET----------TEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEeC----------CEEEEecCCCCeEEEEEcCCCCce
Confidence 4 4445567899999875432 22222212223345666632 456667777788988887666544
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.12 E-value=0.009 Score=58.99 Aligned_cols=237 Identities=16% Similarity=0.113 Sum_probs=133.8
Q ss_pred EEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCCCceeeEee
Q 046226 96 LCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 96 ~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~~~~~~~~~ 171 (434)
+|.+. ...+|+... ...|+..++........+. ....+..|+|++. .|+.+.. .+.|+.+++..........
T Consensus 388 ~C~~~~~~p~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~-- 463 (791)
T 3m0c_C 388 ACKAVGSIAYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-- 463 (791)
T ss_dssp CCEETTSCCEEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--
T ss_pred eeeeccccccccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCccee--
Confidence 34444 233444443 4567777876654433333 3456788999873 5555544 6778888775421100000
Q ss_pred eccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-e
Q 046226 172 TIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-V 249 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 249 (434)
.+. .........|++.+.++.|+.+ ...+.|.+.++........+.........|++.|.+ .
T Consensus 464 ----------~vi------~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 464 ----------TVI------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp ----------EEE------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred ----------EEE------ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCC
Confidence 000 0133456788998877655544 557899999987554333333344567899999864 5
Q ss_pred EEEEe-C-CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCccc
Q 046226 250 LYSAS-D-DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQ 326 (434)
Q Consensus 250 l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~ 326 (434)
|+... . .+.|...++. +.....+ ..........|++++.+..|+.+ ...+.|..+++......... ...
T Consensus 528 LYwtD~g~~~~I~~~~~d---G~~~~~l---v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~--~~~ 599 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLN---GVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL--EDE 599 (791)
T ss_dssp EEEEECSSSCEEEEEETT---SCCEEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--ECT
T ss_pred EEEecCCCCCeEEEEecC---CCceEEE---EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe--cCC
Confidence 54443 3 3678888776 2222111 22233568899999876666665 44678999998643322211 111
Q ss_pred CcccceEEEEeeCCEEE-EecCCCcEEEEeccCCC
Q 046226 327 GHTHAVMCLASVANYVI-SGSADSTSRVWAREQDG 360 (434)
Q Consensus 327 ~~~~~v~~~~~~~~~l~-s~~~dg~i~iwd~~~~~ 360 (434)
.......+|+..+++|+ +-...+.|...|..++.
T Consensus 600 ~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 600 KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 11223456777766544 44556788888877763
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.11 E-value=0.00029 Score=68.65 Aligned_cols=205 Identities=10% Similarity=0.020 Sum_probs=104.3
Q ss_pred CCeEEEEEecCCCEEEEEec-CCcEEEEEcCCCeeEEEcccCcc-CeEEEEEcCCC-eEEEEe-CC-----CeEEEEecc
Q 046226 195 GPITSIAINVSDDTLYSASL-DKTIKVWRIRDSKCIETIQAHSE-PINALVVADDG-VLYSAS-DD-----ATVRVWRRY 265 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~-~l~s~~-~d-----g~i~iwd~~ 265 (434)
....++++..++++++.|+. +..+.+||..+.+-...-..+.. .-.+++..+++ +++.|+ .+ ..+.+||..
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 33445677789999999884 45899999987653322111211 12345566566 777777 34 468899976
Q ss_pred cccCcceeEEEEEe--cccccCeEEEEEecCCCEEEEEcCCC---------eEEEEEcCcccccccccCcccC------c
Q 046226 266 FYSENQLHTLILTL--TAKYSPVKTLTLTLDDGLLYGGCTDG---------YIHYWHKGWFSAQLQYGGALQG------H 328 (434)
Q Consensus 266 ~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~------~ 328 (434)
. .....+... ......-....+..++..++.|+.+| .+..||.....-.... ..... .
T Consensus 323 t----~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~-~~~~~~~~~~~~ 397 (656)
T 1k3i_A 323 S----KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA-GKRQSNRGVAPD 397 (656)
T ss_dssp T----TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE-EECEETTEECCC
T ss_pred C----CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC-CccccccccCCC
Confidence 1 122221000 00000000011223444445554443 5677876543211110 00000 0
Q ss_pred ccceEEEE---eeCCEEEEecCCC-----------cEEEEeccCCCceeeEEEeeccccce-eEEEEeecccCCCCCCcc
Q 046226 329 THAVMCLA---SVANYVISGSADS-----------TSRVWAREQDGRHTMLAVLVGHRGPI-RCAIAFLGRFGEETEDEY 393 (434)
Q Consensus 329 ~~~v~~~~---~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~~~~~ 393 (434)
...-.++. .++++++.|+.++ .|.+||..+.. +..+..-..+.... .+++..|+ +
T Consensus 398 ~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~mp~~R~~~~~~~l~~---------g 467 (656)
T 1k3i_A 398 AMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLPD---------G 467 (656)
T ss_dssp CBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECTT---------S
T ss_pred CCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC-eeEEccCCCCCCcccCCeEECCC---------C
Confidence 01112332 2466888887543 67888887652 22221001122222 34455666 8
Q ss_pred cEEEEeecC-----------CeEEEEecCCCC
Q 046226 394 CTICTGSLD-----------GVLKMWRVTRPK 414 (434)
Q Consensus 394 ~~l~s~~~D-----------g~v~iw~~~~~~ 414 (434)
++++.||.+ ..+.+||..+.+
T Consensus 468 ~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 468 STFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 899999865 568999987654
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.07 E-value=0.011 Score=58.38 Aligned_cols=203 Identities=10% Similarity=-0.025 Sum_probs=116.8
Q ss_pred cCCCeEEEEEecCCCEEEE-EecCCcEEEEEcCCC----eeEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecc
Q 046226 193 HMGPITSIAINVSDDTLYS-ASLDKTIKVWRIRDS----KCIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRY 265 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s-~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~ 265 (434)
....+..|+|.+....|+. -...+.|+.+++... .....+.........|++...+ ++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 4556788999986655554 445678999998752 2223333344556788888665 55566677899999886
Q ss_pred cccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC--CCeEEEEEcCcccccccccCcccCcccceEEEEee--CCE
Q 046226 266 FYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT--DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--ANY 341 (434)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 341 (434)
+.....+ ..........|+++|.+.+|+.... .+.|...++......... ...-.....|+++ +..
T Consensus 502 ---G~~~~~l---~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv----~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 502 ---GVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----TENIQWPNGITLDLLSGR 571 (791)
T ss_dssp ---SSSEEEE---EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE----CSSCSCEEEEEEETTTTE
T ss_pred ---CCeEEEE---EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE----eCCCCCceEEEEecCCCe
Confidence 2222222 1223346789999997666666543 268888887643322111 1122345667766 444
Q ss_pred E-EEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 342 V-ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 342 l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
| ++-...+.|..+++..... ..+..-.+.-....+|++.. +.++++-...+.|...+..+++..
T Consensus 572 LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~----------~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 572 LYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE----------DKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET----------TEEEEEETTTTEEEEEETTTCCCC
T ss_pred EEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeC----------CEEEEEECCCCEEEEEeCCCCcce
Confidence 4 4445567899999875432 22221111122334566542 345555556678888876666543
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.06 E-value=0.0046 Score=53.44 Aligned_cols=208 Identities=9% Similarity=0.056 Sum_probs=120.1
Q ss_pred CccEEEEEEeC--CEEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE---ecC
Q 046226 132 TSMVVAMEVSH--DRVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI---NVS 205 (434)
Q Consensus 132 ~~~v~~l~~~~--~~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~ 205 (434)
...-.+++|++ ..++.++ ..++|..||...+..... .+......+ .....+..|.| .|+
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g--------------~~~~~~sGl~~~~~D~~ 76 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNG--------------DGEQQMSGLSLLTHDNS 76 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSS--------------CCSEEEEEEEESSSSSC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccC--------------CCcceeeEEEEeccCCC
Confidence 33445678987 4777777 589999999764322211 110000000 01123578899 588
Q ss_pred CCEEEEEec-------------CCcEEEEEcC---CCeeEEEccc--C-----------ccCeEEEEEcCCC-eEEEEeC
Q 046226 206 DDTLYSASL-------------DKTIKVWRIR---DSKCIETIQA--H-----------SEPINALVVADDG-VLYSASD 255 (434)
Q Consensus 206 ~~~l~s~~~-------------dg~i~vwd~~---~~~~~~~~~~--~-----------~~~v~~~~~~~~~-~l~s~~~ 255 (434)
++++++... +..|..+|+. +++.+..... . ......++..++| ..++++.
T Consensus 77 grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~ 156 (334)
T 2p9w_A 77 KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL 156 (334)
T ss_dssp CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE
T ss_pred CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC
Confidence 767665432 6779999998 7776654431 1 1247899999999 6777777
Q ss_pred C-CeEEEEecccccCcceeEEEEEe--cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccc-cccc--C---ccc
Q 046226 256 D-ATVRVWRRYFYSENQLHTLILTL--TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ-LQYG--G---ALQ 326 (434)
Q Consensus 256 d-g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~--~---~~~ 326 (434)
. +.|...+.. +.......... .......+.|+++|+++.|++....|.|..+|+...... .... . .+.
T Consensus 157 ~~~~I~rV~pd---G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~ 233 (334)
T 2p9w_A 157 GMPAIARVSAD---GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLS 233 (334)
T ss_dssp SSCEEEEECTT---SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCT
T ss_pred CCCeEEEEeCC---CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCccccc
Confidence 7 777777654 11111111111 112234679999999999998877999999998732110 1000 0 111
Q ss_pred CcccceEEEEeeCCE-EEEecCCCcEEEEeccC
Q 046226 327 GHTHAVMCLASVANY-VISGSADSTSRVWAREQ 358 (434)
Q Consensus 327 ~~~~~v~~~~~~~~~-l~s~~~dg~i~iwd~~~ 358 (434)
+ ...+.....+|+. +++....+.+.+.+.+.
T Consensus 234 ~-~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 234 G-TEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp T-EEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred C-cccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 1 1222233446776 55555566666665544
No 287
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.05 E-value=0.0039 Score=54.21 Aligned_cols=154 Identities=10% Similarity=0.119 Sum_probs=79.7
Q ss_pred CCCEEEEEecC------CcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeC---------CCeEEEEeccc
Q 046226 205 SDDTLYSASLD------KTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASD---------DATVRVWRRYF 266 (434)
Q Consensus 205 ~~~~l~s~~~d------g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~---------dg~i~iwd~~~ 266 (434)
++..++.|+.+ ..+.+||..+.+-.. .+......- +++.. ++ +++.|+. -..+.+||+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~- 177 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPA- 177 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEESCTTTCEECCCEEEEETT-
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEEE-CCEEEEECCCCCCCCcccccceEEEeCCC-
Confidence 56677777755 468899988765322 222111111 22233 44 5555553 3457888876
Q ss_pred ccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCE
Q 046226 267 YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANY 341 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 341 (434)
......+..+....... +++.. ++++++.|+.+ ..+.+||+... .......+........++..++.+
T Consensus 178 ---~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i 250 (306)
T 3ii7_A 178 ---TETWTELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAVGSIV 250 (306)
T ss_dssp ---TTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEETTEE
T ss_pred ---CCeEEECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEECCEE
Confidence 12333332222211122 22222 56677777653 46888987643 222222222222233444556777
Q ss_pred EEEecCC-----CcEEEEeccCCCceeeEEEee
Q 046226 342 VISGSAD-----STSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 342 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~ 369 (434)
++.|+.+ ..+.+||+.+. .+..+..+.
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~ 282 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETD-KWVANSKVR 282 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTT-EEEEEEEEE
T ss_pred EEEeCcCCCeeeeeEEEEcCCCC-eEEeCCCcc
Confidence 7888754 46888998875 444544444
No 288
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.04 E-value=0.0029 Score=54.84 Aligned_cols=151 Identities=16% Similarity=0.124 Sum_probs=77.7
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCee--EEEcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEEecccccCcc
Q 046226 205 SDDTLYSASLD-----KTIKVWRIRDSKC--IETIQAHSEPINALVVADDG-VLYSASDD-----ATVRVWRRYFYSENQ 271 (434)
Q Consensus 205 ~~~~l~s~~~d-----g~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iwd~~~~~~~~ 271 (434)
++..++.|+.+ ..+.+||+.+.+- +..+......- +++.. ++ +++.|+.+ ..+.+||+. ..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~----~~ 185 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVVA-SGVIYCLGGYDGLNILNSVEKYDPH----TG 185 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETT----TT
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEEE-CCEEEEECCCCCCcccceEEEEeCC----CC
Confidence 56667777654 3688999877642 22332222222 22233 45 66666654 457888876 12
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEec
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGS 346 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~ 346 (434)
....+..+.........+. -++.+++.|+.+ ..+.+||+.... ......+........++..++.+++.|+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 186 HWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVLRGRLYAIAG 261 (301)
T ss_dssp EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred cEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEECCEEEEEcC
Confidence 3333322222211222222 256777777654 468899986432 2222222222222234445677777777
Q ss_pred CC-----CcEEEEeccCCCceeeEE
Q 046226 347 AD-----STSRVWAREQDGRHTMLA 366 (434)
Q Consensus 347 ~d-----g~i~iwd~~~~~~~~~~~ 366 (434)
.+ ..+.+||+++. .+..+.
T Consensus 262 ~~~~~~~~~v~~yd~~~~-~W~~~~ 285 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIID-SWEVVT 285 (301)
T ss_dssp BCSSSBEEEEEEEETTTT-EEEEEE
T ss_pred cCCCcccccEEEEcCCCC-eEEEcC
Confidence 65 35788888775 334433
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.0014 Score=64.97 Aligned_cols=193 Identities=13% Similarity=0.049 Sum_probs=103.3
Q ss_pred cEEEEEEe-CC--EEEEEE-cCC----eEEEeecCCC-CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec
Q 046226 134 MVVAMEVS-HD--RVYAAY-GDG----KIRVWRSTWD-NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV 204 (434)
Q Consensus 134 ~v~~l~~~-~~--~l~~~s-~dg----~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 204 (434)
.+...+|+ || .++.+. .+| .|+++|+.++ +.+... -......++|+|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~------------------------~~~~~~~~~Wsp 230 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK------------------------VSGTNGEIVWGP 230 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC------------------------EEEECSCCEECS
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc------------------------ccCceeeEEEec
Confidence 67889999 88 454433 333 4999999876 421110 001134678999
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCee--EEEcc-cCccCeEEEEEcCCC-eEEEEe---CCCeEEEEecccccCcce
Q 046226 205 SDDTLYSASLD-----KTIKVWRIRDSKC--IETIQ-AHSEPINALVVADDG-VLYSAS---DDATVRVWRRYFYSENQL 272 (434)
Q Consensus 205 ~~~~l~s~~~d-----g~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~-~l~s~~---~dg~i~iwd~~~~~~~~~ 272 (434)
|++.|+....| ..|+++++.+++. ...+. ........+.|+||+ .|+... ....|.++|+..... .
T Consensus 231 Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~--~ 308 (751)
T 2xe4_A 231 DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA--H 308 (751)
T ss_dssp STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--C
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--C
Confidence 99888877665 3688889877642 22222 223456688999999 554433 234677778762111 1
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCC----CeEEEEEcCcccccccccCc-ccCc--ccceEEEEeeCC-EEEE
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD----GYIHYWHKGWFSAQLQYGGA-LQGH--THAVMCLASVAN-YVIS 344 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~-~~~~--~~~v~~~~~~~~-~l~s 344 (434)
...............++.|+.++.+++....+ ..|..+|+... .... . +..+ ...+..+.+.++ ++++
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~---~~li~~~~~~~l~~~~~~~~~lv~~ 384 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWS---HVLVDHSEDVFMESIAVRSNYLVVA 384 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TCCC---CEEECCCSSEEEEEEEECSSEEEEE
T ss_pred ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccce---eeEECCCCCcEEEEEEEECCEEEEE
Confidence 10011122233445555554444444444433 35666666432 1111 1 1122 224566777766 4556
Q ss_pred ecCCCcE--EEEec
Q 046226 345 GSADSTS--RVWAR 356 (434)
Q Consensus 345 ~~~dg~i--~iwd~ 356 (434)
...++.. +++++
T Consensus 385 ~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 385 GRRAGLTRIWTMMA 398 (751)
T ss_dssp EEETTEEEEEEEEC
T ss_pred EEeCCEEEEEEEec
Confidence 6667754 45554
No 290
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.00 E-value=0.0037 Score=54.16 Aligned_cols=206 Identities=7% Similarity=0.030 Sum_probs=105.0
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCe-----eEEEcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEEeccccc
Q 046226 205 SDDTLYSASLD-----KTIKVWRIRDSK-----CIETIQAHSEPINALVVADDG-VLYSASDD-----ATVRVWRRYFYS 268 (434)
Q Consensus 205 ~~~~l~s~~~d-----g~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iwd~~~~~ 268 (434)
++..++.|+.+ ..+.+||..+.+ .+..+....... +++.. ++ +++.|+.+ ..+.+||+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~--- 136 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATTL-GDMIYVSGGFDGSRRHTSMERYDPN--- 136 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCEEEEEETT---
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEEEE-CCEEEEEcccCCCcccceEEEEcCC---
Confidence 56677777754 468999987755 222222222222 22223 45 66666643 357888875
Q ss_pred CcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEE
Q 046226 269 ENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVI 343 (434)
Q Consensus 269 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 343 (434)
...................+. -++++++.|+.+ ..+.+||+.+.. ......+........++..++.+++
T Consensus 137 -~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v 211 (301)
T 2vpj_A 137 -IDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALLNDHIYV 211 (301)
T ss_dssp -TTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEE
T ss_pred -CCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEECCEEEE
Confidence 223333333322222222222 256777777654 458888876432 2222222222222234445667777
Q ss_pred EecCC-----CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC-----CeEEEEecCCC
Q 046226 344 SGSAD-----STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD-----GVLKMWRVTRP 413 (434)
Q Consensus 344 s~~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D-----g~v~iw~~~~~ 413 (434)
.|+.+ ..+.+||+.+. .+..+..+....... +++.. + +.+++.|+.+ ..|.+||+.+.
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~-~~~~~-~---------~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTD-SWTTVTSMTTPRCYV-GATVL-R---------GRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSC-EEEEE-T---------TEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EeCCCCCcccceEEEEeCCCC-cEEECCCCCCcccce-eEEEE-C---------CEEEEEcCcCCCcccccEEEEcCCCC
Confidence 77764 46899999875 333333222211111 22222 3 6788888766 46788888765
Q ss_pred Ccc--ccccccccCceeEeee
Q 046226 414 KSS--CGHLNKTNGHEYFELQ 432 (434)
Q Consensus 414 ~~~--~~~~~~~~g~~~~~~~ 432 (434)
+-. ........+|....++
T Consensus 280 ~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 280 SWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEEEEEEEEEESCEEEEEE
T ss_pred eEEEcCCCCcccccceEEEeC
Confidence 432 2223334455555443
No 291
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.99 E-value=0.006 Score=52.28 Aligned_cols=208 Identities=9% Similarity=0.072 Sum_probs=126.1
Q ss_pred EEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEe
Q 046226 200 IAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
.-.+|..+.++.-. ..++.++|+++.+.++.+.- ...|.-=.|-.+..|+..+. ..|..|++.. ......+...
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT~-taVyHWs~~~---~s~P~kvFdR 145 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTD-NAVYHWSMEG---ESQPVKMFDR 145 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEES-SEEEEEESST---TCCCEEEEEC
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEEcC-CcEEEEcccC---CCCCceeeec
Confidence 34477777776655 67899999999988888764 45677777777765544443 4799999872 1122222221
Q ss_pred --cccccCeEEEEEecCCCEEEEEc-------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-----EEEEe
Q 046226 280 --TAKYSPVKTLTLTLDDGLLYGGC-------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-----YVISG 345 (434)
Q Consensus 280 --~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~s~ 345 (434)
.-....|.....+++.++++..+ -.|.+.+|..+.. ..+.+.+|...-..+..+|+ .++.+
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 220 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIEGHAASFAQFKMEGNAEESTLFCFA 220 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-----EEEEECCSEEEEEEECCTTCSSCEEEEEEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-----ccceeeeeeeeeEEEecCCCCCCceEEEEE
Confidence 11234566777788888766543 2478889986432 22355677765555555443 33333
Q ss_pred cC---CCcEEEEeccCC--Cc-e---eeEEEeec---cccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 346 SA---DSTSRVWAREQD--GR-H---TMLAVLVG---HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 346 ~~---dg~i~iwd~~~~--~~-~---~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
.. .+.++|-++... +. . +.+..+-. -.+-..++..++. ...+..-..-|.|++||++++
T Consensus 221 ~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k---------ygviyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 221 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK---------HDVVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp EEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT---------TTEEEEEETTSEEEEEETTTC
T ss_pred EecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc---------CCEEEEEeCCcEEEEEEcccC
Confidence 22 258999998543 11 0 11111111 1333445666666 678888889999999999999
Q ss_pred CccccccccccCceeE
Q 046226 414 KSSCGHLNKTNGHEYF 429 (434)
Q Consensus 414 ~~~~~~~~~~~g~~~~ 429 (434)
..+. .++.++...|
T Consensus 292 t~i~--~nrIS~d~iF 305 (365)
T 2xzh_A 292 TCIY--MNRISGETIF 305 (365)
T ss_dssp CEEE--EEECCSSCEE
T ss_pred cEEE--EeccCCCceE
Confidence 8654 3344444443
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.98 E-value=0.0089 Score=54.78 Aligned_cols=195 Identities=7% Similarity=-0.046 Sum_probs=110.5
Q ss_pred EEEEEEc----CCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCC-----eEEEeecCCCCC
Q 046226 95 ILCIAVG----NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDG-----KIRVWRSTWDNG 164 (434)
Q Consensus 95 v~~~~~~----~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg-----~i~vwd~~~~~~ 164 (434)
...++++ +..|+.+...+.|+.+|..+++...... .......++++++ .|+.+...+ .+...+.... .
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~-~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG-F 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT-T
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC-e
Confidence 4577884 3566666555899999987776554433 4456789999886 455554422 1222221111 0
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEccc--CccCeEE
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQA--HSEPINA 241 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~ 241 (434)
... ..+ ........+++++ ++.++++-..++.|+.+|..++.....+.. ....-..
T Consensus 219 ~~~-------------~~~--------~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 219 TER-------------LSL--------CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp CCE-------------EEE--------EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred ecc-------------ccc--------cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 000 000 1223456688898 565555555678899999987765222211 1223346
Q ss_pred EEEcCCC-eEE-EEeCCCeEEEEecccccCcc--eeEEEEEe-----------cccccCeEEEEE---------ecCCCE
Q 046226 242 LVVADDG-VLY-SASDDATVRVWRRYFYSENQ--LHTLILTL-----------TAKYSPVKTLTL---------TLDDGL 297 (434)
Q Consensus 242 ~~~~~~~-~l~-s~~~dg~i~iwd~~~~~~~~--~~~~~~~~-----------~~~~~~v~~~~~---------~~~~~~ 297 (434)
++++|++ .|+ +-...+.|+.++........ ........ .........+++ .+++.+
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 9999998 454 44566889998765211110 01111110 011234667888 667777
Q ss_pred EEEEcCCCeEEEEEc
Q 046226 298 LYGGCTDGYIHYWHK 312 (434)
Q Consensus 298 l~~~~~dg~i~i~d~ 312 (434)
+++-...+.|+.++.
T Consensus 358 yvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEETTTTEEEEECT
T ss_pred EEEECCCCEEEEECC
Confidence 777677788999885
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.98 E-value=0.023 Score=58.64 Aligned_cols=278 Identities=13% Similarity=0.159 Sum_probs=142.0
Q ss_pred cccEEEEEEc--------CCEEEEEeC-CCeEEEecCCCceeEeeccCC-CccEEEEEEe--CC--EEEEEEcCCeEEEe
Q 046226 92 DGQILCIAVG--------NGFIYTGSD-SNVIRIWKQPEFTECGRLKAK-TSMVVAMEVS--HD--RVYAAYGDGKIRVW 157 (434)
Q Consensus 92 ~~~v~~~~~~--------~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~--~~--~l~~~s~dg~i~vw 157 (434)
.+.|.|+++. ++++++|.. |++|+|+++++.+.+....-. .....++.+. .. +|+.|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 5679999981 479999996 999999999887665443221 1233444333 22 78889999998777
Q ss_pred ecCCCC-CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCE-EEEEecCCcEEEEEcCCCeeEEEcccC
Q 046226 158 RSTWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDT-LYSASLDKTIKVWRIRDSKCIETIQAH 235 (434)
Q Consensus 158 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~ 235 (434)
.++... .....+. .+.+ ..++.=..+...+.. +++.+ +....++--+ ++.... ...
T Consensus 633 ~~d~~tg~l~d~r~------------------~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s-~l~ 690 (1158)
T 3ei3_A 633 GLNIETGLLSDRKK------------------VTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFS-NVN 690 (1158)
T ss_dssp EECTTTCCEEEEEE------------------EECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEE-EBS
T ss_pred EEcCCCCcccccee------------------EEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEe-ccC
Confidence 654311 1111110 0112 223433333333332 33333 4444444332 222111 111
Q ss_pred ccCeEEE-EEc----CCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC------
Q 046226 236 SEPINAL-VVA----DDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD------ 304 (434)
Q Consensus 236 ~~~v~~~-~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 304 (434)
...+..+ .|+ |++++ .. .++.++|..+.... .. ....+. -...+..++++|+.+.++.++.+
T Consensus 691 ~~~v~~~~~F~se~~~~g~v-~~-~~~~LrI~~i~~~~--~~--~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~ 763 (1158)
T 3ei3_A 691 LKEVNYMCPLNSDGYPDSLA-LA-NNSTLTIGTIDEIQ--KL--HIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDT 763 (1158)
T ss_dssp SSCCCEEEEECCSSSTTEEE-EE-CSSCEEEEEECCSS--SE--EEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECS
T ss_pred hHHhceEeccCcccCCCcEE-EE-cCCceEEEEecccC--Ce--eEEEEe-CCCCceEEEEcCCCCEEEEEEEecccccc
Confidence 1233333 343 33333 23 34558888765221 11 122222 23467788888877765554321
Q ss_pred -------------------------------------------CeEEEEEcCcccccccccCcccCcccceEEEE---ee
Q 046226 305 -------------------------------------------GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLA---SV 338 (434)
Q Consensus 305 -------------------------------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~---~~ 338 (434)
+.|++.|-.+...... ..+... ..+.++. +.
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~--~~l~~n-E~~~sv~~v~~~ 840 (1158)
T 3ei3_A 764 SGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHA--HQFLQN-EYALSLVSCKLG 840 (1158)
T ss_dssp SSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEE--EECCTT-EEEEEEEEECCT
T ss_pred ccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEE--EeCCCC-cceEEEEEEEEc
Confidence 1244444322221111 112222 2334443 32
Q ss_pred ---CCEEEEec----------CCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeE
Q 046226 339 ---ANYVISGS----------ADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVL 405 (434)
Q Consensus 339 ---~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v 405 (434)
..++++|+ ..|.|++|++... +.+.+... ...++|++++-.. |.+|++. .++|
T Consensus 841 ~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~-~v~g~v~al~~~~----------g~Lla~i--g~~l 906 (1158)
T 3ei3_A 841 KDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEK-EVKGAVYSMVEFN----------GKLLASI--NSTV 906 (1158)
T ss_dssp TCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEE-EESSCEEEEEEET----------TEEEEEE--TTEE
T ss_pred cCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEE-EcCCcCEEEeeeC----------CEEEEEc--CCEE
Confidence 35888876 3588999999843 44444443 3477888887653 4444433 4799
Q ss_pred EEEecCCCCc
Q 046226 406 KMWRVTRPKS 415 (434)
Q Consensus 406 ~iw~~~~~~~ 415 (434)
++|++...+.
T Consensus 907 ~vy~l~~~~~ 916 (1158)
T 3ei3_A 907 RLYEWTTEKE 916 (1158)
T ss_dssp EEEEECTTSC
T ss_pred EEEECCCCce
Confidence 9999987653
No 294
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.013 Score=53.63 Aligned_cols=148 Identities=5% Similarity=-0.025 Sum_probs=88.9
Q ss_pred EEEEEEc---CCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEEcC-C----eEEEeecCCCCC
Q 046226 95 ILCIAVG---NGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAYGD-G----KIRVWRSTWDNG 164 (434)
Q Consensus 95 v~~~~~~---~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s~d-g----~i~vwd~~~~~~ 164 (434)
...|+++ +..|+++...+.|+.+|+.++....... .......|+++++ .|+++... + .+.+.+.. +..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 3566664 4566666655889999987765444333 4456788999986 46666542 1 23323321 111
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec-CCCEEEEEecCCcEEEEEcCCCeeEEEccc-CccCeEEE
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV-SDDTLYSASLDKTIKVWRIRDSKCIETIQA-HSEPINAL 242 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~ 242 (434)
.... .+ ........++++| ++.++++-..++.|..++...+........ .......+
T Consensus 217 ~~~~-------------~l--------~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 217 KVIT-------------EL--------TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp CSEE-------------EE--------EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred eeee-------------ee--------ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 1000 00 0123356788999 566566656678999999987654222221 22356789
Q ss_pred EEcCCC-eE-EEEeCCCeEEEEecc
Q 046226 243 VVADDG-VL-YSASDDATVRVWRRY 265 (434)
Q Consensus 243 ~~~~~~-~l-~s~~~dg~i~iwd~~ 265 (434)
+++|++ +| ++-...+.|..++..
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCC
Confidence 999999 34 444567889998865
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.89 E-value=0.011 Score=51.75 Aligned_cols=199 Identities=9% Similarity=-0.017 Sum_probs=118.4
Q ss_pred CCeEEEEEecCCCEEE-EEecCCcEEEEEcCCCeeE-EEcccCccCeEEEEEcC-CC-eEEEEeCCCeEEEEecccccCc
Q 046226 195 GPITSIAINVSDDTLY-SASLDKTIKVWRIRDSKCI-ETIQAHSEPINALVVAD-DG-VLYSASDDATVRVWRRYFYSEN 270 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~ 270 (434)
..+..++|.+.+..|+ +-...+.|..+++..+... ..+.........+++.+ ++ ++++-...+.|.++++. +.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d---G~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD---GS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT---SC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC---CC
Confidence 3467889998655555 4455678999998765321 12222234566888886 44 55565667889999876 21
Q ss_pred ceeEEEEEecccccCeEEEEEecCCCEEEEEcC--CCeEEEEEcCcccccccccCcccCcccceEEEEee--CC-EEEEe
Q 046226 271 QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT--DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--AN-YVISG 345 (434)
Q Consensus 271 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~ 345 (434)
.... + ..........++++|.+..|+.+.. .+.|..+++......... ...-.....++++ +. +.++-
T Consensus 112 ~~~~-l--~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 112 LRKV-L--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII----NSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp SCEE-E--ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCEEEEEEETTTTEEEEEE
T ss_pred cEEE-E--EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE----ECCCCCccEEEEeccCCEEEEEE
Confidence 1111 1 1233456789999997666666553 578888887532211111 1112234667776 44 44455
Q ss_pred cCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 346 SADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 346 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
+..+.|..+|+..... ..+. .+.......+++.. +.++++-...+.|..++..+++..
