Query 046229
Match_columns 501
No_of_seqs 427 out of 2136
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:24:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qf4_A ABC transporter, ATP-bi 99.8 1.9E-17 6.5E-22 180.1 23.4 210 291-501 12-222 (587)
2 3qf4_B Uncharacterized ABC tra 99.8 3.9E-17 1.3E-21 178.1 25.8 206 295-501 30-236 (598)
3 4a82_A Cystic fibrosis transme 99.8 1.3E-17 4.5E-22 181.1 20.9 209 293-501 5-220 (578)
4 3b5x_A Lipid A export ATP-bind 99.8 3.7E-16 1.3E-20 169.8 30.3 208 293-501 16-224 (582)
5 4f4c_A Multidrug resistance pr 99.7 7E-18 2.4E-22 198.5 15.5 252 249-501 8-295 (1321)
6 3b60_A Lipid A export ATP-bind 99.7 2.6E-16 8.8E-21 171.1 26.2 208 293-501 16-224 (582)
7 2yl4_A ATP-binding cassette SU 99.7 6.4E-16 2.2E-20 168.4 26.7 209 293-501 10-221 (595)
8 3g5u_A MCG1178, multidrug resi 99.6 5E-14 1.7E-18 165.5 22.0 203 299-501 45-267 (1284)
9 4f4c_A Multidrug resistance pr 99.4 2.5E-12 8.7E-17 151.4 16.2 204 298-501 748-955 (1321)
10 3g5u_A MCG1178, multidrug resi 99.3 1E-10 3.6E-15 137.4 22.0 208 294-501 697-910 (1284)
11 3qf4_A ABC transporter, ATP-bi 93.5 3.7 0.00013 43.8 19.3 85 301-386 26-110 (587)
12 3qf4_B Uncharacterized ABC tra 93.1 7.8 0.00027 41.4 21.1 83 304-387 43-125 (598)
13 3b5x_A Lipid A export ATP-bind 92.3 13 0.00046 39.4 25.0 83 304-387 31-113 (582)
14 3b60_A Lipid A export ATP-bind 90.5 14 0.00047 39.3 19.3 41 346-386 72-112 (582)
15 2yl4_A ATP-binding cassette SU 90.5 20 0.0007 38.0 21.5 38 350-387 73-110 (595)
16 4a82_A Cystic fibrosis transme 85.2 12 0.0004 39.8 14.5 46 342-387 64-109 (578)
17 4hkr_A Calcium release-activat 40.0 2.1E+02 0.0072 25.8 10.5 41 452-492 151-191 (214)
No 1
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.77 E-value=1.9e-17 Score=180.05 Aligned_cols=210 Identities=12% Similarity=0.051 Sum_probs=179.8
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 291 KLVKALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVA 370 (501)
Q Consensus 291 ~l~~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l 370 (501)
+.++.+++.+++.++...++.++..++..+.|++++.++|...... +....+.++..+++..++..++.....+...+.
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 12 KTLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG-DFSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp CCGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678889999999999999999999999999999999865432 222334445555555666677777777888889
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 046229 371 GIKMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATF 449 (501)
Q Consensus 371 ~~rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl 449 (501)
+.++...++..+|+|+++++..+++++++|+++|++++|++++++++. .+..++..++.+++++++++...+..+++.+
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l 170 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLI 170 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887 5566777888888888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 450 SATVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 450 ~~~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
++++++.++...+.|+.++..++.++..+++.+.++|.++||++||.|++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 222 (587)
T 3qf4_A 171 FLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREE 222 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Confidence 8888888888899999999999999999999999999999999999999984
No 2
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.77 E-value=3.9e-17 Score=178.05 Aligned_cols=206 Identities=12% Similarity=0.091 Sum_probs=181.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 295 ALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKM 374 (501)
Q Consensus 295 ~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~ri 374 (501)
.+++.+++.++...++.++..++..+.|++++.++|.+..+.. ......++.++++..++..++.....+...+.+.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (598)
T 3qf4_B 30 GYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR-FDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDV 108 (598)
T ss_dssp GGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678888888999999999999999999999998754321 233344555566666777888888888899999999
Q ss_pred HHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 046229 375 RSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATFSATV 453 (501)
Q Consensus 375 r~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl~~~~ 453 (501)
...++..+|+|+++++..+++++++|+++|++++|++++++++. .+..++..++.+++++++++...++.+++.+++++
T Consensus 109 ~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~ 188 (598)
T 3qf4_B 109 VFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVP 188 (598)
T ss_dssp HHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987 78899999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 454 LVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 454 i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
+..++...+.++.++..++.++..+++.+.++|.++|+++||.|+||+
T Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 236 (598)
T 3qf4_B 189 LTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREE 236 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHcCChH
Confidence 888889999999999999999999999999999999999999999984
No 3
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=99.77 E-value=1.3e-17 Score=181.10 Aligned_cols=209 Identities=15% Similarity=0.103 Sum_probs=183.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccch--hhhH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 293 VKALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEF--KHKG----YVMVSTFFAAKLVESLSFTQWIFR 366 (501)
Q Consensus 293 ~~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~--~~~~----~~l~~~l~~~~li~~l~~~~~~~~ 366 (501)
++.+++.+++.++...++.++..++..+.|++++.++|.+...... .... +.+++++++..++..++.....+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (578)
T 4a82_A 5 YLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYL 84 (578)
