Query 046230
Match_columns 489
No_of_seqs 343 out of 3182
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:58:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1357 Serine palmitoyltransf 100.0 9E-105 2E-109 759.3 35.1 477 1-477 34-513 (519)
2 PLN02483 serine palmitoyltrans 100.0 1.2E-88 2.5E-93 704.4 54.1 489 1-489 1-489 (489)
3 COG0156 BioF 7-keto-8-aminopel 100.0 5.1E-66 1.1E-70 508.7 40.4 386 50-463 2-387 (388)
4 PLN02955 8-amino-7-oxononanoat 100.0 3.1E-58 6.7E-63 463.3 39.3 350 97-471 99-466 (476)
5 KOG1360 5-aminolevulinate synt 100.0 1.5E-57 3.1E-62 428.1 32.1 398 50-471 128-529 (570)
6 KOG1359 Glycine C-acetyltransf 100.0 3E-56 6.5E-61 404.2 29.3 353 94-468 61-414 (417)
7 PLN02822 serine palmitoyltrans 100.0 2.7E-52 5.8E-57 431.9 43.2 373 70-468 95-479 (481)
8 PRK13393 5-aminolevulinate syn 100.0 7.9E-49 1.7E-53 401.2 43.0 353 99-469 44-399 (406)
9 COG4992 ArgD Ornithine/acetylo 100.0 5.3E-50 1.1E-54 386.8 32.2 346 66-468 23-400 (404)
10 TIGR01821 5aminolev_synth 5-am 100.0 9.6E-49 2.1E-53 400.4 42.9 353 99-469 44-399 (402)
11 PRK09064 5-aminolevulinate syn 100.0 3.6E-48 7.9E-53 396.9 42.9 355 99-471 45-402 (407)
12 PLN03227 serine palmitoyltrans 100.0 3.4E-48 7.4E-53 392.9 39.2 361 103-472 1-388 (392)
13 COG0160 GabT 4-aminobutyrate a 100.0 7E-47 1.5E-51 376.2 35.5 353 66-467 37-446 (447)
14 PRK13392 5-aminolevulinate syn 100.0 6.4E-46 1.4E-50 380.4 40.9 353 99-469 45-400 (410)
15 PRK07179 hypothetical protein; 100.0 5.6E-45 1.2E-49 373.1 44.8 385 51-473 21-405 (407)
16 TIGR01822 2am3keto_CoA 2-amino 100.0 8.9E-45 1.9E-49 370.4 44.2 373 66-469 19-392 (393)
17 PRK07505 hypothetical protein; 100.0 1E-43 2.2E-48 363.0 40.4 374 53-466 5-399 (402)
18 TIGR03246 arg_catab_astC succi 100.0 2.1E-44 4.6E-49 366.7 34.2 343 66-467 16-396 (397)
19 KOG1358 Serine palmitoyltransf 100.0 2.2E-44 4.8E-49 339.2 24.7 362 99-467 93-466 (467)
20 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.7E-42 8E-47 350.2 42.7 368 67-468 16-383 (385)
21 PRK11522 putrescine--2-oxoglut 100.0 4.9E-43 1.1E-47 359.6 35.1 357 66-469 62-454 (459)
22 PLN02760 4-aminobutyrate:pyruv 100.0 7.5E-43 1.6E-47 361.5 34.4 353 65-468 69-493 (504)
23 TIGR00858 bioF 8-amino-7-oxono 100.0 9.5E-42 2.1E-46 343.8 40.4 360 69-461 1-360 (360)
24 PRK05958 8-amino-7-oxononanoat 100.0 1.4E-41 3.1E-46 345.8 41.6 361 69-463 24-384 (385)
25 PRK04073 rocD ornithine--oxo-a 100.0 1.2E-42 2.7E-47 354.2 33.8 341 66-464 21-395 (396)
26 TIGR03372 putres_am_tran putre 100.0 2.6E-42 5.7E-47 351.9 35.2 346 71-464 61-442 (442)
27 COG0161 BioA Adenosylmethionin 100.0 1E-42 2.2E-47 344.1 30.2 348 68-468 27-445 (449)
28 PRK12381 bifunctional succinyl 100.0 3.5E-42 7.5E-47 351.5 34.4 346 66-468 20-401 (406)
29 PRK03715 argD acetylornithine 100.0 3.4E-42 7.3E-47 348.9 32.6 343 66-467 17-394 (395)
30 PRK12403 putative aminotransfe 100.0 1.1E-41 2.4E-46 350.9 36.5 352 67-468 36-454 (460)
31 PRK06939 2-amino-3-ketobutyrat 100.0 6.4E-41 1.4E-45 342.4 41.9 369 69-468 26-395 (397)
32 PRK08117 4-aminobutyrate amino 100.0 1.2E-41 2.7E-46 350.1 34.4 350 69-467 27-430 (433)
33 PRK07678 aminotransferase; Val 100.0 2.4E-41 5.2E-46 347.9 35.9 353 68-467 30-450 (451)
34 PRK06062 hypothetical protein; 100.0 3E-41 6.5E-46 346.8 36.4 349 66-468 34-447 (451)
35 TIGR01885 Orn_aminotrans ornit 100.0 2.6E-41 5.6E-46 345.2 35.2 346 66-464 18-400 (401)
36 COG0001 HemL Glutamate-1-semia 100.0 2.3E-41 5E-46 330.2 32.7 348 66-468 34-430 (432)
37 KOG1402 Ornithine aminotransfe 100.0 2.5E-42 5.5E-47 318.4 24.1 344 66-465 40-426 (427)
38 PRK08593 4-aminobutyrate amino 100.0 6.5E-41 1.4E-45 344.1 36.8 354 67-470 24-433 (445)
39 PRK06082 4-aminobutyrate amino 100.0 3.8E-41 8.1E-46 346.5 34.4 349 66-469 53-454 (459)
40 PRK05937 8-amino-7-oxononanoat 100.0 2.5E-40 5.4E-45 334.2 39.4 345 100-471 4-355 (370)
41 PRK05093 argD bifunctional N-s 100.0 8.2E-41 1.8E-45 341.6 36.0 346 65-467 20-401 (403)
42 PRK05965 hypothetical protein; 100.0 8.2E-41 1.8E-45 344.3 35.3 349 68-467 29-448 (459)
43 PLN02624 ornithine-delta-amino 100.0 1.3E-40 2.8E-45 344.5 36.8 349 66-467 56-445 (474)
44 PRK06058 4-aminobutyrate amino 100.0 5.2E-41 1.1E-45 345.4 33.2 355 66-466 37-442 (443)
45 PRK06105 aminotransferase; Pro 100.0 8.7E-41 1.9E-45 344.2 34.3 355 66-469 29-452 (460)
46 PRK07482 hypothetical protein; 100.0 1.6E-40 3.6E-45 342.2 36.0 350 68-467 33-455 (461)
47 PRK01278 argD acetylornithine 100.0 8.3E-41 1.8E-45 340.3 32.9 342 66-466 12-388 (389)
48 PRK07986 adenosylmethionine--8 100.0 6.1E-41 1.3E-45 341.6 31.6 344 69-466 27-423 (428)
49 PRK13360 omega amino acid--pyr 100.0 3.1E-40 6.6E-45 338.5 35.9 348 67-467 28-441 (442)
50 PRK06943 adenosylmethionine--8 100.0 2.9E-40 6.3E-45 339.4 35.4 347 67-467 36-447 (453)
51 PRK06173 adenosylmethionine--8 100.0 1.5E-40 3.3E-45 339.1 32.9 344 70-467 29-426 (429)
52 PRK06938 diaminobutyrate--2-ox 100.0 3.1E-40 6.8E-45 339.7 35.3 353 66-467 44-461 (464)
53 PRK03244 argD acetylornithine 100.0 2E-40 4.4E-45 338.6 33.6 341 67-467 25-395 (398)
54 PRK00854 rocD ornithine--oxo-a 100.0 4.5E-40 9.7E-45 336.4 35.8 345 65-465 21-400 (401)
55 PRK00615 glutamate-1-semialdeh 100.0 1.3E-40 2.9E-45 339.2 31.7 346 66-467 34-429 (433)
56 PRK05639 4-aminobutyrate amino 100.0 6.2E-40 1.3E-44 337.0 36.7 357 66-467 34-444 (457)
57 PLN02482 glutamate-1-semialdeh 100.0 2.2E-40 4.7E-45 340.2 33.3 342 67-466 81-473 (474)
58 KOG1404 Alanine-glyoxylate ami 100.0 9E-41 2E-45 315.5 26.8 346 68-460 33-432 (442)
59 PRK12389 glutamate-1-semialdeh 100.0 7.4E-40 1.6E-44 335.5 35.8 343 66-466 34-427 (428)
60 PRK04612 argD acetylornithine 100.0 6.7E-40 1.5E-44 332.9 35.2 346 66-467 21-404 (408)
61 PRK09221 beta alanine--pyruvat 100.0 8.4E-40 1.8E-44 335.5 36.1 349 67-467 31-444 (445)
62 PRK07483 hypothetical protein; 100.0 6.8E-40 1.5E-44 336.0 34.8 358 65-467 10-438 (443)
63 PRK05964 adenosylmethionine--8 100.0 7.5E-40 1.6E-44 335.9 35.0 351 66-467 23-423 (423)
64 PRK09264 diaminobutyrate--2-ox 100.0 1E-39 2.2E-44 334.4 35.9 355 66-468 20-418 (425)
65 PLN00144 acetylornithine trans 100.0 5.6E-40 1.2E-44 331.7 33.3 340 71-467 1-381 (382)
66 PRK06541 hypothetical protein; 100.0 1.3E-39 2.9E-44 335.1 36.4 353 68-468 35-457 (460)
67 PRK07480 putative aminotransfe 100.0 9.4E-40 2E-44 335.8 35.2 348 68-467 33-449 (456)
68 PRK07030 adenosylmethionine--8 100.0 1.1E-39 2.3E-44 335.9 35.5 345 69-467 31-447 (466)
69 TIGR02407 ectoine_ectB diamino 100.0 1.4E-39 3E-44 331.8 35.2 353 65-465 15-411 (412)
70 PRK07495 4-aminobutyrate amino 100.0 1.8E-39 4E-44 331.4 36.0 352 68-468 23-423 (425)
71 PTZ00125 ornithine aminotransf 100.0 1.5E-39 3.2E-44 332.6 35.1 349 65-468 11-397 (400)
72 PRK06917 hypothetical protein; 100.0 9.2E-40 2E-44 335.4 33.5 359 66-467 13-438 (447)
73 PRK05630 adenosylmethionine--8 100.0 1.3E-39 2.8E-44 331.9 34.0 349 66-466 21-420 (422)
74 PRK07481 hypothetical protein; 100.0 2.8E-39 6.1E-44 332.3 36.5 354 67-468 24-447 (449)
75 PRK08742 adenosylmethionine--8 100.0 2.1E-39 4.5E-44 333.6 35.5 345 69-467 48-468 (472)
76 PRK06916 adenosylmethionine--8 100.0 1.4E-39 3.1E-44 335.1 34.3 348 67-468 38-457 (460)
77 PRK07036 hypothetical protein; 100.0 2.7E-39 5.8E-44 333.4 36.2 350 66-467 32-453 (466)
78 PRK02936 argD acetylornithine 100.0 1.5E-39 3.3E-44 329.8 33.8 339 66-463 10-376 (377)
79 PRK05769 4-aminobutyrate amino 100.0 3.2E-39 7E-44 331.1 36.1 350 66-467 35-440 (441)
80 cd06454 KBL_like KBL_like; thi 100.0 9.5E-39 2.1E-43 320.7 38.6 348 100-463 1-348 (349)
81 PRK06931 diaminobutyrate--2-ox 100.0 4.2E-39 9.2E-44 331.3 36.4 357 66-467 39-455 (459)
82 TIGR00709 dat 2,4-diaminobutyr 100.0 5.3E-39 1.2E-43 330.2 36.8 357 66-467 20-436 (442)
83 PRK08360 4-aminobutyrate amino 100.0 5.5E-39 1.2E-43 329.3 36.1 352 66-468 22-428 (443)
84 cd00610 OAT_like Acetyl ornith 100.0 4.4E-39 9.5E-44 330.7 34.7 347 66-463 17-412 (413)
85 PRK08297 L-lysine aminotransfe 100.0 2E-39 4.3E-44 332.6 31.5 353 63-467 20-442 (443)
86 PRK09792 4-aminobutyrate trans 100.0 5.5E-39 1.2E-43 328.4 34.2 349 68-465 23-420 (421)
87 PRK06777 4-aminobutyrate amino 100.0 1.2E-38 2.5E-43 326.0 34.8 350 67-465 22-420 (421)
88 TIGR00699 GABAtrns_euk 4-amino 100.0 9.8E-40 2.1E-44 333.3 26.8 343 66-464 39-464 (464)
89 PRK04013 argD acetylornithine/ 100.0 7E-39 1.5E-43 319.4 31.6 332 67-467 6-361 (364)
90 PRK06149 hypothetical protein; 100.0 1.3E-38 2.8E-43 354.5 36.1 350 67-466 567-970 (972)
91 TIGR00700 GABAtrnsam 4-aminobu 100.0 3.9E-38 8.4E-43 322.7 35.0 351 66-465 14-419 (420)
92 PRK07046 aminotransferase; Val 100.0 4.1E-38 9E-43 323.1 32.7 343 65-467 55-451 (453)
93 TIGR00508 bioA adenosylmethion 100.0 6.9E-38 1.5E-42 320.3 32.9 344 69-466 29-426 (427)
94 PRK06148 hypothetical protein; 100.0 1.1E-37 2.3E-42 347.1 35.2 351 66-467 605-1011(1013)
95 PRK04260 acetylornithine amino 100.0 1.3E-37 2.9E-42 315.2 32.8 333 67-463 11-374 (375)
96 PRK00062 glutamate-1-semialdeh 100.0 1.7E-37 3.7E-42 318.3 31.9 344 68-467 33-425 (426)
97 PRK06918 4-aminobutyrate amino 100.0 5.2E-37 1.1E-41 316.8 35.0 352 67-467 36-444 (451)
98 TIGR03251 LAT_fam L-lysine 6-t 100.0 2E-37 4.3E-42 317.6 29.8 349 63-462 13-430 (431)
99 TIGR00713 hemL glutamate-1-sem 100.0 9.2E-37 2E-41 313.8 33.0 343 66-467 29-423 (423)
100 PRK02627 acetylornithine amino 100.0 2.9E-36 6.4E-41 307.9 34.7 343 66-467 20-395 (396)
101 PRK08088 4-aminobutyrate amino 100.0 7.3E-36 1.6E-40 306.6 33.8 353 66-467 22-424 (425)
102 TIGR00707 argD acetylornithine 100.0 2.4E-35 5.1E-40 299.5 34.0 337 66-463 8-378 (379)
103 PRK06209 glutamate-1-semialdeh 100.0 2.9E-36 6.3E-41 309.0 27.4 342 66-467 29-406 (431)
104 KOG1401 Acetylornithine aminot 100.0 6.5E-35 1.4E-39 278.1 28.1 351 66-468 37-432 (433)
105 TIGR03576 pyridox_MJ0158 pyrid 100.0 5E-33 1.1E-37 276.8 32.4 307 107-464 26-345 (346)
106 PLN02974 adenosylmethionine-8- 100.0 3.2E-33 6.9E-38 300.8 32.7 351 69-464 341-816 (817)
107 PF00202 Aminotran_3: Aminotra 100.0 2.3E-33 5E-38 278.8 22.1 273 71-388 2-316 (339)
108 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.9E-31 4.2E-36 269.4 36.3 321 117-466 17-368 (370)
109 PRK13034 serine hydroxymethylt 100.0 9.3E-32 2E-36 274.7 33.2 333 100-467 28-393 (416)
110 KOG1403 Predicted alanine-glyo 100.0 6.5E-32 1.4E-36 246.5 18.9 355 68-471 30-442 (452)
111 COG0436 Aspartate/tyrosine/aro 100.0 5.9E-30 1.3E-34 258.2 34.8 335 100-467 28-392 (393)
112 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.7E-29 1E-33 253.5 36.9 304 139-470 56-385 (387)
113 PF00155 Aminotran_1_2: Aminot 100.0 3.9E-30 8.6E-35 259.7 24.9 336 101-460 2-363 (363)
114 PRK13580 serine hydroxymethylt 100.0 3.8E-28 8.3E-33 245.5 33.0 339 100-467 49-446 (493)
115 PRK07681 aspartate aminotransf 100.0 1.9E-27 4.1E-32 242.9 35.7 331 99-463 31-385 (399)
116 PRK02731 histidinol-phosphate 100.0 1.3E-27 2.9E-32 241.6 34.1 321 99-465 31-365 (367)
117 PLN03226 serine hydroxymethylt 100.0 1.9E-27 4.2E-32 244.9 34.3 338 100-467 34-420 (475)
118 PLN00175 aminotransferase fami 100.0 4.9E-27 1.1E-31 240.4 36.6 331 100-465 54-412 (413)
119 COG1167 ARO8 Transcriptional r 100.0 6E-27 1.3E-31 241.5 35.9 345 100-468 89-457 (459)
120 PRK08068 transaminase; Reviewe 100.0 5.2E-27 1.1E-31 239.0 34.8 331 99-462 31-385 (389)
121 PRK06108 aspartate aminotransf 100.0 5.7E-27 1.2E-31 238.3 34.6 332 100-465 24-381 (382)
122 PRK07682 hypothetical protein; 100.0 5.5E-27 1.2E-31 237.9 33.7 331 101-467 21-377 (378)
123 PRK06207 aspartate aminotransf 100.0 1.9E-26 4.2E-31 235.6 37.3 340 99-467 38-403 (405)
124 PRK09276 LL-diaminopimelate am 100.0 8.6E-27 1.9E-31 237.1 34.5 331 99-462 30-384 (385)
125 PRK03317 histidinol-phosphate 100.0 1E-26 2.3E-31 235.0 34.3 320 101-465 27-363 (368)
126 PRK08912 hypothetical protein; 100.0 1.3E-26 2.8E-31 235.9 35.2 331 100-465 26-385 (387)
127 TIGR03540 DapC_direct LL-diami 100.0 2.2E-26 4.8E-31 234.0 36.0 331 99-462 28-382 (383)
128 cd06502 TA_like Low-specificit 100.0 9.3E-28 2E-32 239.9 25.5 323 104-462 1-337 (338)
129 PRK09082 methionine aminotrans 100.0 9.2E-27 2E-31 236.8 33.0 332 100-462 30-385 (386)
130 PRK08153 histidinol-phosphate 100.0 2.6E-26 5.5E-31 232.0 35.8 328 99-468 30-367 (369)
131 PRK07324 transaminase; Validat 100.0 1.2E-26 2.5E-31 234.7 33.1 328 99-466 25-370 (373)
132 PRK05957 aspartate aminotransf 100.0 2.7E-26 5.9E-31 233.5 36.0 339 101-467 28-386 (389)
133 PRK00950 histidinol-phosphate 100.0 1.2E-26 2.6E-31 234.1 32.8 315 99-464 33-360 (361)
134 PRK05942 aspartate aminotransf 100.0 3.3E-26 7.2E-31 233.4 36.0 331 99-462 34-388 (394)
135 PRK07366 succinyldiaminopimela 100.0 2.2E-26 4.8E-31 234.3 34.3 332 99-463 29-387 (388)
136 cd06451 AGAT_like Alanine-glyo 100.0 4.9E-26 1.1E-30 229.2 36.2 316 118-465 8-356 (356)
137 PRK03158 histidinol-phosphate 100.0 1.6E-26 3.4E-31 233.0 32.7 317 100-463 29-358 (359)
138 TIGR01141 hisC histidinol-phos 100.0 1.8E-26 3.9E-31 231.4 32.8 316 99-461 18-346 (346)
139 PRK06290 aspartate aminotransf 100.0 6.6E-26 1.4E-30 231.5 36.4 334 99-469 43-408 (410)
140 PRK12414 putative aminotransfe 100.0 5.9E-26 1.3E-30 230.6 35.9 334 99-462 28-383 (384)
141 PLN02721 threonine aldolase 100.0 1.4E-26 3.1E-31 232.8 30.8 330 100-466 5-352 (353)
142 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.9E-26 1.9E-30 227.6 36.0 320 117-464 10-360 (361)
143 cd00378 SHMT Serine-glycine hy 100.0 2.9E-26 6.2E-31 234.7 32.2 336 100-466 19-385 (402)
144 PRK08175 aminotransferase; Val 100.0 1.2E-25 2.6E-30 229.4 36.3 340 99-469 28-392 (395)
145 PRK10874 cysteine sulfinate de 100.0 6.4E-26 1.4E-30 232.0 34.3 324 117-467 32-399 (401)
146 PRK05764 aspartate aminotransf 100.0 7.9E-26 1.7E-30 230.8 34.6 332 99-467 30-392 (393)
147 PRK07309 aromatic amino acid a 100.0 9.5E-26 2.1E-30 229.7 34.9 336 100-467 30-389 (391)
148 PRK15481 transcriptional regul 100.0 7.8E-26 1.7E-30 233.3 34.5 292 148-465 123-430 (431)
149 PRK08960 hypothetical protein; 100.0 6.9E-26 1.5E-30 230.6 33.5 332 99-465 31-386 (387)
150 PRK08636 aspartate aminotransf 100.0 2.2E-25 4.7E-30 228.0 37.3 342 99-466 32-400 (403)
151 TIGR03392 FeS_syn_CsdA cystein 100.0 1.2E-25 2.5E-30 229.9 35.2 336 100-467 17-396 (398)
152 COG0079 HisC Histidinol-phosph 100.0 2.1E-25 4.6E-30 221.3 35.4 318 101-466 23-354 (356)
153 PTZ00377 alanine aminotransfer 100.0 2.1E-25 4.6E-30 232.7 37.2 335 119-471 92-480 (481)
154 PRK02948 cysteine desulfurase; 100.0 3.7E-26 8E-31 232.2 30.4 323 116-467 12-375 (381)
155 PRK01533 histidinol-phosphate 100.0 5.4E-26 1.2E-30 228.9 31.2 320 99-470 28-359 (366)
156 PLN03026 histidinol-phosphate 100.0 2.7E-25 5.9E-30 225.2 35.7 318 99-463 51-379 (380)
157 PRK07777 aminotransferase; Val 100.0 4E-25 8.6E-30 225.0 36.6 330 100-464 24-384 (387)
158 PRK06348 aspartate aminotransf 100.0 2.9E-25 6.3E-30 225.7 35.3 327 101-463 30-382 (384)
159 TIGR01979 sufS cysteine desulf 100.0 1.7E-25 3.7E-30 229.1 33.9 325 117-468 31-403 (403)
160 COG1168 MalY Bifunctional PLP- 100.0 2E-25 4.3E-30 212.6 31.6 323 111-467 35-387 (388)
161 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.6E-25 3.4E-30 228.9 33.4 321 117-460 30-397 (397)
162 PRK08361 aspartate aminotransf 100.0 1.2E-25 2.6E-30 229.1 32.4 334 100-466 33-390 (391)
163 TIGR03537 DapC succinyldiamino 100.0 3E-25 6.5E-30 222.8 34.5 324 101-462 1-349 (350)
164 PRK09148 aminotransferase; Val 100.0 4.3E-25 9.3E-30 225.8 35.7 340 99-468 29-392 (405)
165 PRK07683 aminotransferase A; V 100.0 3.5E-25 7.6E-30 225.2 34.7 333 100-466 28-383 (387)
166 TIGR01264 tyr_amTase_E tyrosin 100.0 4.3E-25 9.3E-30 225.8 35.2 335 99-467 30-400 (401)
167 PRK06225 aspartate aminotransf 100.0 4.8E-25 1E-29 223.9 35.1 333 99-468 27-378 (380)
168 TIGR03539 DapC_actino succinyl 100.0 3.4E-25 7.4E-30 222.9 33.3 317 99-460 20-356 (357)
169 PRK07865 N-succinyldiaminopime 100.0 2.7E-25 5.9E-30 224.4 32.7 318 99-461 26-363 (364)
170 PRK05387 histidinol-phosphate 99.9 5.7E-25 1.2E-29 221.2 34.5 319 99-465 23-352 (353)
171 PLN02187 rooty/superroot1 99.9 4.9E-25 1.1E-29 228.1 34.3 343 99-471 65-443 (462)
172 PRK09147 succinyldiaminopimela 99.9 1.4E-24 3E-29 221.7 36.8 328 99-464 28-394 (396)
173 PTZ00433 tyrosine aminotransfe 99.9 9.9E-25 2.2E-29 223.7 35.7 336 98-467 31-409 (412)
174 PLN00145 tyrosine/nicotianamin 99.9 9.8E-25 2.1E-29 224.3 35.4 337 99-468 51-426 (430)
175 PRK00011 glyA serine hydroxyme 99.9 6.1E-25 1.3E-29 225.8 33.9 336 100-466 25-389 (416)
176 PRK06107 aspartate aminotransf 99.9 9.5E-25 2.1E-29 223.2 35.0 337 99-467 32-401 (402)
177 PRK07550 hypothetical protein; 99.9 1.3E-24 2.8E-29 221.2 35.7 332 99-463 28-384 (386)
178 PRK03321 putative aminotransfe 99.9 4E-25 8.6E-30 222.2 31.3 316 101-465 23-350 (352)
179 cd00613 GDC-P Glycine cleavage 99.9 1.7E-25 3.7E-30 228.7 28.7 313 115-460 32-398 (398)
180 PRK07590 L,L-diaminopimelate a 99.9 4.9E-25 1.1E-29 225.8 31.7 337 99-463 33-408 (409)
181 TIGR03538 DapC_gpp succinyldia 99.9 1.5E-24 3.3E-29 221.1 34.9 327 99-463 27-392 (393)
182 PRK13355 bifunctional HTH-doma 99.9 1.2E-24 2.6E-29 228.9 34.8 338 97-467 143-515 (517)
183 PRK07337 aminotransferase; Val 99.9 9.2E-25 2E-29 222.4 32.5 331 99-464 29-387 (388)
184 cd00609 AAT_like Aspartate ami 99.9 1.9E-24 4.1E-29 216.5 34.4 329 104-461 2-349 (350)
185 PRK06425 histidinol-phosphate 99.9 2.1E-24 4.5E-29 215.0 34.2 281 148-464 42-331 (332)
186 KOG0257 Kynurenine aminotransf 99.9 7.4E-26 1.6E-30 217.6 22.5 330 111-461 38-414 (420)
187 PRK08363 alanine aminotransfer 99.9 1E-24 2.3E-29 222.7 32.3 336 99-466 29-394 (398)
188 cd06453 SufS_like Cysteine des 99.9 1.4E-24 3E-29 220.1 32.7 323 111-460 6-373 (373)
189 PRK05664 threonine-phosphate d 99.9 4.6E-24 1E-28 212.2 35.8 302 100-466 20-328 (330)
190 PRK09295 bifunctional cysteine 99.9 1.5E-24 3.2E-29 222.2 33.0 335 100-466 24-404 (406)
191 PRK13520 L-tyrosine decarboxyl 99.9 2.3E-24 5E-29 218.3 34.0 318 116-465 32-370 (371)
192 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4.2E-24 9.1E-29 214.9 35.6 314 118-463 8-354 (355)
193 PRK06855 aminotransferase; Val 99.9 2.2E-24 4.9E-29 222.1 33.6 338 99-466 31-429 (433)
194 PLN02656 tyrosine transaminase 99.9 2.3E-24 5E-29 220.7 33.3 336 99-467 30-404 (409)
195 PRK10534 L-threonine aldolase; 99.9 2.9E-25 6.2E-30 221.5 25.6 320 102-465 1-332 (333)
196 TIGR03542 DAPAT_plant LL-diami 99.9 2.2E-24 4.8E-29 220.5 32.4 339 99-463 32-401 (402)
197 PRK14807 histidinol-phosphate 99.9 1E-23 2.2E-28 211.8 36.5 316 102-464 24-350 (351)
198 COG0520 csdA Selenocysteine ly 99.9 5.1E-24 1.1E-28 214.8 34.0 323 116-465 34-404 (405)
199 PLN00143 tyrosine/nicotianamin 99.9 7.7E-24 1.7E-28 216.7 36.0 337 99-468 31-406 (409)
200 PRK14809 histidinol-phosphate 99.9 5.9E-24 1.3E-28 214.1 34.4 316 99-465 29-356 (357)
201 PRK07568 aspartate aminotransf 99.9 9.6E-24 2.1E-28 215.7 36.4 295 148-468 68-394 (397)
202 PRK04870 histidinol-phosphate 99.9 6.7E-24 1.5E-28 213.6 34.2 319 99-463 25-355 (356)
203 PLN02855 Bifunctional selenocy 99.9 3.4E-24 7.4E-29 220.7 32.7 324 117-467 45-419 (424)
204 TIGR02326 transamin_PhnW 2-ami 99.9 1.1E-23 2.4E-28 212.7 35.7 315 117-465 11-361 (363)
205 PRK09265 aminotransferase AlaT 99.9 6.8E-24 1.5E-28 217.1 34.6 333 99-467 32-402 (404)
206 TIGR01265 tyr_nico_aTase tyros 99.9 7E-24 1.5E-28 216.9 34.7 334 99-466 30-401 (403)
207 PLN02376 1-aminocyclopropane-1 99.9 5.4E-24 1.2E-28 221.5 34.0 303 147-467 95-439 (496)
208 PLN02450 1-aminocyclopropane-1 99.9 5.9E-24 1.3E-28 220.4 33.9 302 149-468 89-432 (468)
209 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.2E-24 1.8E-28 214.4 34.3 327 99-462 22-372 (373)
210 PTZ00094 serine hydroxymethylt 99.9 4E-24 8.6E-29 221.2 31.6 338 100-467 34-409 (452)
211 PRK06959 putative threonine-ph 99.9 1.5E-23 3.2E-28 209.1 34.1 303 100-468 24-335 (339)
212 PRK13479 2-aminoethylphosphona 99.9 3.4E-23 7.4E-28 209.4 36.8 320 117-468 13-365 (368)
213 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.7E-23 3.7E-28 208.3 33.4 272 149-460 50-329 (330)
214 PRK09105 putative aminotransfe 99.9 1.9E-23 4.1E-28 210.9 34.1 314 100-464 43-368 (370)
215 PLN02231 alanine transaminase 99.9 2.5E-23 5.4E-28 217.7 35.9 336 117-472 142-533 (534)
216 PRK08056 threonine-phosphate d 99.9 2.8E-23 6.2E-28 208.9 35.0 317 99-464 19-353 (356)
217 PRK06358 threonine-phosphate d 99.9 3.9E-23 8.5E-28 207.6 35.7 317 100-464 19-353 (354)
218 PLN02672 methionine S-methyltr 99.9 2.1E-23 4.5E-28 228.0 35.6 337 99-466 696-1080(1082)
219 TIGR03402 FeS_nifS cysteine de 99.9 1.9E-23 4.1E-28 212.2 32.9 324 114-468 9-374 (379)
220 PRK06836 aspartate aminotransf 99.9 4.3E-23 9.3E-28 210.4 35.5 329 99-467 32-392 (394)
221 PLN02607 1-aminocyclopropane-1 99.9 2.6E-23 5.7E-28 214.0 34.1 306 148-469 97-440 (447)
222 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.8E-23 4E-28 212.1 32.3 318 117-462 13-375 (376)
223 PRK07392 threonine-phosphate d 99.9 5.9E-23 1.3E-27 207.0 35.3 319 100-464 22-357 (360)
224 TIGR01814 kynureninase kynuren 99.9 2.9E-23 6.3E-28 212.5 33.6 318 111-464 36-405 (406)
225 PRK05839 hypothetical protein; 99.9 5.6E-23 1.2E-27 208.0 34.2 323 99-465 23-373 (374)
226 PLN02409 serine--glyoxylate am 99.9 1.2E-22 2.7E-27 207.2 36.9 325 117-470 17-376 (401)
227 PRK02610 histidinol-phosphate 99.9 1.5E-22 3.2E-27 205.1 35.7 322 101-467 29-372 (374)
228 cd00614 CGS_like CGS_like: Cys 99.9 1.8E-23 3.8E-28 211.1 27.6 283 144-464 38-368 (369)
229 PRK05166 histidinol-phosphate 99.9 1.4E-22 3E-27 205.0 34.3 319 99-464 35-369 (371)
230 PRK13238 tnaA tryptophanase/L- 99.9 2.6E-22 5.6E-27 206.6 35.8 342 99-466 35-433 (460)
231 TIGR02006 IscS cysteine desulf 99.9 5.8E-23 1.3E-27 210.0 30.9 334 100-468 4-379 (402)
232 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-22 3.2E-27 203.5 32.9 284 145-461 17-352 (352)
233 TIGR01437 selA_rel uncharacter 99.9 1.8E-22 3.8E-27 203.0 32.8 321 99-463 7-362 (363)
234 PLN02242 methionine gamma-lyas 99.9 4.2E-23 9.1E-28 210.3 28.4 288 145-468 75-417 (418)
235 PRK07908 hypothetical protein; 99.9 4.9E-22 1.1E-26 199.5 34.8 319 99-465 21-346 (349)
236 PRK14808 histidinol-phosphate 99.9 2.4E-22 5.3E-27 200.2 31.9 308 99-462 18-333 (335)
237 PRK01688 histidinol-phosphate 99.9 1.9E-22 4.2E-27 202.3 29.7 277 149-460 60-350 (351)
238 PTZ00376 aspartate aminotransf 99.9 4E-22 8.6E-27 203.9 31.9 333 100-466 29-403 (404)
239 TIGR03403 nifS_epsilon cystein 99.9 6.9E-22 1.5E-26 200.9 33.2 323 116-468 11-377 (382)
240 PF00266 Aminotran_5: Aminotra 99.9 8.4E-22 1.8E-26 199.5 32.9 318 112-456 7-371 (371)
241 COG1104 NifS Cysteine sulfinat 99.9 6E-22 1.3E-26 192.7 30.3 322 117-468 14-379 (386)
242 PRK04781 histidinol-phosphate 99.9 1.4E-21 3.1E-26 197.0 34.2 283 148-464 61-361 (364)
243 PRK03967 histidinol-phosphate 99.9 1E-21 2.2E-26 196.0 32.6 310 99-468 17-336 (337)
244 PLN02397 aspartate transaminas 99.9 7.9E-22 1.7E-26 202.5 32.4 330 99-465 47-420 (423)
245 PRK04635 histidinol-phosphate 99.9 1E-21 2.2E-26 197.5 31.0 277 148-462 62-351 (354)
246 TIGR01328 met_gam_lyase methio 99.9 4.1E-22 9E-27 201.9 27.9 211 146-388 59-277 (391)
247 PRK14012 cysteine desulfurase; 99.9 5.9E-22 1.3E-26 202.8 29.3 322 116-468 15-381 (404)
248 PRK06234 methionine gamma-lyas 99.9 7.4E-22 1.6E-26 200.8 29.7 285 146-466 64-397 (400)
249 cd06450 DOPA_deC_like DOPA dec 99.9 1E-21 2.2E-26 196.8 29.5 277 143-462 35-344 (345)
250 PLN02651 cysteine desulfurase 99.9 9.3E-22 2E-26 198.6 28.6 311 114-454 9-364 (364)
251 PRK09257 aromatic amino acid a 99.9 1.9E-21 4E-26 198.6 30.7 285 148-463 71-395 (396)
252 KOG0259 Tyrosine aminotransfer 99.9 1.3E-20 2.8E-25 178.5 32.5 336 99-468 60-435 (447)
253 PRK09440 avtA valine--pyruvate 99.9 4.7E-21 1E-25 197.0 31.5 291 148-467 76-412 (416)
254 PRK08637 hypothetical protein; 99.9 1.4E-20 3.1E-25 191.5 34.5 321 118-467 19-387 (388)
255 PRK08354 putative aminotransfe 99.9 1.6E-20 3.4E-25 185.4 33.8 293 100-463 8-309 (311)
256 PRK06767 methionine gamma-lyas 99.9 1.5E-21 3.3E-26 197.8 27.0 283 146-465 61-384 (386)
257 COG0075 Serine-pyruvate aminot 99.9 3.5E-20 7.6E-25 181.8 34.9 322 119-471 15-368 (383)
258 PRK04366 glycine dehydrogenase 99.9 7E-21 1.5E-25 198.0 31.6 322 117-468 83-450 (481)
259 PRK09275 aspartate aminotransf 99.9 2.3E-21 5.1E-26 200.4 26.8 296 149-471 137-522 (527)
260 TIGR03235 DNA_S_dndA cysteine 99.9 2.3E-21 5E-26 195.0 25.8 306 116-454 10-346 (353)
261 TIGR01324 cysta_beta_ly_B cyst 99.9 7.2E-21 1.6E-25 191.5 29.0 283 145-465 49-375 (377)
262 KOG0256 1-aminocyclopropane-1- 99.9 5.9E-21 1.3E-25 182.3 26.4 336 111-466 78-461 (471)
263 KOG1405 4-aminobutyrate aminot 99.9 1.2E-21 2.7E-26 183.1 20.7 352 67-466 58-483 (484)
264 PRK05968 hypothetical protein; 99.9 7.6E-21 1.6E-25 192.7 27.9 283 145-461 62-385 (389)
265 PRK08249 cystathionine gamma-s 99.9 1E-20 2.2E-25 191.9 28.5 210 145-388 63-280 (398)
266 PRK08133 O-succinylhomoserine 99.9 1.8E-20 3.9E-25 190.0 29.7 210 145-388 60-277 (390)
267 cd00617 Tnase_like Tryptophana 99.9 1E-19 2.2E-24 184.8 33.7 321 119-467 33-409 (431)
268 PRK07503 methionine gamma-lyas 99.9 5.8E-20 1.3E-24 187.0 31.7 211 146-388 65-283 (403)
269 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.5E-19 3.2E-24 183.6 34.2 311 118-464 10-380 (380)
270 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.7E-20 3.8E-25 189.7 27.0 210 145-388 53-270 (380)
271 PRK06460 hypothetical protein; 99.9 3E-20 6.4E-25 187.5 28.3 284 145-466 44-374 (376)
272 TIGR03801 asp_4_decarbox aspar 99.9 3E-20 6.6E-25 191.9 28.6 276 164-468 157-518 (521)
273 KOG0634 Aromatic amino acid am 99.9 4.7E-20 1E-24 177.7 27.0 312 149-467 103-467 (472)
274 PRK08574 cystathionine gamma-s 99.9 2E-20 4.3E-25 189.2 25.7 210 145-388 52-269 (385)
275 KOG1368 Threonine aldolase [Am 99.9 2.3E-20 5.1E-25 171.1 23.5 314 121-463 35-365 (384)
276 PRK07504 O-succinylhomoserine 99.9 3.9E-20 8.4E-25 188.0 27.3 209 146-388 65-282 (398)
277 PLN02368 alanine transaminase 99.9 5.5E-20 1.2E-24 187.0 28.3 251 149-411 110-401 (407)
278 PRK00451 glycine dehydrogenase 99.9 9E-20 1.9E-24 189.2 30.0 292 142-464 108-446 (447)
279 PRK08247 cystathionine gamma-s 99.9 6.1E-20 1.3E-24 184.9 27.8 283 145-466 51-364 (366)
280 TIGR01788 Glu-decarb-GAD gluta 99.9 2.8E-19 6E-24 182.2 32.7 328 117-467 54-430 (431)
281 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7.2E-19 1.6E-23 178.1 34.7 306 118-464 14-377 (379)
282 PRK07811 cystathionine gamma-s 99.9 9.6E-20 2.1E-24 184.6 28.3 209 146-388 61-278 (388)
283 COG2008 GLY1 Threonine aldolas 99.9 3.7E-20 7.9E-25 176.5 23.2 326 103-464 2-341 (342)
284 PRK07810 O-succinylhomoserine 99.9 1E-19 2.3E-24 184.9 27.2 209 146-388 70-287 (403)
285 PLN02509 cystathionine beta-ly 99.9 2E-19 4.3E-24 184.3 28.1 208 146-388 133-349 (464)
286 COG1103 Archaea-specific pyrid 99.9 2.1E-18 4.6E-23 156.3 31.1 321 118-467 27-381 (382)
287 TIGR01329 cysta_beta_ly_E cyst 99.9 2.1E-19 4.6E-24 181.4 27.6 283 146-467 47-376 (378)
288 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.1E-18 4.5E-23 174.0 34.4 306 118-464 11-375 (376)
289 PRK02769 histidine decarboxyla 99.9 2.1E-18 4.5E-23 173.4 32.6 289 144-466 63-372 (380)
290 PLN03032 serine decarboxylase; 99.9 1.8E-18 4E-23 172.6 31.9 320 110-462 26-372 (374)
291 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.4E-18 7.4E-23 173.0 34.2 305 119-464 12-374 (375)
292 PRK08776 cystathionine gamma-s 99.8 1.5E-18 3.3E-23 176.3 30.6 210 145-388 59-277 (405)
293 PRK07050 cystathionine beta-ly 99.8 5.7E-19 1.2E-23 179.1 27.1 284 145-466 64-391 (394)
294 COG0112 GlyA Glycine/serine hy 99.8 1.3E-18 2.9E-23 166.6 27.8 338 100-468 26-392 (413)
295 PRK09028 cystathionine beta-ly 99.8 6.2E-19 1.4E-23 177.5 27.0 209 146-388 61-277 (394)
296 PRK07049 methionine gamma-lyas 99.8 9.3E-19 2E-23 179.1 28.6 214 146-388 83-311 (427)
297 PRK08114 cystathionine beta-ly 99.8 9.2E-19 2E-23 175.8 26.9 210 145-388 61-280 (395)
298 COG0399 WecE Predicted pyridox 99.8 9.1E-18 2E-22 165.2 32.9 306 118-465 15-372 (374)
299 PRK06084 O-acetylhomoserine am 99.8 1.3E-18 2.8E-23 177.8 28.0 285 146-466 58-422 (425)
300 PRK08064 cystathionine beta-ly 99.8 1.8E-18 3.8E-23 175.5 28.2 281 145-463 53-383 (390)
301 PRK08861 cystathionine gamma-s 99.8 2.2E-18 4.7E-23 173.7 28.5 209 146-388 53-270 (388)
302 PRK08045 cystathionine gamma-s 99.8 2.5E-18 5.4E-23 173.8 29.0 210 145-388 51-269 (386)
303 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.6E-18 1.2E-22 170.7 31.1 302 119-461 6-363 (363)
304 PRK05939 hypothetical protein; 99.8 1.3E-18 2.8E-23 176.4 26.3 211 145-388 46-284 (397)
305 PRK07812 O-acetylhomoserine am 99.8 3.3E-18 7.2E-23 174.7 28.9 286 145-467 68-432 (436)
306 PRK07671 cystathionine beta-ly 99.8 2.7E-18 5.9E-23 173.2 27.4 209 145-388 49-266 (377)
307 PLN02414 glycine dehydrogenase 99.8 4.5E-18 9.8E-23 186.1 30.8 303 142-468 564-909 (993)
308 PRK06176 cystathionine gamma-s 99.8 2.7E-18 5.8E-23 173.3 26.9 284 145-467 49-379 (380)
309 PRK07582 cystathionine gamma-l 99.8 1.1E-17 2.3E-22 168.5 30.5 275 146-461 51-364 (366)
310 TIGR02080 O_succ_thio_ly O-suc 99.8 5.8E-18 1.3E-22 171.0 28.3 210 145-388 50-268 (382)
311 PRK05994 O-acetylhomoserine am 99.8 5.9E-18 1.3E-22 173.3 28.4 211 146-388 63-312 (427)
312 PRK05967 cystathionine beta-ly 99.8 5.3E-18 1.1E-22 170.5 27.4 210 145-388 63-280 (395)
313 PLN02590 probable tyrosine dec 99.8 2.6E-17 5.7E-22 170.8 33.2 345 106-469 129-535 (539)
314 PRK15407 lipopolysaccharide bi 99.8 3.9E-17 8.4E-22 167.6 34.1 286 147-465 64-435 (438)
315 PRK06702 O-acetylhomoserine am 99.8 4.8E-18 1E-22 172.5 27.1 210 145-388 60-310 (432)
316 PRK08248 O-acetylhomoserine am 99.8 3.4E-18 7.4E-23 174.9 26.0 286 145-467 63-428 (431)
317 PLN02271 serine hydroxymethylt 99.8 2.1E-17 4.5E-22 168.3 31.3 335 100-465 148-539 (586)
318 PRK07269 cystathionine gamma-s 99.8 5.3E-18 1.1E-22 170.1 26.5 280 146-464 54-362 (364)
319 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 5.4E-18 1.2E-22 173.5 27.0 210 145-388 56-305 (418)
320 PLN02880 tyrosine decarboxylas 99.8 1.4E-17 2.9E-22 172.9 30.2 344 106-468 81-486 (490)
321 PRK03080 phosphoserine aminotr 99.8 6.5E-18 1.4E-22 171.1 27.2 289 145-468 47-375 (378)
322 TIGR03531 selenium_SpcS O-phos 99.8 9.1E-17 2E-21 163.0 31.4 298 145-463 104-443 (444)
323 PLN02724 Molybdenum cofactor s 99.8 6.6E-17 1.4E-21 177.9 32.7 307 144-466 76-488 (805)
324 PRK04311 selenocysteine syntha 99.8 1.5E-16 3.2E-21 163.2 32.9 326 111-465 93-463 (464)
325 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.8E-17 8.2E-22 163.8 27.2 283 145-465 54-386 (386)
326 PRK08134 O-acetylhomoserine am 99.8 4.7E-17 1E-21 166.5 28.4 211 145-388 63-313 (433)
327 cd00615 Orn_deC_like Ornithine 99.8 3E-18 6.6E-23 167.6 18.1 221 145-387 58-294 (294)
328 TIGR00474 selA seryl-tRNA(sec) 99.8 2.6E-16 5.7E-21 160.9 32.4 321 111-460 88-453 (454)
329 cd00611 PSAT_like Phosphoserin 99.8 2.2E-17 4.8E-22 165.8 24.3 313 112-463 6-353 (355)
330 TIGR01364 serC_1 phosphoserine 99.8 1.1E-16 2.4E-21 159.7 28.2 312 117-466 4-348 (349)
331 PF00464 SHMT: Serine hydroxym 99.8 4.8E-17 1E-21 161.7 25.3 329 100-459 20-398 (399)
332 PRK05613 O-acetylhomoserine am 99.8 4.3E-17 9.4E-22 166.6 25.6 210 145-388 68-322 (437)
333 TIGR03799 NOD_PanD_pyr putativ 99.8 4.6E-16 1E-20 161.8 33.3 340 105-459 87-518 (522)
334 PRK05355 3-phosphoserine/phosp 99.8 1.5E-16 3.2E-21 159.6 28.7 315 112-466 10-358 (360)
335 PRK12566 glycine dehydrogenase 99.8 1.5E-16 3.3E-21 171.0 29.7 299 141-467 538-877 (954)
336 PLN02263 serine decarboxylase 99.8 1.3E-15 2.8E-20 154.3 34.0 290 143-466 130-443 (470)
337 TIGR02618 tyr_phenol_ly tyrosi 99.8 8.4E-16 1.8E-20 153.9 31.8 299 146-467 71-427 (450)
338 PRK15029 arginine decarboxylas 99.8 3.2E-16 6.8E-21 167.3 29.0 304 145-466 204-604 (755)
339 KOG1549 Cysteine desulfurase N 99.8 3.4E-16 7.4E-21 153.2 26.5 334 100-468 44-420 (428)
340 TIGR01366 serC_3 phosphoserine 99.8 1.2E-16 2.7E-21 160.4 24.2 289 145-467 40-361 (361)
341 PRK05367 glycine dehydrogenase 99.8 7.3E-16 1.6E-20 169.7 31.4 299 143-468 539-877 (954)
342 PRK13237 tyrosine phenol-lyase 99.8 4.5E-15 9.7E-20 149.1 33.7 297 148-467 80-434 (460)
343 TIGR00461 gcvP glycine dehydro 99.8 1.2E-15 2.7E-20 165.1 31.6 300 141-468 525-869 (939)
344 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.7E-16 3.7E-21 158.4 21.8 281 145-451 65-416 (417)
345 COG0626 MetC Cystathionine bet 99.7 2.5E-15 5.4E-20 148.9 29.5 287 145-467 62-395 (396)
346 PRK06434 cystathionine gamma-l 99.7 1.2E-15 2.6E-20 153.5 25.5 277 145-465 63-383 (384)
347 COG3977 Alanine-alpha-ketoisov 99.7 4E-15 8.8E-20 137.0 26.1 347 87-467 21-412 (417)
348 KOG2862 Alanine-glyoxylate ami 99.7 3E-14 6.4E-19 132.1 31.5 316 119-466 27-382 (385)
349 COG3844 Kynureninase [Amino ac 99.7 1.1E-14 2.4E-19 135.9 26.1 328 99-467 31-403 (407)
350 PRK15400 lysine decarboxylase 99.7 5.9E-15 1.3E-19 156.0 26.6 295 145-465 194-558 (714)
351 PRK13578 ornithine decarboxyla 99.7 1.2E-14 2.6E-19 153.8 28.2 302 145-466 173-565 (720)
352 COG2873 MET17 O-acetylhomoseri 99.7 1.1E-14 2.4E-19 138.4 24.9 284 146-466 62-425 (426)
353 PRK15399 lysine decarboxylase 99.7 2.8E-14 6.2E-19 150.8 29.6 295 145-465 194-558 (713)
354 KOG0053 Cystathionine beta-lya 99.7 1.3E-14 2.8E-19 141.9 24.4 284 146-467 77-407 (409)
355 cd01494 AAT_I Aspartate aminot 99.7 2.8E-15 6.2E-20 133.7 16.1 161 148-323 2-170 (170)
356 COG0076 GadB Glutamate decarbo 99.6 1.6E-13 3.4E-18 140.5 27.2 267 143-428 98-403 (460)
357 PF01212 Beta_elim_lyase: Beta 99.6 6.6E-16 1.4E-20 149.2 8.9 253 117-396 8-278 (290)
358 PRK05367 glycine dehydrogenase 99.6 3E-13 6.6E-18 149.2 30.0 280 140-461 115-437 (954)
359 PLN02414 glycine dehydrogenase 99.6 3.5E-13 7.5E-18 148.0 29.4 323 102-462 104-465 (993)
360 TIGR01365 serC_2 phosphoserine 99.6 7.8E-13 1.7E-17 132.3 27.8 284 144-465 37-372 (374)
361 PLN02452 phosphoserine transam 99.6 9.4E-13 2E-17 131.6 28.3 324 100-466 6-363 (365)
362 PF00282 Pyridoxal_deC: Pyrido 99.6 5.5E-13 1.2E-17 134.1 25.1 246 145-405 78-372 (373)
363 TIGR02617 tnaA_trp_ase tryptop 99.6 1.6E-12 3.4E-17 129.3 25.3 305 145-467 73-442 (467)
364 COG1982 LdcC Arginine/lysine/o 99.6 7.4E-13 1.6E-17 134.8 23.5 282 147-461 71-403 (557)
365 KOG0633 Histidinol phosphate a 99.5 5.4E-13 1.2E-17 120.8 17.8 283 149-463 72-374 (375)
366 COG1003 GcvP Glycine cleavage 99.5 1.1E-11 2.4E-16 120.4 25.0 299 143-469 106-450 (496)
367 COG1448 TyrB Aspartate/tyrosin 99.5 7.4E-11 1.6E-15 113.6 28.3 323 101-463 27-395 (396)
368 KOG0258 Alanine aminotransfera 99.5 1.2E-11 2.5E-16 118.3 21.4 350 100-471 70-474 (475)
369 TIGR03811 tyr_de_CO2_Ent tyros 99.4 1.9E-10 4E-15 121.2 30.5 288 104-405 79-501 (608)
370 PRK12462 phosphoserine aminotr 99.4 1.2E-10 2.5E-15 115.5 26.7 319 111-466 10-362 (364)
371 PF12897 Aminotran_MocR: Alani 99.4 2.7E-10 5.8E-15 110.0 27.1 308 143-467 66-416 (425)
372 TIGR00461 gcvP glycine dehydro 99.4 2.5E-10 5.4E-15 124.3 29.6 280 140-461 103-426 (939)
373 COG0403 GcvP Glycine cleavage 99.4 1.5E-09 3.3E-14 105.8 28.5 285 141-463 115-447 (450)
374 COG1921 SelA Selenocysteine sy 99.3 1.9E-10 4E-15 112.5 20.6 226 111-359 34-270 (395)
375 KOG2467 Glycine/serine hydroxy 99.3 8.4E-10 1.8E-14 104.9 24.2 322 118-465 54-425 (477)
376 PF02347 GDC-P: Glycine cleava 99.3 1.9E-10 4.2E-15 115.2 20.9 279 140-460 104-429 (429)
377 PF06838 Met_gamma_lyase: Meth 99.3 1.2E-09 2.6E-14 104.9 24.5 251 141-421 48-333 (403)
378 KOG1383 Glutamate decarboxylas 99.3 1.5E-09 3.3E-14 106.6 23.8 327 117-473 93-453 (491)
379 KOG0629 Glutamate decarboxylas 99.2 2.4E-09 5.1E-14 103.9 23.1 303 149-465 144-508 (510)
380 PF05889 SLA_LP_auto_ag: Solub 99.2 7.9E-09 1.7E-13 101.3 25.0 287 157-465 67-389 (389)
381 PF03841 SelA: L-seryl-tRNA se 99.1 1.3E-10 2.8E-15 112.7 7.9 229 111-359 13-260 (367)
382 PRK12566 glycine dehydrogenase 99.1 1.1E-07 2.4E-12 103.4 28.0 279 141-461 119-439 (954)
383 KOG2040 Glycine dehydrogenase 99.0 3.9E-08 8.6E-13 99.8 21.8 299 142-467 578-919 (1001)
384 KOG3846 L-kynurenine hydrolase 99.0 5E-07 1.1E-11 84.4 23.9 333 99-467 65-462 (465)
385 COG3033 TnaA Tryptophanase [Am 98.9 9.7E-07 2.1E-11 84.3 25.2 335 99-467 45-445 (471)
386 KOG0628 Aromatic-L-amino-acid/ 98.9 2.2E-06 4.8E-11 84.5 26.7 298 145-467 108-472 (511)
387 COG4100 Cystathionine beta-lya 98.7 3.3E-06 7.2E-11 78.8 18.9 250 141-421 59-344 (416)
388 COG1932 SerC Phosphoserine ami 98.6 2.2E-05 4.7E-10 76.0 22.5 325 101-467 5-364 (365)
389 KOG1412 Aspartate aminotransfe 98.4 2.8E-05 6.1E-10 73.1 19.1 272 167-469 105-408 (410)
390 PF04864 Alliinase_C: Allinase 98.3 4.3E-05 9.3E-10 73.5 17.3 283 145-462 42-361 (363)
391 KOG1411 Aspartate aminotransfe 98.2 1.8E-05 3.8E-10 75.5 11.9 289 149-465 98-424 (427)
392 KOG2040 Glycine dehydrogenase 98.2 0.00024 5.1E-09 73.1 20.2 276 148-461 165-478 (1001)
393 KOG3843 Predicted serine hydro 96.9 0.043 9.4E-07 50.9 15.1 298 149-470 60-406 (432)
394 KOG2790 Phosphoserine aminotra 96.8 0.3 6.4E-06 46.1 19.3 323 99-466 5-368 (370)
395 PLN02994 1-aminocyclopropane-1 95.8 0.031 6.7E-07 48.8 7.0 48 149-196 95-152 (153)
396 PRK13396 3-deoxy-7-phosphohept 89.1 6.5 0.00014 39.1 12.1 59 216-282 220-283 (352)
397 PRK13397 3-deoxy-7-phosphohept 88.6 9.8 0.00021 36.0 12.4 134 109-282 59-196 (250)
398 PRK12595 bifunctional 3-deoxy- 85.6 14 0.0003 37.1 12.4 59 216-282 237-299 (360)
399 TIGR01361 DAHP_synth_Bsub phos 82.5 23 0.00049 33.8 11.9 93 163-282 110-206 (260)
400 PRK13398 3-deoxy-7-phosphohept 66.0 1.1E+02 0.0025 29.2 12.0 93 163-282 112-208 (266)
401 PRK08673 3-deoxy-7-phosphohept 65.2 1.1E+02 0.0024 30.4 12.0 59 216-282 212-274 (335)
402 PF06506 PrpR_N: Propionate ca 62.7 67 0.0015 28.5 9.3 106 151-277 44-150 (176)
403 COG0133 TrpB Tryptophan syntha 53.9 1.2E+02 0.0026 29.7 9.6 92 154-253 96-195 (396)
404 COG0296 GlgB 1,4-alpha-glucan 53.4 13 0.00028 40.0 3.4 80 249-332 206-286 (628)
405 PF03652 UPF0081: Uncharacteri 48.6 65 0.0014 27.3 6.4 54 215-280 38-98 (135)
406 KOG0352 ATP-dependent DNA heli 47.2 70 0.0015 32.6 7.1 45 237-285 111-157 (641)
407 COG0514 RecQ Superfamily II DN 46.7 4.1E+02 0.0088 28.7 13.9 113 162-290 33-152 (590)
408 PF05368 NmrA: NmrA-like famil 44.2 1.4E+02 0.003 27.5 8.7 91 169-274 7-98 (233)
409 COG1088 RfbB dTDP-D-glucose 4, 43.1 1.9E+02 0.0042 28.2 9.1 121 165-299 3-148 (340)
410 COG2102 Predicted ATPases of P 42.8 2.4E+02 0.0052 26.1 9.4 95 164-274 4-116 (223)
411 PRK07179 hypothetical protein; 42.5 3.8E+02 0.0082 27.1 14.3 41 51-107 29-69 (407)
412 COG1349 GlpR Transcriptional r 42.5 3E+02 0.0066 26.0 10.9 125 149-290 79-217 (253)
413 PRK13028 tryptophan synthase s 41.5 3.7E+02 0.008 27.5 11.7 59 156-214 105-168 (402)
414 COG1066 Sms Predicted ATP-depe 39.8 3.7E+02 0.0081 27.6 10.9 57 207-275 147-215 (456)
415 TIGR01389 recQ ATP-dependent D 39.8 4.5E+02 0.0098 28.3 12.8 18 270-287 128-145 (591)
416 PF10087 DUF2325: Uncharacteri 39.3 1.3E+02 0.0027 23.6 6.4 68 193-277 10-82 (97)
417 TIGR00250 RNAse_H_YqgF RNAse H 38.7 91 0.002 26.2 5.8 53 216-280 36-94 (130)
418 PF06877 RraB: Regulator of ri 38.3 76 0.0016 25.2 5.1 69 403-471 30-99 (104)
419 TIGR00162 conserved hypothetic 37.0 79 0.0017 28.5 5.4 41 240-284 15-57 (188)
420 smart00642 Aamy Alpha-amylase 36.8 25 0.00054 31.0 2.2 27 254-280 67-93 (166)
421 TIGR03586 PseI pseudaminic aci 35.6 4.2E+02 0.0091 26.2 10.7 89 164-282 113-204 (327)
422 PF02603 Hpr_kinase_N: HPr Ser 35.4 38 0.00082 28.4 2.9 33 239-278 81-113 (127)
423 COG0075 Serine-pyruvate aminot 35.4 4.9E+02 0.011 26.4 12.6 129 116-260 32-180 (383)
424 KOG0630 Predicted pyridoxal-de 35.2 5.1E+02 0.011 27.1 11.1 54 216-276 275-329 (838)
425 PRK05638 threonine synthase; V 34.7 2.7E+02 0.0059 28.8 9.8 60 160-220 111-171 (442)
426 COG1911 RPL30 Ribosomal protei 34.1 70 0.0015 25.3 3.9 88 175-280 8-95 (100)
427 PF02571 CbiJ: Precorrin-6x re 33.4 2.8E+02 0.0061 26.2 8.8 96 164-274 2-97 (249)
428 PRK00109 Holliday junction res 32.9 1.2E+02 0.0027 25.7 5.7 53 216-280 42-100 (138)
429 PF13872 AAA_34: P-loop contai 32.6 29 0.00062 33.7 2.0 28 257-284 159-187 (303)
430 PLN03244 alpha-amylase; Provis 32.4 46 0.00099 36.8 3.6 33 254-288 438-470 (872)
431 COG0108 RibB 3,4-dihydroxy-2-b 32.4 1E+02 0.0022 28.0 5.2 34 240-274 156-189 (203)
432 PRK04346 tryptophan synthase s 32.1 5.7E+02 0.012 26.1 13.0 71 156-226 101-179 (397)
433 PF13460 NAD_binding_10: NADH( 31.5 94 0.002 27.2 5.1 79 175-271 12-90 (183)
434 KOG0369 Pyruvate carboxylase [ 30.7 6.6E+02 0.014 27.5 11.4 140 236-459 72-215 (1176)
435 PRK08329 threonine synthase; V 30.7 4.9E+02 0.011 25.9 10.5 56 160-215 103-159 (347)
436 COG2870 RfaE ADP-heptose synth 30.7 1.1E+02 0.0023 31.1 5.5 37 240-279 144-180 (467)
437 COG1087 GalE UDP-glucose 4-epi 30.1 3.5E+02 0.0076 26.5 8.7 95 164-271 2-110 (329)
438 TIGR02035 D_Ser_am_lyase D-ser 29.2 2.7E+02 0.0059 28.8 8.5 62 154-215 145-207 (431)
439 cd06447 D-Ser-dehyd D-Serine d 29.0 3.1E+02 0.0067 28.1 8.8 56 160-215 133-189 (404)
440 COG2089 SpsE Sialic acid synth 29.0 5.8E+02 0.013 25.2 10.5 113 153-271 93-207 (347)
441 COG0352 ThiE Thiamine monophos 28.4 56 0.0012 30.1 3.0 22 259-280 54-75 (211)
442 PF07894 DUF1669: Protein of u 27.8 80 0.0017 30.4 4.0 54 216-280 131-186 (284)
443 COG1504 Uncharacterized conser 27.7 1.2E+02 0.0025 24.7 4.2 45 216-275 50-94 (121)
444 PRK07476 eutB threonine dehydr 27.2 6E+02 0.013 24.9 10.7 52 164-215 70-122 (322)
445 COG1105 FruK Fructose-1-phosph 27.1 5.9E+02 0.013 25.0 9.9 24 257-280 146-169 (310)
446 PF00455 DeoRC: DeoR C termina 26.8 4.2E+02 0.0092 23.0 11.1 47 148-195 6-53 (161)
447 TIGR00614 recQ_fam ATP-depende 26.0 7.6E+02 0.017 25.7 12.0 17 270-286 128-144 (470)
448 PF00926 DHBP_synthase: 3,4-di 25.7 1.6E+02 0.0034 26.8 5.3 35 240-275 152-186 (194)
449 PF04413 Glycos_transf_N: 3-De 25.4 4.9E+02 0.011 23.2 9.5 87 175-280 38-129 (186)
450 KOG3974 Predicted sugar kinase 25.2 1.1E+02 0.0025 28.9 4.4 36 243-278 104-140 (306)
451 PRK13509 transcriptional repre 24.8 5.9E+02 0.013 24.0 9.7 45 148-193 80-124 (251)
452 PF00128 Alpha-amylase: Alpha 24.3 39 0.00084 32.5 1.3 27 254-280 49-75 (316)
453 PRK04452 acetyl-CoA decarbonyl 24.2 6.7E+02 0.015 24.7 9.8 62 171-232 139-201 (319)
454 COG3962 Acetolactate synthase 23.9 2.2E+02 0.0047 29.6 6.3 36 258-293 245-290 (617)
455 cd00984 DnaB_C DnaB helicase C 23.7 1.6E+02 0.0034 27.3 5.3 52 216-275 107-168 (242)
456 PF10678 DUF2492: Protein of u 23.2 1.6E+02 0.0035 22.3 4.1 44 149-192 23-67 (78)
457 PF00106 adh_short: short chai 23.2 3.6E+02 0.0079 22.7 7.3 65 164-228 2-75 (167)
458 TIGR00506 ribB 3,4-dihydroxy-2 23.1 2E+02 0.0044 26.2 5.6 34 240-274 157-190 (199)
459 COG2515 Acd 1-aminocyclopropan 23.0 7.3E+02 0.016 24.3 9.7 112 149-268 50-177 (323)
460 KOG1251 Serine racemase [Signa 22.9 6.6E+02 0.014 23.9 10.0 64 163-226 75-141 (323)
461 TIGR03853 matur_matur probable 22.2 1.8E+02 0.004 22.0 4.2 45 149-193 21-66 (77)
462 COG0825 AccA Acetyl-CoA carbox 22.1 1.5E+02 0.0033 28.5 4.7 118 251-390 126-259 (317)
463 TIGR02402 trehalose_TreZ malto 22.0 75 0.0016 34.0 3.0 34 253-288 156-189 (542)
464 PRK08638 threonine dehydratase 21.8 7E+02 0.015 24.6 9.7 53 163-215 77-130 (333)
465 PRK00083 frr ribosome recyclin 21.7 4.8E+02 0.01 23.4 7.7 61 400-467 64-124 (185)
466 COG0816 Predicted endonuclease 21.6 2.7E+02 0.0059 23.8 5.8 53 216-280 41-99 (141)
467 COG2876 AroA 3-deoxy-D-arabino 21.4 6.6E+02 0.014 24.1 8.6 119 137-282 86-226 (286)
468 TIGR00284 dihydropteroate synt 21.4 5.8E+02 0.013 27.0 9.2 117 149-280 165-290 (499)
469 TIGR00196 yjeF_cterm yjeF C-te 21.3 5.1E+02 0.011 24.6 8.5 20 258-277 107-126 (272)
470 TIGR00496 frr ribosome recycli 21.2 5.2E+02 0.011 23.0 7.7 61 399-466 54-114 (176)
471 PRK13453 F0F1 ATP synthase sub 21.1 1.5E+02 0.0034 26.1 4.4 20 3-22 15-34 (173)
472 PF03796 DnaB_C: DnaB-like hel 21.0 2.5E+02 0.0054 26.5 6.1 53 216-275 113-175 (259)
473 PLN02672 methionine S-methyltr 20.9 6.8E+02 0.015 29.3 10.3 114 149-279 429-566 (1082)
474 PRK00014 ribB 3,4-dihydroxy-2- 20.7 2.3E+02 0.0051 26.4 5.5 33 241-274 173-205 (230)
475 PRK01792 ribB 3,4-dihydroxy-2- 20.7 2.4E+02 0.0052 26.0 5.5 33 241-274 168-200 (214)
476 TIGR02100 glgX_debranch glycog 20.6 76 0.0016 35.0 2.8 38 243-280 231-268 (688)
477 cd00520 RRF Ribosome recycling 20.6 5.5E+02 0.012 22.9 7.8 61 400-467 60-120 (179)
478 PRK11057 ATP-dependent DNA hel 20.5 1.1E+03 0.024 25.5 12.7 17 271-287 141-157 (607)
479 PRK09441 cytoplasmic alpha-amy 20.4 74 0.0016 33.4 2.5 29 252-280 76-104 (479)
480 PRK11633 cell division protein 20.3 2.5E+02 0.0053 26.2 5.6 55 407-463 159-213 (226)
481 PRK05906 lipid A biosynthesis 20.3 9.9E+02 0.021 24.9 11.2 36 240-275 210-253 (454)
482 PF01301 Glyco_hydro_35: Glyco 20.2 1.8E+02 0.0039 28.6 5.1 52 217-276 23-82 (319)
No 1
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.4e-105 Score=759.30 Aligned_cols=477 Identities=62% Similarity=1.024 Sum_probs=462.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc---cCCCCCCcccccChHHHHHHHHHhhhhcccCCCccCCCCC
Q 046230 1 MISIPYLTALTTYFSYGLLFVFGQIRDFFRKIIDWWS---ANNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPISSAPDA 77 (489)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~ 77 (489)
++++||++.+.||++|++||++||+|||++++|.++. +++++||+||+++||+||.||+|+|++|||+|||+++||+
T Consensus 34 ~~~~~~~v~l~ty~~y~~l~~~ghvrd~~~~~f~~~~~~~~~~~~g~~ply~~Fe~FY~Rriy~ri~Dc~~RPi~~VPG~ 113 (519)
T KOG1357|consen 34 EDTIPYLVALATYLSYLLLFVFGHVRDFFGKIFFVKKYKKDNEMDGYAPLYSSFESFYSRRIYRRIRDCFERPICSVPGA 113 (519)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHHhhheehhhhcccccccCccchhhhHHHHHHHHHHHHHhHhhcCCCcCCCCc
Confidence 3689999999999999999999999999999998543 3668999999999999999999999999999999999999
Q ss_pred eEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHH
Q 046230 78 WFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVAR 157 (489)
Q Consensus 78 ~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 157 (489)
+|+.+||.++|+||+|++||+-.++||++|||||||++++..|.+++.+++++|+.+.|+++...|+.+.|.++++.+|+
T Consensus 114 ~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~ 193 (519)
T KOG1357|consen 114 WVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVAR 193 (519)
T ss_pred eEEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCC
Q 046230 158 FVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHR 237 (489)
Q Consensus 158 ~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~ 237 (489)
|+|.+++++|++|+.+|++.+.++.+|+..|++|+.||.|++.|++++||.++.|+|||+.+||++|++++.+|||+||+
T Consensus 194 f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thr 273 (519)
T KOG1357|consen 194 FLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHR 273 (519)
T ss_pred hcCCcceEEEeccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc
Q 046230 238 PWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 238 ~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G 317 (489)
||++++|++|+++||+|+++.|+++++++|||.++|++||+|++|++|++|++++++++++|.++||+||||+|+||+.|
T Consensus 274 p~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G 353 (519)
T KOG1357|consen 274 PWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG 353 (519)
T ss_pred cchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND 397 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 397 (489)
||++++++++|+++..+....|+++++|+++++.+.++++|+++++++.+++.++++++|+++||..|+.+||.++++.+
T Consensus 354 Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~d 433 (519)
T KOG1357|consen 354 GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNND 433 (519)
T ss_pred ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCCCCCC
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYFPAEPR 477 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~~~~~ 477 (489)
+|++|++++.+.+...+.+.|++++|.++.++||++|.-.+++|||.|+.||+|+++++++.++++.+....++.+..+.