T Consensus 185 ~~~~~I~~~d~dG~~~-~~~~--~~~~~~P~glav~~----------~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNR-QAVV--KGSLPHPFALTLFE----------DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp TTTTEEEEEETTSCSC-EEEE--CSCCSCEEEEEEET----------TEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCCCEEEEEcCCCCce-EEEe--cCCCCCceEEEEeC----------CEEEEEecCCCeEEEEECCCCCce
Confidence 5678899999875422 2221 22334456677643 456667667788999998777643
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.85 E-value=0.00012 Score=71.59 Aligned_cols=238 Identities=13% Similarity=0.064 Sum_probs=127.7
Q ss_pred CCeEEEecCCCceeEeeccCCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCC---CceeeEeeeccCCCCceeEEE
Q 046226 111 SNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDN---GVKHVKLATIPKTGGAVRNLI 184 (434)
Q Consensus 111 dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~ 184 (434)
.+.|+..++.+.+....+.. ...+..|+|++. .|+.+. ..+.|+.+++.... ....+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~---------------- 447 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV---------------- 447 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB----------------
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE----------------
Confidence 35777888776655444433 234667888863 555554 35778888775410 00000
Q ss_pred eccccccCcCCCeEEEEEecCCCEE-EEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEe-CC-CeEE
Q 046226 185 VGKDKMMKHMGPITSIAINVSDDTL-YSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSAS-DD-ATVR 260 (434)
Q Consensus 185 ~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d-g~i~ 260 (434)
+.........|++.+.+..| ++-...+.|.++++........+.........|++.|.+ .|+.+. .. +.|.
T Consensus 448 -----i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 448 -----ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp -----CCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred -----EeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEE
Confidence 00111234567777554444 444556889999987554433333333456788998865 444433 22 6787
Q ss_pred EEecccccCcceeEEEEEecccccCeEEEEEecCCCEEE-EEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeC
Q 046226 261 VWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLY-GGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVA 339 (434)
Q Consensus 261 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 339 (434)
++++. +.... .+ ..........|++++++..|+ +-...+.|..+|+....... +. ...........+++++
T Consensus 523 ~~~~d---G~~~~-~l--~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~-~~-~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 523 KGGLN---GVDIY-SL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT-IL-EDEKRLAHPFSLAVFE 594 (699)
T ss_dssp BCCSS---SCCCC-EE--SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEE-EC-CCSSSCSSCCCCEEET
T ss_pred EEeCC---CCCee-EE--EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEE-EE-ecCCcCCCceEeEEEC
Confidence 77765 11111 11 111224567899998765554 44567789999986422221 11 1111112234555665
Q ss_pred C-EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEe
Q 046226 340 N-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAF 381 (434)
Q Consensus 340 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 381 (434)
+ ++++....+.|..++..++ ..+..+.......+.|++.
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G---~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTG---SDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTE---EEEECCCTTCSSCCCCCBC
T ss_pred CEEEEEeCCCCeEEEEEccCC---CceEEeecCCCCCcEEEEe
Confidence 5 4555556789999998766 4444443333334455444
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.84 E-value=0.011 Score=50.66 Aligned_cols=261 Identities=10% Similarity=0.051 Sum_probs=153.5
Q ss_pred CCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccc
Q 046226 110 DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
.+..|.|.|+.+...+.+..-. .-+.-.+|. .+++--....+.++|+++...++...
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~------------------- 104 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT------------------- 104 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEE-------------------
T ss_pred CCCEEEEEECCCCCCccccccc---cceeeeCCCccEEEEecCCeEEEechHHhhhhccee-------------------
Confidence 3447888898875544321111 112234665 33333347889999999887776664
Q ss_pred cccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC-CeeEEEcccCc----cCeEEEEEcCCC--eEEEEe------C
Q 046226 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-SKCIETIQAHS----EPINALVVADDG--VLYSAS------D 255 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~--~l~s~~------~ 255 (434)
....|.-=.|- +.+.|+-.+ +..|+-|+++. ..+++.+..|. ..|..-..+++. .+++|- -
T Consensus 105 ----~~e~VvfWkWi-s~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v 178 (365)
T 2xzh_A 105 ----MTDDVTFWKWI-SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 178 (365)
T ss_dssp ----CSSCEEEEEEC-SSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEE
T ss_pred ----cCCccEEEEec-CCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCcc
Confidence 34456666665 345566555 56799999974 35666666553 356666777777 333332 2
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecC--C-CEEEEEc---CCCeEEEEEcCcc-ccccccc------
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLD--D-GLLYGGC---TDGYIHYWHKGWF-SAQLQYG------ 322 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~---~dg~i~i~d~~~~-~~~~~~~------ 322 (434)
.|.+.+|... +.....+.+|......+.+..+ . .+++.+. ..++++|.++... .....+.
T Consensus 179 ~G~mQLYS~e-------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi 251 (365)
T 2xzh_A 179 VGAMQLYSVD-------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV 251 (365)
T ss_dssp EEEEEEEETT-------TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEE
T ss_pred ceeEEEEeec-------ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccccccee
Confidence 3677888765 2233344555433322222111 1 1223222 2368999998543 1111111
Q ss_pred -CcccCcccceEEEEeeCC--EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEe
Q 046226 323 -GALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 323 -~~~~~~~~~v~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
.......+-..++..+.+ .+..-+.-|.|++||++++ .++..-+-..+.|...+-... ..=++..
T Consensus 252 ~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg---t~i~~nrIS~d~iF~ta~~~~---------~~Gi~~V 319 (365)
T 2xzh_A 252 FFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISGETIFVTAPHEA---------TAGIIGV 319 (365)
T ss_dssp CCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEEEGG---------GTEEEEE
T ss_pred eCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC---cEEEEeccCCCceEEecccCC---------CCcEEEE
Confidence 111122334456777654 6777788999999999999 788777777778866655544 3446666
Q ss_pred ecCCeEEEEecCCCCccc
Q 046226 400 SLDGVLKMWRVTRPKSSC 417 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~~ 417 (434)
...|.|.--.++....+.
T Consensus 320 nr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 320 NRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp ETTCEEEEEEECTTTHHH
T ss_pred cCCCEEEEEEECcccEeh
Confidence 689999888888776543
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.80 E-value=0.0052 Score=53.40 Aligned_cols=188 Identities=7% Similarity=0.064 Sum_probs=97.3
Q ss_pred CCCEEEEEecC----CcEEEEEcCCCee--EEEcccCccCeEEEEEcCCC-eEEEEeCC------CeEEEEecccccCcc
Q 046226 205 SDDTLYSASLD----KTIKVWRIRDSKC--IETIQAHSEPINALVVADDG-VLYSASDD------ATVRVWRRYFYSENQ 271 (434)
Q Consensus 205 ~~~~l~s~~~d----g~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~-~l~s~~~d------g~i~iwd~~~~~~~~ 271 (434)
++..++.|+.+ ..+.+||..+.+- +..+....... +++.. ++ +++.|+.+ ..+.+||+. ..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~----~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAA-EGKIYTSGGSEVGNSALYLFECYDTR----TE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEE-TTEEEEECCBBTTBSCCCCEEEEETT----TT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEE-CCEEEEECCCCCCCcEeeeEEEEeCC----CC
Confidence 56677777754 5788999887643 22222222222 22223 44 66667654 458888876 12
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcC---------CCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEE
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT---------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYV 342 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 342 (434)
.......+.........+. -++++++.|+. -..+.+||+.+.. ......+......-.++..++.++
T Consensus 129 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~ 204 (306)
T 3ii7_A 129 SWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFVKDKIF 204 (306)
T ss_dssp EEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEE
T ss_pred ceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEECCEEE
Confidence 2333322222111222222 25666666653 3458889876442 222222222222223344466677
Q ss_pred EEecCC-----CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC-----CeEEEEecCC
Q 046226 343 ISGSAD-----STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD-----GVLKMWRVTR 412 (434)
Q Consensus 343 ~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D-----g~v~iw~~~~ 412 (434)
+.|+.+ ..+.+||+.+. .+..+..+.........+.+ + +.+++.||.+ ..+.+||+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~---------~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLN-EWKMVSPMPWKGVTVKCAAV--G---------SIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTT-EEEECCCCSCCBSCCEEEEE--T---------TEEEEEECBCSSSBCCEEEEEETTT
T ss_pred EEeCCCCCCCCceEEEeeCCCC-cEEECCCCCCCccceeEEEE--C---------CEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 777754 36889998875 33333333222222222222 3 6788888854 5688899887
Q ss_pred CC
Q 046226 413 PK 414 (434)
Q Consensus 413 ~~ 414 (434)
.+
T Consensus 273 ~~ 274 (306)
T 3ii7_A 273 DK 274 (306)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 299
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.79 E-value=0.0055 Score=53.15 Aligned_cols=145 Identities=12% Similarity=0.157 Sum_probs=73.9
Q ss_pred CCCEEEEEecCC-----cEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeCC-------CeEEEEecccccC
Q 046226 205 SDDTLYSASLDK-----TIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASDD-------ATVRVWRRYFYSE 269 (434)
Q Consensus 205 ~~~~l~s~~~dg-----~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~d-------g~i~iwd~~~~~~ 269 (434)
++..++.|+.++ .+.+||+.+.+-.. .+...... .+++.. ++ +++.|+.+ ..+.+||+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~---- 181 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVV-GGLLYAVGGYDVASRQCLSTVECYNAT---- 181 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTTTEECCCEEEEETT----
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCC----
Confidence 566777776553 57788887764322 22211112 223333 44 55555542 347888876
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEE
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVIS 344 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s 344 (434)
.........+....... +++. -++.+++.|+.+ ..+.+||+.... ......+........++..++.+++.
T Consensus 182 ~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~i~v~ 257 (302)
T 2xn4_A 182 TNEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAVNGLLYVV 257 (302)
T ss_dssp TTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CCcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEECCEEEEE
Confidence 12233332222221222 2222 256777777654 368899986432 22222222111122334456777778
Q ss_pred ecCCC-----cEEEEeccCC
Q 046226 345 GSADS-----TSRVWAREQD 359 (434)
Q Consensus 345 ~~~dg-----~i~iwd~~~~ 359 (434)
|+.++ .+.+||+.+.
T Consensus 258 GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTT
T ss_pred CCcCCCcccccEEEEcCCCC
Confidence 87654 4888988875
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.79 E-value=0.0085 Score=51.92 Aligned_cols=206 Identities=10% Similarity=0.057 Sum_probs=102.3
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCeeE--EEcccCccCeEEEEEcCCCeEEEEeCCC-----eEEEEecccccCcce
Q 046226 205 SDDTLYSASLD-----KTIKVWRIRDSKCI--ETIQAHSEPINALVVADDGVLYSASDDA-----TVRVWRRYFYSENQL 272 (434)
Q Consensus 205 ~~~~l~s~~~d-----g~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~ 272 (434)
++..++.|+.+ ..+.+||..+.+-. ..+...... .+++...+..++.|+.++ .+.+||+. ...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~----~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIK----SNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEEEEECSSCEEEEEEEEETT----TTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEECCEEEEEcCCCCCccCceEEEEeCC----CCe
Confidence 56677777654 35889998776522 222221122 223333233666666543 46677765 222
Q ss_pred eEEEEEecccccCeEEEEEecCCCEEEEEcCC-------CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEe
Q 046226 273 HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-------GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISG 345 (434)
Q Consensus 273 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~ 345 (434)
......+....... +++. -++++++.|+.+ ..+.+||+.... ......+........++..++.+++.|
T Consensus 136 W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~G 211 (302)
T 2xn4_A 136 WFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVLNNLLYAVG 211 (302)
T ss_dssp EEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred EeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEECCEEEEEC
Confidence 33332222221222 2222 256666666542 358889876432 222122222222223445567777787
Q ss_pred cCCC-----cEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCC-----eEEEEecCCCCc
Q 046226 346 SADS-----TSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG-----VLKMWRVTRPKS 415 (434)
Q Consensus 346 ~~dg-----~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg-----~v~iw~~~~~~~ 415 (434)
+.++ .+.+||+.+. .+..+..+......- +++. .+ +.+++.||.++ .|.+||+.+.+-
T Consensus 212 G~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~-~~~~-~~---------~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTTN-AWRQVADMNMCRRNA-GVCA-VN---------GLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CBSSSSBCCCEEEEETTTT-EEEEECCCSSCCBSC-EEEE-ET---------TEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCcccceEEEEeCCCC-CEeeCCCCCCccccC-eEEE-EC---------CEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 7653 6889998875 333333222111111 1222 23 67888888664 488999887643
Q ss_pred cc---cccccccCceeEee
Q 046226 416 SC---GHLNKTNGHEYFEL 431 (434)
Q Consensus 416 ~~---~~~~~~~g~~~~~~ 431 (434)
.. ........|....+
T Consensus 280 ~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 280 TVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp EECSSCCSSCCBSCEEEEE
T ss_pred EECCcccCcccccceEEEe
Confidence 21 12233345555544
No 301
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.77 E-value=0.0072 Score=52.58 Aligned_cols=145 Identities=8% Similarity=0.089 Sum_probs=74.2
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEEecccccCcc
Q 046226 205 SDDTLYSASLD-----KTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASDD-----ATVRVWRRYFYSENQ 271 (434)
Q Consensus 205 ~~~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iwd~~~~~~~~ 271 (434)
+++.++.|+.+ ..+.+||..+.+-.. .+......- +++.. ++ +++.|+.+ ..+.+||+. ..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~----~~ 194 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPE----RN 194 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETT----TT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEEE-CCEEEEEeCCCCCCcCceEEEEeCC----CC
Confidence 56666776643 468899987764322 222111222 22233 44 66666654 457888875 12
Q ss_pred eeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEec
Q 046226 272 LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGS 346 (434)
Q Consensus 272 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~ 346 (434)
.......+.........+.+ ++.+++.|+.+ ..+.+||+... .......+........++..++.+++.|+
T Consensus 195 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 195 EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVHQGRIYVLGG 270 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEECCEEEEEcC
Confidence 22222222221122222222 56777777654 56889998643 22222222222222233445677777777
Q ss_pred CC-----CcEEEEeccCC
Q 046226 347 AD-----STSRVWAREQD 359 (434)
Q Consensus 347 ~d-----g~i~iwd~~~~ 359 (434)
.+ ..+.+||+.+.
T Consensus 271 ~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp BCSSCBCCEEEEEETTTT
T ss_pred cCCCcccceEEEEcCCCC
Confidence 54 35788888765
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.76 E-value=0.025 Score=52.24 Aligned_cols=248 Identities=9% Similarity=0.046 Sum_probs=134.2
Q ss_pred EEEEEEeC-C--EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEE-------e
Q 046226 135 VVAMEVSH-D--RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAI-------N 203 (434)
Q Consensus 135 v~~l~~~~-~--~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~ 203 (434)
...|+|+| + .|+++.. .+.|++.|+..+........ . .........++| +
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~---~----------------~~~~~~p~~ia~~~~~~~~d 201 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI---N----------------TIPTNRIRSIAFNKKIEGYA 201 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC---T----------------TSSCSBEEEEEECCCBTTTB
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc---C----------------ccccCCCcEEEEeecccccC
Confidence 56889997 2 5666554 36677777664432221110 0 012345889999 9
Q ss_pred cCCCEEEEEecCC-------cEEEEEcCC-CeeE-----EEcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEeccc--
Q 046226 204 VSDDTLYSASLDK-------TIKVWRIRD-SKCI-----ETIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYF-- 266 (434)
Q Consensus 204 ~~~~~l~s~~~dg-------~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~-- 266 (434)
+++++|+++...+ .|.+++... +... ..+.. -.....++++|+ + ++++-..++.|..+|+..
T Consensus 202 ~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~ 280 (496)
T 3kya_A 202 DEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYF 280 (496)
T ss_dssp CTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHH
T ss_pred CCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEeccccc
Confidence 9999777776554 266665433 2221 12221 123457788984 4 566666788899999861
Q ss_pred -----ccC-----cc---eeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccc----cccCc--cc
Q 046226 267 -----YSE-----NQ---LHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQL----QYGGA--LQ 326 (434)
Q Consensus 267 -----~~~-----~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~----~~~~~--~~ 326 (434)
... .. ....+... ........++|+|+|++|+.+ +....|+.++........ .+... ..
T Consensus 281 ~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~ 359 (496)
T 3kya_A 281 KTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQS 359 (496)
T ss_dssp HHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBC
T ss_pred ccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCC
Confidence 111 00 01122222 223456789999999965554 567789987654322110 01000 00
Q ss_pred Cc---------ccceE-EEEe---------eCCEEEEecCCCcEEEEeccCCCceeeEEEeecc----------------
Q 046226 327 GH---------THAVM-CLAS---------VANYVISGSADSTSRVWAREQDGRHTMLAVLVGH---------------- 371 (434)
Q Consensus 327 ~~---------~~~v~-~~~~---------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h---------------- 371 (434)
+. -.... .+.. .++++++-..++.|+.++. ++ . +.++.+.
T Consensus 360 G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~---v~TiaG~g~~~~~~~~~~~G~~d 434 (496)
T 3kya_A 360 GYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-I---VSTYAGRGASTSLADGNQWGTDD 434 (496)
T ss_dssp CCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-B---EEEEEESCTTHHHHHSCSCCCCC
T ss_pred cccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-C---EEEEecccccccccCccccccCC
Confidence 10 01122 2333 2456666667788999983 33 1 2222221
Q ss_pred --------ccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCcc
Q 046226 372 --------RGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 372 --------~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
-.....|++.++. +.++++=.....|+.++++.....
T Consensus 435 G~~~~~a~f~~P~gIavd~~~--------g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 435 GDLREVARFRDVSGLVYDDVK--------EMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EETTTTCCCSSEEEEEEETTT--------TEEEEEETTTTEEEEEEECCCC--
T ss_pred CCchhhhhcCCCcEEEEECCC--------CEEEEEeCCCCEEEEEECCCCccc
Confidence 1134567777642 556666667788999998866544
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.68 E-value=0.014 Score=50.44 Aligned_cols=161 Identities=7% Similarity=0.089 Sum_probs=100.9
Q ss_pred cEEEEEEc--CCEEEEEe-CCCeEEEecCCCceeEe-eccC----C--CccEEEEEE---eCC-EEEEEEc---------
Q 046226 94 QILCIAVG--NGFIYTGS-DSNVIRIWKQPEFTECG-RLKA----K--TSMVVAMEV---SHD-RVYAAYG--------- 150 (434)
Q Consensus 94 ~v~~~~~~--~~~l~tg~-~dg~i~iwd~~~~~~~~-~~~~----~--~~~v~~l~~---~~~-~l~~~s~--------- 150 (434)
.--+++|+ ...|+.++ ..++|..||...+.... .+.. . ...+..|.+ .++ +|+++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34467783 35555555 78999999987553322 2322 1 114688999 465 5555433
Q ss_pred -----CCeEEEeecC---CCCCceeeEeeeccCCCCceeEEEeccccccC-cCCCeEEEEEecCCCEEEEEecC-CcEEE
Q 046226 151 -----DGKIRVWRST---WDNGVKHVKLATIPKTGGAVRNLIVGKDKMMK-HMGPITSIAINVSDDTLYSASLD-KTIKV 220 (434)
Q Consensus 151 -----dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d-g~i~v 220 (434)
+..|..+|+. +++.+....+...... .....+ -.....+++..++|+..++++.. +.|..
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~----------~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE----------FEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH----------HHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCcccccc----------ccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 5778889988 6666655543211000 000000 11347899999999999999888 88888
Q ss_pred EEcCCCeeEEEcc------cCccCeEEEEEcCCC-eEEEEeCCCeEEEEecc
Q 046226 221 WRIRDSKCIETIQ------AHSEPINALVVADDG-VLYSASDDATVRVWRRY 265 (434)
Q Consensus 221 wd~~~~~~~~~~~------~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~ 265 (434)
.+.... .+..+. ......+.|++.|++ .|++....|.|..+|+.
T Consensus 164 V~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 164 VSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 887543 333221 112346799999999 67666669999999987
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.65 E-value=0.00062 Score=66.57 Aligned_cols=200 Identities=10% Similarity=-0.038 Sum_probs=110.7
Q ss_pred CCeEEEEEecCCCEEEEEe-cCCcEEEEEcCC----CeeEEEcccCccCeEEEEEcCC-C-eEEEEeCCCeEEEEecccc
Q 046226 195 GPITSIAINVSDDTLYSAS-LDKTIKVWRIRD----SKCIETIQAHSEPINALVVADD-G-VLYSASDDATVRVWRRYFY 267 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~-~l~s~~~dg~i~iwd~~~~ 267 (434)
..+..|+|.+.+..|+.+. ..+.|+.+++.. ......+.........|++.+. + ++++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d-- 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-- 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS--
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC--
Confidence 4567889998777776654 457899999875 2222222222233456777743 4 55555567889999876
Q ss_pred cCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC--CCeEEEEEcCcccccccccCcccCcccceEEEEee---CCEE
Q 046226 268 SENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT--DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV---ANYV 342 (434)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l 342 (434)
..... ............|+++|.+.+|+.+.. .+.|..+++.......... ........|+++ +.++
T Consensus 484 -g~~~~---~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~----~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 484 -GVKRK---TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----ENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp -SCCEE---EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC----SSCSSCCCEEECTTTCCEE
T ss_pred -CCceE---EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe----CCCCCccEEEEeccCCEEE
Confidence 11111 112222345678899997666555543 2678887765322211110 111233456665 3455
Q ss_pred EEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 343 ISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 343 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
++-...+.|..+++..... ..+............|++.. +.++++....+.|..++..+++.
T Consensus 556 ~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~----------~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE----------DKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEET----------TEEEEECSTTTCEEEEETTTEEE
T ss_pred EEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEEC----------CEEEEEeCCCCeEEEEEccCCCc
Confidence 6666678899999875322 22211111112233455543 34666667778899998766554
No 305
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.65 E-value=0.0048 Score=54.98 Aligned_cols=141 Identities=11% Similarity=0.009 Sum_probs=64.0
Q ss_pred CcEEEEEcCCCe--eEEEcccCccCeEEEEEcCCCeEEEEeC------CCeEEEEecccccCcceeEEEEEecccccCeE
Q 046226 216 KTIKVWRIRDSK--CIETIQAHSEPINALVVADDGVLYSASD------DATVRVWRRYFYSENQLHTLILTLTAKYSPVK 287 (434)
Q Consensus 216 g~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 287 (434)
..+.+||..+.+ .+..+......-.+++...+.+++.|+. ...+.+||+. ........+..+........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d--~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFT--GNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC-----CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEec--CCCCcEEecCCCCCCccccc
Confidence 578899988764 2333321111113344443335666653 2346667652 11122332222211111111
Q ss_pred EEEEecCCCEEEEEcCC----------------------CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEe
Q 046226 288 TLTLTLDDGLLYGGCTD----------------------GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISG 345 (434)
Q Consensus 288 ~~~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~ 345 (434)
..+...++.+++.|+.+ ..+.+||+... .......+......-.++..++++++.|
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEETTEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCCCcccceeEEeCCEEEEEe
Confidence 11223356677777632 25778887643 2222222222222223455677788888
Q ss_pred cCCC------cEEEEeccCCC
Q 046226 346 SADS------TSRVWAREQDG 360 (434)
Q Consensus 346 ~~dg------~i~iwd~~~~~ 360 (434)
+.++ .|.++++++++
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCS
T ss_pred eeCCCCCEeeeEEEEEEcCcE
Confidence 8653 35566777663
No 306
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.61 E-value=0.022 Score=49.70 Aligned_cols=189 Identities=10% Similarity=0.043 Sum_probs=94.1
Q ss_pred cCCCEEEEEec----C-------CcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeCC--------CeEEE
Q 046226 204 VSDDTLYSASL----D-------KTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASDD--------ATVRV 261 (434)
Q Consensus 204 ~~~~~l~s~~~----d-------g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~d--------g~i~i 261 (434)
.++..++.|+. + ..+.+||..+.+-.. .+...... .+++.. ++ .++.|+.+ ..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL-FGLGEA-LNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES-CEEEEE-TTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc-eeEEEE-CCEEEEEeCCcCCCCCcccceEEE
Confidence 46777777773 1 127788887765321 12111111 122333 44 56666632 45788
Q ss_pred EecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC------CCeEEEEEcCcccccccccCcccCcccceEEE
Q 046226 262 WRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCL 335 (434)
Q Consensus 262 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 335 (434)
||+.. ........+....... +++. -++++++.|+. -..+.+||+.+. .......+......-.+.
T Consensus 122 ~d~~~----~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~ 193 (315)
T 4asc_A 122 YDRLS----FKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGAT 193 (315)
T ss_dssp EETTT----TEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEE
T ss_pred ECCCC----CcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEE
Confidence 88761 1222222222211111 2222 35666777765 246888987643 222222222222222344
Q ss_pred EeeCCEEEEecCCC-----cEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCC-------
Q 046226 336 ASVANYVISGSADS-----TSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDG------- 403 (434)
Q Consensus 336 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg------- 403 (434)
..++.+++.|+.++ .+.+||+.+. .+..+..+....... +++.. + +.+++.||.++
T Consensus 194 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~-~~~~~-~---------~~l~v~GG~~~~~~~~~~ 261 (315)
T 4asc_A 194 VHDGRIIVAAGVTDTGLTSSAEVYSITDN-KWAPFEAFPQERSSL-SLVSL-V---------GTLYAIGGFATLETESGE 261 (315)
T ss_dssp EETTEEEEEEEECSSSEEEEEEEEETTTT-EEEEECCCSSCCBSC-EEEEE-T---------TEEEEEEEEEEEECTTSC
T ss_pred EECCEEEEEeccCCCCccceEEEEECCCC-eEEECCCCCCcccce-eEEEE-C---------CEEEEECCccccCcCCcc
Confidence 55677777777654 5888998875 334433322211111 22222 3 66788887643
Q ss_pred -------eEEEEecCCCC
Q 046226 404 -------VLKMWRVTRPK 414 (434)
Q Consensus 404 -------~v~iw~~~~~~ 414 (434)
.|.+||+.+.+
T Consensus 262 ~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 262 LVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEEEEEETTTTE
T ss_pred ccccccCcEEEecCCCCh
Confidence 36778887664
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.49 E-value=0.048 Score=48.35 Aligned_cols=235 Identities=12% Similarity=0.050 Sum_probs=116.6
Q ss_pred cEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCEE
Q 046226 134 MVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDTL 209 (434)
Q Consensus 134 ~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l 209 (434)
.-..++|.|+ .++++..+|.|.+++ .++ ...+ ...+ ...........|+|+|+ +..|
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~-~~~~--~~~~--------------v~~~g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGR-LSTY--AELS--------------VYHRGESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTE-EEEE--EECC--------------CCCSTTCSEEEEEECTTTTTSCEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCC-ccEe--ecce--------------EeecCCCCceeEEECCCCCCCCEE
Confidence 4678999997 677778889999987 221 1111 1100 00123456789999998 6666
Q ss_pred EEEecC------CcEEEEEcCCCe-----e-EEEcc---cCccCeEEEEEcCCCeEEEE-eC-------------CCeEE
Q 046226 210 YSASLD------KTIKVWRIRDSK-----C-IETIQ---AHSEPINALVVADDGVLYSA-SD-------------DATVR 260 (434)
Q Consensus 210 ~s~~~d------g~i~vwd~~~~~-----~-~~~~~---~~~~~v~~~~~~~~~~l~s~-~~-------------dg~i~ 260 (434)
+++... +.|..++...+. . +..+. ........++|.|+|.|+.+ +. .|.|.
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ 172 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKIL 172 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEE
Confidence 655432 678888876431 1 12232 11123468999999944433 22 14555
Q ss_pred EEeccccc--Cc-------ceeEEEEEecccccCeEEEEEec-CCCEEEEEcCCCe--------EEEEEcCcccc-----
Q 046226 261 VWRRYFYS--EN-------QLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTDGY--------IHYWHKGWFSA----- 317 (434)
Q Consensus 261 iwd~~~~~--~~-------~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~--------i~i~d~~~~~~----- 317 (434)
-+|....- .. ..... .. .++ .....++|+| ++.++++-..... |.+..-.....
T Consensus 173 ri~~dG~~p~~npf~~~~~~~~~i-~a-~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~ 249 (352)
T 2ism_A 173 RLTPEGEPAPGNPFLGRRGARPEV-YS-LGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVV 249 (352)
T ss_dssp EECTTSSBCTTCTTTTCTTSCTTE-EE-ECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCC
T ss_pred EEcCCCCCCCCCcccCCCCCCccE-EE-EcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCccc
Confidence 55543100 00 00011 11 111 2356789999 5555444332222 33332111000
Q ss_pred ----c---ccccCcccCcccceEEEEe-eCCEEEEecCCCcEEEEeccCCCce---eeEEEeeccccceeEEEEeecccC
Q 046226 318 ----Q---LQYGGALQGHTHAVMCLAS-VANYVISGSADSTSRVWAREQDGRH---TMLAVLVGHRGPIRCAIAFLGRFG 386 (434)
Q Consensus 318 ----~---~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~ 386 (434)
. ......+..| .....+++ .|+++++.-..+.|...+++..... .....+..-...+..+++.|+
T Consensus 250 g~~~~~~~~~p~~~~~~~-~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd--- 325 (352)
T 2ism_A 250 GRGNDPRYRDPLYFWPQG-FPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD--- 325 (352)
T ss_dssp SCCCCTTSCCCSEECTTC-CCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT---
T ss_pred CCCCCCCCcCCeEecCCC-CCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC---
Confidence 0 0001111122 23445555 4556666666677888877654310 111222122356788888888
Q ss_pred CCCCCcccEEEEee
Q 046226 387 EETEDEYCTICTGS 400 (434)
Q Consensus 387 ~~~~~~~~~l~s~~ 400 (434)
|.+.++..