T ss_dssp HHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457788899999999999999999999999999999987543211 1111 344555666677788888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 046229 367 LQVAGIKMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLAS 445 (501)
Q Consensus 367 ~~~l~~rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~a 445 (501)
..+.+.++...++..+|+|+++++..+++++++|+++|++++|++++++++. .++.++..++.+++++++++...++.+
T Consensus 85 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~ 164 (578)
T 4a82_A 85 AQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLT 164 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999999999999999999999999999887 577889999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 446 IATFSATVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 446 l~gl~~~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
+++++++++..++...+.++.++..++.++..+++.+.++|.++||++||+|+||+
T Consensus 165 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 220 (578)
T 4a82_A 165 LAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIED 220 (578)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccH
Confidence 88888888888888899999999999999999999999999999999999999984
No 4
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=99.75 E-value=3.7e-16 Score=169.82 Aligned_cols=208 Identities=10% Similarity=0.064 Sum_probs=179.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 293 VKALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGI 372 (501)
Q Consensus 293 ~~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~ 372 (501)
+..+.+.+++.++...++.++..++..+.|++++.++|.+..+.. ....+.++.++++..++..++.....+...+.+.
T Consensus 16 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (582)
T 3b5x_A 16 LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE-SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888888899999999999999999999998753221 1222333334555667778888888899999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 046229 373 KMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATFSA 451 (501)
Q Consensus 373 rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl~~ 451 (501)
++...++..+|+|.++++..+++++++|+++|++++|++.+++++. .+..++..++.+++++++++...++.+++.+++
T Consensus 95 ~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 174 (582)
T 3b5x_A 95 NVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVV 174 (582)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999865 778899999999999999998888888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 452 TVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 452 ~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
+++..++...+.|+.++..++.++..+++.+.+.|.++|+++||.|++|+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 224 (582)
T 3b5x_A 175 APVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQE 224 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCCcH
Confidence 78888888889999999999999999999999999999999999999984
No 5
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=99.74 E-value=7e-18 Score=198.55 Aligned_cols=252 Identities=13% Similarity=0.071 Sum_probs=186.8
Q ss_pred cCCCCCCCCCCCCCCCchhhhHHHHHHHHHhhhh-----------cCCCCCcchHHHHHHHH-HhHH---HHHHHHHHHH
Q 046229 249 KKILDREDVPQLDSGDSVMQGFPKFRNVLAADSV-----------VGNRVTTLKLVKALFFT-AWKE---IVFTAVLALI 313 (501)
Q Consensus 249 k~~L~~~Dlp~l~~~~~a~~~~~~f~~~~~~~~~-----------~~~~~~~~~l~~~l~~~-~~~~---l~l~~il~ll 313 (501)
+++|+.+|.+.+.++|..+...+.+++.|.+... +++..++.+ ++.+++- -+++ ++++.+++++
T Consensus 8 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~g~~~a~~ 86 (1321)
T 4f4c_A 8 RQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFIGTLVAVI 86 (1321)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred hcCCcccccccCCchhhcccccchhhhhcccccccccccchhhhhhhcccCCCC-HHHHhhccChHHHHHHHHHHHHHHH
Confidence 4678999999999999998888888776644210 001111222 3344431 1222 2333344444
Q ss_pred HHHHHhhhhHHHHHHhhhhcCcc----------------c----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 314 YTLANYVGPYLIDSFVKYLNGEQ----------------E----FKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIK 373 (501)
Q Consensus 314 ~~~~~~~~P~ll~~lid~l~~~~----------------~----~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~r 373 (501)
..+..-+.++++.++++.+.+.. . .......++..+++..+...++.....+.....+.|
T Consensus 87 ~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r 166 (1321)
T 4f4c_A 87 TGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQ 166 (1321)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333345666666542110 0 011222334444445555666677777778889999
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 046229 374 MRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATFSAT 452 (501)
Q Consensus 374 ir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl~~~ 452 (501)
+...+|..+|+|+++++.++++++++|+++|++++|++++++++. .+..++..++++++++++++...+..+++.++++
T Consensus 167 ~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~ 246 (1321)
T 4f4c_A 167 MNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVT 246 (1321)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999886 6788999999999999999999898899988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 453 VLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 453 ~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
++..++...+.|+.++..++.++..+++.+.++|.++|||+||+|+||+
T Consensus 247 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 247 PIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcccH
Confidence 8999999999999999999999999999999999999999999999984
No 6
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=99.74 E-value=2.6e-16 Score=171.10 Aligned_cols=208 Identities=7% Similarity=0.045 Sum_probs=178.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 293 VKALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGI 372 (501)
Q Consensus 293 ~~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~ 372 (501)
+..+.+.+++.++...++.++..++..+.|++++.++|.+..++ .....+.++.++++..++..++.....+...+.+.