T Consensus 434 SpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~~~~~~~~~ 513 (519)
T KOG1357|consen 434 SPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDEDGVKYVLPKPK 513 (519)
T ss_pred CCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchhhcceeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988887776554443
No 2
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1.2e-88 Score=704.41 Aligned_cols=489 Identities=88% Similarity=1.400 Sum_probs=457.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCcccccChHHHHHHHHHhhhhcccCCCccCCCCCeEE
Q 046230 1 MISIPYLTALTTYFSYGLLFVFGQIRDFFRKIIDWWSANNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPISSAPDAWFD 80 (489)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~ 80 (489)
+.+|||+++++||++|+|||++||+|||++++|.+...++++||+||+++||+||+||+|+|++|||+|||+++||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PLN02483 1 MITIPYLTALTTYFSYGLLFAFGQLRDFFRAILDWWKTSNLQGYAPICLGLEDFYIRRLYLRIQDCFNRPIASAPDAWFD 80 (489)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCccccCHHHHHHHHhhhhcccccCCCCCCCCCCeEE
Confidence 35799999999999999999999999999999966555778999999999999999999999999999999999999999
Q ss_pred EeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC
Q 046230 81 VVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG 160 (489)
Q Consensus 81 ~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 160 (489)
++||.++|+||+++++++++++|||+|||||||+++++.+.+++.+++++|+.++++++..+|+.+.+.++|+++|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g 160 (489)
T PLN02483 81 VVERVSNDNNKTLKRTTKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG 160 (489)
T ss_pred EEEeecCCCCceEEecCCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999998788899999999999999999999999999999999999999999
Q ss_pred CCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 161 KPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 161 ~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
.++++++++|+.+|..++.++.++||.|+++.++|.++..+++..|++++.++++|+++|++.|++.+..++|++|+|++
T Consensus 161 ~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 161 KPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred CCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCc
Confidence 99999999999999988999999999999999999999999999999999999999999999999888888999999999
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYI 320 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i 320 (489)
+++|++|++++|+|.+.++++|+++|++||++||+||+|++|.+|++|++.+++++++|.++||+++||||+||+.|||+
T Consensus 241 k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i 320 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYI 320 (489)
T ss_pred eEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEE
Confidence 99999999999999999999999999999999999999999999999999888999988889999999999999989999
Q ss_pred EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCe
Q 046230 321 AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPV 400 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~ 400 (489)
++++++++.++.....+.++++++|+.++++.++|+.++++++.....+++++++++.+++++.|+++|+.+.++.++++
T Consensus 321 ~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~ 400 (489)
T PLN02483 321 AGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPV 400 (489)
T ss_pred EcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCE
Confidence 99999999999877766677778999999999999998654444455677899999999999999999998877777899
Q ss_pred EEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCCCCCCCcc
Q 046230 401 MPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYFPAEPRKQM 480 (489)
Q Consensus 401 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~~~~~~~~ 480 (489)
+++++..+.+..+++++|+++||.+.+.+||++|...+++||++++.||++||++++++|+++++.+++|+++..++.++
T Consensus 401 ~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~~~~~~~~~~~ 480 (489)
T PLN02483 401 MPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGIKYFPAEPKKQE 480 (489)
T ss_pred EEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCceeccCCCCcch
Confidence 99998877777899999999999999999998888888999999999999999999999999999999999999999888
Q ss_pred hHHHhhhcC
Q 046230 481 EEEERMKLE 489 (489)
Q Consensus 481 ~~~~~~~~~ 489 (489)
+++.-++.|
T Consensus 481 ~~~~~~~~~ 489 (489)
T PLN02483 481 QVKKFIKLE 489 (489)
T ss_pred hhhhccccC
Confidence 888877654
No 3
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=5.1e-66 Score=508.69 Aligned_cols=386 Identities=34% Similarity=0.597 Sum_probs=350.7
Q ss_pred ChHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHH
Q 046230 50 GLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLK 129 (489)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~ 129 (489)
.|..++.+.+..+..+++.|.+....+..-.. ..-+|++++||+||||||++.+ |++.+++.++++
T Consensus 2 ~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~-------------~~~~~~~~~nf~SNdYLGLa~~-~~~~~a~~~~~~ 67 (388)
T COG0156 2 DFLSFLRQALQALKAEGLYRGLRALDRRQGLA-------------IRADGRKVLNFCSNDYLGLASH-PELIEAAKAAIR 67 (388)
T ss_pred chHHHHHHHHHHHHhhccccchhhccccCCcc-------------eecCCceeEeeeccCcccccCC-HHHHHHHHHHHH
Confidence 35667777776666666666553333222100 0011799999999999999976 889999999999
Q ss_pred HhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeE
Q 046230 130 KYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATI 209 (489)
Q Consensus 130 ~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~ 209 (489)
+||.+.+++|...|+.+.|.+||++||+|+|.|.+++|+||+.||..++.++++++|+|++|..+|.|++.|++++++++
T Consensus 68 ~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~ 147 (388)
T COG0156 68 RYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEV 147 (388)
T ss_pred HhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 210 RVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
+.|+|||+++||+.|++... .++ ++.+|++|+||||.|+++||++|+++|+||+++|++||+|++|.+|++|+
T Consensus 148 ~~f~HnD~~~Le~~l~~~~~------~~~-~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr 220 (388)
T COG0156 148 RRFKHNDLDHLEALLEEARE------NGA-RRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGR 220 (388)
T ss_pred EEecCCCHHHHHHHHHhhhc------cCC-CceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCc
Confidence 99999999999999988431 123 57899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHH
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQ 369 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (489)
|.++++|+.+.++||++|||||+||..|||++++..++|+++....+++|+++++|..++++.++|+++. ...+
T Consensus 221 G~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~------~~~~ 294 (388)
T COG0156 221 GLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILE------EGPE 294 (388)
T ss_pred cHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH------hCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 5688
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCC
Q 046230 370 KLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHT 449 (489)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t 449 (489)
++++++++..++++.++..++.+ .+..++++|++++++..+.+++..|+++||.+.++.+|++|.+..++|+++++.||
T Consensus 295 ~r~~L~~~~~~~~~~~~~~~~~~-~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht 373 (388)
T COG0156 295 RRERLQELAAFFRSLLKALGLVL-LPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHT 373 (388)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc-CCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCC
Confidence 99999999999998888888876 45679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 046230 450 KEDLIKALEVISRV 463 (489)
Q Consensus 450 ~edid~~l~~l~~~ 463 (489)
++||++++++|.++
T Consensus 374 ~~~I~~l~~~l~~~ 387 (388)
T COG0156 374 EEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999865
No 4
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.1e-58 Score=463.26 Aligned_cols=350 Identities=27% Similarity=0.426 Sum_probs=323.5
Q ss_pred CccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHH
Q 046230 97 NKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSA 176 (489)
Q Consensus 97 ~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ 176 (489)
++++++|||+||||||+.++ |++.+++.+++++||.+.++++...|++..|.+||++||+|+|.|++++++||+.||..
T Consensus 99 ~~~r~~l~FsSndYLGL~~~-p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~ 177 (476)
T PLN02955 99 GRFKKLLLFSGNDYLGLSSH-PTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMA 177 (476)
T ss_pred CCCceEEEeeccCccCCCCC-HHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHH
Confidence 45789999999999999965 89999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhh--------------cCCCCEEEEcCCCchHHHHHHHhc----CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCC
Q 046230 177 ILPVL--------------MRKGSLIISDSLNHNSIVNGARGS----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 177 ~~~al--------------~~~g~~Vl~~~~~h~~~~~~~~~~----g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
++.++ .++++.|+.|..+|.|++.|++++ +++++.|+|||+++|+++|+.. +
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~----------~ 247 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSC----------K 247 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhC----------C
Confidence 88887 357789999999999999999998 6889999999999999999763 1
Q ss_pred CccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcce
Q 046230 239 WKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGG 318 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG 318 (489)
.++++|++|++|||+|.+.||++|.++|++||++||+||+|++|.+|++|+|.++++|+. .++||+++||||+||..||
T Consensus 248 ~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~GG 326 (476)
T PLN02955 248 MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHGG 326 (476)
T ss_pred CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccCc
Confidence 245789999999999999999999999999999999999999999999999999999996 5779999999999999999
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
++++++++++.++..+..++|+++.+|+.++++++++++++. .+.++++++++.++|++. .|+.+ .+
T Consensus 327 fi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~------~~~~r~~L~~n~~~fr~~---~G~~~----~s 393 (476)
T PLN02955 327 FIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK------EKWRRKAIWERVKEFKAL---SGVDI----SS 393 (476)
T ss_pred eeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHh---cCCCC----CC
Confidence 999999999999999999999999999999999999998852 346889999999999984 46654 48
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
|++|+.++++.....++++|+++||++.++.||++|.+..++||++++.||++||++++++|.++.+..+.+.
T Consensus 394 PI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~~~ 466 (476)
T PLN02955 394 PIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTAT 466 (476)
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999999999999999999999999999999999999999999988888765
No 5
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.5e-57 Score=428.11 Aligned_cols=398 Identities=26% Similarity=0.406 Sum_probs=357.5
Q ss_pred ChHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCccccccc-CccceeEecccccccCCCCCCccchHHHHHHH
Q 046230 50 GLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRT-NKVNRCLNLGSYNYLGFAASDEYCTPRVIESL 128 (489)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~-~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l 128 (489)
+||.||...+.++-+|.-.|+ +..++|..+.+.-...+. ...+++-=+|||+|||++.+ |+|.+|+.+.+
T Consensus 128 ~Yd~ff~~~i~kKk~DhsYRv--------Fk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~H-p~V~~A~~~tl 198 (570)
T KOG1360|consen 128 DYDRFFREEIDKKKRDHSYRV--------FKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRH-PEVLDAMHDTL 198 (570)
T ss_pred cHHHHHHHHHHhhhccchhHH--------HHHHhHhhhhccchhhccccccCceEEEecCccccccCC-hHHHHHHHHHH
Confidence 589999999999988866654 445556655433222222 12456666799999999965 89999999999
Q ss_pred HHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc--CCCCEEEEcCCCchHHHHHHHhcC
Q 046230 129 KKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM--RKGSLIISDSLNHNSIVNGARGSG 206 (489)
Q Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~--~~g~~Vl~~~~~h~~~~~~~~~~g 206 (489)
++||.+.+++|+..|++..+.+||+.||++.++|.+++|+|++-||.+.+..+. -||+.|++|+.||.|++.|++.++
T Consensus 199 ~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~ 278 (570)
T KOG1360|consen 199 DRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSR 278 (570)
T ss_pred HHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcC
Confidence 999999999999999999999999999999999999999999999977766665 489999999999999999999999
Q ss_pred CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 207 ~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
++-..|+|||+++|+++|.... +....+|..|+|+||+|.++||++|+++++|||++.++||+|.+|.+|+
T Consensus 279 v~K~IFrHND~~hL~~lL~~~~---------~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~ 349 (570)
T KOG1360|consen 279 VPKHIFRHNDLDHLEQLLQSSP---------KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGP 349 (570)
T ss_pred CcceeeccCCHHHHHHHHHhCC---------CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccC
Confidence 9999999999999999998741 2344578899999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCch
Q 046230 287 TGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSR 366 (489)
Q Consensus 287 ~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~ 366 (489)
.|.|+.+.-|+- ..+||+.||++|+||..||||+++..++|.++....+++|+++.+|..++.++++.+++..+ +
T Consensus 350 rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~----e 424 (570)
T KOG1360|consen 350 RGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSE----E 424 (570)
T ss_pred CCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhh----h
Confidence 999999998885 67899999999999999999999999999999999999999999999999999999999643 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeec
Q 046230 367 GAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICIS 445 (489)
Q Consensus 367 ~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~ 445 (489)
+..++...+++..++++.|.++|++|++.+ +.++|+.+++.....++++.|+++ ||++..+.||+++.|..++||+|+
T Consensus 425 g~~lR~~hqrnv~~~kq~l~~~GiPVi~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT 503 (570)
T KOG1360|consen 425 GRVLRRQHQRNVKYVKQLLMELGIPVIPNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT 503 (570)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCcccCCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC
Confidence 778888899999999999999999998664 899999999999999999999987 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 446 ASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 446 ~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
..||++.++.+++++..+++++++..
T Consensus 504 P~HT~~mm~~lv~~l~~vw~~v~l~~ 529 (570)
T KOG1360|consen 504 PHHTPQMMNILVNALLDVWNEVGLPR 529 (570)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999865
No 6
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-56 Score=404.23 Aligned_cols=353 Identities=29% Similarity=0.518 Sum_probs=326.7
Q ss_pred cccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHH
Q 046230 94 KRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVT 173 (489)
Q Consensus 94 ~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a 173 (489)
+..|..+++||||.|||||++. ||++.+|.++++++||.+..+.++..|+.+.|..||.++|+|.++|++++..+|+.|
T Consensus 61 ~v~G~~k~ilnFcaNnYLGLss-hPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdA 139 (417)
T KOG1359|consen 61 QVKGSDKKILNFCANNYLGLSS-HPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDA 139 (417)
T ss_pred EEeccccceeeecccccccccC-ChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEecccccc
Confidence 3445568999999999999995 599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
|..++.++..|.+.|++|+.||.|++.|+++.. .+.|-|+.+||..+.++-. -+..+|++++++||.
T Consensus 140 Nag~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k---------~r~klv~TDg~FSMD 206 (417)
T KOG1359|consen 140 NAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACK---------MRLKLVVTDGVFSMD 206 (417)
T ss_pred chHHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhh---------heEEEEEecceeccC
Confidence 999999999999999999999999999999865 6778899999988876422 356689999999999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-CcceEEEeCHHHHHHHHh
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCGGYIAGSKELIQYLKY 332 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~GG~i~~~~~~~~~l~~ 332 (489)
|.+.||++|.+|++|||++|++||+|..|.+|.+|+|..+.+|+. .++||+.+|++|++| ..|||+.+++.+++.+++
T Consensus 207 GdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp~~li~llrq 285 (417)
T KOG1359|consen 207 GDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGPKPLISLLRQ 285 (417)
T ss_pred CCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCChhHHHHHHh
Confidence 999999999999999999999999999999999999999999985 678999999999997 557999999999999999
Q ss_pred hCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHH
Q 046230 333 TCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412 (489)
Q Consensus 333 ~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~ 412 (489)
.+.++.|+++.+|.+...+.++++.++ .....+++.+.+.+.|++.++..|+.+.+.. .|+.|+++++...+.
T Consensus 286 r~RpylFSnslppavV~~a~ka~dllm------~s~~~i~~~~a~~qrfr~~me~aGftIsg~~-hPI~pv~lGda~lA~ 358 (417)
T KOG1359|consen 286 RSRPYLFSNSLPPAVVGMAAKAYDLLM------VSSKEIQSRQANTQRFREFMEAAGFTISGAS-HPICPVMLGDARLAS 358 (417)
T ss_pred cCCceeecCCCChhhhhhhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHhcCceecCCC-CCccceecccHHHHH
Confidence 999999999999999999999999887 4567888999999999999999999987654 799999999999999
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.++++|+++||+|..+.||.+|.++.++|+.+|++||+||||++++++.++.+..+
T Consensus 359 ~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 359 KMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred HHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999887654
No 7
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.7e-52 Score=431.89 Aligned_cols=373 Identities=28% Similarity=0.464 Sum_probs=328.9
Q ss_pred CccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHH
Q 046230 70 PISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHN 149 (489)
Q Consensus 70 ~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (489)
++.+++|++++ ++ |+++|||+|++|+|+.. ||++.+++.+++++||.++++++..+|+++.+.
T Consensus 95 ~~~~~~G~~i~-~~---------------G~~~id~~s~~~lgl~~-~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~ 157 (481)
T PLN02822 95 VLESAAGPHTI-IN---------------GKDVVNFASANYLGLIG-NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHL 157 (481)
T ss_pred ceecCCCCeEE-EC---------------CceEEEeECCCcCCCCC-CHHHHHHHHHHHHHhCCCCcccCccccCHHHHH
Confidence 56778899988 67 99999999999999996 589999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHh
Q 046230 150 ELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIA 229 (489)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~ 229 (489)
+|+++||++++.++++++++|+.++.++++++++++|.|+++..+|.++..++.+++++++.++|||+++|+..+++...
T Consensus 158 ~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~ 237 (481)
T PLN02822 158 DCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTA 237 (481)
T ss_pred HHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999998876422
Q ss_pred cCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccc
Q 046230 230 EGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF 309 (489)
Q Consensus 230 ~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~ 309 (489)
... ..+..+++|++|++++++|.+.|+++|+++|++||++||+||+|++|.+|++|+++++++++.+.++||+++||
T Consensus 238 ~~~---~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~ 314 (481)
T PLN02822 238 ENK---RKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAM 314 (481)
T ss_pred hhc---ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecc
Confidence 110 00123478999999999999999999999999999999999999999999999998899999666779999999
Q ss_pred ccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 046230 310 TKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM- 388 (489)
Q Consensus 310 sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (489)
||++|+.|||++++++++++++...++++|+.+.+|..+++++++|+.+. ..++.++++++++++|++.|+++
T Consensus 315 sKalg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~------~~~~~~~~l~~~~~~l~~~L~~~~ 388 (481)
T PLN02822 315 GHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE------DNPSVLAKLKENIALLHKGLSDIP 388 (481)
T ss_pred hhhhhhCCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999989999999999999998888888887788999999999999873 23678899999999999999997
Q ss_pred CCeeeCCCCCCeEEEEeCCCC--------cHHHHHHHHh-hCCceEEeecCCCcCC--CCCeEEEeecCCCCHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYNPA--------KIPAFSRECL-RQNVAVVTVAFPATPL--LLARARICISASHTKEDLIKAL 457 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~l~-~~Gi~v~~~~~p~~~~--~~~~iRi~~~~~~t~edid~~l 457 (489)
|+.+..+..++++++.+.... ...+++++|+ ++||++.+..+|..+. ....+|+++++.||++||++++
T Consensus 389 g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~ 468 (481)
T PLN02822 389 GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKAS 468 (481)
T ss_pred CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHH
Confidence 888877778999999886421 1357999998 7799999887776532 2457999999999999999999
Q ss_pred HHHHHHHHHhC
Q 046230 458 EVISRVGDLVG 468 (489)
Q Consensus 458 ~~l~~~~~~~~ 468 (489)
++|++++..+.
T Consensus 469 ~~l~~~~~~~~ 479 (481)
T PLN02822 469 ESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 8
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=7.9e-49 Score=401.20 Aligned_cols=353 Identities=31% Similarity=0.509 Sum_probs=307.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
++++|||+||||||+..+ |+|.+++.+++++++.+.++++..+|.++.+.+++++||+++|.+++++++||+++|..++
T Consensus 44 ~~~~~~~~sn~ylgl~~~-p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQH-PAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred CccEEEeecccccCCCCC-HHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 589999999999999965 8999999999999998888888888888899999999999999999999999999998888
Q ss_pred hhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 179 PVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 179 ~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
.++.. +++.|+++..+|+++..+++..|++++.++++|++++++.++.. . +.+..+|+++++++++|.+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~-~--------~~~~~~v~~~~v~~~~G~~ 193 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDL-D--------PHRPKLVAFESVYSMDGDI 193 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhc-c--------CCCCEEEEEcCCCCCCCch
Confidence 87655 78999999999999999999999999999999999999988642 0 1245688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCC
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~ 336 (489)
.|+++|.++|+++|+++|+||+|++|.+|++|.+..++.++. .++||+++||||++|..|||+++++++++.++.....
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~ 272 (406)
T PRK13393 194 APIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASG 272 (406)
T ss_pred hCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcC
Confidence 999999999999999999999999999999998866777775 3458999999999998899999999999999887776
Q ss_pred cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
+.++++.+|+.++++.++|+.+.. . ...+++++++++++++.|+++|+++. +..++++++.+.++....++.+
T Consensus 273 ~~~t~~~~p~~~aa~~aaL~~~~~-----~-~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~i~~v~~~~~~~~~~l~~ 345 (406)
T PRK13393 273 FIFTTSLPPAVAAGALASVRHLKA-----S-SAERERHQDRVARLRARLDKAGIPHL-PNPSHIVPVMVGDPVLCKQISD 345 (406)
T ss_pred ceecCccCHHHHHHHHHHHHHHhh-----C-HHHHHHHHHHHHHHHHHHHHcCCCcC-CCCCCeEEEEeCCHHHHHHHHH
Confidence 667777999999999999998732 1 23456778999999999999888765 3457788887654445678999
Q ss_pred HHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 417 ECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 417 ~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.|+++ ||.+.+..+|++|.+.+++||++++.+|++|+|+++++|++++++++.
T Consensus 346 ~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~~ 399 (406)
T PRK13393 346 ELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLGL 399 (406)
T ss_pred HHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 99985 999999999988888889999999999999999999999999887654
No 9
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-50 Score=386.79 Aligned_cols=346 Identities=18% Similarity=0.235 Sum_probs=296.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||.+ |++|||| ++.....++|+||.+++|+.+|+++..+.+... .
T Consensus 23 ~~~~~~~~G~G~~v~D~~---------------G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~-----~ 82 (404)
T COG4992 23 RLPVVIVRGEGAYVWDQQ---------------GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF-----Y 82 (404)
T ss_pred cCceeEEeccccEEECCC---------------CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc-----C
Confidence 345678899999999999 9999999 556888899999999999999999966544221 3
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhhh---cC---CCCEEEEcCCCchHHHHHHHhcCC----------
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPVL---MR---KGSLIISDSLNHNSIVNGARGSGA---------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~al---~~---~g~~Vl~~~~~h~~~~~~~~~~g~---------- 207 (489)
++...+|.++|++..+ .+.+++.+||++||.++++.. .. +..+|.+.+..|+.+...+..++-
T Consensus 83 ~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl 162 (404)
T COG4992 83 NEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPL 162 (404)
T ss_pred ChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCC
Confidence 6778999999999997 778888899999997776654 33 447788899999988766655442
Q ss_pred --eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccc
Q 046230 208 --TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSI 281 (489)
Q Consensus 208 --~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~ 281 (489)
.+..+|+||++++++++.+ ++++||+|||++..|.+.+ |+++++||++||++||+||+|+
T Consensus 163 ~~g~~~vpfnDi~al~~ai~~-------------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt- 228 (404)
T COG4992 163 LPGFRHVPFNDIEALEAAIDE-------------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT- 228 (404)
T ss_pred CCCceecCCCCHHHHHHHhcc-------------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-
Confidence 3456788999999999986 7899999999999988754 9999999999999999999999
Q ss_pred ccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHH
Q 046230 282 GAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKV 357 (489)
Q Consensus 282 g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (489)
++||||+. +++++|+.| ||+ |++|++|+ | |+++.++.+.+.+....|+.+|+ +||++||++.++|++
T Consensus 229 -G~GRTGk~fA~e~~gV~P---DI~--tlaK~LgG-G~PigA~la~~~~~~~~~~G~HgSTfG--GNpLacAv~~a~l~~ 299 (404)
T COG4992 229 -GLGRTGKLFAYEHYGVEP---DIL--TLAKALGG-GFPIGAMLATEEIASAFTPGDHGSTFG--GNPLACAVALAVLEV 299 (404)
T ss_pred -CCCccchHHHHHHhCCCC---CEE--EeeccccC-CccceeeEEchhhhhcCCCCcccCCCC--cCHHHHHHHHHHHHH
Confidence 99999998 899999999 999 99999998 7 88888877788898889998888 999999999999999
Q ss_pred HHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc
Q 046230 358 ILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT 433 (489)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~ 433 (489)
+ ..+++.+++++++++|+++|+++ .++++. ...+.++++.+..+.....+.+.|.++|+++.+
T Consensus 300 l-------~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~------ 366 (404)
T COG4992 300 L-------LEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLP------ 366 (404)
T ss_pred H-------cchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEec------
Confidence 9 66899999999999999999998 443333 344777888887766788999999999999983
Q ss_pred CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 434 PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 434 ~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.+++||.||+.+|++++++++++|+++++...
T Consensus 367 -a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 367 -AGPNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred -CCCCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4457999999999999999999999999998764
No 10
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=9.6e-49 Score=400.37 Aligned_cols=353 Identities=32% Similarity=0.521 Sum_probs=308.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|++++||+||||||++.+ |++.+|+.+++++|+.+.++++..+|.++.+.+|++++|+++|.+++++++||+++|..++
T Consensus 44 ~~~~~~~~sn~ylgl~~~-p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQH-PEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred CeeEEEeEccCcCCCCCC-HHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 589999999999999975 8999999999999998888888888889999999999999999999999999999998888
Q ss_pred hhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 179 PVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 179 ~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
..+.. +++.|+.+..+|+++..++...|+++..++++|+++++++++.. . +..+.+|+++++++++|.+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~-~--------~~~~~~v~~e~~~~~~G~~ 193 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSV-D--------PNRPKIIAFESVYSMDGDI 193 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhc-c--------CCCCeEEEEcCCCCCCCCc
Confidence 87764 78899999999999999999999998889999999999988742 0 1245688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCC
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~ 336 (489)
.|+++|+++|++||++||+||+|++|.+|+.|.+..+..++. .++||+++||||+||+.|||+++++++++.++.....
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~ 272 (402)
T TIGR01821 194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPG 272 (402)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcC
Confidence 999999999999999999999999999999988866666663 3458999999999998899999999999999877766
Q ss_pred cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
+.|+++.+|..+++++++|+.+.. .+.+.++++++.+++++.|+++|+++.++ .++++++.+..+....++.+
T Consensus 273 ~~~t~~~~~~~~aaa~aaL~~~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i~~i~~~~~~~a~~~~~ 345 (402)
T TIGR01821 273 FIFTTSLPPAIAAGATASIRHLKE------SQDLRRAHQENVKRLKNLLEALGIPVIPN-PSHIVPVIIGDAALCKKVSD 345 (402)
T ss_pred ceecCcCCHHHHHHHHHHHHHhhc------CHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHH
Confidence 677778999999999999998842 25566777899999999999999887654 57788887654444668899
Q ss_pred HHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 417 ECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 417 ~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.|+++ ||.+.+..+|++|.+.+++||++++.+|++|+++++++|++++++++.
T Consensus 346 ~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~ 399 (402)
T TIGR01821 346 LLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL 399 (402)
T ss_pred HHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 98754 999999899988888889999999999999999999999999988765
No 11
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=3.6e-48 Score=396.86 Aligned_cols=355 Identities=32% Similarity=0.522 Sum_probs=308.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|++++||+||||||++.+ |++.+++.+++++++.+.++++..+|.++.+.+|+++||+++|.++++++++|+++|..++
T Consensus 45 ~~~~~~~~s~dylgl~~~-p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai 123 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQH-PKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATL 123 (407)
T ss_pred CceEEEEECCCCcCCCCC-HHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHH
Confidence 689999999999999975 8999999999999998888888888889999999999999999999999999999998878
Q ss_pred hhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 179 PVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 179 ~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
..+.. ++++|+.+..+|.+...+++..++++..++++|+++|+++++.. . +.+..+|+++++++++|.+
T Consensus 124 ~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~--------~~~~~~v~~~~v~s~~G~~ 194 (407)
T PRK09064 124 STLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAA-D--------PDRPKLIAFESVYSMDGDI 194 (407)
T ss_pred HHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhc-c--------CCCCeEEEEeCCCCCCccc
Confidence 77654 78899999999999999999999999899999999999988742 0 1245688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCC
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~ 336 (489)
.|+++|.++|++||++||+||+|++|.+|++|.+..++.++. .++||+++||||+||+.|||+++++++++.+.....+
T Consensus 195 ~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~ 273 (407)
T PRK09064 195 APIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPG 273 (407)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCcc
Confidence 999999999999999999999999888999998876677763 3459999999999999899999999999998877666
Q ss_pred cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
+.++++.+|..+++++++|+.+.. .+..++++.++++++++.|+++|+++.++ .++++++.+.......++.+
T Consensus 274 ~~~t~~~~~~~~~aa~~al~~~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~iv~i~~~~~~~~~~l~~ 346 (407)
T PRK09064 274 FIFTTSLPPAIAAAALASIRHLKE------SNEERERHQERAAKLKAALDAAGIPVMPN-ESHIVPVMVGDPEKCKKASD 346 (407)
T ss_pred ccccCcCCHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHH
Confidence 666777999999999999998842 24457889999999999999999887653 47778887765445678999
Q ss_pred HHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 417 ECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 417 ~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
+|++ +||.+.+..+|++|.+.+++||++++.+|++|+++++++|++++++++.++
T Consensus 347 ~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~~~~ 402 (407)
T PRK09064 347 MLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLGLPR 402 (407)
T ss_pred HHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 9876 499999988888887778999999999999999999999999998887654
No 12
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=3.4e-48 Score=392.88 Aligned_cols=361 Identities=27% Similarity=0.439 Sum_probs=308.1
Q ss_pred EecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc
Q 046230 103 LNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM 182 (489)
Q Consensus 103 id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~ 182 (489)
|||+||||||++.+ |++.+++.+++++||.++++++..+|....+.+||+++|+++|.++++++++|+.++..++.++.
T Consensus 1 ~~f~s~dyLgl~~~-~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~ 79 (392)
T PLN03227 1 LNFATHDFLSTSSS-PTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFA 79 (392)
T ss_pred CCCcCcCccCCCCC-HHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhC
Confidence 68999999999965 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCC-CCCCCCccEEEEEcCcCCCCCCCCChHH
Q 046230 183 RKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQP-RTHRPWKKIMVIVEGIYSMEGELCKFPE 261 (489)
Q Consensus 183 ~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~-~~~~~~~~~~vive~v~s~~G~~~~l~~ 261 (489)
++||.|+++...|+++..++.+.++.+..++|+|++++++.++....+... +.....++.+|++|++++++|.+.|+++
T Consensus 80 ~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~ 159 (392)
T PLN03227 80 KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKE 159 (392)
T ss_pred CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHH
Confidence 999999999999999999999999999999999999998877653211000 0000124568889999999999999999
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccc
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYA 340 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~ 340 (489)
|+++|++||+++|+||+|++|.+|++|++.++++|+.| .++||++.|+||++|+.||++++++++++.++...+.++|+
T Consensus 160 i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~ 239 (392)
T PLN03227 160 LVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFS 239 (392)
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCcccc
Confidence 99999999999999999999999999999999999976 67899999999999988999999999999888777777888
Q ss_pred cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee----------eCCCCCCeEEEEeCCCCc
Q 046230 341 TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV----------LGDNDSPVMPIMLYNPAK 410 (489)
Q Consensus 341 ~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v----------~~~~~~~~~~~~~~~~~~ 410 (489)
.+.+|..+++++++++.+. ..+++++++++++++|++.|++.+++. .....++++++.+.+...
T Consensus 240 ~~~~p~~~~aa~~al~~~~------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~ 313 (392)
T PLN03227 240 ASAPPFLAKADATATAGEL------AGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEA 313 (392)
T ss_pred CCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHH
Confidence 7778988888888876542 356789999999999999998765542 223457889999865322
Q ss_pred ---------HHHHHHHHhhCCceEEeec------CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccC
Q 046230 411 ---------IPAFSRECLRQNVAVVTVA------FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYF 472 (489)
Q Consensus 411 ---------~~~~~~~l~~~Gi~v~~~~------~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~ 472 (489)
..++++.|+++|+++.+.+ +|.+| ...+|+++++.||+||||+++++|+++++++..|+-
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P--~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~~~~~ 388 (392)
T PLN03227 314 TRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVP--PPCLRVVANASHTREDIDKLLTVLGEAVEAILCKII 388 (392)
T ss_pred hhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCC--CceEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2488999999999997532 34555 378999999999999999999999999998866653
No 13
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-47 Score=376.24 Aligned_cols=353 Identities=18% Similarity=0.221 Sum_probs=290.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||+| ||+||||.|. +.++++|+||.|++|+.+|++++.+..... ..
T Consensus 37 ~~p~~~~ra~G~~l~Dvd---------------G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~----~~ 97 (447)
T COG0160 37 RFPLVIVRAEGAYLYDVD---------------GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD----LY 97 (447)
T ss_pred cCcceEEecccCEEEeCC---------------CCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc----cc
Confidence 678889999999999999 9999999654 889999999999999999999977543222 22
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhH---hhhcCCCCEEEEcCCCchHHHHHHHhcCCe----------
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAIL---PVLMRKGSLIISDSLNHNSIVNGARGSGAT---------- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~---~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~---------- 208 (489)
.+...++.++|.+.++. ..+++.+||++||..++ ++.+++..+|.+...+|+.+...+.+++..
T Consensus 98 ~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~ 177 (447)
T COG0160 98 YEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPL 177 (447)
T ss_pred chhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCC
Confidence 47778999999998875 35666699999995544 456788899999999999999888887532
Q ss_pred ---EEEecCC----C-------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHH
Q 046230 209 ---IRVFQHN----T-------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIA 264 (489)
Q Consensus 209 ---~~~~~~~----d-------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~ 264 (489)
+..+|.. + .+.+|+.+.... ..+.+.+++|+|++++..|.+.| |++|++
T Consensus 178 ~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~-------~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~ 250 (447)
T COG0160 178 PPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLE-------VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRK 250 (447)
T ss_pred CCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhc-------CCCCceeEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 2223322 1 123344333321 23568999999999999998865 999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccc
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYA 340 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~ 340 (489)
+|+|||+++|+||||+ +|||||++ +++++|+.| ||+ |++|++|+ | |.+++++++++ +....+.++|+
T Consensus 251 ~~~~~gillI~DEVQt--G~GRTG~~fa~E~~gv~P---Div--t~aK~ig~-G~Pl~avv~r~ei~~-~~~g~~~~Tf~ 321 (447)
T COG0160 251 LCREHGILLIADEVQT--GFGRTGKMFAFEHFGVEP---DIV--TLAKSLGG-GLPLSAVVGRAEIMD-WPPGGHGGTFG 321 (447)
T ss_pred HHHHcCCEEEEecccc--CCCccccchhhhhcCCCC---CEE--EecccccC-CCceeEEeccHHhcc-cCCcccCCCCC
Confidence 9999999999999999 99999998 899999999 999 99999998 8 99999999999 77777777766
Q ss_pred cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCC--CeEEEEeCCC--------
Q 046230 341 TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDNDS--PVMPIMLYNP-------- 408 (489)
Q Consensus 341 ~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~--~~~~~~~~~~-------- 408 (489)
+||++||+++++|++| +.++++++..+.+++++++|.++ .++.+++.++ .++.+.+-.+
T Consensus 322 --GNpva~Aaa~AvL~vi-------e~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~ 392 (447)
T COG0160 322 --GNPVACAAALAVLDVI-------EEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDA 392 (447)
T ss_pred --cCHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCH
Confidence 9999999999999999 66799999999999999999987 6667777664 5666666532
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....++++|+++|+++... ....+++||.||+.+|++++|+++++|+++++++
T Consensus 393 ~~~~~i~~~~~~~Glil~~~-----G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 393 ELAAKIVARAFERGLLLLTC-----GPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHHcCCEEecc-----CCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 24558999999999988832 2336899999999999999999999999998764
No 14
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.4e-46 Score=380.36 Aligned_cols=353 Identities=29% Similarity=0.511 Sum_probs=305.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|+++++|+||||++++.+ |.+.+++.+++++++.+.++++..+|..+.+.+|+++||+++|.+++++++||+++|..++
T Consensus 45 ~~~~~~~~sn~yl~l~~~-p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i 123 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQH-PDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL 123 (410)
T ss_pred CceEEEEECCCccCCCCC-HHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence 688999999999999965 8999999999999998888888888888889999999999999999999999999997777
Q ss_pred hhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 179 PVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 179 ~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
..+.. +++.|+++..+|+++..+++..|+++..++++|.+++++.++... ..++.+|++++++|++|.+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~---------~~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVD---------PDRPKLIAFESVYSMDGDI 194 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcc---------CCCCEEEEEeCCCCCCccc
Confidence 76653 789999999999999999999999998899999999988886531 1245688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCC
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~ 336 (489)
.|+++|.++|++||+++|+||+|++|.+|++|.+..+..++. +++|++++||||+||.+|||+++++++++.++....+
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~ 273 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPG 273 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcc
Confidence 999999999999999999999999998898888765555653 3458999999999999899999999999998887777
Q ss_pred cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
+.++++++|+.++++.++|+.+. .....+++++++.+++++.|+++|+++.. ..++++++++..+....++++
T Consensus 274 ~~~s~~~~~~~~~a~~aaL~~~~------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~i~~~~~~~~~~~~~ 346 (410)
T PRK13392 274 FIFTTALPPAVAAGATAAIRHLK------TSQTERDAHQDRVAALKAKLNANGIPVMP-SPSHIVPVMVGDPTLCKAISD 346 (410)
T ss_pred hhccCcCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCEEEEEeCCHHHHHHHHH
Confidence 66777788999999999999873 22345678899999999999999988754 456777777765445668999
Q ss_pred HHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 417 ECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 417 ~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
+|+ ++||.+.+..+|.+|.+..++|+++++.+|++|+++++++|+++.++++.
T Consensus 347 ~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~~ 400 (410)
T PRK13392 347 RLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLEL 400 (410)
T ss_pred HHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 997 57999999888888878889999999999999999999999999988876
No 15
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-45 Score=373.07 Aligned_cols=385 Identities=22% Similarity=0.367 Sum_probs=317.7
Q ss_pred hHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHH
Q 046230 51 LEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKK 130 (489)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~ 130 (489)
+-.|.+.|+...+++.+... -.|..+.... ++|++++||+|++|||+.+ ||++.+++.+++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------------~~g~~~~~~~~~~YL~l~~-~p~v~~a~~~~~~~ 83 (407)
T PRK07179 21 LPDFIEERLDKYIEERVNKN---WNGKHLVLGK-------------TPGPDAIILQSNDYLNLSG-HPDIIKAQIAALQE 83 (407)
T ss_pred CcHHHHHHHHHHHHHhhccC---cCCceEEeec-------------CCCCcEEEeecCCccCCCC-CHHHHHHHHHHHHH
Confidence 34577777766666543321 1233333321 3378899999999999996 48999999999999
Q ss_pred hCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEE
Q 046230 131 YSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIR 210 (489)
Q Consensus 131 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~ 210 (489)
++.+...++...+..+.+.+|+++||+++|.+.++++++|++||..+++++..+|+.|+++...|.++..+++..|+++.
T Consensus 84 ~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~ 163 (407)
T PRK07179 84 EGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAH 163 (407)
T ss_pred hCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEE
Confidence 87655434444444568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
.++++|+++|++++++ ..+.+|+++++++++|.+.|+++|.++|++||++||+||+|++|.+|++|++
T Consensus 164 ~~~~~d~~~l~~~l~~------------~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g 231 (407)
T PRK07179 164 PFRHNDVDHLRRQIER------------HGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAG 231 (407)
T ss_pred EecCCCHHHHHHHHHh------------cCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCc
Confidence 9999999999998865 2356888999999999999999999999999999999999998888999988
Q ss_pred cccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
....+++. ..+|++++|++|++|+.+|++++++++++.+........++++.++..++++.++++.+. ..+++
T Consensus 232 ~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~------~~~~~ 304 (407)
T PRK07179 232 LVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIE------SADDR 304 (407)
T ss_pred hHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHh------cCHHH
Confidence 66667764 356999999999999867999999999888876655555666677888888888898873 33568
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCH
Q 046230 371 LARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTK 450 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~ 450 (489)
+++++++.+++++.|+++|+.+.+ .++++++.+........+.+.|.++||.+..+.+|..+.+.+.+||+++..+|+
T Consensus 305 ~~~l~~~~~~l~~~L~~~g~~v~~--~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~ 382 (407)
T PRK07179 305 RARLHANARFLREGLSELGYNIRS--ESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTA 382 (407)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCC--CCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCH
Confidence 899999999999999999887763 467888876544455678889999999977777777776778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccCC
Q 046230 451 EDLIKALEVISRVGDLVGIKYFP 473 (489)
Q Consensus 451 edid~~l~~l~~~~~~~~~~~~~ 473 (489)
+|+++++++|++++++..+.+-+
T Consensus 383 edi~~~~~~l~~~~~~~~~~~~~ 405 (407)
T PRK07179 383 SDLDRVLEVCREARDEVDLWFWK 405 (407)
T ss_pred HHHHHHHHHHHHHHHhhCCCcCC
Confidence 99999999999999998877643
No 16
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=8.9e-45 Score=370.39 Aligned_cols=373 Identities=31% Similarity=0.519 Sum_probs=317.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
+.++++.+++|.++++.+ |+++|||++++|+|++.+ |++++++.+++++++.+.++++...|..
T Consensus 19 ~~~~~~~~~~~~~~~~~~---------------g~~~i~~~~~~~lg~~~~-~~v~~~~~~~~~~~~~~~~~s~~~~G~~ 82 (393)
T TIGR01822 19 KSERIITSPQGADIRVAD---------------GREVLNFCANNYLGLSSH-PDLIQAAKDALDEHGFGMSSVRFICGTQ 82 (393)
T ss_pred CcccccccCCCceEEecC---------------CceEEEeeCCCccccCCC-HHHHHHHHHHHHHhCCCCCCcCcccCCh
Confidence 456788999999999877 999999999999999965 8999999999999888777888888888
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
+.+.++++.+|+++|.++++++++|++++..++.++.++||.|+++.++|+++..++++.++..+.+.++|+++|++.++
T Consensus 83 ~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~ 162 (393)
T TIGR01822 83 DIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLK 162 (393)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHH
Confidence 89999999999999999999999999999888888999999999999999999999999888888888999999999998
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIM 305 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~ 305 (489)
+.... ..++.+|+++++++++|.+.|+++|+++|++||++||+||+|++|.++.+|.+..+..++. .++|++
T Consensus 163 ~~~~~-------~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~ 234 (393)
T TIGR01822 163 EARAA-------GARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDII 234 (393)
T ss_pred hhhhc-------CCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEE
Confidence 64211 1145688889999999999999999999999999999999999888888887765566664 356999
Q ss_pred EcccccccCC-cceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 306 MGTFTKSFGS-CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 306 ~~t~sK~~g~-~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
++|+||++++ .|||+++++++++.+......+.++++.++..++++.++|+.+. ..++.+++++++.+++++.
T Consensus 235 ~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~ 308 (393)
T TIGR01822 235 TGTLGKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE------ASNELRDRLWANTRYFRER 308 (393)
T ss_pred EEEChHHhhCCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHH
Confidence 9999999964 35999999999999877555556666677877888888988763 2467788999999999999
Q ss_pred HHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 385 L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
|++.|+.+.++ .++++++.+.......++++.|+++||.+....||..+.+..++|++++..+|++||++++++|.+++
T Consensus 309 L~~~g~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 309 MEAAGFDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred HHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 99888876533 46677776654445678999999999999877777666666789999999999999999999999998
Q ss_pred HHhCC
Q 046230 465 DLVGI 469 (489)
Q Consensus 465 ~~~~~ 469 (489)
++++.
T Consensus 388 ~~~~~ 392 (393)
T TIGR01822 388 RELGV 392 (393)
T ss_pred HHhCC
Confidence 87764
No 17
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=1e-43 Score=363.02 Aligned_cols=374 Identities=21% Similarity=0.330 Sum_probs=290.9
Q ss_pred HHHHHHHHhhhhcccCCCc---------cCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHH
Q 046230 53 DFYIRRLYLRIQDCFGRPI---------SSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPR 123 (489)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~i---------~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a 123 (489)
-+++++.+.|.++||.+|+ .+++|+++||.| |++||||+|++|+|+ ++||++.+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~---------------g~~~ld~~s~~~lgl-~~~p~v~~A 68 (402)
T PRK07505 5 YRNNKKRINRAEKFWDAAYDEGLNGLTVGEREGILITLAD---------------GHTFVNFVSCSYLGL-DTHPAIIEG 68 (402)
T ss_pred hHHHHHHHHhhHHHHHHHHhcccccceeeccCCccEEecC---------------CceEEEeecCCccCC-CCCHHHHHH
Confidence 3678888889999998765 677899999999 999999999999998 678999999
Q ss_pred HHHHHHHhC-CCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc------CCCCEEEEcCCCch
Q 046230 124 VIESLKKYS-PSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM------RKGSLIISDSLNHN 196 (489)
Q Consensus 124 ~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~------~~g~~Vl~~~~~h~ 196 (489)
+.+++++++ .+.++++.. ..++.+.+++++|+++++. ++++++||++++..+++.+. +++++|+.+..+|+
T Consensus 69 ~~~~l~~~g~~~~~~~~~~-~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~ 146 (402)
T PRK07505 69 AVDALKRTGSLHLSSSRTR-VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHA 146 (402)
T ss_pred HHHHHHHhCCCCCCccchh-hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhH
Confidence 999999987 343333322 2467889999999999998 88999999999976665432 35567888889999
Q ss_pred HHHH--HHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 197 SIVN--GARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 197 ~~~~--~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
++.. +....+..++.++++|+++|++++.. ..++++++++++ ++|.+.++++|.++|++||++||
T Consensus 147 s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~------------~~~~~vl~~p~~-~~G~~~~~~~i~~l~~~~~~~li 213 (402)
T PRK07505 147 SLNILKGICADETEVETIDHNDLDALEDICKT------------NKTVAYVADGVY-SMGGIAPVKELLRLQEKYGLFLY 213 (402)
T ss_pred hHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhc------------CCCEEEEEeccc-ccCCcCCHHHHHHHHHHcCCEEE
Confidence 8642 33435678888999999999998854 357788889886 56889999999999999999999
Q ss_pred EEcccccccccCCCCc-cccccCC-CCCCccEEEcccccccCCcceEEE-eCHHHHHHHHhhCCCcccccCCCHHHHHHH
Q 046230 275 LDEAHSIGAVGKTGRG-VCELLEV-DTADVDIMMGTFTKSFGSCGGYIA-GSKELIQYLKYTCPAHLYATSISPPAAEQI 351 (489)
Q Consensus 275 ~DEa~s~g~~g~~G~~-~~~~~~v-~p~~~Di~~~t~sK~~g~~GG~i~-~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~ 351 (489)
+||+|+++++|++|.+ ..+++++ .| +.+++++||||++|++||+++ .++++++.+....++++|+.+.+++.++++
T Consensus 214 ~DEa~~~~~~g~~g~~~~~~~~~~~~~-d~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~ 292 (402)
T PRK07505 214 IDDAHGLSIYGKNGEGYVRSELDYRLN-ERTIIAASLGKAFGASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAI 292 (402)
T ss_pred EECcccccCcCCCCCchHHHHcCCCCC-CCeEEEEechhhhhccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHH
Confidence 9999988889999987 4567776 43 445888999999998789986 478999999887788888777788999999
Q ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 352 ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
.++++++.. +...++.++++++.+.+.+.+... + .....++.++.+..+....++.++|+++||.+.+..+|
T Consensus 293 ~a~l~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~---~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 364 (402)
T PRK07505 293 LASAEIHLS----EELDQLQQKLQNNIALFDSLIPTE---Q-SGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFP 364 (402)
T ss_pred HHHHHHHhc----cCcHHHHHHHHHHHHHHHHHHHhc---C-CCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCC
Confidence 999987632 133445555655555544332211 1 11223333444333234678999999999999988888
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
..+.+.+++||++++.+|++|+++++++|++++++
T Consensus 365 ~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 365 VVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 77666689999999999999999999999988753
No 18
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=2.1e-44 Score=366.69 Aligned_cols=343 Identities=18% Similarity=0.195 Sum_probs=279.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc---ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS---YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s---~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (489)
.+|..+.+++|+|+||.| |++||||.| ++++|+ +||++.+|+.++++++......
T Consensus 16 ~~~~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~----- 73 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQ---------------GKEYIDFAGGIAVNALGH--AHPELVKALIEQADKLWHIGNG----- 73 (397)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhcccccCc-----
Confidence 567788999999999999 999999966 355666 4799999999999984221111
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCC------
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~------ 207 (489)
..++.+.+|+++|+++.+.+.+++++||++||..+++.. .++.++|..+..+|+++..++..++.
T Consensus 74 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03246 74 YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQG 153 (397)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 236778999999999998888889999999997777765 25667888999999998877776553
Q ss_pred ------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEc
Q 046230 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 208 ------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DE 277 (489)
.+..+++||++++++.+.+ +.++|++||++++.|.+. +|++|+++|++||+++|+||
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 220 (397)
T TIGR03246 154 FAPLPGGIKHAPYNDLAAAKALISD-------------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDE 220 (397)
T ss_pred CCCCCCceEEeCCCCHHHHHHHhcc-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 3456889999999988853 578999999999999653 49999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ ++|++|++ ..+++++.| |++ |++|++|+ | |++++++++++.+....+..+|+ ++|+.++++++
T Consensus 221 v~t--G~Gr~G~~~a~~~~gv~p---Di~--t~~K~lgg-G~pigav~~~~~i~~~~~~~~~~~t~~--~~p~~~aaa~a 290 (397)
T TIGR03246 221 VQT--GVGRTGELYAYMHYGVTP---DIL--TSAKALGG-GFPIGAMLTTTEIAAHLKVGTHGTTYG--GNPLACAVAGK 290 (397)
T ss_pred hhh--cCCccccchhhhhcCCCC---CEE--EeehhhhC-CcceeEEEEcHHHHHhccCCCcCCCCC--CCHHHHHHHHH
Confidence 998 89999998 668899988 999 99999985 7 88899999999887655555555 89999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeC--CCCCCeEEEEeCCC--CcHHHHHHHHhhCCceEEe
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLG--DNDSPVMPIMLYNP--AKIPAFSRECLRQNVAVVT 427 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~ 427 (489)
+|+++ ..++++++++++++++++.|++++ +.+.. ...+.++++.+... .....+++.|+++|+++.+
T Consensus 291 ~l~~~-------~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~ 363 (397)
T TIGR03246 291 VLDLV-------NTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI 363 (397)
T ss_pred HHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee
Confidence 99998 446789999999999999999874 32222 23356666666432 3466899999999999884
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
. +.+++||+|++.+|++||++++++|+++++++
T Consensus 364 ~-------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 364 A-------GPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred c-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 34789999999999999999999999988653
No 19
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-44 Score=339.22 Aligned_cols=362 Identities=30% Similarity=0.508 Sum_probs=318.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|++|+||.|.||++|..+ +++.+.+...+++||.+.|+++.++|+.++|..++++||+|+|.+++++.+.|++++..++
T Consensus 93 G~~~~N~aS~NfL~l~~~-~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~i 171 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIEN-EEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAI 171 (467)
T ss_pred Cceeecccchhhhhhccc-HHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcc
Confidence 899999999999999987 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 179 PVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 179 ~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
+|++++||+|..+...+..+..|++++.-.+..|+|||+++||+.+.+.....+.....+..+..|++|++|-++|.++|
T Consensus 172 pafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p 251 (467)
T KOG1358|consen 172 PAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP 251 (467)
T ss_pred hhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc
Confidence 99999999999999999999999999999999999999999999987654332222111233668889999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcc
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHL 338 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~ 338 (489)
+++|++++.||...+|+||.+++|.+|++|+|+++|+++++.++|++++++.-+++..||+++|+.-++++-+-.+.+++
T Consensus 252 l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y~ 331 (467)
T KOG1358|consen 252 LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGYC 331 (467)
T ss_pred cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEeeeecccccee
Confidence 99999999999999999999999999999999999999999999999999999999878999998888888777788899
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC--------
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA-------- 409 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~-------- 409 (489)
|+.+.+|..+.++..+++++. +.++..+.++.+...+...|+.. ++.+.++..+|++.+.+....
T Consensus 332 fSAslPp~la~aa~~ai~i~~------~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~ 405 (467)
T KOG1358|consen 332 FSASLPPYLAGAAIKAILIEE------WNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEK 405 (467)
T ss_pred eeccCchhhhhhHHHHHHHHh------hCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHH
Confidence 999999999999999999884 45668888888888899999887 789999999999988886532
Q ss_pred cHHHHHHHHhhCCceEEeecCCCc---CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPAT---PLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~---~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...++.+.|+.+|+.+....+-.. -.-...+|+|+++.++++|++++.+.++++...+
T Consensus 406 lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 406 LLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 133678888888998876433211 1123469999999999999999999999886543
No 20
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=3.7e-42 Score=350.17 Aligned_cols=368 Identities=35% Similarity=0.638 Sum_probs=309.1
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+++.+.+++|+|++ +| |+++|||++++++|++.+ |.+.+++.+++++++...+.++...|..+
T Consensus 16 ~~~~~~~~~g~~~~-~~---------------g~~~id~~~~~~~g~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~g~~~ 78 (385)
T TIGR01825 16 SIRVLESAQGPRVR-VN---------------GKEVINLSSNNYLGFADH-PRLKEAAAQAIQQYGVGAGAVRTIAGTLR 78 (385)
T ss_pred cccccccCCCceEE-EC---------------CceEEEeeccCccCCCCC-HHHHHHHHHHHHHcCCCCCccCcccCCcH
Confidence 46779999999999 88 999999998888898754 89999999999988765555666668889
Q ss_pred hHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHH
Q 046230 147 VHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLRE 226 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~ 226 (489)
+..++++.++++.+.+..+++++|++++..++.++.++||.|+++.++|+++..++...|+++..+++.|++++++.+++
T Consensus 79 l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~ 158 (385)
T TIGR01825 79 LHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRE 158 (385)
T ss_pred HHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHh
Confidence 99999999999999888999999999998888888999999999999999999898999999888888899999998876
Q ss_pred HHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEE
Q 046230 227 QIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMM 306 (489)
Q Consensus 227 ~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~ 306 (489)
... .++.+|+++++++++|.+.|+++|.++|++||+++|+||+|+.|.++++|.+...+++++ .++|+++
T Consensus 159 ~~~---------~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 228 (385)
T TIGR01825 159 NPS---------YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQV 228 (385)
T ss_pred hcc---------CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEE
Confidence 321 246678899999999999999999999999999999999998777877776655566776 4568999
Q ss_pred cccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 307 GTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 307 ~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
+||||++|++|||+++++++++.+......+.+++..+|+.++++.++|+.+. ...+..+++.++++++.+.|+
T Consensus 229 ~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~ 302 (385)
T TIGR01825 229 GTLSKAIGVVGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ------RSPELMERLWDNTRFFKAGLG 302 (385)
T ss_pred EeccHHhhcCCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHH
Confidence 99999999888999999999999876654444555578888889999998763 124577888899999999999
Q ss_pred hCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 387 KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 387 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
++|+++..+ .++++++.+.......++++.|+++||.+.+..+|..+.+..++|++++..+|++++++++++|++++++
T Consensus 303 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 303 KLGYDTGGS-ETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HcCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 999887643 3567776654433456899999999999876777766667789999999999999999999999999876
Q ss_pred hC
Q 046230 467 VG 468 (489)
Q Consensus 467 ~~ 468 (489)
++
T Consensus 382 ~~ 383 (385)
T TIGR01825 382 LG 383 (385)
T ss_pred hC
Confidence 54
No 21
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-43 Score=359.65 Aligned_cols=357 Identities=17% Similarity=0.198 Sum_probs=282.7
Q ss_pred ccCCCccCCCC-CeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 66 CFGRPISSAPD-AWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 66 ~~~~~i~~~~G-~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
.++..+.+++| +|+||.| |++||||. +.+...++|+||+|++|+.+|+++....+ . ..
T Consensus 62 ~~~~~~~~~~G~~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~--~~ 121 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQ---------------GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---Q--EL 121 (459)
T ss_pred CCCeeEEeccCeEEEEECC---------------CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---c--cc
Confidence 55678899999 9999999 99999994 44678889889999999999999864432 1 12
Q ss_pred cchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhh---cC---CCCEEEEcCCCchHHHHHHHhcCCe-------
Q 046230 144 TLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVL---MR---KGSLIISDSLNHNSIVNGARGSGAT------- 208 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al---~~---~g~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (489)
.++...+|+++|++.++. +.+++.+||++||..+++.. ++ +..+|.+...+|+.+...+..++..