T Consensus 326 ------G~lyv~~~ 333 (352)
T 2ism_A 326 ------GALYVTTS 333 (352)
T ss_dssp ------SCEEEEEC
T ss_pred ------CcEEEEEe
Confidence 66555543
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.47 E-value=0.03 Score=48.56 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=94.7
Q ss_pred CCCEEEEEec----C-----CcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeCC-----CeEEEEecccc
Q 046226 205 SDDTLYSASL----D-----KTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASDD-----ATVRVWRRYFY 267 (434)
Q Consensus 205 ~~~~l~s~~~----d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~iwd~~~~ 267 (434)
++.+++.|+. + ..+.+||..+.+-.. .+....... +++.. ++ +++.|+.+ ..+.+||+..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~- 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI-DGHIYAVGGSHGCIHHNSVERYEPER- 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE-TTEEEEECCEETTEECCCEEEEETTT-
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE-CCEEEEEcCCCCCcccccEEEECCCC-
Confidence 5666666665 2 468899987764222 122111222 22223 44 56666533 3577888751
Q ss_pred cCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEE
Q 046226 268 SENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYV 342 (434)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 342 (434)
........+.........+.+ ++.+++.|+.+ ..+.+||+.... ......+......-.++..++.++
T Consensus 147 ---~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iy 219 (308)
T 1zgk_A 147 ---DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVLHNCIY 219 (308)
T ss_dssp ---TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEE
T ss_pred ---CeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEECCEEE
Confidence 222222222221122222222 56677777654 458889876432 222222222222223444566777
Q ss_pred EEecCC-----CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC-----CeEEEEecCC
Q 046226 343 ISGSAD-----STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD-----GVLKMWRVTR 412 (434)
Q Consensus 343 ~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D-----g~v~iw~~~~ 412 (434)
+.|+.+ ..+.+||+.+. .+..+..+....... +++.. + +.+++.||.+ ..|.+||+.+
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~-~~~~~-~---------~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETE-TWTFVAPMKHRRSAL-GITVH-Q---------GRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTT-EEEECCCCSSCCBSC-EEEEE-T---------TEEEEECCBCSSCBCCEEEEEETTT
T ss_pred EEeCCCCCCccceEEEEeCCCC-cEEECCCCCCCccce-EEEEE-C---------CEEEEEcCcCCCcccceEEEEcCCC
Confidence 777765 46899999875 333333222211111 22222 3 6778888754 4578888876
Q ss_pred CC
Q 046226 413 PK 414 (434)
Q Consensus 413 ~~ 414 (434)
.+
T Consensus 288 ~~ 289 (308)
T 1zgk_A 288 DT 289 (308)
T ss_dssp TE
T ss_pred CE
Confidence 54
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.47 E-value=0.087 Score=50.72 Aligned_cols=221 Identities=11% Similarity=0.005 Sum_probs=131.3
Q ss_pred EcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCe
Q 046226 149 YGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSK 227 (434)
Q Consensus 149 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~ 227 (434)
+....|+..++........+.+ ..-..+..|+|++.+..|+.+ ..++.|..+++....
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~---------------------~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~ 70 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPL---------------------TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA 70 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCC---------------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EeCCcEEEEECCCCCcceEEEc---------------------CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC
Confidence 3567788888875432221110 133467899999877666654 457889999987554
Q ss_pred eEEEcccCccCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC--
Q 046226 228 CIETIQAHSEPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT-- 303 (434)
Q Consensus 228 ~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-- 303 (434)
....+.........|++...+ ++++-...+.|.+.++. +....... .........|+++|....|+....
T Consensus 71 ~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d---G~~~~~l~---~~~l~~P~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 71 LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD---GQHRQVLV---WKDLDSPRALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT---STTCEEEE---CSSCCCEEEEEEETTTTEEEEEECSS
T ss_pred cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC---CCcEEEEE---eCCCCCcccEEEccCCCeEEEeCCCC
Confidence 333333233456788887654 55565667889999876 22211111 123346789999996666665542
Q ss_pred CCeEEEEEcCcccccccccCcccCcccceEEEEee--CC-EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEE
Q 046226 304 DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASV--AN-YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIA 380 (434)
Q Consensus 304 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 380 (434)
.+.|...++......... ..-.....++++ ++ +.++-...+.|..+|+..... +.+ ...-.....+++
T Consensus 145 ~~~I~r~~~dG~~~~~l~-----~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~---~~~l~~P~glav 215 (628)
T 4a0p_A 145 KPKIDRAAMDGSERTTLV-----PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVI---ADDLPHPFGLTQ 215 (628)
T ss_dssp SCEEEEEETTSCSCEEEE-----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE---EECCSCEEEEEE
T ss_pred CCEEEEEeCCCCceEEEE-----CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEe---eccCCCceEEEE
Confidence 567888877543322111 122345677776 44 444445677899999876433 222 222333456776
Q ss_pred eecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 381 FLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 381 ~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
.. +.++++-...+.|...|..+++.
T Consensus 216 ~~----------~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 216 YQ----------DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp ET----------TEEEEEETTTTEEEEEETTTCCS
T ss_pred EC----------CEEEEecCCCCEEEEEECCCCCc
Confidence 53 34555555678888888766654
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.46 E-value=0.089 Score=50.65 Aligned_cols=222 Identities=12% Similarity=0.070 Sum_probs=132.0
Q ss_pred EEEEEeCCCeEEEecCCCceeEeecc-CCCccEEEEEEeCC--EEEEEE-cCCeEEEeecCCCCCceeeEeeeccCCCCc
Q 046226 104 FIYTGSDSNVIRIWKQPEFTECGRLK-AKTSMVVAMEVSHD--RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIPKTGGA 179 (434)
Q Consensus 104 ~l~tg~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~--~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 179 (434)
+|+.+ ..+.|+..++.+......+. ..-..+..|+|++. .++.+. .++.|..+++........+.
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~---------- 76 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE---------- 76 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe----------
Confidence 34443 45678888887654333322 12346789999974 555554 47888888876432211110
Q ss_pred eeEEEeccccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-CeEEEEe--C
Q 046226 180 VRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSAS--D 255 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~--~ 255 (434)
........+++.+.+..|+.+ ...+.|.+.++........+...-.....|++.|. +.|+... .
T Consensus 77 ------------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 77 ------------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp ------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS
T ss_pred ------------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC
Confidence 122346788888766655544 45678999998654322222234456789999984 5555444 3
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcccCcccceEE
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMC 334 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 334 (434)
.+.|...++. +....... ........|+++++++.|+.+ ...+.|..+|+...... . +........+
T Consensus 145 ~~~I~r~~~d---G~~~~~l~----~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~--v---~~~~l~~P~g 212 (628)
T 4a0p_A 145 KPKIDRAAMD---GSERTTLV----PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE--V---IADDLPHPFG 212 (628)
T ss_dssp SCEEEEEETT---SCSCEEEE----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--E---EEECCSCEEE
T ss_pred CCEEEEEeCC---CCceEEEE----CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE--E---eeccCCCceE
Confidence 5677777765 22222221 234567899999977666665 45678999998653321 1 1112223457
Q ss_pred EEeeCCEEE-EecCCCcEEEEeccCCC
Q 046226 335 LASVANYVI-SGSADSTSRVWAREQDG 360 (434)
Q Consensus 335 ~~~~~~~l~-s~~~dg~i~iwd~~~~~ 360 (434)
+++.++.|+ +-...+.|...|..++.
T Consensus 213 lav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 213 LTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEECCEEEEecCCCCEEEEEECCCCC
Confidence 777766554 44457888888876664
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.44 E-value=0.06 Score=48.21 Aligned_cols=210 Identities=9% Similarity=0.065 Sum_probs=128.8
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEE
Q 046226 199 SIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 199 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 278 (434)
+.-.+|..+.++.-. ..++.++|+++.+.+..+.-. ..|.-=.|-.+..|+..+ +..|..|++.. ......+..
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l~lVT-~taVyHWsi~~---~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEG---ESQPVKMFD 143 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEEEEEC-SSEEEEEESSS---SCCCEEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCeEEEEc-CCeeEEecccC---CCCchhhee
Confidence 344567777666554 678999999999888877643 456666776666555443 35799999862 112222222
Q ss_pred e--cccccCeEEEEEecCCCEEEEEc-------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-----EEEE
Q 046226 279 L--TAKYSPVKTLTLTLDDGLLYGGC-------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-----YVIS 344 (434)
Q Consensus 279 ~--~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~s 344 (434)
. .-....|.....+++.++++..+ -.|.+.+|..+.. ..+.+.||...-..+..+|+ .++.
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 218 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-----CEEEECCSEEEEEEEECTTCSSEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-----ccchheeeeeeeEEEecCCCCCCceEEEE
Confidence 1 11234566777788888876543 2578889986422 22356688776666666554 4444
Q ss_pred ecC---CCcEEEEeccCC---Cce---eeEEEee---ccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 345 GSA---DSTSRVWAREQD---GRH---TMLAVLV---GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 345 ~~~---dg~i~iwd~~~~---~~~---~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
+.. .+.++|-++... ... +.+..+- .-.+-..++..++. ...+..-..-|.|+++|+++
T Consensus 219 a~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k---------ygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK---------HDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp EECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT---------TTEEEEEETTSEEEEEETTT
T ss_pred EEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc---------CCEEEEEecCceEEEEeccc
Confidence 443 278999998643 100 1111111 11333456777776 67888889999999999999
Q ss_pred CCccccccccccCceeEe
Q 046226 413 PKSSCGHLNKTNGHEYFE 430 (434)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~ 430 (434)
+..+. .++.++...|.
T Consensus 290 gt~i~--~nrIs~~~iF~ 305 (494)
T 1bpo_A 290 GTCIY--MNRISGETIFV 305 (494)
T ss_dssp CCEEE--EEECCSSCEEE
T ss_pred ceeee--eecccCCceEE
Confidence 98664 33444444443
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.38 E-value=0.07 Score=47.77 Aligned_cols=260 Identities=10% Similarity=0.042 Sum_probs=152.3
Q ss_pred CCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccc
Q 046226 110 DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
.+..|.|.|+.+...+.+..-. .-+.-.+|. .+++--...++.++|+++...++...
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~------------------- 103 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT------------------- 103 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEE-------------------
T ss_pred CCCeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEecCCeEEEEchHHhhhhccee-------------------
Confidence 3448888898875544321111 112234554 23333347899999999887776664
Q ss_pred cccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC-CeeEEEcccCc----cCeEEEEEcCCC--eEEEEe------C
Q 046226 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-SKCIETIQAHS----EPINALVVADDG--VLYSAS------D 255 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~--~l~s~~------~ 255 (434)
....|.-=.|-. .+.|+-.+ +..|+-|+++. ..+++.+..|. ..|..-..+++. .+++|- -
T Consensus 104 ----~~e~VvfWkWis-~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v 177 (494)
T 1bpo_A 104 ----MTDDVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (494)
T ss_dssp ----CSSCCCEEEEEE-TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEE
T ss_pred ----cCCCceEEEecC-CCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcc
Confidence 334455556653 44555555 56799999964 35666666553 356666777777 333332 2
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCC---CEEEEEcC---CCeEEEEEcCcc-cccccc-------
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDD---GLLYGGCT---DGYIHYWHKGWF-SAQLQY------- 321 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---dg~i~i~d~~~~-~~~~~~------- 321 (434)
.|.+.+|... ......+.+|......+.+..+. ..+..+.. .++++|.++... .....+
T Consensus 178 ~G~mQLYS~e-------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv 250 (494)
T 1bpo_A 178 VGAMQLYSVD-------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV 250 (494)
T ss_dssp EEEEEEEEST-------TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEEC
T ss_pred cceEEEeecc-------ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeee
Confidence 4677888765 22233445554444333332111 13333332 379999998643 111111
Q ss_pred cCcccCcccceEEEEeeCC--EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEe
Q 046226 322 GGALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 322 ~~~~~~~~~~v~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
........+-..++..+.+ .+..-+.-|.|++||++++ .++..-+-..+.|...+-... ..=++..
T Consensus 251 ~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg---t~i~~nrIs~~~iF~t~~~~~---------~~Gi~~V 318 (494)
T 1bpo_A 251 FFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISGETIFVTAPHEA---------TAGIIGV 318 (494)
T ss_dssp CCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEEETT---------TTEEEEE
T ss_pred eCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc---eeeeeecccCCceEEecccCC---------CCcEEEE
Confidence 1111122334456666654 6777888999999999998 777777667777766555444 3345555
Q ss_pred ecCCeEEEEecCCCCcc
Q 046226 400 SLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~ 416 (434)
...|.|.--.++....+
T Consensus 319 nr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 319 NRKGQVLSVCVEEENII 335 (494)
T ss_dssp ETTCEEEEEEECTTTHH
T ss_pred ccCceEEEEEEccccch
Confidence 68999888888876544
No 313
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.38 E-value=0.06 Score=46.97 Aligned_cols=196 Identities=11% Similarity=0.157 Sum_probs=114.9
Q ss_pred EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC----CC---EEEEEe-c-
Q 046226 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS----DD---TLYSAS-L- 214 (434)
Q Consensus 144 ~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~~-~- 214 (434)
.++.....+-+.+||+ .++.+..+. .+.++.+.+-|+ ++ ++++.. .
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~------------------------~g~~nnVD~r~~~~l~g~~~dla~as~R~~ 96 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYN------------------------TGKLNNVDIRYDFPLNGKKVDIAAASNRSE 96 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEEC------------------------CSCEEEEEEEEEEEETTEEEEEEEEEECST
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEcc------------------------CCCcccEEEecccccCCceEeEEEEeCCCC
Confidence 5555566789999999 565555441 134555555442 22 223333 3
Q ss_pred -CCcEEEEEcC--CCeeEEEccc------Cc-cCeEEEEE--cCC-C--eEEEEeCCCeEEEEecccccC-cceeEEEEE
Q 046226 215 -DKTIKVWRIR--DSKCIETIQA------HS-EPINALVV--ADD-G--VLYSASDDATVRVWRRYFYSE-NQLHTLILT 278 (434)
Q Consensus 215 -dg~i~vwd~~--~~~~~~~~~~------~~-~~v~~~~~--~~~-~--~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~ 278 (434)
+++|.+|++. +++ +..+.. .. ..+..+++ ++. + +++....+|.+..|++..... ....+.+..
T Consensus 97 ~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 97 GKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp TCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 5789999773 333 444421 11 45666777 663 4 688888999999999863222 234445555
Q ss_pred ecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccc-cccccCcc-cCc-ccceEEEEee----CC-EEEEec-CCC
Q 046226 279 LTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSA-QLQYGGAL-QGH-THAVMCLASV----AN-YVISGS-ADS 349 (434)
Q Consensus 279 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~-~~~-~~~v~~~~~~----~~-~l~s~~-~dg 349 (434)
+.. ...+..+...+....|+.+-++.-|..|+.+.... ........ .++ ...+-.|+.. ++ +|++.+ .+.
T Consensus 176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 543 35788999999899999999997776666542221 11111111 121 2245555552 33 555554 677
Q ss_pred cEEEEeccCCCceeeEEEe
Q 046226 350 TSRVWAREQDGRHTMLAVL 368 (434)
Q Consensus 350 ~i~iwd~~~~~~~~~~~~~ 368 (434)
.+.+||.+... +.+..+
T Consensus 255 s~~Vydr~~~~--~~vg~f 271 (355)
T 3amr_A 255 SYAIYDRQGKN--KYVADF 271 (355)
T ss_dssp EEEEEESSTTC--CEEEEE
T ss_pred EEEEEECCCCC--cEEEEE
Confidence 99999997321 445554
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.31 E-value=0.13 Score=49.40 Aligned_cols=219 Identities=12% Similarity=0.069 Sum_probs=120.5
Q ss_pred CCeEEEecCCCce-eEeeccCCCccEEEEEEeCC--EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEec
Q 046226 111 SNVIRIWKQPEFT-ECGRLKAKTSMVVAMEVSHD--RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVG 186 (434)
Q Consensus 111 dg~i~iwd~~~~~-~~~~~~~~~~~v~~l~~~~~--~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
...|+..++.... ....+...-.....|+|++. .|+.+.. .+.|..+++........+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~----------------- 79 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV----------------- 79 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE-----------------
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE-----------------
Confidence 4678888886543 22222233445788999873 6665544 6778888775432111110
Q ss_pred cccccCcCCCeEEEEEecCCCEEEEE-ecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCC-CeEEEEeC--CCeEEEE
Q 046226 187 KDKMMKHMGPITSIAINVSDDTLYSA-SLDKTIKVWRIRDSKCIETIQAHSEPINALVVADD-GVLYSASD--DATVRVW 262 (434)
Q Consensus 187 ~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~--dg~i~iw 262 (434)
.........+++.+.++.|+.+ ...+.|.+.++........+.........|++.|. +.|+.... .+.|...
T Consensus 80 ----~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 80 ----VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp ----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred ----eCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 0122467899999866655554 55689999998754332223234455778999886 45554442 4566666
Q ss_pred ecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEE-cCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCE
Q 046226 263 RRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGG-CTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANY 341 (434)
Q Consensus 263 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 341 (434)
++. +....... .........|++++++..|+.+ ...+.|..+|+......... .+......++++.++.
T Consensus 156 ~~d---G~~~~~l~---~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~----~~~~~~P~gi~~~~~~ 225 (619)
T 3s94_A 156 GMD---GSSRFIII---NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV----KGSLPHPFALTLFEDI 225 (619)
T ss_dssp ETT---SCSCEEEE---CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-------------CCCEEESSSE
T ss_pred ECC---CCceEEEE---eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE----eCCCCCceEEEEeCCE
Confidence 654 22222221 1233467899999976666555 45678998888643222211 1111223456666654
Q ss_pred EE-EecCCCcEEEEeccCCC
Q 046226 342 VI-SGSADSTSRVWAREQDG 360 (434)
Q Consensus 342 l~-s~~~dg~i~iwd~~~~~ 360 (434)
|+ +-...+.|...|..++.
T Consensus 226 ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 226 LYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEEECTTTCSEEEEESSSCC
T ss_pred EEEecCCCCEEEEEECCCCc
Confidence 44 44456788888887663
No 315
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.30 E-value=0.073 Score=46.33 Aligned_cols=192 Identities=9% Similarity=0.075 Sum_probs=92.7
Q ss_pred ecCCCEEEEEec----CC-------cEEEEEcCCCeeEE--EcccCccCeEEEEEcCCCeEEEEeCC-------CeEEEE
Q 046226 203 NVSDDTLYSASL----DK-------TIKVWRIRDSKCIE--TIQAHSEPINALVVADDGVLYSASDD-------ATVRVW 262 (434)
Q Consensus 203 ~~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iw 262 (434)
..++..++.|+. ++ .+.+||..+.+-.. .+...... .+++...+..++.|+.+ ..+.+|
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGEVDDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEEETTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEEECCEEEEEcCccCCCCcccceEEEE
Confidence 346777777773 12 17788887664322 12211111 22333333366666643 346777
Q ss_pred ecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC------CCeEEEEEcCcccccccccCcccCcccceEEEE
Q 046226 263 RRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT------DGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLA 336 (434)
Q Consensus 263 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 336 (434)
|+. .........+....... +++. .++.+++.|+. -..+.+||+.+.. ......+........+..
T Consensus 133 d~~----~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~ 204 (318)
T 2woz_A 133 DPV----AAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAI 204 (318)
T ss_dssp ETT----TTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE
T ss_pred eCC----CCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEE
Confidence 765 12233222222111111 1222 35666666654 2358899986432 222222222122223344
Q ss_pred eeCCEEEEecCC-----CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC---------
Q 046226 337 SVANYVISGSAD-----STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD--------- 402 (434)
Q Consensus 337 ~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D--------- 402 (434)
.++.+++.|+.+ ..+.+||+.+. .+..+..+....... +++. .+ +.+++.||.+
T Consensus 205 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~-~~~~-~~---------~~i~v~GG~~~~~~~~~~~ 272 (318)
T 2woz_A 205 HKGKIVIAGGVTEDGLSASVEAFDLKTN-KWEVMTEFPQERSSI-SLVS-LA---------GSLYAIGGFAMIQLESKEF 272 (318)
T ss_dssp ETTEEEEEEEEETTEEEEEEEEEETTTC-CEEECCCCSSCCBSC-EEEE-ET---------TEEEEECCBCCBC----CC
T ss_pred ECCEEEEEcCcCCCCccceEEEEECCCC-eEEECCCCCCcccce-EEEE-EC---------CEEEEECCeeccCCCCcee
Confidence 567777777653 35778898875 334433332222111 2222 23 5677877764
Q ss_pred -----CeEEEEecCCCCc
Q 046226 403 -----GVLKMWRVTRPKS 415 (434)
Q Consensus 403 -----g~v~iw~~~~~~~ 415 (434)
..|.+||+.+.+-
T Consensus 273 ~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 273 APTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp BCCBCCCEEEEETTTTEE
T ss_pred ccceeeeEEEEeCCCCEe
Confidence 3577888876543
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.27 E-value=0.036 Score=49.53 Aligned_cols=152 Identities=10% Similarity=0.104 Sum_probs=94.0
Q ss_pred EecCCCEEEEEecCCcEEEEEcCCCeeEEEcccC----ccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcc------
Q 046226 202 INVSDDTLYSASLDKTIKVWRIRDSKCIETIQAH----SEPINALVVADDGVLYSASDDATVRVWRRYFYSENQ------ 271 (434)
Q Consensus 202 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------ 271 (434)
...++..++.+- ++.||.-++......+.+... -..|..+..+|+|.+++...+..|.|..+.......
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc
Confidence 345677777766 578998888754444444432 236788999999955455566789998886221111
Q ss_pred --eeEEEEEecc----cccCeEEEEEec---CCCEEEEEcCCCeEEEEEcCcccc-cccccC-----cccCcccceEEEE
Q 046226 272 --LHTLILTLTA----KYSPVKTLTLTL---DDGLLYGGCTDGYIHYWHKGWFSA-QLQYGG-----ALQGHTHAVMCLA 336 (434)
Q Consensus 272 --~~~~~~~~~~----~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~-----~~~~~~~~v~~~~ 336 (434)
.......+.. ...+|..+.|+| .+..|++-..|+.|++||+..... +..+.. ........|.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 1111112211 246799999999 467899999999999999975221 111111 1112235677888
Q ss_pred eeCC----EEEEecCCCcEEEE
Q 046226 337 SVAN----YVISGSADSTSRVW 354 (434)
Q Consensus 337 ~~~~----~l~s~~~dg~i~iw 354 (434)
|.+. |+++.+.+|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 8644 55556688887654
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.24 E-value=0.19 Score=49.74 Aligned_cols=279 Identities=11% Similarity=0.122 Sum_probs=145.6
Q ss_pred cEEEEEEcCCEEEEEeCCCeEEEecCCCceeEee-c---cCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceee
Q 046226 94 QILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGR-L---KAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHV 168 (434)
Q Consensus 94 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~---~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~ 168 (434)
.|.++..++..|..|+.+ -|..+|..+.+.... . ......|.++....+ .+.+++.+| +..++...... ..+
T Consensus 104 ~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~-~~~ 180 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKF-EGI 180 (758)
T ss_dssp CEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEE-EEE
T ss_pred eEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCce-EEe
Confidence 477766555567777766 577888766543321 0 112346888877754 677777654 66777544321 111
Q ss_pred EeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC
Q 046226 169 KLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG 248 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (434)
. .+.. .......|.++....++..|..|+. +-|..+|..+++...........|.++....++
T Consensus 181 ~---~~~~-------------~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 243 (758)
T 3ott_A 181 P---LPVH-------------SSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG 243 (758)
T ss_dssp C---CCCC-------------TTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC
T ss_pred c---CCCc-------------cccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC
Confidence 0 0000 0001234788887777776666764 458889987765432211223468888888888
Q ss_pred eEEEEeCCCeEEEEecccccCcceeEEEEEe----cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccC-
Q 046226 249 VLYSASDDATVRVWRRYFYSENQLHTLILTL----TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGG- 323 (434)
Q Consensus 249 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 323 (434)
.|..|+.+ -+.++|... .......... ......|.++..+.+|. |..|+..| +.++.... ......
T Consensus 244 ~lWigT~~-Gl~~~~~~~---~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~---~~~~~~~ 314 (758)
T 3ott_A 244 DLLAGTDN-GLYVYHNDT---TPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNS---ALQFIPI 314 (758)
T ss_dssp CEEEEETT-EEEEECCTT---SCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC----CEEEEH
T ss_pred CEEEEeCC-ceeEEecCC---CcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCC---ceeEEec
Confidence 66667754 477787541 1111110000 01224588888877665 55566666 54443211 111100
Q ss_pred ---cccCcccceEEEEeeC-CEEEEecCCCcEEEEeccCCCceeeEEEee-------ccccceeEEEEeecccCCCCCCc
Q 046226 324 ---ALQGHTHAVMCLASVA-NYVISGSADSTSRVWAREQDGRHTMLAVLV-------GHRGPIRCAIAFLGRFGEETEDE 392 (434)
Q Consensus 324 ---~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~~~~ 392 (434)
........|.++..+. ..|..|+.+| +..++..++.. ..+..+. -....|.++.-..+
T Consensus 315 ~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~--------- 383 (758)
T 3ott_A 315 SQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGER-HDAIWYRMGDKTYPLSHNRIRHIYEDKE--------- 383 (758)
T ss_dssp HHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSC-CCCEEECTTCSSSCCSCSCEEEEEECTT---------
T ss_pred ccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeeccccccc-ceeEEeccCCcCCCCCCCceEEEEECCC---------
Confidence 0001224577777663 3555566555 55666544211 1111111 01234666665544
Q ss_pred ccEEEEeecCCeEEEEecCCCC
Q 046226 393 YCTICTGSLDGVLKMWRVTRPK 414 (434)
Q Consensus 393 ~~~l~s~~~Dg~v~iw~~~~~~ 414 (434)
+. |..|. ++-|..++..+++
T Consensus 384 g~-lWigt-~~GL~~~~~~~~~ 403 (758)
T 3ott_A 384 QQ-LWIAT-DGSINRYDYATRQ 403 (758)
T ss_dssp SC-EEEEE-TTEEEEEETTTTE
T ss_pred CC-EEEEe-CCcHhhcCcCCCc
Confidence 44 44455 4568888876543
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.22 E-value=0.015 Score=51.99 Aligned_cols=113 Identities=18% Similarity=0.177 Sum_probs=78.9
Q ss_pred CeEEEEEecCCCEEEEEecCCcEEEEEcCCCe------------eEEEccc------CccCeEEEEEcCCC----eEEEE
Q 046226 196 PITSIAINVSDDTLYSASLDKTIKVWRIRDSK------------CIETIQA------HSEPINALVVADDG----VLYSA 253 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~------------~~~~~~~------~~~~v~~~~~~~~~----~l~s~ 253 (434)
.|..+..+|+|++|+..+ +..|.|..+..+. ..+.+.. ...+|..+.|+|-+ .|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999887 5679998886321 1122221 24679999999965 79999
Q ss_pred eCCCeEEEEecccccCcceeEE-----EEEecccccCeEEEEEecCCCEEEEEc--CCCeEEEE
Q 046226 254 SDDATVRVWRRYFYSENQLHTL-----ILTLTAKYSPVKTLTLTLDDGLLYGGC--TDGYIHYW 310 (434)
Q Consensus 254 ~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~ 310 (434)
..|+.|++||+........ .. ..........|.+++|..++-.|+..+ .+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999984221111 01 011222336789999999888788755 88888765
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.19 E-value=0.11 Score=46.04 Aligned_cols=144 Identities=7% Similarity=-0.091 Sum_probs=69.6
Q ss_pred CeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcC------CCeEEEEEcCcccccccccCcccCcc-
Q 046226 257 ATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCT------DGYIHYWHKGWFSAQLQYGGALQGHT- 329 (434)
Q Consensus 257 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~- 329 (434)
..+.+||+. .........+......-.+++.. ++++++.|+. ...+.+||++...........+....
T Consensus 168 ~~v~~yd~~----~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~ 242 (357)
T 2uvk_A 168 KFLLSFDPS----TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG 242 (357)
T ss_dssp CEEEEEETT----TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC
T ss_pred ccEEEEeCC----CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc
Confidence 468888876 22333333332211111223332 5566666653 34577787633333333322221111
Q ss_pred -cceEEEEeeCCEEEEecCC----------------------CcEEEEeccCCCceeeEEEeeccccceeEEEEeecccC
Q 046226 330 -HAVMCLASVANYVISGSAD----------------------STSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFG 386 (434)
Q Consensus 330 -~~v~~~~~~~~~l~s~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 386 (434)
..-.+...++.+++.|+.+ ..+.+||+.+. .+..+..+......-.+ +..+
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~--~~~~--- 316 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KWDKSGELSQGRAYGVS--LPWN--- 316 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEE--EEET---
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-ceeeCCCCCCCccccee--EEeC---
Confidence 1123445567777777732 25788998865 44555544433222222 2233
Q ss_pred CCCCCcccEEEEeecCC------eEEEEecCCCCccc
Q 046226 387 EETEDEYCTICTGSLDG------VLKMWRVTRPKSSC 417 (434)
Q Consensus 387 ~~~~~~~~~l~s~~~Dg------~v~iw~~~~~~~~~ 417 (434)
+++++.||.++ .|.++++++.+...
T Consensus 317 ------~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 317 ------NSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp ------TEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred ------CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 67888888653 35566888776543
No 320
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.17 E-value=0.29 Score=50.64 Aligned_cols=177 Identities=7% Similarity=0.001 Sum_probs=105.4
Q ss_pred CcEEEEEcCCCeeEEEccc-CccCeEEEEE---cCC--CeEEEEe----------CCCeEEEEecccccCcceeEEEEEe
Q 046226 216 KTIKVWRIRDSKCIETIQA-HSEPINALVV---ADD--GVLYSAS----------DDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 216 g~i~vwd~~~~~~~~~~~~-~~~~v~~~~~---~~~--~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
+.|++.|..+.+.+..+.- ....+.+++. ..+ .+++.|+ ..|.|.+|++. +. ..+.+..
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~---~~-kL~lv~~- 881 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS---DG-KLQTVAE- 881 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE---TT-EEEEEEE-
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE---CC-EEEEEEE-
Confidence 3577888777776655543 2334555543 333 2777775 35889999986 11 2222222
Q ss_pred cccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCC
Q 046226 280 TAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 280 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~ 359 (434)
....+++++++-- +| +|++|- ..+|++|++...+.. ......-.+ -.+..+...+++++.|..-..|.++..+..
T Consensus 882 ~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L-~~~~~~~~~-i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 882 KEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKEL-RTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp EEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCE-EEEEEECCC-SCEEEEEEETTEEEEEESSBCEEEEEEETT
T ss_pred EEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceE-EEEeecccc-EEEEEEeccCCEEEEEEhhheEEEEEEEcC
Confidence 2345778887754 34 454443 478999998643211 111110111 113456667999999998888877665432
Q ss_pred C-ceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCC
Q 046226 360 G-RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 360 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~ 413 (434)
. +...+ .-..+...++++.+-.+ ..++.+..+|.|.+...+..