T Consensus 16 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (582)
T 3b60_A 16 LWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT-DRSVLLWMPLVVIGLMILRGITSYISSYCISWVSG 94 (582)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST-THHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677888888889999999999999999999999775322 11222233334555667778888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 046229 373 KMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATFSA 451 (501)
Q Consensus 373 rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl~~ 451 (501)
++...++..+|+|.++++..+++++++|+++|++++|++.+++++. .+..++..++.+++++++++...++.+++.+++
T Consensus 95 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 174 (582)
T 3b60_A 95 KVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVL 174 (582)
T ss_dssp HHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876 778899999999999999998888888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 452 TVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 452 ~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
+++..++...+.|+.++..++.++..+++.+.+.|.++|+++||.|++|+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 224 (582)
T 3b60_A 175 APIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQE 224 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcCH
Confidence 77788888889999999999999999999999999999999999999974
No 7
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=99.73 E-value=6.4e-16 Score=168.40 Aligned_cols=209 Identities=14% Similarity=0.166 Sum_probs=176.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccc-hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 293 VKALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQE-FK-HKGYVMVSTFFAAKLVESLSFTQWIFRLQVA 370 (501)
Q Consensus 293 ~~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~-~~-~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l 370 (501)
+..+.+.+++.++...++.++..++..+.|++++.++|.+...+. .. ...+.++.++++..++..++.....+...+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (595)
T 2yl4_A 10 LLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTS 89 (595)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567778888888889999999999999999999997643211 11 1223333444455566677777778888999
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 046229 371 GIKMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATF 449 (501)
Q Consensus 371 ~~rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl 449 (501)
+.++...++..+|+|.++++..+++++++|+++|++++|++.+++++. .+..++..++.+++++++++...++.+++.+
T Consensus 90 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 169 (595)
T 2yl4_A 90 GQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVL 169 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999999999999999998865 7788899999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 450 SATVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 450 ~~~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
+++++..++...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+
T Consensus 170 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 221 (595)
T 2yl4_A 170 SVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEM 221 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCccH
Confidence 8778888888889999999999999999999999999999999999999974
No 8
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=99.58 E-value=5e-14 Score=165.49 Aligned_cols=203 Identities=9% Similarity=0.015 Sum_probs=168.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccc-------------------hhhhHHHHHHHHHHHHHHHHHH
Q 046229 299 TAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQE-------------------FKHKGYVMVSTFFAAKLVESLS 359 (501)
Q Consensus 299 ~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~-------------------~~~~~~~l~~~l~~~~li~~l~ 359 (501)
.+|..++.+.+++++..++....|+++..++|.+..... .......++..+++..++..++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 45 LDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777788888888888888888888886532110 0012233445555556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 046229 360 FTQWIFRLQVAGIKMRSVLVAMVYNKCLTLSCQAKQSHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILH 438 (501)
Q Consensus 360 ~~~~~~~~~~l~~rir~~L~~~Iy~K~LrLs~~~~~~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~ 438 (501)
.....+...+.+.++...++..+|+|+++++..+++++++|+++|++++|++.+++.+. .+..++..++.++.++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888899999999999999999999999999999999999999999999999887 66777888888888888888
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 439 KSLGLASIATFSATVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 439 ~~lg~~al~gl~~~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
...+..+++.+++++++..+...+.++.++..++.++..++..+.+.|.++||++||.|++|+
T Consensus 205 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 205 TRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHhcchH
Confidence 888888888888888888888999999999999999999999999999999999999999985
No 9
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=99.39 E-value=2.5e-12 Score=151.43 Aligned_cols=204 Identities=13% Similarity=0.087 Sum_probs=160.8
Q ss_pred HHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCcc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 298 FTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQ-EFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKMRS 376 (501)
Q Consensus 298 ~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~-~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~rir~ 376 (501)
+.+|..++++.++..+........++++...++...+++ .....+..+++++++..++..++.....+...+.+.++..