T Consensus 122 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 122 LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 467778999999998764 35666699999996665543 32 3356777888998877666554421
Q ss_pred -----EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccc
Q 046230 209 -----IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 209 -----~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~ 279 (489)
+..++.+|.+++++.++..... +.+.++||+||++++.|.+.| |++++++|++||+++|+||||
T Consensus 202 ~~~~~~~~~~~~d~~~l~~~l~~~~~~-------~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 274 (459)
T PRK11522 202 PLLPGFRHVPFGNIEAMRTALSECKKT-------GDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ 274 (459)
T ss_pred CCCCCCcccCCCCHHHHHHHHHHhhcc-------CCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce
Confidence 2346778999999988653111 246789999999999999877 999999999999999999999
Q ss_pred ccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 280 SIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 280 s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
+ +|||+|++ .++++|+.| ||+ ||+|++|+ | |++++++++++.+......+..+.++||+.|++++++
T Consensus 275 t--G~GRtG~~~a~e~~gv~P---Div--t~gK~lgg-G~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~ 346 (459)
T PRK11522 275 T--GMGRTGKMFACEHENVQP---DIL--CLAKALGG-GVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALAT 346 (459)
T ss_pred e--cCCccchhhhhhccCCCC---CEE--EechhhhC-CCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHH
Confidence 9 89999998 889999999 999 99999986 4 7888889998877532212222334899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe-eeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE-VLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
|+++ +.+++++++++++++|+++|+++ +++ ++. ...+.++++.+..+.....+.+.|+++||++.+..
T Consensus 347 L~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~ 419 (459)
T PRK11522 347 INVL-------LEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL 419 (459)
T ss_pred HHHH-------hcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecC
Confidence 9999 44678999999999999999987 343 222 23477888888766556789999999999997422
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.+.+++||+||+.+|++|||+++++|+++++++..
T Consensus 420 -----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 420 -----NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred -----CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 23579999999999999999999999999987653
No 22
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=7.5e-43 Score=361.51 Aligned_cols=353 Identities=16% Similarity=0.192 Sum_probs=272.5
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+.+|..+.+++|+|+||+| |++||||.+ .+...++|+||+|++|+.+|+++++.... ...+
T Consensus 69 ~~~p~~i~~~~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~---~~~~ 130 (504)
T PLN02760 69 DLEPLVIEKSEGSYVYDIN---------------GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS---FWNR 130 (504)
T ss_pred cCCCceEEeeeeeEEEECC---------------CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceec---cccc
Confidence 4467788999999999999 999999965 34456667789999999999998654321 1123
Q ss_pred cchhHHHHHHHHHHHhC-C--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCeEE-
Q 046230 144 TLMVHNELEECVARFVG-K--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGATIR- 210 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g-~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~~~- 210 (489)
.++...+|+++|++.+. . +.+++++||++||..+++... ++.++|.++..+|+++..++.++|....
T Consensus 131 ~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~ 210 (504)
T PLN02760 131 TTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALH 210 (504)
T ss_pred CcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhc
Confidence 57888999999998853 3 356677999999977776542 3456788899999999888776664211
Q ss_pred -----------EecCC----------C--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---
Q 046230 211 -----------VFQHN----------T--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK--- 258 (489)
Q Consensus 211 -----------~~~~~----------d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~--- 258 (489)
.++.+ + .++|++++.. + .+...++||+||++++.|.+.|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~---~------~~~~iAAvI~EPv~g~gG~~~p~~~ 281 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILK---E------GPETIAAFIAEPVMGAGGVIPPPAT 281 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHh---c------CCCceEEEEECCccCCCCCcCCCHH
Confidence 11110 1 1345655532 1 1246889999999999999877
Q ss_pred -hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhh
Q 046230 259 -FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYT 333 (489)
Q Consensus 259 -l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~ 333 (489)
+++|+++|++||++||+|||++ +|||+|.+ .++++|+.| ||+ ||+|++|+ +-|++++++++++.+...
T Consensus 282 yl~~lr~lc~~~g~lLI~DEV~T--GfGRtG~~~a~e~~gv~P---Div--tlgK~lggG~~PigAv~~~~~i~d~~~~~ 354 (504)
T PLN02760 282 YFEKIQAVLKKYDILFIADEVIC--AFGRLGTMFGCDKYNIKP---DLV--SLAKALSSAYMPIGAVLVSPEISDVIHSQ 354 (504)
T ss_pred HHHHHHHHHHHcCCEEEecchhh--CCcccchhhHHHhcCCCC---cEE--EecccccCCccccceEeecHHHHhhhhcc
Confidence 9999999999999999999999 99999998 789999999 999 99999976 127789999999988642
Q ss_pred -------CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEE
Q 046230 334 -------CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPI 403 (489)
Q Consensus 334 -------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~ 403 (489)
.++++|+ +||+.|++++++|+++ ..+++++++++++++|++.|+++ ..++++ ...+.++.+
T Consensus 355 ~~~~~~~~h~~T~~--gnPl~~Aaala~Le~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gi 425 (504)
T PLN02760 355 SNKLGSFAHGFTYS--GHPVSCAVALEALKIY-------KERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGT 425 (504)
T ss_pred cccccCcccCCCCC--CCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEE
Confidence 3444555 8999999999999999 44678999999999999999886 222222 233566666
Q ss_pred EeCCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 404 MLYNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 404 ~~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.+.. ....+.+.|+++||++.+ . .+.+||+|++.+|++|||+++++++++++.+.
T Consensus 426 e~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~-------~-g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 426 EFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRV-------A-GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EEecCCcccccccchhHHHHHHHHHHHhCCcEEEe-------c-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 664321 145688899999999873 1 25799999999999999999999999998763
No 23
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=9.5e-42 Score=343.82 Aligned_cols=360 Identities=31% Similarity=0.592 Sum_probs=300.3
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhH
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVH 148 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (489)
||..+++|+++. .+ |+++|||++++++|++. ||++.+++.+++++|+.+.++++...|..+..
T Consensus 1 ~~~~~~~~~~~~-~~---------------g~~~id~~~~~~~g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~ 63 (360)
T TIGR00858 1 RPLDRGPGPEVV-RD---------------GRRLLNFSSNDYLGLAS-HPEVIQAAQQGAEQYGAGSTASRLVSGNSPLH 63 (360)
T ss_pred CCcccCCCCeEE-EC---------------CceEEecccCCcccCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHH
Confidence 578899999997 67 99999999888888764 48899999999998887655555556777888
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHH
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~ 228 (489)
.++++.++++++.++.+++++|++++..++.++.++|+.|+++.++|.++..+++..|++++.++..|+++|++.++...
T Consensus 64 ~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~ 143 (360)
T TIGR00858 64 EELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNR 143 (360)
T ss_pred HHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcc
Confidence 99999999999999999999999998777788889999999999999999999999999999999899999999887520
Q ss_pred hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcc
Q 046230 229 AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 229 ~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
..++.+|+++++++++|...++++|.++|+++|+++|+||+|+.|.++..+.+....+++++.+.||+++|
T Consensus 144 ---------~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s 214 (360)
T TIGR00858 144 ---------GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGT 214 (360)
T ss_pred ---------cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEe
Confidence 01457888999999999999999999999999999999999997767766665556677776777999999
Q ss_pred cccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 309 FTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 309 ~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
|||+||+.|||+++++++++.+......+.++++.++..++++.++++.+. ..++.+++++++.+++.+.|+++
T Consensus 215 ~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 215 LSKALGSYGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQ------EEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred chhhhhccCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh------hCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999989999999999998865554444445577887888889998763 23567899999999999999999
Q ss_pred CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
++.+. +..++++++.+.......++.++|+++||.+.+..++..+.+.+.+|++++..+|++|+++++++|+
T Consensus 289 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 289 GFTLM-PSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCccC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 87765 3457778877754444678999999999999976655444456789999998899999999999873
No 24
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.4e-41 Score=345.83 Aligned_cols=361 Identities=29% Similarity=0.528 Sum_probs=299.9
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhH
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVH 148 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (489)
+++.+++|+++++ + |+++|||++++++|+.. +|.+++++.+++.+|+.+.+.++...|..+..
T Consensus 24 ~~~~~~~g~~~~~-~---------------g~~~id~~~~~~~g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~ 86 (385)
T PRK05958 24 RPREGGAGRWLVV-D---------------GRRMLNFASNDYLGLAR-HPRLIAAAQQAARRYGAGSGGSRLVTGNSPAH 86 (385)
T ss_pred cccccCCCceeEe-C---------------CceEEEeeCCCcccCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHH
Confidence 5789999999996 8 99999999887777753 48899999999998876665566666778889
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHH
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~ 228 (489)
.++++.++++++.++.+++++|++++..++.++.++||.|+++.++|+++..++...|++++.++.+|++++++.++..
T Consensus 87 ~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~- 165 (385)
T PRK05958 87 EALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKW- 165 (385)
T ss_pred HHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhc-
Confidence 9999999999998899999999999877778889999999999999999999999999999999999999999988651
Q ss_pred hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcc
Q 046230 229 AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 229 ~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
+..+++++++++++++|...++++|+++|++||++||+||+|+.|.++++|.+....++++..+.+|+++|
T Consensus 166 ---------~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s 236 (385)
T PRK05958 166 ---------RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGT 236 (385)
T ss_pred ---------cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEe
Confidence 12467888999999999999999999999999999999999987777777765444444543333688899
Q ss_pred cccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 309 FTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 309 ~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
+||+||++|||+++++++++.+......+.++.+.+|..++++.++|+.+.. .+++.+++.++++++.+.|+++
T Consensus 237 ~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~------~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 237 LGKALGSSGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR------EPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred chhhcccCCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998889999999999888655444445556888888889999988731 2567899999999999999998
Q ss_pred CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
++++.. +.+.++++.+.......++.+.|.++||.+.+...+..+.+.+++|++++..+|++|+++++++|+++
T Consensus 311 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 311 GFQLMD-SQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCcCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 887654 35667777765434566899999999999997555544455689999999889999999999999875
No 25
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.2e-42 Score=354.19 Aligned_cols=341 Identities=17% Similarity=0.211 Sum_probs=276.2
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+++++|+|+||.| |++|||| ++.+...++|+||++.+|+.+++++++.... . ..
T Consensus 21 ~~p~~~~~~~G~~l~d~~---------------G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---~--~~ 80 (396)
T PRK04073 21 PLPIVISEAEGVWVKDPE---------------GNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR---A--FH 80 (396)
T ss_pred CCCceEEeeeecEEEECC---------------CCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc---c--cC
Confidence 456678899999999999 9999999 4456678999999999999999998765431 1 24
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-----------cCCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-----------MRKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-----------~~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++.+.+|+++|+++.+.+.+++++||++|+..+++.. .++.++|.++..+|+.+...+.+++..
T Consensus 81 ~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~ 160 (396)
T PRK04073 81 SDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRG 160 (396)
T ss_pred CHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccC
Confidence 6778899999999998888899999999997776654 234567888899999887777665422
Q ss_pred -------EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 209 -------IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 209 -------~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
+..++++|++++++.+.+ ++++|++|++++++|.+.+ +++|+++|++||+++|+||
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~i~~-------------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE 227 (396)
T PRK04073 161 FGPMLPGIKKIPYGDLEALKAAITP-------------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADE 227 (396)
T ss_pred CCCCCCCceEeCCCCHHHHHHhccc-------------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 356788899999887743 4678999999999998866 8999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ ++|++|.. ..++.++.| |++ +|||++|+.| |++++++++++.+....+..+++ +||+.++++++
T Consensus 228 v~~--g~g~~g~~~~~~~~~~~p---di~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~a 298 (396)
T PRK04073 228 IQT--GLGRTGKLFACDWDNVTP---DMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFG--GNPLACAVSIA 298 (396)
T ss_pred chh--CCCcCcHHHHhhhcCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHH
Confidence 999 89999976 556778877 988 8999998754 89999999999887555544555 89999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
+|+.+ ..+++.++++++++++.+.|++++.+.+. ...+.++++.+. ....++.++|+++||++.+
T Consensus 299 aL~~~-------~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~--~~~~~~~~~l~~~Gv~~~~---- 365 (396)
T PRK04073 299 ALEVL-------EEEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELN--EPARPYCEALKEEGLLCKE---- 365 (396)
T ss_pred HHHHH-------HhcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEec--chHHHHHHHHHHCCeEEec----
Confidence 99988 33567788899999999999987543222 223555666553 3467899999999999873
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.+++||+|++.+|++|+++++++|++++
T Consensus 366 ---~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 366 ---THETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ---CCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 234789999999999999999999998875
No 26
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=2.6e-42 Score=351.85 Aligned_cols=346 Identities=16% Similarity=0.179 Sum_probs=273.2
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHH
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHN 149 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (489)
+.++.|.|+||.| |++||||. +.+...++|+||.|++|+.+|+++....+ + +..++...
T Consensus 61 ~~~~~g~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~ 120 (442)
T TIGR03372 61 WQAGGLNTLIDTQ---------------GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---Q--ELLDPLRA 120 (442)
T ss_pred EEeCCeeEEEECC---------------CCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---c--ccCCHHHH
Confidence 3567779999999 99999994 44678889889999999999999865432 1 12367778
Q ss_pred HHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhh---c---CCCCEEEEcCCCchHHHHHHHhcCC------------eE
Q 046230 150 ELEECVARFVGKP--AAIVFGMGYVTNSAILPVL---M---RKGSLIISDSLNHNSIVNGARGSGA------------TI 209 (489)
Q Consensus 150 ~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al---~---~~g~~Vl~~~~~h~~~~~~~~~~g~------------~~ 209 (489)
++.++|++.++.+ .+++.+||++||..+++.. . ++..+|.+...+|+.+...+..++. .+
T Consensus 121 ~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~ 200 (442)
T TIGR03372 121 LLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGF 200 (442)
T ss_pred HHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCC
Confidence 9999999988653 4556699999996655543 2 3445677888899987766655431 23
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccc
Q 046230 210 RVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
..++.+|.+++++.++..... +...++||+||++++.|.+.| |++|+++|++||+++|+||||+ +||
T Consensus 201 ~~~p~~d~~~~~~~l~~~~~~-------~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t--G~G 271 (442)
T TIGR03372 201 HHVAFGDIEAMLKALNECKKT-------GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT--GMG 271 (442)
T ss_pred EEeCCCCHHHHHHHHHHHhcC-------CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc--CCC
Confidence 456778999998888653211 247899999999999999887 9999999999999999999999 899
Q ss_pred CCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhh--CCCcccccCCCHHHHHHHHHHHHHHH
Q 046230 286 KTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYT--CPAHLYATSISPPAAEQIISAIKVIL 359 (489)
Q Consensus 286 ~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~--~~~~~~~~~~~p~~~aa~~a~L~~i~ 359 (489)
|+|++ .++++|+.| ||+ ||+|++|+ +.|++++++++++.+... .+..+| ++||+.|++++++|+++
T Consensus 272 RtG~~~a~e~~gv~P---Div--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~--~gnp~~~Aaa~a~L~~i- 343 (442)
T TIGR03372 272 RTGKMFACEHEGVQP---DIL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTF--GGNPLACAAALATINEL- 343 (442)
T ss_pred ccccchhhhhcCCCC---Cee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCC--CCCHHHHHHHHHHHHHH-
Confidence 99998 889999999 999 89999985 127888899999888432 223333 48999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe-ee--CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC
Q 046230 360 GEDGSSRGAQKLARIRENSNFFRSELQKM--GFE-VL--GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP 434 (489)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-v~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~ 434 (489)
+.+++.++++++++++++.|+++ .++ .+ ....+.++++.+..+.....+++.|+++||++.+.++
T Consensus 344 ------~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~---- 413 (442)
T TIGR03372 344 ------LEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTLN---- 413 (442)
T ss_pred ------HhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeecCC----
Confidence 55678899999999999999886 232 22 2345778888887665567899999999999975332
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 435 LLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+.+++||.||+.+|++|+|+++++|++++
T Consensus 414 -~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 414 -NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred -CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 23789999999999999999999998763
No 27
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1e-42 Score=344.11 Aligned_cols=348 Identities=18% Similarity=0.228 Sum_probs=276.8
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+++|.+++|.|++|.| |++|||. +|.+..+++|++|++.+|+.+|+++........ .+++
T Consensus 27 ~~~i~~aeG~yl~d~~---------------G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~----~t~~ 87 (449)
T COG0161 27 PRVIVRAEGVYLTDID---------------GRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGG----FTHE 87 (449)
T ss_pred ceeeeecceeEEEeCC---------------CCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcc----cCCc
Confidence 7899999999999999 9999998 555777888889999999999999966543111 2355
Q ss_pred hHHHHHHHHHHHhC---CCCEEEeCccHHHHHHhHhhhc-------CC--CCEEEEcCCCchHHHHHHHhcCCe-EE---
Q 046230 147 VHNELEECVARFVG---KPAAIVFGMGYVTNSAILPVLM-------RK--GSLIISDSLNHNSIVNGARGSGAT-IR--- 210 (489)
Q Consensus 147 ~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~al~-------~~--g~~Vl~~~~~h~~~~~~~~~~g~~-~~--- 210 (489)
...+|.++|+++.+ .+.+++.+|||+|+..+++... .+ ...|-....||+.++.+++..|.. ..
T Consensus 88 Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~ 167 (449)
T COG0161 88 PAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAF 167 (449)
T ss_pred hHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhh
Confidence 58999999999998 3456666999999965555432 22 336667889999998888777621 11
Q ss_pred ---------E--ecC----C-----C------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC-CCCCCC----h
Q 046230 211 ---------V--FQH----N-----T------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM-EGELCK----F 259 (489)
Q Consensus 211 ---------~--~~~----~-----d------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~-~G~~~~----l 259 (489)
. .|+ + + .++||++|.+ ++|.+.+++|+||+... +|.+.| |
T Consensus 168 ~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---------~g~~~IAAfI~EPv~g~agG~~~pp~~Yl 238 (449)
T COG0161 168 YDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---------HGPETIAAFIVEPVVGGAGGMLVPPPGYL 238 (449)
T ss_pred ccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---------cCcccEEEEEecccccccCCcccCChHHH
Confidence 1 111 0 1 3455665555 34578999999999988 777655 9
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh-
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT- 333 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~- 333 (489)
++++++|+|||++||+|||-+ +|||||.. +++++|+.| ||+ |++|++++ | |+++.++++.+.+...
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~t--GFGRTG~~FA~e~~gi~P---Di~--~~aKGLT~-GY~Pl~a~l~~~~I~~~~~~~~ 310 (449)
T COG0161 239 KRVREICDKYGILLIADEVAT--GFGRTGKMFACEHAGIVP---DIL--CLAKGLTG-GYLPLSAVLTSDRIYEAFSDGD 310 (449)
T ss_pred HHHHHHHHHcCcEEEeeccee--CCCcCchhhhhhhcCCCC---Cee--eecccccc-cchhhHhHhhhHHHHHHHhccc
Confidence 999999999999999999999 99999999 999999999 999 99999987 6 7778889999888764
Q ss_pred ----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCC--CCeEEEEe
Q 046230 334 ----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-M-GFEVLGDND--SPVMPIML 405 (489)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~--~~~~~~~~ 405 (489)
.|+++|+ +||++||+++++|+++ +.++++++.++++.+|.+.|++ + +.+.+++.+ +.+..+.+
T Consensus 311 ~~~f~HG~TYs--ghPlacAaAla~L~i~-------e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iEl 381 (449)
T COG0161 311 AGAFMHGHTYS--GNPLACAAALANLDIL-------EEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIEL 381 (449)
T ss_pred CCeeccCCccc--cCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEE
Confidence 3555555 9999999999999999 6788999999999999999998 3 444555443 55555565
Q ss_pred CCCCc---------HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 406 YNPAK---------IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 406 ~~~~~---------~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
..+.. ...+.+.++++|++++|. .+.+-++||+.+|++|||++++++.+++++..
T Consensus 382 v~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~--------g~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 382 VADKATKTPFEARVGARVRAAALERGLLIRPL--------GDVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred ecccccccchhhhHHHHHHHHHHHCCeEEeec--------CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 44433 557889999999999953 35899999999999999999999999998753
No 28
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=3.5e-42 Score=351.50 Aligned_cols=346 Identities=15% Similarity=0.177 Sum_probs=275.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||.| |++||||.|. +...++|+||++.+|+.+++.++...... ..
T Consensus 20 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~-----~~ 79 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQ---------------GKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNG-----YT 79 (406)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCc-----cC
Confidence 567788999999999999 9999999652 33344445799999999999885332111 13
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCC--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGA-------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (489)
++.+.+++++|+++.+.+.+++++||++||..+++... ++.++|..+..+|+.+...+.+++.
T Consensus 80 ~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 159 (406)
T PRK12381 80 NEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFA 159 (406)
T ss_pred CHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCC
Confidence 66778999999999888888888999999977666542 3455677888899988766666552
Q ss_pred ----eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC----CChHHHHHHHHHcCcEEEEEccc
Q 046230 208 ----TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL----CKFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 208 ----~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~----~~l~~i~~l~~~~~~~li~DEa~ 279 (489)
.+..++++|+++|++.+.+ +.++|++||++++.|.+ .++++|+++|++||++||+||+|
T Consensus 160 ~~~~~~~~~~~~d~~~l~~~l~~-------------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 226 (406)
T PRK12381 160 PLPPDIRHAAYNDLNSASALIDD-------------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ 226 (406)
T ss_pred CCCCCeeEeCCCCHHHHHHhccC-------------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh
Confidence 2456788999999988753 57788899999998854 45999999999999999999999
Q ss_pred ccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHH
Q 046230 280 SIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAI 355 (489)
Q Consensus 280 s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L 355 (489)
+ ++|++|.+ ..+++++.| |++ ||||++|+ | |++++++++++.+....+..+|+ ++|+.++++.++|
T Consensus 227 t--G~gr~G~~~~~~~~~v~p---Di~--t~sK~l~g-G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~pl~~aaa~a~l 296 (406)
T PRK12381 227 T--GVGRTGELYAYMHYGVTP---DVL--TTAKALGG-GFPIGAMLTTEKCASVMTVGTHGTTYG--GNPLASAVAGKVL 296 (406)
T ss_pred h--CCCCCcchhhhHhhCCCC---CEE--EehhhhhC-CCceEEEEEcHHHHhhcCCCCCCCCCC--CCHHHHHHHHHHH
Confidence 8 89999987 557889888 887 99999985 7 99999999999887655555554 9999999999999
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeC--CCCCCeEEEEeCCC--CcHHHHHHHHhhCCceEEeec
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLG--DNDSPVMPIMLYNP--AKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
+++ ..++++++++++++++++.|++++ +.+.. ...+.++++.+..+ .....+.+.|+++||++.+.
T Consensus 297 ~~l-------~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~- 368 (406)
T PRK12381 297 ELI-------NTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA- 368 (406)
T ss_pred HHH-------hhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-
Confidence 998 445789999999999999999873 33222 23355666665442 24568889999999999732
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.+++||+|++.+|++||++++++|+++++++.
T Consensus 369 ------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 369 ------GPNVVRFAPALNISEEEITTGLDRFARACERFV 401 (406)
T ss_pred ------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 336899999999999999999999999998764
No 29
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.4e-42 Score=348.86 Aligned_cols=343 Identities=14% Similarity=0.162 Sum_probs=266.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
..+..+.+++|+|+||.| |++||||+| .+...++|+||++.+|+.++++++..... . ..
T Consensus 17 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~--~---~~ 76 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHN---------------GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP--A---FY 76 (395)
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc--c---cc
Confidence 356778999999999999 999999965 23344555579999999999988543321 1 13
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc--------CCCCEEEEcCCCchHHHHHHHhcCCe--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM--------RKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~--------~~g~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (489)
++...+|.++|++..+.+++++++||++||..+++.+. ++.++|.++..+|+++..++.+++..
T Consensus 77 ~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 55666777777766556778888999999977777653 44668889999999999888877643
Q ss_pred ----EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccc
Q 046230 209 ----IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 209 ----~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s 280 (489)
+...+++|++++++.+.+ +.++|++||++++.|.+.| +++|+++|++||+++|+||+|+
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~-------------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t 223 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLITD-------------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT 223 (395)
T ss_pred CCCCceeeCCchHHHHHHHcCC-------------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 112345788888887742 5779999999999999877 9999999999999999999999
Q ss_pred cccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHH
Q 046230 281 IGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKV 357 (489)
Q Consensus 281 ~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (489)
++||+|++ +++++++.| ||+ ||+|++|+ +.|++++++++.. +....+..+| ++||+.|++++++|++
T Consensus 224 --G~GRtG~~~a~~~~gv~P---Di~--t~gK~lg~G~p~~av~~~~~i~~-~~~~~~~~T~--~g~pl~~aaala~L~~ 293 (395)
T PRK03715 224 --GCGRTGTLFAYELSGIEP---DIM--TLGKGIGGGVPLAALLAKAEVAV-FEAGDQGGTY--NGNPLMTAVGVAVISQ 293 (395)
T ss_pred --CCCCCcchhhHhhcCCCC---cee--eehhhhhCCcceEEEEEcccccc-ccCCCcCCCC--CCCHHHHHHHHHHHHH
Confidence 79999998 778999998 998 99999986 2288888888763 2222233344 4899999999999999
Q ss_pred HHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC---CceEEeecC
Q 046230 358 ILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ---NVAVVTVAF 430 (489)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~ 430 (489)
+ +.+++++++++++++|+++|+++ ++.- ....+.++++.+.++ ....+.+.+.+. ||++.+.
T Consensus 294 l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~-vrG~Glm~~i~l~~~-~~~~~~~~~~~~~~~Gi~~~~~-- 362 (395)
T PRK03715 294 L-------LAPGFLEGVRARGEYLKEKLLELSEERGLEG-ERGEGLLRALLLGKD-IGPQIVEKARDMQPDGLLLNAP-- 362 (395)
T ss_pred H-------HhccHHHHHHHHHHHHHHHHHHHhhcCCcCe-EEcceeEEEEEecCc-hHHHHHHHHHhccCCCEEEeec--
Confidence 9 44678999999999999999876 3321 123578888888653 233455555555 9998732
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..+++||+|++.+|++|||+++++|+++++++
T Consensus 363 -----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 363 -----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 23689999999999999999999999998764
No 30
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=350.87 Aligned_cols=352 Identities=16% Similarity=0.170 Sum_probs=266.6
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.|..+.+++|+|+||.| |++||||.+ .....++|+||+|++|+.+|+++++..+. ...+.+
T Consensus 36 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~---~~~~~~ 97 (460)
T PRK12403 36 GPRVMVRGEGLHLWDND---------------GKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM---FFHTTH 97 (460)
T ss_pred CCceEEeceeeEEEeCC---------------CCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec---ccccCC
Confidence 45678999999999999 999999954 35566787899999999999999765321 223457
Q ss_pred hhHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhhc------C-CCC-E-EEEcCCCchHHHHHHHhcCCeE-----
Q 046230 146 MVHNELEECVARFVG--KPAAIVFGMGYVTNSAILPVLM------R-KGS-L-IISDSLNHNSIVNGARGSGATI----- 209 (489)
Q Consensus 146 ~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al~------~-~g~-~-Vl~~~~~h~~~~~~~~~~g~~~----- 209 (489)
+.+.+|+++|+++++ .+.+++++||++||.++++... + +++ . |.....+|+++..++.+++...
T Consensus 98 ~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~ 177 (460)
T PRK12403 98 PAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG 177 (460)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC
Confidence 888999999999987 4577888999999977766553 2 223 3 3456778999888887765431
Q ss_pred ------EEecCC-------C----------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHH
Q 046230 210 ------RVFQHN-------T----------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEI 262 (489)
Q Consensus 210 ------~~~~~~-------d----------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i 262 (489)
..++.+ + +++|++.+.+. + +...++||+||++++.|.+.| |++|
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~---~------~~~iaavI~Epv~g~gG~~~~~~~yl~~l 248 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL---G------AENVAGFVAEPFQGAGGMIFPPESYWPEI 248 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh---C------CCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 112211 1 24455544321 1 246889999999999998877 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCc
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAH 337 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~ 337 (489)
+++|++||++||+||||+ +|||+|++ .++++|+.| ||+ +++|++|+ | |++++++++++.+......+
T Consensus 249 r~lc~~~g~lLI~DEV~t--GfGRtG~~~a~e~~gv~P---Div--~~gK~lgg-G~~Piga~v~~~~i~~~~~~~~~~~ 320 (460)
T PRK12403 249 QRICRQYDVLLCADEVIG--GFGRTGEWFAHEHFGFEP---DTL--SIAKGLTS-GYVPMGGLVLSKRIAEALVEQGGVF 320 (460)
T ss_pred HHHHHHcCCEEEEecccc--CCCcCchhhhhhhcCCCC---CeE--EEcccccc-cccceEEEEECHHHHHHHhcCCCcc
Confidence 999999999999999999 99999998 779999999 999 89999985 4 67778999999886432211
Q ss_pred --ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH-HHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCC-
Q 046230 338 --LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR-ENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPA- 409 (489)
Q Consensus 338 --~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~- 409 (489)
..+.++||+.|++++++|+++ +.++++++++ +++++|++.|+++ .+++++ ...+.++.+.+....
T Consensus 321 ~~~~T~~gnPl~~Aaala~L~~i-------~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~ 393 (460)
T PRK12403 321 AHGLTYSGHPVAAAVAIANLKAL-------RDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKA 393 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCcc
Confidence 123349999999999999999 4556889996 8999999999865 333332 334666777664221
Q ss_pred ------c----HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 410 ------K----IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 410 ------~----~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
. ...+...|+++|+++.+ . .+.+||+|++.+|++|+|+++++++++++++.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~Gll~~~-------~-~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 394 TRKRFANENDLAWRCRTIGFEEGVIIRS-------T-LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred ccccccchhHHHHHHHHHHHhCCEEEEe-------c-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 22456777899999973 1 24699999999999999999999999998763
No 31
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=6.4e-41 Score=342.44 Aligned_cols=369 Identities=32% Similarity=0.545 Sum_probs=305.3
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhH
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVH 148 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (489)
..+.+++|+++++.+ |+++|||++++++|++. +|.+.+++.+++++++.+.++++...|..++.
T Consensus 26 ~~~~~~~~~~~~~~~---------------g~~~i~l~~~~~~~~~~-~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~ 89 (397)
T PRK06939 26 RVITSPQGADITVAD---------------GKEVINFCANNYLGLAN-HPELIAAAKAALDSHGFGMASVRFICGTQDLH 89 (397)
T ss_pred ccccCCCCceEEecC---------------CCeEEEeeccCccccCC-CHHHHHHHHHHHHHcCCCCcccccccCCcHHH
Confidence 357789999999988 99999999989999984 58999999999988776555566667888899
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHH
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~ 228 (489)
.++++.++++++.++.+++++|++++..++.++.++||.|+++.++|+++..+++..+++++.++++|++++++.++...
T Consensus 90 ~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 169 (397)
T PRK06939 90 KELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAK 169 (397)
T ss_pred HHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhh
Confidence 99999999999988899999999999888899999999999999999999999999999999999999999999887542
Q ss_pred hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcc
Q 046230 229 AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 229 ~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
.. ..+..+|+++++++++|...++++|.++|++||++||+||+|++|.++.+|.+....+++.+ ++||+++|
T Consensus 170 ~~-------~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~-~~~i~~~S 241 (397)
T PRK06939 170 EA-------GARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMD-RVDIITGT 241 (397)
T ss_pred cc-------CCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCC-CCcEEEEE
Confidence 21 12456778889999999999999999999999999999999987666766655444556642 45899999
Q ss_pred ccccc-CCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 309 FTKSF-GSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 309 ~sK~~-g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
|||++ |+.|||+++++++++.+......+.++++.++..++++.++++.+. ..++.+++++++.+++++.|++
T Consensus 242 ~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~~ 315 (397)
T PRK06939 242 LGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE------ESDELRDRLWENARYFREGMTA 315 (397)
T ss_pred CHHHhCccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 5556999999999999887655555555667777888888888773 2357788999999999999999
Q ss_pred CCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 388 MGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 388 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++.+.. ..+.++++.+.......+|.+.|+++||.+.+..|+..+.+.+++|++++..++++++++++++|.++++++
T Consensus 316 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 316 AGFTLGP-GEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred cCCCcCC-CCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 8877654 345565555544345678999999999999876666545556799999998899999999999999998876
Q ss_pred C
Q 046230 468 G 468 (489)
Q Consensus 468 ~ 468 (489)
+
T Consensus 395 ~ 395 (397)
T PRK06939 395 G 395 (397)
T ss_pred C
Confidence 5
No 32
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=350.06 Aligned_cols=350 Identities=17% Similarity=0.239 Sum_probs=271.9
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
..+.+++|+|+||+| |++||||.|+ +...++|+||+|.+|+.+++++++....+.. .++.
T Consensus 27 ~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~----~~~~ 87 (433)
T PRK08117 27 LPVVKGEGCYYYGVD---------------GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI----YYES 87 (433)
T ss_pred ceEEeeeeeEEEeCC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc----CCHH
Confidence 678999999999999 9999999554 5567778899999999999998765442221 3677
Q ss_pred HHHHHHHHHHHhC-CCCEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC--e-----------E
Q 046230 148 HNELEECVARFVG-KPAAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA--T-----------I 209 (489)
Q Consensus 148 ~~~l~~~la~~~g-~~~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~--~-----------~ 209 (489)
+.+|+++|+++++ ..+.++| +||++||..+++. +.++.++|.++..+|+.+..++..++. . +
T Consensus 88 ~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 167 (433)
T PRK08117 88 ILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSV 167 (433)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCc
Confidence 8999999999983 3345555 8999999666665 456777888999999988776654431 0 1
Q ss_pred EEecC-----------------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHH
Q 046230 210 RVFQH-----------------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKK 268 (489)
Q Consensus 210 ~~~~~-----------------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~ 268 (489)
..++. +++++|+++++.... +.+.++||+||++++.|.+.| |++|+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 168 YQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT--------PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR 239 (433)
T ss_pred EEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC--------CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH
Confidence 11221 145566666653111 246889999999999999988 9999999999
Q ss_pred cCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCC
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSIS 344 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~ 344 (489)
||++||+||+|+ +||++|++ ..+++++.| ||+ ||||++|+ | |++++++++++.+....+..+|+ +|
T Consensus 240 ~g~llI~DEv~t--G~gr~G~~~~~~~~gv~p---Di~--t~sK~lg~-G~pigav~~~~~i~~~~~~~~~~~T~~--~n 309 (433)
T PRK08117 240 HGILLIFDEVQT--GFGRTGEWFAAQTFGVVP---DIM--TIAKGIAS-GLPLSAVVASKELMEQWPLGSHGTTFG--GN 309 (433)
T ss_pred cCCEEEEecchh--ccCccccchhHhhcCCCC---CEe--ehhhhccC-CCcceeEEEcHHHHhhccCCCCCCCCC--cC
Confidence 999999999999 79999988 568889988 998 99999985 6 89999999999886555554454 89
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeC--CCCCCeEEEEeCCC------CcHHHH
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLG--DNDSPVMPIMLYNP------AKIPAF 414 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~--~~~~~~~~~~~~~~------~~~~~~ 414 (489)
|+.+++++++|+++ ..++++++++++++++++.|+++. +++.. ...+.++++.+..+ .....+
T Consensus 310 p~~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~ 382 (433)
T PRK08117 310 PVACAAALATLEVI-------KEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKI 382 (433)
T ss_pred HHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHH
Confidence 99999999999998 445788999999999999998862 33222 23345556666432 234578
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.|+++||++.+.+ ...+++||+||+.+|+++|++++++|+++++++
T Consensus 383 ~~~l~~~Gv~~~~~g-----~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 383 LDKCLEKGLLFYLCG-----NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHCCCEEeecC-----CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 899999999987532 124789999999999999999999999998776
No 33
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2.4e-41 Score=347.86 Aligned_cols=353 Identities=16% Similarity=0.160 Sum_probs=268.8
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..+.+++|+|+||+| |++||||. +.+...++|+||++++|+.+|+++...... ...++
T Consensus 30 p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~ 89 (451)
T PRK07678 30 TMVVAKAEGAWVTDIQ---------------GNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL-----TQSHE 89 (451)
T ss_pred CeeEEeeeeeEEEeCC---------------CCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc-----ccCCH
Confidence 5678999999999999 99999994 456778888899999999999998543321 11356
Q ss_pred hHHHHHHHHHHHhCCCC-EEEeCccHHHHHHhHhhh---c------CCCCEEEEcCCCchHHHHHHHhcCCe--------
Q 046230 147 VHNELEECVARFVGKPA-AIVFGMGYVTNSAILPVL---M------RKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~-~i~~~sG~~a~~~~~~al---~------~~g~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (489)
...+|.++|+++++... .++.+||++|+..+++.. . ++..+|.....+|+.+...+..++..
T Consensus 90 ~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 169 (451)
T PRK07678 90 PAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEP 169 (451)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCC
Confidence 67899999999987654 445589999996665543 2 23456667888898877666554321
Q ss_pred ----EEEecCC--------------CH---HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHH
Q 046230 209 ----IRVFQHN--------------TP---SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEII 263 (489)
Q Consensus 209 ----~~~~~~~--------------d~---~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~ 263 (489)
+..++.+ |. +.++++++. . .+.+.++||+||+++..|.+.| +++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~------~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr 240 (451)
T PRK07678 170 LAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW---E------LSETIAAVIMEPIITGGGVLMPPQDYMKAVK 240 (451)
T ss_pred CCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh---c------CCCceEEEEEccccCCCCcccCCHHHHHHHH
Confidence 1112211 11 123444432 1 1257899999999998888755 99999
Q ss_pred HHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh-----
Q 046230 264 AICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT----- 333 (489)
Q Consensus 264 ~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~----- 333 (489)
++|++||++||+|||++ +|||+|++ .++++|+.| ||+ |++|++|+ | |++++++++++.+...
T Consensus 241 ~lc~~~g~llI~DEV~t--GfGRtG~~~~~~~~gv~P---Div--t~gK~lgg-G~~Pi~av~~~~~i~~~~~~~~~~~~ 312 (451)
T PRK07678 241 EICQKHGALLISDEVIC--GFGRTGKAFGFMNYGVKP---DII--TMAKGITS-AYLPLSATAVKKEIYEAFKGKGEYEH 312 (451)
T ss_pred HHHHHcCCEEEEeehhh--cCCcCchhHHHHhcCCCC---CEE--Eeeccccc-CCcceeEEEEcHHHHHHHhccCcccc
Confidence 99999999999999999 99999976 778899999 999 99999987 4 7889999999988642
Q ss_pred -CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC
Q 046230 334 -CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP 408 (489)
Q Consensus 334 -~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~ 408 (489)
.+..+| ++||+.|++++++|+++ +.+++++++++++++|++.|+++ ++.......+.++.+.+..+
T Consensus 313 ~~h~~T~--~gnp~~~aaa~a~l~~l-------~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~ 383 (451)
T PRK07678 313 FRHVNTF--GGNPAACALALKNLEIM-------ENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVND 383 (451)
T ss_pred cccCCCC--CcCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecC
Confidence 233444 49999999999999999 44578899999999999999754 33322334467777777421
Q ss_pred ---------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 409 ---------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 ---------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....+...|+++||++.+ ..|++|...+++||+|++.+|++|||+++++++++++++
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~-~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGK-NGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEee-cCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 2245788999999999974 344455556899999999999999999999999998764
No 34
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=3e-41 Score=346.79 Aligned_cols=349 Identities=14% Similarity=0.164 Sum_probs=271.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+++++|+|+||+| |++|||| ++.+...++|+||+|++|+.+|+++...... . -.
T Consensus 34 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~---~~ 93 (451)
T PRK06062 34 INPMVIAGAEGSYVWDYE---------------GRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--A---HA 93 (451)
T ss_pred CCCceEEeceeeEEEECC---------------CCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--c---cC
Confidence 456779999999999999 9999999 4557788999899999999999998543321 1 13
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCeE----------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGATI---------- 209 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~~---------- 209 (489)
++...+|.++|++..+. +.+++.+||++|+..+++. .+++.++|.....+|+.+...+..++...
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 173 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG 173 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC
Confidence 67778999999998864 4666669999999655554 45667788888899998877666543211
Q ss_pred -EEe--cC---------CC-------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHH
Q 046230 210 -RVF--QH---------NT-------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAIC 266 (489)
Q Consensus 210 -~~~--~~---------~d-------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~ 266 (489)
..+ +. +| +++|+++|+.. .+.+.++||+||++++.|.+.| |++|+++|
T Consensus 174 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc 244 (451)
T PRK06062 174 VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE---------GPSTIAAILLESVPGTAGILVPPPGYLAGVRELC 244 (451)
T ss_pred CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEccccCCCCcccCCHHHHHHHHHHH
Confidence 111 11 22 45666666431 1246899999999999999977 99999999
Q ss_pred HHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh--CCCccc
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT--CPAHLY 339 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~--~~~~~~ 339 (489)
++||++||+|||++ +|||+|.+ .++++|+.| ||+ ||+|++|+ | |++++++++++.+... .++++|
T Consensus 245 ~~~g~lLI~DEV~t--GfGRtG~~~a~~~~gv~P---Di~--t~gK~lgg-G~~Pigav~~~~~i~~~~~~~~~~~~~T~ 316 (451)
T PRK06062 245 DRHGIVLIADEVMA--GFGRTGKWFAIEHFGVVP---DLI--TFAKGVNS-GYVPLGGVAISEAIAATFADRPYPGGLTY 316 (451)
T ss_pred HHcCCEEEeecccc--CCCcCcHHHHHHhcCCCC---Cee--eechhhhc-CCcCcEEEEEcHHHHHHhccCCCCCCCCC
Confidence 99999999999999 89999998 789999999 999 99999986 4 7788889999988643 244445
Q ss_pred ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH-HHHHHHHHhC--CCeee--CCCCCCeEEEEeCCCC-----
Q 046230 340 ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS-NFFRSELQKM--GFEVL--GDNDSPVMPIMLYNPA----- 409 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~~----- 409 (489)
+ +||+.|++++++|+++ +.+++++++++++ +++++.|+++ .++.+ ....+.++.+.+..+.
T Consensus 317 ~--gnpl~~Aaa~a~L~~l-------~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~ 387 (451)
T PRK06062 317 S--GHPLACAAAVATINAM-------EEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREP 387 (451)
T ss_pred C--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCC
Confidence 5 9999999999999999 4567899999998 5899999876 23322 2234566666664211
Q ss_pred ---------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 410 ---------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 410 ---------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....+.+.|+++||++.+ ..+.+||+||+.+|++|||+++++++++++.+.
T Consensus 388 ~~~~~~~~~~~~~~~~~l~~~Gvl~~~--------~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 388 LAPYGASSAAMAAVKAACKERGLLPFV--------NGNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CcccchhhHHHHHHHHHHHHCCcEEee--------cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 245788999999999762 136899999999999999999999999998754
No 35
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=2.6e-41 Score=345.21 Aligned_cols=346 Identities=18% Similarity=0.189 Sum_probs=276.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++.++.+++|.+++|.| |++||||+|+ ..+.++|+||++.+|+.+++++++.... . ..
T Consensus 18 ~~~~~~~~~~g~~~~~~~---------------g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~---~--~~ 77 (401)
T TIGR01885 18 PLPVVFSKAEGVHVWDVE---------------GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR---A--FY 77 (401)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc---c--cC
Confidence 456677899999999999 9999999763 3355777899999999999998764321 1 14
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc----------CCCCEEEEcCCC-chHHHHHHHhcC-------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM----------RKGSLIISDSLN-HNSIVNGARGSG------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~----------~~g~~Vl~~~~~-h~~~~~~~~~~g------- 206 (489)
++.+.+++++|+++++.+.+++++||++||..+++.+. ..++.|+++..+ |+++..++.+++
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTN 157 (401)
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccc
Confidence 67889999999999998889999999999977777642 224566666554 667777777653
Q ss_pred -----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 207 -----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
..+..++++|+++||+++++. +...++|++|++++++|.+.| |++|+++|++||+++|+||
T Consensus 158 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DE 227 (401)
T TIGR01885 158 FGPYVPGFKKIPYNNLEALEEALEDH----------GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADE 227 (401)
T ss_pred cCCCCCCceEeCCCCHHHHHHHHHhc----------CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 235668999999999988652 136788999999999999887 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ ++|++|++ ..+++++.| |++ ++||++++.| |++++++++++.+.......+++ .+|+.++++.+
T Consensus 228 v~~--g~g~~G~~~~~~~~~~~~---di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a 298 (401)
T TIGR01885 228 IQT--GLGRTGKLLCVDHENVKP---DIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVA 298 (401)
T ss_pred hhh--CCCccchhhHHhhcCCCC---CEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHH
Confidence 998 79999987 446677777 888 8999998633 78999999999887544444444 78999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC--CCCCCeEEEEeCCCC---cHHHHHHHHhhCCceEEee
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG--DNDSPVMPIMLYNPA---KIPAFSRECLRQNVAVVTV 428 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~--~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gi~v~~~ 428 (489)
+|+.+. .+++.++++++++++++.|++++.+++. ...+.+..+.+..+. ...+++++|.++||.+.+
T Consensus 299 ~L~~i~-------~~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~- 370 (401)
T TIGR01885 299 ALEVLE-------EEKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP- 370 (401)
T ss_pred HHHHHH-------hccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe-
Confidence 999983 3457788899999999999998644432 234677777775543 467899999999999973
Q ss_pred cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 429 AFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 429 ~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.+++||+|++.+|+++|++++++|++++
T Consensus 371 ------~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 371 ------THGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ------cCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 335789999999999999999999998875
No 36
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-41 Score=330.22 Aligned_cols=348 Identities=18% Similarity=0.186 Sum_probs=281.3
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+++||+| |++|||+ .++..+.++|+||.|++|+++++++ |.+++. .
T Consensus 34 ~~P~fi~~g~Ga~l~DvD---------------Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~-G~~fg~------P 91 (432)
T COG0001 34 GYPIFIERGKGAYLTDVD---------------GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER-GLSFGA------P 91 (432)
T ss_pred CCCeeEEeccCCeEEeCC---------------CCEeeehhccCcccccCCCCHHHHHHHHHHHHh-cCCCCC------C
Confidence 377889999999999999 9999999 6789999999999999999999998 444432 3
Q ss_pred chhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHh---HhhhcCCCCEEEEcCCCchHHHHHHHhc--C------------
Q 046230 145 LMVHNELEECVARFVGK-PAAIVFGMGYVTNSAI---LPVLMRKGSLIISDSLNHNSIVNGARGS--G------------ 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~---~~al~~~g~~Vl~~~~~h~~~~~~~~~~--g------------ 206 (489)
++...++++.|.+.++. |..-+++|||+|++.+ .++++++.++|.++..+|+..-..+--. |
T Consensus 92 te~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv 171 (432)
T COG0001 92 TELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV 171 (432)
T ss_pred CHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCC
Confidence 67778899999999987 7778889999998554 4557788888889999998754322211 1
Q ss_pred -----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 207 -----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
..+..+++||++++++++++. ++..++||+||+.+.-|.+.| |++|+++|++||++||+||
T Consensus 172 p~~~a~~ti~~~yND~~al~~~~~~~----------g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 172 PADVAKHTLVLPYNDLEALEEAFEEY----------GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred ChhhhccEEEecCCCHHHHHHHHHHc----------CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 245678999999999999874 358999999999999998866 8999999999999999999
Q ss_pred ccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccccc-CCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYAT-SISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~-~~~p~~~aa~~a 353 (489)
+++ +|.-.-.++.+++|++| |+. ||+|.+|+ | |++.+++++++.+......+.-+| ++||+.++|+.+
T Consensus 242 ViT--GFR~~~gGaq~~~gi~P---Dlt--tlGKiIGG-GlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~a 313 (432)
T COG0001 242 VIT--GFRVALGGAQGYYGVEP---DLT--TLGKIIGG-GLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLA 313 (432)
T ss_pred chh--hcccCCcccccccCcCc---chh--hhhhhhcC-CcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHH
Confidence 999 77655456889999999 999 99999998 7 999999999998877665444333 799999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHHH
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFSR 416 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~ 416 (489)
+|+.++. .+...+++.++++.|++.|++. |+++....-+.++.+.+.... ....+.+
T Consensus 314 tl~~l~~------~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~ 387 (432)
T COG0001 314 TLEELMT------EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFH 387 (432)
T ss_pred HHHHHHh------cccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHH
Confidence 9999841 1347888888888888888765 777765555667777776521 1335667
Q ss_pred HHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 417 ECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 417 ~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.|+++||++.|..|- ...+|.+||++|||+.+++++++++++.
T Consensus 388 ~~l~~GV~l~ps~~e---------a~flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 388 HLLNRGVYLAPSQFE---------AGFLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred HHHhCCcccCCcccc---------ceeeecccCHHHHHHHHHHHHHHHHHhh
Confidence 999999999964432 2245669999999999999999988764
No 37
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=318.36 Aligned_cols=344 Identities=17% Similarity=0.204 Sum_probs=283.3
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
+.|..+++++|+++||.+ |++|+|| ++|...+.+|+||.+.+++++|+++...++ |.. .
T Consensus 40 pLpvvf~ka~g~~vwD~e---------------Gk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss---raf--Y 99 (427)
T KOG1402|consen 40 PLPVVFSKAKGSRVWDPE---------------GKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS---RAF--Y 99 (427)
T ss_pred cCceEEEecCCcEEECCC---------------ccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh---HHH--h
Confidence 455667899999999999 9999999 778999999999999999999999865433 222 3
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc------C--C--CCEEE-EcCCCchHHHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM------R--K--GSLII-SDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~------~--~--g~~Vl-~~~~~h~~~~~~~~~~g~------ 207 (489)
+++..++++.+++++|.+..+-+++|.+|+..+++... + | ...|+ .....|+.+..++.+++-
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 67788999999999999999999999999966665543 1 1 22344 445556655555544432
Q ss_pred -------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 208 -------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
.+..++++|.++|+.+|++ ...+++++||+++..|.+.| |+++++||+||++++|+|
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~------------~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~D 247 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKS------------PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIAD 247 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcC------------CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEeh
Confidence 2556788999999999987 58899999999999998876 999999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQI 351 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~ 351 (489)
|+|+ ++||||+. ++++-++.| ||+ -|+|+|++ | ++++.+++++-.+....|+.+|+ +||+.|+++
T Consensus 248 EvQT--Gl~RTGk~la~d~env~P---Div--ilgKalSG-G~~Pvsavl~~~~im~~~~pgeHgsTyg--gNpLg~~va 317 (427)
T KOG1402|consen 248 EVQT--GLARTGKLLACDYENVRP---DIV--ILGKALSG-GVYPVSAVLADDDIMLNIKPGEHGSTYG--GNPLGCAVA 317 (427)
T ss_pred hhhh--cccccCcEEEeehhhcCC---CeE--EEeccccC-CeeeeEEEEecHHHHhccCCCccccccC--CChHHHHHH
Confidence 9999 99999998 889999999 999 89999987 7 77889999999999888988888 999999999
Q ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe---eeCCCCCCeEEEEeCC----CCcHHHHHHHHhhCC
Q 046230 352 ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE---VLGDNDSPVMPIMLYN----PAKIPAFSRECLRQN 422 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---v~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G 422 (489)
+++|++| ..+++.++.+.++..|+.+|.++ .++ .....++.+..+.+.. +..+.+++-.|.++|
T Consensus 318 iAalevi-------~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g 390 (427)
T KOG1402|consen 318 IAALEVI-------VEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENG 390 (427)
T ss_pred HHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccc
Confidence 9999999 67899999999999999999998 331 1223345555555542 234567888888899
Q ss_pred ceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 423 VAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 423 i~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
++.. |...+.+||+||+.++++|+++.++++.+.+.
T Consensus 391 ~LAk-------ptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 391 LLAK-------PTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cccC-------CCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 9877 34467999999999999999999999988763
No 38
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-41 Score=344.07 Aligned_cols=354 Identities=17% Similarity=0.196 Sum_probs=271.5
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
+|..+.+++|+|+||+| |++||||. +.+...++|+||+|.+|+.+|++++...... ...+
T Consensus 24 ~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~----~~~~ 84 (445)
T PRK08593 24 YPLVIDHGYGATLTDVD---------------GKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA----YMYH 84 (445)
T ss_pred CCceEEeeeeCEEEeCC---------------CCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc----ccCC
Confidence 56778999999999999 99999994 4577788888999999999999986543211 1236
Q ss_pred hhHHHHHHHHHHHhCCC---CEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCe-----------
Q 046230 146 MVHNELEECVARFVGKP---AAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (489)
+...+++++|++.++.. .+++.+||++|+..+++. .+++.++|..+..+|+.+...+.+++..
T Consensus 85 ~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~ 164 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLL 164 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCC
Confidence 77789999999998643 444559999999666553 4577778888999999987777665421
Q ss_pred --EEEecCCC----------H-------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHH
Q 046230 209 --IRVFQHNT----------P-------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAI 265 (489)
Q Consensus 209 --~~~~~~~d----------~-------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l 265 (489)
+..++.+| . +++++.+.... .+.+.++||+||++++.|.+.| |++|+++
T Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~l 236 (445)
T PRK08593 165 PGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL--------PADEVACIVIETIQGDGGLLEPVPGYFEALYKF 236 (445)
T ss_pred CCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc--------CCCceEEEEEccccCCCCCcCCCHHHHHHHHHH
Confidence 22233221 2 22333332210 0246899999999999998866 9999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhhCCCcccccC
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYTCPAHLYATS 342 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~~~~~~~~~~ 342 (489)
|++||++||+||+|+ +||++|++ .++++++.| ||+ |++|++|+ ++|++++++++++.+....+. ++.+
T Consensus 237 c~~~g~llI~DEv~t--g~GrtG~~~a~~~~gv~p---Di~--t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~--~T~~ 307 (445)
T PRK08593 237 CREHGILFAVDDIQQ--GLGRTGKWSSISHFNITP---DLM--SFGKSLAGGMPMSAIVGRKEIMESLEAPAHL--FTTG 307 (445)
T ss_pred HHHcCCEEEEechhh--CCCcCchHHHHHhcCCCC---CEe--eecccccCCcccEEEEEcHHHHhhhccCCCC--CCCC
Confidence 999999999999999 99999987 778899999 999 99999985 238999999999988643333 4555
Q ss_pred CCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCC--CCCCeEEEEeCCC--------Cc
Q 046230 343 ISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGD--NDSPVMPIMLYNP--------AK 410 (489)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~--~~~~~~~~~~~~~--------~~ 410 (489)
+||+.|++++++|+++ +.+++++++++++++|++.|+++ .++++++ ..+.++.+.+... ..
T Consensus 308 ~~pl~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~ 380 (445)
T PRK08593 308 ANPVSCAAALATIDMI-------EDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEA 380 (445)
T ss_pred CCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHH
Confidence 9999999999999999 45678999999999999999875 3333333 2344555555321 12
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
...+.+.|+++||++.+. +.+++||+|++.+|++|||+++++++++++++...
T Consensus 381 ~~~~~~~~~~~Gv~~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 381 ALKICNYCFEHGVVIIAV-------AGNVLRFQPPLVITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred HHHHHHHHHHCCeEEecc-------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 457889999999998732 23689999999999999999999999999887543
No 39
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-41 Score=346.48 Aligned_cols=349 Identities=17% Similarity=0.213 Sum_probs=269.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.++.++++++|+|+||.| |++||||+++++.+++|+||+|++|+.+|++++.... ++ -.+
T Consensus 53 ~~~~~i~~a~G~~l~D~d---------------G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~---~~~ 112 (459)
T PRK06082 53 PCLDVLASAEGIYIEDVD---------------GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RR---FTN 112 (459)
T ss_pred CCCceEEeeeeeEEEECC---------------CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Cc---cCC
Confidence 446788999999999999 9999999877888899999999999999999865432 11 136
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCeE-----------
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGATI----------- 209 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~~----------- 209 (489)
+...+|+++|+++++. +..++.+||++|+..+++. .+++..+|.+...+|+.+..++.+++...
T Consensus 113 ~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 192 (459)
T PRK06082 113 ETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAG 192 (459)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCC
Confidence 7889999999999864 3555669999999655554 35667788888999998877776654321
Q ss_pred -EEec--------CCC--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHc
Q 046230 210 -RVFQ--------HNT--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKY 269 (489)
Q Consensus 210 -~~~~--------~~d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~ 269 (489)
..++ .++ +++|++.+++ ....++||+||++++.+.+.| |++|+++|++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-----------~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~ 261 (459)
T PRK06082 193 VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK-----------EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH 261 (459)
T ss_pred CEEeCCCcccccccCChhHHHHHHHHHHHHHHhc-----------CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc
Confidence 1111 222 2345555542 136889999999998544444 99999999999
Q ss_pred CcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCC
Q 046230 270 KAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSIS 344 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~ 344 (489)
|++||+|||++ +|||+|++ +++++|+.| ||+ +++|++|+ | |++++++++.+.+.. ...+ ++.++|
T Consensus 262 g~llI~DEV~t--G~GRtG~~fa~e~~gv~P---Div--~~gKgl~g-G~~P~~av~~~~~i~~~~~~-~~~~-~T~~gn 331 (459)
T PRK06082 262 NVLLIIDEIPN--GMGRTGEWFTHQAYGIEP---DIL--CIGKGLGG-GLVPIAAMITKDKYNTAAQI-SLGH-YTHEKS 331 (459)
T ss_pred CCEEEEechhh--CCCccchhhHhHhhCCCC---CEE--EecccccC-CCCcceEEEEcHHHHhhccC-CCCC-CCCCcC
Confidence 99999999999 99999998 779999999 999 89999986 4 778888887754421 1112 344599
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCC--------cHH
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPA--------KIP 412 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~--------~~~ 412 (489)
|+.|++++++|+++ ..+++++++++++++|++.|+++ .++++. ...+.++.+.+..+. ...
T Consensus 332 pl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~ 404 (459)
T PRK06082 332 PLGCAAALATIEVI-------EQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAE 404 (459)
T ss_pred HHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHH
Confidence 99999999999999 44678999999999999999886 333332 234667777764221 144
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.+...|+++||++.+ .+.+.+||+|++.+|++|||++++++++++.++..
T Consensus 405 ~~~~~~~~~Gvl~~~-------~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 405 AVLYRCLNNGLSFKV-------SQGNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHHhCCCEEEe-------cCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 678889999999873 23478999999999999999999999999988743
No 40
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=2.5e-40 Score=334.18 Aligned_cols=345 Identities=24% Similarity=0.379 Sum_probs=285.6
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHh-------CCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKY-------SPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYV 172 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~-------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~ 172 (489)
.++|||+||||||++.+ |.+.+++.+++++| +.+.++++...|..+.+.++|++||++++.++++++++|+.
T Consensus 4 ~~~~~~~s~~YL~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~ 82 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRS-DTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYM 82 (370)
T ss_pred CceEEeECCCccCCCCC-HHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHH
Confidence 56999999999999976 88999999999998 57888999999999999999999999999999999999999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
+|..++..+.++++.|+++..+|+++..+++........++++|+++|+++|+..... ++++++|++++++++
T Consensus 83 a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-------~~~~~~v~v~~v~s~ 155 (370)
T PRK05937 83 ANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR-------SFGRIFIFVCSVYSF 155 (370)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc-------CCCcEEEEEecCCCC
Confidence 9987777777889999999999999999998876666778999999999999753111 124567888999999
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHh
Q 046230 253 EGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKY 332 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~ 332 (489)
+|.+.|+++|.++|+++|+++++||+|++|.+|++|++.+..++.. +.++++.||||++|+.|+.+++.+++.+.+..
T Consensus 156 ~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~ 233 (370)
T PRK05937 156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLML 233 (370)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHHH
Confidence 9999999999999999999999999999999999998865556653 22456679999999888777787877777765
Q ss_pred hCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHH
Q 046230 333 TCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412 (489)
Q Consensus 333 ~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~ 412 (489)
...++.++.+.+|+.++++.++++.+.. ..+..+++++++.+++++.|...+ .++..|+.+.. ....
T Consensus 234 ~~~~~~~s~~~~~~~~~a~~aal~~l~~-----~~~~~~~~l~~l~~~l~~~l~~~~-------~~~~~~i~~~~-~~~~ 300 (370)
T PRK05937 234 NSPPLRYSTGLPPHLLISIQVAYDFLSQ-----EGELARKQLFRLKEYFAQKFSSAA-------PGCVQPIFLPG-ISEQ 300 (370)
T ss_pred hCCCCeecCCCCHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHhcCCCC-------CCCEEEEEeCC-hhHH
Confidence 5556667777899999889999998843 235567888888889988775431 13345565543 3456
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
.+.+.|.++||.+....+|.. +.+|++++..+|++|||+++++|++++++++.++
T Consensus 301 ~~~~~L~~~gi~v~~~~~~~~----~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~~ 355 (370)
T PRK05937 301 ELYSKLVETGIRVGVVCFPTG----PFLRVNLHAFNTEDEVDILVSVLATYLEKYQKNV 355 (370)
T ss_pred HHHHHHHHCCeeEEeeCCCCC----CEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 788899999999887666643 5799999999999999999999999998876544
No 41
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=8.2e-41 Score=341.56 Aligned_cols=346 Identities=16% Similarity=0.112 Sum_probs=275.8
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
.++|..+.+++|+|+||.| |++||||+|+ +...++++||++.+++.++++++.... .. .
T Consensus 20 ~~~~~~~~~~~G~~~~d~d---------------G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~----~~-~ 79 (403)
T PRK05093 20 APAEFIPVRGEGSRVWDQQ---------------GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS----NV-F 79 (403)
T ss_pred CCCCeeEEEeecCEEEeCC---------------CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc----Cc-c
Confidence 3678888999999999999 9999999664 333444467999999999998854221 11 2
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhc---------
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGS--------- 205 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~--------- 205 (489)
.++.+.+++++|+++.+.+++++++||++||..+++.. .++.++|.++..+|+++.....+.
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 45667899999999988788899999999997777654 246678889999999887554432
Q ss_pred ---CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 046230 206 ---GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 206 ---g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa 278 (489)
...+..+++||++++++.+.+ +.++|++||++++.|.+.+ +++|+++|++||+++|+||+
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~-------------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv 226 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDD-------------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEV 226 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 234567889999999987743 5678999999998887644 99999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ ++|++|++ ..++++++| |+. ||||++++ | |++++++++++.+....+..+++ ++|+.++++.++
T Consensus 227 ~~--g~g~~g~~~~~~~~~~~p---di~--s~sK~l~~-G~rig~vv~~~~i~~~l~~~~~~~t~~--~~~~~~~aa~a~ 296 (403)
T PRK05093 227 QT--GMGRTGDLFAYMHYGVTP---DIL--TSAKALGG-GFPIGAMLTTAEIASHFKVGTHGSTYG--GNPLACAVAEAV 296 (403)
T ss_pred hh--CCCCCccchhhhhcCCCC---CEE--EecccccC-CcceEEEEEcHHHHhhcCCCCCCCCCC--CCHHHHHHHHHH
Confidence 99 79999986 446778888 877 99999985 7 99999999999887654544444 899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC--e--eeCCCCCCeEEEEeCCCC--cHHHHHHHHhhCCceEEee
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGF--E--VLGDNDSPVMPIMLYNPA--KIPAFSRECLRQNVAVVTV 428 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~--v~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi~v~~~ 428 (489)
|+.+ ..++..++++++++++.+.|++++. . ...+..+.++++.+.... ...+|++.|+++||.+.+
T Consensus 297 L~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~- 368 (403)
T PRK05093 297 FDII-------NTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLV- 368 (403)
T ss_pred HHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEec-
Confidence 9987 3456778999999999999998732 2 222234666777765432 466899999999999883
Q ss_pred cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 429 AFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 429 ~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.+++||+|++.+|+++|++++++|.++++.+
T Consensus 369 ------~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 369 ------AGPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred ------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 234789999999999999999999999988654
No 42
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-41 Score=344.29 Aligned_cols=349 Identities=15% Similarity=0.102 Sum_probs=267.6
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..+++++|+|+||.| |++|||| ++.+...++|+||+|++|+.+|+++........ .-.++
T Consensus 29 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~---~~~~~ 90 (459)
T PRK05965 29 VTVLASAKGATLTDAS---------------GHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYF---HFGSE 90 (459)
T ss_pred CceEEeeeEeEEEECC---------------CCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccccc---ccCCH
Confidence 5678999999999999 9999999 455778899999999999999999854322110 11356
Q ss_pred hHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCC--------
Q 046230 147 VHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGA-------- 207 (489)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (489)
...+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+..+...++.
