BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046228
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
Length = 137
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 24/136 (17%)
Query: 5 SKALALFFTLLIIATSIPSSSA-------------------TSSSSSSCPKNTLKLDACV 45
S ++ALFFTL I+ ++ SS+ S+ CP++ LKL C
Sbjct: 6 SASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALKLGVCA 65
Query: 46 DLLNGLAKVNLGELVPTPNHPCCSLLGDLVRVQARVCLCTSLKLNVLDLIKLNIPKLSVN 105
D+LN + V +G P PCCSLL LV ++A VCLCT++K N+L LN+P ++++
Sbjct: 66 DVLNLVHNVVIGS---PPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLP-IALS 120
Query: 106 LLLNQCRPKVPRGYKC 121
L+LN C +VP G++C
Sbjct: 121 LVLNNCGKQVPNGFEC 136
>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
GN=At4g00165 PE=2 SV=1
Length = 128
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 29 SSSSSCPKNTLKLDACVDLLNGLAKVNLGELVPTPNHPCCSLLGDLVRVQARVCLCTSLK 88
+++ CP++TLK C L GL +G P+ CCSL+ L +A VCLCT+LK
Sbjct: 41 QATTKCPRDTLKFGVCGSWL-GLVSEVIGT---PPSQECCSLIKGLADFEAAVCLCTALK 96
Query: 89 LNVLDLIKLNIPKLSVNLLLNQCRPKVPRGYKC 121
++L + + IP +++ LLLN C VP+G+ C
Sbjct: 97 TSILGVAPVKIP-VALTLLLNSCGKNVPQGFVC 128
>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 27 TSSSSSSCPKNTLKLDACVDLLNGLAKVNLGELVPTPNHPCCSLLGDLVRVQARVCLCTS 86
+S S CP + LKL C +L GL KV L + CC LL LV + A +CLCT+
Sbjct: 41 SSHSHGRCPIDALKLKVCAKVL-GLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTA 94
Query: 87 LKLNVLDLIKLNIPKLSVNLLLNQCRPKVPRGYKC 121
+K NVL I LN+P LS+N +LN C P + C
Sbjct: 95 IKANVLG-IHLNVP-LSLNFILNNCGRICPEDFTC 127
>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
PE=2 SV=1
Length = 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 30 SSSSCPKNTLKLDACVDLLNGLAKVNLGELVPTPNHPCCSLLGDLVRVQARVCLCTSLKL 89
+ +CP + LKL ACVD+L GL + +G CC LLG LV + A +CLCT+++L
Sbjct: 257 AQPTCPIDALKLGACVDVLGGLIHIGIGGSA---KQTCCPLLGGLVDLDAAICLCTTIRL 313
Query: 90 NVLDLIKLNIPKLSVNLLLNQCRPKVPRGYKC 121
+L+ I + +P +++ +L++ C P+ +KC
Sbjct: 314 KLLN-INIILP-IALQVLIDDCGKYPPKDFKC 343
>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1
Length = 80
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 33 SCPKNTLKLDACVDLLNGLAKVNLGELVPTPNHPCCSLLGDLVRVQARVCLCTSLKLNVL 92
SCP L C+++L G +LG + CC+L+G L ++A VCLC ++L L
Sbjct: 7 SCPD----LSICLNILGG----SLGTV-----DDCCALIGGLGDIEAIVCLC--IQLRAL 51
Query: 93 DLIKLNIPKLSVNLLLNQCRPKVPRGYKC 121
++ LN ++ L+LN C P C
Sbjct: 52 GILNLN---RNLQLILNSCGRSYPSNATC 77
>sp|Q6K1U4|P2C16_ORYSJ Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica
GN=Os02g0598400 PE=2 SV=1
Length = 521
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 19 TSIPSSSATSSSSSSCPKNTLKLDACVDL-LNGLAKVNLGELVPTPN 64
++I S+SA + +S + D+C +G A+ GELVPTP+
Sbjct: 347 SNIASTSAAPAGASDTSDEGVMADSCATADTSGSARAESGELVPTPS 393
>sp|Q9HAS3|S28A3_HUMAN Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1
SV=1
Length = 691
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 31 SSSCPKNTLKLDACV-DLLNGLAKVNLGELVPTPNHP------CCSLL 71
+S+ P NT K+ AC LL+ GE++P NH CC+LL
Sbjct: 630 NSTFPGNTTKVIACCQSLLSSTVAKGPGEVIPGGNHSLYSLKGCCTLL 677
>sp|P48778|GOR_PANTR Exonuclease GOR OS=Pan troglodytes GN=REXO1L1 PE=2 SV=3
Length = 690
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 22 PSSSATSSSSSSC-PKNTLKLDACVDLLNGL-AKVNLGELVPTPNHPC 67
PS++A S SS C P+ K VD G AK N +P P +PC
Sbjct: 586 PSTTAISPESSPCPPRRKAKETGAVDGRRGQKAKSNPNRPLPVPRNPC 633
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,234,795
Number of Sequences: 539616
Number of extensions: 1249760
Number of successful extensions: 6755
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6739
Number of HSP's gapped (non-prelim): 15
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)