T Consensus 957 ~~~L~~~-a~D~~~~~vta~~~ld~----------~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 957 EGNFEEI-ARDFNPNWMSAVEILDD----------DNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp TTEEEEE-EECCSCBCEEEEEEEET----------TEEEEEETTSEEEEEEECTT
T ss_pred CCeEEEE-EeecccccEEEEEEEcc----------CcEEEEcCCCcEEEEecCCC
Confidence 2 11222 22334567888888754 36888999999999988764
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.14 E-value=0.089 Score=45.72 Aligned_cols=146 Identities=7% Similarity=-0.010 Sum_probs=72.7
Q ss_pred CCCEEEEEecC--------CcEEEEEcCCCeeE--EEcccCccCeEEEEEcCCCeEEEEeC-C-----CeEEEEeccccc
Q 046226 205 SDDTLYSASLD--------KTIKVWRIRDSKCI--ETIQAHSEPINALVVADDGVLYSASD-D-----ATVRVWRRYFYS 268 (434)
Q Consensus 205 ~~~~l~s~~~d--------g~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~s~~~-d-----g~i~iwd~~~~~ 268 (434)
++..++.|+.+ ..+.+||..+.+-. ..+...... .+++...+.+++.|+. + ..+.+||+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--- 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPK--- 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCTTSCBCCCEEEEETT---
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEEECCEEEEEeCCCCCCcccceEEEEeCC---
Confidence 56666666632 46889999876422 222211111 2233333336666665 2 468888876
Q ss_pred CcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC-----eEEEEEcCcccccccccCcccCcccceEEEEeeCCEEE
Q 046226 269 ENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG-----YIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVI 343 (434)
Q Consensus 269 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 343 (434)
.........+.........+. -++++++.|+.++ .+.+||+.+. .......+........++..++.+++
T Consensus 174 -~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~l~v 248 (315)
T 4asc_A 174 -KFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSSLSLVSLVGTLYA 248 (315)
T ss_dssp -TTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred -CCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccceeEEEECCEEEE
Confidence 122322222221111122222 2567777776544 5788887643 22222222222222234455677777
Q ss_pred EecCCC--------------cEEEEeccCC
Q 046226 344 SGSADS--------------TSRVWAREQD 359 (434)
Q Consensus 344 s~~~dg--------------~i~iwd~~~~ 359 (434)
.|+.++ .+.+||+.+.
T Consensus 249 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 249 IGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ECCccccCcCCccccccccCcEEEecCCCC
Confidence 777542 3677887765
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.01 E-value=0.11 Score=53.70 Aligned_cols=260 Identities=9% Similarity=0.041 Sum_probs=140.8
Q ss_pred CCCeEEEecCCCceeEeeccCCCccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccc
Q 046226 110 DSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKD 188 (434)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
.+..|.|.|+.++..+.+-. -..-+.-.+|. .+++--...++.|+|+++...++...
T Consensus 46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~------------------- 103 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT------------------- 103 (1630)
T ss_pred CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccc-------------------
Confidence 34488888988765442211 11122334554 34443457899999998877766653
Q ss_pred cccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC-CeeEEEcccC----ccCeEEEEEcCCC--eEEEEe------C
Q 046226 189 KMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD-SKCIETIQAH----SEPINALVVADDG--VLYSAS------D 255 (434)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~--~l~s~~------~ 255 (434)
...+|.-=.|-. .+.|+-.+ +..|+-|++.. ..+++.+..| ...|..-..+++. .+++|- -
T Consensus 104 ----~~e~VvfWkWis-~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v 177 (1630)
T 1xi4_A 104 ----MTDDVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (1630)
T ss_pred ----cCCCceEEEecC-CCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence 334555555643 44555555 56799999964 3455555544 3456666777777 333332 3
Q ss_pred CCeEEEEecccccCcceeEEEEEecccccCeEEEEEec--C-CCEEEEEc---CCCeEEEEEcCcc-ccccccc------
Q 046226 256 DATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL--D-DGLLYGGC---TDGYIHYWHKGWF-SAQLQYG------ 322 (434)
Q Consensus 256 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~---~dg~i~i~d~~~~-~~~~~~~------ 322 (434)
.|.+.+|... ......+.+|.+....+.... . ...+..+. ..++++|-++... .....+.
T Consensus 178 ~G~mQLyS~e-------r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~ 250 (1630)
T 1xi4_A 178 VGAMQLYSVD-------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV 250 (1630)
T ss_pred cceeeeeecc-------cccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccc
Confidence 5788888765 222333444443333332211 1 11222221 1378999998643 1111111
Q ss_pred -CcccCcccceEEEEeeCC--EEEEecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEe
Q 046226 323 -GALQGHTHAVMCLASVAN--YVISGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTG 399 (434)
Q Consensus 323 -~~~~~~~~~v~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~ 399 (434)
........-..++..+.+ .+...+.-|.|++||+.++ .++..-+-...+|...+..... +. ++..
T Consensus 251 ~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~---~~i~~~ris~~~iF~~~~~~~~--------~g-~~~v 318 (1630)
T 1xi4_A 251 FFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISGETIFVTAPHEAT--------AG-IIGV 318 (1630)
T ss_pred cCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc---hhhhhccccCCceEEeccCCCC--------Cc-eEEE
Confidence 000111222344555543 6777788999999999998 5555544445555444433321 33 4444
Q ss_pred ecCCeEEEEecCCCCcc
Q 046226 400 SLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 400 ~~Dg~v~iw~~~~~~~~ 416 (434)
...|.|.--.++....+
T Consensus 319 nr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 319 NRKGQVLSVCVEEENII 335 (1630)
T ss_pred cCCceEEEEEEccchhh
Confidence 47777777776665543
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.96 E-value=0.18 Score=44.64 Aligned_cols=237 Identities=10% Similarity=0.001 Sum_probs=119.4
Q ss_pred ccEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCE
Q 046226 133 SMVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDT 208 (434)
Q Consensus 133 ~~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~ 208 (434)
.....|+|.|+ .++++..+|.|++++. .+. ..+ ...+ ...........|+++|+ +..
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~--~~~~--------------v~~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK--KLV--ASFD--------------VANVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCE--EEE--EECC--------------CCCSTTCSEEEEEECTTTTTSCE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEe--eccc--------------eeecCCCceeeEEeCCCCCcCCE
Confidence 44688999987 7888888899998873 222 111 1110 00112345789999997 566
Q ss_pred EEEEec----C----CcEEEEEcCCC-------eeE-EEccc-CccCeEEEEEcCCC-eEEEEeC-------------CC
Q 046226 209 LYSASL----D----KTIKVWRIRDS-------KCI-ETIQA-HSEPINALVVADDG-VLYSASD-------------DA 257 (434)
Q Consensus 209 l~s~~~----d----g~i~vwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~-~l~s~~~-------------dg 257 (434)
|+++.. + +.|..|+.... +.+ ..+.. .......|+|.|+| ++++.+. .|
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G 169 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAG 169 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSS
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCe
Confidence 665543 2 56888887643 111 11221 11234679999999 4444322 24
Q ss_pred eEEEEeccccc--Ccce-eEEEEEecccccCeEEEEEec-CCCEEEEEcCCC---eEEEEEcCcccc---------c---
Q 046226 258 TVRVWRRYFYS--ENQL-HTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTDG---YIHYWHKGWFSA---------Q--- 318 (434)
Q Consensus 258 ~i~iwd~~~~~--~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~~---------~--- 318 (434)
.|.-++....- .... ...+.. .++ .....++|+| +++++++-.... .|.+........ .
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~i~a-~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~ 247 (354)
T 3a9g_A 170 KILRVDEEGRPPADNPFPNSPIWS-YGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEF 247 (354)
T ss_dssp EEEEECTTSCCCTTSSSTTCCEEE-ECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTS
T ss_pred EEEEEcCCCCCCCCCCCCCCcEEE-Ecc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCC
Confidence 55555543100 0000 001111 122 3456899999 555444432221 243332110000 0
Q ss_pred ccccCcc-cCcccceEEEEe---------eCCEEEEecCCCcEEEEeccCCCceeeEEEe-eccccceeEEEEeecccCC
Q 046226 319 LQYGGAL-QGHTHAVMCLAS---------VANYVISGSADSTSRVWAREQDGRHTMLAVL-VGHRGPIRCAIAFLGRFGE 387 (434)
Q Consensus 319 ~~~~~~~-~~~~~~v~~~~~---------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~ 387 (434)
......+ ..| .....+.+ .|+++++.-..+.|...++...+.......+ .+-...+..+++.|+
T Consensus 248 ~~p~~~~~~~~-~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD---- 322 (354)
T 3a9g_A 248 VDPVIDTGSET-WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD---- 322 (354)
T ss_dssp CCCSEECTTCC-CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT----
T ss_pred cCCEeecCCCC-cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC----
Confidence 0000111 112 24556665 3556666666778888888753222112222 222456888999888
Q ss_pred CCCCcccEEEEee
Q 046226 388 ETEDEYCTICTGS 400 (434)
Q Consensus 388 ~~~~~~~~l~s~~ 400 (434)
|.+.++..
T Consensus 323 -----G~lyv~~~ 330 (354)
T 3a9g_A 323 -----GGILISTS 330 (354)
T ss_dssp -----SCEEEEEC
T ss_pred -----CcEEEEEe
Confidence 76666553
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.92 E-value=0.18 Score=43.86 Aligned_cols=145 Identities=7% Similarity=0.079 Sum_probs=72.4
Q ss_pred CCCEEEEEecC-------CcEEEEEcCCCeeEE--EcccCccCeEEEEEcCCC-eEEEEeC------CCeEEEEeccccc
Q 046226 205 SDDTLYSASLD-------KTIKVWRIRDSKCIE--TIQAHSEPINALVVADDG-VLYSASD------DATVRVWRRYFYS 268 (434)
Q Consensus 205 ~~~~l~s~~~d-------g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~-~l~s~~~------dg~i~iwd~~~~~ 268 (434)
++..++.|+.+ ..+.+||..+.+-.. .+......- +++.. ++ +++.|+. -..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~--- 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVISH-NGMIYCLGGKTDDKKCTNRVFIYNPK--- 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEEE-TTEEEEECCEESSSCBCCCEEEEETT---
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEEE-CCEEEEEcCCCCCCCccceEEEEcCC---
Confidence 56667777654 357888987764322 222111111 22233 45 5566653 2358888876
Q ss_pred CcceeEEEEEecccccCeEEEEEecCCCEEEEEcCC-----CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEE
Q 046226 269 ENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD-----GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVI 343 (434)
Q Consensus 269 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 343 (434)
................. +++. -++++++.|+.+ ..+.+||+.+. .......+........++..++.+++
T Consensus 184 -~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v 258 (318)
T 2woz_A 184 -KGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTN--KWEVMTEFPQERSSISLVSLAGSLYA 258 (318)
T ss_dssp -TTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTC--CEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred -CCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCC--eEEECCCCCCcccceEEEEECCEEEE
Confidence 12233332222211112 2222 256677776543 35778887643 22222222222222234455677777
Q ss_pred EecCC--------------CcEEEEeccCC
Q 046226 344 SGSAD--------------STSRVWAREQD 359 (434)
Q Consensus 344 s~~~d--------------g~i~iwd~~~~ 359 (434)
.|+.+ ..+.+||+.+.
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 77754 35778888765
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.90 E-value=0.028 Score=45.29 Aligned_cols=153 Identities=11% Similarity=0.003 Sum_probs=80.5
Q ss_pred cEEEEEEeCC-EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE
Q 046226 134 MVVAMEVSHD-RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA 212 (434)
Q Consensus 134 ~v~~l~~~~~-~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 212 (434)
.+.+++|+|+ .|+++ .+|.+.-.+..+.....-+... ..+ +. .+-. ...++.|.++|.+.++
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~---------t~I--G~---~Gw~-~F~a~~fD~~G~LYav- 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRA---------KKI--GN---GGWN-QFQFLFFDPNGYLYAV- 104 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHC---------EEE--EC---SCGG-GCSEEEECTTSCEEEE-
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccc---------cEe--cc---cccc-cceEEEECCCCCEEEe-
Confidence 5679999998 66666 7787655554321111100000 000 00 0111 1578899999988877
Q ss_pred ecCCcEEEEEcCCCeeE-------EEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcc-eeEEEEEeccccc
Q 046226 213 SLDKTIKVWRIRDSKCI-------ETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQ-LHTLILTLTAKYS 284 (434)
Q Consensus 213 ~~dg~i~vwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~ 284 (434)
.||.|+-++-.+...- ..-..-=..+..|.+.|+|.|.+.. |+.+.-+......... .............
T Consensus 105 -~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~ 182 (236)
T 1tl2_A 105 -SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWD 182 (236)
T ss_dssp -ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGG
T ss_pred -CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcc
Confidence 5699988876332110 0001111467899999999777777 8885433221000000 0011111112233
Q ss_pred CeEEEEEecCCCEEEEEcCCCeE
Q 046226 285 PVKTLTLTLDDGLLYGGCTDGYI 307 (434)
Q Consensus 285 ~v~~~~~~~~~~~l~~~~~dg~i 307 (434)
..+.+.|.+++.+.++. +|.+
T Consensus 183 ~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 183 TFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp GEEEEEECTTSCEEEEE--TTEE
T ss_pred eEEEEEECCCCcEEEEe--CCeE
Confidence 44557788888877766 6744
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.029 Score=49.03 Aligned_cols=115 Identities=10% Similarity=0.190 Sum_probs=72.8
Q ss_pred CCEEEEEeCCCeEEEecCCCceeEeeccCCC-ccEEEEEEe----CCEEEEE--EcCCeEEEeecCCCCCceeeEeeecc
Q 046226 102 NGFIYTGSDSNVIRIWKQPEFTECGRLKAKT-SMVVAMEVS----HDRVYAA--YGDGKIRVWRSTWDNGVKHVKLATIP 174 (434)
Q Consensus 102 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~----~~~l~~~--s~dg~i~vwd~~~~~~~~~~~~~~~~ 174 (434)
++++++++.||.|.-.|.++|+...+++... .++....-. .+.++.+ +.||.|..++..++.....+.+...-
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 5678999999999999999999998886541 222221100 1244544 57999999998765332222211100
Q ss_pred CCCCceeEEEeccccccCcCCCeEE---EEE-----ecCCCEEEEEecCCcEEEEEcCCCeeEEEccc
Q 046226 175 KTGGAVRNLIVGKDKMMKHMGPITS---IAI-----NVSDDTLYSASLDKTIKVWRIRDSKCIETIQA 234 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-----~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 234 (434)
...++.. ..+ ...+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 90 ------------------~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 ------------------STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp ------------------TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ------------------eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1112221 000 01466889999999999999999999998864
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.72 E-value=0.54 Score=46.49 Aligned_cols=231 Identities=11% Similarity=0.092 Sum_probs=126.5
Q ss_pred ccEEEEEE-cCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEee
Q 046226 93 GQILCIAV-GNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 93 ~~v~~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~ 171 (434)
..|.++.. ....|..|+.+| +..||..+.+...........|.++....+.|..++.+ -+..+|..+... ..+.
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~-~~~~-- 137 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKL-TSFD-- 137 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCE-EEEC--
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeE-EEec--
Confidence 46888877 566788888765 67889877543321111234577776666688888876 577888654321 1110
Q ss_pred eccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEE-ccc----CccCeEEEEEcC
Q 046226 172 TIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIET-IQA----HSEPINALVVAD 246 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~ 246 (434)
.... .-....|.++....++.+.+ |+.+ -|..+|..+++.... ... ....|.++....
T Consensus 138 ~~~~---------------~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 200 (758)
T 3ott_A 138 TRRN---------------GLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT 200 (758)
T ss_dssp HHHH---------------CCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET
T ss_pred cCCC---------------CcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC
Confidence 0000 01234578887776666544 5544 488888876653221 111 123488888876
Q ss_pred CC-eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccC--
Q 046226 247 DG-VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGG-- 323 (434)
Q Consensus 247 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 323 (434)
++ .|..|+. +-+..+|... . .......+ ....|.++....+|.+.+ |+.+ -+.+++............
T Consensus 201 ~~~~lWigt~-~Gl~~~~~~~---~-~~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~ 271 (758)
T 3ott_A 201 TRQCVWIGTE-GYLFQYFPST---G-QIKQTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSR 271 (758)
T ss_dssp TTTEEEEEEE-EEEEEEETTT---T-EEEEEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTT
T ss_pred CCCEEEEEEC-CCCeEEcCCC---C-eEEeccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCC
Confidence 65 5566664 4577787651 1 11111111 234578888877766544 5544 577887653221111000
Q ss_pred -cccCcccceEEEEeeC-CEEEEecCCCcEEEEe
Q 046226 324 -ALQGHTHAVMCLASVA-NYVISGSADSTSRVWA 355 (434)
Q Consensus 324 -~~~~~~~~v~~~~~~~-~~l~s~~~dg~i~iwd 355 (434)
...-....|.++..+. ..|..|+..| +.++.
T Consensus 272 ~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~ 304 (758)
T 3ott_A 272 NIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSR 304 (758)
T ss_dssp CTTSCSCSCEEEEEECTTCCEEEEESSS-EEEEC
T ss_pred CcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccc
Confidence 0011234688887763 3566666666 54443
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.59 E-value=0.35 Score=42.76 Aligned_cols=247 Identities=12% Similarity=0.061 Sum_probs=119.8
Q ss_pred cEEEEEEeCC-E-EEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCE
Q 046226 134 MVVAMEVSHD-R-VYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDT 208 (434)
Q Consensus 134 ~v~~l~~~~~-~-l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~ 208 (434)
....|+|.|+ . ++++...|.|++++.... ....+ ...+. ...........|+++|+ +..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~-~~~~~--~~~~~-------------v~~~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKG-LSAPL--SGVPD-------------VWAHGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTE-ECCCC--BSCCC-------------CCCSTTCSEEEEEECTTHHHHCE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCc-eeeEe--cCCcc-------------cccCCCCCceeEEECCCCCCCCE
Confidence 4678999997 6 888888999998874311 10000 00000 00123345689999996 555
Q ss_pred EEEEec--------CCcEEEEEcCCC-------eeE-EEccc---CccCeEEEEEcCCCeEEEEeCC-------------
Q 046226 209 LYSASL--------DKTIKVWRIRDS-------KCI-ETIQA---HSEPINALVVADDGVLYSASDD------------- 256 (434)
Q Consensus 209 l~s~~~--------dg~i~vwd~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~l~s~~~d------------- 256 (434)
|+.... ...|..+++... +.+ ..+.. ....-..|+|.|++.|+.+..|
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~ 162 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKL 162 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSC
T ss_pred EEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCC
Confidence 555432 235666766432 111 11211 1122457999999944433322
Q ss_pred -CeEEEEeccccc--Ccc------eeEEEEEecccccCeEEEEEecCCCEEEEEcCC--CeEEEEEcCccccc-------
Q 046226 257 -ATVRVWRRYFYS--ENQ------LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTD--GYIHYWHKGWFSAQ------- 318 (434)
Q Consensus 257 -g~i~iwd~~~~~--~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~------- 318 (434)
|.|.-+|..... ... ....+.. .++ .....++|+|....|+++... +.=.|.-+.....-
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~ 240 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATW 240 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCS
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccC
Confidence 456555544100 000 0001111 112 346789999944444444332 11122211111000
Q ss_pred -----------------cccc---CcccCcccceEEEEee---------CCEEEEecCCCcEEEEeccCCCceeeEEEee
Q 046226 319 -----------------LQYG---GALQGHTHAVMCLASV---------ANYVISGSADSTSRVWAREQDGRHTMLAVLV 369 (434)
Q Consensus 319 -----------------~~~~---~~~~~~~~~v~~~~~~---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 369 (434)
..+. ..+ .+......+.+. ++++++.-..+.|...++..+........+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 319 (353)
T 2g8s_A 241 GINYSGFKIPEAKGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT 319 (353)
T ss_dssp SBCTTSSCCTTCCBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG
T ss_pred CCCCCCCccCcccCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc
Confidence 0000 001 112245566653 5677777777888888887542111111122
Q ss_pred ccccceeEEEEeecccCCCCCCcccEEEEee-cCCeEEEEec
Q 046226 370 GHRGPIRCAIAFLGRFGEETEDEYCTICTGS-LDGVLKMWRV 410 (434)
Q Consensus 370 ~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~-~Dg~v~iw~~ 410 (434)
.-...+..+++.|+ |.+.++.. .+| +||.+
T Consensus 320 ~~~~rp~~v~~~pd---------G~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 320 DRGQRIRDVRTGPD---------GYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp GGCCCEEEEEECTT---------SCEEEEECSTTE--EEEEE
T ss_pred CCCCceeEEEECCC---------CcEEEEEeCCCC--EEEEE
Confidence 33357889999988 77666433 445 44544
No 329
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.55 E-value=0.48 Score=43.78 Aligned_cols=246 Identities=8% Similarity=0.049 Sum_probs=127.5
Q ss_pred EEEEEEc---CCEEEEE-eCCCeEEEecCCCceeEeeccCC---CccEEEEEE-------eCC--EEEEEEcCC------
Q 046226 95 ILCIAVG---NGFIYTG-SDSNVIRIWKQPEFTECGRLKAK---TSMVVAMEV-------SHD--RVYAAYGDG------ 152 (434)
Q Consensus 95 v~~~~~~---~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~l~~-------~~~--~l~~~s~dg------ 152 (434)
...|+|+ +..|+.+ ...+.|++.|.+++.....+... -.....++| +++ .|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 4567774 3444444 44468999998887665544332 235789999 775 577776654
Q ss_pred -eEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCE-EEEEecCCcEEEEEcC------
Q 046226 153 -KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDT-LYSASLDKTIKVWRIR------ 224 (434)
Q Consensus 153 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~vwd~~------ 224 (434)
.|.+.+......... .. ....+. -......++++|++.. +++-..++.|..+|+.
T Consensus 221 ~~V~~i~r~~~G~~~~--------~~-~~~~v~--------~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~ 283 (496)
T 3kya_A 221 PSVYIIKRNADGTFDD--------RS-DIQLIA--------AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTI 283 (496)
T ss_dssp EEEEEEECCTTSCCST--------TS-CEEEEE--------EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHH
T ss_pred ceEEEEecCCCCceee--------cc-cceeec--------cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccc
Confidence 244554222111110 00 000000 1123456788995544 5555677889999997
Q ss_pred -CCee-----------EEE-cc-cCccCeEEEEEcCCC-e-EEEEeCCCeEEEEecccccCcce-eEEEEEe---cc---
Q 046226 225 -DSKC-----------IET-IQ-AHSEPINALVVADDG-V-LYSASDDATVRVWRRYFYSENQL-HTLILTL---TA--- 281 (434)
Q Consensus 225 -~~~~-----------~~~-~~-~~~~~v~~~~~~~~~-~-l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~---~~--- 281 (434)
++.. ... +. ........|+++|++ . +++-...+.|+.+|......... .....-. .+
T Consensus 284 ~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 284 KNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp HTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBC
T ss_pred cCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccC
Confidence 5543 112 11 123446799999999 4 44445678888877541111000 0111111 00
Q ss_pred ------cccCeE-EEEEe-------cCCCEEEEEcCCCeEEEEEcCcccccccccCc--------------ccC------
Q 046226 282 ------KYSPVK-TLTLT-------LDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGA--------------LQG------ 327 (434)
Q Consensus 282 ------~~~~v~-~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------~~~------ 327 (434)
...... .++.. .++.++++-.....|+.++... . ...+... ..+
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a 441 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-I-VSTYAGRGASTSLADGNQWGTDDGDLREVA 441 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-B-EEEEEESCTTHHHHHSCSCCCCCEETTTTC
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-C-EEEEecccccccccCccccccCCCCchhhh
Confidence 112234 45554 4566666667788899998432 1 1111100 001
Q ss_pred cccceEEEEeeC---CEEEEecCCCcEEEEeccCC
Q 046226 328 HTHAVMCLASVA---NYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 328 ~~~~v~~~~~~~---~~l~s~~~dg~i~iwd~~~~ 359 (434)
.-.....++++. +++++=..+..||.++++..
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 112345666653 35555556678888887754
No 330
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.33 E-value=0.42 Score=49.72 Aligned_cols=206 Identities=9% Similarity=0.075 Sum_probs=118.9
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEec
Q 046226 201 AINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLT 280 (434)
Q Consensus 201 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 280 (434)
-.+|..+.++.-. ..++.|+|+++...+..+.- ...|.-=.|-.+..|+..+ +..|..|++.. . ..+...+.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~---~--s~P~k~fd 143 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEG---E--SQPVKMFD 143 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc-CCeEEEeccCC---C--CccHHHHh
Confidence 3456666666554 67899999998877776654 3456666676666444443 34699999862 1 11111111
Q ss_pred cc----ccCeEEEEEecCCCEEEEEc-------CCCeEEEEEcCcccccccccCcccCcccceEEEEeeCC-----EEEE
Q 046226 281 AK----YSPVKTLTLTLDDGLLYGGC-------TDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVAN-----YVIS 344 (434)
Q Consensus 281 ~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~s 344 (434)
.| ...|..-..+++.++++..+ -.|.+.+|..+.. ..+.+.||.+.-..+...|+ .++.
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-----~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-----cchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 11 35677777788888876433 3688999986432 22345566655544444322 3332
Q ss_pred ecC---CCcEEEEeccCC--C--ce--eeEEEe-e--ccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 345 GSA---DSTSRVWAREQD--G--RH--TMLAVL-V--GHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 345 ~~~---dg~i~iwd~~~~--~--~~--~~~~~~-~--~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
+.. .+.++|-++... + .. +.+..+ . .-.+-..++..++. ..++...+.-|.|+++|+.+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k---------~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK---------HDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc---------cCEEEEEecCceEEEEeccc
Confidence 222 368899888543 1 00 000000 0 01222334555555 66788888999999999999
Q ss_pred CCccccccccccCceeEe
Q 046226 413 PKSSCGHLNKTNGHEYFE 430 (434)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~ 430 (434)
+..+. .+..++.+.|.
T Consensus 290 ~~~i~--~~ris~~~iF~ 305 (1630)
T 1xi4_A 290 GTCIY--MNRISGETIFV 305 (1630)
T ss_pred chhhh--hccccCCceEE
Confidence 97654 34455555444
No 331
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.19 E-value=0.96 Score=43.43 Aligned_cols=151 Identities=10% Similarity=0.040 Sum_probs=88.3
Q ss_pred ccEEEEEE--cCC-EEEEEeCCCeEEEecCCCcee-EeeccCCCccEEEEEEeC--CEEEEEE-cCCeEEEeecCCCCCc
Q 046226 93 GQILCIAV--GNG-FIYTGSDSNVIRIWKQPEFTE-CGRLKAKTSMVVAMEVSH--DRVYAAY-GDGKIRVWRSTWDNGV 165 (434)
Q Consensus 93 ~~v~~~~~--~~~-~l~tg~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~--~~l~~~s-~dg~i~vwd~~~~~~~ 165 (434)
+....++| .++ ++++-...+.|..+++..... ...+...-.....+++.. +.|+.+. ..+.|.+.+++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 34677888 344 444545567888888765432 222333335678888886 3555554 4788999887643221
Q ss_pred eeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec--CCcEEEEEcCCCeeEEEcccCccCeEEEE
Q 046226 166 KHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL--DKTIKVWRIRDSKCIETIQAHSEPINALV 243 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 243 (434)
.... ........|++.|.+.+|+.... .+.|...+++...........-.....|+
T Consensus 120 ~l~~----------------------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gla 177 (619)
T 3s94_A 120 VLFW----------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLT 177 (619)
T ss_dssp EEEC----------------------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred EEEe----------------------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEE
Confidence 1110 13344678999998766666553 35777777754332222223345678999
Q ss_pred EcCCC-eE-EEEeCCCeEEEEecc
Q 046226 244 VADDG-VL-YSASDDATVRVWRRY 265 (434)
Q Consensus 244 ~~~~~-~l-~s~~~dg~i~iwd~~ 265 (434)
+.+++ .| ++=...+.|..+|+.
T Consensus 178 ld~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 178 LDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EETTTTEEEEEETTTCCEEEESSS
T ss_pred EEccCCEEEEEeCCCCeEEEecCC
Confidence 99865 44 444556778888876
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.13 E-value=1 Score=43.94 Aligned_cols=195 Identities=8% Similarity=-0.018 Sum_probs=98.4
Q ss_pred cCCCEEEEEecC----CcEEEEEcCCCeeEEEc--------ccCccCeEEEEEcC-CC-eEEEEeCC------CeEEEEe
Q 046226 204 VSDDTLYSASLD----KTIKVWRIRDSKCIETI--------QAHSEPINALVVAD-DG-VLYSASDD------ATVRVWR 263 (434)
Q Consensus 204 ~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~--------~~~~~~v~~~~~~~-~~-~l~s~~~d------g~i~iwd 263 (434)
.++..++.|+.+ ..+.+||..+.+-...- ...... .+++..+ ++ .++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456777777753 46889998776432221 111112 2334442 55 66666643 2477888
Q ss_pred cccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCC--eEEEEEcCcccccccccCc---ccCcccceEEEEee
Q 046226 264 RYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDG--YIHYWHKGWFSAQLQYGGA---LQGHTHAVMCLASV 338 (434)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~---~~~~~~~v~~~~~~ 338 (434)
+.. ..+.....+..... -.+++...++.+++.|+.++ .+.+||..+.. +..... .........++.++
T Consensus 475 ~~t----~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 475 MKT----REWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp TTT----TEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEE
T ss_pred CCC----CcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEe
Confidence 761 22332222221111 12233324778888887654 68899976432 222111 11111111234444
Q ss_pred ---CCEEEEecC--C-----CcEEEEeccCCCc-----eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecC-
Q 046226 339 ---ANYVISGSA--D-----STSRVWAREQDGR-----HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLD- 402 (434)
Q Consensus 339 ---~~~l~s~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~D- 402 (434)
+..++.|+. + ..+.+||+.+..- +..+.........-.+++...+ +.+++.||.+
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~---------~~iyv~GG~~~ 618 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP---------RKLLIVGGTSP 618 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET---------TEEEEECCBCS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC---------CEEEEECCccC
Confidence 557777765 2 3588999988741 3333332111111123334442 4577777743
Q ss_pred -------CeEEEEecCCCCc
Q 046226 403 -------GVLKMWRVTRPKS 415 (434)
Q Consensus 403 -------g~v~iw~~~~~~~ 415 (434)
..|.+||+.+.+-
T Consensus 619 ~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp SCCCCTTTSEEEEETTTTEE
T ss_pred CCCCCCCCeEEEEECCCCeE
Confidence 4588999887643
No 333
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.85 E-value=0.88 Score=40.13 Aligned_cols=104 Identities=10% Similarity=0.028 Sum_probs=60.0
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee--EEEcc---cCccCeEEEEEcCC----CeEEEEeC-C-----CeE
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC--IETIQ---AHSEPINALVVADD----GVLYSASD-D-----ATV 259 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~---~~~~~v~~~~~~~~----~~l~s~~~-d-----g~i 259 (434)
.....++|.|+|++ +++..+|.|++++ .++. +..+. ........|+++|+ +.|+.+.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45679999999985 4555679999998 3432 22221 12456789999998 44444332 2 567
Q ss_pred EEEecccccCcceeEEEEEec---ccccCeEEEEEecCCCEEEEE
Q 046226 260 RVWRRYFYSENQLHTLILTLT---AKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~ 301 (434)
..|+...............+. ........++|.|+|.+.++.
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 777765110001112222232 111234689999999766654
No 334
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.78 E-value=0.93 Score=39.89 Aligned_cols=189 Identities=11% Similarity=0.067 Sum_probs=102.3
Q ss_pred CCeEEEEEecCCCEEEEE------------ecCCcEEEEEcCCC-eeEEEcc--c-----CccCeEEEEEcC--CC--eE
Q 046226 195 GPITSIAINVSDDTLYSA------------SLDKTIKVWRIRDS-KCIETIQ--A-----HSEPINALVVAD--DG--VL 250 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~------------~~dg~i~vwd~~~~-~~~~~~~--~-----~~~~v~~~~~~~--~~--~l 250 (434)
....++.+.++|..++++ ..+|.|.++|..+. .....+. + ..-....+.+.+ ++ +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345677777876555444 26899999998732 1122222 1 123566777755 34 45
Q ss_pred EEEe-C--CCeEEEEecccccCcceeEEEEEeccc-ccCeEEEEEecCCCEEEEEc-----------------CCCeEEE
Q 046226 251 YSAS-D--DATVRVWRRYFYSENQLHTLILTLTAK-YSPVKTLTLTLDDGLLYGGC-----------------TDGYIHY 309 (434)
Q Consensus 251 ~s~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~i 309 (434)
+.+. . +..|.+|++.. ..........+.+. ....+.+.+.++|.+.++.. ..|.|..