T Consensus 91 ~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~ 170 (459)
T PRK05965 91 PAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFD 170 (459)
T ss_pred HHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccC
Confidence 678899999998753 455555899999966655432 1344677888889887655554432
Q ss_pred ------eEEEecC-------CCH--------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHH
Q 046230 208 ------TIRVFQH-------NTP--------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEI 262 (489)
Q Consensus 208 ------~~~~~~~-------~d~--------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i 262 (489)
...+++. +|. +++++.+... .+.+.++||+||+++..|.+.| |++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---------~~~~iAAvIvEPiqg~gG~~~p~~~yl~~l 241 (459)
T PRK05965 171 LPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL---------GADNVAAFFCEPIQGSGGVIVPPKGWLKAM 241 (459)
T ss_pred CCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEeccccCCCCccCCHHHHHHH
Confidence 1111121 232 4556656431 1247899999999998887754 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh----
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT---- 333 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~---- 333 (489)
+++|++||++||+|||++ +|||+|.+ .++++|+.| ||+ +++|++|+ | |++++++++++.+...
T Consensus 242 r~lc~~~gillI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~g-G~~Pi~av~~~~~i~~~~~~~~~~~ 313 (459)
T PRK05965 242 REACRELGILFVADEVIT--GFGRTGPLFACEAEGVVP---DLM--TVAKGLTS-GYVPMGAVLMSDHVYQGIADGAGAA 313 (459)
T ss_pred HHHHHHcCCEEEEechhc--cCccCchhhhHhhcCCCC---CeE--Eechhhcc-CCcceeEEEEcHHHHHHHhcccccc
Confidence 999999999999999999 99999998 889999999 999 99999987 5 8889999999888532
Q ss_pred ---CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEEEeCC
Q 046230 334 ---CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYN 407 (489)
Q Consensus 334 ---~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~~~~~ 407 (489)
.++++|+ +||+.|++++++|+++ +.+++.+++++++++|+++|+++ .++++++ ..+.++.+.+..
T Consensus 314 ~~~~h~~T~~--gnpl~~Aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~ 384 (459)
T PRK05965 314 APVGHGYTYS--AHPVSAAVGLEVLRLY-------HEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVA 384 (459)
T ss_pred ccccccCCCC--CCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEec
Confidence 2344444 9999999999999999 56789999999999999999886 3333222 335666666632
Q ss_pred CC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 408 PA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 408 ~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. ....+.+.|+++||++.+ .+.+.+|++||+.+|++||++++++|+++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~-------~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 385 DKATKTPFDAALDPADRIFDRAYANGLVFRA-------FGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred cccccCCCCchhHHHHHHHHHHHhCCeEEEe-------cCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 11 245688899999999873 344789999999999999999999999999876
No 43
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=1.3e-40 Score=344.49 Aligned_cols=349 Identities=15% Similarity=0.170 Sum_probs=275.2
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
+++..+.+++|.|+||+| |++||||+| +..+.++|+||+|++|+.+++.++..... . -.
T Consensus 56 ~~p~~~~~a~G~~l~d~d---------------G~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~--~---~~ 115 (474)
T PLN02624 56 PIPVVFSRAKGSRIWDPE---------------GKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR--A---FY 115 (474)
T ss_pred CCCceEEeeeeCEEEECC---------------CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc--c---cC
Confidence 446778999999999999 999999955 45567888899999999999999764431 1 23
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC-----------CCCEEEEcCCCchHHHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR-----------KGSLIISDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~-----------~g~~Vl~~~~~h~~~~~~~~~~g~------ 207 (489)
++...+|+++|+++++.+.+++++||++||..+++.... +..+|.....+|+.+...+.+++-
T Consensus 116 ~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 195 (474)
T PLN02624 116 NDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRG 195 (474)
T ss_pred CHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcccccc
Confidence 677899999999999888888899999999666654321 113455667778776665554321
Q ss_pred ------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 208 ------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
.+..++++|++.+++.++.. +.+.++|++|++++++|.+.| |++|+++|++||+++|+||
T Consensus 196 ~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DE 265 (474)
T PLN02624 196 FGPLLPGHLKVDFGDLDALEKIFEED----------GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265 (474)
T ss_pred CCCCCCCceEeCCCCHHHHHHHHHhC----------CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 23457888999999988642 246789999999999999877 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ ++|++|.+ ..+++++.| |++ +|||++|+.+ |++++++++++.+....++.+|+ ++|+.++++.+
T Consensus 266 v~t--G~GrtG~~~a~~~~~i~p---Div--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~--g~pl~~aaa~a 336 (474)
T PLN02624 266 IQT--GLARTGKMLACDWEEVRP---DVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFG--GNPLASAVAMA 336 (474)
T ss_pred ccc--CcCcCcchhhHHhcCCCC---CEE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCCC--CCHHHHHHHHH
Confidence 999 79999987 556788887 999 8999998743 88899999988876555444444 99999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ce-eeC--CCCCCeEEEEeCCC----CcHHHHHHHHhhCCce
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FE-VLG--DNDSPVMPIMLYNP----AKIPAFSRECLRQNVA 424 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-v~~--~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~ 424 (489)
+|+.+ ..+++.+++.++++++++.|+++. ++ .+. ...+.++++.+..+ ....++++.|+++||+
T Consensus 337 aLe~l-------~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~ 409 (474)
T PLN02624 337 ALQVV-------QDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLL 409 (474)
T ss_pred HHHHH-------HhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeE
Confidence 99988 345678888999999999998862 32 111 23466777766542 2356789999999999
Q ss_pred EEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 425 VVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 425 v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+ .+.+++||+|++.+|++||++++++|+++++.-
T Consensus 410 v~p-------~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 410 AKP-------THDTIIRLAPPLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred Eec-------CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 983 345789999999999999999999999988664
No 44
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-41 Score=345.44 Aligned_cols=355 Identities=16% Similarity=0.189 Sum_probs=270.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++||||. +.+...++|+||+|.+|+.+|++++..... ....
T Consensus 37 ~~p~~i~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~~~~ 97 (443)
T PRK06058 37 TLPVYVARAGGGIVEDVD---------------GNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCF----MVTP 97 (443)
T ss_pred CCCceEEeeeeeEEEeCC---------------CCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccc----cccC
Confidence 356788999999999999 99999994 457788888899999999999998542221 1124
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHhcCC-----------
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARGSGA----------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (489)
++...++.++|++.++. +..++++||++|+..+++ ..+++..+|.....+|+.+...+.+++.
T Consensus 98 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~ 177 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPF 177 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCC
Confidence 67778999999998763 356677999999966665 4567777777888899888776655431
Q ss_pred --eEEE----ecCCCH--------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 046230 208 --TIRV----FQHNTP--------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKY 269 (489)
Q Consensus 208 --~~~~----~~~~d~--------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~ 269 (489)
.+.. ++.++. +.+++.++...... .+.+.++||+||+++..|.+.| |++|+++|++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~ 252 (443)
T PRK06058 178 APEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV-----GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN 252 (443)
T ss_pred CCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh-----CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 0111 122221 22222222111000 0247899999999998888764 99999999999
Q ss_pred CcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCH
Q 046230 270 KAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISP 345 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p 345 (489)
|+++|+|||++ +|||+|.+ .++++|+.| ||+ +++|++|+ | |++++++++++.+....+..+|+ +||
T Consensus 253 gillI~DEV~t--GfgRtG~~fa~~~~gv~P---Div--~~gK~l~~-G~Pi~av~~~~~i~~~~~~~~~~~T~~--gnp 322 (443)
T PRK06058 253 GVVFIADEVQT--GFARTGAWFACEHEGIVP---DLI--TTAKGIAG-GLPLSAVTGRAEIMDAPHPGGLGGTYG--GNP 322 (443)
T ss_pred CCEEEEecccc--CCCcChhhhHHHhcCCCC---CEE--EEcccccC-CCccEEEEEcHHHHhhccCCCCCCCCC--CCH
Confidence 99999999999 99999987 778999999 999 99999986 7 89999999999887665555555 999
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCC-------CcHHHH
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNP-------AKIPAF 414 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~-------~~~~~~ 414 (489)
+.|++++++|+++ ..+++.+++++++++|+++|+++ .++++ ....+.++.+.+..+ .....+
T Consensus 323 l~~aaa~a~L~~~-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l 395 (443)
T PRK06058 323 VACAAALAAIETI-------EEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKAL 395 (443)
T ss_pred HHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHH
Confidence 9999999999998 45678999999999999999885 23332 233466666666332 124568
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.|+++||++.+.+ + ..+++||.||+.+|++|||+++++|++++++
T Consensus 396 ~~~~~~~Gv~~~~~~----~-~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 396 AAAAHAAGVIVLTCG----T-YGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHCCeEEeccC----C-CCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 888999999997421 1 1368999999999999999999999999865
No 45
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=8.7e-41 Score=344.21 Aligned_cols=355 Identities=15% Similarity=0.144 Sum_probs=271.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++||||. +.+...++|+||++++|+.+|+++++.....+. ..
T Consensus 29 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~---~~ 90 (460)
T PRK06105 29 EGPLVIERGEGIYVYDDA---------------GKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSH---KS 90 (460)
T ss_pred cCCceEEeeeEEEEEECC---------------CCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccc---cC
Confidence 356788999999999999 99999995 456788999899999999999998654322111 24
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...+++++|++.++. +.+++.+||++|+.++++.. .++.++|.....+|+.+..+..+++..
T Consensus 91 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~ 170 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRS 170 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccc
Confidence 67778999999999864 35666699999997776653 134456777888999887665544421
Q ss_pred -------EEEecCCC------------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----h
Q 046230 209 -------IRVFQHNT------------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----F 259 (489)
Q Consensus 209 -------~~~~~~~d------------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l 259 (489)
+..++.++ .+++|+++... .+.+.++||+||++++.|.+.+ |
T Consensus 171 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~---------~~~~iAavIvEPiqg~gG~~~~~~~yl 241 (460)
T PRK06105 171 FDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE---------GPDTIAAFIGEPVMGAGGVIVPPKTYW 241 (460)
T ss_pred cCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc---------CCCceEEEEEccccCCCCCccCCHHHH
Confidence 11122111 24566665421 1246899999999999998876 9
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhhCC
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYTCP 335 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~~~ 335 (489)
++|+++|+|||+++|+||+++ +|||+|++ .++++++.| ||+ +++|++|+ +.|++++++++++.+.....
T Consensus 242 ~~lr~lc~~~~~llI~DEv~t--G~GRtG~~f~~~~~~v~P---Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~ 314 (460)
T PRK06105 242 EKIQAVLRKYDILLVADEVIC--GFGRTGNMFGCETFGIKP---DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESG 314 (460)
T ss_pred HHHHHHHHHcCCeEEEecccc--CCCcCchhhhHHhcCCCC---Cee--eeecccccCcccceEEEEcHHHHHHHhcccc
Confidence 999999999999999999999 99999998 778999999 999 99999975 24889999999998864321
Q ss_pred -----CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCC
Q 046230 336 -----AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYN 407 (489)
Q Consensus 336 -----~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~ 407 (489)
.+.++.++||+.|++++++|+++ ..+++++++++++++|+++|+++ .++++. ...+.++.+.+..
T Consensus 315 ~~~~~~h~~T~~gnpl~~aaa~a~L~~i-------~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~ 387 (460)
T PRK06105 315 KIGTFGHGFTASGHPVAAAVALENLAII-------EERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVA 387 (460)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEec
Confidence 12334459999999999999999 45688999999999999999887 233222 2336666666632
Q ss_pred CC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 408 PA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 408 ~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
+. ....+.+.|+++||++.+ . .+.+||+|++.+|++|||+++++|+++++++..
T Consensus 388 ~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~-------~-g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 388 DKATKTPFEPPGKVGARANAAAHEHGVISRA-------M-GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CcccCCCCCchhHHHHHHHHHHHHCCeEEEe-------c-CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 11 135688899999999973 1 268999999999999999999999999987643
No 46
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=342.23 Aligned_cols=350 Identities=15% Similarity=0.149 Sum_probs=266.5
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+.+|.+++|+|+||.| |++||||. +.+...++|+||+|++|+.+|+++....... ....++
T Consensus 33 p~~i~~a~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~---~~~~~~ 94 (461)
T PRK07482 33 GRIVEGGEGIRITDAQ---------------GRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY---VGHGTE 94 (461)
T ss_pred CeeEEeeeeeEEEECC---------------CCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc---cccCCH
Confidence 5678999999999999 99999994 4577888888999999999999985422110 012367
Q ss_pred hHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-------
Q 046230 147 VHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------- 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (489)
...+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+.....+++..
T Consensus 95 ~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~ 174 (461)
T PRK07482 95 ASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccC
Confidence 778999999998853 466677999999966666542 24456667788888766555444311
Q ss_pred -----EEE--ecC--C--------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHH
Q 046230 209 -----IRV--FQH--N--------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPE 261 (489)
Q Consensus 209 -----~~~--~~~--~--------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~ 261 (489)
+.. ++. + ++++|++.+... .+...++||+||+++..|.+.+ +++
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~iAAvi~EPvqg~gG~~~~~~~yl~~ 245 (461)
T PRK07482 175 LPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE---------GPDTIAAFIAEPVLGTGGIVPPPAGYWPA 245 (461)
T ss_pred CCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEECCccCCCCCcCCCHHHHHH
Confidence 111 111 1 245566666421 1247899999999998887754 899
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh---
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT--- 333 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~--- 333 (489)
|+++|++||++||+|||++ +|||+|++ .++++|+.| ||+ +++|++++ | |++++++++++.+...
T Consensus 246 lr~lc~~~giLlI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~g-G~~Pi~av~~~~~i~~~~~~~~~~ 317 (461)
T PRK07482 246 IQAVLKKYDILLIADEVVT--GFGRLGSMFGSDHYGIEP---DLI--TVAKGLTS-AYAPLSGSIVGEKVWDVLEQGSDE 317 (461)
T ss_pred HHHHHHHhCCEEEEecccc--CCCcCcchhhHHhcCCCC---CEE--EEcccccc-CccccceeeecHHHHHHHhccccc
Confidence 9999999999999999999 99999998 889999999 999 99999976 4 7788899998887632
Q ss_pred ----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEe
Q 046230 334 ----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIML 405 (489)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~ 405 (489)
.++++|+ +||+.|++++++|+++ +.+++.+++++++++|++.|+++ .++++ ....+.++.+.+
T Consensus 318 ~~~~~h~~T~~--gnpl~~Aaa~a~L~~~-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel 388 (461)
T PRK07482 318 HGAIGHGWTYS--GHPICAAAALANLDIL-------ERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEF 388 (461)
T ss_pred CCccccCCCCC--cCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEe
Confidence 2334444 9999999999999999 55778999999999999999865 33322 233466777766
Q ss_pred CCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 406 YNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 406 ~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.... ....+...|+++||++.+. + ..+.+||.||+.+|++||++++++++++++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-----~-~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 389 VADRDDRTPFDPALKIGPQVSAAALERGVIARAM-----P-HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred ccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC-----C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4211 1357889999999998621 1 24789999999999999999999999999875
No 47
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=8.3e-41 Score=340.32 Aligned_cols=342 Identities=14% Similarity=0.157 Sum_probs=267.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||+| |++||||.| .+...++|+||++.+|+.+++++...... ...
T Consensus 12 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-----~~~ 71 (389)
T PRK01278 12 RADLAFERGEGVWLIDED---------------GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN-----LYR 71 (389)
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc-----ccC
Confidence 457788999999999999 999999965 33345555689999999999988432221 124
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCe-------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGAT------- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (489)
++.+.+++++|+++.+.+++++++||++|+..+++++ .++.++|..+..+|+........++..
T Consensus 72 ~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 151 (389)
T PRK01278 72 IPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG 151 (389)
T ss_pred ChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC
Confidence 6778999999999987778888899999997777765 223346667777787776665554432
Q ss_pred -----EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccc
Q 046230 209 -----IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 209 -----~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa~ 279 (489)
+..++++|++++++.+.. +.++|++|++++++|... ++++|+++|++||++||+||+|
T Consensus 152 ~~~~~~~~~~~~d~~~l~~~l~~-------------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 218 (389)
T PRK01278 152 PLVPGFDQVPFGDIEALKAAITP-------------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQ 218 (389)
T ss_pred CCCCCceEeCCCCHHHHHHhhCC-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 224577899999988753 567899999999988543 5999999999999999999999
Q ss_pred ccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHH
Q 046230 280 SIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAI 355 (489)
Q Consensus 280 s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L 355 (489)
+ ++|++|++ ..+++++.| |++ ||||++++ | |++++++++++.+....+..+++ .||+.+++++++|
T Consensus 219 ~--g~g~~g~~~~~~~~~~~p---di~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l 288 (389)
T PRK01278 219 C--GMGRTGKLFAHEWAGVTP---DIM--AVAKGIGG-GFPLGACLATEEAAKGMTPGTHGSTYG--GNPLAMAVGNAVL 288 (389)
T ss_pred c--CCCcCCcceeecccCCCC---CEE--EEehhccC-CcceEEEEEcHHHHhccCCCCCCCCCC--ccHHHHHHHHHHH
Confidence 9 89999986 556778888 887 99999985 6 99999999999887666655555 9999999999999
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe-eeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE-VLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF 430 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 430 (489)
+.+ ..++..+++++++++++++|+++ ..+ +.. ...+.++++.+. ....+++++|+++||.+.|
T Consensus 289 ~~l-------~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~--~~~~~~~~~l~~~GV~~~p--- 356 (389)
T PRK01278 289 DVI-------LAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV--VPNRDLVQALRDEGLLTVG--- 356 (389)
T ss_pred HHH-------hhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe--cCHHHHHHHHHHCCeEEee---
Confidence 988 44567788899999999988875 122 221 223555555443 2567899999999999884
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.+++||+|++.+|+++|++++++|+++++.
T Consensus 357 ----~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 357 ----AGDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred ----cCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 23578999999999999999999999998864
No 48
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=6.1e-41 Score=341.58 Aligned_cols=344 Identities=13% Similarity=0.128 Sum_probs=266.7
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
.++++++|+|+||.| |++||||.+ .+...++|+||++.+|+.+|+++....... .-.++.
T Consensus 27 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~ 87 (428)
T PRK07986 27 YPVVSAEGCELILAD---------------GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG----GITHPP 87 (428)
T ss_pred eeEEeeeeeEEEeCC---------------CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc----ccCCHH
Confidence 578999999999999 999999954 466778888999999999999986533211 113677
Q ss_pred HHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc--------CCCCEEEEcCCCchHHHHHHHhcCCe---------
Q 046230 148 HNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM--------RKGSLIISDSLNHNSIVNGARGSGAT--------- 208 (489)
Q Consensus 148 ~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~--------~~g~~Vl~~~~~h~~~~~~~~~~g~~--------- 208 (489)
..+|.++|++.++. +..++.+||++|+..+++... ++.++|.....+|+.+...+.+++..
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 167 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKG 167 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCC
Confidence 78999999998864 456666999999966655432 34567778888898776655543311
Q ss_pred ----EEEe-----------cCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCC----CChHHHHHHHHH
Q 046230 209 ----IRVF-----------QHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGEL----CKFPEIIAICKK 268 (489)
Q Consensus 209 ----~~~~-----------~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~----~~l~~i~~l~~~ 268 (489)
+..+ .++|++++++.++.. +.+.++|++||+ ++..|.+ .+|++|+++|++
T Consensus 168 ~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~----------~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~ 237 (428)
T PRK07986 168 YLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH----------RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDR 237 (428)
T ss_pred CCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC----------CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH
Confidence 1111 235667788777642 246889999997 4444543 339999999999
Q ss_pred cCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhC-----CCcc
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTC-----PAHL 338 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~-----~~~~ 338 (489)
||++||+||+|+ ++||+|++ +++++|++| ||+ +++|++++ | |++++++++++.+.... ++.+
T Consensus 238 ~g~lLI~DEv~t--G~GrtG~~fa~~~~gv~P---Di~--t~gK~l~g-G~~p~~av~~~~~i~~~~~~~~~~~~~~~~T 309 (428)
T PRK07986 238 EGILLIADEIAT--GFGRTGKLFACEHAGIAP---DIL--CLGKALTG-GTMTLSATLTTREVAETISNGEAGCFMHGPT 309 (428)
T ss_pred cCCEEEEecccc--CCccCCCeeeecccCCCC---CEE--EechhhhC-CcccCcchhchHHHHHHhhcCCCCccccCCC
Confidence 999999999998 89999998 789999999 999 89999974 4 66688999999987532 4445
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEEEeCCCCcHHHHH
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~~~~~~~~~~~~~ 415 (489)
|+ +||+.|++++++|+++ +.+++++++++++++|++.|+++ ..+.+++ ..+.++++.+..+.....+.
T Consensus 310 ~~--g~p~~~aaa~a~L~~i-------~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~ 380 (428)
T PRK07986 310 FM--GNPLACAVANASLSLL-------ESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQ 380 (428)
T ss_pred CC--cCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHH
Confidence 55 9999999999999999 44578999999999999999986 3333222 34677888777665567899
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.|+++|+++.+ .+ +.+||+||+.+|++||++++++|++++++
T Consensus 381 ~~l~~~Gl~~~~-------~g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 381 RFFVEQGVWIRP-------FG-KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHCCcEEEe-------cC-CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999873 22 68999999999999999999999999864
No 49
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.1e-40 Score=338.48 Aligned_cols=348 Identities=14% Similarity=0.152 Sum_probs=264.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|++++...... ...+
T Consensus 28 ~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~----~~~~ 88 (442)
T PRK13360 28 APRLLVAAKGMYYTTHD---------------GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF----QMGH 88 (442)
T ss_pred CCceEEeeeeeEEEeCC---------------CCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC----CcCC
Confidence 46788999999999999 99999994 4466778888999999999999986543311 1236
Q ss_pred hhHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe------
Q 046230 146 MVHNELEECVARFVG--KPAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (489)
+...++.++|++.++ .+.+.+.+||++|+..+++... ++..+|.....+|+.+...+..+|..
T Consensus 89 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~ 168 (442)
T PRK13360 89 PKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAF 168 (442)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhcc
Confidence 777899999999875 3566677999999966655422 23456667788888776655444311
Q ss_pred ------EEEecCC-C-----------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 209 ------IRVFQHN-T-----------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~~~-d-----------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
+..++.. + .++||++++.. .+.+.++|++|+++++.|.+.| |+
T Consensus 169 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~~aavivEpi~g~~G~~~~~~~fl~ 239 (442)
T PRK13360 169 GALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH---------DASTIAAVIVEPVAGSTGVLIPPKGYLQ 239 (442)
T ss_pred CCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc---------CCCcEEEEEEccccCCCCCccCCHHHHH
Confidence 1112222 1 34666666531 1247899999999999999988 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh--
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT-- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~-- 333 (489)
+|+++|++||++||+||+|+ +|||+|++ .++++|+.| ||+ ||+|++++ | |++++++++++.+...
T Consensus 240 ~lr~lc~~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--t~gK~l~g-G~~P~gav~~~~~i~~~~~~~~~ 311 (442)
T PRK13360 240 RLREICDKHGILLIFDEVIT--GFGRLGAPFAAQYFGVTP---DLL--TCAKGLTN-GAIPMGAVFVSSEIHDAFMQGPE 311 (442)
T ss_pred HHHHHHHHcCCEEEEechhh--CCCCCccchhhhhcCCCC---cee--eeeecccc-CccceEEEEEcHHHHHHhhcCCc
Confidence 99999999999999999999 99999997 778999999 999 99999976 3 7788999999887642
Q ss_pred -----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCC--CCeEEEEe
Q 046230 334 -----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGDND--SPVMPIML 405 (489)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~~~--~~~~~~~~ 405 (489)
.++++|+ +||+.|++++++|+++ +.++++++++++++++++.|+++. ++.+.+.+ +.+..+.+
T Consensus 312 ~~~~~~~~~T~~--g~pl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l 382 (442)
T PRK13360 312 AGIEFFHGYTYS--GHPLACAAALATLDLY-------EREGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVEL 382 (442)
T ss_pred cccccccCCCCC--CCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEE
Confidence 1334444 9999999999999999 445688999999999999998762 33222222 33334444
Q ss_pred CC-----CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 406 YN-----PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 406 ~~-----~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. .....++.+.|+++||++.+ ..+++||+|++.+|++|||+++++|+++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~Gvl~~~--------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 383 APRDGKPGKRAYEVFLKCFEKGLMIRY--------TGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ecCCCCcchhHHHHHHHHHHCCcEEEe--------cCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 22 12345788899999999873 12689999999999999999999999998764
No 50
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.9e-40 Score=339.37 Aligned_cols=347 Identities=16% Similarity=0.177 Sum_probs=268.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+..+++++|+|+||.| |++||||. +.+...++|+||++.+|+.+|++++....... -.+
T Consensus 36 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~----~~~ 96 (453)
T PRK06943 36 PLLPVARGEGAWLYDRD---------------GRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAG----CTH 96 (453)
T ss_pred CCceEEecccCEEEeCC---------------CCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccc----cCC
Confidence 35678999999999999 99999995 45778889889999999999999865433211 136
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCe------
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (489)
+...+|.++|++..+. +.+++.+||++|+..+++.. .++..+|.....+|+.+...+.+++..
T Consensus 97 ~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~ 176 (453)
T PRK06943 97 EPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAY 176 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhccc
Confidence 6778999999998874 35666699999997666654 134456777888888776666554421
Q ss_pred ------EEEecCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC----hH
Q 046230 209 ------IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~~~-----------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~----l~ 260 (489)
+..++.. ++++++++++.. +.+.++||+|| +++..|.+.+ |+
T Consensus 177 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~iAAviiEPvvqg~gG~~~~~~~yl~ 246 (453)
T PRK06943 177 DPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER----------AGKIAALIVEPLVQCAAGMAMHDPSYLR 246 (453)
T ss_pred ccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEeccccccCCcccCCHHHHH
Confidence 1112211 235666666531 25789999999 4888887644 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh--
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT-- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~-- 333 (489)
+|+++|++||++||+||+++ +|||+|++ .++++|+.| ||+ +++|++++ | |++++++++++.+...
T Consensus 247 ~lr~lc~~~gillI~DEV~T--G~GRtG~~fa~~~~gv~P---Div--t~gKgl~g-G~~Pi~av~~~~ei~~~~~~~~~ 318 (453)
T PRK06943 247 GLRALCDRYGVHLIADEIAV--GCGRTGTFFACEQAGVWP---DFL--CLSKGISG-GYLPLSLVLSRDAIFAAFYDDDV 318 (453)
T ss_pred HHHHHHHHcCCEEEeechhh--CCCCCcchhHHHhCCCCC---CeE--eeehhhcc-CcccceEEEEcHHHHHhhcccCc
Confidence 99999999999999999999 99999987 789999999 999 99999986 5 8889999999888532
Q ss_pred ----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeC
Q 046230 334 ----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLY 406 (489)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~ 406 (489)
.++.+|+ +||+.|++++++|+++ +.+++.+++++++++|+++|+++ ..+.++ ...+.++.+.+.
T Consensus 319 ~~~~~~~~T~~--gnpl~~aaa~a~L~~i-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~ 389 (453)
T PRK06943 319 TRGFLHSHSYT--GNPLACRAALATLDLF-------AEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVA 389 (453)
T ss_pred cCCccCCCCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEc
Confidence 1333444 9999999999999999 55678999999999999999886 222222 234666777664
Q ss_pred CC-C----cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 407 NP-A----KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 407 ~~-~----~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+ . ....+.+.|+++||++.+ .+ +.+||+||+.+|++|||+++++|+++++++
T Consensus 390 ~~~~~~~~~~~~i~~~~~~~Gll~~~-------~g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 390 LDGDAARTFSRRFFEAALERELLLRP-------IG-TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred cCCCcchHHHHHHHHHHHHCCcEEEe-------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 21 1 245688999999999873 22 579999999999999999999999999875
No 51
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-40 Score=339.14 Aligned_cols=344 Identities=14% Similarity=0.145 Sum_probs=267.4
Q ss_pred CccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhH
Q 046230 70 PISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVH 148 (489)
Q Consensus 70 ~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (489)
++.+++|+|+||.| |++||||.+ .+...++|+||++.+|+.+|++++...... .-.++..
T Consensus 29 ~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~~ 89 (429)
T PRK06173 29 PVERADGVMITLKD---------------GRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFG----GFTHEPA 89 (429)
T ss_pred eEEeceeeEEEcCC---------------CCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHHH
Confidence 48999999999999 999999954 467788888999999999999986533211 1136777
Q ss_pred HHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe---------
Q 046230 149 NELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT--------- 208 (489)
Q Consensus 149 ~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~--------- 208 (489)
.+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+...+.+++..
T Consensus 90 ~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 169 (429)
T PRK06173 90 VELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNH 169 (429)
T ss_pred HHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccc
Confidence 8999999998763 466666999999966655432 24456778888999776655543310
Q ss_pred ----EEEecCC-----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hHHHHHHHHH
Q 046230 209 ----IRVFQHN-----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FPEIIAICKK 268 (489)
Q Consensus 209 ----~~~~~~~-----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~~i~~l~~~ 268 (489)
+..++.. +++.|++.+... +.+.++||+||+ ++..|.+.| +++|+++|++
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~----------~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~ 239 (429)
T PRK06173 170 SLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK----------GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQ 239 (429)
T ss_pred cCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC----------CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHH
Confidence 1112211 245566666431 247899999997 888887643 9999999999
Q ss_pred cCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh-----CCCcc
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT-----CPAHL 338 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~-----~~~~~ 338 (489)
||++||+||+|+ +|||+|++ .++++|+.| ||+ +|+|++++ | +.+++++++++.+... .++.+
T Consensus 240 ~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--~~gK~l~g-G~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T 311 (429)
T PRK06173 240 YGVLLIFDEIAT--GFGRTGKLFALEHAGVVP---DIM--CIGKALTG-GYLTLSATITTEAIAQTICSGEAKCFMHGPT 311 (429)
T ss_pred cCCeEEecchhc--CCCcCCcchHHHhcCCCC---CEE--EeehhhhC-CccccceEEecHHHHHHHhcCCCCccccCCC
Confidence 999999999997 79999998 688999998 999 89999965 4 7778899999988632 12223
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEEEeCCCCcHHHHH
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~~~~~~~~~~~~~ 415 (489)
| .+||+.|++++++|+++ ..++.++++++++++|++.|+++ +++.+.+ ..++++++.+..+.....+.
T Consensus 312 ~--~g~p~~~aaa~a~l~~i-------~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~ 382 (429)
T PRK06173 312 F--MANPLACAIAAESIRLL-------LESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQ 382 (429)
T ss_pred C--CcCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHH
Confidence 3 48999999999999999 34567999999999999999876 5554332 45888889887766677899
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||++.+ .+ +.+||.||+.+|++|+++++++|+++++++
T Consensus 383 ~~l~e~Gi~v~~-------~g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 383 PRFVEHGIWVRP-------FG-KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred HHHHHCCeEEEe-------cC-CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999973 22 689999999999999999999999998764
No 52
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-40 Score=339.75 Aligned_cols=353 Identities=14% Similarity=0.139 Sum_probs=267.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||+| |++|||| ++.+...++|+||+|.+|+++|+++....... .-.
T Consensus 44 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~ 104 (464)
T PRK06938 44 RIPLALKRARGIYVEDVE---------------GRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL----DLT 104 (464)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc----ccC
Confidence 456788999999999999 9999999 55677889999999999999999752211111 123
Q ss_pred chhHHHHHHHHHHHhCCC-----CEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC--------
Q 046230 145 LMVHNELEECVARFVGKP-----AAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA-------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~-----~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (489)
++...+|.++|++.++.+ ..+++ +||++|+..+++. ..++..+|.+...+|+.+...+.+++.
T Consensus 105 ~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~ 184 (464)
T PRK06938 105 TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLG 184 (464)
T ss_pred CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCC
Confidence 677788999999887642 34455 6999999655554 456667788888999987766665431
Q ss_pred ------eEEEecCC---------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHH
Q 046230 208 ------TIRVFQHN---------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEI 262 (489)
Q Consensus 208 ------~~~~~~~~---------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i 262 (489)
...+++.+ +.+.+++++.+... .++..++||+||+++..|.+.| |++|
T Consensus 185 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-------~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l 257 (464)
T PRK06938 185 ALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPES-------GVVLPAAVILEVVQGEGGVIPAPIEWLRGL 257 (464)
T ss_pred CCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhcc-------CCCceEEEEEccccCCCCCcCCCHHHHHHH
Confidence 11222222 14556666643200 1236899999999998887754 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcc
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHL 338 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~ 338 (489)
+++|++||++||+|||++ +|||+|.+ .++++|+.| ||+ +++|++|+ | |++++++++ +.+....+..+
T Consensus 258 r~lc~~~giLlI~DEV~t--GfGRtG~~~a~e~~gv~P---Div--~~gKglgg-G~PlsAv~~~~~~-~~~~~~~~~~T 328 (464)
T PRK06938 258 RRITEEAGIPLIVDEIQS--GFGRTGKMFAFEHAGIIP---DVV--VLSKAIGG-SLPLAVVVYREWL-DTWQPGAHAGT 328 (464)
T ss_pred HHHHHHcCCEEEEecccc--CCCcCcHHHHHHhcCCCC---CEE--EeeccccC-CCceEEEeehhHh-hccCCCCCCCC
Confidence 999999999999999999 99999987 889999999 999 99999986 6 888888774 65543344445
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCC-----
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPA----- 409 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~----- 409 (489)
|+ +||+.|++++++|+++ ..+++.+++++++++|++.|+++ .++++. ...+.++.+.+..+.
T Consensus 329 ~~--gnpla~Aaa~a~L~~l-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~ 399 (464)
T PRK06938 329 FR--GNQMAMAAGSATLRYI-------KEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDA 399 (464)
T ss_pred CC--cCHHHHHHHHHHHHHH-------HHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccc
Confidence 55 9999999999999999 56789999999999999999886 333333 334666777664321
Q ss_pred ---------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 ---------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ---------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+.+.|+++|+++.+.+ ...+++||.||+.+|++|++++++++++++.++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 400 LGHPPANGELASLIQRECLRRGLILELGG-----RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred cccCCccHHHHHHHHHHHHHCCeEEeecC-----CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 13467889999999987321 124789999999999999999999999998764
No 53
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2e-40 Score=338.59 Aligned_cols=341 Identities=16% Similarity=0.171 Sum_probs=272.6
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc---ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS---YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s---~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
.+.++.+++|.++||.| |++||||++ ++++|. +||.+.+++.+++++++.... . +
T Consensus 25 ~~~~~~~~~G~~~~d~d---------------g~~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~--~--~- 82 (398)
T PRK03244 25 PPLALVRGEGAVVWDVD---------------GKEYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSN--L--F- 82 (398)
T ss_pred CCceEEEeeecEEEECC---------------CCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccC--c--c-
Confidence 45778999999999999 999999976 345554 479999999999998764321 1 1
Q ss_pred cchhHHHHHHHHHHHhCCC---CEEEeCccHHHHHHhHhhhc--CCCCEEEEcCCCchHHHHHHHhcC------------
Q 046230 144 TLMVHNELEECVARFVGKP---AAIVFGMGYVTNSAILPVLM--RKGSLIISDSLNHNSIVNGARGSG------------ 206 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~~~al~--~~g~~Vl~~~~~h~~~~~~~~~~g------------ 206 (489)
.+....+++++++++++.+ +.+++++|++++..+++.+. ++.++|..+..+|+.........+
T Consensus 83 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 162 (398)
T PRK03244 83 ATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLP 162 (398)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCC
Confidence 2455679999999998753 55666899999977777554 334677777788887766654443
Q ss_pred CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccc
Q 046230 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 207 ~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
..+..++++|++++++.+.+ +.++|++|++++++|.+.| +++|+++|++||++||+||+|+
T Consensus 163 ~~~~~~~~~d~~~l~~~~~~-------------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-- 227 (398)
T PRK03244 163 GGVEHVPYGDVDALAAAVDD-------------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-- 227 (398)
T ss_pred CCceEeCCCCHHHHHHhhcC-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--
Confidence 23456778899999987742 5678889999999999877 8999999999999999999999
Q ss_pred cccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHH
Q 046230 283 AVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVI 358 (489)
Q Consensus 283 ~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i 358 (489)
+||++|++ .++++++.| |++ ||||++|+ | |++++++++++.+....+..+|+ .||+.++++.++|+++
T Consensus 228 g~gr~g~~~~~~~~~~~p---Di~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~ 299 (398)
T PRK03244 228 GIGRTGAWFAHQHDGVTP---DVV--TLAKGLGG-GLPIGACLAFGPAADLLTPGLHGSTFG--GNPVACAAALAVLDTI 299 (398)
T ss_pred CCcccchHHhhhhhCCCC---CEE--EEchhhhC-CcccEEEEEcHHHHhhccCCCCcCCCC--CCHHHHHHHHHHHHHH
Confidence 89999987 567788888 888 99999985 6 99999999999887655555555 9999999999999988
Q ss_pred HccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCC
Q 046230 359 LGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLL 436 (489)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~ 436 (489)
..++..+++++++++|++.|++++++... ...+.++++.+.. .....+.++|+++||++.+. +
T Consensus 300 -------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~~~~~~l~~~Gv~~~~~-------~ 364 (398)
T PRK03244 300 -------ASEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAKAVEAAAREAGFLVNAV-------A 364 (398)
T ss_pred -------HhccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHHHHHHHHHHCCeEEeec-------C
Confidence 34567899999999999999997654322 2357777777743 34668999999999999842 2
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 437 LARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.+||+|++.+|++|+++++++|+++++++
T Consensus 365 ~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 365 PDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 3789999999999999999999999998764
No 54
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=4.5e-40 Score=336.40 Aligned_cols=345 Identities=16% Similarity=0.191 Sum_probs=274.6
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..++.++.+++|.|+||+| |++||||+| +..++++|+||++.+++.+++++++......
T Consensus 21 ~~~~~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~----- 80 (401)
T PRK00854 21 KPLDVVLTRGEGVWVWDTD---------------GNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAF----- 80 (401)
T ss_pred CCCCceEEeeeeCEEEECC---------------CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccccc-----
Confidence 3567788999999999999 999999844 4557788889999999999999976543211
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc-----------CCCCEEEEcCCCchHHHHHHHhc-------
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM-----------RKGSLIISDSLNHNSIVNGARGS------- 205 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~-----------~~g~~Vl~~~~~h~~~~~~~~~~------- 205 (489)
.++...+++++|+++.+.+.+++++||++|+..+++++. ++.++|.++..+|+++.......
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 256778999999999998889999999999977777763 23467888888999876544322
Q ss_pred -----CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 206 -----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 206 -----g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
...+..++++|+++|++.+.+ ++++|++|++++++|.+.| +++|+++|++||++||+|
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~-------------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D 227 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITP-------------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD 227 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCC-------------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 134567888999999987743 4678999999999999886 999999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQII 352 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~ 352 (489)
|+|+ ++|++|.+ ..+++++.| |++ +++|++++. +|++++++++++.+....+..+++ .+|+.+++++
T Consensus 228 Ev~~--g~g~~g~~~~~~~~g~~~---D~~--~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aa~~ 298 (401)
T PRK00854 228 EIQT--GLGRTGKLLAEEHEGIEA---DVT--LIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFG--GNPLACAVAR 298 (401)
T ss_pred chhh--CCCCCchHhHHhhcCCCC---CEE--EecccccCCccCeEEEEEcHHHHhcccCCCCCCCCC--cCHHHHHHHH
Confidence 9998 79999876 345678877 888 689999752 288999999999887555555555 7999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee--CCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeec
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL--GDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
++|+.+ ..++..++++++++++.+.|++++.... ....+.++.+.+.. .....++++.|+++||.+.+
T Consensus 299 a~L~~l-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~-- 369 (401)
T PRK00854 299 AALKVL-------TEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKD-- 369 (401)
T ss_pred HHHHHH-------HHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEec--
Confidence 999988 3345788999999999999998854322 12335566655533 23567899999999999873
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.+.+++||+|++.+|+++|++++++|++++.
T Consensus 370 -----~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 370 -----THDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -----CCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 2347899999999999999999999998763
No 55
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=339.25 Aligned_cols=346 Identities=17% Similarity=0.168 Sum_probs=265.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|.++.+++|+|+||.| |++|||+. +.+...++|+||++.+|+.+++++.. .. ...
T Consensus 34 ~~p~~i~~a~G~~l~D~d---------------G~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~------~~~ 91 (433)
T PRK00615 34 ITPPIVSSASGDIFIDSL---------------GKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT-SY------GLT 91 (433)
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC-CC------CCC
Confidence 577789999999999999 99999994 45778889889999999999998743 11 123
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHH---HHHHHhcC----------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSI---VNGARGSG---------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~---~~~~~~~g---------- 206 (489)
++...+|.++|++.++. +.+.+.+||++|+..+++. .+++..+|.....+|+.+ ..+....+
T Consensus 92 ~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~ 171 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLV 171 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCC
Confidence 56778899999998865 3666679999999555554 446666777788888854 32322221
Q ss_pred ------CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 207 ------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 207 ------~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
.....+++||+++|++.+.+. +.+.++||+|+++++.|.+.| +++|+++|++||++||+|
T Consensus 172 ~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~D 241 (433)
T PRK00615 172 DTDLAHPLTLSLPYNDFQIFQTVMNSL----------GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD 241 (433)
T ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhc----------CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 112446788999999998752 136789999999999999877 569999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhhCCCcc-cccCCCHHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYTCPAHL-YATSISPPAAEQII 352 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~~~~~~-~~~~~~p~~~aa~~ 352 (489)
|||+ ++ |+|.+ .+++++++| ||+ +|+|++|+ ++|++++++++++.+......+. .+.++||+.|++++
T Consensus 242 Ev~t--G~-R~G~~ga~~~~gv~P---Di~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~l 313 (433)
T PRK00615 242 EVVT--GF-RVAQGGAAAIYHVKP---DIT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGK 313 (433)
T ss_pred cccc--cc-cccHhHHHHhcCCCC---CeE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHH
Confidence 9998 78 77765 778999998 998 89999975 34999999999999864332221 23358999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFS 415 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~ 415 (489)
++|+++ ..++.++++++++++|+++|+++ |+++.....+.++.+.+.... ....+.
T Consensus 314 a~L~~i-------~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (433)
T PRK00615 314 ASINLC-------REQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFY 386 (433)
T ss_pred HHHHHH-------hcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHH
Confidence 999999 34567899999999997777664 565432224556666664321 234789
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||++.+..+|. ..+++.||++|||+++++++++++++
T Consensus 387 ~~l~~~Gv~~~~~~~~~---------~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 387 QSAFSKGVYLSPSPFEA---------SFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHCCeeecCccccc---------cceecCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999998655543 14677999999999999999999875
No 56
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-40 Score=336.95 Aligned_cols=357 Identities=17% Similarity=0.180 Sum_probs=269.0
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|+++....... ...
T Consensus 34 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~----~~~ 94 (457)
T PRK05639 34 LFPLVPKRGFGALIEDVD---------------GNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG----YTH 94 (457)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC----ccC
Confidence 357779999999999999 99999995 4567888988999999999999985432211 113
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC------------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA------------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~------------ 207 (489)
++...+|.++|++.++. +.+.+.+||++|+..+++. .+++..+|.....+|+.+.....+++.
T Consensus 95 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 95 SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 56678899999998864 4566679999999655554 346666777888999988766655431
Q ss_pred -eEEEecCCC-------------HHHHHH----HHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHH
Q 046230 208 -TIRVFQHNT-------------PSHLEE----VLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAI 265 (489)
Q Consensus 208 -~~~~~~~~d-------------~~~Le~----~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l 265 (489)
.+..++.++ .+++.+ .+++.+... ...+.+.++||+||+++..|.+.| +++|+++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSH---VVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHh---hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 122333332 222211 122211110 001357999999999998887654 9999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccccc
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYAT 341 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~ 341 (489)
|++||++||+||+|+ +|||+|++ .++++|+.| ||+ +|+|++|+ | |++++++++++ +.... +.++.
T Consensus 252 c~~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--~~gK~l~g-G~pi~av~~~~~i~~-~~~~~--~~~T~ 320 (457)
T PRK05639 252 LDEHGILLVMDEVQT--GIGRTGKWFASEWFEVKP---DLI--IFGKGVAS-GMGLSGVIGRKELMD-LTSGS--ALLTP 320 (457)
T ss_pred HHHcCCEEEEechhh--ccCcCchHHHHHhcCCCC---CEE--EechhhcC-CCcceeEEehHHHHh-hcCCC--cccCC
Confidence 999999999999999 89999998 788999998 999 89999986 5 89999999998 32222 23445
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCC------CcH
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNP------AKI 411 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~------~~~ 411 (489)
++||+.|++++++|+++ +.+++++++++++++|++.|+++ +++++. ...+.++.+.+..+ ...
T Consensus 321 ~g~p~~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~ 393 (457)
T PRK05639 321 AANPVISAAAEATLEII-------EEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELT 393 (457)
T ss_pred CcCHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHH
Confidence 69999999999999999 55778999999999999999885 444433 33455666655332 124
Q ss_pred HHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 412 PAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..+.+.|+++|+++.+. +...+++||.||+.+|++|+|+++++|+++++.+
T Consensus 394 ~~~~~~~~~~Gv~~~~~-----g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 394 GKICWRAFELGLILPSY-----GMFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred HHHHHHHHhCCeEEeec-----CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 57889999999999743 2234799999999999999999999999999876
No 57
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=2.2e-40 Score=340.25 Aligned_cols=342 Identities=18% Similarity=0.212 Sum_probs=263.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
+|..+.+++|+|+||+| |++||||. +.+...++|+||+|.+++.+|+++.. ... ..+
T Consensus 81 ~p~~~~~a~G~~l~D~d---------------G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-~~~------~~~ 138 (474)
T PLN02482 81 QPIVFDRVKGSYAWDVD---------------GNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-SFG------APC 138 (474)
T ss_pred CCeeEEEeeeCEEEECC---------------CCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-CCC------CCC
Confidence 45668999999999999 99999994 45677888889999999999999843 211 235
Q ss_pred hhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHH--HHHh-----------cC--
Q 046230 146 MVHNELEECVARFVG-KPAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVN--GARG-----------SG-- 206 (489)
Q Consensus 146 ~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~--~~~~-----------~g-- 206 (489)
+...+|.++|++.++ .+...+.+||++|+..+++ +.+++..+|.....+|+.... .... .+
T Consensus 139 ~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (474)
T PLN02482 139 LLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVP 218 (474)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCC
Confidence 677889999999876 4566667999999955554 445677777778888885421 1100 01
Q ss_pred ----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 046230 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa 278 (489)
..+..+++||+++|++.++.+ +...++||+|+++++.|.+.| |++|+++|++||++||+||+
T Consensus 219 ~~~~~~~~~~~~nd~~~l~~~l~~~----------~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 219 KAATSATLTAPYNDLEAVKKLFEAN----------KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCeEEecCCChHHHHHHHHhC----------CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 134668899999999988752 246889999999999998876 67999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCC-cccccCCCHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPA-HLYATSISPPAAEQIIS 353 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~-~~~~~~~~p~~~aa~~a 353 (489)
|+ +| |+|.+ ..+++|+.| ||+ ||+|++|+ | |++++++++++.+...... +..+.++||+.|+++++
T Consensus 289 ~t--Gf-R~g~~ga~~~~gv~P---Di~--t~gK~lgg-G~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala 359 (474)
T PLN02482 289 MT--GF-RIAYGGAQEYFGITP---DLT--TLGKVIGG-GLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 359 (474)
T ss_pred cc--Ce-ecCcchHhHHhCCCC---CEE--EecchhhC-CCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHH
Confidence 98 88 77766 778899999 998 99999986 5 8889999999988643211 11223489999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeee-CCCCCCeEEEEeCCC-------------CcHHHHH
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVL-GDNDSPVMPIMLYNP-------------AKIPAFS 415 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~-~~~~~~~~~~~~~~~-------------~~~~~~~ 415 (489)
+|+++ +.++.++++.+++++|+++|+++ |+++. ...++ ++.+.+..+ .....+.
T Consensus 360 ~L~~l-------~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g-~~gi~f~~~~~~~~~~~~~~d~~~~~~~~ 431 (474)
T PLN02482 360 TLKRL-------QQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG-MFGFFFTEGPVYNFADAKKSDTAKFARFH 431 (474)
T ss_pred HHHHH-------hccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-EEEEEEecCCccChhhhccCCHHHHHHHH
Confidence 99999 34568999999999999999876 34544 33333 555555321 1234788
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.|+++||++.+.+++. + .|++.||++|||++++++++++++
T Consensus 432 ~~l~~~Gv~~~~~~~~~--------~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 432 RGMLEEGVYLAPSQFEA--------G-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHCCeEEeccCCCC--------C-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999998655432 1 378899999999999999999865
No 58
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-41 Score=315.49 Aligned_cols=346 Identities=18% Similarity=0.191 Sum_probs=273.6
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
|..|.+++|.|++|.+ |++|||+ ++-....++|+||+|.+++.+|+.++-+.+... .++
T Consensus 33 Pl~Iv~~~~~ylyDe~---------------G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~-----~~~ 92 (442)
T KOG1404|consen 33 PLVIVRGEGQYLYDEE---------------GRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGY-----LNP 92 (442)
T ss_pred CceEEecceEEEEcCC---------------CceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccc-----cCC
Confidence 5668999999999999 9999998 555778888889999999999998755444322 256
Q ss_pred hHHHHHHHHHHHhCCC--CEEEeCccHHHHHH---hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------
Q 046230 147 VHNELEECVARFVGKP--AAIVFGMGYVTNSA---ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------ 215 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~---~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------ 215 (489)
...+++++|++.++.+ .+++++||++||.. +++...+.-+.|...+.+|+.+...+.+++......+..
T Consensus 93 pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~ 172 (442)
T KOG1404|consen 93 PIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGV 172 (442)
T ss_pred cHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcc
Confidence 6678999998888765 45555999999933 334456788899999999999888887776554432111
Q ss_pred ---------------C-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCc
Q 046230 216 ---------------T-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKA 271 (489)
Q Consensus 216 ---------------d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~ 271 (489)
+ -+.+.+.+.+.+..+ .+...+++|.|++++..|.+.+ |+++.++|+|+|.
T Consensus 173 ~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~-----~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Gg 247 (442)
T KOG1404|consen 173 HHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYD-----GPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGG 247 (442)
T ss_pred cccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhc-----CCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCC
Confidence 1 122222222222222 2357899999999999998855 9999999999999
Q ss_pred EEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC-CCcccccCCCHH
Q 046230 272 YIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC-PAHLYATSISPP 346 (489)
Q Consensus 272 ~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~-~~~~~~~~~~p~ 346 (489)
++|.|||++ +|||+|.. .++..|+.| ||+ |++|++|. | |+++.++++++.+.+.. +.++|+ +||+
T Consensus 248 l~IaDEVqt--GfGRtG~~wgfe~h~v~P---DIv--TmAKgiGn-G~Pl~AVvtt~EIa~v~~~~~~~fnTyg--gnP~ 317 (442)
T KOG1404|consen 248 LFIADEVQT--GFGRTGHMWGFESHGVVP---DIV--TMAKGIGN-GFPLGAVVTTPEIADVLNQKSSHFNTYG--GNPV 317 (442)
T ss_pred EEEehhhhh--ccccccccccccccCCCc---cHH--HHHhhccC-CCcceeeecCHHHHHHHHhccccccccC--CCch
Confidence 999999999 99999976 889999999 999 99999998 7 99999999999998877 555555 9999
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCC--CeEEEEeCCCC---------cHHH
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDNDS--PVMPIMLYNPA---------KIPA 413 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~--~~~~~~~~~~~---------~~~~ 413 (489)
+|++++++|+++ +.+++.++.++.+.||++.|.++ +++++++.++ .++++.+-... ....
T Consensus 318 a~avg~aVL~Vi-------kee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~ 390 (442)
T KOG1404|consen 318 ACAVGLAVLKVI-------KEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAV 390 (442)
T ss_pred hHHHHHHHHHHH-------HHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHH
Confidence 999999999999 77899999999999999999998 6777777654 45555553222 2346
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
+.+.|.++|+.+.-.+ ...+++||+||.++|++|+|.+++..
T Consensus 391 i~~~cke~Gvlvg~g~-----i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 391 IGEQCKELGVLVGKGG-----IHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHhCeeeeccc-----ccceEEEecCCeeccHHHHHHHHHHH
Confidence 7899999999996332 23469999999999999998888766
No 59
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.4e-40 Score=335.47 Aligned_cols=343 Identities=15% Similarity=0.184 Sum_probs=266.3
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+++++|+|+||.| |++|||| ++++...++|+||.|.+|+.+|+++..... ..
T Consensus 34 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-------~~ 91 (428)
T PRK12389 34 GAPVVMERGKGAYFYDVD---------------GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYG-------TP 91 (428)
T ss_pred CCCeEEEeccCCEEEeCC---------------CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccC-------CC
Confidence 356678999999999999 9999999 455778899999999999999999743211 23
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcC--------------
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSG-------------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g-------------- 206 (489)
++...++.++|++.++ .+.+++.+||++|+..+++. ..++..+|.....+|+.+...+..++
T Consensus 92 ~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK12389 92 TELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGV 171 (428)
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCC
Confidence 6777899999998875 35666679999999655554 44666677788889997765554432
Q ss_pred -----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 207 -----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
..+..++++|++++++.+.+. +.+.++||+||++++.|.+.| +++|+++|++||++||+||
T Consensus 172 ~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 172 PKSIAQEVITVPFNDIEALKEALDKW----------GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred CCcccCceEEcCCCCHHHHHHHHHhc----------CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 134556788999999988752 246889999999999999887 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcc-cccCCCHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHL-YATSISPPAAEQII 352 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~-~~~~~~p~~~aa~~ 352 (489)
|++ +| |+|.+ .++++|+.| ||+ |++|++|+ | |++++++++++.+......+. .+.++||+.|++++
T Consensus 242 V~t--G~-Rt~~~~a~~~~gv~P---Div--t~gK~lgg-G~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaal 312 (428)
T PRK12389 242 VIT--AF-RFMYGGAQDLLGVEP---DLT--ALGKIIGG-GLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGI 312 (428)
T ss_pred ccc--cc-ccCcchhhHHhCCCC---Cee--eechhhcC-CCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHH
Confidence 999 88 88765 678899999 999 99999986 6 888999999998863221111 22359999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeC-CCCCCeEEEEeCCCC-------------cHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLG-DNDSPVMPIMLYNPA-------------KIPAF 414 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~-~~~~~~~~~~~~~~~-------------~~~~~ 414 (489)
++|+++ +.+++.+++++++++|++.|+++ ++.+.. ...+ ++.+.+.... ....+
T Consensus 313 a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 384 (428)
T PRK12389 313 ACLEVL-------QQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKF 384 (428)
T ss_pred HHHHHH-------hcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHH
Confidence 999999 44568999999999999999874 433221 2233 5666653221 14578
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.|+++||++.+.++ +. +.|++.+|++||+++++++++++++
T Consensus 385 ~~~l~~~Gv~~~~~~~-------~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 385 FKLMLNQGINLAPSKY-------EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHCCcEeecCCC-------CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 8999999999985332 12 3477899999999999999999865
No 60
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=6.7e-40 Score=332.88 Aligned_cols=346 Identities=16% Similarity=0.165 Sum_probs=271.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||+| |++|||| ++.....++|+||++.+|+.+|+++...... . -.
T Consensus 21 ~~~~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---~--~~ 80 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQ---------------GREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN---V--FY 80 (408)
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc---c--cC
Confidence 566778999999999999 9999999 4557788999999999999999998533221 1 13
Q ss_pred chhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHhHhhhc------C----CCCEEEEcCCCchHHHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGK-PAAIVFGMGYVTNSAILPVLM------R----KGSLIISDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~~~al~------~----~g~~Vl~~~~~h~~~~~~~~~~g~------ 207 (489)
++...++.++|++..+. +..++.+||++|+..+++... + +..+|.....+|+.+...+..++.
T Consensus 81 ~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 160 (408)
T PRK04612 81 SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEG 160 (408)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 56678899999988754 456666999999966655432 2 223566777888887766655432
Q ss_pred ------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 208 ------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
.+..++.+|++.+++.++. ..+++|++||+++..|.+.+ +++|+++|++||+++|+||
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DE 228 (408)
T PRK04612 161 YEPLPGGFRYVDFNDVEALEAAMAG------------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDE 228 (408)
T ss_pred CCCCCCCceEcCCCCHHHHHHhhCC------------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1244567789999887742 47889999999987777653 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ ++|++|.. ....+++.| |++ ||||++|+ | |++++++++++.+....+..+|+ +||+.++++.+
T Consensus 229 v~t--g~gr~G~~~a~~~~~~~p---di~--t~~K~l~~-G~piga~~~~~~~~~~~~~~~~~~t~~--~~p~~~aaa~a 298 (408)
T PRK04612 229 IQC--GMGRTGTLFAHWQEQVTP---DIV--TLAKALGG-GFPIGAMLAGPKVAETMQFGAHGTTFG--GNPLAAAVARV 298 (408)
T ss_pred ccc--CCCcCCchhhhhhcCCCC---CEE--EEcchhcC-CCceEEEEECHHHHhhhcCCCcCCCCC--CCHHHHHHHHH
Confidence 999 89999976 445567777 888 99999986 6 88888999988887655555565 89999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCC--CCcHHHHHHHHhhCCceEEe
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYN--PAKIPAFSRECLRQNVAVVT 427 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~ 427 (489)
+|+++ +.++++++++++++++++.|+++ .++++ ....+.++++.+.. ......+.+.|+++||++.+
T Consensus 299 ~L~~~-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~ 371 (408)
T PRK04612 299 ALRKL-------ASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ 371 (408)
T ss_pred HHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEee
Confidence 99999 45688999999999999999886 23332 23346677777643 23456788999999999973
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.+.+||+|++.+|++||++++++|+++++++
T Consensus 372 -------~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 372 -------AGPDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred -------CCCCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 345889999999999999999999999998764
No 61
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=8.4e-40 Score=335.54 Aligned_cols=349 Identities=17% Similarity=0.178 Sum_probs=265.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.|..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|++++...... .-.+
T Consensus 31 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~----~~~~ 91 (445)
T PRK09221 31 APRLLVSAEGMYYTDAD---------------GRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAF----QMGH 91 (445)
T ss_pred CCceEEeccccEEEeCC---------------CCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcccc----ccCC
Confidence 46778999999999999 99999994 4566778888999999999999986443311 1135
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe------
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (489)
+...+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+...+..++..
T Consensus 92 ~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~ 171 (445)
T PRK09221 92 PLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMF 171 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhcc
Confidence 6778899999998753 566777999999966665432 23356677888888876655444311
Q ss_pred ------EEEecCCC------------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 209 ------IRVFQHNT------------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~~~d------------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
+..++... .+++++.++.. .+.+.++||+||++++.|.+.| |+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---------~~~~iAavi~Epv~g~~G~~~~~~~yl~ 242 (445)
T PRK09221 172 GGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH---------DASTIAAVIVEPMAGSAGVLVPPKGYLQ 242 (445)
T ss_pred CCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc---------CCCcEEEEEEecccCCCCcccCCHHHHH
Confidence 11122111 24566666531 1247889999999999999988 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhh---
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYT--- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~--- 333 (489)
+|+++|++||++||+||+|+ +|||+|.+ .++++++.| ||+ +++|++++. .|++++++++++.+...
T Consensus 243 ~l~~lc~~~g~llI~DEV~t--G~GRtG~~~~~~~~gv~P---Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~ 315 (445)
T PRK09221 243 RLREICDKHGILLIFDEVIT--GFGRLGAAFAAERFGVTP---DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEY 315 (445)
T ss_pred HHHHHHHHcCCEEEEeehhh--CCCcCchhhHHHhcCCCC---CEE--EeccccccCcccceeeEEcHHHHHhhccCccc
Confidence 99999999999999999999 89999998 788999999 999 999999761 28889999999987532
Q ss_pred ----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC--CCCeEEEEeC
Q 046230 334 ----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN--DSPVMPIMLY 406 (489)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~--~~~~~~~~~~ 406 (489)
.++++|+ +||+.+++++++|+++ ..+++++++++++++|++.|+++ +++.+.+. .+.+..+.+.
T Consensus 316 ~~~~~~~~T~~--~~pl~~aaa~a~L~~i-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~ 386 (445)
T PRK09221 316 AIEFFHGYTYS--AHPVACAAGLATLDIY-------REEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELA 386 (445)
T ss_pred ccccccccCCC--cCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEe
Confidence 2334444 9999999999999999 44578999999999999999987 43322222 2344444443
Q ss_pred CC-----CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 407 NP-----AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 407 ~~-----~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. .....+.+.|+++||++.+ ..+.+||+|++.+|++|||+++++|+++++++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~Gv~~~~--------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 387 PRPGAPGARGYEAFMKCFEKGLLVRY--------TGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cccccccchHHHHHHHHHHCCeEEee--------cCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 21 1245788999999999872 23689999999999999999999999998764
No 62
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=336.02 Aligned_cols=358 Identities=16% Similarity=0.172 Sum_probs=269.5
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+.+|..+.+++|+|+||.| |++||||. +.+...++|+||++.+++.+|+++........ .
T Consensus 10 ~~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~----~ 70 (443)
T PRK07483 10 RATLPVAVAGEGIYLIDAT---------------GKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSF----F 70 (443)
T ss_pred cCCCceEEeceEEEEEeCC---------------CCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccc----c
Confidence 3567889999999999999 99999994 45778899989999999999999854222110 1
Q ss_pred cchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe----
Q 046230 144 TLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT---- 208 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~---- 208 (489)
.++...+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+...+.+++..