T Consensus 748 ~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~ 827 (1321)
T 4f4c_A 748 RPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTR 827 (1321)
T ss_dssp GGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666666665566666677777777664432 2223455566666666777778888888888999999999
Q ss_pred HHHHHHHHHHhcCChhhhcc--CChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 046229 377 VLVAMVYNKCLTLSCQAKQS--HTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIATFSATV 453 (501)
Q Consensus 377 ~L~~~Iy~K~LrLs~~~~~~--~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~gl~~~~ 453 (501)
.++..+|+|+++.+.++++. +++|+++|+++.|++.+.+.+. .+..++...+.+++++++++...+..+++.+++++
T Consensus 828 ~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~ 907 (1321)
T 4f4c_A 828 DLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILP 907 (1321)
T ss_dssp HHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhccCCCChHHHHhcchhhHHHHHHHHHHHHHHHHHHhhhHHHHeeeehHHhHHHHHHHHHHHH
Confidence 99999999999999999865 7899999999999999999876 67788888888888888888888888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 454 LVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 454 i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
++........++..+...+..+..++..+..+|.++|+++||.|++|+
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~ 955 (1321)
T 4f4c_A 908 IVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALARED 955 (1321)
T ss_dssp HHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhccchH
Confidence 777777777776666777777888888889999999999999999974
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=99.29 E-value=1e-10 Score=137.43 Aligned_cols=208 Identities=14% Similarity=0.098 Sum_probs=166.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 294 KALFFTAWKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQE---FKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVA 370 (501)
Q Consensus 294 ~~l~~~~~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~---~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l 370 (501)
..+.+.+|+.++.+.++.++...+....|+++..+++....... .......++..+++..++..++.....+...+.
T Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~ 776 (1284)
T 3g5u_A 697 LKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKA 776 (1284)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777888888888888888889999988887654321 112223344444555556666667777888899
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhc--cCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 046229 371 GIKMRSVLVAMVYNKCLTLSCQAKQ--SHTSGEVINFMTIDAQRVGDFSW-RMHDSWLVLLQVSLAMLILHKSLGLASIA 447 (501)
Q Consensus 371 ~~rir~~L~~~Iy~K~LrLs~~~~~--~~ssGeIinlms~D~~~I~~~~~-~~~~l~~~pl~iival~lL~~~lg~~al~ 447 (501)
+.++...++..+|+|+++++..+++ ++++|+++|++++|++.+++... .+..++...+.++.++++++...+..+++
T Consensus 777 ~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv 856 (1284)
T 3g5u_A 777 GEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLL 856 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999998 58899999999999999999887 56677777778888888777776767777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCC
Q 046229 448 TFSATVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMRILKLQGWEM 501 (501)
Q Consensus 448 gl~~~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr~IK~~awE~ 501 (501)
.+++++++..+.....++.++...+..+..++..+..+|.++|+++||.|++|+
T Consensus 857 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~ 910 (1284)
T 3g5u_A 857 LLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQ 910 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 777777777777788888888888888999999999999999999999999873
No 11
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=93.52 E-value=3.7 Score=43.84 Aligned_cols=85 Identities=12% Similarity=-0.023 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 301 WKEIVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKMRSVLVA 380 (501)
Q Consensus 301 ~~~l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~rir~~L~~ 380 (501)
...++...+..++.....+..-.++...+..-. .+.....+..++++.++..++..+......+...++..++|..+..
T Consensus 26 ~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 104 (587)
T 3qf4_A 26 VLAPLFMVVEVICDLSQPTLLARIVDEGIARGD-FSLVLKTGILMLIVALIGAVGGIGCTVFASYASQNFGADLRRDLFR 104 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555555555555556665543222 2222233444555555555666666777788889999999999988
Q ss_pred HHHHHH
Q 046229 381 MVYNKC 386 (501)
Q Consensus 381 ~Iy~K~ 386 (501)
.+.+..