T Consensus 130 ~Vvnh~~~~s~ielf~~d~--~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQE--EEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEECSTTCCEEEEEEEET--TTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEECCCCCCeEEEEEEEC--CCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 5543 2 56788888762 22333344444332 34678999999998777654 1245555
Q ss_pred EEcCcccccccccCcccCcccceEEEEee--CCEEE-EecCCCcEEEEeccCCCceeeEEEeeccccceeEEEEee-ccc
Q 046226 310 WHKGWFSAQLQYGGALQGHTHAVMCLASV--ANYVI-SGSADSTSRVWAREQDGRHTMLAVLVGHRGPIRCAIAFL-GRF 385 (434)
Q Consensus 310 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 385 (434)
+|.. ... .+...-.....++++ ++.|+ +-+..+.|+.|++...+.......+. ..+..-.+++.+ +
T Consensus 208 ~d~~----~~~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~-- 277 (355)
T 3sre_A 208 YSPN----DVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVT-- 277 (355)
T ss_dssp ECTT----CCE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTT--
T ss_pred EECC----eEE---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCC--
Confidence 5531 111 111112234566665 55544 44567899999987543333333331 234445566655 3
Q ss_pred CCCCCCcccEEEEeecC
Q 046226 386 GEETEDEYCTICTGSLD 402 (434)
Q Consensus 386 ~~~~~~~~~~l~s~~~D 402 (434)
|++.+++..+
T Consensus 278 -------G~lwva~~~~ 287 (355)
T 3sre_A 278 -------GDLWVGCHPN 287 (355)
T ss_dssp -------CCEEEEEESC
T ss_pred -------CcEEEEecCC
Confidence 6666655433
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.044 Score=47.89 Aligned_cols=146 Identities=15% Similarity=0.195 Sum_probs=79.8
Q ss_pred CCEEEEEecCCcEEEEEcCCCeeEEEcccC-ccCeEEEEE---cCCCeEEEE--eCCCeEEEEecccccCcceeEEEEEe
Q 046226 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAH-SEPINALVV---ADDGVLYSA--SDDATVRVWRRYFYSENQLHTLILTL 279 (434)
Q Consensus 206 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~---~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~ 279 (434)
+..++.++.||.|.-+|..+|+.+.+++.. ..++....- ..++.++.+ +.||.|..+|... + ........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~--G--~~~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ--G--LQKLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT--E--EEEEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC--C--cEEeeecc
Confidence 457889999999999999999999998754 122222110 013333333 6899999998752 1 11122221
Q ss_pred cc--cccCeEE---EEE-e----cCCCEEEEEcCCCeEEEEEcCcccccccccCccc-Ccc--cceEEEE-------eeC
Q 046226 280 TA--KYSPVKT---LTL-T----LDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQ-GHT--HAVMCLA-------SVA 339 (434)
Q Consensus 280 ~~--~~~~v~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~--~~v~~~~-------~~~ 339 (434)
.. ...++.. ..+ . ..+..+++|+.+|.+...|+.+.+...++..... ++- ....|.. ..+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence 11 1112211 000 0 1456889999999999999988776666532211 100 0011111 124
Q ss_pred CEEEEecCCCcEEEEe
Q 046226 340 NYVISGSADSTSRVWA 355 (434)
Q Consensus 340 ~~l~s~~~dg~i~iwd 355 (434)
..++.+..+..+.+.+
T Consensus 166 ~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS 181 (339)
T ss_dssp CEEEEEEEEEECEECC
T ss_pred CeEEEecceEEEEEEC
Confidence 5666666666666665
No 336
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.59 E-value=0.93 Score=38.52 Aligned_cols=223 Identities=16% Similarity=0.145 Sum_probs=116.9
Q ss_pred cEEEEEEcCCEEEEEeCCCeEEEecCCCceeEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeec
Q 046226 94 QILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATI 173 (434)
Q Consensus 94 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~ 173 (434)
.|..++......+.-. ||.|..|-....-.+..-......|..++......++-. ||.|..|-.........
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~------ 96 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV------ 96 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC------
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC------
Confidence 3556666333333334 889999865432211111112336777877777444445 99999997654322211
Q ss_pred cCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEE
Q 046226 174 PKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSA 253 (434)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 253 (434)
|. .-...|..++... ...+.-. ||.|+.|-....-.+..-......|..++......++.
T Consensus 97 P~----------------~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l- 156 (282)
T 3qhy_B 97 PA----------------EARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV- 156 (282)
T ss_dssp CG----------------GGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE-
T ss_pred Cc----------------ccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE-
Confidence 00 1124677777653 3444445 89999997654222211112234677777654443333
Q ss_pred eCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceE
Q 046226 254 SDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVM 333 (434)
Q Consensus 254 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 333 (434)
. ||.|..|-....... . ........|..++.... ..++. .||.|+.|-........... .....|.
T Consensus 157 ~-~G~v~~wG~n~~gql--g----~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~ 222 (282)
T 3qhy_B 157 K-NGGVIAWGDNYFGQT--T----VPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVS 222 (282)
T ss_dssp E-TTEEEEEECCTTSTT--S----CCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCC
T ss_pred E-CCEEEEecCCCCCCC--C----CceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCc----ccCCCce
Confidence 3 799999964421111 1 00111245666665433 22333 59999999754322221111 1123466
Q ss_pred EEEeeCCEEEEecCCCcEEEEeccCC
Q 046226 334 CLASVANYVISGSADSTSRVWAREQD 359 (434)
Q Consensus 334 ~~~~~~~~l~s~~~dg~i~iwd~~~~ 359 (434)
.++....+.+.-. ||.|+.|=....
T Consensus 223 ~i~~G~~h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 223 AIASGEWYSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp EEEECSSCEEEEE-TTEEEEESTTCC
T ss_pred EEEcCCCEEEEEE-CCEEEEecCCCC
Confidence 6766555544445 999999976654
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.47 E-value=0.069 Score=43.07 Aligned_cols=108 Identities=10% Similarity=0.016 Sum_probs=64.6
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee------EEEcc--cCccCeEEEEEcCCCeEEEEeCCCeEEEEeccc
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC------IETIQ--AHSEPINALVVADDGVLYSASDDATVRVWRRYF 266 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------~~~~~--~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~ 266 (434)
..+.+++|+|++.+.++ .+|.++-.+..+... -..+- +-. ...++.|.+++.|..+ .||.|.-++...
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 36779999998886666 678877777644221 11110 111 2478999999966665 669888776431
Q ss_pred ccCcc-eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEE
Q 046226 267 YSENQ-LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIH 308 (434)
Q Consensus 267 ~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 308 (434)
..... .......-...-..+..|.+.|+|.+.++. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 11110 001111112222467899999999887777 77754
No 338
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.29 E-value=1.4 Score=38.75 Aligned_cols=178 Identities=11% Similarity=0.081 Sum_probs=96.9
Q ss_pred CCCeEEEecCCCc--ee-EeeccC-----CCccEEEEEEeC---C--EEEEEEc---CCeEEEeecCCCCCceeeEeeec
Q 046226 110 DSNVIRIWKQPEF--TE-CGRLKA-----KTSMVVAMEVSH---D--RVYAAYG---DGKIRVWRSTWDNGVKHVKLATI 173 (434)
Q Consensus 110 ~dg~i~iwd~~~~--~~-~~~~~~-----~~~~v~~l~~~~---~--~l~~~s~---dg~i~vwd~~~~~~~~~~~~~~~ 173 (434)
.+|.|.++|..+. +. ...+.+ ..-....+.+.+ + +|+++.. +..|.+|+++......... ...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE-EEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE-ecc
Confidence 6899999998732 21 111222 123556666644 1 4555533 4567777765433221110 000
Q ss_pred cCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe-----------------cCCcEEEEEcCCCeeEEEcccCc
Q 046226 174 PKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS-----------------LDKTIKVWRIRDSKCIETIQAHS 236 (434)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-----------------~dg~i~vwd~~~~~~~~~~~~~~ 236 (434)
. ...-...+++.+.++|.+.++.. ..|.|..+|. ++ +..+...-
T Consensus 160 ~----------------g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l 220 (355)
T 3sre_A 160 R----------------HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGF 220 (355)
T ss_dssp C----------------CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEE
T ss_pred c----------------cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCC
Confidence 0 01234678999999998776653 1245555554 33 22232333
Q ss_pred cCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec-CCCEEEEEcCC-CeEEEEE
Q 046226 237 EPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL-DDGLLYGGCTD-GYIHYWH 311 (434)
Q Consensus 237 ~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-g~i~i~d 311 (434)
..-+.++|+||+ ++++-+..+.|..|++... ... .....+ ......-.+++++ +|++.+++..+ +.|..|+
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~--g~l-~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHAN--WTL-TPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT--SCE-EEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCC--CcE-ecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 467899999999 4455556789999998621 111 111122 1235677889998 58877755433 3444444
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.18 E-value=1.3 Score=37.65 Aligned_cols=225 Identities=13% Similarity=0.107 Sum_probs=119.8
Q ss_pred cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe
Q 046226 134 MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS 213 (434)
Q Consensus 134 ~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 213 (434)
.|..++......+.-. ||.|..|-......+... ......|..++..... .++. .
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p----------------------~~~~~~i~~ia~G~~h-s~~l-~ 79 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMP----------------------AATQSGVDAIAAGNYH-SLAL-K 79 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCC----------------------GGGGSCCCEEEECSSE-EEEE-E
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCC----------------------ccCCCCEEEEEeCCCE-EEEE-E
Confidence 5777877777444446 999999976543322210 0123356677664332 2333 4
Q ss_pred cCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcceeEEEEEecccccCeEEEEEec
Q 046226 214 LDKTIKVWRIRDSKCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPVKTLTLTL 293 (434)
Q Consensus 214 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 293 (434)
||.|+.|-....-.+..-..-...|..++......++ -. ||.|..|-...... .. ........|..++...
T Consensus 80 -~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~a-l~-~G~v~~wG~n~~gq--lg----~~~~~~~~i~~i~~G~ 150 (282)
T 3qhy_B 80 -DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYA-LK-DGKVIAWGDDSDGQ--TT----VPAEAQSGVTALDGGV 150 (282)
T ss_dssp -TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEE-EE-TTEEEEEECCTTST--TS----CCGGGGSSEEEEEECS
T ss_pred -CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEE-Ee-CCeEEEecCCCCCc--CC----CCccCCCCeEEEEccc
Confidence 8999999765422111111113467778776554333 34 89999996442111 11 0111234566665543
Q ss_pred CCCEEEEEcCCCeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCceeeEEEeecccc
Q 046226 294 DDGLLYGGCTDGYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGRHTMLAVLVGHRG 373 (434)
Q Consensus 294 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 373 (434)
+ +.+.-. ||.|+.|-.......... ..-...|..++....+.+.- .||.|+.|-.....+.- .-.....
T Consensus 151 ~--~~~~l~-~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg---~p~~~~~ 219 (282)
T 3qhy_B 151 Y--TALAVK-NGGVIAWGDNYFGQTTVP----AEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTT---VPTEALS 219 (282)
T ss_dssp S--EEEEEE-TTEEEEEECCTTSTTSCC----GGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTC---CCGGGGS
T ss_pred C--EEEEEE-CCEEEEecCCCCCCCCCc----eecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCC---CCcccCC
Confidence 2 333334 799999975432221111 11124577777766655555 69999999765542211 0011123
Q ss_pred ceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCCCCc
Q 046226 374 PIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTRPKS 415 (434)
Q Consensus 374 ~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~ 415 (434)
.|..++.-.. ..++. . ||.|+.|--....+
T Consensus 220 ~v~~i~~G~~----------h~~al-~-~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 220 GVSAIASGEW----------YSLAL-K-NGKVIAWGSSRTAP 249 (282)
T ss_dssp SCCEEEECSS----------CEEEE-E-TTEEEEESTTCCCC
T ss_pred CceEEEcCCC----------EEEEE-E-CCEEEEecCCCCcc
Confidence 4666665433 22333 3 99999998776544
No 340
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.04 E-value=2.9 Score=36.78 Aligned_cols=205 Identities=12% Similarity=0.043 Sum_probs=104.1
Q ss_pred cccEEEEEE--cCCEEEEEeCCCeEEEecCCCce-eEeecc---CCCccEEEEEEeCC-----EEEEEEc----C----C
Q 046226 92 DGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFT-ECGRLK---AKTSMVVAMEVSHD-----RVYAAYG----D----G 152 (434)
Q Consensus 92 ~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~---~~~~~v~~l~~~~~-----~l~~~s~----d----g 152 (434)
-..-..|+| +|+ |+++..+|.|++++ .+++ .+..+. ........|+++|+ .|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345678888 565 55566679999997 3444 222221 22356889999985 6666543 2 5
Q ss_pred eEEEeecCCCC-CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec-------------CCcE
Q 046226 153 KIRVWRSTWDN-GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL-------------DKTI 218 (434)
Q Consensus 153 ~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i 218 (434)
.|..|+..... .....+ .+.........| ....|+|.|||.++++.+. .|.|
T Consensus 106 ~v~r~~~~~~~~~~~~~~------------~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I 171 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVK------------TLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKI 171 (354)
T ss_dssp EEEEEEECSSSCCEEEEE------------EEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEE
T ss_pred EEEEEEECCCCcCcCccE------------EEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEE
Confidence 66666655331 111110 000000000123 3467999999987766442 2456
Q ss_pred EEEEcCCC---------eeEEEcccCccCeEEEEEcC-CCeEEEEeCCC----eEEEEecccc------cC----cceeE
Q 046226 219 KVWRIRDS---------KCIETIQAHSEPINALVVAD-DGVLYSASDDA----TVRVWRRYFY------SE----NQLHT 274 (434)
Q Consensus 219 ~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg----~i~iwd~~~~------~~----~~~~~ 274 (434)
.-++.... ..+.. .++. ....++|.+ ++.|+++.... .|.+...-.. .. .....
T Consensus 172 ~ri~~dG~~p~~npf~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 249 (354)
T 3a9g_A 172 LRVDEEGRPPADNPFPNSPIWS-YGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVD 249 (354)
T ss_dssp EEECTTSCCCTTSSSTTCCEEE-ECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred EEEcCCCCCCCCCCCCCCcEEE-EccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcC
Confidence 55555321 01111 1232 345899999 56555544322 2333221000 00 00011
Q ss_pred EEEEecccccCeEEEEEe-------cCCCEEEEEcCCCeEEEEEcCc
Q 046226 275 LILTLTAKYSPVKTLTLT-------LDDGLLYGGCTDGYIHYWHKGW 314 (434)
Q Consensus 275 ~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~dg~i~i~d~~~ 314 (434)
....+.........++|. .+|.++++.-..+.|...++..
T Consensus 250 p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 250 PVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 112221122356778873 4677777777778888888764
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.96 E-value=2.2 Score=41.69 Aligned_cols=150 Identities=8% Similarity=0.000 Sum_probs=77.5
Q ss_pred CCCEEEEEecC------CcEEEEEcCCCee--EEEcccCccCeEEEEEcCCC-eEEEEeCCC--eEEEEecccccCccee
Q 046226 205 SDDTLYSASLD------KTIKVWRIRDSKC--IETIQAHSEPINALVVADDG-VLYSASDDA--TVRVWRRYFYSENQLH 273 (434)
Q Consensus 205 ~~~~l~s~~~d------g~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg--~i~iwd~~~~~~~~~~ 273 (434)
++..++.|+.+ ..+.+||..+.+- +..+...... .+++...++ +++.|+.++ .+.+||+. ...+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~----t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVT----EEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETT----TTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECC----CCce
Confidence 67777777654 3588899887542 2222211122 233332245 777777654 68888876 1223
Q ss_pred EEEEE---ecccccCeEEEEEecC-CCEEEEEcC--C-----CeEEEEEcCcccc----cccccCcc-cCcccceEEEEe
Q 046226 274 TLILT---LTAKYSPVKTLTLTLD-DGLLYGGCT--D-----GYIHYWHKGWFSA----QLQYGGAL-QGHTHAVMCLAS 337 (434)
Q Consensus 274 ~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~~----~~~~~~~~-~~~~~~v~~~~~ 337 (434)
..... ..........+.+..+ +.+++.|+. + ..+.+||+....- .+...... ........+...
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~ 605 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI 605 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE
T ss_pred EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe
Confidence 32221 1111122233555554 566777765 2 4688999875541 01111110 011112234455
Q ss_pred e-CCEEEEecCC--------CcEEEEeccCC
Q 046226 338 V-ANYVISGSAD--------STSRVWAREQD 359 (434)
Q Consensus 338 ~-~~~l~s~~~d--------g~i~iwd~~~~ 359 (434)
. +.+++.|+.+ ..+.+||+.+.
T Consensus 606 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 606 TPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp ETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 6 7777777743 46899999875
No 342
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.84 E-value=2.3 Score=43.10 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=57.1
Q ss_pred cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEecc--ccccCcCCCeEEEEEecCCCEEEE
Q 046226 134 MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGK--DKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 134 ~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
+..-.+.+++.++++..||.+.-.+-+...............-...++.+.... ..-..-...+.+++..++..++++
T Consensus 173 p~~l~av~~~~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lft 252 (950)
T 4gq2_M 173 PDLMAAISTSEICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVM 252 (950)
T ss_dssp EEEEEECSSSEEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEE
T ss_pred ceEEEEEcCCeEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEE
Confidence 444556677888888888776655433332222111111111111222222100 000112345778888888899999
Q ss_pred EecCCcEEEEEcCCCeeEEEcc
Q 046226 212 ASLDKTIKVWRIRDSKCIETIQ 233 (434)
Q Consensus 212 ~~~dg~i~vwd~~~~~~~~~~~ 233 (434)
-+.|+++++|++.+++++.+..
T Consensus 253 l~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 253 LSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EETTCEEEEEETTTTEEEEEEE
T ss_pred EECCCEEEEEECCCCCeEeeec
Confidence 9999999999999999887753
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.71 E-value=3.3 Score=36.24 Aligned_cols=154 Identities=15% Similarity=0.137 Sum_probs=82.6
Q ss_pred eEEEeeccccEEEEEE--cCCEEEEEeCCCeEEEecCCCcee--Eeec----cCCCccEEEEEEeCC-----EEEEEE--
Q 046226 85 ISSVLKKDGQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTE--CGRL----KAKTSMVVAMEVSHD-----RVYAAY-- 149 (434)
Q Consensus 85 ~~~~~~h~~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~--~~~~----~~~~~~v~~l~~~~~-----~l~~~s-- 149 (434)
+..+...-..-+.|+| +|+++++--..|.|++++..+++. +..+ .........|+++|+ .|++.-
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 3334444456789999 777777665589999998655443 2222 123566899999985 454432
Q ss_pred -cCCeEEEeecCCCC----CceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEec----------
Q 046226 150 -GDGKIRVWRSTWDN----GVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASL---------- 214 (434)
Q Consensus 150 -~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---------- 214 (434)
.++.|.-|.+.... ..... ..+.........| .-..|+|.|||.++++.+.
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~------------~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~ 169 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAP------------DTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDR 169 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCC------------EEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCT
T ss_pred CCCCEEEEEEeCCCCcccccCCCc------------EEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCC
Confidence 34455555544321 11000 0111000001123 3567999999987777542
Q ss_pred ---CCcEEEEEcCCC---------eeEEEcccCccCeEEEEEcCCCeEEEEe
Q 046226 215 ---DKTIKVWRIRDS---------KCIETIQAHSEPINALVVADDGVLYSAS 254 (434)
Q Consensus 215 ---dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~~l~s~~ 254 (434)
.|.|.-.+.... ..+.. .+|.. ...++|.|++.|.++.
T Consensus 170 ~~~~G~IlRi~~dG~ip~~nPf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 170 KSLGGKILRMTPDGEPAPGNPFPGSPVYS-YGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCSTTCEEEECTTSSBCTTCSSTTCCEEE-BCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCCCEEEEEeCCCCccCCCCCCCCeEEe-eCCCC-cceEEECCCCCEEEEe
Confidence 345555555321 11211 13433 4588999988555544
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.37 E-value=4 Score=37.37 Aligned_cols=109 Identities=8% Similarity=0.095 Sum_probs=61.3
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCee--EEEccc------CccCeEEEEEcC----CCeEEEEeC------
Q 046226 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKC--IETIQA------HSEPINALVVAD----DGVLYSASD------ 255 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~------~~~~v~~~~~~~----~~~l~s~~~------ 255 (434)
-.....|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+++| ++.|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34567999999998666654435798888655543 223321 245678999999 454433332
Q ss_pred -------CCeEEEEecccccCc--ceeEEEEEecc-cccCeEEEEEecCCCEEEEEc
Q 046226 256 -------DATVRVWRRYFYSEN--QLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 256 -------dg~i~iwd~~~~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 302 (434)
...|.-|++...... ....+...+.. .......|+|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554311100 11112212221 123578999999998777644
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.20 E-value=5.6 Score=34.81 Aligned_cols=242 Identities=10% Similarity=0.016 Sum_probs=119.3
Q ss_pred CccEEEEEEeCC-EEEEEEc-CCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecC---C
Q 046226 132 TSMVVAMEVSHD-RVYAAYG-DGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---D 206 (434)
Q Consensus 132 ~~~v~~l~~~~~-~l~~~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~ 206 (434)
-..-+.|+|.|+ .++++.. .|.|++++...+.. ..+ ..++ ............|+++|+ +
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v--~~~~-------------~v~~~g~~GllGia~~Pdf~~~ 94 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TEL--GEVP-------------GVSPSGEGGLLGIALSPDYASD 94 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEE--EECT-------------TCCCBTTBSEEEEEECTTHHHH
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eee--cccC-------------ceeecCCCCceeeEeccccccC
Confidence 345688999998 6666666 89999887543322 111 1110 011124566889999995 4
Q ss_pred CEEEEE---ecCCcEEEEEcCCC----------eeE-EEcc-cCccCeEEEEEcCCC-eEEEEeC-------------CC
Q 046226 207 DTLYSA---SLDKTIKVWRIRDS----------KCI-ETIQ-AHSEPINALVVADDG-VLYSASD-------------DA 257 (434)
Q Consensus 207 ~~l~s~---~~dg~i~vwd~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~-~l~s~~~-------------dg 257 (434)
..|+.. ..++.|.-|.+..+ +.+ ..+. .....-..|.|.|++ ++++.+. .|
T Consensus 95 g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G 174 (347)
T 3das_A 95 HMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGG 174 (347)
T ss_dssp CEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTT
T ss_pred CEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCC
Confidence 555543 23456666766541 111 1222 112234679999999 4444332 24
Q ss_pred eEEEEecccc--cCcce-eEEEEEecccccCeEEEEEecCCCEEEEEc-CCCeEEEEEcCccccc-c----------c--
Q 046226 258 TVRVWRRYFY--SENQL-HTLILTLTAKYSPVKTLTLTLDDGLLYGGC-TDGYIHYWHKGWFSAQ-L----------Q-- 320 (434)
Q Consensus 258 ~i~iwd~~~~--~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-~----------~-- 320 (434)
.|.-.+.... ..... ...+. -.++ .....++|+|+|.+.++-. .|+.=.|.-+.....- + .
T Consensus 175 ~IlRi~~dG~ip~~nPf~~~~i~-a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~ 252 (347)
T 3das_A 175 KILRMTPDGEPAPGNPFPGSPVY-SYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFH 252 (347)
T ss_dssp CEEEECTTSSBCTTCSSTTCCEE-EBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCC
T ss_pred EEEEEeCCCCccCCCCCCCCeEE-eeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCcccc
Confidence 4444444310 00000 01111 1223 3456889999876555432 2332222222211100 0 0
Q ss_pred -ccCcccCcccceEEEEee-CCEEEEecCCCcEEEEeccCCCc-eeeEEEeeccccceeEEEEeecccCCCCCCcccEEE
Q 046226 321 -YGGALQGHTHAVMCLASV-ANYVISGSADSTSRVWAREQDGR-HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTIC 397 (434)
Q Consensus 321 -~~~~~~~~~~~v~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~ 397 (434)
....+..+......+++. +..+...-..+.|....+...+. .+....+.+..+.+..|+..|+ |.+++
T Consensus 253 ~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD---------G~lyv 323 (347)
T 3das_A 253 DPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG---------DKLWL 323 (347)
T ss_dssp CCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET---------TEEEE
T ss_pred CCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC---------CcEEE
Confidence 000111111245667775 44555555556676666665421 1122234444578899999998 66655
Q ss_pred Eee
Q 046226 398 TGS 400 (434)
Q Consensus 398 s~~ 400 (434)
+.+
T Consensus 324 ~td 326 (347)
T 3das_A 324 VTS 326 (347)
T ss_dssp EEC
T ss_pred EEc
Confidence 543
No 346
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=92.12 E-value=6.2 Score=35.19 Aligned_cols=257 Identities=11% Similarity=0.082 Sum_probs=132.9
Q ss_pred cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe
Q 046226 134 MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS 213 (434)
Q Consensus 134 ~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 213 (434)
.|..++......++...||.|..|-......+..- .. ..... ..... .-....+..++++......+.-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g------~~-~~~~~-p~~v~--~~~~~~~~~v~i~~G~~h~~al~ 123 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIG------GT-ESVST-PTLLE--SIQHVFIKKVAVNSGGKHCLALS 123 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSS------SS-CCEEE-EEECG--GGTTSCEEEEEECTTCSEEEEEE
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCC------Cc-CCccC-CEEcc--cccCCceeEEEECcCCCeEEEEc
Confidence 46677766677777888999999964432111100 00 00000 00000 01223455566666667777778
Q ss_pred cCCcEEEEEcCCC-----------eeEEEccc-CccCeEEEEEcCCCeEEEEeCCCeEEEEeccccc------CcceeEE
Q 046226 214 LDKTIKVWRIRDS-----------KCIETIQA-HSEPINALVVADDGVLYSASDDATVRVWRRYFYS------ENQLHTL 275 (434)
Q Consensus 214 ~dg~i~vwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~ 275 (434)
.||.|+.|-.... .....+.. ....|..++.... ..++...||.|..|=..... ......+
T Consensus 124 ~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p 202 (389)
T 3kci_A 124 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA-HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP 202 (389)
T ss_dssp TTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS-EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEE
T ss_pred CCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcC-eEEEEeCCCeEEEeCCCCCCCcCCCCCcccccc
Confidence 8999999965321 01111111 1235666665433 55666789999999543111 0111111
Q ss_pred EEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc-------ccCccc-CcccceEEEEeeCCEEEEecC
Q 046226 276 ILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ-------YGGALQ-GHTHAVMCLASVANYVISGSA 347 (434)
Q Consensus 276 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~-~~~~~v~~~~~~~~~l~s~~~ 347 (434)
..........|..++......+.++-..||.|+.|-......... ....+. .....|..++....+.++-..
T Consensus 203 ~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~ 282 (389)
T 3kci_A 203 KLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 282 (389)
T ss_dssp EECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEET
T ss_pred eEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeC
Confidence 111112223566666544345666777899999996432211100 000000 111246777777777777788
Q ss_pred CCcEEEEeccCCCc--------eeeEEEeec-cccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 348 DSTSRVWAREQDGR--------HTMLAVLVG-HRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 348 dg~i~iwd~~~~~~--------~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
||.|+.|=.....+ ......+.. ....|..++.- ....+....||.|+.|-...
T Consensus 283 ~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G-----------~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 283 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG-----------SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp TSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC-----------SSEEEEEETTCCEEEEECCT
T ss_pred CCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec-----------cCeEEEECCCCCEEEeeCCC
Confidence 99999996543110 011111111 12345555554 33555667899999998764
No 347
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=89.64 E-value=11 Score=33.89 Aligned_cols=254 Identities=11% Similarity=0.011 Sum_probs=128.3
Q ss_pred cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEe
Q 046226 134 MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSAS 213 (434)
Q Consensus 134 ~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 213 (434)
.|..|+......++...||.|..|-......+..-... ......... ......|..|+.. ....+.-.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~---~~~~~~P~~-------v~~~~~i~~va~G--~~hs~al~ 143 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSE---DGSESKPDL-------IDLPGKALCISAG--DSHSACLL 143 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCS---TTSSSSCEE-------CCCSSCEEEEEEC--SSEEEEEE
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcC---CccccCCeE-------EcCCCCEEEEEcC--cCeEEEEe
Confidence 47788877778888889999999965433221111000 000000000 0122356666543 45556667
Q ss_pred cCCcEEEEEc--C-CCee---------EEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCc-----------
Q 046226 214 LDKTIKVWRI--R-DSKC---------IETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSEN----------- 270 (434)
Q Consensus 214 ~dg~i~vwd~--~-~~~~---------~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~----------- 270 (434)
.||.|+.|-. . .++. ..........|..|+.... ..++-..||.|..|=.......
T Consensus 144 ~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~ 222 (423)
T 3mvd_K 144 EDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD-HLVILTTAGKVFTVGCAEQGQLGRLSERSISGE 222 (423)
T ss_dssp TTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTSSCCTTTTTSC
T ss_pred CCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCC-eEEEEecCCeEEEeeCCcCCccCCCcccccccc
Confidence 7899999975 2 2221 1111112345666665433 5556678899999953211000
Q ss_pred ------ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc-------ccCcccCcccceEEEEe
Q 046226 271 ------QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ-------YGGALQGHTHAVMCLAS 337 (434)
Q Consensus 271 ------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~v~~~~~ 337 (434)
....+..........|..++... ...++.-..+|.|+.|-......... ...........|..++.
T Consensus 223 ~~~~~~~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~ 301 (423)
T 3mvd_K 223 GRRGKRDLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG 301 (423)
T ss_dssp STTTTTTTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE
T ss_pred cccccccccCCeEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc
Confidence 00011111112223455555442 22333336889999996543211100 00000001235667776
Q ss_pred eCCEEEEecCCCcEEEEeccCCC---------ceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEE
Q 046226 338 VANYVISGSADSTSRVWAREQDG---------RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMW 408 (434)
Q Consensus 338 ~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw 408 (434)
...+.+.-..||.|+.|=..... .......+..-...|..|+.-. ...+.-..||.|+.|
T Consensus 302 G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~-----------~hs~alt~~G~v~~w 370 (423)
T 3mvd_K 302 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE-----------VCSYAVTIDGKLYSW 370 (423)
T ss_dssp CSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET-----------TEEEEEETTSCEEEE
T ss_pred ccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC-----------CeEEEEcCCCCEEEE
Confidence 67777777889999999653211 0111122222223566666553 344455789999999
Q ss_pred ecCC
Q 046226 409 RVTR 412 (434)
Q Consensus 409 ~~~~ 412 (434)
-...