T Consensus 71 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~ 150 (443)
T PRK07483 71 TTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRRE 150 (443)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCccccc
Confidence 367778999999998753 566667999999966555422 23446667888999887666654321
Q ss_pred --------EEEec----CCCH--------------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC-CCCCCC---
Q 046230 209 --------IRVFQ----HNTP--------------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM-EGELCK--- 258 (489)
Q Consensus 209 --------~~~~~----~~d~--------------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~-~G~~~~--- 258 (489)
+..++ .++. +++++++.. . .+.+.++||+||+++. .|.+.+
T Consensus 151 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~------~~~~iAAvivEPiqg~~gG~~~~~~~ 221 (443)
T PRK07483 151 PFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILE---L------GPDTVAAFVAETVVGATAGAVPPVPG 221 (443)
T ss_pred ccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh---c------CCCceEEEEEeCcccCcCCeEeCCHH
Confidence 11111 1221 344544432 1 1247899999999974 576644
Q ss_pred -hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh
Q 046230 259 -FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY 332 (489)
Q Consensus 259 -l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~ 332 (489)
|++|+++|+|||+++|+||+++ +|||+|.+ .++++++.| ||+ |++|++++ | |++++++++++.+..
T Consensus 222 fl~~lr~lc~~~gillI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~g-G~~Pi~av~~~~~i~~~~~~ 293 (443)
T PRK07483 222 YFKRIREVCDRYGVLLILDEVMC--GMGRTGTLFACEEDGVAP---DLV--TIAKGLGA-GYQPIGAVLASDRIYDAIAD 293 (443)
T ss_pred HHHHHHHHHHHhCCEEEEeccee--CcccCcHHHHHhhcCCCC---Cee--eehhhhcc-CccccEEEEEcHHHHHHHhc
Confidence 9999999999999999999999 99999988 788999999 999 99999976 4 888999999998864
Q ss_pred h----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEE
Q 046230 333 T----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIM 404 (489)
Q Consensus 333 ~----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~ 404 (489)
. .++++|+ +||+.|++++++|+++ +.+++.+++++++++|++.|+++ .++++. ...+.++.+.
T Consensus 294 ~~~~~~h~~T~~--gnpl~~aaa~a~l~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie 364 (443)
T PRK07483 294 GSGFFQHGHTYL--GHATACAAALAVQRVI-------AEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVE 364 (443)
T ss_pred CCCccccCCCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEE
Confidence 3 2334444 9999999999999999 56789999999999999999874 333322 2346667776
Q ss_pred eCCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+..+. ....+.+.|+++|+++.+.+........+.+||+||+.+|++|||+++++|+++++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 365 LVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred EeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 64221 2357889999999999854321111124789999999999999999999999999764
No 63
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.5e-40 Score=335.86 Aligned_cols=351 Identities=17% Similarity=0.177 Sum_probs=270.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
++|..+.+++|+|+||+| |++||||. +.....++|+||++.+|+++|++++....... -.
T Consensus 23 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~----~~ 83 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLAD---------------GRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAG----FT 83 (423)
T ss_pred CCCeeEEeccccEEEeCC---------------CCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccc----cC
Confidence 456788999999999999 99999994 45778889889999999999999865322110 13
Q ss_pred chhHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcC-------
Q 046230 145 LMVHNELEECVARFVG--KPAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSG------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g------- 206 (489)
++...+|+++|++.++ .+..++.+||++|+..+++.. .++.++|.....+|+.+...+..++
T Consensus 84 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 163 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL 163 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc
Confidence 5677889999999885 356677799999996666643 2345577788888887665554332
Q ss_pred -------CeEEEecCCC-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC----hHHHHHHHHHc
Q 046230 207 -------ATIRVFQHNT-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK----FPEIIAICKKY 269 (489)
Q Consensus 207 -------~~~~~~~~~d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~----l~~i~~l~~~~ 269 (489)
...++++++| ++++++.+.+. +++.++|++|| +++..|...+ |++|+++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~----------~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~ 233 (423)
T PRK05964 164 YTPLLFEQVTAPFPPDGYEQATLDALEALLEKH----------AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH 233 (423)
T ss_pred ccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC----------CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc
Confidence 2334456666 77788777642 24788999999 5777776654 99999999999
Q ss_pred CcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh--CCC--ccccc
Q 046230 270 KAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT--CPA--HLYAT 341 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~--~~~--~~~~~ 341 (489)
|++||+||+|+ ++|++|.+ ..+++++.| ||+ +++|++++.+ |++++++++++.+... ... +..+.
T Consensus 234 g~llI~DEv~t--g~gr~G~~~a~~~~~v~p---Di~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~ 306 (423)
T PRK05964 234 GVLLIFDEIAT--GFGRTGTLFACEQAGVSP---DIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSY 306 (423)
T ss_pred CCEEEEechhh--CCCcCcchhHHHhcCCCC---Cee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCC
Confidence 99999999999 89999987 668899988 998 9999997522 8899999999988532 111 11122
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCCCC---cHHHHH
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYNPA---KIPAFS 415 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~~~---~~~~~~ 415 (489)
++||+.+++++++|+++ +.++..++++++++++++.|+++ +++.+. ...+.++.+.+.... ....+.
T Consensus 307 ~~np~~~aaa~a~l~~l-------~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~ 379 (423)
T PRK05964 307 TANPLACAAANASLDLF-------EDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALR 379 (423)
T ss_pred CcCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHH
Confidence 48999999999999998 44568899999999999999887 443322 234666677775543 356899
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||++.+. .+.+||+|++.+|++|||+++++|+++++++
T Consensus 380 ~~l~~~Gv~v~~~--------~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 380 AFALERGVLLRPL--------GNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHCCeEEEec--------CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 9999999999842 2579999999999999999999999998763
No 64
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1e-39 Score=334.38 Aligned_cols=355 Identities=14% Similarity=0.147 Sum_probs=271.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||.| |++|||| ++.+...++|+||++.+|+.+|+++.+..... ...
T Consensus 20 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~ 80 (425)
T PRK09264 20 SFPVVFDKAKGSWLYDED---------------GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL----DMH 80 (425)
T ss_pred CCCccEEeeecCEEEeCC---------------CCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc----ccC
Confidence 467889999999999999 9999999 45577889989999999999999985543321 113
Q ss_pred chhHHHHHHHHHHHhC----CC-CEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC--------
Q 046230 145 LMVHNELEECVARFVG----KP-AAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA-------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g----~~-~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (489)
++...+|.++|++.+. .+ ..+++ +||++|+..+++. ..++..+|.+...+|+.+...+..++.
T Consensus 81 ~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 160 (425)
T PRK09264 81 TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAG 160 (425)
T ss_pred cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCC
Confidence 5667889999998752 23 33454 6999999655554 446666777888899987766655431
Q ss_pred ----eEEEecC--------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCc
Q 046230 208 ----TIRVFQH--------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKA 271 (489)
Q Consensus 208 ----~~~~~~~--------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~ 271 (489)
.+..++. +|+++|++.+.+... .++..++||+||++++.|.+. +|++|+++|++||+
T Consensus 161 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 233 (425)
T PRK09264 161 VPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS-------GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDI 233 (425)
T ss_pred CCCCCeEEeCCCCccccchhHHHHHHHHHHhccC-------CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCc
Confidence 1233443 367788887765210 123678999999999988764 49999999999999
Q ss_pred EEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHH
Q 046230 272 YIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPA 347 (489)
Q Consensus 272 ~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~ 347 (489)
+||+||+|+ +|||+|.+ .++++++.| ||+ ||+|++|+.| |++++++++ +.+....+..+|+ +||+.
T Consensus 234 llI~DEV~t--G~GrtG~~~~~~~~~v~P---Di~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~~--gnp~~ 303 (425)
T PRK09264 234 LLIVDDIQA--GCGRTGTFFSFERAGITP---DIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTFR--GNNLA 303 (425)
T ss_pred EEEEechhh--CCccccHHHHHhhcCCCC---CEE--EeccccCCCccceEEEEEchhh-hccCCCccCCCCC--CCHHH
Confidence 999999999 89999988 778899998 988 9999998756 889998886 4443333344444 89999
Q ss_pred HHHHHHHH-HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe---eeCCCCCCeEEEEeCCCCcHHHHHHHHhhC
Q 046230 348 AEQIISAI-KVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE---VLGDNDSPVMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 348 ~aa~~a~L-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
+++++++| +++ ..+++.+++++++++++++|+++ .++ ......+.++++.+........+.+.|+++
T Consensus 304 ~aaa~a~l~~~~-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~ 376 (425)
T PRK09264 304 FVTATAALEEYW-------SDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFEN 376 (425)
T ss_pred HHHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHC
Confidence 99999999 554 44578999999999999998875 232 112234677788886655667899999999
Q ss_pred CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 422 NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 422 Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
||.+.+.+ ...++|||+|++.+|+++|++++++|+++++++.
T Consensus 377 Gv~~~~~~-----~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 377 GLIIETSG-----PEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred CCEEeccC-----CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997532 2247999999999999999999999999998764
No 65
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=5.6e-40 Score=331.74 Aligned_cols=340 Identities=16% Similarity=0.177 Sum_probs=268.8
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHH
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHN 149 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (489)
+.+++|+|+||+| |++||||.+ .+...++|+||++.+|+.+|+.+...... ...++...
T Consensus 1 ~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~ 60 (382)
T PLN00144 1 FVSGKGCKLYDVE---------------GKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN-----VYHTIPQV 60 (382)
T ss_pred CeeeeccEEEeCC---------------CCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc-----cccCHHHH
Confidence 4679999999999 999999954 46788898899999999999998544321 11256678
Q ss_pred HHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---cC-------------CCCEEEEcCCCchHHHHHHHhcCC------
Q 046230 150 ELEECVARFVGKPAAIVFGMGYVTNSAILPVL---MR-------------KGSLIISDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---~~-------------~g~~Vl~~~~~h~~~~~~~~~~g~------ 207 (489)
++.++|++..+.+.+++.+||++|+..+++.. .+ +.++|.+...+|+.+......++-
T Consensus 61 ~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 140 (382)
T PLN00144 61 ELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTP 140 (382)
T ss_pred HHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCcccccc
Confidence 99999999877777777799999996666543 22 234677788888887766655432
Q ss_pred ------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 208 ------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
.+..++++|+++|++.++. .+.++|++||++++.|.+.+ +++|+++|++||+++|+||
T Consensus 141 ~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DE 208 (382)
T PLN00144 141 FEPLMPGVTFVEYGNLEAARKLIQK------------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDE 208 (382)
T ss_pred CCCCCCCeEEeCCCCHHHHHHhcCC------------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1345678899999987743 46789999999988665532 8999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+|+ +||++|.+ ..++++++| ||+ ||||++++ | |++++++++++.+....+..+++ +||+.++++.+
T Consensus 209 v~t--g~gr~g~~~~~~~~~~~P---Di~--t~sK~l~~-G~pig~v~~~~~~~~~~~~~~~~~T~~--~~pl~~aaa~a 278 (382)
T PLN00144 209 VQC--GLGRTGYLWAHEAYGVEP---DIM--TLAKPLAG-GLPIGAVLVTEKVASAINPGDHGSTFA--GGPLVCNAALA 278 (382)
T ss_pred hhh--CCCccchHhhhhhcCCCC---CEE--EecccccC-CcceEEEEEcHHHHhccCCCCCCCCCC--CCHHHHHHHHH
Confidence 999 99999987 557899998 888 99999986 6 99999999999887655555555 99999999999
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
+|+++ +.++..++++++++++++.|+++ +.+.. ....+.++++.+. .....+.+.|+++||.+.+.+
T Consensus 279 ~l~~i-------~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~ 349 (382)
T PLN00144 279 VLDKI-------SKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLD--VPAGPLVDACRDSGLLVLTAG 349 (382)
T ss_pred HHHHH-------hhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEec--CccHHHHHHHHHCCeEEeecC
Confidence 99999 45678888999999988888764 33221 1236778888773 335679999999999998431
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..+.+||+|+..+|++++++++++|++++.++
T Consensus 350 ------~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 350 ------KGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 13789999999999999999999999998754
No 66
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=335.11 Aligned_cols=353 Identities=16% Similarity=0.127 Sum_probs=268.1
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..|++++|+|+||.| |++||||.+ .+...++|+||++++|+.+|++++...... ...++
T Consensus 35 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~----~~~~~ 95 (460)
T PRK06541 35 VPVIVRGEGCYIWDDR---------------GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW----SYAHP 95 (460)
T ss_pred CceEEeCcccEEEeCC---------------CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc----ccCCH
Confidence 3458999999999999 999999954 466778888999999999999986543211 12367
Q ss_pred hHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-------
Q 046230 147 VHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------- 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (489)
...++.++|++.++. +.+++.+||++|+..+++... ++.++|.....+|+.+...+..++..
T Consensus 96 ~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 175 (460)
T PRK06541 96 PAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFE 175 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccC
Confidence 778999999998754 466667999999966555432 24556778888999887666554321
Q ss_pred -----EEEecC----------CCH--------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHH
Q 046230 209 -----IRVFQH----------NTP--------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPE 261 (489)
Q Consensus 209 -----~~~~~~----------~d~--------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~ 261 (489)
+..++. ++. +.+++.++.. .+...++||+||+++++|.+.+ |++
T Consensus 176 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~Aavi~EPv~g~~G~~~~~~~yl~~ 246 (460)
T PRK06541 176 PLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE---------GPDTVAAVFLEPVQNAGGCFPPPPGYFER 246 (460)
T ss_pred CCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc---------CCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 111221 122 4455555421 1257899999999999999877 999
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCC
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~ 336 (489)
|+++|++||++||+||+|+ +|||+|.+ .++++|+.| ||+ ||+|++|+ | |++++++++++.+......
T Consensus 247 l~~lc~~~g~llI~DEV~t--GfGR~G~~~a~~~~gv~P---Div--t~gK~l~~-G~~pigav~~~~~i~~~~~~~~~~ 318 (460)
T PRK06541 247 VREICDRYDVLLVSDEVIC--AFGRLGEMFGCERFGYVP---DII--TCAKGITS-GYSPLGAMIASDRLFEPFLDGPTM 318 (460)
T ss_pred HHHHHHHcCCEEEEechhh--CCCcCchhhhhhhcCCCC---CEE--EecccccC-CccceeEEEEcHHHHHHhhcCCCc
Confidence 9999999999999999999 99999997 778899998 999 89999985 4 8889999999887643211
Q ss_pred --cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee--CCCCCCeEEEEeCCCC--
Q 046230 337 --HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL--GDNDSPVMPIMLYNPA-- 409 (489)
Q Consensus 337 --~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~--~~~~~~~~~~~~~~~~-- 409 (489)
+.++.++||+.+++++++|+++ +.++.++++++++++|++.|+++ .++++ ....+.++.+.+....
T Consensus 319 ~~~~~T~~gnp~~~aaala~l~~l-------~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~ 391 (460)
T PRK06541 319 FLHGYTFGGHPVSAAVALANLDIF-------EREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKAT 391 (460)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCccc
Confidence 2234459999999999999998 45678899999999999999987 33332 2244677777764211
Q ss_pred ------------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 410 ------------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 410 ------------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....+...|+++||++.+. +.+.+++||+|++.+|++|||+++++|+++++++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 392 KETFTDDESERLLRGFLSPALFEAGLYCRAD-----DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred ccCCcchhhhhhHHHHHHHHHHhCCeEEEec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0125778999999999842 23457899999999999999999999999997653
No 67
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=9.4e-40 Score=335.83 Aligned_cols=348 Identities=19% Similarity=0.224 Sum_probs=263.5
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..+.+++|+|+||.| |++||||.+ .+...++|+||++++|+.+|++++...... ....++
T Consensus 33 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~---~~~~~~ 94 (456)
T PRK07480 33 SRVITRAEGVYLWDSE---------------GNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTF---FKTTHP 94 (456)
T ss_pred CceEEeceeeEEEeCC---------------CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc---cccCCH
Confidence 4678999999999999 999999954 466788988999999999999986543211 112477
Q ss_pred hHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-------
Q 046230 147 VHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------- 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (489)
...+|+++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+..+..+++..
T Consensus 95 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~ 174 (456)
T PRK07480 95 PAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGD 174 (456)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccC
Confidence 889999999999864 466677999999966665432 23345667788898877666554421
Q ss_pred -----EEEecCC---------C--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHH
Q 046230 209 -----IRVFQHN---------T--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEI 262 (489)
Q Consensus 209 -----~~~~~~~---------d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i 262 (489)
+..++.+ + .++|++.+.. . .+.+.++||+||+++..|.+.+ +++|
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~------~~~~vAAvi~EPiqg~gG~~~~~~~yl~~l 245 (456)
T PRK07480 175 LPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE---L------GADNVAAFIGEPIQGAGGVIIPPATYWPEI 245 (456)
T ss_pred CCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHh---c------CCCcEEEEEEccccCCCCCccCCHHHHHHH
Confidence 1111211 1 1344433322 1 1257899999999999888765 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh----h
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY----T 333 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~----~ 333 (489)
+++|++||++||+|||++ +|||+|++ .++++|+.| ||+ +|+|++++ | |++++++++++.+.. .
T Consensus 246 r~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~g-G~~Pi~av~~~~~i~~~~~~~~~~~ 317 (456)
T PRK07480 246 QRICRKYDILLVADEVIC--GFGRTGEWFGSQHFGIKP---DLM--TIAKGLTS-GYIPMGAVGVGDRVAEVLIEEGGEF 317 (456)
T ss_pred HHHHHHcCCEEEEechhh--CCCcCcchhhhhhcCCCC---Cee--eeehhhcc-CCccceEEEEcHHHHHHHhcCCCCc
Confidence 999999999999999999 99999998 788999999 999 99999986 4 888889999998842 1
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH-HHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCCCC
Q 046230 334 CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI-RENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYNPA 409 (489)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~~~ 409 (489)
.++.+|+ +||+.|++++++|+++ ..+++.+++ ++++++|+++|+++ ..+++. ...+.++.+.+..+.
T Consensus 318 ~~~~T~~--gnpl~~Aaa~a~L~~l-------~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~ 388 (456)
T PRK07480 318 NHGFTYS--GHPVAAAVALANLRIL-------RDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDK 388 (456)
T ss_pred ccCCCCC--cCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccc
Confidence 2444455 9999999999999999 456788999 58999999999875 232222 234666777663221
Q ss_pred -----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 -----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 -----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+.+.|+++||++.+ . .+.+||+|++.+|++|||+++++|+++++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~-------~-~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 389 ATRERFEAGGGVGTICRDHCFANGLIMRA-------V-GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred cccccCcchhhHHHHHHHHHHHCCcEEee-------c-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 124677889999999873 1 2679999999999999999999999999875
No 68
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-39 Score=335.94 Aligned_cols=345 Identities=16% Similarity=0.175 Sum_probs=267.2
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|++++....... -.++.
T Consensus 31 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~----~~~~~ 91 (466)
T PRK07030 31 IPIRRGEGVWLEDFE---------------GKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAG----FSHEP 91 (466)
T ss_pred ceEEeeeccEEEECC---------------CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccc----cCCHH
Confidence 468899999999999 99999995 45678889889999999999999865433211 13677
Q ss_pred HHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCe--------
Q 046230 148 HNELEECVARFVGK--PAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (489)
Q Consensus 148 ~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (489)
..+|.++|++.++. +.+++.+||++|+..+++.. .++..+|.....+|+.+...+.+++..
T Consensus 92 ~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p 171 (466)
T PRK07030 92 VIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKP 171 (466)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCc
Confidence 78999999998753 45666699999996666654 234457778888998887766654421
Q ss_pred ----EEEecCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC----hHHH
Q 046230 209 ----IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK----FPEI 262 (489)
Q Consensus 209 ----~~~~~~~-----------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~----l~~i 262 (489)
+..++.. +++++++.+.+. +.+.++||+|| +++..|.+.+ +++|
T Consensus 172 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~----------~~~iAAvi~EP~iqg~gG~~~~~~~yl~~l 241 (466)
T PRK07030 172 LLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH----------HDEIAAVIVEPLIQGAGGMRMYHPVYLKLL 241 (466)
T ss_pred cCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEecccccCCCcccCCHHHHHHH
Confidence 1112211 234566666531 25789999999 6888887644 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh----
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT---- 333 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~---- 333 (489)
+++|++||++||+||+++ +|||+|++ .++++|+.| ||+ +++|++|+ | |++++++++++.+...
T Consensus 242 r~lc~~~g~llI~DEV~T--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~g-G~~Pi~av~~~~ei~~~~~~~~~~~ 313 (466)
T PRK07030 242 REACDRYGVHLIHDEIAV--GFGRTGTMFACEQAGIRP---DFL--CLSKALTG-GYLPLAAVLTTDTVYQAFYDDYPTL 313 (466)
T ss_pred HHHHHHcCCEEEEeehhh--CcCccccchHHHhcCCCC---CEE--eeehhccC-CcccceEEEecHHHHHHHhcccccc
Confidence 999999999999999999 99999997 789999999 999 99999986 5 8889999999887531
Q ss_pred ---CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCC
Q 046230 334 ---CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYN 407 (489)
Q Consensus 334 ---~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~ 407 (489)
.++.+|+ +||+.|++++++|+++ +.+++.+++++++++|++.|+++ ..+.+. ...+.++.+.+..
T Consensus 314 ~~~~h~~T~~--gnpla~aaa~a~L~~i-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~ 384 (466)
T PRK07030 314 RAFLHSHSYT--GNPLACAAALATLDIF-------EQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQ 384 (466)
T ss_pred cccccCCCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEecc
Confidence 2344444 9999999999999999 55778999999999999999886 333222 2345666666632
Q ss_pred CC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 408 PA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 408 ~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. ....+.+.|+++|+++.+ .+ +.+||.||+.+|++||++++++++++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~-------~g-~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 385 DKASKTPYPWQERRGLKVYQHALERGALLRP-------LG-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CccccccCcchhHHHHHHHHHHHHCCeEEEe-------cC-CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 11 124688899999999973 22 589999999999999999999999999987
No 69
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.4e-39 Score=331.81 Aligned_cols=353 Identities=12% Similarity=0.116 Sum_probs=270.5
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..++..+.+++|+|+||.| |++|||| ++.+...++|+||+|.+|+++|+++.+..... ..
T Consensus 15 ~~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~ 75 (412)
T TIGR02407 15 RSFPTVFEKAKGSTLWDED---------------GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL----DM 75 (412)
T ss_pred CCCCceEEecccCEEEeCC---------------CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc----cc
Confidence 3567889999999999999 9999999 45577889999999999999999975543321 11
Q ss_pred cchhHHHHHHHHHHHh--C--CC-CEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC-------
Q 046230 144 TLMVHNELEECVARFV--G--KP-AAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA------- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~--g--~~-~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~------- 207 (489)
.++...+|.++|++.+ + .. ..+++ +||++|+..+++. ..++..+|.....+|+.+...+..++.
T Consensus 76 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 155 (412)
T TIGR02407 76 ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA 155 (412)
T ss_pred CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC
Confidence 3566788999999874 2 22 34454 7999999655554 345666777888999988776665432
Q ss_pred -----eEEEecC--------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcC
Q 046230 208 -----TIRVFQH--------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYK 270 (489)
Q Consensus 208 -----~~~~~~~--------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~ 270 (489)
.+..+|. ++++.+++.+.+... .+.+.++|++||++++.|.+.+ +++|+++|++||
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 228 (412)
T TIGR02407 156 GVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS-------GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHD 228 (412)
T ss_pred CCCCCCeEECCCCCccccchhHHHHHHHHHHhccC-------CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 1233343 336667777754210 1136789999999999998533 999999999999
Q ss_pred cEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHH
Q 046230 271 AYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPP 346 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~ 346 (489)
++||+||+++ +|||+|.+ .++++++.| ||+ +++|++|+.| |++++++++ +.+....+..+|+ +||+
T Consensus 229 ~llI~DEV~t--G~GRtG~~~a~~~~~v~P---Di~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~--gnpl 298 (412)
T TIGR02407 229 ILLIVDDIQA--GCGRTGTFFSFEPAGIEP---DIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFR--GNNL 298 (412)
T ss_pred CEEEEechhh--CCCccchhHHhcccCCCC---CEE--EechhccCCccceeEEEEchhh-hccCCCccCCCCC--ccHH
Confidence 9999999999 99999988 778899999 999 8999998745 889998876 5554334444454 9999
Q ss_pred HHHHHHHHHHH-HHccCCCchHHHHHHHHHHHHHHHHHHHHhC----C-CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh
Q 046230 347 AAEQIISAIKV-ILGEDGSSRGAQKLARIRENSNFFRSELQKM----G-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLR 420 (489)
Q Consensus 347 ~~aa~~a~L~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 420 (489)
.|+++.++|++ + ..+++.+++++++++++++|+++ + +.......+.++++.+........+.+.|++
T Consensus 299 ~~aaa~a~l~~~i-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~ 371 (412)
T TIGR02407 299 AFVTATAALEYYW-------SDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFE 371 (412)
T ss_pred HHHHHHHHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHHH
Confidence 99999999996 6 44678899999999999998864 2 3333334577888888765556789999999
Q ss_pred CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 421 QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 421 ~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+||.+.+.+ ...+.+||+|++.+|++|+++++++|+++++
T Consensus 372 ~Gv~v~~~~-----~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 372 NGLIIETSG-----PNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCEEeccC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 999997422 2247899999999999999999999999875
No 70
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=331.40 Aligned_cols=352 Identities=13% Similarity=0.153 Sum_probs=269.4
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
|..|.+++|+|+||+| |++||||. +.+...++|+||++.+|+.+|++++...... ...++
T Consensus 23 p~~i~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~----~~~~~ 83 (425)
T PRK07495 23 QIYADRAENAEIWDKE---------------GRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQ----VVPYE 83 (425)
T ss_pred CeeEEeeeecEEEeCC---------------CCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccC----ccCCH
Confidence 6778999999999999 99999995 4566788888999999999999986532211 12356
Q ss_pred hHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC-------------
Q 046230 147 VHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA------------- 207 (489)
Q Consensus 147 ~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~------------- 207 (489)
...++.++|++.++. +.+++.+||++|+..+++. ..++..+|.....+|+.+.....+++-
T Consensus 84 ~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 163 (425)
T PRK07495 84 NYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMP 163 (425)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCC
Confidence 678899999998864 3566669999999655553 456667777888899987665554331
Q ss_pred eEEEecCCC----------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEE
Q 046230 208 TIRVFQHNT----------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYI 273 (489)
Q Consensus 208 ~~~~~~~~d----------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~l 273 (489)
.+..++.++ ++++++.+.... .+.+.++|++||+++.+|.+.+ +++|+++|++||+++
T Consensus 164 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~--------~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~ll 235 (425)
T PRK07495 164 DVYHVPFPVELHGVSVEQSLAALDKLFKADV--------DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILL 235 (425)
T ss_pred CeEEecCCcccccccHHHHHHHHHHHHHhcc--------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 122233332 334455553210 1246889999999998885533 899999999999999
Q ss_pred EEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHH
Q 046230 274 YLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAE 349 (489)
Q Consensus 274 i~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~a 349 (489)
|+||+|+ +||++|.+ .++++++.| ||+ ||||++++ | |++++++++++.+....+..+|+ +||+.++
T Consensus 236 I~DEv~t--G~gr~G~~~a~~~~gv~p---Di~--tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~~T~~--~~pl~~a 305 (425)
T PRK07495 236 IADEVQT--GFARTGKLFAMEHHEVAA---DLT--TMAKGLAG-GFPLAAVTGRAEIMDAPGPGGLGGTYG--GNPLGIA 305 (425)
T ss_pred EEechhh--cCCcCCCceeecccCCCC---CEE--eehhhhcC-CccceEEEEcHHHHhccCCCCcCCCCC--CCHHHHH
Confidence 9999999 89999987 678889988 998 99999986 6 99999999999887655555554 9999999
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCC--CCCCeEEEEeCCCC-------cHHHHHHHH
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGD--NDSPVMPIMLYNPA-------KIPAFSREC 418 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~--~~~~~~~~~~~~~~-------~~~~~~~~l 418 (489)
+++++|+++ ..+++.+++++++++++++|+++ .++.+.+ ..+.++++.+..+. ....+.+.|
T Consensus 306 aa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~ 378 (425)
T PRK07495 306 AAHAVLDVI-------EEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKA 378 (425)
T ss_pred HHHHHHHHH-------HhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHH
Confidence 999999999 45678999999999999999876 2332222 33667777764321 144688899
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+++|+++...+ ...+.+||.||+.+|++++|+++++|+++++++.
T Consensus 379 ~~~Gvl~~~~g-----~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 379 LEKGLILLTCG-----VHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred HHCCeEEeecC-----CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99999987321 1248899999999999999999999999998754
No 71
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=332.59 Aligned_cols=349 Identities=16% Similarity=0.182 Sum_probs=278.8
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..++.++.+++|.|+||.| |++||||+| +..+.++|+||+|.+++.+++++++.... ..
T Consensus 11 ~~~~~~~~~~~G~~~~d~d---------------g~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~---~~-- 70 (400)
T PTZ00125 11 HPLPVVLKRGKGVFVWDVE---------------GKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR---AF-- 70 (400)
T ss_pred CCCCccEEeeecCEEEeCC---------------CCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccc---cc--
Confidence 3567788999999999999 999999965 35567888899999999999998765431 11
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc-----------CCCCEEEEcCCCchHHHHHHHhcCC-----
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM-----------RKGSLIISDSLNHNSIVNGARGSGA----- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~-----------~~g~~Vl~~~~~h~~~~~~~~~~g~----- 207 (489)
.++...++++.++++.+.+.+++++||++||..+++.+. ++.++|.++..+|+.+...+...+.
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 256778999999999988888999999999977777653 2456788899999998877765542
Q ss_pred -------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 208 -------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
.+..++++|+++|++.++. .+.++|++|++++++|.+.+ +++|+++|++||+++|+|
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~------------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D 218 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQD------------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVD 218 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCC------------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2346778899999988852 25678889999999999887 999999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQII 352 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~ 352 (489)
|+|+ ++|++|++ ..++.++.| |++ ++||++++.+ |++++++++++.+.......+++ .+|+.++++.
T Consensus 219 ev~~--g~g~~G~~~~~~~~~~~p---d~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~ 289 (400)
T PTZ00125 219 EIQT--GLGRTGKLLAHDHEGVKP---DIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYG--GNPLACAVAV 289 (400)
T ss_pred cccc--CCCccchhhHHHhcCCCC---CEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCC--cCHHHHHHHH
Confidence 9998 89999986 455678877 888 8999998633 89999999999887554444454 8999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC--CCcHHHHHHHHhhCCceEE
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN--PAKIPAFSRECLRQNVAVV 426 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~ 426 (489)
++|+.+. .++..++++++++++++.|+++ ++.......+.++++.+.. .....++++.|+++||.+.
T Consensus 290 ~~l~~i~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~ 362 (400)
T PTZ00125 290 EALEVLK-------EEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAK 362 (400)
T ss_pred HHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEe
Confidence 9999883 3456778888899999999875 3322122346666776653 2356689999999999997
Q ss_pred eecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 427 TVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 427 ~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+ .+.+++||++++.+|++++++++++|.++++++.
T Consensus 363 ~-------~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 363 P-------THDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred e-------cCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 3 2357899999999999999999999999988763
No 72
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=335.42 Aligned_cols=359 Identities=14% Similarity=0.129 Sum_probs=267.2
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++ .+++++|+|+||+| |++||||.+ .+...++|+||+|.+|+.+|+++....... . -.
T Consensus 13 ~~p-~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~---~~ 72 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQN---------------GNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-Q---FT 72 (447)
T ss_pred CCC-eEEeeeeeEEEeCC---------------CCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-c---cC
Confidence 555 58999999999999 999999954 466788988999999999999985433211 1 13
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCeE----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGATI---- 209 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~~---- 209 (489)
++...+|.++|++.++. +..++.+||++|+..+++.. .++..+|.....+|+.+...+..++...
T Consensus 73 ~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 152 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQR 152 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccc
Confidence 57778999999998864 34555699999997777654 2344566677888888776665544210
Q ss_pred --------EEe--cC------C---------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC-CCCCC----h
Q 046230 210 --------RVF--QH------N---------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME-GELCK----F 259 (489)
Q Consensus 210 --------~~~--~~------~---------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~-G~~~~----l 259 (489)
..+ +. + +++.+++.++.. .+.+.++||+||+++.. |.+.| +
T Consensus 153 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~---------~~~~iAAvi~EPi~g~~gG~~~p~~~fl 223 (447)
T PRK06917 153 FVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI---------GAEHIAAFIAEPIIGAAGAAVVPPKGYY 223 (447)
T ss_pred CCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEeccccCcCceecCCHHHH
Confidence 111 11 1 234555555431 12468999999999854 45533 9
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhhCC
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYTCP 335 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~~~ 335 (489)
++|+++|++||+++|+||+++ +|||+|.+ +++++++.| ||+ +|+|++|+ +.|++++++++++.+.....
T Consensus 224 ~~lr~lc~~~g~llI~DEv~t--GfGRtG~~~a~~~~gv~P---Di~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~ 296 (447)
T PRK06917 224 KVIKEICDHYDILFIADEVMT--GLGRTGAMFAMEHWGVEP---DIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSR 296 (447)
T ss_pred HHHHHHHHHcCCEEEEechhh--CcCcccchhhHHhcCCCC---CEE--EeeehhccCCcceEEEEEcHHHHHHHhccCc
Confidence 999999999999999999999 89999998 778999999 999 99999975 23888999999998864322
Q ss_pred C--cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCC-
Q 046230 336 A--HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNP- 408 (489)
Q Consensus 336 ~--~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~- 408 (489)
. +..+.++||+.|++++++|+++ ..+++.+++++++++|++.|+++ .++++ ....+.++.+.+..+
T Consensus 297 ~~~~~~T~~gnpl~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~ 369 (447)
T PRK06917 297 SIMSGHTLSANPLSAATALAVLEYM-------EKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADK 369 (447)
T ss_pred ccccccCCCCCHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccC
Confidence 1 1123349999999999999999 45678999999999999999886 23332 233466666666321
Q ss_pred ----------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 409 ----------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 ----------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....+.+.|+++||++.+.+........+.+||+|++.+|++|||+++++|+++++++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 370 KTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 12457888999999999853221112234789999999999999999999999999887
No 73
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-39 Score=331.93 Aligned_cols=349 Identities=11% Similarity=0.109 Sum_probs=265.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..|++++|+|+||.| |++||||. +.+...++|+||++++|+.+|++++...... .-.
T Consensus 21 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~----~~~ 81 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLED---------------GSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG----GLT 81 (422)
T ss_pred CCCeeEEeceeeEEEECC---------------CCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC----CcC
Confidence 366789999999999999 99999994 4577888988999999999999986543211 013
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...+|.++|++.++. +.+++.+||++|+..+++... ++..+|.....+|+.+...+.+++..
T Consensus 82 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 161 (422)
T PRK05630 82 HEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHS 161 (422)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccc
Confidence 56678999999998753 566777999999966655432 23456778888898776666554321
Q ss_pred --------EEEecCC-----CHHHHH---HHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hHHHHHHHH
Q 046230 209 --------IRVFQHN-----TPSHLE---EVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 209 --------~~~~~~~-----d~~~Le---~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~~i~~l~~ 267 (489)
...++.+ +.++++ +.++..+. .+.++||+||+ ++..|.+.| +++|+++|+
T Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~ 232 (422)
T PRK05630 162 LWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCD 232 (422)
T ss_pred cccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---------hceEEEEEechhcCcCCcccCCHHHHHHHHHHHH
Confidence 1111111 122222 22222111 26899999996 887776643 999999999
Q ss_pred HcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhh------CCCc
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYT------CPAH 337 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~------~~~~ 337 (489)
+||++||+||||+ ++||+|++ +++++++.| ||+ ||+|++++ ++|++++++++++.+... .++.
T Consensus 233 ~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~ 305 (422)
T PRK05630 233 KHDILLIADEIAT--GFGRTGELFATLAAGVTP---DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGP 305 (422)
T ss_pred HcCCEEEEeccee--CCCcCchhhHHHhcCCCC---Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCC
Confidence 9999999999999 99999998 778899999 999 99999954 348899999999988532 2344
Q ss_pred ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCCCCcHHHH
Q 046230 338 LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYNPAKIPAF 414 (489)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~~~~~~~~ 414 (489)
+|+ +||+.|++++++|+++ ..++.++++++++++|++.|+++ ..+.++ ...+.++++.+..+.....+
T Consensus 306 T~~--g~Pla~aaa~aaL~~l-------~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~ 376 (422)
T PRK05630 306 TFM--ANPLACAVAHASLEII-------ETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEA 376 (422)
T ss_pred CCc--CCHHHHHHHHHHHHHH-------HhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHH
Confidence 454 9999999999999999 33567889999999999988865 222222 23478888888765556789
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.|+++|+++.+ .+ +++||.||+.+|++|+|+++++|+++++.
T Consensus 377 ~~~~~~~Gl~~~~-------~g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 377 TQAAVDHGVWLRP-------FG-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHCCeEEEe-------cC-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 9999999999873 22 68999999999999999999999998864
No 74
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=332.34 Aligned_cols=354 Identities=16% Similarity=0.168 Sum_probs=267.5
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.|..+++++|+|+||.| |++||||. +.+...++|+||++.+|+.+|+++....... ....+
T Consensus 24 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~---~~~~~ 85 (449)
T PRK07481 24 PPIIIVRGDGVYVYDID---------------GKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTF---DGTTH 85 (449)
T ss_pred CCceEEeccccEEEeCC---------------CCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecc---cccCC
Confidence 46788999999999999 99999994 4566788888999999999999985533210 01246
Q ss_pred hhHHHHHHHHHHHhC---CCCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 146 MVHNELEECVARFVG---KPAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
+...++.++|++.++ .+.+++.+||++|+..+++... ++..+|.+...+|+.+...+..++..
T Consensus 86 ~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~ 165 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRN 165 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccc
Confidence 777899999999884 2456666999999966665432 34457778888898776555443211
Q ss_pred -------EEEe--------cCC--CHHHHHHHHH----HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHH
Q 046230 209 -------IRVF--------QHN--TPSHLEEVLR----EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEII 263 (489)
Q Consensus 209 -------~~~~--------~~~--d~~~Le~~l~----~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~ 263 (489)
+..+ +.+ |.+++++.+. +.+... .+.+.++||+||+++..|.+.| +++|+
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~-----~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr 240 (449)
T PRK07481 166 YEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQ-----GPDTIAAFIAEPVQGAGGVIVPPANFWPLVR 240 (449)
T ss_pred cCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc-----CCCcEEEEEEecccCCcCCccCCHHHHHHHH
Confidence 1111 123 5555544332 211110 1257899999999999888755 99999
Q ss_pred HHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh-----
Q 046230 264 AICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT----- 333 (489)
Q Consensus 264 ~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~----- 333 (489)
++|++||++||+||+++ +|||+|.+ .++++|+.| ||+ +++|++|+ | |++++++++++.+...
T Consensus 241 ~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~g-G~~Pi~av~~~~~i~~~~~~~~~~~~ 312 (449)
T PRK07481 241 EVCDRHGILLIADEVVT--GFGRTGSWFGSRGWGVKP---DIM--CLAKGITS-GYVPLGATMVNARIADAFEANADFGG 312 (449)
T ss_pred HHHHHcCCEEEEeehhh--CcCcCchhhHhhhcCCCC---CEE--EEeecccC-CCcCceEEEEcHHHHHHHhccCcccc
Confidence 99999999999999999 99999987 788999999 999 99999986 4 8889999999988642
Q ss_pred --CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCC
Q 046230 334 --CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYN 407 (489)
Q Consensus 334 --~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~ 407 (489)
.++.+|+ +||+.|++++++|+++ ..+++.+++++++++|++.|+++ .++++. ...+.++.+.+..
T Consensus 313 ~~~h~~T~~--gnpl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~ 383 (449)
T PRK07481 313 AIMHGYTYS--GHPVACAAALATLDIV-------VREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVA 383 (449)
T ss_pred ccccCCCCC--CCHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecc
Confidence 2333444 9999999999999999 56789999999999999999886 343332 2346666776642
Q ss_pred C-----------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 408 P-----------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 408 ~-----------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+ .....+.+.|+++||++.+. + +.+||+|++.+|++|||+++++|+++++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 384 DKATREPIDPSKGYANAVADVARENGVLVRPS-------G-TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred cccccCCCCchhHHHHHHHHHHHhCCeEEEec-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 1 12346888899999999732 2 4699999999999999999999999998753
No 75
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.1e-39 Score=333.61 Aligned_cols=345 Identities=14% Similarity=0.158 Sum_probs=263.1
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|++++....... -.++.
T Consensus 48 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~----~~~~~ 108 (472)
T PRK08742 48 VPIARGEGAWLVGHD---------------GRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAG----FTHEP 108 (472)
T ss_pred eeEEecccCEEEeCC---------------CCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccc----cCCHH
Confidence 457999999999999 99999995 44667888889999999999999865433211 13566
Q ss_pred HHHHHHHHHHHhCC-------CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe---
Q 046230 148 HNELEECVARFVGK-------PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT--- 208 (489)
Q Consensus 148 ~~~l~~~la~~~g~-------~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~--- 208 (489)
..+|.++|++.++. +.+++.+||++||..+++... ++..+|.+...+|+.+...+..++..
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~ 188 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYR 188 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccc
Confidence 78999999998753 356666999999966665432 24557778888998887666655421
Q ss_pred ---------EEEecCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC---
Q 046230 209 ---------IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK--- 258 (489)
Q Consensus 209 ---------~~~~~~~d-----------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~--- 258 (489)
+..++.++ ++.+++.+... +.+.++||+|| +++..|.+.+
T Consensus 189 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~iAAvI~EPviqg~gG~~~~p~~ 258 (472)
T PRK08742 189 RVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS----------PGEICALILEPRLQCAGGMRMHHPA 258 (472)
T ss_pred cccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEccccccCCCcccCCHH
Confidence 11122221 34455555421 25789999999 6887787644
Q ss_pred -hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh
Q 046230 259 -FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY 332 (489)
Q Consensus 259 -l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~ 332 (489)
+++|+++|++||++||+||+++ +|||+|.+ .++++|+.| ||+ +++|++|+ | |++++++++++.+..
T Consensus 259 fl~~lr~lc~~~gillI~DEV~T--GfGRtG~~~a~e~~gv~P---Div--~~gKgl~g-G~~Plaav~~~~ei~~~~~~ 330 (472)
T PRK08742 259 YLRRARELCDAHGAFLIADEIAT--GFGRTGTLFACEQAGVMP---DLL--CLSKGLTG-GFLPLSAVLATQQLYDAFLD 330 (472)
T ss_pred HHHHHHHHHHHcCCEEEEechhh--CCCCCccchHHHhcCCCC---CEE--EEcccccC-CCCCcceeeccHHHHHHhhc
Confidence 9999999999999999999999 99999987 789999999 999 99999976 5 888899999988753
Q ss_pred h------CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEE
Q 046230 333 T------CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPI 403 (489)
Q Consensus 333 ~------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~ 403 (489)
. .++.+|+ +||+.|++++++|+++ ..+++.+++++++++|++.++.+ .++++++ ..+.++.+
T Consensus 331 ~~~~~~~~h~~T~~--gnpl~~Aaa~a~L~~i-------~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~gi 401 (472)
T PRK08742 331 DSRERAFLHSHSYT--GNPLACAAALATLDIF-------ADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAF 401 (472)
T ss_pred cCccCccCcCCCCC--ccHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEE
Confidence 1 2334444 9999999999999999 56778999999999999877765 3333322 34666777
Q ss_pred EeCCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 404 MLYNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 404 ~~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.... ....+.+.|+++||++.+ .+ +++||.||+.+|++|||+++++|+++++++
T Consensus 402 el~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~-------~g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 402 ELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP-------LG-DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EeccCccccccCCchhHHHHHHHHHHHHCCeEEEe-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 664211 124678889999999973 22 689999999999999999999999999764
No 76
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-39 Score=335.14 Aligned_cols=348 Identities=16% Similarity=0.153 Sum_probs=267.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
++..+.+++|+|+||.| |++||||.+ .+...++|+||+|.+|+.+|++++...... .-.+
T Consensus 38 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~----~~~~ 98 (460)
T PRK06916 38 DPLIIERGEGRKLYDVN---------------GNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL----GLAN 98 (460)
T ss_pred CCeeEEeccccEEEeCC---------------CCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc----ccCC
Confidence 46778999999999999 999999954 456778888999999999999986543211 1136
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe------
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (489)
+...+|.++|++.++. +..++.+||++|+..+++... ++..+|.....+|+.+...+.+++..
T Consensus 99 ~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~ 178 (460)
T PRK06916 99 VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVY 178 (460)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccccc
Confidence 7778999999999864 456667999999966665432 24456778888999887766655421
Q ss_pred ------EEEecCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC----hH
Q 046230 209 ------IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~~~-----------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~----l~ 260 (489)
+..++.. +++++++.++.. +.+.++||+|| +++..|.+.+ |+
T Consensus 179 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~iAAvi~EP~iqg~gG~~~~~~~fl~ 248 (460)
T PRK06916 179 SSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK----------HEEIAAIIVEPLVQGAGGMITMPKGYLK 248 (460)
T ss_pred CCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC----------CCcEEEEEEeccccCCCCcccCCHHHHH
Confidence 1112111 234555555431 25789999999 6988887744 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh--
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT-- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~-- 333 (489)
+|+++|++||++||+||+++ +|||+|.+ +++++|+.| ||+ +++|++++ | |++++++++++.+...
T Consensus 249 ~lr~lc~~~g~llI~DEV~T--G~GRtG~~~a~~~~gv~P---Div--~~gK~l~g-G~~Pi~av~~~~ei~~~~~~~~~ 320 (460)
T PRK06916 249 GLRNLCTKYNVLFITDEVAT--GFGRTGKMFACEHENVTP---DIM--TAGKGLTG-GYLPIAITVTTDEIYNAFYGDYE 320 (460)
T ss_pred HHHHHHHHcCCEEEeechhh--CCCcCchhhHHHhcCCCC---Cee--eeehhhhc-CccccceeeecHHHHHHhhcccc
Confidence 99999999999999999999 99999998 788999999 999 99999986 5 7889999999877531
Q ss_pred -----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee--CCCCCCeEEEEe
Q 046230 334 -----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL--GDNDSPVMPIML 405 (489)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~--~~~~~~~~~~~~ 405 (489)
.++.+|+ +||+.|++++++|+++ ..+++++++++++++|++.|+++ ..+.+ ....+.++.+.+
T Consensus 321 ~~~~~~~~~T~~--gnpl~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel 391 (460)
T PRK06916 321 EQKTFFHGHSYT--GNPLGCAVALANLELY-------EKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIEL 391 (460)
T ss_pred ccCccccCCCCC--CCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEe
Confidence 2333444 8999999999999999 45678999999999999999986 22222 223356666666
Q ss_pred CCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 406 YNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 406 ~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
..+. ....+.+.|+++||++.+ .+ +.+||.||+.+|++|||+++++|+++++++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~-------~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 392 VKNKETKEPFEWTERVGVQVCKRSRELGMLTRP-------LG-NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred ecccccccCCCchhhHHHHHHHHHHHCCeEEEe-------cC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 4321 134788999999999973 22 6899999999999999999999999998753
No 77
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=333.39 Aligned_cols=350 Identities=16% Similarity=0.178 Sum_probs=264.2
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..|.+++|+|+||+| |++||||. +.+...++|+||++.+|+.+|+.+........ ...
T Consensus 32 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~---~~~ 93 (466)
T PRK07036 32 EGSLVIVEAEGIYVTDAD---------------GRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG---DMT 93 (466)
T ss_pred CCCceEEeCceeEEEECC---------------CCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc---ccC
Confidence 356788999999999999 99999994 45667888889999999999999854332110 023
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...++.++|++..+. +.+++.+||++|+..+++... ++..+|.....+|+.+......++..
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~ 173 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTE 173 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccccc
Confidence 67778999999998764 455666999999966665431 23456667888898876655544321
Q ss_pred -------EEEecCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 209 -------IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 209 -------~~~~~~~d-----------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
+..++..+ .+.+++.+.. ..+.+.++||+||+++..|.+.| ++
T Consensus 174 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------~~~~~iAavi~EPv~g~gG~~~p~~~yl~ 244 (466)
T PRK07036 174 FDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS---------LGADNIAAFIAEPILGSGGVIVPPPGYHA 244 (466)
T ss_pred ccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH---------cCCCceEEEEEeCCcCCCCCccCCHHHHH
Confidence 11121111 1233443332 11357899999999999998876 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-ccc-ccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh-
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCE-LLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~-~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~- 333 (489)
+|+++|+|||+++|+|||++ +|||+|+. .++ ++|+.| ||+ |++|++|+ | |++++++++++.+...
T Consensus 245 ~lr~lc~~~g~llI~DEV~t--GfGRtG~~~~~~~~~gv~P---Div--t~gK~l~g-G~~Pi~av~~~~~i~~~~~~~~ 316 (466)
T PRK07036 245 RMREICRRYDILYISDEVVT--GFGRLGHFFASEAVFGIQP---DII--TFAKGLTS-GYQPLGAVIISERLLDVISGPN 316 (466)
T ss_pred HHHHHHHHcCCEEEEeechh--CCCcCchhhhhhhhcCCCC---CEE--EEcccccc-CccccEEEEEcHHHHHHHhccc
Confidence 99999999999999999999 99999975 665 789999 999 99999986 5 8888999999988632
Q ss_pred ------CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee--CCCCCCeEEEE
Q 046230 334 ------CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL--GDNDSPVMPIM 404 (489)
Q Consensus 334 ------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~--~~~~~~~~~~~ 404 (489)
.++.+|+ +||+.|++++++|+++ ..+++.+++++++++|++.|+++ ..+++ ....+.++.+.
T Consensus 317 ~~~~~~~~~~T~~--gnpl~~aaa~a~Le~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve 387 (466)
T PRK07036 317 AKGNVFTHGFTYS--GHPVACAAALKNIEIM-------EREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVE 387 (466)
T ss_pred CcCcccccCCCCC--CCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEE
Confidence 2333444 9999999999999999 45679999999999999999876 22222 22346667776
Q ss_pred eCCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+..+. ....+.+.|+++||++.+ .+ +.+||+|++.+|++|||+++++++++++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~-------~~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 388 CVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP-------LE-HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EccCccccCCCCchhHHHHHHHHHHHHCCcEEee-------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 64221 134688899999999873 22 579999999999999999999999999876
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=329.82 Aligned_cols=339 Identities=20% Similarity=0.246 Sum_probs=268.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++.++.+++|+|+||+| |++||||+|++ ...++++||++.+|+.++++++.... . ...
T Consensus 10 ~~~~~~~~~~G~~~~d~~---------------G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~---~~~ 69 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNN---------------GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVS--N---LFT 69 (377)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccc--c---ccC
Confidence 467788999999999999 99999997774 23344568999999999999854321 1 123
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcCC------------eE
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARGSGA------------TI 209 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g~------------~~ 209 (489)
+++..++++.+++..+.+.+++++||+++|..+++.. .+++++|..+..+|+++..++..++. .+
T Consensus 70 ~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 70 NSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 5667778888877766677888899999997776643 45666888889999998877776553 23
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccc
Q 046230 210 RVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
..++++|++++++.+.. +.++|++|++++++|...+ +++|+++|++||+++|+||+|+ +||
T Consensus 150 ~~~~~~d~~~l~~~~~~-------------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~--g~g 214 (377)
T PRK02936 150 THVPFNDIKALKEVMNE-------------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT--GIG 214 (377)
T ss_pred eEeCCCCHHHHHHhccC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc--CCC
Confidence 46788899999987753 4678999999998886643 9999999999999999999998 899
Q ss_pred CCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHcc
Q 046230 286 KTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGE 361 (489)
Q Consensus 286 ~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~ 361 (489)
++|++ ..+.+++.| |++ ||||++++ | |++++++++++.+....+..+++ +||+.++++.++|+.+
T Consensus 215 ~~g~~~~~~~~~~~~---di~--t~sK~l~~-G~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~--- 283 (377)
T PRK02936 215 RTGTLFAYEQFGLDP---DIV--TVAKGLGN-GIPVGAMIGKKELGTAFGPGSHGSTFG--GNPLAMAAAKEVLQVI--- 283 (377)
T ss_pred cCchhhHHHhhCCCC---cEE--EEcccccC-CCccEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHH---
Confidence 99987 456778877 887 99999985 5 99999999999887555444444 8999999999999987
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCC
Q 046230 362 DGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLL 437 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~ 437 (489)
..++.+++++++++++++.|++. +++... ...+.++++.+... ...+.+.|.++||.+.+ .+.
T Consensus 284 ----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--~~~~~~~l~~~gv~v~~-------~g~ 350 (377)
T PRK02936 284 ----KQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE--VAPVIEQLREEGLLVLS-------AGP 350 (377)
T ss_pred ----HhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch--HHHHHHHHHHCCeEEec-------CCC
Confidence 34567788999999999999874 343221 23466777776543 67789999999999983 345
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 438 ARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+++||+|++.+|++++++++++|+++
T Consensus 351 ~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 351 NVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred CEEEEECCcccCHHHHHHHHHHHHHh
Confidence 78999999999999999999999875
No 79
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-39 Score=331.13 Aligned_cols=350 Identities=18% Similarity=0.235 Sum_probs=266.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||.| |++|||| ++.+...++|+||++.+|+.+|+++....... . -.
T Consensus 35 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~---~~ 95 (441)
T PRK05769 35 WYPLVIERGEGVWVEDVD---------------GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLT-D---FY 95 (441)
T ss_pred CCCeeEEecceEEEEeCC---------------CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCc-c---cC
Confidence 456778999999999999 9999999 45577889999999999999999985432211 1 12
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC-----------
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA----------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (489)
++...+|.++|++.++. +.+++.+||++|+..+++. .+++..+|.....+|+.+...+..++.
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPL 175 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCC
Confidence 56678999999998862 4566669999999655553 456777777888899988766655431
Q ss_pred --eEEEecCC----------CH--------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHH
Q 046230 208 --TIRVFQHN----------TP--------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEII 263 (489)
Q Consensus 208 --~~~~~~~~----------d~--------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~ 263 (489)
.+..++.+ +. +.+++.+.+ .. ..+.+.++||+|+++++.|.+.| |++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~---~~----~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~ 248 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFK---KL----VPPEEVAAIIVEPIQGEGGYVVPPKNFFKELR 248 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHh---hc----cCCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 12222221 22 223331211 00 01247899999999999999888 99999
Q ss_pred HHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccc
Q 046230 264 AICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLY 339 (489)
Q Consensus 264 ~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~ 339 (489)
++|++||+++|+||+|+ ++|++|.+ .++++++.| |++ +|+|++|+ | |++++++++++.+ ...+..+|
T Consensus 249 ~l~~~~g~lli~DEv~t--G~gr~G~~~a~~~~gv~p---Div--t~~K~l~~-G~p~gav~~~~~i~~~~-~~~~~~T~ 319 (441)
T PRK05769 249 KLADKYGILLIDDEVQT--GMGRTGKMFAIEHFGVEP---DII--TLAKAIAG-GLPLGAVIGRAELMFLP-PGSHANTF 319 (441)
T ss_pred HHHHHcCCEEEEechhh--CCCcccceehhhccCCCC---CEE--EEcccccC-CcccEEEEEehhhhhcC-CCCCCCCC
Confidence 99999999999999999 89999987 678889988 999 89999986 5 8899999987643 23344455
Q ss_pred ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeCC--CCCCeEEEEeCCC------C
Q 046230 340 ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLGD--NDSPVMPIMLYNP------A 409 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~~--~~~~~~~~~~~~~------~ 409 (489)
+ +||+.+++++++|+++ +. ++++++++++++|++.|+++. ++++.+ ..+.++++.+..+ .
T Consensus 320 ~--g~p~~~aaa~a~L~~l-------~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~ 389 (441)
T PRK05769 320 G--GNPVAAAAALATLEEL-------EE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPK 389 (441)
T ss_pred C--cCHHHHHHHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHH
Confidence 4 8999999999999998 45 889999999999999998762 443323 3356677766433 1
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+.+.|+++||++.+ .+.+.+||+|++.+|++|||+++++++++++++
T Consensus 390 ~~~~~~~~~~~~Gil~~~-------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 390 LRDKVLYEAFKRGLLLLG-------AGKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHhCCcEEec-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345788899999999873 344789999999999999999999999998753
No 80
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=9.5e-39 Score=320.71 Aligned_cols=348 Identities=44% Similarity=0.722 Sum_probs=286.4
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP 179 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~ 179 (489)
++||||||++|||.+.+ |++.+++++.+++++.+.++++...|..+...++++.++++++.++.+++++|++++..++.
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 1 KKVLNFCSNDYLGLANH-PEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLS 79 (349)
T ss_pred CCceecccCCccccCCC-HHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHH
Confidence 46999999999999965 89999999999998765555555567788899999999999999889999999999887788
Q ss_pred hhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh
Q 046230 180 VLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF 259 (489)
Q Consensus 180 al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l 259 (489)
++.++|+.|+++.++|.++...++..|++++.++..|.+++++++++.. ++.++++++++++++++|...++
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--------~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREAR--------RPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhh--------ccCCCeEEEEeccccCCCCccCH
Confidence 8889999999999999999999999999999888889999999887631 01356788889999999999999
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCccc
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLY 339 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~ 339 (489)
++|+++|+++|+++|+||+|++|.++..+... ...+..+.+.|++++|++|+++++||++++++++++.+......+.+
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~ 230 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIF 230 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhc
Confidence 99999999999999999999877676555432 13333445669999999999998899999999998888765554445
Q ss_pred ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHh
Q 046230 340 ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 419 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 419 (489)
+.+.++..++++.++|+.+. ..++.++++.++.+++.+.|+++|+++.++..+.+.++....+....++.+.|+
T Consensus 231 ~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 304 (349)
T cd06454 231 STSLPPAVAAAALAALEVLQ------GGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALL 304 (349)
T ss_pred cCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHH
Confidence 55688889999999998873 236778999999999999999998887665555544444433445678999999
Q ss_pred hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 420 RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 420 ~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
++||.+.+..++..+.+.+.+|++++..+|++++++++++|+++
T Consensus 305 ~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 305 ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 99999987666544444579999998889999999999999864
No 81
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-39 Score=331.27 Aligned_cols=357 Identities=13% Similarity=0.151 Sum_probs=266.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++||||. +.+...++|+||++.+|+.+|+.+....... .-.
T Consensus 39 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~----~~~ 99 (459)
T PRK06931 39 KLPLAIAKAQGVWVTDVE---------------GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL----DLT 99 (459)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc----ccC
Confidence 457788999999999999 99999994 4577889999999999999999862211111 113
Q ss_pred chhHHHHHHHHHHHhCCC----CEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC---------
Q 046230 145 LMVHNELEECVARFVGKP----AAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA--------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~----~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (489)
++...++.++|++.++.. ..+++ +||++|+..+++. .+++..+|.....+|+.+...+.+++.
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 179 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNG 179 (459)
T ss_pred CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCC
Confidence 677788999999988632 24455 7999999655553 456777777888899988766655431
Q ss_pred ---eEEEecCC-------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 046230 208 ---TIRVFQHN-------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 208 ---~~~~~~~~-------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~ 267 (489)
.+..++.+ +.+.+++.+++.+.... ..+.+.++||+||+++..|.+.+ |++|+++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 180 LMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVE---SGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhh---cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 11222222 23444444444332100 01246899999999998887754 999999999
Q ss_pred HcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCC
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSI 343 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~ 343 (489)
+||++||+|||++ +|||+|.+ +++++|+.| ||+ |++|++|+ | |++++++++ +.+....+..+|+ +
T Consensus 257 ~~g~LlI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--t~gK~l~g-G~Pi~av~~~~~~-~~~~~~~~~~T~~--g 325 (459)
T PRK06931 257 KHGILLIVDEVQA--GFARTGKMFAFEHAGIEP---DII--VMSKAVGG-GLPLAVLGIKKEF-DAWQPGGHTGTFR--G 325 (459)
T ss_pred HcCCEEEEecchh--cCCcCchHHHhhhcCCCC---CEE--EecccccC-CcceeeeeeHHHH-hhccCCCCCCCCC--C
Confidence 9999999999999 99999997 889999999 999 99999987 7 777777664 6664434444554 9
Q ss_pred CHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCC-----------
Q 046230 344 SPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNP----------- 408 (489)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~----------- 408 (489)
||+.|++++++|+++ +.+++.+++++++++|++.|+++ .++++ ....+.++.+.+..+
T Consensus 326 npla~aaala~L~~l-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~ 398 (459)
T PRK06931 326 NQLAMATGLTTLKIL-------KEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYP 398 (459)
T ss_pred CHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCC
Confidence 999999999999999 55678999999999999999886 23332 233466677766422
Q ss_pred ---CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 409 ---AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 ---~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....+.+.|+++|+++.+.+ ...+++||.||+.+|++|+|+++++|+++++++
T Consensus 399 ~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 399 ADGELAAAIQKACFENGLLLERGG-----RNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred ccHHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 113468888999999987421 224789999999999999999999999998764
No 82
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=5.3e-39 Score=330.21 Aligned_cols=357 Identities=14% Similarity=0.154 Sum_probs=266.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+|+||.| |++||||. +.+...++|+||+|++|+.+|+.+....... .-.
T Consensus 20 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~----~~~ 80 (442)
T TIGR00709 20 KLPTAFAKAQGCWVTDVE---------------GKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL----DLT 80 (442)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc----ccC
Confidence 457788999999999999 99999994 4567888988999999999999874322211 123
Q ss_pred chhHHHHHHHHHHHhCC----CCEEEe-CccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC---------
Q 046230 145 LMVHNELEECVARFVGK----PAAIVF-GMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA--------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~----~~~i~~-~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (489)
++...+|.++|++.++. ...+++ +||++|+..+++. .+++..+|.....+|+.+...+.+++.
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 160 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGM 160 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCC
Confidence 67778999999998863 244555 7999999655554 456667778888999988777666541
Q ss_pred ---eEEEecCCC-------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 046230 208 ---TIRVFQHNT-------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 208 ---~~~~~~~~d-------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~ 267 (489)
.+..++.++ .+.+.+.+++.+.... ..+.+.++||+|++++..|.+.+ +++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~ 237 (442)
T TIGR00709 161 LMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVE---SGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTR 237 (442)
T ss_pred CCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhc---cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 122222221 1222233333221100 01246899999999998887743 999999999
Q ss_pred HcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCC
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSI 343 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~ 343 (489)
+||+++|+||+++ +|||+|.+ ..+++++.| ||+ +++|++|+ | |+++++++ ++.+....+..+|+ +
T Consensus 238 ~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~~T~~--g 306 (442)
T TIGR00709 238 KHDIKLILDEVQA--GFGRSGTMFAFEHAGIEP---DFV--VMSKAVGG-GLPLAVLLIAPE-FDAWQPAGHTGTFR--G 306 (442)
T ss_pred HcCCEEEEecccc--CCCCCCchhHHHHcCCCC---cEE--EEcccccC-CcccEEEEEchH-HhccCCCcCCCCCC--c
Confidence 9999999999999 99999987 778899999 999 89999988 7 88888888 46554333444444 9
Q ss_pred CHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCC----------
Q 046230 344 SPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPA---------- 409 (489)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~---------- 409 (489)
||+.|++++++|+++ ..+++.+++++++++|++.|+++ .++++. ...+.++.+.+..+.