T Consensus 105 ~ll~~~ 110 (587)
T 3qf4_A 105 KVLSFS 110 (587)
T ss_dssp HHHHCC
T ss_pred HHHCCC
Confidence 886643
No 12
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=93.09 E-value=7.8 Score=41.39 Aligned_cols=83 Identities=14% Similarity=0.058 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 304 IVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKMRSVLVAMVY 383 (501)
Q Consensus 304 l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~rir~~L~~~Iy 383 (501)
++...+..++..+..+..-.++..++..-.. +........++++.++..++..+..........++..++|..+...+.
T Consensus 43 ~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll 121 (598)
T 3qf4_B 43 FVFVTVSSILGVLSPYLIGKTIDVVFVPRRF-DLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQ 121 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555666666543222 222233444555555555666666667777888999999999988877
Q ss_pred HHHh
Q 046229 384 NKCL 387 (501)
Q Consensus 384 ~K~L 387 (501)
+.-.
T Consensus 122 ~~~~ 125 (598)
T 3qf4_B 122 RVPV 125 (598)
T ss_dssp HSCT
T ss_pred CCCH
Confidence 6443
No 13
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=92.27 E-value=13 Score=39.37 Aligned_cols=83 Identities=12% Similarity=0.002 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhhhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 304 IVFTAVLALIYTLANYVGPYLIDSFVKYLNGEQEFKHKGYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKMRSVLVAMVY 383 (501)
Q Consensus 304 l~l~~il~ll~~~~~~~~P~ll~~lid~l~~~~~~~~~~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~rir~~L~~~Iy 383 (501)
++...+..++..+..+..-.++..+...-. ..........++++.++..++..+..........++..++|..+...+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll 109 (582)
T 3b5x_A 31 TIALVINAAADTYMISLLKPLLDEGFGNAE-SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFM 109 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444442111 1112222333344444444555555666677778888888888888877
Q ss_pred HHHh
Q 046229 384 NKCL 387 (501)
Q Consensus 384 ~K~L 387 (501)
+.-.
T Consensus 110 ~~~~ 113 (582)
T 3b5x_A 110 HMPV 113 (582)
T ss_pred cCCH
Confidence 6544
No 14
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=90.54 E-value=14 Score=39.25 Aligned_cols=41 Identities=10% Similarity=0.010 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046229 346 VSTFFAAKLVESLSFTQWIFRLQVAGIKMRSVLVAMVYNKC 386 (501)
Q Consensus 346 ~~~l~~~~li~~l~~~~~~~~~~~l~~rir~~L~~~Iy~K~ 386 (501)
+++.++..++..+..........++..++|..+...+.+.-
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~ 112 (582)
T 3b60_A 72 IGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMP 112 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33333444455555556666777888888888887776544
No 15
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=90.46 E-value=20 Score=38.05 Aligned_cols=38 Identities=8% Similarity=0.046 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046229 350 FAAKLVESLSFTQWIFRLQVAGIKMRSVLVAMVYNKCL 387 (501)
Q Consensus 350 ~~~~li~~l~~~~~~~~~~~l~~rir~~L~~~Iy~K~L 387 (501)
++..++..+..........++..++|..+...+.+.-.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~ 110 (595)
T 2yl4_A 73 LCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEV 110 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 33344445555566677788888899888888766544
No 16
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=85.18 E-value=12 Score=39.78 Aligned_cols=46 Identities=9% Similarity=-0.027 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046229 342 GYVMVSTFFAAKLVESLSFTQWIFRLQVAGIKMRSVLVAMVYNKCL 387 (501)
Q Consensus 342 ~~~l~~~l~~~~li~~l~~~~~~~~~~~l~~rir~~L~~~Iy~K~L 387 (501)
+..+++..++..++..+..........++..++|..+...+.+.-.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 109 (578)
T 4a82_A 64 GIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSA 109 (578)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 3334444444455555566667777888888888888887765433
No 17
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=39.98 E-value=2.1e+02 Score=25.78 Aligned_cols=41 Identities=17% Similarity=0.189 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 046229 452 TVLVMLVNFPLGRLQVKFQDKLMKSKGKRMKATSEILRNMR 492 (501)
Q Consensus 452 ~~i~~~i~~~l~k~~~~~~~~~~~~~D~R~~~~~E~L~gIr 492 (501)
.++++|+...+.-..-++.+.....+-+|....-|-|+.++
T Consensus 151 t~vliPv~i~F~~Fa~hFYrsL~~hk~e~~~~~i~el~~~~ 191 (214)
T 4hkr_A 151 TVVLIPVMIIFMAFAIHFYRSLVSHKYEVTVSGIRELEMLK 191 (214)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444555555555555544444444443
Done!