T Consensus 371 G~n~ 374 (423)
T 3mvd_K 371 GSGV 374 (423)
T ss_dssp ECCT
T ss_pred CCCC
Confidence 7654
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.38 E-value=9.9 Score=35.52 Aligned_cols=142 Identities=10% Similarity=-0.019 Sum_probs=78.4
Q ss_pred CeEEEEEcCCC--eEEEEeCCCeEEEEecccccC-------cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEE
Q 046226 238 PINALVVADDG--VLYSASDDATVRVWRRYFYSE-------NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIH 308 (434)
Q Consensus 238 ~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 308 (434)
....+.++||| .++++-.+.++.++|+..... .......... .........+|.++|+...+-.-|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCCCcccEEEECCCCceEeeeeecceEE
Confidence 34578889999 455555788999999873211 0111112222 2334567889999996666667899999
Q ss_pred EEEcCccc------ccccccCcccCcccceEEEE-------eeCCEEEEec---CCCcE----------EEEeccCCCce
Q 046226 309 YWHKGWFS------AQLQYGGALQGHTHAVMCLA-------SVANYVISGS---ADSTS----------RVWAREQDGRH 362 (434)
Q Consensus 309 i~d~~~~~------~~~~~~~~~~~~~~~v~~~~-------~~~~~l~s~~---~dg~i----------~iwd~~~~~~~ 362 (434)
.|++.... ........+.-|-.+-.-.+ .+|++|++.. .|..+ .++|+.. .+.
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG-dkM 481 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG-DEM 481 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS-SSC
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC-Cce
Confidence 99986421 11111222223322222221 3467877764 35443 7777754 344
Q ss_pred eeEEEeeccccceeEEEEe
Q 046226 363 TMLAVLVGHRGPIRCAIAF 381 (434)
Q Consensus 363 ~~~~~~~~h~~~v~~~~~~ 381 (434)
+++........+=.++.+.
T Consensus 482 ~lv~D~P~~~EPHda~~v~ 500 (638)
T 3sbq_A 482 KLVHDGPTFAEPHDCIMAR 500 (638)
T ss_dssp EEEEEEEESSCCCCEEEEE
T ss_pred EEEecCCCCCCCcceEEec
Confidence 6665554444443334333
No 349
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=88.28 E-value=11 Score=32.18 Aligned_cols=244 Identities=11% Similarity=0.080 Sum_probs=119.5
Q ss_pred CCEEEEEeCCCeEEEecCCCceeEe---------eccCCCccEEEEEEeC-CEEEEEEcCCeEEEeecCCCCCceeeEee
Q 046226 102 NGFIYTGSDSNVIRIWKQPEFTECG---------RLKAKTSMVVAMEVSH-DRVYAAYGDGKIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 102 ~~~l~tg~~dg~i~iwd~~~~~~~~---------~~~~~~~~v~~l~~~~-~~l~~~s~dg~i~vwd~~~~~~~~~~~~~ 171 (434)
..++++.+.+|.|+--.+.+.+... .++.+..-+..+..+. +.++..+..|.+.-.....
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~e---------- 72 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQ---------- 72 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGG----------
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhH----------
Confidence 4567888999999877665432211 1222222222222232 3777777777755544321
Q ss_pred eccCCCCceeEEEeccccccCcCCCeEEEEEe---cCCCEEEEEecCCcEEEEEcCC-------CeeEEEcccCccCeEE
Q 046226 172 TIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN---VSDDTLYSASLDKTIKVWRIRD-------SKCIETIQAHSEPINA 241 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~~ 241 (434)
+|..+....-.......-......|..+... .++.+++..+.+|.++...+.. +.....+..+ +.+..
T Consensus 73 -lp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~ 150 (307)
T 1zi0_A 73 -LPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIG 150 (307)
T ss_dssp -SCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEE
T ss_pred -CcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEE
Confidence 1111100000000000001233445555432 3466889999999999997742 2222233334 44444
Q ss_pred EEEc-CCCeEEEEeCCCeEEEEecccccCc---ceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccc
Q 046226 242 LVVA-DDGVLYSASDDATVRVWRRYFYSEN---QLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSA 317 (434)
Q Consensus 242 ~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 317 (434)
+... .+..++..+.+|.+..++....... ........+. ....|.++....++..+++.+..|.++-.++.....
T Consensus 151 ~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~ 229 (307)
T 1zi0_A 151 VDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPT 229 (307)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCC
T ss_pred EEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhcc
Confidence 4443 3447888888999888876522111 1111111222 234566665555566788889999999887743321
Q ss_pred cc-----cccCcccCcccceEEEEe-e-CCEEEEecCCCcEEEEeccC
Q 046226 318 QL-----QYGGALQGHTHAVMCLAS-V-ANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 318 ~~-----~~~~~~~~~~~~v~~~~~-~-~~~l~s~~~dg~i~iwd~~~ 358 (434)
.. .....+....+.+..+.. . ...++..+.+|.+.-++...
T Consensus 230 ~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 230 KSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 11 111112222234443333 2 34555666677666666544
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.68 E-value=16 Score=33.29 Aligned_cols=106 Identities=14% Similarity=0.181 Sum_probs=58.3
Q ss_pred ccEEEEEEeCC-EEEEEEcCC-eEEEeecCCCCCceeeEeeeccCCCCceeEEEecccccc--CcCCCeEEEEEecC---
Q 046226 133 SMVVAMEVSHD-RVYAAYGDG-KIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMM--KHMGPITSIAINVS--- 205 (434)
Q Consensus 133 ~~v~~l~~~~~-~l~~~s~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~--- 205 (434)
...+.|+|.|+ .++++...+ .|++++...+.. ..+ ..++. .+. ........|+|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-~~~--~~~~~-------------~~~~~~g~~Gllgia~~Pdf~~ 90 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTV--FQVPE-------------IVNDADGQNGLLGFAFHPDFKN 90 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEE--EECTT-------------CCCCTTSSCSEEEEEECTTTTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-eEE--ecCCc-------------cccccCCCCceeEEEECCCcCc
Confidence 35679999998 677777765 688876543321 111 11110 000 13456789999996
Q ss_pred CCEEEEEec-------------CCcEEEEEcCCC-------eeEE-Eccc-CccCeEEEEEcCCC-eEEEEe
Q 046226 206 DDTLYSASL-------------DKTIKVWRIRDS-------KCIE-TIQA-HSEPINALVVADDG-VLYSAS 254 (434)
Q Consensus 206 ~~~l~s~~~-------------dg~i~vwd~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~-~l~s~~ 254 (434)
+..|+.... ...|.-+++... +.+. .+.. .......|+|.++| ++++.+
T Consensus 91 ~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 91 NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp SCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 666665542 235666665322 1111 1221 12356899999999 444433
No 351
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.36 E-value=14 Score=31.08 Aligned_cols=201 Identities=10% Similarity=0.052 Sum_probs=109.5
Q ss_pred ccEEEEEE--cCCEEEEEeCCCeEEE---ecCCCceeEeeccCCCccEEEEEEe--C-CEEEEEEcCCeEEEeecCCCCC
Q 046226 93 GQILCIAV--GNGFIYTGSDSNVIRI---WKQPEFTECGRLKAKTSMVVAMEVS--H-DRVYAAYGDGKIRVWRSTWDNG 164 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~~dg~i~i---wd~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~~~s~dg~i~vwd~~~~~~ 164 (434)
+.+..+.. ..+.|+.-+.+|.++- |+++.......+. ....|..+... + ..++.++.+|.++-..+..-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~- 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE- 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-
Confidence 34554444 4555666667776654 4544332111133 34556665433 2 389999999999988765432
Q ss_pred ceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCC---------CeeEEEcccC
Q 046226 165 VKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRD---------SKCIETIQAH 235 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~ 235 (434)
...- + ...+. ....+.+..+........++..+..|.++.+.... |.....+..
T Consensus 102 ~~~~--------G--~~~i~------lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~- 164 (276)
T 3no0_A 102 YKAQ--------G--MPIIK------LTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK- 164 (276)
T ss_dssp TCST--------T--EECSC------CCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-
T ss_pred hhcC--------C--eEEEe------cCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-
Confidence 1100 0 00000 01334555555555666888888899988887642 222222332
Q ss_pred ccCeEEEEEcCCC-eEEEEeCCCeEEEEecccccCcce-eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEE--EE
Q 046226 236 SEPINALVVADDG-VLYSASDDATVRVWRRYFYSENQL-HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHY--WH 311 (434)
Q Consensus 236 ~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i--~d 311 (434)
.+.|..+...+++ .++..+..|.++...+........ ..-...+ ...+.+..+....++..++..+.+|.+.. ++
T Consensus 165 ~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~ 243 (276)
T 3no0_A 165 NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKIN 243 (276)
T ss_dssp TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeC
Confidence 3456555544444 888899999999988763322111 1111122 23344554444344456777777888877 77
Q ss_pred cC
Q 046226 312 KG 313 (434)
Q Consensus 312 ~~ 313 (434)
..
T Consensus 244 ~~ 245 (276)
T 3no0_A 244 QK 245 (276)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.34 E-value=2.4 Score=44.08 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=32.9
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeEEEcc
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCIETIQ 233 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 233 (434)
..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345666777888999999999999999999999988754
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.87 E-value=20 Score=31.72 Aligned_cols=193 Identities=9% Similarity=0.032 Sum_probs=89.4
Q ss_pred CCEEEEEeCCCeEEEecCC---CceeEeeccCCCccEEEEEEeC---CEEEEEEcCC----eEEEeecCCCCCceeeEee
Q 046226 102 NGFIYTGSDSNVIRIWKQP---EFTECGRLKAKTSMVVAMEVSH---DRVYAAYGDG----KIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 102 ~~~l~tg~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~l~~~~---~~l~~~s~dg----~i~vwd~~~~~~~~~~~~~ 171 (434)
...|+.|...|.+++-+-. +.+..... .....|.+|++.| +.+++++..| .|...+ +.++....+...
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 4467777777744333221 22322211 2245699999987 3677777665 343321 222221111100
Q ss_pred -eccCCCCceeEEEeccccccCcCCCeEEEEEecC--CCEEEEEecCCcEEEEEcCCCeeEEEccc--------------
Q 046226 172 -TIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS--DDTLYSASLDKTIKVWRIRDSKCIETIQA-------------- 234 (434)
Q Consensus 172 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------------- 234 (434)
.++.. ... ........|.++++.|. ...|+++...+.|...+- .++.-..+..
T Consensus 100 ~~~~~~--~~~-------~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~ 169 (394)
T 3b7f_A 100 PAFNKA--PEG-------ETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGE 169 (394)
T ss_dssp CCCCCC--C-----------CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC
T ss_pred ccCCCc--ccc-------cccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCcccccccccc
Confidence 00000 000 00002235788888862 566777766666665532 2332222211
Q ss_pred -----CccCeEEEEEcCC--CeEEEEeCCCeEEEEecccccCcceeEEEEE-eccc---------ccCeEEEEEecC-CC
Q 046226 235 -----HSEPINALVVADD--GVLYSASDDATVRVWRRYFYSENQLHTLILT-LTAK---------YSPVKTLTLTLD-DG 296 (434)
Q Consensus 235 -----~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~---------~~~v~~~~~~~~-~~ 296 (434)
....+.+|.+.|. +.++.+..++.|...+ ........... .... ...+..+.++|. ..
T Consensus 170 ~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~----DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~ 245 (394)
T 3b7f_A 170 QDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST----DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPD 245 (394)
T ss_dssp ----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES----STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTT
T ss_pred ccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC----CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCC
Confidence 1235788999873 3555555555444332 11122222110 0000 134788999885 46
Q ss_pred EEEEEcCCCeEEEEE
Q 046226 297 LLYGGCTDGYIHYWH 311 (434)
Q Consensus 297 ~l~~~~~dg~i~i~d 311 (434)
.|+++...+ |...+
T Consensus 246 ~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 246 ILYQQNHCG-IYRMD 259 (394)
T ss_dssp EEEEEETTE-EEEEE
T ss_pred EEEEEcCCe-EEEeC
Confidence 677776554 44443
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.63 E-value=24 Score=32.29 Aligned_cols=109 Identities=10% Similarity=0.012 Sum_probs=60.8
Q ss_pred CCeEEEEEecCCC-EEEEEecCCcEEEEEcCCC---eeEEEccc---------CccCeEEEEEcCC----C-eEEEEeC-
Q 046226 195 GPITSIAINVSDD-TLYSASLDKTIKVWRIRDS---KCIETIQA---------HSEPINALVVADD----G-VLYSASD- 255 (434)
Q Consensus 195 ~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~---~~~~~~~~---------~~~~v~~~~~~~~----~-~l~s~~~- 255 (434)
...+.|+|.|++. .|+++...|.|++++.... ..+..+.. .......|+++|+ + ++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568899999986 5666777899999975422 12222211 1456789999996 4 3333221
Q ss_pred -C----------CeEEEEeccccc-C---cceeEEEEEec--ccccCeEEEEEecCCCEEEEEcC
Q 046226 256 -D----------ATVRVWRRYFYS-E---NQLHTLILTLT--AKYSPVKTLTLTLDDGLLYGGCT 303 (434)
Q Consensus 256 -d----------g~i~iwd~~~~~-~---~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 303 (434)
+ ..|.-|.+.... . ....+.+.... ........|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 134445543110 0 01112222222 22235688999999987766554
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=83.57 E-value=21 Score=30.84 Aligned_cols=163 Identities=9% Similarity=-0.005 Sum_probs=92.2
Q ss_pred CCCeEEEEEec---CCCEEEEEecCCcEEEEEcCCC-------eeEEEcccCccCeEEEEE-cCCCeEEEEeCCCeEEEE
Q 046226 194 MGPITSIAINV---SDDTLYSASLDKTIKVWRIRDS-------KCIETIQAHSEPINALVV-ADDGVLYSASDDATVRVW 262 (434)
Q Consensus 194 ~~~v~~~~~~~---~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~dg~i~iw 262 (434)
...|..+...+ +..+++..+.+|.|+...+... .....++.. +.+..+.. ..+..++..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34555554433 5789999999999999887542 222234433 34444444 334478888889988877
Q ss_pred ecc--cccC---cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc-----cccCcccCcccce
Q 046226 263 RRY--FYSE---NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL-----QYGGALQGHTHAV 332 (434)
Q Consensus 263 d~~--~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~v 332 (434)
... .... .........+. ....|.++...+++..++..+..|.++.-.+....... .....+......+
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~l 251 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRL 251 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSE
T ss_pred ECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeE
Confidence 665 2111 11111111222 23456666666666789999999999988865433221 1111221212234
Q ss_pred EEEE-ee-CCEEEEecCCCcEEEEeccC
Q 046226 333 MCLA-SV-ANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 333 ~~~~-~~-~~~l~s~~~dg~i~iwd~~~ 358 (434)
..+. .+ .+.++..+.+|.+.-++...
T Consensus 252 v~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 252 VGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 3332 33 34666777788877777654
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.07 E-value=35 Score=34.61 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=31.6
Q ss_pred cEEEEEEeCC--EEEEEEcCCeEEEeecCCCCCceeeEee
Q 046226 134 MVVAMEVSHD--RVYAAYGDGKIRVWRSTWDNGVKHVKLA 171 (434)
Q Consensus 134 ~v~~l~~~~~--~l~~~s~dg~i~vwd~~~~~~~~~~~~~ 171 (434)
.+.+++..++ .+++.+.|+++|+|++.+++.+....+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 5677777776 8999999999999999998887776654
No 357
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.95 E-value=23 Score=30.90 Aligned_cols=50 Identities=10% Similarity=0.108 Sum_probs=31.1
Q ss_pred ccEEEEEE--cCCEEEEEeCCCeEEEecCCCceeE---eec----cCCCccEEEEEEeCC
Q 046226 93 GQILCIAV--GNGFIYTGSDSNVIRIWKQPEFTEC---GRL----KAKTSMVVAMEVSHD 143 (434)
Q Consensus 93 ~~v~~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~---~~~----~~~~~~v~~l~~~~~ 143 (434)
..-..|+| +|+.|+++...|.|++++.. +... ..+ .........|+++|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 34678898 67734555668999999853 3321 111 122345789999984
No 358
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=81.04 E-value=29 Score=30.74 Aligned_cols=251 Identities=10% Similarity=0.112 Sum_probs=126.6
Q ss_pred cEEEEEEcCCEEEEEeCCCeEEEecCCCc-----------eeEeeccC-CCccEEEEEEeC--CEEEEEEcCCeEEEeec
Q 046226 94 QILCIAVGNGFIYTGSDSNVIRIWKQPEF-----------TECGRLKA-KTSMVVAMEVSH--DRVYAAYGDGKIRVWRS 159 (434)
Q Consensus 94 ~v~~~~~~~~~l~tg~~dg~i~iwd~~~~-----------~~~~~~~~-~~~~v~~l~~~~--~~l~~~s~dg~i~vwd~ 159 (434)
.|..++......+.-..||.|..|-.... .....+.. ....+..++++. +..++...||.|..|-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 46666666666666678899999953221 11111211 222344455543 46677788999999965
Q ss_pred CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-e----------e
Q 046226 160 TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-K----------C 228 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~----------~ 228 (434)
.....+..-. . .. ......... -....|..|+. .....+.-..||.|+.|-.... + .
T Consensus 134 n~~GqLG~g~------~-~~-~~~p~~v~~--l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~ 201 (389)
T 3kci_A 134 AEDGKLGHGN------R-SP-CDRPRVIES--LRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 201 (389)
T ss_dssp CGGGTTCSSS------C-CC-EEEEEECGG--GTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEE
T ss_pred CCCCcCCCCC------C-cc-CcCCeEecc--cCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCccccc
Confidence 4321111000 0 00 000000000 01224555554 3455666677899999965321 1 0
Q ss_pred EEEcc-cCccCeEEEEEcCC-CeEEEEeCCCeEEEEecccccC-----cceeEEEEEecc-cccCeEEEEEecCCCEEEE
Q 046226 229 IETIQ-AHSEPINALVVADD-GVLYSASDDATVRVWRRYFYSE-----NQLHTLILTLTA-KYSPVKTLTLTLDDGLLYG 300 (434)
Q Consensus 229 ~~~~~-~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 300 (434)
...+. .....|..++.... ...+.-..||.|..|-...... ............ ....|..++.. ..+.++
T Consensus 202 p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~a 279 (389)
T 3kci_A 202 PKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVA 279 (389)
T ss_dssp EEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEE
T ss_pred ceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEE
Confidence 11111 12345667776542 3666677899999995431111 011111112221 12235555543 345555
Q ss_pred EcCCCeEEEEEcCcccccc--------cccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 301 GCTDGYIHYWHKGWFSAQL--------QYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 301 ~~~dg~i~i~d~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
-..+|.|+.|-........ ............|..++....+.++...||.|+.|=...
T Consensus 280 lt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 280 LTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred EeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 5789999999653221100 000000011134677777777777778999999997654
No 359
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=80.08 E-value=33 Score=30.67 Aligned_cols=293 Identities=11% Similarity=0.082 Sum_probs=149.8
Q ss_pred cccEEEEEEcCCEEEEEeCCCeEEEecCCC-c----------eeEeecc-CCCccEEEEEEeCCEEEEEEcC-CeEEEee
Q 046226 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPE-F----------TECGRLK-AKTSMVVAMEVSHDRVYAAYGD-GKIRVWR 158 (434)
Q Consensus 92 ~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~-~----------~~~~~~~-~~~~~v~~l~~~~~~l~~~s~d-g~i~vwd 158 (434)
...|..++......+.-..||.|..|-... + .....+. .....|..++...+..++...| +.|..|-
T Consensus 15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 94 (406)
T ss_dssp CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence 345777777666666667789999994322 1 1112221 1234688888777766656666 4999996
Q ss_pred cCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-e----------
Q 046226 159 STWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-K---------- 227 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~---------- 227 (434)
......+..- .... ... ..... .-....|..|+.. ..+.+.-..||.|+.|-.... +
T Consensus 95 ~n~~GqLG~g------~~~~-~~~-p~~v~--~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~ 162 (406)
T 4d9s_A 95 WGDFGRLGHG------NSSD-LFT-PLPIK--ALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSL 162 (406)
T ss_dssp CCGGGTTCSS------SCCC-EEE-EEECG--GGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEE
T ss_pred CCCCcCCCCC------CCCc-ccc-ceEec--ccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcc
Confidence 4322111100 0000 000 00000 0122356666653 455666678999999975431 1
Q ss_pred eEEEccc-CccCeEEEEEcCCCeEEEEeCCCeEEEEecccccC------cceeEEEEEecccccCeEEEEEecCCCEEEE
Q 046226 228 CIETIQA-HSEPINALVVADDGVLYSASDDATVRVWRRYFYSE------NQLHTLILTLTAKYSPVKTLTLTLDDGLLYG 300 (434)
Q Consensus 228 ~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 300 (434)
....+.. ....|..++.... +.++-..+|.|..|-...... .....+..........|..++. ...+.++
T Consensus 163 ~p~~v~~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~ht~~ 239 (406)
T 4d9s_A 163 VPQKIQAFEGIRIKMVAAGAE-HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--GWRHTIS 239 (406)
T ss_dssp EEEECGGGTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--CSSEEEE
T ss_pred cceEecccCCCcEEEEecCCC-eEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--CCCcEEE
Confidence 1111111 1235666665433 555567899999995331110 1111111111112234555544 3455556
Q ss_pred EcCCCeEEEEEcCcccccc----------cccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccCCCc---------
Q 046226 301 GCTDGYIHYWHKGWFSAQL----------QYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQDGR--------- 361 (434)
Q Consensus 301 ~~~dg~i~i~d~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------- 361 (434)
-..+|.|+.|-........ .....+ ....|..++....+.++-..||.|+.|=.....+
T Consensus 240 l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~--~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~ 317 (406)
T 4d9s_A 240 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEAL--SNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ 317 (406)
T ss_dssp EETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGG--TTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCE
T ss_pred EcCCCCEEEeeCCCCCCCCCCCCcCccccEEeccc--CCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCC
Confidence 6788999999643221110 000111 1234666766667777778899999996543211
Q ss_pred eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEEEecCC
Q 046226 362 HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKMWRVTR 412 (434)
Q Consensus 362 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~ 412 (434)
..+..........|..++.- ....+.-..||.|+.|=-..
T Consensus 318 ~~p~~v~~~~~~~v~~va~G-----------~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 318 CSPVQVRFPDDQKVVQVSCG-----------WRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp EEEEEECCGGGCCEEEEEEC-----------SSEEEEEETTSCEEEEECCT
T ss_pred ccCEEEeccCCCcEEEEEeC-----------CCeEEEEeCCCCEEEecCCC
Confidence 11111111123356555554 33556667899999998654
No 360
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=80.04 E-value=33 Score=30.76 Aligned_cols=249 Identities=10% Similarity=0.070 Sum_probs=130.7
Q ss_pred ccEEEEEEcCCEEEEEeCCCeEEEecCCCc-e------------eEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEeec
Q 046226 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEF-T------------ECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWRS 159 (434)
Q Consensus 93 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~-~------------~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~ 159 (434)
..|..|+..+...+.-..||.|..|-.... + ....+. ....|..|+......++...||.|..|-.
T Consensus 75 ~~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 75 PDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SSEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CCceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCcCeEEEEeCCCeEEEEeC
Confidence 347788887777777788999999954321 1 011111 23467788877777777889999999975
Q ss_pred --CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-----------
Q 046226 160 --TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS----------- 226 (434)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----------- 226 (434)
.....+..- ..... .... . ......|..|+.. ....+.-..||.|+.|-....
T Consensus 154 ~~n~~GqlG~~------~~~~~-~~p~----~-~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~ 219 (423)
T 3mvd_K 154 FRDSHGNMGLT------IDGNK-RTPI----D-LMEGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQLGRLSERSI 219 (423)
T ss_dssp EECSSSEEESB------TTBCE-EEEE----E-SSTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTSSCCTTTT
T ss_pred CCCCCCCcCcC------CCCCC-ceee----E-ecCCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCccCCCccccc
Confidence 222111100 00000 0000 0 0123356666653 455666677899999964321
Q ss_pred ------------eeEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccC-----cceeEEEEEecccccCeEEE
Q 046226 227 ------------KCIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSE-----NQLHTLILTLTAKYSPVKTL 289 (434)
Q Consensus 227 ------------~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~v~~~ 289 (434)
.+..........|..++......++.-..+|.|..|-...... ................|..+
T Consensus 220 ~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~i 299 (423)
T 3mvd_K 220 SGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHI 299 (423)
T ss_dssp TSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEE
T ss_pred ccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEE
Confidence 1111111122345666655333444446889999995432110 00000111111112356555
Q ss_pred EEecCCCEEEEEcCCCeEEEEEcCccccc--------ccccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 290 TLTLDDGLLYGGCTDGYIHYWHKGWFSAQ--------LQYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
+. ...+.++-..||.|+.|-....... ......+..-...|..++....+.++-..||.|+.|=...
T Consensus 300 a~--G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 300 AG--GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EE--CSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCT
T ss_pred Ec--ccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCC
Confidence 54 3455566678999999964322100 0000011111126777777777777778999999997554
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.75 E-value=35 Score=30.21 Aligned_cols=112 Identities=10% Similarity=0.039 Sum_probs=55.6
Q ss_pred CCCeEEEEEec-CCCEEEEEecCC----cEEEEEcCCCeeEEEccc--------------CccCeEEEEEcC---CCeEE
Q 046226 194 MGPITSIAINV-SDDTLYSASLDK----TIKVWRIRDSKCIETIQA--------------HSEPINALVVAD---DGVLY 251 (434)
Q Consensus 194 ~~~v~~~~~~~-~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~--------------~~~~v~~~~~~~---~~~l~ 251 (434)
...|.+|++.| +...|++++..| .|...+ +.++.-..+.. ....|.++++.| .+.++
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35689999998 344455555555 444432 23332222211 112477888875 34666
Q ss_pred EEeCCCeEEEEecccccCcceeEEEEEec----------------ccccCeEEEEEecC-CCEEEEEcCCCeEEEE
Q 046226 252 SASDDATVRVWRRYFYSENQLHTLILTLT----------------AKYSPVKTLTLTLD-DGLLYGGCTDGYIHYW 310 (434)
Q Consensus 252 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~ 310 (434)
+++..+.|...+ ............. .....+.+|.++|. ...|+.+..++.|...
T Consensus 133 ~g~~~ggl~~S~----DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 133 AGTSPQGLFRST----DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEETTEEEEES----STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEecCCcEEEEc----CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 666666555442 1122222221110 11235778889873 4555666555545443
No 362
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.46 E-value=21 Score=33.41 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=68.2
Q ss_pred CCeEEEEEecCCCEEEEEe-cCCcEEEEEcCCC------ee-------EEEcccCccCeEEEEEcCCC-eEEEEeCCCeE
Q 046226 195 GPITSIAINVSDDTLYSAS-LDKTIKVWRIRDS------KC-------IETIQAHSEPINALVVADDG-VLYSASDDATV 259 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~------~~-------~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i 259 (434)
.....+.++|||+++++++ .+.++.++|++.. +. +.... -.-.....+|.++| ...+-.-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceE
Confidence 3445678899999988765 5779999999742 11 22222 23355678999999 55556689999
Q ss_pred EEEecccc----cCcceeEEEEEecccccCeEEEE-----EecCCCEEEEEc
Q 046226 260 RVWRRYFY----SENQLHTLILTLTAKYSPVKTLT-----LTLDDGLLYGGC 302 (434)
Q Consensus 260 ~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~ 302 (434)
.-|++... .+......+..+.-|..+-.-.+ -.++|++|++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 99998632 23333455555555544332222 246788888764
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=78.11 E-value=36 Score=30.08 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=77.7
Q ss_pred eEEEeecCCC--CCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEe---cC----CCEEEEEe-cCCcEEEEE
Q 046226 153 KIRVWRSTWD--NGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAIN---VS----DDTLYSAS-LDKTIKVWR 222 (434)
Q Consensus 153 ~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~----~~~l~s~~-~dg~i~vwd 222 (434)
.|.+||+.++ +.++.+.+... .. .....+..+.+. +. +.+.+.+. ..+.|.|+|
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~---------------~~-~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVyd 187 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTR---------------LV-EKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYD 187 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGG---------------GC-CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHH---------------hc-ccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEE
Confidence 4667777776 66655544211 11 123456777776 22 34444443 357899999
Q ss_pred cCCCeeEEEccc----C--------------ccCeEEEEEcCC----C-eEEEEe-CCCeEEEEecccccCcceeEEEEE
Q 046226 223 IRDSKCIETIQA----H--------------SEPINALVVADD----G-VLYSAS-DDATVRVWRRYFYSENQLHTLILT 278 (434)
Q Consensus 223 ~~~~~~~~~~~~----~--------------~~~v~~~~~~~~----~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~ 278 (434)
+.+++..+.+.. . ...+..|+++|+ + .|.-.. ....+.--.............+..
T Consensus 188 l~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~ 267 (381)
T 3q6k_A 188 HKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPEL 267 (381)
T ss_dssp TTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEE
T ss_pred CCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEE
Confidence 998876554421 0 136778888876 4 343333 333343333221112111111111
Q ss_pred e--cccccCeEEEEEe-cCCCEEEEEcCCCeEEEEEcCc
Q 046226 279 L--TAKYSPVKTLTLT-LDDGLLYGGCTDGYIHYWHKGW 314 (434)
Q Consensus 279 ~--~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~ 314 (434)
+ .+.......++++ .+|.++++--....|..|+...
T Consensus 268 ~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 268 LGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred eeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 1 1111334456775 5777777778889999999753
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=76.45 E-value=40 Score=29.78 Aligned_cols=181 Identities=13% Similarity=0.164 Sum_probs=96.2
Q ss_pred eEEEecCCCc--eeEeeccC------CCccEEEEEEe---C-----C-EEEEEE-cCCeEEEeecCCCCCceeeEeeecc
Q 046226 113 VIRIWKQPEF--TECGRLKA------KTSMVVAMEVS---H-----D-RVYAAY-GDGKIRVWRSTWDNGVKHVKLATIP 174 (434)
Q Consensus 113 ~i~iwd~~~~--~~~~~~~~------~~~~v~~l~~~---~-----~-~l~~~s-~dg~i~vwd~~~~~~~~~~~~~~~~ 174 (434)
.|.+||+.+. +.++++.- ....+..+.+. + + ..+.+. ..+.|.|+|+.+++..+...-...+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999998 88877643 24567888887 1 2 344443 4788999999887665544211111
Q ss_pred CCCCceeEEEeccccccCcCCCeEEEEEecC----CCEEEEEecCCcEEEEEcC-----CC---eeEEEcccC--ccCeE
Q 046226 175 KTGGAVRNLIVGKDKMMKHMGPITSIAINVS----DDTLYSASLDKTIKVWRIR-----DS---KCIETIQAH--SEPIN 240 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~s~~~dg~i~vwd~~-----~~---~~~~~~~~~--~~~v~ 240 (434)
. ....+...-..+ .-...|..|+++|+ ++.|+-....+ -++|.+. .. ..++.+... ...-.