T Consensus 307 npla~aaa~a~L~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~ 379 (442)
T TIGR00709 307 NQLAMVTGTEALNYW-------KDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYP 379 (442)
T ss_pred CHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCC
Confidence 999999999999998 45678899999999999999875 333332 334666777664321
Q ss_pred ----cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 ----KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ----~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+...|+++||++.+.+ ...+.+||.||+.+|++|+++++++++++++++
T Consensus 380 ~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 380 RDCELAAAIQGACFENGLLLETGG-----REGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred cchHHHHHHHHHHHHCCeEEeecC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 24568888999999987421 234789999999999999999999999998765
No 83
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-39 Score=329.31 Aligned_cols=352 Identities=17% Similarity=0.166 Sum_probs=269.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++|||| ++.+...++|+||++.+|+.+|+.+....... ...
T Consensus 22 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~ 82 (443)
T PRK08360 22 YYPLVPVKAENAKVWDIE---------------GNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI----YGF 82 (443)
T ss_pred cCCceEEecceeEEEECC---------------CCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc----ccC
Confidence 446778999999999999 9999999 44577889999999999999999985443211 123
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCe-----------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (489)
++...++.++|++.++. +.+++.+||++|+..+++. .+++..+|.....+|+.+......++..
T Consensus 83 ~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 162 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELS 162 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCC
Confidence 66778999999999865 3566669999999555543 4566667778888999876655544411
Q ss_pred -EEEecCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHH
Q 046230 209 -IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAIC 266 (489)
Q Consensus 209 -~~~~~~~d-----------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~ 266 (489)
+..++.++ .+.++++++... .+.+.++|++||+++++|.+.+ +++|.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~ 234 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV--------YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKIL 234 (443)
T ss_pred CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc--------CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 12222221 233444443210 1247899999999999997755 89999999
Q ss_pred HHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccC
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATS 342 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~ 342 (489)
++||++||+||+|+ +||++|++ .++++++.| |++ |+||++|+ | |++++++++++.+....+.+ +.+
T Consensus 235 ~~~g~llI~DEv~~--g~gr~G~~~a~~~~~~~p---Dii--tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~~--T~~ 304 (443)
T PRK08360 235 DEHGILLVVDEVQS--GLGRTGKWFAIEHFGVEP---DII--TLGKPLGG-GLPISATIGRAEIMDSLPPLAHAF--TLS 304 (443)
T ss_pred HHcCCEEEEecccc--CCCcCccchhhhhcCCCC---CEE--EecccccC-CceeEEEEEcHHHHhhhcCCCCCC--CCC
Confidence 99999999999999 89999987 567789988 888 99999985 6 99999999999887544443 445
Q ss_pred CCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCC--CCCCeEEEEeCCC--------Cc
Q 046230 343 ISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGD--NDSPVMPIMLYNP--------AK 410 (489)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~--~~~~~~~~~~~~~--------~~ 410 (489)
++|+.+++++++|+.+ ..++++++++++++++++.|+++ .++++.+ ..+.++.+.+..+ ..
T Consensus 305 ~~p~~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~ 377 (443)
T PRK08360 305 GNPVASAAALAVIEEI-------EEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEE 377 (443)
T ss_pred cCHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHH
Confidence 9999999999999998 44568999999999999999876 3333322 3455666665422 12
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+..+.+.|+++|+++.+. ..+++||+||+.+|++|||+++++|+++++.+.
T Consensus 378 ~~~~~~~l~~~Gi~~~~~-------~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 378 AAKVVWRAWELGLIVTFF-------SGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred HHHHHHHHHHCCeEEeec-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457889999999998732 247899999999999999999999999998863
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=4.4e-39 Score=330.66 Aligned_cols=347 Identities=19% Similarity=0.214 Sum_probs=274.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++.++.+++|.++||.| |+++|||++ +++++++++||.+.+++.+++.+...... ..+.
T Consensus 17 ~~~~~~~~~~g~~~~d~d---------------G~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~ 77 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVD---------------GNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL----GFFY 77 (413)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC----cccC
Confidence 467889999999999999 999999976 67888888899999999999976432111 1135
Q ss_pred chhHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcCC------------
Q 046230 145 LMVHNELEECVARFVG--KPAAIVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARGSGA------------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g~------------ 207 (489)
++.+.+++++++++++ .+..+++++|++++..+++.+ .++.++|+.+..+|++....+..++.
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLP 157 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 7889999999999998 567777799999997777765 34555666677788877776665543
Q ss_pred eEEEecCC-----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcE
Q 046230 208 TIRVFQHN-----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAY 272 (489)
Q Consensus 208 ~~~~~~~~-----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~ 272 (489)
.+..++++ |+++|++.++.+ +++.++|+++++++++|.+.+ +++|+++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (413)
T cd00610 158 GVLHVPYPYRYRPPAELADDLEALEEALEEH----------PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGIL 227 (413)
T ss_pred CcEEeCCCccccchhhHHHHHHHHHHHHhcC----------CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 35678887 788888887652 236778999999999999877 99999999999999
Q ss_pred EEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHH
Q 046230 273 IYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAA 348 (489)
Q Consensus 273 li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 348 (489)
+|+||+|+ ++|++|.+ ..+++++.| |++ |+||++++ | |++++++++++.+......+..+.+.+|+.+
T Consensus 228 li~Dev~~--g~g~~g~~~~~~~~~~~~---d~~--t~sK~l~~-g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 299 (413)
T cd00610 228 LIADEVQT--GFGRTGKMFAFEHFGVEP---DIV--TLGKGLGG-GLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLAC 299 (413)
T ss_pred EEEecccc--CCCcCcchhhHhhcCCCC---CeE--EEcccccC-ccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHH
Confidence 99999999 78888876 567788877 887 99999987 5 8899999999986211222223345899999
Q ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeeeCCCCCCeEEEEeCCC--------CcHHHHHH
Q 046230 349 EQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNP--------AKIPAFSR 416 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~--------~~~~~~~~ 416 (489)
+++.++|+.+. .++..++++++++++++.|+++. ........++++++.+... .....+++
T Consensus 300 ~a~~a~l~~l~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (413)
T cd00610 300 AAALAVLEVLE-------EEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIK 372 (413)
T ss_pred HHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHH
Confidence 99999999983 35678899999999999998762 2222234577888887654 34668999
Q ss_pred HHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 417 ECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 417 ~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.|+++||.+.+.+ .+.+|++++..+|++|+++++++|+++
T Consensus 373 ~l~~~gv~v~~~~-------~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 373 AALERGLLLRPSG-------GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred HHHHCCeEEeecC-------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 9999999998532 478999999999999999999999875
No 85
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2e-39 Score=332.59 Aligned_cols=353 Identities=15% Similarity=0.151 Sum_probs=262.3
Q ss_pred hhcccCCC--ccCCCCCeEEEe-eccccCCcccccccCccceeEec-ccccccCCCCCCccchH--HHHHHHHHhCCCCC
Q 046230 63 IQDCFGRP--ISSAPDAWFDVV-ERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTP--RVIESLKKYSPSTC 136 (489)
Q Consensus 63 ~~~~~~~~--i~~~~G~~i~~~-dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~--a~~~~l~~~~~~~~ 136 (489)
+.+.+|.+ +.+++|+|+||+ | |++|||| ++.+...++|+||+|.+ ++.+|+.+......
T Consensus 20 ~~~~~p~~~~i~~a~G~~l~D~~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~ 84 (443)
T PRK08297 20 LVDGFDLVLDLERSQGSYLVDART---------------GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKP 84 (443)
T ss_pred hhcCCCcceEEEeccCCEEEECCC---------------CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhcc
Confidence 44567766 689999999996 9 9999999 55577888988999999 99999987542111
Q ss_pred CcccCCCcchhHHHHHHHHHHHh-C--CCCEEEeCccHHHHHHhHhhhc----------C-----CCCEEEEcCCCchHH
Q 046230 137 SSRVDGGTLMVHNELEECVARFV-G--KPAAIVFGMGYVTNSAILPVLM----------R-----KGSLIISDSLNHNSI 198 (489)
Q Consensus 137 ~~~~~~g~~~~~~~l~~~la~~~-g--~~~~i~~~sG~~a~~~~~~al~----------~-----~g~~Vl~~~~~h~~~ 198 (489)
... .-.++...++.++|+++. + .+.+++.+||++|+..+++... + +..+|.+...+|+.+
T Consensus 85 ~~~--~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t 162 (443)
T PRK08297 85 SNS--DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRS 162 (443)
T ss_pred ccC--CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcc
Confidence 110 113566788999999887 2 3466677999999976666541 2 234667788889888
Q ss_pred HHHHHhcCCeE------------------EEecCC-------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 199 VNGARGSGATI------------------RVFQHN-------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 199 ~~~~~~~g~~~------------------~~~~~~-------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
...+..++... ..++.. +++++++++.+. +.+.++||+|
T Consensus 163 ~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----------~~~iAavI~E 232 (443)
T PRK08297 163 GYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH----------PHDIACFIAE 232 (443)
T ss_pred hhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC----------CCcEEEEEEc
Confidence 77776654210 001110 123334444431 3578999999
Q ss_pred CcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcceEEEe
Q 046230 248 GIYSMEGELC----KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCGGYIAG 322 (489)
Q Consensus 248 ~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~ 322 (489)
|++++.|.+. +|++|+++|++||++||+|||++ +|||+|++ .++++|+.| ||+ +|+|+++. ||++++
T Consensus 233 Pi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~~-~a~l~~ 304 (443)
T PRK08297 233 PIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT--GVGLTGTAWAYQQLGVRP---DIV--AFGKKTQV-CGIMAG 304 (443)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--ccCccchHHHHHhcCCCC---CEE--Eecccccc-cceecc
Confidence 9999999874 39999999999999999999999 99999987 788999999 999 99999965 676666
Q ss_pred CHHHHHHHH-----hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee---
Q 046230 323 SKELIQYLK-----YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEV--- 392 (489)
Q Consensus 323 ~~~~~~~l~-----~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v--- 392 (489)
++ +.+... ...+..+| ++||+.|++++++|+++ ..+++++++++++++++++|+++ .++.
T Consensus 305 ~~-i~~~~~~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~ 374 (443)
T PRK08297 305 RR-VDEVEDNVFAVSSRINSTW--GGNLVDMVRARRILEVI-------EEDGLVENAARQGEYLLARLEELAAEFPAVVS 374 (443)
T ss_pred hH-HHHhhhhhccCccccCCCC--CccHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHHCCCcce
Confidence 53 332221 11133333 49999999999999999 45678999999999999999876 2321
Q ss_pred eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 393 LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....+.++.+.+.+......+.+.|+++||++.+ .+.+.+||+|++.+|++|||+++++|+++++++
T Consensus 375 ~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~-------~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 375 NVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLP-------CGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred eeeccceEEEEEecCHHHHHHHHHHHHHCCEEEec-------CCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 11234777788876554566899999999999973 234679999999999999999999999998764
No 86
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=5.5e-39 Score=328.37 Aligned_cols=349 Identities=14% Similarity=0.145 Sum_probs=269.1
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..+++++|+|+||+| |++|||| ++.+...++|+||++.+|+.++++++...... ...++
T Consensus 23 ~~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~~ 83 (421)
T PRK09792 23 NFFAQSAENATLKDVE---------------GNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQ----IVPYE 83 (421)
T ss_pred CeeEEeccccEEEeCC---------------CCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccC----ccCCH
Confidence 5678999999999999 9999999 55577888988999999999999986433211 12366
Q ss_pred hHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCe------------
Q 046230 147 VHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGAT------------ 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~------------ 208 (489)
...++.++|++..+. +..++++||++|+..+++. .+++..+|.....+|+.+...+..++..
T Consensus 84 ~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~ 163 (421)
T PRK09792 84 SYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPG 163 (421)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCC
Confidence 778999999998752 4677779999999555554 3466667778888999876666554321
Q ss_pred -EEEecC----------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC-C---hHHHHHHHHHcCcEE
Q 046230 209 -IRVFQH----------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC-K---FPEIIAICKKYKAYI 273 (489)
Q Consensus 209 -~~~~~~----------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~-~---l~~i~~l~~~~~~~l 273 (489)
+..++. ++++.+++.+++.. .+.+.++|++||+++++|... | +++|+++|++||++|
T Consensus 164 ~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~--------~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~ll 235 (421)
T PRK09792 164 SVYHVPYPSDLHGISTQDSLDAIERLFKSDI--------EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVM 235 (421)
T ss_pred CcEEcCCCcccccccHHHHHHHHHHHHHhcc--------CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 122222 13466776665310 024688999999999999654 4 999999999999999
Q ss_pred EEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHH
Q 046230 274 YLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAE 349 (489)
Q Consensus 274 i~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~a 349 (489)
|+||+++ +||++|++ ..+++++.| ||+ ||||++++ | |++++++++++.+....+..+|+ .||+.|+
T Consensus 236 I~DEv~t--g~gr~G~~~a~~~~~~~p---Di~--t~gK~l~~-G~pigav~~~~~i~~~~~~~~~~~T~~--gnpl~~a 305 (421)
T PRK09792 236 IADEVQS--GFARTGKLFAMDHYADKP---DLM--TMAKSLAG-GMPLSGVVGNANIMDAPAPGGLGGTYA--GNPLAVA 305 (421)
T ss_pred EEecccc--CCCCCCchhHHHhcCCCC---cEE--EeehhhcC-CCceEEEEEcHHHHhccCCCCcCCCCC--CCHHHHH
Confidence 9999999 99999987 667888888 887 99999986 6 99999999999887655555555 9999999
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee--eCCCCCCeEEEEeCCC-------CcHHHHHHHH
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEV--LGDNDSPVMPIMLYNP-------AKIPAFSREC 418 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v--~~~~~~~~~~~~~~~~-------~~~~~~~~~l 418 (489)
+++++|+++ +.++.+++++++++++++.|+++ .++. .....+.++++.+..+ .....+.+.|
T Consensus 306 aa~a~l~~l-------~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~ 378 (421)
T PRK09792 306 AAHAVLNII-------DKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA 378 (421)
T ss_pred HHHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHH
Confidence 999999999 44578889999999999998875 2332 2223377888887643 2356788999
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+++||++.+. ....+.+||.||+.+|++|+++++++|+++++
T Consensus 379 ~~~Gv~i~~~-----g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 379 LAQGLLLLTC-----GAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HHCCcEEeec-----CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 9999998521 12248899999999999999999999999874
No 87
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=325.97 Aligned_cols=350 Identities=16% Similarity=0.180 Sum_probs=266.3
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
+|..+++++|+|+||.| |++||||. +.+...++|+||++.+|+.++++++...... ...+
T Consensus 22 ~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~ 82 (421)
T PRK06777 22 CDFYAERAENATLWDVE---------------GREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQ----IVPY 82 (421)
T ss_pred CCeeEEeeecCEEEeCC---------------CCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccc----ccCC
Confidence 36778999999999999 99999994 4566788988999999999999986432211 1235
Q ss_pred hhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCe-----------
Q 046230 146 MVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (489)
+...++.++|++..+. +..++++||++|+..+++. .+++..+|.....+|+.+...+.+++..
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~ 162 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFP 162 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 6678899999998763 4677779999999655553 4566677888889999887766554421
Q ss_pred --EEEecCC----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC-CC---hHHHHHHHHHcCcE
Q 046230 209 --IRVFQHN----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL-CK---FPEIIAICKKYKAY 272 (489)
Q Consensus 209 --~~~~~~~----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~-~~---l~~i~~l~~~~~~~ 272 (489)
+..++.+ +++++++.+++.. .+.+.++|++||++++.|.. .+ +++|+++|++||++
T Consensus 163 ~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~--------~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~l 234 (421)
T PRK06777 163 GSIFHALYPNELHGVSVEEALSSVERLFKADI--------APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGIL 234 (421)
T ss_pred CCcEEcCCCccccCcCHHHHHHHHHHHHHhcc--------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1111222 2455666664310 12578999999999998864 33 99999999999999
Q ss_pred EEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHH
Q 046230 273 IYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAA 348 (489)
Q Consensus 273 li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 348 (489)
||+||+|+ +||++|.+ ..+++++.| ||+ |+||++++ | |++++++++++.+....+..+|+ +||+.|
T Consensus 235 lI~DEv~t--g~gr~g~~~~~~~~~~~p---Div--~~sK~l~~-G~pigav~~~~~i~~~~~~~~~~~T~~--~~p~~~ 304 (421)
T PRK06777 235 LIADEVQT--GFARTGKLFAMEYYDVKP---DLI--TMAKSLGG-GMPISAVVGRAEVMDAPAPGGLGGTYA--GNPLAV 304 (421)
T ss_pred EEEechhh--CCccCCchhhhhhcCCCC---CEE--eeehhhcC-CCceEEEEEcHHHHhccCCCCCCCCCC--cCHHHH
Confidence 99999999 89999987 667889888 988 99999985 7 99999999999887655555555 999999
Q ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------cHHHHHHH
Q 046230 349 EQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------KIPAFSRE 417 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~ 417 (489)
++++++|+.+ ..+++++++++++++++++|+++ +........+.++.+.+..+. ....+.+.
T Consensus 305 aaa~a~L~~~-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~ 377 (421)
T PRK06777 305 AAALAVLDVI-------AEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQ 377 (421)
T ss_pred HHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHH
Confidence 9999999998 44678999999999999999886 222222334555555453321 13456677
Q ss_pred HhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 418 CLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 418 l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
|+++||++.+.+ ...+++||+||+.+|++++++++++|++++.
T Consensus 378 ~~~~Gv~i~~~~-----~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 378 ALEEGLLLLSCG-----VHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHhCCeEEeecC-----CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 889999998532 1136899999999999999999999998863
No 88
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=9.8e-40 Score=333.31 Aligned_cols=343 Identities=16% Similarity=0.155 Sum_probs=254.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHH--HHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIES--LKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~--l~~~~~~~~~~~~~~ 142 (489)
.+|..+.+++|+|+||+| |++||||. +.+...++|+||.+++|+.++ ...+.... .
T Consensus 39 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~-~----- 97 (464)
T TIGR00699 39 HFLADYEKSRGNYLVDVD---------------GNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP-A----- 97 (464)
T ss_pred ccceEEEecccCEEEeCC---------------CCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc-c-----
Confidence 556778999999999999 99999995 457888999999999999985 33332211 1
Q ss_pred CcchhHHHHHHHHHH----HhCC--CCEEEeCccHHHHHHhHhhhc---C---------------------------CCC
Q 046230 143 GTLMVHNELEECVAR----FVGK--PAAIVFGMGYVTNSAILPVLM---R---------------------------KGS 186 (489)
Q Consensus 143 g~~~~~~~l~~~la~----~~g~--~~~i~~~sG~~a~~~~~~al~---~---------------------------~g~ 186 (489)
-.++...+++++|++ .++. +.+++.+||++||..+++... + +.+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 124455667777654 5542 456666999999976666541 0 114
Q ss_pred EEEEcCCCchHHHHHHHhcCCeE-----------EEecC-------------------CCHHHHHHHHHHHHhcCCCCCC
Q 046230 187 LIISDSLNHNSIVNGARGSGATI-----------RVFQH-------------------NTPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~~-----------~~~~~-------------------~d~~~Le~~l~~~~~~g~~~~~ 236 (489)
+|.+...+|+.+...+..++... ..++. +++++|++++++.
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~--------- 248 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW--------- 248 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---------
Confidence 67788888998877776654210 00111 1244566666432
Q ss_pred CCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCC--CCCccEEEccc
Q 046230 237 RPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVD--TADVDIMMGTF 309 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~--p~~~Di~~~t~ 309 (489)
+...++||+||++++.|.+.+ |++|+++|++||++||+|||++ +||++|.+ +++++|+. | ||+ |+
T Consensus 249 -~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t--GfGrtG~~fa~e~~gv~~~P---Di~--t~ 320 (464)
T TIGR00699 249 -HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT--GVGATGKFWAHEHWNLDDPP---DMV--TF 320 (464)
T ss_pred -CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee--CCCCCcchhHHHhcCCCCCC---CEE--Ee
Confidence 246899999999999998877 9999999999999999999999 99999998 88999997 7 998 99
Q ss_pred ccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 046230 310 TKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM- 388 (489)
Q Consensus 310 sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (489)
+|++|+ ||++++++. ++......+..+| .+||++|++++++|+++ +.+++.+++++++++|++.|+++
T Consensus 321 gK~lg~-gG~~~~~~~-~~~~~~~~~~~T~--~gnp~~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~ 389 (464)
T TIGR00699 321 SKKFQT-AGYFFHDPA-FRPNKPYRQFNTW--MGDPSRALILREIIQEI-------KRKDLLENVAHVGDYLYTGLEDLQ 389 (464)
T ss_pred hhhhcc-CCccccchh-ccCCCCcccccCC--CCCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999975 566555432 1111111233344 49999999999999999 55789999999999999999886
Q ss_pred -CCe-eeCC----CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 389 -GFE-VLGD----NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 389 -g~~-v~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.++ ++.+ ..+.++++.+.+......+.+.|+++|+++.+ .+.+++||.||+.+|++|||+++++|++
T Consensus 390 ~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~-------~g~~~ir~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 390 KKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGG-------CGVKAIRLRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred HhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEec-------CCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 244 2222 45778888775544467899999999999973 2447899999999999999999999987
Q ss_pred HH
Q 046230 463 VG 464 (489)
Q Consensus 463 ~~ 464 (489)
++
T Consensus 463 ~~ 464 (464)
T TIGR00699 463 II 464 (464)
T ss_pred hC
Confidence 63
No 89
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=7e-39 Score=319.41 Aligned_cols=332 Identities=16% Similarity=0.156 Sum_probs=255.9
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+..+.+++|+|+||.| |++||||. +.+...++|+||++++|+.+|+++...... . -.+
T Consensus 6 ~~~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~---~~~ 65 (364)
T PRK04013 6 KRLRLVRGEGIYVWDSQ---------------GRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP--M---FEH 65 (364)
T ss_pred CCccEEEeecCEEEECC---------------CCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC--C---cCC
Confidence 36778999999999999 99999994 457788888899999999999998643321 1 136
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcC------------CeEE
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARGSG------------ATIR 210 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g------------~~~~ 210 (489)
+...+++++++++.+.+.+++.+||++|+..+++.. .++..+|..+..+|+.+...+..++ ..+.
T Consensus 66 ~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~ 145 (364)
T PRK04013 66 EEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK 145 (364)
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcE
Confidence 777899999999988888888899999996666654 3445567777788887655554322 1244
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
.++.+|.+++++.+.+ +.++|++|++++..|...+ +++|+++|++||+++|+||+++ ++ |
T Consensus 146 ~~~~~d~~~l~~~i~~-------------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t--G~-R 209 (364)
T PRK04013 146 HIPFNDVEAAKEAITK-------------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS--GL-R 209 (364)
T ss_pred EecCCCHHHHHHHhcC-------------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--cC-C
Confidence 5677888888887742 6789999999998887643 9999999999999999999999 88 9
Q ss_pred CCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 287 TGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 287 ~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
+|.+ ..+++++.| ||+ +++|++|+ | |+++.++++ ....+.++|+ +||+.|++++++|+++
T Consensus 210 tG~~~a~~~~gv~P---Div--~~gK~lgg-G~P~~a~~~~~~~----~~~~~~~T~~--gnp~~~aaa~a~l~~i---- 273 (364)
T PRK04013 210 TGKFLAIEHYKVEP---DIV--TMGKGIGN-GVPVSLTLTNFDV----ERGKHGSTFG--GNPLACKAVAVTLRIL---- 273 (364)
T ss_pred CCchhHHHhcCCCC---CEE--EecccccC-CceeEEEEecccc----cCCCcCCCCC--cCHHHHHHHHHHHHHH----
Confidence 9987 778999999 999 99999987 6 777777665 2223444444 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEE
Q 046230 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARI 442 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi 442 (489)
+.+++.+++++. +. .|.. .+.......+.++.+.+..+ ...+.+.|+++|+++.+ .+.+.+||
T Consensus 274 ---~~~~l~~~~~~~---l~-~l~~-~~v~~vRG~Gl~~gve~~~~--~~~i~~~~~~~Gll~~~-------~g~~vlr~ 336 (364)
T PRK04013 274 ---RRERLVEKAGEK---FI-EIKG-ERVVTTRGRGLMIGIVLKKP--VGKYVEELQNRGYLVHT-------AGQRVIRL 336 (364)
T ss_pred ---HhccHHHHHHHH---HH-Hhcc-CcceeeeeCcEEEEEEeCCc--HHHHHHHHHhCCcEEee-------CCCCEEEE
Confidence 456677777654 22 2221 22111223356666666433 56789999999999873 23478999
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 443 CISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 443 ~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.||+.+|++|+++++++|+++++++
T Consensus 337 ~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 337 LPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 90
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=354.52 Aligned_cols=350 Identities=15% Similarity=0.142 Sum_probs=273.0
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
.+..+.+++|.|++|.| |++||||.+ ++.+++|+||+|.+|+.+|+.+....+ +. .++
T Consensus 567 ~p~~i~~g~G~~l~D~d---------------G~~ylD~~~-~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~---~~~ 624 (972)
T PRK06149 567 DPPQIERGWRHHLFDMA---------------GRSYLDMVN-NVTVLGHGHPRLAAAAARQWSLLNTNS---RF---HYA 624 (972)
T ss_pred CCCeEEEeeeeEEEeCC---------------CCEEEECCC-CccccCCCCHHHHHHHHHHHHhccccc---cc---cCH
Confidence 35678999999999999 999999975 467899889999999999999854322 11 356
Q ss_pred hHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHhcCC-----e--------
Q 046230 147 VHNELEECVARFVG--KPAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARGSGA-----T-------- 208 (489)
Q Consensus 147 ~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~~g~-----~-------- 208 (489)
.+.+++++|+++++ .+.+++++||++||..+++ +.+++.++|.++..+|+.+.....+++. .
T Consensus 625 ~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~ 704 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDW 704 (972)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCC
Confidence 78899999999985 4677788999999966665 5678888999999999877655433221 0
Q ss_pred EEE----------ecCCC-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 046230 209 IRV----------FQHNT-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKY 269 (489)
Q Consensus 209 ~~~----------~~~~d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~ 269 (489)
+.. +++++ .+++++.++..... +.+.++||+|+++++.|.+.+ |++|+++|++|
T Consensus 705 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 705 VHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDAS-------GRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred eEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhc-------CCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 111 11222 34556656543221 257899999999999999877 99999999999
Q ss_pred CcEEEEEcccccccccCCCC-c-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCC
Q 046230 270 KAYIYLDEAHSIGAVGKTGR-G-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSIS 344 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~-~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~ 344 (489)
|+++|+||||+ +|||+|. + .++++|+.| ||+ |++|++|+ | |++++++++++.+.... .+..++++|
T Consensus 778 g~llI~DEV~t--GfGRtG~~~~a~e~~gv~P---Div--t~gK~lg~-G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gn 848 (972)
T PRK06149 778 GGVCIADEVQV--GYGRLGHYFWGFEQQGVVP---DII--TMAKGMGN-GHPLGAVITRREIAEALEAEG-YFFSSTGGS 848 (972)
T ss_pred CCEEEEEeehh--cCCccCccchhhhhcCCCC---CEE--EecccccC-CeeeEEEEEcHHHHhhhccCC-cccCCCCCC
Confidence 99999999999 9999997 3 778999999 999 99999987 6 99999999999886422 122234699
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCC--------CcHH
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNP--------AKIP 412 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~--------~~~~ 412 (489)
|+.|++++++|+++ +.+++.+++++++++|+++|+++ ..++++ ...+.++.+.+... ....
T Consensus 849 P~~~aaala~L~~i-------~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~ 921 (972)
T PRK06149 849 PVSCRIGMAVLDVL-------REEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETA 921 (972)
T ss_pred HHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHH
Confidence 99999999999999 55679999999999999999886 233333 23466667766321 1245
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+++.|+++||++.+.+ ...+.+||.|++++|++|+|+++++|++++++
T Consensus 922 ~i~~~l~~~Gvl~~~~g-----~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 922 AICDRLLELGVIMQPTG-----DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHhCCeEEeecC-----CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 78999999999998422 22478999999999999999999999999864
No 91
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3.9e-38 Score=322.71 Aligned_cols=351 Identities=13% Similarity=0.154 Sum_probs=266.0
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.||..+++++|+|+||.| |++|||| ++.+...++|+||++.+|+.+|+++....... ...
T Consensus 14 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~----~~~ 74 (420)
T TIGR00700 14 TLPVFAARAEGAILEDVD---------------GNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM----VTP 74 (420)
T ss_pred CCCeeEEeeeeeEEEeCC---------------CCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc----ccC
Confidence 567788999999999999 9999999 45577889999999999999999986432211 123
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC-----------
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA----------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (489)
++...++.++|++.++. +..++.+||++|+..+++. .+++..+|.....+|+.+...+.+++.
T Consensus 75 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 154 (420)
T TIGR00700 75 YEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPF 154 (420)
T ss_pred ChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCC
Confidence 45668899999998753 4566679999999555543 456777888888999987766655431
Q ss_pred --eEEEecCC----------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHH
Q 046230 208 --TIRVFQHN----------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAI 265 (489)
Q Consensus 208 --~~~~~~~~----------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l 265 (489)
.+..++.. +++.+++.+... . .+...++||+||+++.+|.+.+ +++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~l 226 (420)
T TIGR00700 155 APEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID--V------GANNVAALVIEPVQGEGGFIVPAKGFVPALLDW 226 (420)
T ss_pred CCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh--c------CCCcEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 01112221 134455554311 0 1257899999999999998766 9999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccccc
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYAT 341 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~ 341 (489)
|++||++||+||+++ +||++|.+ ..+++++.| ||+ ||||++++ | |++++++++++.+....+..+++
T Consensus 227 c~~~gillI~DEV~t--g~gr~g~~~a~~~~~~~p---Di~--~lsK~l~~-G~pig~v~~~~~i~~~~~~~~~~~T~~- 297 (420)
T TIGR00700 227 CREHGIVFIADEVQT--GFARTGAMFACEHEGPEP---DLI--TTAKSLAD-GLPLSGVTGRAEIMDAPAPGGLGGTYA- 297 (420)
T ss_pred HHHcCCEEEEEeccc--CCcccchhHHHhhcCCCC---CEE--EeeccccC-CcceEEEEecHHHHhhcCCCCcCCCCC-
Confidence 999999999999999 99999976 667888888 988 89999995 7 99999999999886555555555
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC-------Cc
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP-------AK 410 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~-------~~ 410 (489)
.||+.|++++++|+++ ..++..+++++.++++++.|+++ +........+.++++.+..+ ..
T Consensus 298 -~~pl~~aaa~a~l~~l-------~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~ 369 (420)
T TIGR00700 298 -GNPLACAAALAVLAII-------ESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGL 369 (420)
T ss_pred -cCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHH
Confidence 9999999999999998 44668888888899999988875 22222223466777766322 12
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
...+.+.|+++||.+.+.+. ..+++||+|+..+|+++|++++++|+++++
T Consensus 370 ~~~l~~~~~~~Gv~i~p~~~-----f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 370 AERIATAAHAAGLLLLTCGM-----FGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHCCeEEeccCC-----CCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 45677888899999985321 137899999999999999999999998874
No 92
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=4.1e-38 Score=323.08 Aligned_cols=343 Identities=16% Similarity=0.136 Sum_probs=261.6
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+++|..+.+++|+|+||+| |++|||| ++++...++|+||.+.+|+.+++++... .. .
T Consensus 55 ~~~p~~~~~a~G~~v~D~D---------------G~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~-~~------~ 112 (453)
T PRK07046 55 TPFPLFVAEARGARFTDVD---------------GHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT-TM------L 112 (453)
T ss_pred CCCCCeEEeeeeCEEEeCC---------------CCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC-CC------C
Confidence 3678889999999999999 9999999 5567788999999999999999997322 11 2
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHh--c----------C--
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARG--S----------G-- 206 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~--~----------g-- 206 (489)
.++...++.++|++.++.+...+.+||++|+..+++ +.+++..+|.+...+|+.....+.. . |
T Consensus 113 ~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~ 192 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQV 192 (453)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCC
Confidence 467778999999999887788888999999955554 4557766777788888863221110 0 1
Q ss_pred ----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 046230 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa 278 (489)
..+..+++||++++++.+.. .+.++||+||++++.|.+.| |++|+++|+|||++||+|||
T Consensus 193 ~~~~~~~~~~~~nd~~~l~~~l~~------------~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV 260 (453)
T PRK07046 193 HDLTATTRVVEFNDLAALEAALAD------------GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDET 260 (453)
T ss_pred ccccCceEeeCCCCHHHHHHHhCC------------CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 12456788999999988842 47899999999999898865 89999999999999999999
Q ss_pred cccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC------C-CcccccCCCHHHH
Q 046230 279 HSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC------P-AHLYATSISPPAA 348 (489)
Q Consensus 279 ~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~------~-~~~~~~~~~p~~~ 348 (489)
+++ .+|..| ..+++|+.| ||+ ||+|++|+ | |++++++++++.+.... . .+..+.++||+.|
T Consensus 261 ~tf-r~g~Gg--~~~~~gv~P---Di~--t~gK~lgg-G~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~ 331 (453)
T PRK07046 261 HTI-SSGPGG--YTRAHGLEP---DFL--VVGKPIAG-GVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAM 331 (453)
T ss_pred ccC-ccCCcc--hhHHhCCCc---cce--eehhhhcC-CCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHH
Confidence 982 233332 456789999 999 99999987 6 88999999999886321 1 1122335999999
Q ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC--------------Cc
Q 046230 349 EQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP--------------AK 410 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~--------------~~ 410 (489)
++++++|+++ ..++..+++++++++|+++|+++ +++......+.++.+.+... ..
T Consensus 332 aa~~a~L~~l-------~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 404 (453)
T PRK07046 332 AAMRATLAEV-------MTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPEL 404 (453)
T ss_pred HHHHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHH
Confidence 9999999998 44567999999999999999864 54432222344555554221 11
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...+...|+++||++.+ . .+.++++| .||++|||+++++++++++++
T Consensus 405 ~~~~~~~~~~~Gv~~~~-------~-~~~~~~~p--~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 405 EAALHLYLLNRGVLITP-------F-HNMMLVCP--ATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHHCCCEEec-------c-cCcEEEeC--CCCHHHHHHHHHHHHHHHHHH
Confidence 34677889999999873 1 24578887 499999999999999998765
No 93
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=6.9e-38 Score=320.31 Aligned_cols=344 Identities=15% Similarity=0.147 Sum_probs=262.3
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
.++++++|+|+||.| |++||||+++ +...++|+||++++++.+++++++...... -+++.
T Consensus 29 ~~~~~a~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~----~~~~~ 89 (427)
T TIGR00508 29 YPVESADGVELTLDD---------------GRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGG----FTHKP 89 (427)
T ss_pred ceEEeeeeeEEEeCC---------------CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc----cCCHH
Confidence 457899999999999 9999999654 455667779999999999999866433211 13566
Q ss_pred HHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe--------
Q 046230 148 HNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (489)
Q Consensus 148 ~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (489)
..++.++|++.++. +.+++.+||++|+..+++... ++..+|.+...+|+.+.....+++..
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 78899999998865 456667999999966655432 24457778888888766555443321
Q ss_pred -------EEEec---------CCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC-CC----CChHHHHHHHH
Q 046230 209 -------IRVFQ---------HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG-EL----CKFPEIIAICK 267 (489)
Q Consensus 209 -------~~~~~---------~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G-~~----~~l~~i~~l~~ 267 (489)
..+++ ++|++++++++.+. +.+.++|++||++++.| .. .+|++|+++|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~----------~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~ 239 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELH----------SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCK 239 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhc----------CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHH
Confidence 11111 12456777777542 14678999999855554 33 55999999999
Q ss_pred HcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhC-----CCc
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTC-----PAH 337 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~-----~~~ 337 (489)
+||+++|+||+|+ ++|++|++ ..+++++.| ||+ +++|++++ | +++++++++++.+.... +..
T Consensus 240 ~~~~llI~DEv~t--G~Gr~G~~~~~~~~~v~p---Di~--~~gK~l~g-G~~p~~a~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 240 QYDILLIADEIAT--GFGRTGKLFACEHAGVVP---DIL--CVGKALTG-GYMTLSATVTTDKVAQTISSGEAGCFMHGP 311 (427)
T ss_pred HcCCEEEEecccc--CCCcCCccchhhhcCCCC---CEE--Eechhhhc-CcccceEEEEcHHHHHHHhcCCCCccccCC
Confidence 9999999999998 79999998 778899998 999 79999964 4 66788999999887532 222
Q ss_pred ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC-eeeC--CCCCCeEEEEeCCCCcHHHH
Q 046230 338 LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGF-EVLG--DNDSPVMPIMLYNPAKIPAF 414 (489)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~v~~--~~~~~~~~~~~~~~~~~~~~ 414 (489)
+| .+||+.+++++++|+++ ..++.++++++++++|++.|++++. +..+ ...++++++.+..+.....+
T Consensus 312 T~--~g~p~~~aaa~a~l~~l-------~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~ 382 (427)
T TIGR00508 312 TF--MGNPLACAVAEASLAIL-------LEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEEL 382 (427)
T ss_pred CC--CcCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHH
Confidence 33 48999999999999998 3346789999999999999998742 2122 23478888888766667789
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.++|+++||++.+. .+.+|++|++.+|++|||++++++++++++
T Consensus 383 ~~~l~~~Gv~~~~~--------~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 383 QKKFVEQGVWIRPF--------GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHCCeEEEec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999742 257999999999999999999999998854
No 94
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=347.15 Aligned_cols=351 Identities=15% Similarity=0.135 Sum_probs=271.3
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+|..+.+++|+|+||+| |++||||.++ +..+||+||+|++|+.+|+.+..... + -.+
T Consensus 605 ~~p~~i~~g~G~~l~D~d---------------G~~ylD~~~g-~~~lGH~hp~v~~Ai~~q~~~l~~~~---~---~~~ 662 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNR---------------GRAYLDCFNN-VCHVGHAHPRVVAAAARQAARLNTNT---R---YLH 662 (1013)
T ss_pred CCCceEEEeeecEEEECC---------------CCEEEEcccC-hhhcCCCCHHHHHHHHHHHhhcCCcC---C---cCC
Confidence 446678999999999999 9999999765 47888889999999999999864322 1 136
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCC------------e
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGA------------T 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~------------~ 208 (489)
+...++.++|++.++. +.+++.+||++||..+++. .+++.++|.+...+|+.+...+.+++. .
T Consensus 663 ~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~ 742 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDH 742 (1013)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCC
Confidence 7778999999998864 4566779999999555543 457777888999999987655544321 1
Q ss_pred EE--------EecCC--CH-------HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 046230 209 IR--------VFQHN--TP-------SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 209 ~~--------~~~~~--d~-------~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~ 267 (489)
+. ..+.+ +. +++++.++..... +...++||+|++++..|.+.+ |++|+++|+
T Consensus 743 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-------~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~ 815 (1013)
T PRK06148 743 VEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAK-------GRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVR 815 (1013)
T ss_pred ceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhcc-------CCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 11 11222 21 3455555431111 247899999999999998866 999999999
Q ss_pred HcCcEEEEEcccccccccCCCC-c-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC-CCccccc
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGR-G-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC-PAHLYAT 341 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~-~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~-~~~~~~~ 341 (489)
+||+++|+|||++ +|||+|. + .++++|+.| ||+ |++|++|+ | |++++++++++.+.... +..+|
T Consensus 816 ~~g~llI~DEVqt--GfGRtG~~~~a~e~~gv~P---Div--t~gK~lgg-G~Plgav~~~~ei~~~~~~g~~~~~Tf-- 885 (1013)
T PRK06148 816 AAGGVCIADEVQV--GFGRVGSHWWAFETQGVVP---DIV--TMGKPIGN-GHPMGAVVTTREIADSFDNGMEYFNTF-- 885 (1013)
T ss_pred HhCCEEEEEeccc--CCCCCCCcchhhhhcCCCc---cee--eecccccC-CcceEEEEEcHHHHhhccCCCccccCC--
Confidence 9999999999999 9999996 4 789999999 999 99999987 7 89999999999886432 33333
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeCCCC--------
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYNPA-------- 409 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~~~~-------- 409 (489)
++||+.|++++++|+++ ..+++.+++++++++|+++|+++ .+++++ ...+.++.+.+..+.
T Consensus 886 ~gnpla~aaa~a~L~~i-------~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~ 958 (1013)
T PRK06148 886 GGNPVSCAIGLAVLDII-------EDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATA 958 (1013)
T ss_pred CCCHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHH
Confidence 59999999999999999 55689999999999999999886 333322 234666677664321
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+.+.|+++||++.+.+ ...+++||.||+.+|++|||+++++|+++++++
T Consensus 959 ~~~~i~~~~~~~Gvl~~~~g-----~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 959 IARYVKNGARERGILIGTEG-----PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHhCCeEEeccC-----CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24568899999999997432 124889999999999999999999999999764
No 95
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-37 Score=315.16 Aligned_cols=333 Identities=17% Similarity=0.212 Sum_probs=258.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+++|.+++|+|+||.| |++||||.|+ +++++++ +|++.+|+.+++++++... .
T Consensus 11 ~~~~~~~~~G~~l~d~d---------------g~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~---------~ 65 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTD---------------GKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSP---------N 65 (375)
T ss_pred CCceEEEeeeCEEEeCC---------------CCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCccc---------C
Confidence 45788999999999999 9999999665 7899998 6899999999998864322 1
Q ss_pred hhHHHHHHHHHHHh-CCCC--EEEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcCCe-----------
Q 046230 146 MVHNELEECVARFV-GKPA--AIVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~-g~~~--~i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (489)
..+.++++.+++.+ +.++ .++++||+++|..+++.. .++.++|.++..+|+++...+..++..
T Consensus 66 ~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 66 LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 12245666666654 3333 456699999997666554 566667778899999888777665432
Q ss_pred -EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccc
Q 046230 209 -IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGA 283 (489)
Q Consensus 209 -~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~ 283 (489)
+...+++|++++++.+.+ +.++|++|++++++|.+.+ |+++.++|+++|+++|+||+|+ +
T Consensus 146 ~~~~~~~~dl~~l~~~l~~-------------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~--g 210 (375)
T PRK04260 146 HFSYAIFNDLNSVKALVNK-------------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT--G 210 (375)
T ss_pred CeEEeCCCCHHHHHHhcCC-------------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--C
Confidence 122357799999887742 4678999999999998755 8999999999999999999998 7
Q ss_pred ccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH
Q 046230 284 VGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVIL 359 (489)
Q Consensus 284 ~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~ 359 (489)
+|++|.+ ..+.+++.| |++ ||||++++ | |++++++++++.+.......+++ ++|+.++++.++|+.+
T Consensus 211 ~g~~g~~~~~~~~~~~p---di~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~a~l~~~- 281 (375)
T PRK04260 211 MGRTGKLYAFEHYGIEP---DIF--TLAKGLAN-GVPVGAMLAKSSLGGAFGYGSHGSTFG--GNKLSMAAASATLDIM- 281 (375)
T ss_pred CCcccchhhhHhhCCCC---CEE--EecccccC-CcceEEEEEcHHHHhhcCCCCCCCCCC--cCHHHHHHHHHHHHHH-
Confidence 9999976 556788888 877 99999986 5 99999999998886544444444 8999999999999988
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCC
Q 046230 360 GEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPL 435 (489)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~ 435 (489)
..++.+++++++++++++.|.+. +........+.++++.+ .....++.++|+++||.+.+ .
T Consensus 282 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~Gi~v~~-------~ 346 (375)
T PRK04260 282 ------LTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIET--TADLSQLVEAARDKGLIVLT-------A 346 (375)
T ss_pred ------HhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEe--cCcHHHHHHHHHhCCCEEec-------C
Confidence 44567788888888888888764 21111122566667766 33467899999999999873 2
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 436 LLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+.+.+||++++.+|++|+++++++|+++
T Consensus 347 ~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 347 GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 3478999999999999999999999875
No 96
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.7e-37 Score=318.32 Aligned_cols=344 Identities=18% Similarity=0.213 Sum_probs=263.2
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
+..+.+++|.++||.| |++||||+++ +...++++||.+++++.+++++ +... ...++
T Consensus 33 ~~~~~~a~G~~l~d~d---------------G~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~-~~~~------~~~~~ 90 (426)
T PRK00062 33 PRFIERAKGAYLYDVD---------------GNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK-GLSF------GAPTE 90 (426)
T ss_pred CeEEEeCcCCEEEeCC---------------CCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh-CCcC------CCCCH
Confidence 4678899999999999 9999999764 3355666789999999999988 3221 12356
Q ss_pred hHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhc-------------C---
Q 046230 147 VHNELEECVARFVG-KPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGS-------------G--- 206 (489)
Q Consensus 147 ~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~-------------g--- 206 (489)
...+|+++|++.++ .+++++++||++|+..+++. ..++.++|..+..+|+.+......+ +
T Consensus 91 ~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~ 170 (426)
T PRK00062 91 LEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPE 170 (426)
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCc
Confidence 67889999998763 56677779999999766665 3456667777888888753322221 1
Q ss_pred ---CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccc
Q 046230 207 ---ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 207 ---~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~ 279 (489)
.....++++|++++++.+... +.+.++|++|++++++|.+.+ +++|+++|++||+++|+||+|
T Consensus 171 ~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 240 (426)
T PRK00062 171 DFAKHTLTAPYNDLEAVEELFEEY----------GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240 (426)
T ss_pred ccccceEEcCCCCHHHHHHHHHhC----------CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 124567889999999988642 246789999999999999988 999999999999999999999
Q ss_pred ccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhhCCCcccc-cCCCHHHHHHHHHHH
Q 046230 280 SIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYTCPAHLYA-TSISPPAAEQIISAI 355 (489)
Q Consensus 280 s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~~~~~~~~-~~~~p~~~aa~~a~L 355 (489)
+ ++ ++|.+ .++++++.| |++ +|||++++ +.|++++++++++.+......+.++ .+++|+.+++++++|
T Consensus 241 ~--G~-r~g~~~~~~~~~~~p---Di~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L 312 (426)
T PRK00062 241 T--GF-RVALGGAQGYYGVTP---DLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 312 (426)
T ss_pred h--cc-ccCCccHHHHhCCCc---chH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHH
Confidence 9 77 66644 677889888 887 99999985 1288899999999986433322222 369999999999999
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHHHHH
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFSREC 418 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~l 418 (489)
+++ ..++++++++++++++++.|+++ ++.......+.++.+.+.... ....+.+.|
T Consensus 313 ~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l 385 (426)
T PRK00062 313 KLL-------KEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM 385 (426)
T ss_pred HHH-------hcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH
Confidence 998 33478899999999999998864 554433345777887775321 235799999
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++||++.+.++ +.++++ +.+|++||++++++|+++++.+
T Consensus 386 ~~~Gv~v~~~~~-------~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 386 LDEGVYLAPSQF-------EAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHCCeEeecCCc-------Cceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 999999985443 235554 6999999999999999998754
No 97
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=5.2e-37 Score=316.79 Aligned_cols=352 Identities=16% Similarity=0.201 Sum_probs=263.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.+..+.+++|+|+||+| |++|||| ++.+...+||+||.+.+|+.+|+++....... ...+
T Consensus 36 ~~~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~ 96 (451)
T PRK06918 36 IPTFAQSANGALVTDVD---------------GNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFN----VMMY 96 (451)
T ss_pred CCceEEeccccEEEeCC---------------CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccc----cccc
Confidence 35678999999999999 9999999 44567889999999999999999985432211 1136
Q ss_pred hhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCe-----------
Q 046230 146 MVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (489)
+...++.++|++.++. +.+++.+||++|+..+++. ..++..+|.....+|+.+...+.+++..
T Consensus 97 ~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~ 176 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFA 176 (451)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCC
Confidence 7778999999999864 3556669999999655554 4577778888999999887666554311
Q ss_pred --EEEecCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHH
Q 046230 209 --IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAI 265 (489)
Q Consensus 209 --~~~~~~~d-----------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l 265 (489)
+..++..+ .+.+++.+.... .+.+.++||+||+++..|.+.+ +++|+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l 248 (451)
T PRK06918 177 PEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV--------APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNI 248 (451)
T ss_pred CCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc--------CCCceEEEEECcccCCCCCccCCHHHHHHHHHH
Confidence 11122211 112333332110 1357899999999998887644 8999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccccc
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYAT 341 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~ 341 (489)
|++||++||+||+++ +||++|.. ..+.+++.| ||+ ||||++++ | |++++++++++.+....+..+++
T Consensus 249 ~~~~gillI~DEV~t--g~gr~g~~~a~~~~~v~p---Di~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~T~~- 319 (451)
T PRK06918 249 CSEHGILFVADEIQT--GFARTGKYFAIEHFDVVP---DLI--TVSKSLGA-GVPISGVIGRKEIMDESAPGELGGTYA- 319 (451)
T ss_pred HHHcCCEEEEecccc--CcCccCceehhHhcCCCC---CEE--eeehhhcC-CCccEEEEEcHHHHhccCCCCcCcCCC-
Confidence 999999999999999 99999976 567788888 888 99999995 7 99999999999886555555555
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeC--CCCCCeEEEEeC-C-----C--C
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLY-N-----P--A 409 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~--~~~~~~~~~~~~-~-----~--~ 409 (489)
+||+.++++.++|+++ ..++..+++++++++++++|+++ ++++.. ...+.++.+.+. + + .
T Consensus 320 -g~~l~~aaa~a~l~~i-------~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~ 391 (451)
T PRK06918 320 -GSPLGCAAALAVLDII-------EKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKT 391 (451)
T ss_pred -cCHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHH
Confidence 9999999999999998 44567888888899999988876 333211 123444444442 1 1 1
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
....+.+.|+++||.+.+.+. ..+++||+|+..+|+++|++++++|+++++++
T Consensus 392 ~~~~l~~~~~~~Gvlv~~~~~-----~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 392 LTANICKEANKRGLLLLSAGT-----YGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred HHHHHHHHHHHCCeEEeecCC-----CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 245678888999999985321 13789999999999999999999999999876
No 98
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=2e-37 Score=317.58 Aligned_cols=349 Identities=15% Similarity=0.177 Sum_probs=252.5
Q ss_pred hhcccCCC--ccCCCCCeEEEe-eccccCCcccccccCccceeEec-ccccccCCCCCCccch--HHHHHHHHHhCCCCC
Q 046230 63 IQDCFGRP--ISSAPDAWFDVV-ERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCT--PRVIESLKKYSPSTC 136 (489)
Q Consensus 63 ~~~~~~~~--i~~~~G~~i~~~-dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~--~a~~~~l~~~~~~~~ 136 (489)
..+.||.+ +++++|+|+||. | |++|||| ++.+...++|+||+|. +|+.+++.+......
T Consensus 13 ~~~~~p~~~~~~~a~G~~l~D~~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~ 77 (431)
T TIGR03251 13 LTDGFDLVLDLDRSRGSVLVDARD---------------GRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKP 77 (431)
T ss_pred hccCCceeeEEEeccCCEEEECCC---------------CCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhccc
Confidence 44567766 499999999996 9 9999999 5557788998899999 999999987532111
Q ss_pred CcccCCCcchhHHHHHHHHHHHhC---CCCEEEeCccHHHHHHhHhhhc----------C-----CCCEEEEcCCCchHH
Q 046230 137 SSRVDGGTLMVHNELEECVARFVG---KPAAIVFGMGYVTNSAILPVLM----------R-----KGSLIISDSLNHNSI 198 (489)
Q Consensus 137 ~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~al~----------~-----~g~~Vl~~~~~h~~~ 198 (489)
+... -.++...++.++|++..+ .+.+++.+||++|+..+++... + +..+|.+...+|+.+
T Consensus 78 ~~~~--~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t 155 (431)
T TIGR03251 78 SNSD--VYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRS 155 (431)
T ss_pred ccCC--CCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcc
Confidence 1111 125556778888888752 2456667999999966665542 1 234666788888888
Q ss_pred HHHHHhcCCeEEE-------------e-----cC-------------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 199 VNGARGSGATIRV-------------F-----QH-------------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 199 ~~~~~~~g~~~~~-------------~-----~~-------------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
...+..++..... . +. ++++++++.+... +.+.++||+|
T Consensus 156 ~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~iAavivE 225 (431)
T TIGR03251 156 GYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAER----------PHDIACFIAE 225 (431)
T ss_pred hhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhC----------CCcEEEEEEe
Confidence 7766665421000 0 11 0122333333321 2578999999
Q ss_pred CcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcceEEEe
Q 046230 248 GIYSMEGELC----KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCGGYIAG 322 (489)
Q Consensus 248 ~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~ 322 (489)
|+++..|.+. ++++|+++|++||++||+||+++ +||++|.+ .++++|+.| ||+ +++|++.. ||++.+
T Consensus 226 Pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t--G~GrtG~~~a~~~~gv~P---Di~--~~gK~~~~-~g~~~~ 297 (431)
T TIGR03251 226 PIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT--GVGLTGTAWAYQQLGVQP---DIV--AFGKKTQV-CGIMAG 297 (431)
T ss_pred ccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh--ccCccchHHHHHhcCCCC---CEE--EecccCcc-ceEEec
Confidence 9999999875 49999999999999999999999 99999987 788999999 999 89999833 577766
Q ss_pred CH--HHHHHH-H-hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe-ee--
Q 046230 323 SK--ELIQYL-K-YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE-VL-- 393 (489)
Q Consensus 323 ~~--~~~~~l-~-~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-v~-- 393 (489)
.+ ++.+.. . ...+..+| ++||+.++++.++|+++ ..+++.++++++++++++.|+++ .++ +.
T Consensus 298 ~~i~~~~~~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~ 368 (431)
T TIGR03251 298 RRVDEVADNVFAVPSRLNSTW--GGNLVDMVRATRILEII-------EEERLVDNARVQGAHLLARLHELAAEFPHLVSN 368 (431)
T ss_pred chHHHhhhhcccCccccCCCC--CCCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCccceec
Confidence 54 223211 1 11123333 49999999999999998 44567889999999999999875 222 22
Q ss_pred CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 394 GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
....+.++.+.+........+.+.|+++||++.+ .+.+.+||+|++.+|++|||+++++|++
T Consensus 369 vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~-------~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 369 PRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLG-------CGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ccccceeEEEEeCCHHHHHHHHHHHHhCCeEEec-------CCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 2234677777775544556799999999999873 2346799999999999999999999976
No 99
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=9.2e-37 Score=313.82 Aligned_cols=343 Identities=17% Similarity=0.188 Sum_probs=255.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
+++..+.+++|+|+||.| |++||||.+ .....++|+||.+++|+.+++.+... . ...
T Consensus 29 ~~p~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~------~~~ 86 (423)
T TIGR00713 29 PTPFFVARGKGAYLYDVD---------------GNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTS-Y------GAP 86 (423)
T ss_pred CCCeeEEeccCCEEEeCC---------------CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-C------CCC
Confidence 456778999999999999 999999954 45667888899999999999987321 1 123
Q ss_pred chhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhc---------------
Q 046230 145 LMVHNELEECVARFVGK-PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGS--------------- 205 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~--------------- 205 (489)
++...+|+++|+++++. +..++++||++|+..+++. .+++..+|..+..+|+........+
T Consensus 87 ~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 166 (423)
T TIGR00713 87 TEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGV 166 (423)
T ss_pred CHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCC
Confidence 56678999999998865 4566669999999665553 4566666666666777543222110
Q ss_pred ----CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 206 ----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 206 ----g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
+.....++++|+++|++++.+. +.+.++|++|++++++|.+.+ +++|+++|++||++||+||
T Consensus 167 ~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DE 236 (423)
T TIGR00713 167 PEDFAKLTLVLPYNDLEALEEVFEEY----------GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDE 236 (423)
T ss_pred CcccccceEEeCCCCHHHHHHHHHHc----------CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEc
Confidence 1124567788999999988752 135789999999999998866 7999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC---CCcccccCCCHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC---PAHLYATSISPPAAEQ 350 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~---~~~~~~~~~~p~~~aa 350 (489)
+|+ ++ ++|.. ..+++++.| |++ ||||++++ | |++++++++++.+.... +..+| +++|+.|++
T Consensus 237 v~~--g~-r~g~~~~~~~~~~~p---Di~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~~~~T~--~~~~~~~aa 305 (423)
T TIGR00713 237 VMT--GF-RVALGGAQEYFGVEP---DLT--TLGKIIGG-GLPVGAFGGRREIMERLAPEGPVYQAGTL--SGNPLAMAA 305 (423)
T ss_pred ccc--cc-ccCcchhHHHhCCCc---chh--hhhhhhcC-CCceeeeeEHHHHHHhhCcCCCeeeccCC--CCCHHHHHH
Confidence 999 88 66654 667889888 887 99999985 6 99999999999986432 22233 599999999
Q ss_pred HHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh----CCCeeeCCCCCCeEEEEeCCCC-------------cHHH
Q 046230 351 IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK----MGFEVLGDNDSPVMPIMLYNPA-------------KIPA 413 (489)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~v~~~~~~~~~~~~~~~~~-------------~~~~ 413 (489)
++++|+.++ .++..++++++++++++.|++ .++.......+.++.+.+..+. ....
T Consensus 306 a~a~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 378 (423)
T TIGR00713 306 GLATLKLLD-------EEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAK 378 (423)
T ss_pred HHHHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHH
Confidence 999999983 233666777777777666654 4655432334667777664221 1336
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+.|+++||++.+.++ +.+||+++ +|+++|++++++|+++++++
T Consensus 379 ~~~~l~~~Gv~v~~~~~-------~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 379 FFHEMLDKGVFLPPSQF-------EACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHCCeEEecCCc-------cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 88899999999874322 34788874 89999999999999988653
No 100
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.9e-36 Score=307.93 Aligned_cols=343 Identities=15% Similarity=0.196 Sum_probs=263.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.+++|+++||.| |++||||+++ ....++++||.+.+++.+++++..... . ...
T Consensus 20 ~~~~~~~~~~G~~~~d~d---------------g~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~---~~~ 79 (396)
T PRK02627 20 RLPIAFVRGEGARLWDDD---------------GKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS--N---LYY 79 (396)
T ss_pred CCCceEEeeeeCEEEeCC---------------CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc--c---ccC
Confidence 456778999999999999 9999999653 334455557899999999998753221 1 124
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc---CC-----CCEEEEcCCCchHHHHHHHhcCC---------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM---RK-----GSLIISDSLNHNSIVNGARGSGA--------- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~---~~-----g~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (489)
++...++++.++++.+.+..+++++|++++..+++++. ++ .+++..+..+|+....+....+.
T Consensus 80 ~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 80 IEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred CHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 67788999999999888888888999999977777543 22 34556666777766655554432
Q ss_pred ---eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcccc
Q 046230 208 ---TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 208 ---~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa~s 280 (489)
.+..++++|+++|++.+.. +.++|+++++++++|... ++++|+++|++||++||+||+|+
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~~-------------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~ 226 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAITD-------------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT 226 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcCC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc
Confidence 2345677899999988732 567888899999888432 38999999999999999999999
Q ss_pred cccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 281 IGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 281 ~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
+||++|.+ ..+.+++.| |++ ||||++++ | |++++++++++.+....+..+++ .||+.++++.++|+
T Consensus 227 --g~g~~g~~~~~~~~~~~p---di~--t~sK~~~~-G~rig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~~~l~ 296 (396)
T PRK02627 227 --GMGRTGKLFAYQHYGIEP---DIM--TLAKGLGG-GVPIGAVLAKEKVADVFTPGDHGSTFG--GNPLACAAALAVIE 296 (396)
T ss_pred --CCCccCceeeehhcCCCC---CEE--EEcchhhC-CcccEEEEEcHHHHhccCCCCCCCCCC--CCHHHHHHHHHHHH
Confidence 89999875 556778877 887 89999995 7 99999999998886544444454 89999999999999
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee--eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEV--LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPA 432 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~ 432 (489)
.+ ..++.+++++++++++++.|+++ .++. .....+.++++.+ .....++++.|+++||.+.+.
T Consensus 297 ~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~l~~~Gv~v~~~---- 363 (396)
T PRK02627 297 II-------EEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIEL--DRPAAEIVKKALEKGLLINVT---- 363 (396)
T ss_pred HH-------hhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEe--cCcHHHHHHHHHHCCeEEeec----
Confidence 87 33567788888888888888775 2221 1223456666665 345678999999999999842
Q ss_pred cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 433 TPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 433 ~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+++||+|++.+|++++++++++|+++++++
T Consensus 364 ---~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 364 ---GDNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ---CCCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 24779999999999999999999999988654
No 101
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=7.3e-36 Score=306.56 Aligned_cols=353 Identities=16% Similarity=0.165 Sum_probs=266.0
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||+| |++||||.+ .+...++|+||++.+++.++++++....... ..
T Consensus 22 ~~p~~~~~~~G~~l~d~d---------------G~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~----~~ 82 (425)
T PRK08088 22 IHPIFADRAENCRVWDVE---------------GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQV----LA 82 (425)
T ss_pred CCCceEEeeeeCEEEeCC---------------CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccc----cC
Confidence 356778999999999999 999999954 5667788889999999999999865322110 12
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHh---HhhhcCCCCEEEEcCCCchHHHHHHHhcCCe----------
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAI---LPVLMRKGSLIISDSLNHNSIVNGARGSGAT---------- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~---~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~---------- 208 (489)
++...++.+.+++..+. ++.++.+||++|+..+ ++++.+++++|.+...+|+.+.......+..
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 44557899999998764 4667779999988444 4445678888888888888876655543311
Q ss_pred -----EEEec--CCC------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCc
Q 046230 209 -----IRVFQ--HNT------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKA 271 (489)
Q Consensus 209 -----~~~~~--~~d------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~ 271 (489)
...++ .++ +++|++++++.. .++..++|++|+++++.|.+.+ +++|+++|++||+
T Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~ 234 (425)
T PRK08088 163 PGHVYRALYPCPLHGVSEDDAIASIERIFKNDA--------APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGI 234 (425)
T ss_pred CCCcEEcCCCccccCccHHHHHHHHHHHHHhcc--------CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 01111 111 445777665210 1246889999999999988766 9999999999999
Q ss_pred EEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHH
Q 046230 272 YIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPA 347 (489)
Q Consensus 272 ~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~ 347 (489)
++|+||+|+ ++|++|.+ ..+.+++.| ||. ||||++++ | ||+++++++++.+.......+++ .+|+.
T Consensus 235 ~lI~Dev~~--g~g~~g~~~~~~~~~~~p---di~--s~sK~l~~-G~rig~v~~~~~~~~~~~~~~~~~t~~--~~~~~ 304 (425)
T PRK08088 235 MLIADEVQT--GAGRTGTLFAMEQMGVAA---DLT--TFAKSIAG-GFPLAGVTGRAEVMDAIAPGGLGGTYA--GNPIA 304 (425)
T ss_pred EEEEecccc--CCCcCcchhHHhhcCCCC---CEE--EEeccccC-CCcceeeEecHHHHhhcCCCCCCCCCC--cCHHH
Confidence 999999999 89999876 556778777 876 99999986 7 99999999999987666555555 89999
Q ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC--------CcHHHHH
Q 046230 348 AEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP--------AKIPAFS 415 (489)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~--------~~~~~~~ 415 (489)
++++.++|+.+ ..++.++++++.++++++.|.++ +........+.++++.+..+ .....+.