T Consensus 204 d---~~~~~~i~G~~~-~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~ 278 (381)
T 3q6k_A 204 E---RPTKFDYGGKEY-EFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAI 278 (381)
T ss_dssp C---SCEEEEETTEEE-EECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEE
T ss_pred c---cCcceEECCEEe-EeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcc
Confidence 1 111111111111 12357999999998 67777665444 2333332 11 122222111 12333
Q ss_pred EEEEc-CCC-eEEEEeCCCeEEEEeccc-ccCcceeEEEEEecccccCeEEEEEecCCCEEE
Q 046226 241 ALVVA-DDG-VLYSASDDATVRVWRRYF-YSENQLHTLILTLTAKYSPVKTLTLTLDDGLLY 299 (434)
Q Consensus 241 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 299 (434)
.+++. .+| ++++--....|..|+... .-.......+..-. .-..+..+.+..+|.+.+
T Consensus 279 ~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv 339 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWF 339 (381)
T ss_dssp EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEE
T ss_pred eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEE
Confidence 45665 567 666667788999999762 11111222222222 333456666655554333
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.61 E-value=9.2 Score=36.93 Aligned_cols=95 Identities=9% Similarity=0.031 Sum_probs=54.2
Q ss_pred cEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCC--CCceeEEEeccccccCcCCCeEEEEEecCCCEEEE
Q 046226 134 MVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKT--GGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 134 ~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
+-.-++.+++.++++-.||.+.-.+-...... ....+... ...++.+..+.. .......|.++.+ +..++++
T Consensus 163 Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~---~~~~Fnd~s~l~SL~~lf~~~~-~~~~~~~Is~~~~--~~~fLft 236 (729)
T 3f7f_A 163 PHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHY---EPLLFNDNSYLKCLTRFFSRSS-KSDYDSVISCKLF--HERYLIV 236 (729)
T ss_dssp EEEEEECSSSBEEEEETTSCEECCEESSSSCE---ECCCCCCCGGGGGGSTTCCTTC-SSCCCCEEEEEEE--TTTEEEE
T ss_pred CcEEEEECCCeEEEEEcCCCEEEEEeccCCCc---ceeeecCCchhhhhHHhhcCCC-CCCcCceEEEecc--CCcEEEE
Confidence 44556667778888888887766654433221 11111111 011111111110 1112234555544 4789999
Q ss_pred EecCCcEEEEEcCCCeeEEEccc
Q 046226 212 ASLDKTIKVWRIRDSKCIETIQA 234 (434)
Q Consensus 212 ~~~dg~i~vwd~~~~~~~~~~~~ 234 (434)
-+.|.++|+|++.+++++....-
T Consensus 237 L~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 237 LTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTCEEEEEETTTTEEEEEEET
T ss_pred EEcCCeEEEEEcCCCceEEeecc
Confidence 99999999999999998877654
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.44 E-value=5.2 Score=38.59 Aligned_cols=37 Identities=16% Similarity=0.340 Sum_probs=30.3
Q ss_pred ccEEEEEEcCCEEEEEeCCCeEEEecCCCceeEeecc
Q 046226 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTECGRLK 129 (434)
Q Consensus 93 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 129 (434)
..|.|+.++..+|+|-+.|.++|+||+.+++++....
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4577777788899999999999999999988776644
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=74.21 E-value=41 Score=28.77 Aligned_cols=201 Identities=12% Similarity=0.116 Sum_probs=109.0
Q ss_pred cCCEEEEEeCCCeEEEecCCCceeE---------eeccCCCccEEEEEEeC-CEEEEEEcCCeEEEeecCCCCCceeeEe
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFTEC---------GRLKAKTSMVVAMEVSH-DRVYAAYGDGKIRVWRSTWDNGVKHVKL 170 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~~~---------~~~~~~~~~v~~l~~~~-~~l~~~s~dg~i~vwd~~~~~~~~~~~~ 170 (434)
+..++++.+.+|.|+--.+...... ..++....-+..+..+. +.++..+..|.++-.....-......
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~-- 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA-- 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc--
Confidence 4567888999999987755432211 12233333333333333 47888888888776654311000000
Q ss_pred eeccCCCCceeEEEeccccccCcCCCeEEEEEec---CCCEEEEEecCCcEEEEEcCC-------CeeEEEcccCccCeE
Q 046226 171 ATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV---SDDTLYSASLDKTIKVWRIRD-------SKCIETIQAHSEPIN 240 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~ 240 (434)
..|..+.... . ......|..+...+ +..+|+..+.+|.++...+.. |.....+.. .+.+.
T Consensus 85 ----~~G~~i~~~l----~-l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv 154 (312)
T 1suu_A 85 ----SKGQNISELI----N-LGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVT 154 (312)
T ss_dssp -------CBGGGTS----C-CCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEE
T ss_pred ----CCCcChhhcc----C-CCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEE
Confidence 0000000000 0 12334455554433 467788889999999988743 222333443 44555
Q ss_pred EEEEcC-CCeEEEEeCCCeEEEEeccccc---CcceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCc
Q 046226 241 ALVVAD-DGVLYSASDDATVRVWRRYFYS---ENQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGW 314 (434)
Q Consensus 241 ~~~~~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 314 (434)
.+.... +..++..+.+|.+..+...... ..........+.. ...+..+....++..+++.+..|..+..++..
T Consensus 155 ~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 155 SAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 555543 3478889999999999876311 1111222222222 34566665555567788889999999998753
No 368
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=72.71 E-value=44 Score=28.42 Aligned_cols=99 Identities=10% Similarity=0.032 Sum_probs=52.3
Q ss_pred EEEecCCCEEEEEec-CCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEEEEeCC--CeEEEEecccccCcceeEE
Q 046226 200 IAINVSDDTLYSASL-DKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLYSASDD--ATVRVWRRYFYSENQLHTL 275 (434)
Q Consensus 200 ~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d--g~i~iwd~~~~~~~~~~~~ 275 (434)
.+++++++.|+-.+. ...|.+.++..+.....+.+ ... ..+.|++ .|+-...+ ..|..-++. +.... .
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld---G~~~~-~ 221 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN---NPNPV-V 221 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSS---SCCCE-E
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECC---CCCeE-E
Confidence 346777888875554 67899989876654433332 222 3355766 55444332 345444444 11111 1
Q ss_pred EEEecccccCeEEEEEecCCCEEEEEcC--CCeEEEEEcC
Q 046226 276 ILTLTAKYSPVKTLTLTLDDGLLYGGCT--DGYIHYWHKG 313 (434)
Q Consensus 276 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~ 313 (434)
+. ...+ ..++|++.+|+-+.. .+.|..-++.
T Consensus 222 ---Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 222 ---LT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp ---CS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred ---Ee--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 11 1223 237778888876532 3556666654
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=69.76 E-value=48 Score=27.71 Aligned_cols=205 Identities=12% Similarity=0.045 Sum_probs=112.3
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEE---cCCCeeEEEcccCccCeEEEEEc--CCCeEEEEeCCCeEEEEecccccC
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWR---IRDSKCIETIQAHSEPINALVVA--DDGVLYSASDDATVRVWRRYFYSE 269 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd---~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~ 269 (434)
+.+..+.......+|+.-+.+|.++--. +..+.....+. ....|..+... ++..++..+.+|.++...+.....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 3455555555566677777788776543 32221111133 34566666443 223899999999999998764431
Q ss_pred cceeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccc-----ccccCcccCcccceEEEE-ee-CCEE
Q 046226 270 NQLHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ-----LQYGGALQGHTHAVMCLA-SV-ANYV 342 (434)
Q Consensus 270 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~-~~-~~~l 342 (434)
.........+. ....+..+........++..+..|.+..++...-... ......+... ..|.++. .. +..+
T Consensus 103 ~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 103 KAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSGLRIWNGEPYL 180 (276)
T ss_dssp CSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEEEEEESSCSEE
T ss_pred hcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEEEEEeCCCCEE
Confidence 11111111222 2345555555556668888899999988876422111 1111122222 3454443 33 4588
Q ss_pred EEecCCCcEEEEeccCCCc----eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCeEEE--EecCC
Q 046226 343 ISGSADSTSRVWAREQDGR----HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGVLKM--WRVTR 412 (434)
Q Consensus 343 ~s~~~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~v~i--w~~~~ 412 (434)
+..+..|.++...+..-.. ..-+..+ ...+.+..+....+ ...++..+.+|.+.. +++..
T Consensus 181 l~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~---------~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 181 LVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE---------EVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS---------EEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC---------CCEEEEEcCCCeEEEeeeCHHH
Confidence 8899999999888754210 0112222 22344554443333 446777778888887 87654
No 370
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=63.87 E-value=80 Score=28.08 Aligned_cols=251 Identities=12% Similarity=0.081 Sum_probs=126.8
Q ss_pred ccEEEEEEcCCEEEEEeCC-CeEEEecCCCc-----------eeEeecc-CCCccEEEEEEeCCEEEEEEcCCeEEEeec
Q 046226 93 GQILCIAVGNGFIYTGSDS-NVIRIWKQPEF-----------TECGRLK-AKTSMVVAMEVSHDRVYAAYGDGKIRVWRS 159 (434)
Q Consensus 93 ~~v~~~~~~~~~l~tg~~d-g~i~iwd~~~~-----------~~~~~~~-~~~~~v~~l~~~~~~l~~~s~dg~i~vwd~ 159 (434)
..|..++......+.-..| +.|..|-.... .....+. .....|..|+......++...||.|..|-.
T Consensus 68 ~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~ 147 (406)
T 4d9s_A 68 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR 147 (406)
T ss_dssp SCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCC
Confidence 3577888844444444444 59999943221 1111111 123468888877777788889999999975
Q ss_pred CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCC-e---------e-
Q 046226 160 TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDS-K---------C- 228 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~---------~- 228 (434)
.....+..-. ... ......... -....|..++.. ..+.+.-..+|.|+.|-.... + .
T Consensus 148 n~~GqLG~g~------~~~--~~~p~~v~~--~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~ 215 (406)
T 4d9s_A 148 NQNGQLGLGD------TED--SLVPQKIQA--FEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV 215 (406)
T ss_dssp CTTSTTCSSS------CCC--EEEEEECGG--GTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEE
T ss_pred CCCccCCCCC------CCC--cccceEecc--cCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCc
Confidence 4332221100 000 000000000 012246665543 455666677899999964321 1 0
Q ss_pred EEEccc-CccCeEEEEEcCCCeEEEEeCCCeEEEEecccccC-----cceeEEEEEec-ccccCeEEEEEecCCCEEEEE
Q 046226 229 IETIQA-HSEPINALVVADDGVLYSASDDATVRVWRRYFYSE-----NQLHTLILTLT-AKYSPVKTLTLTLDDGLLYGG 301 (434)
Q Consensus 229 ~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 301 (434)
...+.. ....|..++.... ..+.-..+|.|..|-...... ........... .....|..++. ...+.++-
T Consensus 216 p~~v~~~~~~~i~~va~G~~-ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~--G~~hs~al 292 (406)
T 4d9s_A 216 PERVTSTGGEKMSMVACGWR-HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG--GWRHTMAL 292 (406)
T ss_dssp EEECCCSTTCCEEEEEECSS-EEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEE
T ss_pred cEEecccCCceEEEEEECCC-cEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe--cCCEEEEE
Confidence 111111 1235666655433 455556889999995431110 00111111111 11223555544 34555566
Q ss_pred cCCCeEEEEEcCcccccc--------cccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 302 CTDGYIHYWHKGWFSAQL--------QYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 302 ~~dg~i~i~d~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
..||.|+.|=........ ............|..++....+.++-..||.|+.|=...
T Consensus 293 t~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 293 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp ETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred cCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCC
Confidence 788999999643211110 000000012235677777677777778899999997554
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=63.59 E-value=71 Score=27.43 Aligned_cols=242 Identities=9% Similarity=0.036 Sum_probs=122.8
Q ss_pred cCCEEEEEeCCCeEEEecCCCce----eEeeccCCCccEEEEEEeC-CEEEEEEcCCeEEEeecC---CCCCceeeEeee
Q 046226 101 GNGFIYTGSDSNVIRIWKQPEFT----ECGRLKAKTSMVVAMEVSH-DRVYAAYGDGKIRVWRST---WDNGVKHVKLAT 172 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~-~~l~~~s~dg~i~vwd~~---~~~~~~~~~~~~ 172 (434)
+..++++.+.+|.|+--.+...+ .-..++....-+..+..+. +.++..+..|.+.-.... .....
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~------- 76 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWK------- 76 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTT-------
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCC-------
Confidence 34567888888988865433211 1112333333333333333 488888888886655432 11100
Q ss_pred ccCCCCceeEEEeccccccCcCCCeEEEEEecC---CCEEEEEecCCcEEEEEcCC--------CeeEEEcccCccCeEE
Q 046226 173 IPKTGGAVRNLIVGKDKMMKHMGPITSIAINVS---DDTLYSASLDKTIKVWRIRD--------SKCIETIQAHSEPINA 241 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~--------~~~~~~~~~~~~~v~~ 241 (434)
..|..+..+. . ......|..+...++ +.+++.++.+|.++...+.. |.....+... +.+..
T Consensus 77 --a~G~~i~~~i----~-L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~ 148 (323)
T 1wp5_A 77 --DLGQHIANII----P-IDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVD 148 (323)
T ss_dssp --SCCEEGGGTS----C-CCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEE
T ss_pred --CCCcChhhcc----C-CCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEE
Confidence 0010000000 0 123344555433332 66899999999999998742 2222233322 44544
Q ss_pred EEEcC-CCeEEEEeCCCeEEEEecccccC---cceeEEEEEecccccCeEEEEEecCCC-EEEEEcCCCeEEEEEcCccc
Q 046226 242 LVVAD-DGVLYSASDDATVRVWRRYFYSE---NQLHTLILTLTAKYSPVKTLTLTLDDG-LLYGGCTDGYIHYWHKGWFS 316 (434)
Q Consensus 242 ~~~~~-~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~ 316 (434)
+.... +..++..+.+|.+..++...... .........+. ....|.++...+++. .+++.+..|..+..++....
T Consensus 149 ~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~ 227 (323)
T 1wp5_A 149 VHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFE 227 (323)
T ss_dssp EEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred EEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHcc
Confidence 44443 34788888999988887652211 11111112222 234566665544445 78888899998888775421
Q ss_pred ccc-----c-ccCcccCcccceE-EEEee-CCEEEEecCCCcEEEEeccC
Q 046226 317 AQL-----Q-YGGALQGHTHAVM-CLASV-ANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 317 ~~~-----~-~~~~~~~~~~~v~-~~~~~-~~~l~s~~~dg~i~iwd~~~ 358 (434)
... . ....+......+. ++... ++.++..+.+|.+....+..
T Consensus 228 ~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 228 KATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred ccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 111 0 1111212222344 33333 45666677777776666654
No 372
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=63.12 E-value=91 Score=28.45 Aligned_cols=254 Identities=10% Similarity=0.121 Sum_probs=127.7
Q ss_pred ccEEEEEEcCCEEEEEeCCCeEEEecCCCcee----------------------------------EeeccC-------C
Q 046226 93 GQILCIAVGNGFIYTGSDSNVIRIWKQPEFTE----------------------------------CGRLKA-------K 131 (434)
Q Consensus 93 ~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~~~----------------------------------~~~~~~-------~ 131 (434)
..|..++..+...+.-..||.|..|-....-. ...+.. .
T Consensus 67 ~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~ 146 (473)
T 3of7_A 67 AKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAE 146 (473)
T ss_dssp TCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHT
T ss_pred CCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccC
Confidence 46888888666666667889999994322100 011111 1
Q ss_pred CccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEE
Q 046226 132 TSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYS 211 (434)
Q Consensus 132 ~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 211 (434)
...|..|+......++...||.|..|-...... ..+-. ...... .......... -....|..|+.. ....+.
T Consensus 147 ~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~-GqLG~--~~~~~~-~~~~P~~v~~--l~~~~i~~va~G--~~hs~a 218 (473)
T 3of7_A 147 GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE-GILGF--YQDKIK-IQKTPWKVPT--FSKYNIVQLAPG--KDHILF 218 (473)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEECEEETT-EEEES--BTTTBS-CEEEEEECCC--CCSSCEEEEEEC--SSEEEE
T ss_pred CCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCC-CccCC--CCCCCc-cccCcEEccc--cCCCCEEEEEec--CCeEEE
Confidence 356888888777777788999999996421000 00000 000000 0000000000 012246666653 456666
Q ss_pred EecCCcEEEEEcCCCeeEEE----------c---ccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCc--------
Q 046226 212 ASLDKTIKVWRIRDSKCIET----------I---QAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSEN-------- 270 (434)
Q Consensus 212 ~~~dg~i~vwd~~~~~~~~~----------~---~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------- 270 (434)
-..+|.|+.|-....-.+.. + ......|..|+.... ..++-..+|.|..|=.......
T Consensus 219 lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~-hs~alt~~G~v~~wG~n~~GqlG~~~~~~~ 297 (473)
T 3of7_A 219 LDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGEN-HCFALTKDNKLVSWGLNQFGQCGVSEDVED 297 (473)
T ss_dssp EETTSCEEEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSS-EEEEEETTSCEEEEEECTTSTTCCCSCCCT
T ss_pred EeCCCeEEEEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCC-eEEEEecCCCEEEeCCCCCCCcCCCCcccC
Confidence 67889999996543111000 0 001135666665432 5555667899999954311100
Q ss_pred -ceeEEEEEec-ccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc---------------------ccCcccC
Q 046226 271 -QLHTLILTLT-AKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ---------------------YGGALQG 327 (434)
Q Consensus 271 -~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------------------~~~~~~~ 327 (434)
........+. .....|..++.. ..+.++-..+|.|+.|-......... ....+.+
T Consensus 298 ~~~~~~P~~v~~~~~~~i~~ia~G--~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~ 375 (473)
T 3of7_A 298 GALVTKPKRLALPDNVVIRSIAAG--EHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN 375 (473)
T ss_dssp TCEEEEEEECCCCTTCCEEEEEEC--SSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCS
T ss_pred CceeeccccccccCCccEEEEEeC--CCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCC
Confidence 0111111111 112345555543 34455557788999986432111100 0000111
Q ss_pred cccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 328 HTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 328 ~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
...|..++....+.++-..||.|+.|=...
T Consensus 376 -~~~v~~Ia~G~~hs~al~~~G~vy~wG~n~ 405 (473)
T 3of7_A 376 -VPKFKSVAAGSHHSVAVAQNGIAYSWGFGE 405 (473)
T ss_dssp -SCCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred -CCceEEEEeCCCeEEEEeCCCcEEEeeCCC
Confidence 115666766667777778899999997554
No 373
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=60.92 E-value=91 Score=27.74 Aligned_cols=249 Identities=12% Similarity=0.072 Sum_probs=129.5
Q ss_pred cccEEEEEEcCCEEEEEeCCCeEEEecCCCc-e------------eEeeccCCCccEEEEEEeCCEEEEEEcCCeEEEee
Q 046226 92 DGQILCIAVGNGFIYTGSDSNVIRIWKQPEF-T------------ECGRLKAKTSMVVAMEVSHDRVYAAYGDGKIRVWR 158 (434)
Q Consensus 92 ~~~v~~~~~~~~~l~tg~~dg~i~iwd~~~~-~------------~~~~~~~~~~~v~~l~~~~~~l~~~s~dg~i~vwd 158 (434)
...|..++......+.-..||.|..|-.... + ....+. -...|..|+...+..++...||.|..|-
T Consensus 58 ~~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-l~~~i~~va~G~~hs~alt~~G~v~~wG 136 (413)
T 1a12_A 58 PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWG 136 (413)
T ss_dssp SSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECC-CCSCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEec-CCCcEEEEecCCCeEEEEcCCCcEEEee
Confidence 3568888886666666778999999954321 0 011111 1346788887777777888999999996
Q ss_pred c--CCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEcCCCeeE-------
Q 046226 159 S--TWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRIRDSKCI------- 229 (434)
Q Consensus 159 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~------- 229 (434)
. .....+. .. ....... .. . .+ .....|..|+.. ..+.+.-..||.|+.|-....-.+
T Consensus 137 ~~~n~~GqlG---~~---~~~~~~~-~P--~-~v-~~~~~i~~ia~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 203 (413)
T 1a12_A 137 SFRDNNGVIG---LL---EPMKKSM-VP--V-QV-QLDVPVVKVASG--NDHLVMLTADGDLYTLGCGEQGQLGRVPELF 203 (413)
T ss_dssp CEEETTEEEE---SS---BBTBCEE-EE--E-EE-CCSSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCGGGT
T ss_pred CCcCCCCccC---cC---Ccccccc-CC--E-Ee-cCCCCEEEEEec--CceEEEEcCCCCEEEeeCCCCCccCCCcccc
Confidence 4 2111100 00 0000000 00 0 00 123456666653 445566667899999965431100
Q ss_pred ---------------EEccc------CccCeEEEEEcCCCeEEEEeCCCeEEEEecccccC-----cceeEEEEEecccc
Q 046226 230 ---------------ETIQA------HSEPINALVVADDGVLYSASDDATVRVWRRYFYSE-----NQLHTLILTLTAKY 283 (434)
Q Consensus 230 ---------------~~~~~------~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~ 283 (434)
..... ....|..|+.... ..++-..+|.|..|=...... .........+....
T Consensus 204 ~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~-hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~ 282 (413)
T 1a12_A 204 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY-FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK 282 (413)
T ss_dssp SSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETT-EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGC
T ss_pred ccccccccccccccCceEeeccccccCCccEEEEEeCCC-EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhcc
Confidence 00110 2235666666544 444455889999995432110 00111111121111
Q ss_pred ---cCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc--------cccCcccCcccceEEEEeeCCEEEEecCCCcEE
Q 046226 284 ---SPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL--------QYGGALQGHTHAVMCLASVANYVISGSADSTSR 352 (434)
Q Consensus 284 ---~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~ 352 (434)
..|..++. ...+.++-..||.|+.|-........ .....+.. ...|..++....+.++-..||.|+
T Consensus 283 ~~~~~v~~ia~--G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs~alt~~G~v~ 359 (413)
T 1a12_A 283 NSTKSWVGFSG--GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVGYAVTKDGRVF 359 (413)
T ss_dssp CTTCCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEEEEEETTSCEE
T ss_pred CCCceEEEEec--ccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceEEEEeCCCCEE
Confidence 23555544 33455556678999999643211100 00000111 125777777777777778899999
Q ss_pred EEeccC
Q 046226 353 VWAREQ 358 (434)
Q Consensus 353 iwd~~~ 358 (434)
.|=...
T Consensus 360 ~wG~n~ 365 (413)
T 1a12_A 360 AWGMGT 365 (413)
T ss_dssp EEECCT
T ss_pred EecCCC
Confidence 997554
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=56.03 E-value=98 Score=26.61 Aligned_cols=209 Identities=10% Similarity=0.067 Sum_probs=114.4
Q ss_pred cCCCeEEEEEecCCCEEEEEecCCcEEEEEc---CC------CeeEEEcc--cCccCeEEEEEcC---CC-eEEEEeCCC
Q 046226 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRI---RD------SKCIETIQ--AHSEPINALVVAD---DG-VLYSASDDA 257 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~---~~------~~~~~~~~--~~~~~v~~~~~~~---~~-~l~s~~~dg 257 (434)
..+.+..+........|+.-+..|.++-... .. |..+..+- .....|..+...+ +. .++..+.+|
T Consensus 40 e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 40 QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 3445666655566677777777887665543 22 22221111 1234565554433 23 899999999
Q ss_pred eEEEEecccccCcce-eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcC--ccccc-----ccccCcccCcc
Q 046226 258 TVRVWRRYFYSENQL-HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKG--WFSAQ-----LQYGGALQGHT 329 (434)
Q Consensus 258 ~i~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~-----~~~~~~~~~~~ 329 (434)
.++...+........ ......+.. ...+..+........|+..+..|.+..+... .-... ......+.. .
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~ 197 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-D 197 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-T
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-C
Confidence 999998774433221 112222333 3455555555566778888899999888765 21111 111112222 2
Q ss_pred cceEEEEe-e-CCEEEEecCCCcEEEEeccCCC------ceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 330 HAVMCLAS-V-ANYVISGSADSTSRVWAREQDG------RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 330 ~~v~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
..|.++.. . +.+++..+..|.++.-.+..-. .......+..-.+.+..+....+ ...++..+.
T Consensus 198 d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~---------~~~i~l~T~ 268 (327)
T 3uc1_A 198 DRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDD---------DSELYAVTS 268 (327)
T ss_dssp CCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECT---------TCEEEEEEG
T ss_pred CEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCC---------CccEEEEcC
Confidence 34555544 3 4589999999999888765421 11111122221334444443333 345666677
Q ss_pred CCeEEEEecCC
Q 046226 402 DGVLKMWRVTR 412 (434)
Q Consensus 402 Dg~v~iw~~~~ 412 (434)
+|.+.-++...
T Consensus 269 ~G~~ir~~~~~ 279 (327)
T 3uc1_A 269 GGGVIRTAARQ 279 (327)
T ss_dssp GGCEEEEEGGG
T ss_pred CCeEEEEehhh
Confidence 88877777653
No 375
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=55.30 E-value=1.2e+02 Score=27.54 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=23.3
Q ss_pred cCeEEEEEecCCC-EEEEEcCCCeEEEEEcC
Q 046226 284 SPVKTLTLTLDDG-LLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 284 ~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~ 313 (434)
.....|+|.|++. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 4567899999986 56666778999999753
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.38 E-value=35 Score=35.44 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=21.3
Q ss_pred ccEEEEeecCCeEEEEecCCCCcc
Q 046226 393 YCTICTGSLDGVLKMWRVTRPKSS 416 (434)
Q Consensus 393 ~~~l~s~~~Dg~v~iw~~~~~~~~ 416 (434)
..++++-+.|+++|||++.+++.+
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTEEE
T ss_pred ccEEEEEeCCCEEEEEECCCCCeE
Confidence 679999999999999999988643
No 377
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=52.25 E-value=1.4e+02 Score=27.20 Aligned_cols=219 Identities=11% Similarity=0.083 Sum_probs=106.9
Q ss_pred CccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEee------eccC------CCCceeEEEeccccccC-------
Q 046226 132 TSMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLA------TIPK------TGGAVRNLIVGKDKMMK------- 192 (434)
Q Consensus 132 ~~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~~------- 192 (434)
...|..|+.-....++...||.|..|-......+..-... .... .................
T Consensus 66 ~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~ 145 (473)
T 3of7_A 66 EAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 145 (473)
T ss_dssp TTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHH
T ss_pred CCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCccc
Confidence 3468888888777777889999999965443222110000 0000 00000000000000000
Q ss_pred cCCCeEEEEEecCCCEEEEEecCCcEEEEEcC---CCee------------EEEccc-CccCeEEEEEcCCCeEEEEeCC
Q 046226 193 HMGPITSIAINVSDDTLYSASLDKTIKVWRIR---DSKC------------IETIQA-HSEPINALVVADDGVLYSASDD 256 (434)
Q Consensus 193 ~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~---~~~~------------~~~~~~-~~~~v~~~~~~~~~~l~s~~~d 256 (434)
....|..|+.. ....+.-..||.|+.|-.. .++. ...+.. ....|..|+...+ ..++-..+
T Consensus 146 ~~~~i~~va~G--~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~-hs~alt~~ 222 (473)
T 3of7_A 146 EGHKVVQLAAT--DNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKD-HILFLDEE 222 (473)
T ss_dssp TTCCEEEEEEC--SSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSS-EEEEEETT
T ss_pred CCCcEEEEEcc--CCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCC-eEEEEeCC
Confidence 12456666653 4555666778999999751 1111 011111 1224666765433 55566788
Q ss_pred CeEEEEecccccCcc----------eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc-------
Q 046226 257 ATVRVWRRYFYSENQ----------LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL------- 319 (434)
Q Consensus 257 g~i~iwd~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------- 319 (434)
|.|..|-........ ...+. .. ....|..++. ...+.++-..+|.|+.|-........
T Consensus 223 G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~-~~--~~~~v~~Ia~--G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~ 297 (473)
T 3of7_A 223 GMVFAWGNGQQNQLGRKVMERFRLKTLDPR-PF--GLRHVKYIAS--GENHCFALTKDNKLVSWGLNQFGQCGVSEDVED 297 (473)
T ss_dssp SCEEEEECCTTSTTSSCCCGGGTTTTCSCE-EC--SCCSEEEEEE--CSSEEEEEETTSCEEEEEECTTSTTCCCSCCCT
T ss_pred CeEEEEeCCCCCCCCCCccccccccccCce-ec--CCcceEEEec--CCCeEEEEecCCCEEEeCCCCCCCcCCCCcccC
Confidence 999999543111000 00000 00 1134555544 34555666678999999643221100
Q ss_pred -----cccCcccCcccceEEEEeeCCEEEEecCCCcEEEEeccC
Q 046226 320 -----QYGGALQGHTHAVMCLASVANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 320 -----~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~ 358 (434)
............|..++....+.++-..||.|+.|-...
T Consensus 298 ~~~~~~P~~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~ 341 (473)
T 3of7_A 298 GALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLD 341 (473)
T ss_dssp TCEEEEEEECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECT
T ss_pred CceeeccccccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCC
Confidence 000000011235667777667777778899999997543
No 378
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=46.03 E-value=1.4e+02 Score=25.41 Aligned_cols=198 Identities=10% Similarity=0.067 Sum_probs=109.8
Q ss_pred EEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEEc
Q 046226 144 RVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWRI 223 (434)
Q Consensus 144 ~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~ 223 (434)
.+++.+.+|.|+--.+..-..... .+..+..+. ..-.+.+..+........++..+..|.++-...
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~--------~~~g~~~~~------lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~ 75 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGT--------GGKGLSSFD------LNDGDEIVIALCVNTHDYLFMISNEGKLYLINA 75 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCS--------SCCCEECCC------CCTTCCEEEEEEEETTCEEEEEETTSEEEEEEG
T ss_pred EEEEEeCCCEEEEeEHHHhhcccc--------CCCCceecc------cCCCCEEEEEEEECCCCEEEEEECCCeEEEEEH
Confidence 678889999998776543211110 000000000 013344555555556677888888998777765
Q ss_pred CCC---------ee---EEEcccCccCeEEEEEcC----CCeEEEEeCCCeEEEEecccccCcc-eeEEEEEecccccCe
Q 046226 224 RDS---------KC---IETIQAHSEPINALVVAD----DGVLYSASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSPV 286 (434)
Q Consensus 224 ~~~---------~~---~~~~~~~~~~v~~~~~~~----~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~v 286 (434)
..- .. ...+. ....|..+...+ +..++..+.+|.++...+....... .......+.. ...+
T Consensus 76 ~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~l 153 (312)
T 1suu_A 76 YEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFV 153 (312)
T ss_dssp GGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCE
T ss_pred HHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEE
Confidence 321 11 11122 233455554332 3378888999999999886443322 1122222333 4556
Q ss_pred EEEEEecCCCEEEEEcCCCeEEEEEcCccccc-----ccccCcccCcccceEEEEe--eCCEEEEecCCCcEEEEeccC
Q 046226 287 KTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ-----LQYGGALQGHTHAVMCLAS--VANYVISGSADSTSRVWAREQ 358 (434)
Q Consensus 287 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~iwd~~~ 358 (434)
..+....++..++..+.+|.+..+........ ......+.. ...|..+.. .+..+++.+..|..+..++..