T Consensus 305 ~~a~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~ 377 (425)
T PRK08088 305 CAAALAVLKVF-------EQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIV 377 (425)
T ss_pred HHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHH
Confidence 99999999987 44567888888888888888765 22111222377788877321 2356899
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||.+.+... ..+.+||+|++.+|+++|++++++|.++++.+
T Consensus 378 ~~~~~~Gv~~~~~~~-----~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 378 ARARDKGLILLSCGP-----YYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHhCCCEEecCCC-----CCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 999999998874211 13789999999999999999999999998754
No 102
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=2.4e-35 Score=299.50 Aligned_cols=337 Identities=19% Similarity=0.246 Sum_probs=257.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc---ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS---YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s---~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (489)
+++..+.+++|.+++|.| |+++|||++ ++++|+ ++|.+.+++.+++.++.... ..
T Consensus 8 ~~~~~~~~~~g~~~~~~~---------------g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~--~~--- 65 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVN---------------GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVS--NL--- 65 (379)
T ss_pred CCCccEEEeecCEEEeCC---------------CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccc--cc---
Confidence 578899999999999999 999999977 577776 46899999999999865321 11
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---cC----CCCEEEEcCCCc-hHHHHHHHhcC--------
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---MR----KGSLIISDSLNH-NSIVNGARGSG-------- 206 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---~~----~g~~Vl~~~~~h-~~~~~~~~~~g-------- 206 (489)
...+.+.++++++++++|.+..+++++|++++..+++++ .. +++.|++..++| +....+....+
T Consensus 66 ~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~ 145 (379)
T TIGR00707 66 YYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGF 145 (379)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccC
Confidence 235778999999999999988888899999997766654 23 356666655554 43333332221
Q ss_pred ----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcc
Q 046230 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa 278 (489)
.....++++|+++|++.+.+ +..+|+++++++++|... ++++|.++|++||+++|+||+
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~~~~-------------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~ 212 (379)
T TIGR00707 146 EPLVPGFSYAPYNDIESLKKAIDD-------------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEV 212 (379)
T ss_pred CCCCCCceeeCCCCHHHHHHHhhh-------------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 12345667799999988864 344666788888888643 389999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ ++|++|.+ .....++.| |++ ||||++++ | ||+++++++++.+........++ .+++.++++.++
T Consensus 213 ~~--~~~~~g~~~~~~~~~~~~---d~~--t~sK~~~~-G~riG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~aa 282 (379)
T TIGR00707 213 QT--GIGRTGKFFAYEHYGIEP---DII--TLAKGLGG-GVPIGATLAKEEVAEAFTPGDHGSTFG--GNPLACAAALAV 282 (379)
T ss_pred cc--CCCccchhhhHHhcCCCC---CEE--EEcccccC-CcccEEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHHH
Confidence 98 78888865 334567766 777 89999994 6 99999999999987655444554 899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee---CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL---GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
|+.+ ...+..+++++++++++++|++++.... ....+.++++.+.. ...++.+.|.++||.+.+
T Consensus 283 L~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~Gv~v~~---- 349 (379)
T TIGR00707 283 LEVI-------EKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCKDIVKKALEKGLLVNC---- 349 (379)
T ss_pred HHHH-------HhhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHHHHHHHHHHCCcEEee----
Confidence 9987 3356788899999999999987633221 11245566666543 357899999999999984
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+.+++||+++..+|++++++++++|+++
T Consensus 350 ---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 350 ---AGPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ---CCCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 23478999999899999999999999875
No 103
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=2.9e-36 Score=308.96 Aligned_cols=342 Identities=17% Similarity=0.205 Sum_probs=245.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||.| |++|||| ++.+...++|+||+|.+|+.+|+++... . ...
T Consensus 29 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~------~~~ 86 (431)
T PRK06209 29 LAPGFIQRGSGAHVWDVD---------------GNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-F------TRP 86 (431)
T ss_pred CCCeEEEeccCCEEEeCC---------------CCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-C------CCC
Confidence 345678999999999999 9999999 4556778898899999999999997432 1 112
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhh---hcCCCCEEEE-cCCCchH---HHHHHHhc-C------CeE
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPV---LMRKGSLIIS-DSLNHNS---IVNGARGS-G------ATI 209 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~-~~~~h~~---~~~~~~~~-g------~~~ 209 (489)
+....++.++|++.++ .+.+++.+||++|+..+++. .+++..++.+ ...+|+. +......+ + ..+
T Consensus 87 ~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~ 166 (431)
T PRK06209 87 SAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALT 166 (431)
T ss_pred CHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccc
Confidence 3444578999999875 35666779999999666554 3455444444 2333321 10000011 1 124
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 210 RVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
..++++|+++|++++++. +.+.++|++|+++++.+...+|++|+++|++||++||+||||+ ++++++.
T Consensus 167 ~~~~~~d~~~l~~~l~~~----------~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t--G~~~~~~ 234 (431)
T PRK06209 167 VTFRYNDIASLEALFEDH----------PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT--GFRWHMR 234 (431)
T ss_pred cccCCCCHHHHHHHHHhC----------CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--cCCcCcc
Confidence 567899999999998752 2467899999999986666779999999999999999999998 8887766
Q ss_pred ccccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHH--HHhh--CCCccc--ccCCCHHHHHHHHHHHHHHHcc
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQY--LKYT--CPAHLY--ATSISPPAAEQIISAIKVILGE 361 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~--l~~~--~~~~~~--~~~~~p~~~aa~~a~L~~i~~~ 361 (489)
+..+++++.| ||+ |++|++|+ ++|++++++++++. +... ...+.+ +.++||+.|++++++|++++
T Consensus 235 g~~~~~gv~P---Di~--t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~-- 307 (431)
T PRK06209 235 GAQKLYGIVP---DLS--CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR-- 307 (431)
T ss_pred hhhHHhCCCc---cee--eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh--
Confidence 6666789988 998 99999986 34999999999987 3211 122222 23478999999999999993
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCC-CCCCeEEEEeC-----CCCc--HHHHHHHHhhCCceEEeec
Q 046230 362 DGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGD-NDSPVMPIMLY-----NPAK--IPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~-~~~~~~~~~~~-----~~~~--~~~~~~~l~~~Gi~v~~~~ 429 (489)
.+++++++++++++|++.|+++ ++..... .+.++....+. .+.. ...+.+.|+++|+++.
T Consensus 308 -----~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p--- 379 (431)
T PRK06209 308 -----DEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP--- 379 (431)
T ss_pred -----ccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc---
Confidence 3468899999999999998764 4432111 12332222221 1112 2267888999999763
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
| ++++..||++||++++++|+++++++
T Consensus 380 ----~-------l~is~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 380 ----S-------LVVSYAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred ----c-------ccccccCCHHHHHHHHHHHHHHHHHH
Confidence 1 34456999999999999999999887
No 104
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-35 Score=278.06 Aligned_cols=351 Identities=19% Similarity=0.234 Sum_probs=265.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|+.+.+++|+.++|.| |++||||+| .+..+++|.+|++.+++.+++.++++++....
T Consensus 37 ~~pv~~~~gkg~kl~D~~---------------g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~----- 96 (433)
T KOG1401|consen 37 RYPVVIESGKGSKLFDPD---------------GKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYF----- 96 (433)
T ss_pred CCceeeecceeeeeecCC---------------cceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccc-----
Confidence 567888999999999999 999999954 56677787799999999999999988764332
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhhc---CCC------CEEEEcCCCchHHHHHHHhcCC-----
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVLM---RKG------SLIISDSLNHNSIVNGARGSGA----- 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al~---~~g------~~Vl~~~~~h~~~~~~~~~~g~----- 207 (489)
+....++++.+.+.+++ +.+++.+|||+||..+++... ..+ ..|.+.+.+|+.+...+...+.
T Consensus 97 t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~ 176 (433)
T KOG1401|consen 97 TLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL 176 (433)
T ss_pred cHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC
Confidence 33367899999999854 567777999999966555432 222 3788999999988877765432
Q ss_pred -------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEE
Q 046230 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 208 -------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~D 276 (489)
.+.....||+.+|++.++.+ .+..++||+||+++..|.+. ++..|+++|+++|++||.|
T Consensus 177 ~~~p~~p~v~~~~ynd~t~l~k~~~~h----------~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~D 246 (433)
T KOG1401|consen 177 PFDPIAPDVVTAEYNDSTALEKLFESH----------KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFD 246 (433)
T ss_pred CCCCCCCceeecccCCHHHHHHHHHhC----------CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEee
Confidence 23445678999999999874 23579999999999888663 3899999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCC---CcccccCCCHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCP---AHLYATSISPPAAE 349 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~---~~~~~~~~~p~~~a 349 (489)
|+++ +|||.|.+ +.+++++.| ||+ |++|.+|+ | |+..+++++++.+....+ +.+|+ +||++|.
T Consensus 247 EV~t--G~gR~g~~~a~e~~~~~P---DI~--t~aK~L~g-GlPigA~~v~~kV~~~i~~~~~l~hg~Tf~--gnpLacs 316 (433)
T KOG1401|consen 247 EVQT--GLGRLGYGWAQEYFGVTP---DIT--TVAKPLGG-GLPIGATGVRDKVAEMISPGDHLYHGGTFS--GNPLACS 316 (433)
T ss_pred hhhh--CccccchHHHHHHhCcCC---cce--eehhhccC-CceeEEEeehHHHHhhcCCCCccccCcccC--CChhhhh
Confidence 9999 99999987 889999999 999 99999988 7 999999999999987766 66666 9999999
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeC-CCCCCeEEEEeCCCCcHHHHHHHHhhCCce
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLG-DNDSPVMPIMLYNPAKIPAFSRECLRQNVA 424 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 424 (489)
++..+|+.+ ...+.++++...++.|++.|.+. +..+.+ ..++.++++.+..+. ..+.+...+.|.+
T Consensus 317 a~~~~l~~l-------~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~--~~~~d~~~~~~ll 387 (433)
T KOG1401|consen 317 AGIKVLDEL-------KDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV--YKFADAAREQGLL 387 (433)
T ss_pred HHHHHHHHH-------cCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech--hhhhhhhhhhhHH
Confidence 999999999 56888999999999999999875 222222 333445555544332 2233333333333
Q ss_pred EEeecCCCcCCCCCeEEEee----cCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 425 VVTVAFPATPLLLARARICI----SASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 425 v~~~~~p~~~~~~~~iRi~~----~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+...+-. .....+||.| +..+|+|.++++++++.+.+.++.
T Consensus 388 ~~~~~~~---~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 388 ILTLGKG---LLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred HHHHhcc---cccceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 2211000 0012345544 235679999999999999988764
No 105
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=5e-33 Score=276.77 Aligned_cols=307 Identities=17% Similarity=0.207 Sum_probs=232.8
Q ss_pred cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcCC
Q 046230 107 SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMRK 184 (489)
Q Consensus 107 s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~~ 184 (489)
-|||||++++ |.+.+++.+++++|+ |..+++.+|++.+|+++|. +.++++++|+++|..++.++.++
T Consensus 26 ~~~ylgl~~~-~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~ 94 (346)
T TIGR03576 26 LYDLTGLAGG-FKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPP 94 (346)
T ss_pred ccccccCCCC-hhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCC
Confidence 3699999975 899999999999985 4578999999999999998 78888899999999999999999
Q ss_pred CCEEEE---cCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC---CC
Q 046230 185 GSLIIS---DSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL---CK 258 (489)
Q Consensus 185 g~~Vl~---~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~---~~ 258 (489)
||.|++ +.++|.++..++++.|+++ +.++|+++++ .. ++.+.+++ .+ .+|+|.+ .+
T Consensus 95 gd~Vli~~~d~p~~~s~~~~~~l~ga~~--~~~~~l~~l~----~~----------~~~~lIii-tg-~s~~G~v~~~~~ 156 (346)
T TIGR03576 95 GRKVVHYLPEKPAHPSIPRSCKLAGAEY--FESDELSELK----KI----------DGTSLVVI-TG-STMDLKVVSEED 156 (346)
T ss_pred CCEEEECCCCCCCchhHHHHHHHcCCEE--eccCCHHHHh----hC----------cCceEEEE-EC-CCCCCcccCHHH
Confidence 999984 4789999999999999975 3456665532 11 12344444 44 4899988 68
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEEEeCHHHHHHHHhhCCCc
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKELIQYLKYTCPAH 337 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~~~~~~l~~~~~~~ 337 (489)
|++|+++|++||++|++||+|+.|.++..|.+....++ .|++++||||++ |..|||+++++++++.++.....+
T Consensus 157 L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~ 231 (346)
T TIGR03576 157 LKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQF 231 (346)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCc
Confidence 99999999999999999999997766655554332332 379999999998 666799999999999999888877
Q ss_pred ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHH
Q 046230 338 LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417 (489)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (489)
.++ .+|+.++++.++|+.+ ..+..++.++++.+++.+.++.+ .+...+.+ ++++.+........+.+.
T Consensus 232 ~~s--~~~~~~~aa~~aL~~~-------~~~~~~~~l~~r~~~~~~~l~~~--~~~~~~~~-f~~~~~~~~~~~~~~~~l 299 (346)
T TIGR03576 232 GLE--AQAPLLAAVVRALEEF-------ELSRIRDAFKRKEEVYLRLFDKL--NVERTPTG-FVIKGVEEEKLIEIGLDL 299 (346)
T ss_pred ccC--ccHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHHHHHHHhC--CCCcCCCe-EEEEeCCCCCHHHHHHHH
Confidence 665 7888999999999865 33567788888988888888854 44333333 444444321122344455
Q ss_pred HhhCCceEEee-cCCCcCCCCCeEEEeecCCCCHH---HHHHHHHHHHHHH
Q 046230 418 CLRQNVAVVTV-AFPATPLLLARARICISASHTKE---DLIKALEVISRVG 464 (489)
Q Consensus 418 l~~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~e---did~~l~~l~~~~ 464 (489)
|.++||.+++. +|+ ...+++||++. ..++ +++.++++|++.+
T Consensus 300 l~~~gV~v~~~~~f~---~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 300 LRNYGIITITAVGMP---GASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHhCCEEEeCCcccC---CCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 55679999973 232 23579999994 3343 7999999998754
No 106
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=3.2e-33 Score=300.77 Aligned_cols=351 Identities=14% Similarity=0.133 Sum_probs=251.4
Q ss_pred CCccCCCCC----eEEEeeccccCCcccccccCccc----eeEeccc-ccccCCCC-CCccchHHHHHHHHHhCCCCCCc
Q 046230 69 RPISSAPDA----WFDVVERFSNDSNKTLKRTNKVN----RCLNLGS-YNYLGFAA-SDEYCTPRVIESLKKYSPSTCSS 138 (489)
Q Consensus 69 ~~i~~~~G~----~i~~~dr~~~~~~~~~~~~~~g~----~~id~~s-~~~lg~~~-~~~~v~~a~~~~l~~~~~~~~~~ 138 (489)
.+|+++.|. |++|.+ |+ +|||++| .+..++++ .||++++|+.+|+.++++....
T Consensus 341 ~vi~~a~G~~~~~~~~d~~---------------G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~- 404 (817)
T PLN02974 341 TVIDSRCGEDFSVYKPKTN---------------STCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFP- 404 (817)
T ss_pred eEEEeeecCceeEEEECCC---------------CCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccC-
Confidence 345677776 777666 87 9999954 47788884 4899999999999998765421
Q ss_pred ccCCCcchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhh----c---C---------------CCCEEEEcCC
Q 046230 139 RVDGGTLMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVL----M---R---------------KGSLIISDSL 193 (489)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al----~---~---------------~g~~Vl~~~~ 193 (489)
.-.++...+|.++|++..+. +.+++.++|++|+..+++.. . + +..+|.....
T Consensus 405 ---~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gs 481 (817)
T PLN02974 405 ---ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGS 481 (817)
T ss_pred ---ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCC
Confidence 12477889999999997653 35566689999995544432 1 1 3347778899
Q ss_pred CchHHHHHHHhcCCe--------E-E-----Ee--c--------------CC--C-------------------------
Q 046230 194 NHNSIVNGARGSGAT--------I-R-----VF--Q--------------HN--T------------------------- 216 (489)
Q Consensus 194 ~h~~~~~~~~~~g~~--------~-~-----~~--~--------------~~--d------------------------- 216 (489)
+|+.+..++.+++.. . . .+ + .+ +
T Consensus 482 YHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~ 561 (817)
T PLN02974 482 YHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPL 561 (817)
T ss_pred cCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhh
Confidence 999988877766521 0 0 01 0 00 0
Q ss_pred ----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 217 ----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 217 ----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
.+.+++.|++.... ..+.+.++||+||+ ++..|.+.+ +++|+++|++||++||+|||++ +|||+
T Consensus 562 ~~~~~~~le~~l~~~~~~-----~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T--GfGRt 634 (817)
T PLN02974 562 AKAYRSYIEQQLDEYEAS-----AKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT--GLWRL 634 (817)
T ss_pred hHHHHHHHHHHHHhhccc-----cCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc--CCCcc
Confidence 02344444321110 01357899999996 787887754 8999999999999999999999 99999
Q ss_pred CCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh------hCCCcccccCCCHHHHHHHHHHHH
Q 046230 288 GRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY------TCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 288 G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~------~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
|++ .++++|+.| ||+ +++|++++ | |++++++++++.+.. ..++++|+ +||+.||+++++|+
T Consensus 635 G~~fa~e~~gv~P---DIi--~~gKgLtg-G~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~--gnpl~cAaala~L~ 706 (817)
T PLN02974 635 GVESAWELLGCKP---DIA--CYAKLLTG-GLVPLAATLATEEVFEAFRGPSKLDALLHGHSYT--AHPMGCAAAAKALQ 706 (817)
T ss_pred cchhhHHhcCCCC---CEE--eecccccC-CCCccEEEEEcHHHHHhhccccccCCcccCCCCC--cCHHHHHHHHHHHH
Confidence 998 889999999 999 99999987 6 889999999998852 12444555 99999999999999
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHH-hC-CCeeeCC--CCCCeEEEEeCCCC--------cHHHHHHHHh-hCCc
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQ-KM-GFEVLGD--NDSPVMPIMLYNPA--------KIPAFSRECL-RQNV 423 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~-g~~v~~~--~~~~~~~~~~~~~~--------~~~~~~~~l~-~~Gi 423 (489)
+++. .+..++..++..++++++.+.|. .+ .++.+++ ..+.++.+.+..+. ....+.+.|+ ++||
T Consensus 707 ~~~~---~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl 783 (817)
T PLN02974 707 WYKD---PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGI 783 (817)
T ss_pred HHHc---ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCE
Confidence 9942 11234566666777777777763 22 2332222 23566666664321 1346788889 8999
Q ss_pred eEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 424 AVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 424 ~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++.+ . .+++++.+|+.+++++++++++++.+.+
T Consensus 784 ~~r~-------~-Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 784 YARP-------L-GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEe-------c-CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9984 2 2789999999999999999999998765
No 107
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=2.3e-33 Score=278.84 Aligned_cols=273 Identities=21% Similarity=0.295 Sum_probs=215.6
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHH
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHN 149 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (489)
|++++|.|+||.| |++||||+ ++...+++|+||++.+++.+++.+.+..... ...++...
T Consensus 2 i~~a~G~~l~d~d---------------G~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~----~~~~~~~~ 62 (339)
T PF00202_consen 2 IERAEGAYLWDVD---------------GREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFS----GFTHPEAA 62 (339)
T ss_dssp EEEEEBTEEEETT---------------SEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTT----TSEEHHHH
T ss_pred eEEeecCEEEECC---------------CCEEEECCCCccceecCCCccccchhHHHHhhhccccccc----ceeccchh
Confidence 6789999999999 99999994 5677899999999999999999986553311 12477788
Q ss_pred HHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcC------------
Q 046230 150 ELEECVARFVG--KPAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSG------------ 206 (489)
Q Consensus 150 ~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g------------ 206 (489)
+|.++|.+.++ .+.+++.+||++|+..+++... ++..+|.....+|+.+...+.+++
T Consensus 63 ~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 142 (339)
T PF00202_consen 63 ELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLY 142 (339)
T ss_dssp HHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSS
T ss_pred hhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccc
Confidence 99999999994 4566777999999955554433 566667778888887766555432
Q ss_pred CeEEEecCCCHHH----------HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcE
Q 046230 207 ATIRVFQHNTPSH----------LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAY 272 (489)
Q Consensus 207 ~~~~~~~~~d~~~----------Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~ 272 (489)
..+..+|.++... +++.+.+.. +++.++||+||+++..|.+. .+++|+++|+|||++
T Consensus 143 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 143 PGVVFVPFPDPAADEEEQACLNALEELIAALN---------ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp TTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH---------GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred cccccccCCccchhhhHHHHHHHHHHHHHhhc---------CCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 2345677777665 444443321 24789999999999888663 389999999999999
Q ss_pred EEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHH
Q 046230 273 IYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAA 348 (489)
Q Consensus 273 li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 348 (489)
+|+||+++ ++||+|.. .+++++++| ||+ |++|++++ | |++++++++++.+....++.+|+ ++|+.|
T Consensus 214 lI~DEV~t--G~gRtG~~~a~~~~gv~P---Div--~~gK~l~g-G~p~sav~~~~~i~~~~~~~~~~~T~~--g~p~~~ 283 (339)
T PF00202_consen 214 LIADEVQT--GFGRTGKFFASEHYGVDP---DIV--TFGKGLGG-GLPISAVLGSEEIMEAFQPGSHGSTFG--GNPLSC 283 (339)
T ss_dssp EEEEETTT--TTTTTSSSSGHHHHTSSS---SEE--EEEGGGGT-TSSEEEEEEEHHHHTTSCTTSSTCTTT--T-HHHH
T ss_pred eecccccc--cccccCCccceecccccC---ccc--ccccchhh-hhhcccccccchhhccccccccccccc--cchHhh
Confidence 99999999 99999998 789999999 999 99999987 6 88999999999887666666666 999999
Q ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 349 EQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
++++++|+++ +.+++.+++++.+++|+++|+++
T Consensus 284 aaa~~~l~~~-------~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 284 AAALATLEIL-------EEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp HHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHhh-------ccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 55778899999999999999876
No 108
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=1.9e-31 Score=269.40 Aligned_cols=321 Identities=16% Similarity=0.224 Sum_probs=243.0
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcc-----hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTL-----MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISD 191 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~-----~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~ 191 (489)
...+.+++.+++++|+.++++++...|+. +...++++.+|+++|.+..+++++|++++..++.++.++||.|+++
T Consensus 17 ~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~ 96 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLD 96 (370)
T ss_pred CCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEEC
Confidence 46789999999999999887776655543 3567888889999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHH
Q 046230 192 SLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264 (489)
Q Consensus 192 ~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~ 264 (489)
.+.|.+...+++..|++++.++++ |+++|++.+....... ..+..+|++.++.+++|.+.|+++|.+
T Consensus 97 ~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~------~~~~~lv~~~~p~~~~G~~~~l~~i~~ 170 (370)
T TIGR02539 97 GLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDES------GKPPVLALLTHVDGEYGNLPDAGKVAK 170 (370)
T ss_pred CcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhcc------CCCcEEEEEECCCCCCccccCHHHHHH
Confidence 999999988999999999999986 8999999886421110 013446777788899999999999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhCCCccccc-
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCPAHLYAT- 341 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~~~~~~~~- 341 (489)
+|++||+++|+||+|+.|.++.++. . .++|++++|++|++++.| ||+++++++++.++....++.+..
T Consensus 171 la~~~~~~livDea~~~g~~~~~~~------~---~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~ 241 (370)
T TIGR02539 171 VCREKGVPLLLNCAYTVGRMPVSAK------E---IGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEV 241 (370)
T ss_pred HHHHcCCeEEEECccccCCcCCCHH------H---cCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCcccee
Confidence 9999999999999999764433321 1 134899999999998766 999999999999887665443321
Q ss_pred -----CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee--CCCCCCeEEEEeCC-------
Q 046230 342 -----SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL--GDNDSPVMPIMLYN------- 407 (489)
Q Consensus 342 -----~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~--~~~~~~~~~~~~~~------- 407 (489)
+.....++++.++|+... +.-+...+..++.+++++.|+++|++++ .+..++++.+.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~al~~~~------~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~ 315 (370)
T TIGR02539 242 ELLGCTSRGAPIVTMMASFPHVV------ERVKRWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQK 315 (370)
T ss_pred eeecccccccHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhh
Confidence 122224555566666431 1122234445556799999999999864 24456666554431
Q ss_pred -CCcHHHHHHHHhhCCce-EEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 408 -PAKIPAFSRECLRQNVA-VVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 408 -~~~~~~~~~~l~~~Gi~-v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
......+.+.|+++||. +. +...+++|+++. .+|++|+++++++|++++++
T Consensus 316 ~~~~~~~~~~~L~e~GI~~ir-------~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 316 HKRRGYFLYEELKKRGIHGIR-------SGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hccccHHHHHHHHhCCCcccc-------CCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 12344689999999997 33 122468999984 78999999999999988764
No 109
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=9.3e-32 Score=274.68 Aligned_cols=333 Identities=20% Similarity=0.224 Sum_probs=247.8
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHH-HHhCCCCCCcccCCCcchhHHHHHH----HHHHHhCCCCEEE-eCccHH
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESL-KKYSPSTCSSRVDGGTLMVHNELEE----CVARFVGKPAAIV-FGMGYV 172 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~i~-~~sG~~ 172 (489)
++.||+ .|+||+ +|.+.+++...+ .+|+.++++++...| ++.+.+|++ ++++++|.+.+++ ++||+.
T Consensus 28 ~~~~~l~~sen~~-----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~ 101 (416)
T PRK13034 28 QDHLELIASENFT-----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQ 101 (416)
T ss_pred hcCeeecccccCC-----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHH
Confidence 467776 788987 689999999995 889999999999888 688999999 9999999999866 589999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchH-HHHHHHhc--CCeE--EEecC------CCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNS-IVNGARGS--GATI--RVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~-~~~~~~~~--g~~~--~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
||..++.+++++||.|+++..+|++ +..+++.. +... ..+++ .|++++++.++.. ..+
T Consensus 102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----------~~k 170 (416)
T PRK13034 102 ANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-----------KPK 170 (416)
T ss_pred HHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc-----------CCe
Confidence 9999999999999999999999988 44455442 2222 34555 5899999988641 234
Q ss_pred EEEEE-cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceE
Q 046230 242 IMVIV-EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGY 319 (489)
Q Consensus 242 ~~viv-e~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~ 319 (489)
+|++ ++++ |...++++|.++|++||++||+|++|++|.++. |.. .+. ...+|++++|++|++ |+.||+
T Consensus 171 -lVi~~~~~~---g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~-g~~----~~~-~~~~Di~~~s~~K~l~g~~GG~ 240 (416)
T PRK13034 171 -LIIAGFSAY---PRELDFARFREIADEVGALLMVDMAHIAGLVAA-GEH----PNP-FPHAHVVTTTTHKTLRGPRGGM 240 (416)
T ss_pred -EEEECCCcc---ccccCHHHHHHHHHHcCCEEEEeCcccccCccc-CCC----CCC-CCCceEEEEeCcccCCCCCCeE
Confidence 4455 5555 456789999999999999999999999887763 221 111 134699999999999 555788
Q ss_pred EEeCHHH-HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CC
Q 046230 320 IAGSKEL-IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-ND 397 (489)
Q Consensus 320 i~~~~~~-~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~ 397 (489)
++++++. .+.++........+...+|..++++++.++.+. .+..++++++.++.++|++.|+++|+++... ..
T Consensus 241 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~-----~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~ 315 (416)
T PRK13034 241 ILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ-----PEFKTYAKQVIANAQALAEVLKERGYDLVSGGTD 315 (416)
T ss_pred EEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC-----hhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCC
Confidence 8886544 444443222111122334444444445555441 1335678999999999999999999988642 56
Q ss_pred CCeEEEEeCCCC-cHHHHHHHHhhCCceEEe------ecCCCcCCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 046230 398 SPVMPIMLYNPA-KIPAFSRECLRQNVAVVT------VAFPATPLLLARARICISA----SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 398 ~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~------~~~p~~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~ 466 (489)
++++++.+.+.. ....+.+.|.++||.+.. ..+|++ ..++|++++. .+|++|+++++++|.+++..
T Consensus 316 t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~---~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 316 NHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFV---TSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCC---CCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 899999887765 345566888888999986 333333 5789999988 78899999999999999874
Q ss_pred h
Q 046230 467 V 467 (489)
Q Consensus 467 ~ 467 (489)
.
T Consensus 393 ~ 393 (416)
T PRK13034 393 L 393 (416)
T ss_pred C
Confidence 3
No 110
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=6.5e-32 Score=246.48 Aligned_cols=355 Identities=14% Similarity=0.122 Sum_probs=272.1
Q ss_pred CCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 68 GRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
|.-|.+++|.|+.|.+ |++|||+. +|....+|.||++++|..+||...... .|+. ++.
T Consensus 30 P~kivRaq~QYmfDE~---------------g~~yLDCI-nNVaHvghchp~VV~A~~kQmat~~tN---~RFl---hd~ 87 (452)
T KOG1403|consen 30 PLKIVRAQGQYMFDEE---------------GTRYLDCI-NNVAHVGHCHPEVVRAGAKQMATISTN---NRFL---HDE 87 (452)
T ss_pred chhhehhccceeeccC---------------cccHHHHh-hhhhhcccCCHHHHHHHHHHHhHhccc---chhh---HHH
Confidence 4568899999999988 99999986 444666777999999999999875433 2332 333
Q ss_pred HHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHhcCCe-----------EEEe
Q 046230 148 HNELEECVARFVG-KPAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARGSGAT-----------IRVF 212 (489)
Q Consensus 148 ~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~~g~~-----------~~~~ 212 (489)
..+.++.|..-++ .+-+++++||++||..+++ -+++..|+|..+..+|+.....+..+..+ .+.+
T Consensus 88 lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHV 167 (452)
T KOG1403|consen 88 LVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHV 167 (452)
T ss_pred HHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEe
Confidence 3445555554444 4556667999999955544 46789999999999998766555443211 1111
Q ss_pred -c------------CC---C-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 046230 213 -Q------------HN---T-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 213 -~------------~~---d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~ 267 (489)
| ++ | .+.+++++.+..+.| ...++++.|..+|.+|.+.| ++.+.+..+
T Consensus 168 APcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g-------~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr 240 (452)
T KOG1403|consen 168 APCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKG-------QGVAAFIAESLQSCGGQIIPPAGYFQAVADAVR 240 (452)
T ss_pred cCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcC-------CcHHHHHHHHHHhcCCcccCchhHHHHHHHHHh
Confidence 1 11 2 356788888776665 47888999999999999866 889999999
Q ss_pred HcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccC
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATS 342 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~ 342 (489)
.+|-+.|.||++. +|||-|+. +.+.+++-| ||+ |++|.+|. | +.+++++++.+.+....-.+..+.+
T Consensus 241 ~aGGv~IaDEVQv--GFGRvG~hyWafq~y~fiP---DIV--tmgKpmGN-GhPVa~VattkeIA~Af~atgv~YFNTyG 312 (452)
T KOG1403|consen 241 SAGGVCIADEVQV--GFGRVGSHYWAFQTYNFIP---DIV--TMGKPMGN-GHPVAAVATTKEIAQAFHATGVEYFNTYG 312 (452)
T ss_pred cCCCeEEeehhhh--cccccchhhhhhhhhcccc---chh--eecccCCC-CCeeeEEeccHHHHHHhccccceehhccC
Confidence 9999999999999 99999985 778889888 999 99999998 7 9999999999999876655555556
Q ss_pred CCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCCC--eEEEEeCC------C--Cc
Q 046230 343 ISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDNDSP--VMPIMLYN------P--AK 410 (489)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~~--~~~~~~~~------~--~~ 410 (489)
+||++||+++++|+++ +.+++.++.++.+++|...|+++ .++++++.++- ++++.+-. | ..
T Consensus 313 GnPVsCAv~laVm~v~-------e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~ 385 (452)
T KOG1403|consen 313 GNPVSCAVGLAVMRVC-------EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKE 385 (452)
T ss_pred CCchhHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHH
Confidence 9999999999999999 77899999999999999999987 67778887763 23333211 1 12
Q ss_pred HHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 411 IPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 411 ~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
+..+..+|.+. +|++... ....|.+.|-||.+.+++++++.+..|++++..+..+.
T Consensus 386 A~~~v~rlke~y~VLlsaD-----GPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee~~ 442 (452)
T KOG1403|consen 386 AHWVVNRLKELYRVLLSAD-----GPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEERL 442 (452)
T ss_pred HHHHHHHHHHhhhEEEecC-----CCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHHHH
Confidence 33566777776 7988843 34568999999999999999999999999998665444
No 111
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-30 Score=258.17 Aligned_cols=335 Identities=19% Similarity=0.225 Sum_probs=255.8
Q ss_pred ceeEecccccccCCCCC--CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--------CCEEEeCc
Q 046230 100 NRCLNLGSYNYLGFAAS--DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--------PAAIVFGM 169 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~s 169 (489)
..+|||+ .|.+.. |+.+.+++.+++.+-+... ....|. .+|++.+|+++.. ++.|++|+
T Consensus 28 ~~vi~l~----iG~Pd~~~p~~i~~a~~~a~~~~~~~Y---~~~~G~----~~LReaia~~~~~~~~~~~~~~~eiivt~ 96 (393)
T COG0436 28 EDVIDLS----IGEPDFPTPEHIIEAAIEALEEGGTHY---TPSAGI----PELREAIAEKYKRRYGLDVDPEEEIIVTA 96 (393)
T ss_pred CCEEEeC----CCCCCCCCCHHHHHHHHHHHhcccCCC---CCCCCC----HHHHHHHHHHHHHHhCCCCCCCCeEEEeC
Confidence 4699998 665533 5678999998888743211 133455 6677777766532 24477776
Q ss_pred cHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-----C---CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 170 GYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-----N---TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 170 G~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~---d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
|+.. +..++.++.++||.|+++.|+|.++.....+.|++++.++. + |.++|++.+.. +
T Consensus 97 Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-------------k 163 (393)
T COG0436 97 GAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-------------K 163 (393)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-------------c
Confidence 6655 58899999999999999999999999999999999998873 2 67888887764 3
Q ss_pred cEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCc
Q 046230 241 KIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSC 316 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~ 316 (489)
+.+|++....||||.+.+ +++|+++|++||++||.||+|. .+-.+|........+.+ .+.-|.+.||||.++++
T Consensus 164 tk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~--~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt 241 (393)
T COG0436 164 TKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYE--ELVYDGAEHPSILELAGARDRTITINSFSKTYGMT 241 (393)
T ss_pred ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhh--hcccCCCCcCCHhhcCCCcceEEEEeccccccccc
Confidence 446777788899998865 8999999999999999999999 88888742122233333 34568899999999999
Q ss_pred c---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 046230 317 G---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE 391 (489)
Q Consensus 317 G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 391 (489)
| ||++++ +++++.+........++ .+.+.+.++.++|+.-. .....+..++.++++++.+.+.|.++ |+.
T Consensus 242 GwRvG~~v~~~~~l~~~~~~~~~~~~~~--~~~~~Q~aa~~aL~~~~---~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~ 316 (393)
T COG0436 242 GWRIGWVVGPPEELIAALRKLKSYLTSC--APTPAQYAAIAALNGPQ---SDEVVEEMREEYRERRDLLVEALNEIGGLS 316 (393)
T ss_pred ccceeEeecChHHHHHHHHHHHHhcccC--CCHHHHHHHHHHhcCcc---chHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 9 999999 88888887554443334 78888888999887320 01245566688999999999999988 588
Q ss_pred eeC-CCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 392 VLG-DNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 392 v~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.. +.+++.++..+....+..+|+.+|+++ ||.++|......+.+.+++||++ ..+.++++++++++.+.++..
T Consensus 317 ~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~--~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 317 VVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSL--ATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred eccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEE--ecCHHHHHHHHHHHHHHHHhc
Confidence 877 557777777666656788999999988 89999855444435778999999 566799999999999987653
No 112
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.98 E-value=4.7e-29 Score=253.46 Aligned_cols=304 Identities=17% Similarity=0.231 Sum_probs=229.3
Q ss_pred ccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC----
Q 046230 139 RVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---- 214 (489)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---- 214 (489)
+...+..+.+.++++.+|+++|.+..+++++|++++..++.++.++|+.|+++.+.|.+...+++..|++++.+++
T Consensus 56 ~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~ 135 (387)
T PRK09331 56 RLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP 135 (387)
T ss_pred ccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc
Confidence 4444556778999999999999998888888899998889999999999999999999999889999999999887
Q ss_pred ---CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcc
Q 046230 215 ---NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV 291 (489)
Q Consensus 215 ---~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~ 291 (489)
.|++++++.+++...+. ..+..+|+++++++++|.+.|+++|.++|++||+++|+|++|+.|.+...+.
T Consensus 136 ~~~~d~~~l~~~l~~~~~~~------~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~-- 207 (387)
T PRK09331 136 EYKITPEAYAEKIEEVKEET------GKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK-- 207 (387)
T ss_pred CCCcCHHHHHHHHHHhhhcc------CCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH--
Confidence 27899999887532110 0134567778888999999999999999999999999999999775544332
Q ss_pred ccccCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhCCCcc------cccCCCHHHHHHHHHHHHHHHccCC
Q 046230 292 CELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCPAHL------YATSISPPAAEQIISAIKVILGEDG 363 (489)
Q Consensus 292 ~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~~~~~------~~~~~~p~~~aa~~a~L~~i~~~~~ 363 (489)
. .++|++++|++|++++++ |++++++++++.+......+. ++++.++...++++++++.+.
T Consensus 208 --~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~---- 276 (387)
T PRK09331 208 --K-----LGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV---- 276 (387)
T ss_pred --H-----cCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH----
Confidence 1 234899999999997543 999999999888765443221 333455555666677777663
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEEEeCC--------CCcHHHHHHHHhhCCceEEeecCCC
Q 046230 364 SSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYN--------PAKIPAFSRECLRQNVAVVTVAFPA 432 (489)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~p~ 432 (489)
+..+++++..++.+++++.|+++ |+++... ..++++.+.... .....++.+.|.++||...+
T Consensus 277 --~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~----- 349 (387)
T PRK09331 277 --ERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK----- 349 (387)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc-----
Confidence 22345667788899999999999 9988742 235555444331 11234689999999998542
Q ss_pred cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 433 TPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 433 ~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
.+...+|...+..+|++|+++++++|++++++++.+
T Consensus 350 --~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~~~ 385 (387)
T PRK09331 350 --PGATKEFKLSTYGLTWEQVEYVADAFKEIAEKYGLE 385 (387)
T ss_pred --cCCceEEEEEeccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 233444544455699999999999999998876643
No 113
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=3.9e-30 Score=259.65 Aligned_cols=336 Identities=26% Similarity=0.314 Sum_probs=248.3
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHH--HhCCCCCCcccCCCcchhHHHHHHHHHHHhC------C-CC-EEEeCcc
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLK--KYSPSTCSSRVDGGTLMVHNELEECVARFVG------K-PA-AIVFGMG 170 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~--~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~~-~i~~~sG 170 (489)
++|||+++++.....+ +.+.+++.+..+ ... .....++....+.+|++.+|++++ . ++ .+++++|
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G 76 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATS----SSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSG 76 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHH----TGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESH
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcc----cccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecc
Confidence 5899999998888655 555555555544 111 112233445566999999999998 1 34 7999999
Q ss_pred HHHH-HHhHhhh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 171 YVTN-SAILPVL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQ-------HNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 171 ~~a~-~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+.++ ..+...+ .++++.|+++.|.|..+...++..|.+++.++ +.|+++|++.+++...++ .++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-------~~~ 149 (363)
T PF00155_consen 77 AQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKG-------PRP 149 (363)
T ss_dssp HHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTT-------ETE
T ss_pred cccchhhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccc-------ccc
Confidence 9888 5556666 67999999999999999999999999999998 559999999998743221 034
Q ss_pred EEEEEcCcCCCCCCCCCh---HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCKF---PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l---~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
.+|++.++++|+|...+. ++|+++|++||+++|+||+|....++..+.... ...++.....|+++||||+||.+|
T Consensus 150 ~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~Gl 228 (363)
T PF00155_consen 150 KAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGL 228 (363)
T ss_dssp EEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGG
T ss_pred ceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccccccc
Confidence 577778889999998775 555555999999999999999444443322110 222222222589999999999889
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.++.....+. .+.+.++++.+.+..-.. ...+.++.+++++++.+++.+.|++.|+.+..+
T Consensus 229 RvG~i~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 302 (363)
T PF00155_consen 229 RVGYIVAPPELIERLRRFQRSGL----SSSPMQAAAAAALSDPEL--VEKWLEELRERLRENRDLLREALEEIGITVLPP 302 (363)
T ss_dssp TEEEEEEEHHHHHHHHHHHHHTT----SSHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHH
T ss_pred ccccccchhhhhhhhhhcccccc----ccchhhHHHHHhhhcccc--cccccccchhhHHHHHHHHHHHHHHhhhheeec
Confidence 999999999999887654322 255555555555543210 001557788999999999999999999999877
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
..+.++++.+... +..++.++|+++ ||.+.+..++.. ++++|+++ +.++++++++++++|
T Consensus 303 ~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~~---~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 303 EAGFFLWVRLDPN-DAEELAQELLEEYGILVRPGSYFGV---PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SBSSEEEEEESHH-HHHHHHHHHHHHHTEEEEEGGGGTS---TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred cCccEEEEEcccc-hHHHHHHHHHHhCCEEEEecCCCCC---CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 7777766665543 667899999999 999999766654 68999999 789999999999986
No 114
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=3.8e-28 Score=245.52 Aligned_cols=339 Identities=17% Similarity=0.194 Sum_probs=242.4
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHH----HHHHHHHhCCCCE-EEeCccHH
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNEL----EECVARFVGKPAA-IVFGMGYV 172 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~ 172 (489)
++.|++ .|-|++ .|.+.+++.-.+.. |..+..+.+...|. +...++ .++..++++.+.+ +-.-||+.
T Consensus 49 ~~~l~LiasEN~~-----s~~v~~a~~s~l~nkyaeg~pg~ryy~g~-~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~ 122 (493)
T PRK13580 49 RSSLKLIASENYS-----SLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD 122 (493)
T ss_pred hcCceEecccccC-----CHHHHHHhcccccccCcCCCCCccccCCC-chHHHHHHHHHHHHHHHhCCCcccccCCCcHH
Confidence 456776 444443 35566666655543 66666666665554 333333 3445566777644 44589999
Q ss_pred HHHHhHhhhcCC-------------------------------CCEEEEcCCCchHHHH---HHHhcC--CeEEEecCC-
Q 046230 173 TNSAILPVLMRK-------------------------------GSLIISDSLNHNSIVN---GARGSG--ATIRVFQHN- 215 (489)
Q Consensus 173 a~~~~~~al~~~-------------------------------g~~Vl~~~~~h~~~~~---~~~~~g--~~~~~~~~~- 215 (489)
||.++..++.+| ||.|+.-.+.++.... ....++ ...+.++.+
T Consensus 123 An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~ 202 (493)
T PRK13580 123 ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDP 202 (493)
T ss_pred HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCc
Confidence 999999998875 7888866555433211 111122 223333322
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 216 -----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
|++++++.+++ .++.++++ +..+. |...|+++|+++|++||++|++|++|++|.++ |..
T Consensus 203 ~~g~iD~d~l~~~~~~------------~~plvii~-g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~ 266 (493)
T PRK13580 203 DTGLLDYDEIAALARE------------FKPLILVA-GYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKV 266 (493)
T ss_pred ccCccCHHHHHHHHhh------------cCCEEEEe-Ccccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--ccc
Confidence 78999998876 34445554 33333 45779999999999999999999999999887 332
Q ss_pred cccccCCCCCCccEEEccccccc-CCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHH
Q 046230 291 VCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQ 369 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (489)
..+.++.. .++||+++|++|+| |+.||+|++++++++.+... .+++++++.+|..++++.+ +..++. .+..+
T Consensus 267 ~~~~~~~~-~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avA-l~e~~~----~ef~~ 339 (493)
T PRK13580 267 FTGDEDPV-PHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVA-LAEART----PEFQK 339 (493)
T ss_pred chhhcCCC-CCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHH-HHHHhC----ccHHH
Confidence 22222221 35799999999999 77789999999999998644 4678888888876666665 444421 13367
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeC-CCCCCeEEEEeCCCCcHH-HHHHHHhhCCceEEeecCCCcCCC---CCeEEEee
Q 046230 370 KLARIRENSNFFRSELQKMGFEVLG-DNDSPVMPIMLYNPAKIP-AFSRECLRQNVAVVTVAFPATPLL---LARARICI 444 (489)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~g~~v~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~Gi~v~~~~~p~~~~~---~~~iRi~~ 444 (489)
.++++.+|.++|++.|++.|+.+.. ...++++++.+.+..... .+.+.|.+.||.+....+|++|.+ ..+|||++
T Consensus 340 y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 340 YAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 8999999999999999999998753 356899999997765444 677789999999999999999887 89999999
Q ss_pred cC----CCCHHHHHHHHHHHHHHHHHh
Q 046230 445 SA----SHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 445 ~~----~~t~edid~~l~~l~~~~~~~ 467 (489)
++ .++++|++++++.|.++++..
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 88 567999999999999988754
No 115
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.9e-27 Score=242.95 Aligned_cols=331 Identities=18% Similarity=0.220 Sum_probs=238.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CC-CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KP-AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~-~~i~~~sG 170 (489)
+.+++||+.++. .++. ++.+.+++.+.+.+... . ++ ...|. .+|++.+|++++ .+ +.|++++|
T Consensus 31 ~~~~i~l~~g~p-~~~~-~~~~~~~~~~~~~~~~~-~-~y-~~~G~----~~lr~aia~~~~~~~g~~~~~~~~I~it~G 101 (399)
T PRK07681 31 GHKMIDLSIGNP-DMPP-ADFVREEMVHTANQKES-Y-GY-TLSGI----QEFHEAVTEYYNNTHNVILNADKEVLLLMG 101 (399)
T ss_pred CCCeEEeCCCCC-CCCC-CHHHHHHHHHHHhcccc-C-CC-CCCCc----HHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 567899975542 2222 35666677666543211 0 11 11244 678888888764 23 67888888
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++.. ..++.+++++||.|+++.|+|..+...+...|++++.++.+ |++++++.+.. ..++
T Consensus 102 ~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 169 (399)
T PRK07681 102 SQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD------------KAKM 169 (399)
T ss_pred cHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc------------cceE
Confidence 7766 77778889999999999999999999999999999988764 45666665532 2444
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
+ ++...+|++|.+.+ +++|+++|++||++||+||+|. .+-..+........++. .+..|+++||||.+|.+|
T Consensus 170 v-~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 246 (399)
T PRK07681 170 M-ILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA--EFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS 246 (399)
T ss_pred E-EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccch--hheeCCCCCCChhhCCCCcccEEEEeecccccCCccc
Confidence 4 44456899999977 7889999999999999999999 55433332222233321 234688999999999779
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........++ .+.+.+.++.+.|+. +....++.++.++++.+++.+.|++.|+.+..+
T Consensus 247 RiG~~i~~~~l~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p 319 (399)
T PRK07681 247 RIGYMIGNEEIVRALTQFKSNTDYG--VFLPIQKAACAALRN-----GAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP 319 (399)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999999999987655433333 666777777766642 112556777888999999999999999877666
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+++++++.+.......++.+.|++ +||.+.+.... .+.+.+++||+++ .+++++++++++|.++
T Consensus 320 ~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 320 AGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAF-GPHGEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred CeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhh-CcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 6788888887665567789999988 79999974322 1234579999995 6789999999999873
No 116
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.3e-27 Score=241.59 Aligned_cols=321 Identities=17% Similarity=0.171 Sum_probs=241.0
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~ 175 (489)
+++++||+++ ++++. +|.+.+++.+.+..+.. . +. ....++++.+|++++.+ +.|++++|++.. .
T Consensus 31 ~~~~i~l~~~~~~~~~---~~~~~~a~~~~~~~~~~-y-------~~-~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 31 IADIIKLASNENPLGP---SPKAIEAIRAAADELHR-Y-------PD-GSGFELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CCceEEecCCCCCCCC---CHHHHHHHHHHHHhhcC-C-------CC-CcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 6789999876 56653 36788888887765321 1 11 11368999999999864 678899998876 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
.++.++.++|+.|+++.++|..+...+...|++++.++.+ |++++++.++. +.+ +|++.++++
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~------------~~~-~v~l~~p~n 165 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP------------RTR-LVFIANPNN 165 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCC------------CCc-EEEEeCCCC
Confidence 6677888899999999999988877788889999888764 67777776642 234 455568899
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCC--ccccccCCCCCCccEEEcccccccCCcc---eEEEeCH
Q 046230 252 MEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGR--GVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK 324 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~--~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~ 324 (489)
++|.+.+++++.++++.+ |+++|+||+|. .+...+. ......+. .+..|+++||||.+|.+| ||+++++
T Consensus 166 ptG~~~~~~~l~~l~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVPPDVLVVLDEAYA--EYVRRKDYEDGLELVAK--FPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCcCCCHHHHHHHHHhCCCCcEEEEECcHH--HhccCcCcccHHHHHhh--cCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 999999999999999875 89999999998 4443332 12222222 223588899999999778 9999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM 404 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~ 404 (489)
++++.+...... +. .+++.+.++.+.|+. ....++.++.++++.+.+++.|++.|+.+. +..++++++.
T Consensus 242 ~~~~~l~~~~~~--~~--~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~g~~~~i~ 310 (367)
T PRK02731 242 EIIDALNRVRQP--FN--VNSLALAAAVAALDD------DAFVEKSRALNAEGMAWLTEFLAELGLEYI-PSVGNFILVD 310 (367)
T ss_pred HHHHHHHHccCC--CC--CCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCCceEEEEE
Confidence 999998765543 22 567777777666642 124567778888889999999999888765 3457788888
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+.......++++.|.++||.+.+...+. ..+++|++++ +.+++++++++|+++++
T Consensus 311 ~~~~~~~~~~~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 311 FDDGKDAAEAYQALLKRGVIVRPVAGYG---LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCCCCHHHHHHHHHHCCEEEEeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 7655678899999999999999743322 2468999984 78999999999998764
No 117
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=1.9e-27 Score=244.92 Aligned_cols=338 Identities=19% Similarity=0.186 Sum_probs=248.9
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHH-HHhCCCCCCcccCCCcchhHHHHHH-----HHHHHhCCCCEEEe----C
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESL-KKYSPSTCSSRVDGGTLMVHNELEE-----CVARFVGKPAAIVF----G 168 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~-----~la~~~g~~~~i~~----~ 168 (489)
++.|++ .|-|+. .|.+.+++...+ .+|+.++++.|...|+. .++++|+ .++.|-+.+..+.+ .
T Consensus 34 ~~~l~liasen~~-----s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~ 107 (475)
T PLN03226 34 WKGLELIASENFT-----SRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPL 107 (475)
T ss_pred HcCeeEecCCccC-----CHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcC
Confidence 456776 444443 477899999999 77999999999888875 7788876 44444444555555 8
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcC------CCchHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHHHHhcCC
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDS------LNHNSIVNGARGSGATIR----VFQHN------TPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~------~~h~~~~~~~~~~g~~~~----~~~~~------d~~~Le~~l~~~~~~g~ 232 (489)
||+.||.+++.+++++||.|+.++ .+|++...+.+++..... +++|| |+++|++++.+.
T Consensus 108 SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~----- 182 (475)
T PLN03226 108 SGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF----- 182 (475)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-----
Confidence 999999999999999999999854 667777767666665544 67777 999999998752
Q ss_pred CCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccc
Q 046230 233 PRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKS 312 (489)
Q Consensus 233 ~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~ 312 (489)
..+.+|+.++++++ ..|+++|.++|+++|++|++|++|++|.++..+... .+ ..+|++++|++|+
T Consensus 183 ------~pklIv~~~S~~s~---~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~--p~----~~~Div~~t~hK~ 247 (475)
T PLN03226 183 ------RPKLIIAGASAYPR---DWDYARMRKIADKVGALLMCDMAHISGLVAAQEAAS--PF----EYCDVVTTTTHKS 247 (475)
T ss_pred ------CCeEEEEecCcCCC---ccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC--CC----CCCeEEEecCccc
Confidence 23444545776654 567889999999999999999999999887766431 11 2469999999999
Q ss_pred c-CCcceEEEeCHHHH-----------HH--HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 313 F-GSCGGYIAGSKELI-----------QY--LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 313 ~-g~~GG~i~~~~~~~-----------~~--l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
| |+.||+|+++++++ +. .........+.++.++..+++..++|+.+.. ...++..+++.++.
T Consensus 248 L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~----~~~~~~~~~~~~na 323 (475)
T PLN03226 248 LRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT----PEFKAYQKQVKANA 323 (475)
T ss_pred ccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhC----cCHHHHHHHHHHHH
Confidence 9 78889999887654 33 2222222345556788888889999998842 13467799999999
Q ss_pred HHHHHHHHhCCCeeeCC-CCCCeEEEEe-CCCCcHHHHHHHHhhCCceEEeecCCC--cCCCCCeEEE----eecCCCCH
Q 046230 379 NFFRSELQKMGFEVLGD-NDSPVMPIML-YNPAKIPAFSRECLRQNVAVVTVAFPA--TPLLLARARI----CISASHTK 450 (489)
Q Consensus 379 ~~l~~~L~~~g~~v~~~-~~~~~~~~~~-~~~~~~~~~~~~l~~~Gi~v~~~~~p~--~~~~~~~iRi----~~~~~~t~ 450 (489)
++|++.|++.|+.+... ..++++.+.+ .......++.+.|.+.||.+....-|. .+...+.+|+ ..+..+++
T Consensus 324 ~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~ 403 (475)
T PLN03226 324 AALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVE 403 (475)
T ss_pred HHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCH
Confidence 99999999999998754 2356655555 233456678888888899987532221 2334456888 45567899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 046230 451 EDLIKALEVISRVGDLV 467 (489)
Q Consensus 451 edid~~l~~l~~~~~~~ 467 (489)
+|++++.+.|.++++..
T Consensus 404 ~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 404 KDFEKVAEFLHRAVTIA 420 (475)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999853
No 118
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=4.9e-27 Score=240.37 Aligned_cols=331 Identities=16% Similarity=0.204 Sum_probs=237.3
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---CC-EEEeCccH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---PA-AIVFGMGY 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sG~ 171 (489)
..+|||+.+.+ +++ .++.+.+++.+.+++ +. ..+....|. .+|++.+++++. . ++ .|++++|+
T Consensus 54 ~~~i~l~~G~P-~~~-~~~~~~~~~~~~~~~-~~--~~Y~~~~G~----~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~ 124 (413)
T PLN00175 54 HGAINLGQGFP-NFD-GPDFVKEAAIQAIRD-GK--NQYARGFGV----PELNSAIAERFKKDTGLVVDPEKEVTVTSGC 124 (413)
T ss_pred CCeEecCCCCC-CCC-CCHHHHHHHHHHHhc-CC--CCcCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCH
Confidence 46899873332 222 145677787777765 21 111122234 677777777653 2 23 57777776
Q ss_pred H-HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 V-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 ~-a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
. ++..++.+++++||.|+++.|.|..+...++..|++++.++.+ |+++|++.+.. ..+ +|
T Consensus 125 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~------------~~k-~i 191 (413)
T PLN00175 125 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS------------KTR-AI 191 (413)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc------------Cce-EE
Confidence 4 5577888889999999999999999999999999999888653 56777776643 234 55
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc--
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G-- 317 (489)
++.+.+|++|.+.+ +++|+++|++|++++|+||+|. .+...+.. ..+..+. .+..|+++||||.|+.+|
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~--~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~R 267 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD--KLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWK 267 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccC--ccccCCcccChhhCCCC--cCcEEEEecchhhccCcchh
Confidence 66788899998865 7889999999999999999998 44433322 2222222 234689999999999779
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+........++ .+++.+.++.++|+. .....++.+++++++.+.+.+.|++.|+.+..+.
T Consensus 268 iG~~v~~~~l~~~l~~~~~~~~~~--~s~~~Q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~ 340 (413)
T PLN00175 268 IGWAIAPPHLTWGVRQAHSFLTFA--TATPMQWAAVAALRA-----PESYYEELKRDYSAKKDILVEGLKEVGFKVYPSS 340 (413)
T ss_pred eeeeEeCHHHHHHHHHHHhhccCC--CCHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence 99999999999887655433344 677777777777642 1225677888999999999999999998887776
Q ss_pred CCCeEEEEeCC-C-CcHHHHHHHHhh-CCceEEeec-CCC-cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYN-P-AKIPAFSRECLR-QNVAVVTVA-FPA-TPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 397 ~~~~~~~~~~~-~-~~~~~~~~~l~~-~Gi~v~~~~-~p~-~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+++++++.+.. . ....+|++.|++ +||.+.|.. |.. ...+.+++||+++ .+++++++++++|.++++
T Consensus 341 g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 341 GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 77777776532 2 245789998875 599999832 211 1234579999995 589999999999998765
No 119
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=6e-27 Score=241.46 Aligned_cols=345 Identities=17% Similarity=0.175 Sum_probs=261.8
Q ss_pred ceeEecccccccCCCCC-CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---CCEEEeCccH
Q 046230 100 NRCLNLGSYNYLGFAAS-DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---PAAIVFGMGY 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~-~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~~i~~~sG~ 171 (489)
...++|+.++... ... ...+.+++.+.++.+.... ...++......+|++.+++++. . ++.|++|+|+
T Consensus 89 ~~~i~f~~g~p~~-~~fp~~~~~~~~~~~~~~~~~~~---~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 89 PSVIDFAGGLPDP-SLFPLEALRRALARVLRNYGASL---ALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred CceecCCCCCCCc-ccCCHHHHHHHHHHHHhhcchhh---hhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 5688887433111 111 1244445555555443331 1122333444777777777764 1 4689999999
Q ss_pred HHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 172 VTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 172 ~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
+.. ..+++.++++||.|+++.|+|......++..|++++.++.+ |+++||+.++.. +.++++++
T Consensus 165 q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~-----------~~k~~y~~ 233 (459)
T COG1167 165 QQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQW-----------KPKAVYVT 233 (459)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhc-----------CCcEEEEC
Confidence 876 88888999999999999999999999999999999999887 899999999873 46788899
Q ss_pred cCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEE
Q 046230 247 EGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYI 320 (489)
Q Consensus 247 e~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i 320 (489)
...++++|...+ -++|.++|++||+++|.||+++ .|..++.......+.+..+..|+++||||.+.+ | ||+
T Consensus 234 P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~--el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~P-glRlG~v 310 (459)
T COG1167 234 PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG--ELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAP-GLRLGYV 310 (459)
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcch--hhhcCCCCCCChHhhCCCCCEEEEeeehhhccc-ccceeee
Confidence 999999999877 5799999999999999999999 887777665445566655667999999999988 7 999
Q ss_pred EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCC
Q 046230 321 AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM---GFEVLGDND 397 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~v~~~~~ 397 (489)
++++++++.+.........+ .+.+.++++..-|. .+....+..+.++.++++.+.+.+.|++. ...+..+.+
T Consensus 311 v~p~~~~~~~~~~k~~~~~~--~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~g 385 (459)
T COG1167 311 VAPPELIEKLLRLKQAADLG--PSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEG 385 (459)
T ss_pred eCCHHHHHHHHHHHHHhcCC--CChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCc
Confidence 99999999998776644433 55555454444433 11123356778888899999999999987 345667777
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhCCceEEeec--CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA--FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
|.++|+.+..+.+..++.+.++++|+.+.+.+ |...+...+.+||+++ ..+.+++++++..|.+++++..
T Consensus 386 G~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 386 GLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999988889999999999999999822 3333335679999996 6779999999999999887653
No 120
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=5.2e-27 Score=238.98 Aligned_cols=331 Identities=21% Similarity=0.197 Sum_probs=233.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
+..+|||+.+++- ++ .+|.+.+++.+.+.... ... ++......+|++++|+++ |. ++ .+++++|
T Consensus 31 ~~~~i~l~~~~p~-~~-~~~~~~~~~~~~~~~~~--~~~----Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G 102 (389)
T PRK08068 31 GHDVINLGQGNPD-QP-TPEHIVEALQEAAENPA--NHK----YSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFG 102 (389)
T ss_pred CCCeEEecCCCCC-CC-CCHHHHHHHHHHHhCCC--CCC----CCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 4568999866542 22 24667788777766411 111 111222378888888886 42 24 6777777
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.+. ..++.+++++|+.|+++.|+|..+...++..|++++.++.+ |++++++.+.. ..++
T Consensus 103 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------------~~~~ 170 (389)
T PRK08068 103 GKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE------------KAKL 170 (389)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc------------cceE
Confidence 6554 77788889999999999999999999999999999888764 34566655532 2444
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccC-CCCCCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLE-VDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~-v~p~~~Di~~~t~sK~~g~~G- 317 (489)
++++ +.+|++|.+.+ +++|+++|++|++++|+||+|. .+...+........ .+..+..|+++||||.||.+|
T Consensus 171 v~l~-~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~--~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl 247 (389)
T PRK08068 171 MYLN-YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG--AIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW 247 (389)
T ss_pred EEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhh--hhccCCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence 5554 45899999877 5788889999999999999998 66555422111111 111233588999999999889
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+......+ ..+.+++.+.++.++|.. ...+.++.+++++++.+++.+.|+++|+.+..+
T Consensus 248 RiG~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~ 320 (389)
T PRK08068 248 RVAFAVGNESVIEAINLLQDHL--FVSLFGAIQDAAIEALLS-----DQSCVAELVARYESRRNAFISACREIGWEVDAP 320 (389)
T ss_pred eeEeEecCHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999999999987765443 233555555655555531 123567788999999999999999999887766
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.++.++++.+.......++++.|++ +||.+.+..... +.+.+++||+++ .+++.+..++++|.+
T Consensus 321 ~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 321 KGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFG-EHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred CeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhC-ccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 6677777777655567889999987 599999733211 234579999995 567788888887764
No 121
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=5.7e-27 Score=238.28 Aligned_cols=332 Identities=17% Similarity=0.209 Sum_probs=232.9
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEeCcc-H
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVFGMG-Y 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG-~ 171 (489)
..+|||+.+.. .++. ++.+.+++.+.+.+... .+....|. .++++.+|+++ |. ++.+++++| +
T Consensus 24 ~~~i~l~~g~~-~~~~-~~~~~~~~~~~~~~~~~---~Y~~~~G~----~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~ 94 (382)
T PRK06108 24 EGVLPLWFGES-DLPT-PDFIRDAAAAALADGET---FYTHNLGI----PELREALARYVSRLHGVATPPERIAVTSSGV 94 (382)
T ss_pred CCeEEecCCCC-CCCC-CHHHHHHHHHHHhcCCC---CCCCCCCC----HHHHHHHHHHHHHHhCCCcCcceEEEeCChH
Confidence 35788874332 2332 46778887777665211 12222344 45666666554 52 356666555 5
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+++..++.++.++|+.|+++.++|..+...++..|++++.++.+ |+++|++.+.. +.+ +
T Consensus 95 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------------~~~-~ 161 (382)
T PRK06108 95 QALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP------------RTR-A 161 (382)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc------------cce-E
Confidence 55678888889999999999999999988889999999888764 45677665532 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCC-CCccccccCCC-CCCccEEEcccccccCCcc-
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKT-GRGVCELLEVD-TADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~-G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G- 317 (489)
+++.++++++|.+.+ +++|+++|+++|+++|+||+|+ .+... +.......++. +.+..++++||||.||.+|
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 239 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE--RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW 239 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh--hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc
Confidence 445577899998765 7899999999999999999999 44332 22222222332 2334688999999998778
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG 394 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~ 394 (489)
||+++++++++.+....... ..+.+++.+.++.++|+. .....++.+++++++.+++.+.|+++ |+.+..