T Consensus 154 v~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 154 TSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 66655555677888999999999987532111 111112222 234555543 355788889999999888754
No 379
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=42.85 E-value=1.5e+02 Score=24.98 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=71.8
Q ss_pred EEecCCCEEEEEe----cCCcEEEEEcCCCeeEEEcccCccCeEEEEEcCCC-eEE-EEeCCCeEEEEecccccCcceeE
Q 046226 201 AINVSDDTLYSAS----LDKTIKVWRIRDSKCIETIQAHSEPINALVVADDG-VLY-SASDDATVRVWRRYFYSENQLHT 274 (434)
Q Consensus 201 ~~~~~~~~l~s~~----~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~dg~i~iwd~~~~~~~~~~~ 274 (434)
.|++++++|+-.. .+..|+..++.... ...+..+.. ..+++++ .|+ +......|.+-++. +.. .+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~---g~~-~~ 180 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTA---SQS-EA 180 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETT---TTE-EE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECC---CCC-EE
Confidence 5677888888665 34567777776433 333433322 2345555 444 44445677777765 211 22
Q ss_pred EEEEecccccCeEEEEEecCCCEEEEEcCC--CeEEEEEcCcccccccccCcccCcccceEEEEeeCCEEEEec--CCCc
Q 046226 275 LILTLTAKYSPVKTLTLTLDDGLLYGGCTD--GYIHYWHKGWFSAQLQYGGALQGHTHAVMCLASVANYVISGS--ADST 350 (434)
Q Consensus 275 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~--~dg~ 350 (434)
.+ .. .... ..+.|++.+|+-...+ ..|..-++..... .. +. ...+..+++.+++|+-+. ..+.
T Consensus 181 ~l--~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~--~~---Lt--~~~~~~~~~~g~~Iy~~~~~~~~~ 247 (302)
T 3s25_A 181 LF--YD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP--VV---LT--EANIEHYNVYGSLIFYQRGGDNPA 247 (302)
T ss_dssp EE--EC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC--EE---CS--CSCEEEEEEETTEEEEEECSSSCE
T ss_pred EE--eC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe--EE---Ee--CCCcceEEECCCEEEEEECCCCcE
Confidence 22 11 1222 3456888887765443 3555555543322 11 11 123456888898777653 2356
Q ss_pred EEEEeccCC
Q 046226 351 SRVWAREQD 359 (434)
Q Consensus 351 i~iwd~~~~ 359 (434)
|..-++...
T Consensus 248 i~~~~~DG~ 256 (302)
T 3s25_A 248 LCVVKNDGT 256 (302)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 666666543
No 380
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=41.48 E-value=89 Score=29.16 Aligned_cols=71 Identities=8% Similarity=0.104 Sum_probs=42.7
Q ss_pred CeEEEEEcCCC---eEEEEeCCCeEEEEecccccCc-ceeEEEEEecccccCeE-EEEEecCCCEEEEEcCCCeEEE
Q 046226 238 PINALVVADDG---VLYSASDDATVRVWRRYFYSEN-QLHTLILTLTAKYSPVK-TLTLTLDDGLLYGGCTDGYIHY 309 (434)
Q Consensus 238 ~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 309 (434)
.+++|+....+ .++.|+.+|.|.-..+...... .... ...+.....+|. .+.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e-~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYE-MVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEE-EEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEE-EEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35556555433 7888999998866554311111 1111 112222245775 8999999999999988776655
No 381
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=39.64 E-value=2e+02 Score=25.44 Aligned_cols=251 Identities=9% Similarity=0.068 Sum_probs=127.8
Q ss_pred ccEEEEEEeCCEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEE
Q 046226 133 SMVVAMEVSHDRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSA 212 (434)
Q Consensus 133 ~~v~~l~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 212 (434)
..|..++......++-..||.|..|-......+..-... .......... .-...|..|+.. ....+.-
T Consensus 59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~---~~~~~~P~~v-------~l~~~i~~va~G--~~hs~al 126 (413)
T 1a12_A 59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSV---EGSEMVPGKV-------ELQEKVVQVSAG--DSHTAAL 126 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCS---TTGGGSCEEC-------CCCSCEEEEEEC--SSEEEEE
T ss_pred CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCC---CccccCCeEe-------cCCCcEEEEecC--CCeEEEE
Confidence 568888877777777788999999975433221110000 0000000000 112356666543 4556666
Q ss_pred ecCCcEEEEEc--CC-Ce------------eEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCcc------
Q 046226 213 SLDKTIKVWRI--RD-SK------------CIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSENQ------ 271 (434)
Q Consensus 213 ~~dg~i~vwd~--~~-~~------------~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------ 271 (434)
..||.|+.|-. .. ++ +... .....|..|+.-.. +.+.-..||.|..|=........
T Consensus 127 t~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v--~~~~~i~~ia~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 203 (413)
T 1a12_A 127 TDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPVVKVASGND-HLVMLTADGDLYTLGCGEQGQLGRVPELF 203 (413)
T ss_dssp ETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSSCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTCSCGGGT
T ss_pred cCCCcEEEeeCCcCCCCccCcCCccccccCCEEe--cCCCCEEEEEecCc-eEEEEcCCCCEEEeeCCCCCccCCCcccc
Confidence 77899999974 21 11 1111 12345666665433 55555688999999543111000
Q ss_pred -----------eeEE-EEEecc----cccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccc----------ccccCcc
Q 046226 272 -----------LHTL-ILTLTA----KYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ----------LQYGGAL 325 (434)
Q Consensus 272 -----------~~~~-~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~ 325 (434)
...+ ...+.. ....|..++... .+.++-..+|.|+.|-....... ......+
T Consensus 204 ~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~--~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l 281 (413)
T 1a12_A 204 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA--YFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF 281 (413)
T ss_dssp SSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEET--TEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGG
T ss_pred ccccccccccccccCceEeeccccccCCccEEEEEeCC--CEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhc
Confidence 0000 001100 223455665543 34455567899999965422110 0011112
Q ss_pred cCcccceEEEEeeCCEEEEecCCCcEEEEeccCCC---------ceeeEEEeeccccceeEEEEeecccCCCCCCcccEE
Q 046226 326 QGHTHAVMCLASVANYVISGSADSTSRVWAREQDG---------RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTI 396 (434)
Q Consensus 326 ~~~~~~v~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l 396 (434)
......|..++....+.++-..||.|+.|-....+ .......+.. -..|..++.- ....
T Consensus 282 ~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G-----------~~hs 349 (413)
T 1a12_A 282 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACG-----------ASVG 349 (413)
T ss_dssp CCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEEC-----------SSEE
T ss_pred cCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEEC-----------cceE
Confidence 12123477777767777777889999999654311 0011111111 2256666554 3355
Q ss_pred EEeecCCeEEEEecCC
Q 046226 397 CTGSLDGVLKMWRVTR 412 (434)
Q Consensus 397 ~s~~~Dg~v~iw~~~~ 412 (434)
+.-..||.|+.|-...
T Consensus 350 ~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 350 YAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEETTSCEEEEECCT
T ss_pred EEEeCCCCEEEecCCC
Confidence 5566899999997654
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=37.91 E-value=1.7e+02 Score=24.03 Aligned_cols=150 Identities=11% Similarity=-0.028 Sum_probs=78.1
Q ss_pred EEEEEecCCcEEEEEcCCCe-eEEEcccCccCeEEEEEcCCCeEEEEeCCCeEEEEecccccCc-ceeEEE---EEeccc
Q 046226 208 TLYSASLDKTIKVWRIRDSK-CIETIQAHSEPINALVVADDGVLYSASDDATVRVWRRYFYSEN-QLHTLI---LTLTAK 282 (434)
Q Consensus 208 ~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~---~~~~~~ 282 (434)
..++.+.+|.|+--...... ....++....-+..+.......++..+..|.+.-+........ .....+ ..+. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-P 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-T
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-C
Confidence 45566677777765543311 0112333333333333344446777788888777665422111 111111 1111 2
Q ss_pred ccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccc---ccccCcccCcccceEEEEe-e-CCEEEEecCCCcEEEEecc
Q 046226 283 YSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQ---LQYGGALQGHTHAVMCLAS-V-ANYVISGSADSTSRVWARE 357 (434)
Q Consensus 283 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~~~~v~~~~~-~-~~~l~s~~~dg~i~iwd~~ 357 (434)
...|..+....++.+|+.++..|.++...+...... ......+.....-+..... + ++.++..+.+|.+..++..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 335666544345677888999999999987543211 1111122222222222333 2 4578888899999888875
Q ss_pred C
Q 046226 358 Q 358 (434)
Q Consensus 358 ~ 358 (434)
.
T Consensus 163 e 163 (256)
T 1zvt_A 163 D 163 (256)
T ss_dssp G
T ss_pred H
Confidence 4
No 383
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=36.93 E-value=2.2e+02 Score=25.00 Aligned_cols=240 Identities=11% Similarity=0.051 Sum_probs=119.8
Q ss_pred cCCEEEEEeCCCeEEEecCCC---------ceeEeeccCCCccEEEEEEeC--CEEEEEEcCCeEEEeecC---CCCCce
Q 046226 101 GNGFIYTGSDSNVIRIWKQPE---------FTECGRLKAKTSMVVAMEVSH--DRVYAAYGDGKIRVWRST---WDNGVK 166 (434)
Q Consensus 101 ~~~~l~tg~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~l~~~~--~~l~~~s~dg~i~vwd~~---~~~~~~ 166 (434)
+..++++.+.+|.|+--.+.+ +..-..++. ...+..+.... +.++..+..|.+.-+... .....
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~- 83 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN- 83 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT-
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc-
Confidence 567888999999998754321 122223333 33444444333 367777788876655432 11000
Q ss_pred eeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEec---CCCEEEEEecCCcEEEEEcCCC-------eeEEEcccCc
Q 046226 167 HVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINV---SDDTLYSASLDKTIKVWRIRDS-------KCIETIQAHS 236 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~ 236 (434)
..|..+..+. . ......|.++.... ++.+|+.++..|.++...+... .....+.. .
T Consensus 84 --------a~G~~i~~ll----~-L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~ 149 (370)
T 3l6v_A 84 --------ARGRPIINWI----P-LESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-G 149 (370)
T ss_dssp --------SCCEEGGGSC----C-CCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-T
T ss_pred --------cCCcCHhhcc----C-CCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-C
Confidence 0010000000 0 12334555554432 4568999999999999887532 22223333 3
Q ss_pred cCeEEEEEcC-CCeEEEEeCCCeEEEEeccccc---CcceeEEEEEecccccCeEEEEEec-------------------
Q 046226 237 EPINALVVAD-DGVLYSASDDATVRVWRRYFYS---ENQLHTLILTLTAKYSPVKTLTLTL------------------- 293 (434)
Q Consensus 237 ~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~------------------- 293 (434)
+.+..+.... +..++..+.+|.+..++..... ..........+. ....|.++...+
T Consensus 150 d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (370)
T 3l6v_A 150 DALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVE 228 (370)
T ss_dssp CCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------
T ss_pred CEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccc
Confidence 3444444443 3378888888988888754211 111111111111 123444444333
Q ss_pred ----------------CCCEEEEEcCCCeEEEEEcCccccccc-----ccCcccCcccceEEEEe-e-CCEEEEecCCCc
Q 046226 294 ----------------DDGLLYGGCTDGYIHYWHKGWFSAQLQ-----YGGALQGHTHAVMCLAS-V-ANYVISGSADST 350 (434)
Q Consensus 294 ----------------~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~v~~~~~-~-~~~l~s~~~dg~ 350 (434)
++..+++.+..|..+...+........ ....+....+.+..+.+ . .+.++..+..|.
T Consensus 229 t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~ 308 (370)
T 3l6v_A 229 TTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGT 308 (370)
T ss_dssp ------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCC
T ss_pred ccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCe
Confidence 456889999999999888754332211 11122222234444322 2 345555566666
Q ss_pred EEEEecc
Q 046226 351 SRVWARE 357 (434)
Q Consensus 351 i~iwd~~ 357 (434)
+.-..+.
T Consensus 309 ~iR~~v~ 315 (370)
T 3l6v_A 309 LVRTRGS 315 (370)
T ss_dssp EEEEEGG
T ss_pred EEEeeHh
Confidence 6555544
No 384
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=36.52 E-value=1.1e+02 Score=21.31 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=27.5
Q ss_pred CCEEEEEecCCcEEEEEcCCCeeEEEcccCc-cCeEEEEEcCCCeEEEEeCCCeEEEEe
Q 046226 206 DDTLYSASLDKTIKVWRIRDSKCIETIQAHS-EPINALVVADDGVLYSASDDATVRVWR 263 (434)
Q Consensus 206 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~s~~~dg~i~iwd 263 (434)
+.+.+.-..||.+.+|+...+..+..-.... ..-..+.+..+|.|+.-..++.+ +|.
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~ 81 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFV 81 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEE
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEE
Confidence 5555555666777776653344444332221 12234566666633333344443 564
No 385
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.51 E-value=1.5e+02 Score=28.14 Aligned_cols=53 Identities=4% Similarity=-0.008 Sum_probs=36.0
Q ss_pred CeEEEEEecCCCEEEEEecC------------CcEEEEEcCCCeeEEEcccC-ccCeEEEEEcCCC
Q 046226 196 PITSIAINVSDDTLYSASLD------------KTIKVWRIRDSKCIETIQAH-SEPINALVVADDG 248 (434)
Q Consensus 196 ~v~~~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~ 248 (434)
..-.|+|++.|++++.-..+ ..+.+.+..+++..+.+..+ ...++.++|+||+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg 542 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQ 542 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCC
Confidence 44678999999866654322 24556666677766555554 4578899999987
No 386
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=31.60 E-value=2.4e+02 Score=23.87 Aligned_cols=206 Identities=14% Similarity=0.132 Sum_probs=112.6
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcC---C------CeeEE---EcccCccCeEEEEEc---CCC-eEEEEeCCCe
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIR---D------SKCIE---TIQAHSEPINALVVA---DDG-VLYSASDDAT 258 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~---~------~~~~~---~~~~~~~~v~~~~~~---~~~-~l~s~~~dg~ 258 (434)
+.+..+........|+..+..|.++-.... . |..+. .+. ....|..+... .++ .++..+.+|.
T Consensus 42 D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 120 (307)
T 1zi0_A 42 DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGT 120 (307)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCe
Confidence 445555555566778878888887666542 1 22221 122 33456555442 233 7899999999
Q ss_pred EEEEecccccCcce-eEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCccccccc-----ccCcccCcccce
Q 046226 259 VRVWRRYFYSENQL-HTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQLQ-----YGGALQGHTHAV 332 (434)
Q Consensus 259 i~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~v 332 (434)
++-..+........ ......+... +.+..+....+...++..+.+|.+..++...-..... ..-.+. ....|
T Consensus 121 ~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~V 198 (307)
T 1zi0_A 121 VKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKV 198 (307)
T ss_dssp EEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCE
T ss_pred EEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEE
Confidence 99998764332221 1122223333 4555555555556788888899998888643211111 111222 22355
Q ss_pred EEEEe--eCCEEEEecCCCcEEEEeccCCC------ceeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeecCCe
Q 046226 333 MCLAS--VANYVISGSADSTSRVWAREQDG------RHTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSLDGV 404 (434)
Q Consensus 333 ~~~~~--~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~Dg~ 404 (434)
.++.. ++..+++.+..|.++-.++..-. .......+....+.+..+....+ ...|+..+.+|.
T Consensus 199 v~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~---------~~~l~~~t~~g~ 269 (307)
T 1zi0_A 199 VSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDD---------CDQIMMITDAGT 269 (307)
T ss_dssp EEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECT---------TCEEEEEESSCC
T ss_pred EEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCC---------CceEEEEcCCCc
Confidence 55543 24578888999999888774321 11112223333355554444333 344666667787
Q ss_pred EEEEecCC
Q 046226 405 LKMWRVTR 412 (434)
Q Consensus 405 v~iw~~~~ 412 (434)
+.-.++..
T Consensus 270 ~ir~~~~~ 277 (307)
T 1zi0_A 270 LVRTRVSE 277 (307)
T ss_dssp EEEEEGGG
T ss_pred EEEEeccc
Confidence 77777654
No 387
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.13 E-value=2.5e+02 Score=25.85 Aligned_cols=72 Identities=22% Similarity=0.281 Sum_probs=42.4
Q ss_pred CeEEEEEcC----CC---eEEEEeCCCeEEEEecccccCc-c-eeEEEEEec--ccccCeEEEEEecCCCEEEEEcCCCe
Q 046226 238 PINALVVAD----DG---VLYSASDDATVRVWRRYFYSEN-Q-LHTLILTLT--AKYSPVKTLTLTLDDGLLYGGCTDGY 306 (434)
Q Consensus 238 ~v~~~~~~~----~~---~l~s~~~dg~i~iwd~~~~~~~-~-~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~ 306 (434)
..++|+... ++ .++.|+.+|.|.=.-+...... . ....+..+. ....+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356766652 24 6888899998754432210000 0 001111122 23468899999999999999998886
Q ss_pred EEE
Q 046226 307 IHY 309 (434)
Q Consensus 307 i~i 309 (434)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 388
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=30.56 E-value=2.2e+02 Score=23.27 Aligned_cols=117 Identities=11% Similarity=0.055 Sum_probs=67.1
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEEcCC-------CeeEE---EcccCccCeEEEEEcCCC-eEEEEeCCCeEEEEe
Q 046226 195 GPITSIAINVSDDTLYSASLDKTIKVWRIRD-------SKCIE---TIQAHSEPINALVVADDG-VLYSASDDATVRVWR 263 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-------~~~~~---~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd 263 (434)
+.+..+........|+..+..|.++-..+.. |..+. .+. ....|.++....++ .++.++..|.++...
T Consensus 33 D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~ 111 (256)
T 1zvt_A 33 DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-PGATVDHMLMESDDQKLLMASDAGYGFVCT 111 (256)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeE
Confidence 3444444444555677777788876665422 22111 122 23456666443334 788899999999998
Q ss_pred cccccCc-ceeEEEEEecccccCeEEEEEe-cCCCEEEEEcCCCeEEEEEcC
Q 046226 264 RYFYSEN-QLHTLILTLTAKYSPVKTLTLT-LDDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 264 ~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~ 313 (434)
+...... ........+.. ...+..+... .++..++..+.+|.+..|++.
T Consensus 112 ~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 112 FNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp GGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred HHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 8643321 22222333332 2344444444 345678888999999999874
No 389
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.23 E-value=2.4e+02 Score=26.57 Aligned_cols=58 Identities=3% Similarity=0.027 Sum_probs=39.4
Q ss_pred CCeEEEEEecCCCEEEEEec------------CCcEEEEEcCCCeeEEEcccC-ccCeEEEEEcCCC-eEEE
Q 046226 195 GPITSIAINVSDDTLYSASL------------DKTIKVWRIRDSKCIETIQAH-SEPINALVVADDG-VLYS 252 (434)
Q Consensus 195 ~~v~~~~~~~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~-~l~s 252 (434)
.....|.|.++|.+.+.... .+.|..++..+++....+... ...++.++|+||+ .|+.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 45678999999987774321 125777777777765555443 3568999999998 4433
No 390
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.04 E-value=2.6e+02 Score=23.87 Aligned_cols=208 Identities=13% Similarity=0.087 Sum_probs=111.4
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEEcCC---------CeeEEEc-c-cCccCeEEEEEcCC---C-eEEEEeCCCe
Q 046226 194 MGPITSIAINVSDDTLYSASLDKTIKVWRIRD---------SKCIETI-Q-AHSEPINALVVADD---G-VLYSASDDAT 258 (434)
Q Consensus 194 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~-~-~~~~~v~~~~~~~~---~-~l~s~~~dg~ 258 (434)
.+.+..+........|+..+..|.++-..... |.++..+ . .....|..+...++ + .++.++.+|.
T Consensus 38 ~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 38 TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 34455555555677788888888876665521 2222111 1 12344555433332 3 7889999999
Q ss_pred EEEEecccccCcc--eeEEEEEecccccCeEEEEEecCCCEEEEEcCCCeEEEEEcCcccccc-----cccCcccCcccc
Q 046226 259 VRVWRRYFYSENQ--LHTLILTLTAKYSPVKTLTLTLDDGLLYGGCTDGYIHYWHKGWFSAQL-----QYGGALQGHTHA 331 (434)
Q Consensus 259 i~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~ 331 (434)
++...+....... .......+... +.+..+........++..+.+|.+..+....-.... .....+.. ...
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~ 195 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDY 195 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCC
T ss_pred EEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCE
Confidence 9999886443322 12222223322 455555555556678888899999988864321111 11112222 234
Q ss_pred eEEEEe-e-CC-EEEEecCCCcEEEEeccCC------Cc-eeeEEEeeccccceeEEEEeecccCCCCCCcccEEEEeec
Q 046226 332 VMCLAS-V-AN-YVISGSADSTSRVWAREQD------GR-HTMLAVLVGHRGPIRCAIAFLGRFGEETEDEYCTICTGSL 401 (434)
Q Consensus 332 v~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~------~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~l~s~~~ 401 (434)
|.++.. . +. .+++.+..|..+..++..- +. ...+..++.....+..+....+ +..++..+.
T Consensus 196 Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~---------~~~i~~it~ 266 (323)
T 1wp5_A 196 IVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQD---------SDTIYLQTE 266 (323)
T ss_dssp EEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECT---------TCEEEEEET
T ss_pred EEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCC---------CCeEEEEeC
Confidence 555533 2 34 7888888998888777541 01 1111122222224543333222 344666677
Q ss_pred CCeEEEEecCC
Q 046226 402 DGVLKMWRVTR 412 (434)
Q Consensus 402 Dg~v~iw~~~~ 412 (434)
.|.+....+..
T Consensus 267 ~g~~ir~~~~~ 277 (323)
T 1wp5_A 267 KSFIETIKVGD 277 (323)
T ss_dssp TSCEEEEEGGG
T ss_pred CCeEEEEEhhh
Confidence 78776667654
No 391
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=25.49 E-value=4.9e+02 Score=25.57 Aligned_cols=112 Identities=14% Similarity=0.099 Sum_probs=59.7
Q ss_pred cCCCeEEEEEecC-CCEEEEEecCCcEEEEEcCCCeeEEEcccC-------ccCeEEEEEcCCC--eEEEEeCCCe----
Q 046226 193 HMGPITSIAINVS-DDTLYSASLDKTIKVWRIRDSKCIETIQAH-------SEPINALVVADDG--VLYSASDDAT---- 258 (434)
Q Consensus 193 ~~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~--~l~s~~~dg~---- 258 (434)
....|.+|+++|. ...+++++..+.|...+ +.++.-..+..+ ...+.+|++.|.. .++.+..+..
T Consensus 13 ~~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 13 GGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 3468999999986 45677777777776665 334433333321 2469999998854 4444432211
Q ss_pred EEEEecccccCcceeEEEEEecc------cccCeEEEEEecC-CCEEEEEcCCCeE
Q 046226 259 VRVWRRYFYSENQLHTLILTLTA------KYSPVKTLTLTLD-DGLLYGGCTDGYI 307 (434)
Q Consensus 259 i~iwd~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l~~~~~dg~i 307 (434)
-.||.-. .............. ....+..++++|. .+.++.+...+.|
T Consensus 92 ~~v~~S~--DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl 145 (789)
T 1sqj_A 92 AAFYVSE--DRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI 145 (789)
T ss_dssp CEEEEES--STTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE
T ss_pred cEEEEEC--CCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE
Confidence 2334322 23334444322100 0113556888874 3566666644443
No 392
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=23.38 E-value=5.2e+02 Score=25.10 Aligned_cols=165 Identities=10% Similarity=-0.018 Sum_probs=0.0
Q ss_pred cCeEEEEEcCCC--eEEEEeCCCeEEEEecccccCcceeEEEEEecc----cccCeEEEEEec-CCCEEEEEcCCCe---
Q 046226 237 EPINALVVADDG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTA----KYSPVKTLTLTL-DDGLLYGGCTDGY--- 306 (434)
Q Consensus 237 ~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~dg~--- 306 (434)
+.|..|+++|.. .++++...+.|...+ ........+..... ....+.+|+++| +.+.++++.....
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~----D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~ 98 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD----PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDW 98 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE----TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSS
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC----CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccc
Q ss_pred ----EEEEEcCcccccccccCcccCccc------ceEEEEee---CCEEEEecCCCcEEEEeccCCCceeeEEEeecc--
Q 046226 307 ----IHYWHKGWFSAQLQYGGALQGHTH------AVMCLASV---ANYVISGSADSTSRVWAREQDGRHTMLAVLVGH-- 371 (434)
Q Consensus 307 ----i~i~d~~~~~~~~~~~~~~~~~~~------~v~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-- 371 (434)
..||.-.......+.......-.. .+..++++ ++.++.+...|.-.....+.+..++.+..+..+
T Consensus 99 ~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~~~~ 178 (737)
T 2cn3_A 99 LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNPGT 178 (737)
T ss_dssp SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCCCCC
T ss_pred ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCCCcc
Q ss_pred ------------ccceeEEEEeecccCCCCCCccc------EEEEeecCCeEEEEecCCC
Q 046226 372 ------------RGPIRCAIAFLGRFGEETEDEYC------TICTGSLDGVLKMWRVTRP 413 (434)
Q Consensus 372 ------------~~~v~~~~~~~~~~~~~~~~~~~------~l~s~~~Dg~v~iw~~~~~ 413 (434)
...+..+.+.|.. .. .|..+..|+.-.||.-..+
T Consensus 179 ~~~~p~~~~~~~~~g~~~v~~dp~~--------~~~~~~~~~v~~~~~~~~~~v~~S~Dg 230 (737)
T 2cn3_A 179 YIYDPNFDYTKDIIGVVWVVFDKSS--------STPGNPTKTIYVGVADKNESIYRSTDG 230 (737)
T ss_dssp CBSCTTSTTTCSBCCEEEEEECGGG--------SCTTSCCSCEEEEESCSSCCEEEESST
T ss_pred cccCcccccccCCCCEEEEEcCCCC--------cccCCCCCEEEEEecCCCccEEEEcCC
No 393
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.07 E-value=2.5e+02 Score=27.01 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=24.2
Q ss_pred CcCCCeEEEEEecCCCEEEEEecCCcEEE
Q 046226 192 KHMGPITSIAINVSDDTLYSASLDKTIKV 220 (434)
Q Consensus 192 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~v 220 (434)
....+|..|.++++..+|++++.++.++|
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 46678999999999999999998775554
No 394
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.12 E-value=3.5e+02 Score=25.53 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=33.6
Q ss_pred CeEEEEEcCCCeEEEEeCC-------------CeEEEEecccccCcceeEEEEEecc-cccCeEEEEEecCCCEEEEEc
Q 046226 238 PINALVVADDGVLYSASDD-------------ATVRVWRRYFYSENQLHTLILTLTA-KYSPVKTLTLTLDDGLLYGGC 302 (434)
Q Consensus 238 ~v~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 302 (434)
....|.|.++|.|..+... ..|..++.. ...+...+.. ....++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~------tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA------TGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT------TCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC------CCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567899999944443221 134444432 1112222222 235689999999999888763
No 395
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=21.85 E-value=2.7e+02 Score=25.82 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=41.8
Q ss_pred eEEEEEcC-CC--eEEEEeCCCeEEEEecccccCcceeEEEEEecccccCe-EEEEEecCCCEEEEEcCCCeEEE
Q 046226 239 INALVVAD-DG--VLYSASDDATVRVWRRYFYSENQLHTLILTLTAKYSPV-KTLTLTLDDGLLYGGCTDGYIHY 309 (434)
Q Consensus 239 v~~~~~~~-~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 309 (434)
.+.|++.. ++ .++.|+.+|.|.-.-+...........+ .+ ....+| ..+.++++...|++++.++.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~-~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQ-SI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEE-ES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeee-cc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45555442 33 6778889998864433211111112222 22 344567 48899999999999998887766
No 396
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=20.65 E-value=4.3e+02 Score=23.10 Aligned_cols=155 Identities=14% Similarity=0.099 Sum_probs=86.3
Q ss_pred CEEEEEEcCCeEEEeecCCCCCceeeEeeeccCCCCceeEEEeccccccCcCCCeEEEEEecCCCEEEEEecCCcEEEEE
Q 046226 143 DRVYAAYGDGKIRVWRSTWDNGVKHVKLATIPKTGGAVRNLIVGKDKMMKHMGPITSIAINVSDDTLYSASLDKTIKVWR 222 (434)
Q Consensus 143 ~~l~~~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~vwd 222 (434)
+.+++.+.+|.|+--.+..-...+ ..+..+..+. ......+..+........|+..+..|.++-+.
T Consensus 8 ~~~v~lT~~GyIKr~~l~~y~~~~--------r~g~g~~~~~------lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~ 73 (370)
T 3l6v_A 8 DVVVTLSHAGYAKRQPVSAYRAQR--------RGGRGRSAAS------TKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLP 73 (370)
T ss_dssp CEEEEEESSCEEEEEEHHHHHHTC--------CCCCCSEEEE------CSCCCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEeCCCEEEEeeHHHhhhhc--------cCCCCceecc------cCCCCEEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 378889999999875432100000 0000001111 12455666666666667788788888777665
Q ss_pred cC---------CCeeEEE---cccCccCeEEEEEc----CCCeEEEEeCCCeEEEEecccccCcc-eeEEEEEecccccC
Q 046226 223 IR---------DSKCIET---IQAHSEPINALVVA----DDGVLYSASDDATVRVWRRYFYSENQ-LHTLILTLTAKYSP 285 (434)
Q Consensus 223 ~~---------~~~~~~~---~~~~~~~v~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~ 285 (434)
.. .|..+.. +. ....|.++... ++..|+.++..|.++...+....... .......+.. ...
T Consensus 74 ~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~ 151 (370)
T 3l6v_A 74 VHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDA 151 (370)
T ss_dssp GGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCC
T ss_pred HHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCE
Confidence 42 1222221 22 23456555443 23389999999999999876443321 1112222322 345
Q ss_pred eEEEEEecCCCEEEEEcCCCeEEEEEcC
Q 046226 286 VKTLTLTLDDGLLYGGCTDGYIHYWHKG 313 (434)
Q Consensus 286 v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 313 (434)
+..+........++..+.+|.+..|+..
T Consensus 152 lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 152 LVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 5555555556678888889998888764
No 397
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.36 E-value=3.1e+02 Score=26.41 Aligned_cols=28 Identities=11% Similarity=0.362 Sum_probs=22.0
Q ss_pred cCCCeEEEEEecCC--CEEEEEecCCcEEE
Q 046226 193 HMGPITSIAINVSD--DTLYSASLDKTIKV 220 (434)
Q Consensus 193 ~~~~v~~~~~~~~~--~~l~s~~~dg~i~v 220 (434)
...+|..|.++++. .+|++++.++.++|
T Consensus 448 ~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 448 DFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp TCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred CCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 45688899999887 89999987765554
Done!