T Consensus 240 RiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (382)
T PRK06108 240 RLGWLVAPPALGQVLEKLIEYN--TSCVAQFVQRAAVAALDE-----GEDFVAELVARLRRSRDHLVDALRALPGVEVAK 312 (382)
T ss_pred ceeeeeCCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 99999999999887553221 123677777777777753 12245778888999999999999887 787766
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+.++.++++.+.......+++++|++ +||.+.+.... .+.+.+++||+++. +++++++++++|.++++
T Consensus 313 p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f-~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 313 PDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAF-GPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 66676777777655567789998865 69999873322 23446899999975 89999999999988764
No 122
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=5.5e-27 Score=237.95 Aligned_cols=331 Identities=16% Similarity=0.183 Sum_probs=233.7
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C----CCEEEeCccH-
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K----PAAIVFGMGY- 171 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~----~~~i~~~sG~- 171 (489)
..|+|+.+.. .++ .++.+.+++.+++.+. ...+....|. .++++.+|++++ . ++.+++++|+
T Consensus 21 ~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~---~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~ 91 (378)
T PRK07682 21 GVISLGVGEP-DFV-TPWNVREASIRSLEQG---YTSYTANAGL----LELRQEIAKYLKKRFAVSYDPNDEIIVTVGAS 91 (378)
T ss_pred CeEEeCCCCC-CCC-CCHHHHHHHHHHHhcC---CCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 4678764321 122 1345677777776531 1111112234 677777777764 2 2357777664
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
+++..++.+++++||.|+++.++|+.+...++..|+.++.++.+ |+++|++++.+ +.+++
T Consensus 92 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~v- 158 (378)
T PRK07682 92 QALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA------------KTKAI- 158 (378)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc------------ccEEE-
Confidence 55688888899999999999999999988888889988877642 57777776643 23444
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc--
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G-- 317 (489)
++.+.++++|.+.+ +++|.++|++|++++|+||+|. .+...+.. .....+. .+..++++||||.||.+|
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR 234 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA--ELTYDEAYTSFASIKGM--RERTILISGFSKGFAMTGWR 234 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh--hcccCCCCCChhhcccc--cCCEEEEecCcccccChhhh
Confidence 44556899998865 8899999999999999999999 55544432 2222222 234689999999999779
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+........ .+.+++.++++.++|+. +..+.++.+++++++.+++.+.|+++|+.+..+.
T Consensus 235 ~G~~~~~~~~i~~l~~~~~~~~--~~~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~ 307 (378)
T PRK07682 235 LGFIAAPVYFSEAMLKIHQYSM--MCAPTMAQFAALEALRA-----GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPG 307 (378)
T ss_pred hhhhhcCHHHHHHHHHHHHhhc--cCCCHHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence 999999999998876543211 23667777777777652 2224677788899999999999999988876666
Q ss_pred CCCeEEEEeC-CCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 397 DSPVMPIMLY-NPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 397 ~~~~~~~~~~-~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++.++++.+. ......++++.|+ ++||.+.+.... .+.+.+++||+++ .+++++++++++|.++++.+
T Consensus 308 g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f-~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 308 GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVF-GESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhh-CcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 6766666553 2345678998887 579999973322 2334689999995 47999999999999988653
No 123
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.9e-26 Score=235.59 Aligned_cols=340 Identities=13% Similarity=0.081 Sum_probs=236.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC---C-CEEEeCccHHH-
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK---P-AAIVFGMGYVT- 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~-~~i~~~sG~~a- 173 (489)
.+..+||+..+.- ....++.+.+++.+.+.+.+. .++....|..++.+.+++.+++..|. + +.|++++|+..
T Consensus 38 ~~~~i~l~~g~~~-~~~p~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVD-AHEPTPGAFELFSAGVERGGV--QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCC-CCCCCHHHHHHHHHHHhcCCC--ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 4667888733322 111246678888777754221 11222235544444444444444463 2 56777777655
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
...++.+++++||.|++..|.|+.+...++..|++++.++.+ |+++|++.+++ +.+ +
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------------~~k-~ 181 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------------GVR-V 181 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh------------cCe-E
Confidence 488888899999999999999999998899999998877642 67788877754 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCcccccc--CCCCCCccEEEcccccccCCcc-
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL--EVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~--~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
|++...+|++|.+.+ +++|+++|++||++||+||+|+ .+-..|....... ..++ +.-|+++||||+++.+|
T Consensus 182 v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~--~~~~~~~~~~~~~~~~~~~-~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 182 FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYS--RLLYDGTSYTHLRALPIDP-ENVITIMGPSKTESLSGY 258 (405)
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCCchhcCCCCc-CcEEEEecchhhccCccc
Confidence 555556899999977 7889999999999999999999 6654443211111 2222 23489999999999778
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG 394 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~ 394 (489)
||+++++++++.+......+.. +.+.+.++++.+.|+. +..+.++.+++++++.+.+.+.|+++ ++.+..
T Consensus 259 RiG~ii~~~~l~~~~~~~~~~~~~--~~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 331 (405)
T PRK06207 259 RLGVAFGSPAIIDRMEKLQAIVSL--RAAGYSQAVLRTWFSE-----PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA 331 (405)
T ss_pred ceEEEEcCHHHHHHHHHHHhHhcc--CCCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 9999999999988765543322 2555666666665541 11245667778888889999999887 777766
Q ss_pred CCCCCeEEEEeCC-CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 395 DNDSPVMPIMLYN-PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 395 ~~~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.++.++++.+.. .....++.+.|+ ++||.+.|..... +...+++||+++ .+++++++++++|.++++++
T Consensus 332 p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~-~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 332 PQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFS-PHTADSIRLNFS--QDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred CCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhC-CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 6678788887754 245678999997 5799999743211 234579999996 47899999999999988654
No 124
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=8.6e-27 Score=237.14 Aligned_cols=331 Identities=18% Similarity=0.180 Sum_probs=231.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---C-CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---P-AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~-~~i~~~sG 170 (489)
|.+++||++++. .++ .++.+.+++.+.+.... ...+....| ..+|++.+|++++ . + +.+++++|
T Consensus 30 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G 101 (385)
T PRK09276 30 GVDVISLGIGDP-DLP-TPDHIIEAMCKAVEDPE--NHQYPSYEG----MLEFRKAVADWYKRRFGVELDPETEVISLIG 101 (385)
T ss_pred CCCEEEecCCCC-CCC-CCHHHHHHHHHHHhCCC--CCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 566889875542 222 13567777777665421 111111123 3678888888773 2 2 35777787
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++.. ..++.+++++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. ..++
T Consensus 102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------------~~~~ 169 (385)
T PRK09276 102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK------------KAKL 169 (385)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc------------cceE
Confidence 7554 77888889999999999999999988899999999887653 35555554432 2344
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
+++ .+.+|++|.+.+ +++|+++|++||+++|+||+|. .+...+........++. .+..|+++||||.||.+|
T Consensus 170 v~l-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 246 (385)
T PRK09276 170 MFI-NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS--EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW 246 (385)
T ss_pred EEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh--heecCCCCCCChhccCCCcCCEEEEecchhhcCCcch
Confidence 444 466899999877 6899999999999999999998 55433332222222322 234688899999999889
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........ .+.+++.+.++.++|+. ...+.++.+++++++.+++.+.|++.|+.+..+
T Consensus 247 RiG~~i~~~~l~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 319 (385)
T PRK09276 247 RIGFAVGNADLIAGLGKVKSNVD--SGVFQAIQEAGIAALNG-----PQEVVEELRKIYQERRDILVEGLRKLGLEVEPP 319 (385)
T ss_pred hheeeeCCHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHcC-----cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 999999999998876544222 23556666666666642 122567778888999999999999998887766
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.++.++++.+.......+++++|++ +||.+.+..... +.+.+++||+++ .+++++.+++++|.+
T Consensus 320 ~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 320 KATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFG-EYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhC-CCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 6677778877655567889999875 699999743322 233579999995 578888888888753
No 125
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1e-26 Score=235.02 Aligned_cols=320 Identities=16% Similarity=0.148 Sum_probs=234.3
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEeCccHHH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVFGMGYVT 173 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG~~a 173 (489)
..|||+.+.. .++ .+|.+.+++.+++.........+ ...| ..+|++.+|+++ |. ++.|++++|+..
T Consensus 27 ~~i~l~~~~~-~~~-~~~~~~~al~~~l~~~~~~~~~Y-~~~g----~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNEN-PYP-PSPALVADIAEAVAEAAAGLNRY-PDRD----AVALRADLAAYLTAQTGVGLTVENVWAANGSNE 99 (368)
T ss_pred ceeEecCCCC-CCC-CCHHHHHHHHHHHhhhhhhhccC-CCCc----hHHHHHHHHHHhhhhccCCCChhhEEECCCHHH
Confidence 4688874421 122 24678888888876421111111 1112 377899999988 32 367888888776
Q ss_pred H-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 174 N-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 174 ~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
. ..++.+++++|+.|+++.|+|..+...++..|.+++.++.+ |+++++++++.. ..+++ ++.
T Consensus 100 ~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~-----------~~~~i-~l~ 167 (368)
T PRK03317 100 ILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEH-----------RPDVV-FLT 167 (368)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhcc-----------CCCEE-EEe
Confidence 6 78888889999999999999999988888889888877543 678888877641 23444 455
Q ss_pred CcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeC
Q 046230 248 GIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGS 323 (489)
Q Consensus 248 ~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~ 323 (489)
+++||+|.+.+.+++.++|+.++++||+||+|+ .|++.|.. .....+..+ ..|+++||||++|.+| ||++++
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~--~~~~~~~~~~~~~~~~~~--~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA--EFRRSGTPSALTLLPEYP--RLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch--hhcccCCcCHHHHHHhCC--CEEEEEechhhhccchhhhhhhhCC
Confidence 779999999999999999999999999999999 77766543 333333323 2488899999999779 999999
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEE
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPI 403 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~ 403 (489)
+++++.+...... ++ .+++.++++.++|+... ...+.++++.++.+.+.+.|++.|+.+..+.++.+++.
T Consensus 244 ~~~~~~l~~~~~~--~~--~s~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 313 (368)
T PRK03317 244 PAVVDALRLVRLP--YH--LSAVTQAAARAALRHAD------ELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFG 313 (368)
T ss_pred HHHHHHHHhcCCC--CC--CCHHHHHHHHHHhhCHH------HHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEe
Confidence 9999999865532 33 78888888888886431 33455677788888999999998987765544433222
Q ss_pred EeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 404 MLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.+ ....++.+.|+++||.+.+.+. .+++||+++ +.+++++++++|+++++
T Consensus 314 ~~---~~~~~~~~~l~~~Gv~v~~~~~------~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 314 RF---ADRHAVWQGLLDRGVLIRDVGI------PGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred cc---CCHHHHHHHHHHCCEEEEeCCC------CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 22 3567899999999999985432 368999983 78899999999998864
No 126
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=1.3e-26 Score=235.92 Aligned_cols=331 Identities=18% Similarity=0.233 Sum_probs=233.5
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCccH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMGY 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG~ 171 (489)
...+||+++++ ..+ .++.+.+++.+.+... ...+....|. .++++.+++++ |. ++ .+++++|+
T Consensus 26 ~~~i~l~~g~p-~~~-~p~~~~~~~~~~~~~~---~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 96 (387)
T PRK08912 26 HGAINLGQGFP-DDP-GPEDVRRAAADALLDG---SNQYPPMMGL----PELRQAVAAHYARFQGLDLDPETEVMVTSGA 96 (387)
T ss_pred CCeEEccCCCC-CCC-CCHHHHHHHHHHHhcC---CCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCcccEEEeCCc
Confidence 35788874432 222 2466777777665431 1112222234 67777777765 32 34 67776665
Q ss_pred -HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 -VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 -~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++...++.++.++||.|+++.++|+.+...++..|++++.++.+ |+++|++.+.. ..++++
T Consensus 97 ~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~v~ 164 (387)
T PRK08912 97 TEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP------------RTKAVL 164 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc------------cceEEE
Confidence 44577888889999999999999999999999999998877653 56777776643 244455
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc---cccccCCCCCCccEEEcccccccCCcc-
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG---VCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~---~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+ ...++++|.+.+ +++|+++|++|++++|+||+|. .+-..+.. ..+..+. .+.+|+++||||.+|.+|
T Consensus 165 l-~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK08912 165 L-NNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE--HVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGW 239 (387)
T ss_pred E-eCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh--hcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCc
Confidence 4 477999998876 7789999999999999999998 44333321 2222222 234799999999999779
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........++ .++...+++.++|.. .....++.+++++++.+++.+.|++.|+.+..+
T Consensus 240 RiG~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 312 (387)
T PRK08912 240 KVGFVCAAPPLLRVLAKAHQFLTFT--TPPNLQAAVAYGLGK-----PDDYFEGMRADLARSRDRLAAGLRRIGFPVLPS 312 (387)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 99999999999887665433343 556566666665531 122456788889999999999999999888777
Q ss_pred CCCCeEEEEeCC---CCcHHHHHHHHhh-CCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYN---PAKIPAFSRECLR-QNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 396 ~~~~~~~~~~~~---~~~~~~~~~~l~~-~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.+++++++.+.. .....++++.|++ +||.+.+.. |.......+++|++++ .+++++++++++|.++++
T Consensus 313 ~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 313 QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARR 385 (387)
T ss_pred CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 777777777754 2456789998865 699999843 2222234579999996 468999999999988765
No 127
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2.2e-26 Score=233.96 Aligned_cols=331 Identities=16% Similarity=0.154 Sum_probs=233.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C----CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K----PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~----~~~i~~~sG 170 (489)
|+.++||++++. .++. ++.+.+++.+.+.... ...+....| ..+|++.+|++++ . ++.+++++|
T Consensus 28 ~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~~~--~~~Y~~~~G----~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G 99 (383)
T TIGR03540 28 GVDVISLGIGDP-DLPT-PKHIVEALCKAAENPE--NHRYPSYEG----MLAYRQAVADWYKRRFGVELDPETEVLSLIG 99 (383)
T ss_pred CCCeEEeCCCCC-CCCC-CHHHHHHHHHHHhCCC--CCCCCCCCC----CHHHHHHHHHHHHHhhCCCCCCCCeEEECCC
Confidence 567888876542 2332 4567777777665311 111111123 3678888888763 2 235777777
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++.. ..++.+++++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. ..++
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------------~~~~ 167 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK------------KAKL 167 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc------------cceE
Confidence 6554 77888889999999999999999998899999999888753 45666665532 2444
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
++++ +.+|++|.+.+ +++|+++|++||++||+||+|. .+...+........++. .+..|+++||||.||.+|
T Consensus 168 v~i~-~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 168 MFIN-YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS--EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred EEEe-CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh--hhccCCCCCcCcccCCCcccCEEEEEecccccCCccc
Confidence 4444 56899999987 7899999999999999999998 54443322222222221 234688899999999889
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........ .+.+.+.+.++.++|+. ...+.++.++.++++.+.+.+.|++.|+.+..+
T Consensus 245 RiG~~i~~~~l~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 317 (383)
T TIGR03540 245 RIGMAVGNADLIAGLGKVKTNVD--SGVFQAIQYAAIAALNG-----PQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP 317 (383)
T ss_pred eeeEEeCCHHHHHHHHHHHHhcc--cCCChHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC
Confidence 999999999998876543222 22555666666666542 123567778889999999999999999888777
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.+++++++.+.......+++++|+ ++||.+.+..... ..+.+++||+++ .+++++++++++|.+
T Consensus 318 ~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFG-EYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhC-ccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 677777887766556788999886 5699999743221 223578999995 678888888887753
No 128
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=9.3e-28 Score=239.91 Aligned_cols=323 Identities=18% Similarity=0.129 Sum_probs=225.3
Q ss_pred ecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC
Q 046230 104 NLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR 183 (489)
Q Consensus 104 d~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~ 183 (489)
||+|+|++|.+ |.+.+++.+.+.... .++......++++.+++++|.++.+++++|++++..++.++.+
T Consensus 1 ~~~~~~~~~~~---~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~ 69 (338)
T cd06502 1 DFRSDTVTGPT---PEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ 69 (338)
T ss_pred CcccccCCCCC---HHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcC
Confidence 68899999844 778888877653221 2234566789999999999966778889999998888899999
Q ss_pred CCCEEEEcCCCchHHHH---HHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC-
Q 046230 184 KGSLIISDSLNHNSIVN---GARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE- 255 (489)
Q Consensus 184 ~g~~Vl~~~~~h~~~~~---~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~- 255 (489)
+|+.|+++.++|.+... .....|++++.++.+ |+++|++++++... .+.+ ++.+|+++++.+++|.
T Consensus 70 ~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~-----~~~~-~~~~v~l~~p~n~g~~~ 143 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDD-----IHFP-PPSLVSLENTTEGGTVY 143 (338)
T ss_pred CCCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCC-----CcCC-cceEEEEEeecCCcccc
Confidence 99999999999987553 245578988888764 77888887764210 0111 3345666666665432
Q ss_pred -CCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceE-EEeCHHHHHHHHhh
Q 046230 256 -LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGY-IAGSKELIQYLKYT 333 (489)
Q Consensus 256 -~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~-i~~~~~~~~~l~~~ 333 (489)
..++++|+++|++||+++|+||+|..+..+..|.... ... .+.|+++.|+||++|.+||+ +++++++++.++..
T Consensus 144 ~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~-~~~---~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~ 219 (338)
T cd06502 144 PLDELKAISALAKENGLPLHLDGARLANAAAALGVALK-TYK---SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRR 219 (338)
T ss_pred CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH-HHH---hcCCEEEEeccccCCCccceEEECCHHHHHHHHHH
Confidence 3558899999999999999999986443333332211 111 23488899999999977754 56788998888765
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC-CCcHH
Q 046230 334 CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN-PAKIP 412 (489)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~ 412 (489)
...+.++.+.+++.++++.++|+.- ...+.++++.++.+++.+.|+++|+.+.. ..++++.+.... .....
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~L~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 291 (338)
T cd06502 220 RKQAGGGMRQSGFLAAAGLAALEND-------LWLRRLRHDHEMARRLAEALEELGGLESE-VQTNIVLLDPVEANAVFV 291 (338)
T ss_pred HHHhCCChhhHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccCCeEEEecCCccHHHH
Confidence 4322222235666677777766521 23456788888899999999999875543 345665555432 22233
Q ss_pred HHHHHHh---hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 413 AFSRECL---RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 413 ~~~~~l~---~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.+.+.+. ++|+.+.+.+ .+++||+++..+|++|++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG-------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC-------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4555554 6799987432 27899999999999999999999864
No 129
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=9.2e-27 Score=236.83 Aligned_cols=332 Identities=15% Similarity=0.202 Sum_probs=235.1
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCcc-HHHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMG-YVTN 174 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG-~~a~ 174 (489)
..++||+.+. ..++. ++.+.+++.+.+.... ..+....|..++.+.+++.+.++.+.. +.+++++| ++++
T Consensus 30 ~~~i~l~~g~-~~~~~-~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGF-PDFDG-PPYLVEALAYAMAAGH---NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCC-CCCCC-CHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 4578887432 22222 4667777777765421 112223355555555666665566642 35777666 5566
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~ 248 (489)
..++.+++++||.|+++.++|..+...++..|++++.++.+ |++++++.++. +.++ |++.+
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~-v~l~~ 171 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP------------RTRL-IILNT 171 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc------------cceE-EEEeC
Confidence 88888889999999999999999999999999999988764 66777776643 2344 45557
Q ss_pred cCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCC---ccccccCCCCCCccEEEcccccccCCcc---eE
Q 046230 249 IYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR---GVCELLEVDTADVDIMMGTFTKSFGSCG---GY 319 (489)
Q Consensus 249 v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~---~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~ 319 (489)
+++++|.+ .++++|.++|++||+++|+||+|. .+-..+. ......+. .+..|+++||||++|.+| ||
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~--~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~ 247 (386)
T PRK09082 172 PHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYE--HIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGY 247 (386)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhh--hhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhh
Confidence 78999977 458999999999999999999998 4333222 22222222 234699999999999889 99
Q ss_pred EEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCC
Q 046230 320 IAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP 399 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~ 399 (489)
+++++++++.+........++ .+.+.+.++.+.|+. ...+.+++++.++++.+++.+.|++.++.+..+.+++
T Consensus 248 iv~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~ 320 (386)
T PRK09082 248 CVAPAALSAEFRKVHQYNTFT--VNTPAQLALADYLRA-----EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTY 320 (386)
T ss_pred hhCCHHHHHHHHHHHhhhcCC--CChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeE
Confidence 999999999887765433333 666666665555431 1235666788889999999999999888887776777
Q ss_pred eEEEEeCC--CCcHHHHHHHHh-hCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 400 VMPIMLYN--PAKIPAFSRECL-RQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 400 ~~~~~~~~--~~~~~~~~~~l~-~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
++++.+.. .....++++.|+ ++||.+.|.. |...+.+.+++||+++ .+++++++++++|.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 321 FQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 77777652 345778988875 5699999843 4333455689999995 478999999998864
No 130
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-26 Score=232.01 Aligned_cols=328 Identities=17% Similarity=0.203 Sum_probs=236.7
Q ss_pred cc-eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-H
Q 046230 99 VN-RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~-~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~ 175 (489)
|+ .+++|+.+. .+++. +|.+.+++.+.+.... .. +.. ...+|++.+|++++. ++.|++++|+..+ .
T Consensus 30 g~~~~~~l~~~~-~~~~~-~~~~~~a~~~~~~~~~-~Y-------~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~ 98 (369)
T PRK08153 30 GRPFRARIGANE-SGFGP-SPSVIAAMREAAAEIW-KY-------GDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLG 98 (369)
T ss_pred CCcceeEecCCC-CCCCC-CHHHHHHHHHHHHHhh-cC-------CCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHH
Confidence 44 457987654 34553 3778888888765411 11 111 147899999999986 4789999999887 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
.++.+++++||.|+++.|+|..+...+...|++++.++. +|..+++++++.... ...+++++ ...++++|
T Consensus 99 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~--------~~~~~i~l-~~P~NPtG 169 (369)
T PRK08153 99 LIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARR--------ENAPLVYL-ANPDNPMG 169 (369)
T ss_pred HHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcc--------cCCcEEEE-eCCCCCCC
Confidence 677777899999999999999998888888999988875 344444444433211 12344444 45688999
Q ss_pred CCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHH
Q 046230 255 ELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQY 329 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~ 329 (489)
.+.+.+++.++++.+ +++||+||+|+ .++..|... .+... .+..|+++||||++|.+| ||+++++++++.
T Consensus 170 ~~~~~~~l~~l~~~~~~~~~lI~DE~y~--~~~~~~~~~--~~~~~-~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~ 244 (369)
T PRK08153 170 SWHPAADIVAFIEALPETTLLVLDEAYC--ETAPAGAAP--PIDTD-DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKA 244 (369)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEeCchh--hhcCcccch--hhhhc-CCCEEEEecchHhccCcchheeeeecCHHHHHH
Confidence 999987777776654 89999999998 776654321 11111 122588999999999779 999999999998
Q ss_pred HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC-C
Q 046230 330 LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN-P 408 (489)
Q Consensus 330 l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~ 408 (489)
+...... ++ .+++.++++.++|+- ....+..++.++++.+++.+.|++.|+.+. +.+++++++.+.. .
T Consensus 245 l~~~~~~--~~--~s~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~~ 313 (369)
T PRK08153 245 FDKVRNH--FG--MNRIAQAAALAALKD------QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRDG 313 (369)
T ss_pred HHHhhcC--CC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCCc
Confidence 8765543 33 788888888888751 124566788888899999999998888654 4567777776642 3
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....++.++|+++||.+.. |..+...+++|+++. ++++++.++++|++++...+
T Consensus 314 ~~a~~l~~~l~~~Gi~v~~---p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 314 AFARAVLDGLIARDIFVRM---PGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred ccHHHHHHHHHHCCeEEee---CCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 4567899999999999853 222234579999984 79999999999999887543
No 131
>PRK07324 transaminase; Validated
Probab=99.96 E-value=1.2e-26 Score=234.71 Aligned_cols=328 Identities=18% Similarity=0.174 Sum_probs=235.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--CCEEEeCccH-HHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--PAAIVFGMGY-VTNS 175 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~-~a~~ 175 (489)
|..+++++-.... +. .++.+ +++.+++.+.....+ ...|. .+|++.+|++++. ++.+++++|+ +++.
T Consensus 25 ~~~~~~~~~~e~~-~~-~~~~~-~~~~~~~~~~~~~Y~---~~~G~----~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 25 ESCIDSLTLEELL-AL-AGKNP-EAFYQELGQKKLTYG---WIEGS----PEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred cCCCCCCcHHHHH-hc-cCcch-HHHHHHHhcCCccCC---CCCCC----HHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 5667777533221 22 13445 888888776333221 12244 7899999998753 4566666665 6668
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~ 248 (489)
.++.+++++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. +.+ +|++..
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~------------~~k-li~i~~ 161 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP------------NTK-LICINN 161 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC------------CCc-EEEEeC
Confidence 8888899999999999999999998899999999888753 55666655432 234 566678
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEe
Q 046230 249 IYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG 322 (489)
Q Consensus 249 v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~ 322 (489)
++|++|.+.+ +++|+++|++||+++|+||+|. .+...+.. ....... +..|.++||||.+|.+| ||+++
T Consensus 162 p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~--~l~~~~~~-~s~~~~~--~~~I~~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 162 ANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR--PLDEDGST-PSIADLY--EKGISTNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc--ccccCCCC-CChhhcc--CCEEEEecchhhcCCccceeEEEec
Confidence 8899999888 8999999999999999999998 66554431 1222222 22588899999999879 99999
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeE
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVM 401 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~ 401 (489)
++++++.+.........+ .+++...++..+|+.. ....++.++.++++.+.+.+.|++. ++.+..+.++..+
T Consensus 237 ~~~li~~~~~~~~~~~~~--~~~~~q~~a~~~l~~~-----~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~ 309 (373)
T PRK07324 237 NEEVIDILRKYRDYTMIC--AGVFDDMLASLALEHR-----DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS 309 (373)
T ss_pred CHHHHHHHHHHhCcEEec--CChHHHHHHHHHHcCH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEE
Confidence 999999998776543333 6666666666666421 1134566677788888888888877 6666666666666
Q ss_pred EEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 402 PIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
++.+..+....+|+++|++ +||.+.|..... ..+++||+++ .+++.+++++++|.+++++
T Consensus 310 ~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~---~~~~iRis~~--~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 310 FVKLDVDMPSEDFCLKLLKETGVLLVPGNRFD---LEGHVRIGYC--CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEeCCCCCHHHHHHHHHHhcCEEEECccccC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 7777655667889999864 599999843222 2368999984 5799999999999998865
No 132
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.7e-26 Score=233.53 Aligned_cols=339 Identities=14% Similarity=0.120 Sum_probs=238.5
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC----CCEEEeCccHHHH-H
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK----PAAIVFGMGYVTN-S 175 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~-~ 175 (489)
.+++++.+.. .++ .++.+.+|+.+.+.... ...+....|..++.+.+++.+++++|. ++.+++++|+... .
T Consensus 28 ~~~~l~~g~~-~~~-~~~~~~~a~~~~~~~~~--~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~ 103 (389)
T PRK05957 28 GTISLGQGVV-SYP-PPPEAIEALNNFLANPE--NHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM 103 (389)
T ss_pred CeEEccCCCC-CCC-CCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH
Confidence 3677763221 122 24567777777665322 122333446667777788888888774 4678888887554 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.+++.+||.|+++.|+|..+...++..|++++.++.+ |++++++.++. +.+ +|++.+.+
T Consensus 104 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------------~~k-lv~~~~p~ 170 (389)
T PRK05957 104 NAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP------------KTR-AIVTISPN 170 (389)
T ss_pred HHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc------------Cce-EEEEeCCC
Confidence 7777788999999999999988877788889998888654 67788877643 234 44455679
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC-CCCCccEEEcccccccCCcc---eEEEeC
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV-DTADVDIMMGTFTKSFGSCG---GYIAGS 323 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v-~p~~~Di~~~t~sK~~g~~G---G~i~~~ 323 (489)
+++|.+.+ +++|+++|++||+++|+||+|. .+...+........+ +..+..|+++||||.+|.+| ||++++
T Consensus 171 NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 248 (389)
T PRK05957 171 NPTGVVYPEALLRAVNQICAEHGIYHISDEAYE--YFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP 248 (389)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEeccch--hccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC
Confidence 99999887 8899999999999999999998 554433221111111 22233588899999999889 999999
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CC-eeeCCCCCCeE
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GF-EVLGDNDSPVM 401 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~v~~~~~~~~~ 401 (489)
+++++.+......... +.+.+.+.++..+|+. +....++.+++++++.+++.+.|+++ ++ .+..+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~ 321 (389)
T PRK05957 249 IHLLEAIKKIQDTILI--CPPVVSQYAALGALQV-----GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYC 321 (389)
T ss_pred HHHHHHHHHHHhhccc--CCCcHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEE
Confidence 9999998876543222 2455556656665541 12245667788899999999999987 43 55555567777
Q ss_pred EEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 402 PIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++.+.......+++++|++ +||.+.+..... +..++++||+++ ..+++++++++++|.+.++.+
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 322 FLKVNTDLNDFELVKQLIREYRVAVIPGTTFG-MKNGCYLRIAYG-ALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred EEeCCCCCChHHHHHHHHHHCCEEEccchhhC-CCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHHhh
Confidence 7777666667789999875 799999743222 223569999995 468999999999999888764
No 133
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=234.05 Aligned_cols=315 Identities=21% Similarity=0.264 Sum_probs=227.2
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHH-
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTN- 174 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~- 174 (489)
++++|||+++ ++++. +|.+.+++.+.+..+.. . + .....++++.+|++++.+ +.+++ ++|+++.
T Consensus 33 ~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~~~~~-y-------~-~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 33 PESIIKLGSNENPLGP---SPKAVEAIEKELSKIHR-Y-------P-EPDAPELREALSKYTGVPVENIIVGGDGMDEVI 100 (361)
T ss_pred ccceEEccCCCCCCCC---CHHHHHHHHHHHHhhcC-C-------C-CCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHH
Confidence 5689999876 55553 37788888877765321 1 1 112378999999999863 55666 7887665
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
..++.++.++|+.|+++.+.|..+...++..|++++.++.+ |++++++.+.. ..++ +++.++
T Consensus 101 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~-v~~~~p 167 (361)
T PRK00950 101 DTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITE------------KTKV-IFLCTP 167 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc------------CCCE-EEEeCC
Confidence 66777788899999999999998888888889998888633 56777766642 2344 444577
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
++++|.+.+.+++.++|+++|+++|+||+|. .+. +........ . .+..++++||||++|.+| ||+++++++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~li~De~y~--~~~--~~~~~~~~~-~-~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 168 NNPTGNLIPEEDIRKILESTDALVFVDEAYV--EFA--EYDYTPLAL-E-YDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCCcCHHHHHHHHHHCCcEEEEECchh--hhC--ccchHHHHH-h-cCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 8999999999999999999999999999998 553 111111111 1 122588899999999879 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.++..... ++ .+++.++++.++|+. .+..++.+++++++.+++.+.|+ +.+. +.+++++++.+
T Consensus 242 ~~~~~~~~~~--~~--~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~~i~~~~- 306 (361)
T PRK00950 242 IDYYMRAKTP--FS--LTRLSQAAAIAALSD------KEYIEKSIEHGIKSREYLYNELP---FKVY-PSEANFVLVDV- 306 (361)
T ss_pred HHHHHHhcCC--CC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHhhcC---eeEC-CCcceEEEEEC-
Confidence 9988776543 22 667777777776642 11345556666666666666664 4543 34567777766
Q ss_pred CCCcHHHHHHHHhhCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTV-AFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
......+++++|.++||.+.+. .|+ ..+++++||+++ +.+++++++++|++++
T Consensus 307 ~~~~~~~~~~~l~~~gv~v~~~~~f~--~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 307 TPMTAKEFCEELLKRGVIVRDCTSFR--GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CCCCHHHHHHHHHHCCEEEeeCCccC--CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 4456789999999999999872 332 234578999984 7889999999998875
No 134
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.3e-26 Score=233.40 Aligned_cols=331 Identities=18% Similarity=0.196 Sum_probs=228.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
|+.++||+.++.... .++.+.+++.+.+.... .. .++......+|++.+|+++ +. ++ .+++++|
T Consensus 34 g~~~i~l~~g~p~~~--~p~~~~~~~~~~~~~~~--~~----~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G 105 (394)
T PRK05942 34 GLDLIDLGMGNPDGA--APQPVIEAAIAALADPQ--NH----GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLG 105 (394)
T ss_pred CCCeEEcCCCCCCCC--CCHHHHHHHHHHHhCCC--Cc----cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccC
Confidence 566899975543322 23456676666654311 11 1122222367888888876 32 33 5777777
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++.. ..++.+++++||.|+++.|+|+.+...+...|++++.++.+ |++++++.+.. +.++
T Consensus 106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 173 (394)
T PRK05942 106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------------QAKI 173 (394)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc------------cceE
Confidence 6554 77788889999999999999999888888889998887653 56777766643 3455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
+++ .+++|++|.+.+ +++|.++|++||+++|+||+|. .+-..+........+.. .+..|.++||||.||.+|
T Consensus 174 i~l-~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 174 LYF-NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA--ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred EEE-cCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch--hhccCCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 444 466999999987 7899999999999999999998 54443332122222221 234588899999999888
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.++.......++ .+.+.+.++.++|+.. ....++.+++++++.+++.+.|++.|+.+..+
T Consensus 251 RiG~i~~~~~l~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 323 (394)
T PRK05942 251 RVGFVVGNRHIIQGLRTLKTNLDYG--IFSALQKAAETALQLP-----DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT 323 (394)
T ss_pred heeeeecCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 99999999999998755432233 5566666666666532 12456778888999999999999988887766
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.++.++++.+.......++..+++ ++||.+.+..... ..+.+++|++++ .+.+.+.+++++|.+
T Consensus 324 ~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 324 KATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFG-EGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred CeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhC-cCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 666677777765555667776655 6799998743221 234579999995 455666666666644
No 135
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=2.2e-26 Score=234.33 Aligned_cols=332 Identities=17% Similarity=0.180 Sum_probs=231.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
|+.++||+.+.. .++. ++.+.+++.+.+.+.. ...+....|. .+|++.+|+++ |. ++ .|++++|
T Consensus 29 ~~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~~~--~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (388)
T PRK07366 29 GKELIDLSLGSS-DLPA-PAHALEAIAQSLHDPS--THGYLLFHGT----LDFREAAAQWYEQRFGLAVDPETEVLPLIG 100 (388)
T ss_pred CCCeEEeCCCCC-CCCC-CHHHHHHHHHHHhCcc--cCCCCCCCCC----HHHHHHHHHHHHHhhCCcCCCcCeEEECCC
Confidence 677899975432 2332 3677788777665321 1111112233 67888888887 32 34 6888888
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+... ..++.+++.+||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. +.++
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 168 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA------------QARL 168 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc------------cceE
Confidence 7665 77888889999999999999999999999999999888764 23444443322 2444
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCC-CccEEEcccccccCCcc
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTA-DVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~-~~Di~~~t~sK~~g~~G 317 (489)
+ ++.+.+|++|.+.+ +++|+++|++||++||+||+|. .+-..+.. .......++. +..|+++||||++|.+|
T Consensus 169 i-~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 169 M-VLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV--DLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred E-EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchh--hcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 4 45567899999866 6788889999999999999999 66444432 2223333332 23478899999999889
Q ss_pred ---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 046230 318 ---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG 394 (489)
Q Consensus 318 ---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~ 394 (489)
||+++++++++.+......+..+ .++..+.+++++|.. ...+.++.++.++++.+++.+.|+++|+.+..
T Consensus 246 lRiG~~v~~~~li~~l~~~~~~~~~~--~~~~~~~~a~~~l~~-----~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 318 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVKAVVDFN--QYRGILNGAIAALTG-----PQATVQQTVQIFRQRRDAFINALHQIGWPVPL 318 (388)
T ss_pred hhheehcCCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 99999999999887665433222 334445555565531 12256778888999999999999998887666
Q ss_pred CCCCCeEEEEeCCC--CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLYNP--AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 395 ~~~~~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+.+++++++.+... ....++++.|+ ++||.+.+.... .+.+.+++||+++ .+++++++++++|.++
T Consensus 319 p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGF-GKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHh-CcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 66787877777543 23567888775 569999973221 1223579999995 5799999999999765
No 136
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=4.9e-26 Score=229.21 Aligned_cols=316 Identities=21% Similarity=0.255 Sum_probs=226.6
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEE-EeCccHHHHHHhHhhhcCCCCEEEEcCCC
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAI-VFGMGYVTNSAILPVLMRKGSLIISDSLN 194 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i-~~~sG~~a~~~~~~al~~~g~~Vl~~~~~ 194 (489)
+.+-+++.+++.+..... + .....+..+++++.+++++|.+ ..+ ++++|++++..++.++..+|+.|++..++
T Consensus 8 ~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~ 83 (356)
T cd06451 8 SNVPPRVLKAMNRPMLGH---R-SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNG 83 (356)
T ss_pred cCCCHHHHHHhCCCccCC---C-CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCC
Confidence 444556666665432211 1 1123456789999999999973 334 55677898888888888999999998887
Q ss_pred chH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHH
Q 046230 195 HNS--IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICK 267 (489)
Q Consensus 195 h~~--~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~ 267 (489)
|.+ +...++..|++++.++.+ |++++++.+++. +.+ +|++..+.+++|.+.++++|.++|+
T Consensus 84 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~-----------~~~-~v~i~~~~~~~G~~~~~~~i~~~a~ 151 (356)
T cd06451 84 VFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQH-----------DIK-AVTLTHNETSTGVLNPLEGIGALAK 151 (356)
T ss_pred chhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhcc-----------CCC-EEEEeccCCCcccccCHHHHHHHHH
Confidence 776 345667789888887643 788888877641 233 4444556788999999999999999
Q ss_pred HcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-c-eEEEeCHHHHHHHHh--hCCCc------
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAGSKELIQYLKY--TCPAH------ 337 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~~~~~~l~~--~~~~~------ 337 (489)
++|+++++|++|++|.. .+.+...++|+++++.+|+|+++ | |+++.++++++.+.. ....+
T Consensus 152 ~~~~~li~D~~~~~g~~---------~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T cd06451 152 KHDALLIVDAVSSLGGE---------PFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLL 222 (356)
T ss_pred hcCCEEEEeeehhccCc---------cccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHH
Confidence 99999999999986532 11221224488989999999854 5 999999998887763 11111
Q ss_pred ---------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC--CC-eEEEEe
Q 046230 338 ---------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND--SP-VMPIML 405 (489)
Q Consensus 338 ---------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~--~~-~~~~~~ 405 (489)
..+.+.++..++++.++++.+.. ...++..++..++.+++++.|++.|+.+..+.. ++ +.++.+
T Consensus 223 ~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 298 (356)
T cd06451 223 LLKYWGEGYSYPHTPPVNLLYALREALDLILE----EGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLV 298 (356)
T ss_pred HHhhhcccCCCCCCChHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEEC
Confidence 12234566667788888887742 134677888899999999999999988764322 23 334444
Q ss_pred CCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 406 YNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.......+++++|.++ ||.+.+...+ ...+++|++++..+|++|+++++++|+++++
T Consensus 299 ~~~~~~~~~~~~L~~~~gI~~~~g~~~---~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 299 PEGVDGDEVVRRLMKRYNIEIAGGLGP---TAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeccccc---ccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 4445678899999999 9999864322 2346999999999999999999999998753
No 137
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.6e-26 Score=232.98 Aligned_cols=317 Identities=18% Similarity=0.206 Sum_probs=234.1
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-HHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-SAI 177 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~~~ 177 (489)
.+++||+++.+. ++. +|.+.+++.+++....... .....++++.+|++++. ++.+++++|++.. ..+
T Consensus 29 ~~~i~l~~n~~~-~~~-~~~v~~a~~~~~~~~~~~p---------~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 97 (359)
T PRK03158 29 EKIVKLASNENP-YGP-SPKVKEAIAAHLDELALYP---------DGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMI 97 (359)
T ss_pred CceEEecCCCCC-CCC-CHHHHHHHHHHHHHhhcCC---------CCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHH
Confidence 368999876432 433 5788999988876532211 12247899999999986 4678888887766 677
Q ss_pred HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 178 LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 178 ~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+.++.++|+.|+++.|+|+.+...+...|+++..++.+ |++++++.+.. +.+ ++++.++++++
T Consensus 98 ~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~------------~~~-~v~i~~p~NPt 164 (359)
T PRK03158 98 SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDE------------QTK-IVWICNPNNPT 164 (359)
T ss_pred HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCC------------CCC-EEEEeCCCCCC
Confidence 77888999999999999999988888889998888764 56676665532 234 45556779999
Q ss_pred CCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCC--ccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 254 GELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGR--GVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 254 G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~--~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
|.+.+.++|.++++. +|+++|+||+|. .+-..+. ......+ ..+..|+++||||++|.+| ||+++++++
T Consensus 165 G~~~~~~~l~~~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~ 240 (359)
T PRK03158 165 GTYVNHEELLSFLESVPSHVLVVLDEAYY--EYVTAEDYPDTLPLLE--KYENLIVLRTFSKAYGLAALRVGYGIASEEL 240 (359)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEECchH--hhcCCcccccHHHHHH--hcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence 999999999998887 599999999998 4432221 1111111 2234689999999999879 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.+...... ++ .|++.++++.++|+. ....+..++.++++.+++.+.|++.|+.+.+. +++++++.+.
T Consensus 241 ~~~~~~~~~~--~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~i~~~~~ 309 (359)
T PRK03158 241 IEKLNIARPP--FN--TTRIAQYAAIAALED------QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIFVDTG 309 (359)
T ss_pred HHHHHHhcCC--CC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cCcEEEEECC
Confidence 9998766542 33 788888888887752 12455666777888888999998888877543 4666666653
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
....++.+.|+++||.+.+..... ..+++||+++ +++++++++++|+++
T Consensus 310 --~~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 --RDANELFEALLKKGYIVRSGAALG---FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred --CCHHHHHHHHHHCCeEEeeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 356789999999999999743222 2478999984 899999999999875
No 138
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.96 E-value=1.8e-26 Score=231.44 Aligned_cols=316 Identities=19% Similarity=0.237 Sum_probs=233.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHH-HHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVT-NSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a-~~~ 176 (489)
+.++|||+++++ +++. +|.+.+++.+++.... .. +... ..++++.+|++++. ++.+++++|++. +..
T Consensus 18 ~~~~i~l~~~~~-~~~~-~~~~~~a~~~~~~~~~-~y-------~~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~ 86 (346)
T TIGR01141 18 GKEVIKLNSNEN-PFGP-PPKAKEALRAEADKLH-RY-------PDPD-PAELKQALADYYGVDPEQILLGNGSDEIIEL 86 (346)
T ss_pred CCceEEccCCCC-CCCC-CHHHHHHHHHhHHHhh-cC-------CCCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHH
Confidence 357999987664 4553 4789999988765421 11 1111 27899999999985 466778777755 477
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++.++|+.|+++.++|..+...+...|++++.++.+ |++++++.+.. ++.+|++..+++
T Consensus 87 ~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-------------~~~~v~l~~p~N 153 (346)
T TIGR01141 87 LIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDD-------------KPKLVFLCSPNN 153 (346)
T ss_pred HHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCC-------------CCCEEEEeCCCC
Confidence 788888999999999999988877788889998888653 66777765422 334555567789
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 252 MEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
++|...+++++.++|+.+ ++++|+||+|+ .+...+... +.....+ .+|+++|+||++|.+| ||+++++++
T Consensus 154 ptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~--~~~~~~~~~-~~~~~~~--~~i~~~S~sK~~g~~G~r~G~~~~~~~~ 228 (346)
T TIGR01141 154 PTGNLLSRSDIEAVLERTPEDALVVVDEAYG--EFSGEPSTL-PLLAEYP--NLIVLRTLSKAFGLAGLRIGYAIANAEI 228 (346)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEECchh--hhcCCccHH-HHHhhCC--CEEEEehhhHhhhchhhhceeeecCHHH
Confidence 999999999999999987 99999999998 554432221 1222112 2688899999998778 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEe
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIML 405 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~ 405 (489)
++.++..... ++ .+++.++++.+.++.. .+.++.+++++++.+++++.|+++ |+.+.+ ..++++++.+
T Consensus 229 ~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~ 297 (346)
T TIGR01141 229 IDALNKVRAP--FN--LSRLAQAAAIAALRDD------DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRF 297 (346)
T ss_pred HHHHHhccCC--CC--CCHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEec
Confidence 9988765432 33 6777777777766532 145677888999999999999988 887654 3567777776
Q ss_pred CCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 406 YNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
.. ...++.++|.++||.+.+...... . .+++|++++ +++|+++++++|+
T Consensus 298 ~~--~~~~~~~~L~~~gI~v~~g~~f~~-~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 298 PR--DADALFEALLEKGIIVRDLNSYPG-L-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CC--CHHHHHHHHHHCCeEEEeCCCcCC-C-CCeEEEecC---CHHHHHHHHHHhC
Confidence 54 578899999999999997432211 1 578999974 8999999998863
No 139
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.6e-26 Score=231.53 Aligned_cols=334 Identities=14% Similarity=0.177 Sum_probs=235.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC----CC-EEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK----PA-AIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~-~i~~~s 169 (489)
|++++||++++. .+.. ++.+.+++.+.+.... ...+ ...|. .+|++.+|+++ |. ++ .|++++
T Consensus 43 ~~~~i~L~~g~p-~~~~-~~~~~~~l~~~~~~~~--~~~Y-~~~G~----~~lr~aia~~~~~~~g~~~~~~~~~I~it~ 113 (410)
T PRK06290 43 DMELIDMGVGEP-DEMA-DESVVEVLCEEAKKPE--NRGY-ADNGI----QEFKEAAARYMEKVFGVKDIDPVTEVIHSI 113 (410)
T ss_pred CCCeEEcCCCCC-CCCC-CHHHHHHHHHHHhCCC--CCCC-CCCCc----HHHHHHHHHHHHHHcCCCcCCCcceEEEcc
Confidence 677899875542 2222 3556666666553211 1111 11244 67888888875 32 23 688999
Q ss_pred cHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|++.. ..++.++.++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. ..+
T Consensus 114 Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~------------~~k 181 (410)
T PRK06290 114 GSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE------------KAK 181 (410)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc------------cce
Confidence 98776 77888889999999999999999988899999999888754 55666665542 244
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G 317 (489)
+++++ +.+|++|.+.+ +++|+++|++||++||+||+|. .+...++.. ....+. ..+.+|+++||||.+|.+|
T Consensus 182 ~i~l~-nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~--~~~~~~~~~-s~~~~~~~~~~~I~i~SfSK~~g~~G 257 (410)
T PRK06290 182 LLYLN-YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA--ALTFDGKPL-SFLSVPGAKEVGVEIHSLSKAYNMTG 257 (410)
T ss_pred EEEEE-CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh--hceeCCCCc-ChhcCCCccccEEEEeechhhcCCch
Confidence 45554 56899999977 6889999999999999999999 443333221 111121 1244799999999999889
Q ss_pred ---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 046230 318 ---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG 394 (489)
Q Consensus 318 ---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~ 394 (489)
||+++++++++.+......+..+ .+.+.+.++..+|+. ....++.+++++++.+++.+.|++.|+.+..
T Consensus 258 lRiG~ii~~~~l~~~l~~~~~~~~~~--~~~~~q~aa~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 329 (410)
T PRK06290 258 WRLAFVVGNELIVKAFATVKDNNDSG--QFIAIQKAGIYALDH------PEITEKIREKYSRRLDKLVKILNEVGFKAEM 329 (410)
T ss_pred hheEeEEeCHHHHHHHHHHHhccccC--CcHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHHHHHHHhCCCeecC
Confidence 99999999999887665433222 444556666666542 1246778888999999999999999988776
Q ss_pred CCCCCeEEEEeCCC-------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeec-CCCCHHHHHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLYNP-------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICIS-ASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 395 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~~ 466 (489)
+.++.++++.+... ....+++++|+++|+.+...+. . ..+++||+++ ...++++.++++++|++.+.+
T Consensus 330 p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~---~-~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 330 PGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWD---D-AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred CCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCc---c-ccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 66777777776543 2567899999999654442111 1 1368999985 346889999999999999887
Q ss_pred hCC
Q 046230 467 VGI 469 (489)
Q Consensus 467 ~~~ 469 (489)
+..
T Consensus 406 ~~~ 408 (410)
T PRK06290 406 VEF 408 (410)
T ss_pred ccc
Confidence 643
No 140
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=5.9e-26 Score=230.65 Aligned_cols=334 Identities=16% Similarity=0.180 Sum_probs=227.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCcc-HHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMG-YVT 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG-~~a 173 (489)
...+|||+.+.. .++. ++.+.+++.+.+.+ + ...+....|..++.+.+++.++++.|.+ +.+++++| +++
T Consensus 28 ~~~~i~l~~g~p-~~~~-~~~~~~~~~~~~~~-~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAP-NFAP-DPALVEGVARAMRD-G--HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCC-CCCC-CHHHHHHHHHHHHh-C--CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 345788875432 2332 46778887776654 1 1122223355555566666666666752 34555555 555
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
...++.+++.+||.|+++.++|..+...++..|++++.++.+ |+++|++.++. +.+ +|++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~------------~~~-~v~i~ 169 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP------------RTR-MIIVN 169 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc------------ccE-EEEEc
Confidence 578888889999999999999999888888899998888754 56677666542 234 44555
Q ss_pred CcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc---eEE
Q 046230 248 GIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG---GYI 320 (489)
Q Consensus 248 ~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G---G~i 320 (489)
+.++++|.+. .+++|+++|++||+++|+||+|. .+...+.......... ..+..|+++||||.||.+| ||+
T Consensus 170 ~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~ 247 (384)
T PRK12414 170 TPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE--HVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYC 247 (384)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh--hccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEE
Confidence 7889999874 48899999999999999999998 5443332111111111 1223589999999999879 999
Q ss_pred EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCe
Q 046230 321 AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPV 400 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~ 400 (489)
++++++++.+........++ .+.+.+.++.+.|+- .....+.++.++++.+.+.+.|++.|+.+..+.++.+
T Consensus 248 v~~~~l~~~l~~~~~~~~~~--~s~~~q~a~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~ 319 (384)
T PRK12414 248 LAPAELMDEIRKVHQFMVFS--ADTPMQHAFAEALAE------PASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFF 319 (384)
T ss_pred ecCHHHHHHHHHHHhheecC--CCcHHHHHHHHHhcC------ChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceE
Confidence 99999999887765433333 566666666665531 1123456778899999999999999988777767777
Q ss_pred EEEEeCC--CCcHHHHHH-HHhhCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 401 MPIMLYN--PAKIPAFSR-ECLRQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 401 ~~~~~~~--~~~~~~~~~-~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
+++.+.. .....++.. .|.++||.+.+.. |...+...+++||+++ .+++++++++++|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 320 MLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred EEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 6665542 223456664 4556799999843 3222223579999996 479999999998864
No 141
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.4e-26 Score=232.75 Aligned_cols=330 Identities=17% Similarity=0.168 Sum_probs=222.2
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP 179 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~ 179 (489)
.+++||+|+... .+ ++.+.+++.+. ..+... .+..+...+|++.+|++++.+..+++++|++++..++.
T Consensus 5 ~~~~~~~~~~~~-~~--~~~~~~a~~~~--~~~~~~------~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 5 SRVVDLRSDTVT-KP--TDAMRAAMANA--EVDDDV------LGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhhccccc-CC--CHHHHHHHHhc--cCCCcc------cCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHH
Confidence 367888866544 23 35666665442 111111 12244568999999999999888889999999877777
Q ss_pred hhcC-CCCEEEEcCCCchHHHH---HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 180 VLMR-KGSLIISDSLNHNSIVN---GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 180 al~~-~g~~Vl~~~~~h~~~~~---~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
++.. +||.|+++.++|.+... .+...|++++.++.+ |++++++.+++....+. + ++.+|++++++
T Consensus 74 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~-----~-~~~~v~l~~~~ 147 (353)
T PLN02721 74 VHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHF-----P-TTRLICLENTH 147 (353)
T ss_pred HHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCC-----C-cceEEEEeccc
Confidence 7776 99999999999976665 356678888888754 78899988874311111 1 33456666654
Q ss_pred -CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcce-EEEeCHH
Q 046230 251 -SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGG-YIAGSKE 325 (489)
Q Consensus 251 -s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG-~i~~~~~ 325 (489)
+++|...+ +++|.++|++||++||+||+|..+.+...+.... +. ...+|.++.|+||+++++.| +++++++
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~---~~-~~~~d~~~~s~sK~l~~~~G~~~~~~~~ 223 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVH---RL-VKAADSVSVCLSKGLGAPVGSVIVGSKS 223 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHH---HH-hhhCCEEEEecccccCCceeeEEecCHH
Confidence 55777655 7899999999999999999987554322222111 11 02347777899999986544 5778899
Q ss_pred HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee-eCCCCCCeEEE
Q 046230 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV-LGDNDSPVMPI 403 (489)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v-~~~~~~~~~~~ 403 (489)
+++.+......+..+....+..+++++.+++.. .+.+++..++.+++.+.|+++ ++.+ .....++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 294 (353)
T PLN02721 224 FIRKAKRLRKTLGGGMRQVGVLAAAALVALQEN---------VPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYF 294 (353)
T ss_pred HHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEE
Confidence 888765443221111111122333344444432 223444567788999999988 6754 34445666666
Q ss_pred EeCCC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 404 MLYNP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 404 ~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+... .....+++.|.++||.+.+ ...+++|++++..++++|+++++++|++++..
T Consensus 295 ~~~~~~~~~~~~~~~~L~~~gi~v~~-------~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 295 DITDGSRITAEKLCKSLEEHGVLLMP-------GNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EccCCccccHHHHHHHHHhCCcEEec-------CCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 66432 3567899999999999984 34568999998899999999999999987653
No 142
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=8.9e-26 Score=227.63 Aligned_cols=320 Identities=18% Similarity=0.256 Sum_probs=226.3
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCC-----cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGG-----TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISD 191 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~ 191 (489)
+..+.+++.+++.+|+.++++++...+ ..+...++++++|+++|.++.+++++|++++..++.++.++|+.|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~ 89 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVD 89 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 356888999999999876666544222 246678999999999999666656666778888888899999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHH
Q 046230 192 SLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264 (489)
Q Consensus 192 ~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~ 264 (489)
.+.|.+....++..|++++.++.+ |++++++.+++...+. . .+..+|++.++.+++|.+.++++|.+
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-----~-~~~~lv~l~~p~n~tG~~~~~~~i~~ 163 (361)
T cd06452 90 GLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEF-----G-KPPALALLTHVDGNYGNLHDAKKIAK 163 (361)
T ss_pred CCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhcc-----C-CCceEEEEECCCCCCeeeccHHHHHH
Confidence 999999888888899999887643 6788888886532110 0 13345666677888999999999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhCCCc-----
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCPAH----- 337 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~~~~----- 337 (489)
+|+++|+++|+||+|++|.+...+. . .++|++++|++|++++++ |++++++++++.+......+
T Consensus 164 ~~~~~~~~vivD~a~~~g~~~~~~~------~---~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~ 234 (361)
T cd06452 164 VCHEYGVPLLLNGAYTVGRMPVSGK------E---LGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEV 234 (361)
T ss_pred HHHHcCCeEEEECCcccCCcCCCHH------H---cCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccccccccee
Confidence 9999999999999998654322211 1 134899999999997544 99999999999886644321
Q ss_pred -ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCC------
Q 046230 338 -LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYN------ 407 (489)
Q Consensus 338 -~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~------ 407 (489)
..+.+.++..+++++++++.+. +.-+...+..++.+++++.|+++ |+.+.. +...+++.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~ 308 (361)
T cd06452 235 ELLGCTLRGAPLVTLMASFPHVK------ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAK 308 (361)
T ss_pred eeeccccCchHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhh
Confidence 1112233334555566666542 22233444455668999999999 888863 2334555544431
Q ss_pred --CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 408 --PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 408 --~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.....++.+.|+++||.+.. +.....+|++. ..+|++|++.++++|+++.
T Consensus 309 ~~~~~~~~~~~~L~~~gI~~~~------~~~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 309 KHKRRGYFLYSELKKRGIHGIK------PGLTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hccccchhHHHHHHHcCceEEc------CCCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 11123689999999998541 12235788887 3489999999999998654
No 143
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=2.9e-26 Score=234.70 Aligned_cols=336 Identities=22% Similarity=0.243 Sum_probs=232.6
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHH-HHhCCCCCCcccCCCcchhHHHH----HHHHHHHhCCCCE-EEeCccHH
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESL-KKYSPSTCSSRVDGGTLMVHNEL----EECVARFVGKPAA-IVFGMGYV 172 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~ 172 (489)
+++||| .|.+++ +|.+.+++.+.+ .+|+.+..+++...|. +...++ ++.+++++|.+.. +++++|++
T Consensus 19 ~~~~~~~~~~~~~-----~~~v~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~ 92 (402)
T cd00378 19 RETLELIASENFT-----SPAVMEAMGSDLTNKYAEGYPGKRYYGGC-EYVDEIEDLAIERAKKLFGAEYANVQPHSGSQ 92 (402)
T ss_pred HhCeeeeccCCcC-----CHHHHHHhcccccccccCCCCCCcccCCc-hHHHHHHHHHHHHHHHHhCCCceeeecCCcHH
Confidence 668888 555655 578888888766 4576666555554443 222333 3457788998755 55578999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHHHH-----HHhcCCeEEEe--cCC------CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIVNG-----ARGSGATIRVF--QHN------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~~~-----~~~~g~~~~~~--~~~------d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
++..++.++.++||.|+++.+.|+++... +...|+.+..+ +.+ |++++++.+... +
T Consensus 93 a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----------~ 161 (402)
T cd00378 93 ANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----------K 161 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----------C
Confidence 99999999999999999999998765432 44556654443 333 788998888641 3
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcce
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGG 318 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG 318 (489)
.++++++.+.+ |...++++|.++|++||+++|+||+|..|..+ .|.... .+. .+|++++|++|+| |+.||
T Consensus 162 ~~~v~~~~~~~---~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~-~g~~~~-~~~----~~dv~~~s~sK~l~G~~gg 232 (402)
T cd00378 162 PKLIVAGASAY---PRPIDFKRFREIADEVGAYLLVDMAHVAGLVA-GGVFPN-PLP----GADVVTTTTHKTLRGPRGG 232 (402)
T ss_pred CCEEEecCccc---CCCcCHHHHHHHHHhcCCEEEEEccchhhhhh-cccCCC-ccc----CCcEEEeccccCCCCCCce
Confidence 45555555533 45679999999999999999999998654332 221111 111 3489999999999 55569
Q ss_pred EEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee-CCC
Q 046230 319 YIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL-GDN 396 (489)
Q Consensus 319 ~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~-~~~ 396 (489)
++++++ ++++.+........+++ .++...+++..++..+.. ...++.++++.++.+++.+.|++.|+.+. .+.
T Consensus 233 ~i~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 307 (402)
T cd00378 233 LILTRKGELAKKINSAVFPGLQGG-PHLHVIAAKAVALKEALE----PEFKAYAKQVVENAKALAEALKERGFKVVSGGT 307 (402)
T ss_pred EEEeccHHHHHHHHHHhCccccCC-chHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCC
Confidence 988876 89888876554433332 223333333344443311 14467788899999999999999998875 345
Q ss_pred CCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCCcC---CCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPATP---LLLARARICISA----SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 397 ~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~~~---~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~ 466 (489)
+++++++.+... .....+.+.|.++||.+.+..+|..+ ...+.+|++++. .++++|++++++.|.+++++
T Consensus 308 ~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 308 DNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 678888877632 34566777788889999986667663 245789999875 35799999999999987754
No 144
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=1.2e-25 Score=229.41 Aligned_cols=340 Identities=18% Similarity=0.230 Sum_probs=239.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
|++++||++++..... ++.+.+++.+.+.... ...+....|. .+|++.+++++ |. ++ .+++++|
T Consensus 28 ~~~~i~l~~g~p~~~~--~~~~~~~~~~~~~~~~--~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~i~~t~G 99 (395)
T PRK08175 28 GEDIIDFSMGNPDGPT--PPHIVEKLCEVAQRPD--THGYSTSRGI----PRLRRAISRWYQDRYDVDIDPESEAIVTIG 99 (395)
T ss_pred CCCeEEcCCCCCCCCC--CHHHHHHHHHHHhCCC--cCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 5678999755433322 3456777766654311 1111112233 67888888875 32 24 6888888
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
++.. ..++.+++++|+.|+++.|+|..+...++..|++++.++.+ +.++++++++.. .+..+ +|+
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~---------~~~~~-~v~ 169 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRES---------YPKPK-MMI 169 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhc---------cCCce-EEE
Confidence 8665 67777888999999999999999888888899998888664 467788777641 01233 455
Q ss_pred EcCcCCCCCCCCCh---HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc---e
Q 046230 246 VEGIYSMEGELCKF---PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 246 ve~v~s~~G~~~~l---~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G---G 318 (489)
+.++++++|...+. ++|+++|++||+++|+||+|. .+-..+........+.. .+..|+++||||.||.+| |
T Consensus 170 i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~--~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG 247 (395)
T PRK08175 170 LGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA--DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH--hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhe
Confidence 55778999988775 899999999999999999998 55444432222222221 233577899999999878 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.+........++ .+.+.+.++.++|+. ...+.+..++.++++.+++.+.|+++|+.+..+.++
T Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g 320 (395)
T PRK08175 248 FMVGNPELVSALARIKSYHDYG--TFTPLQVAAIAALEG-----DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKAS 320 (395)
T ss_pred eeeCCHHHHHHHHHHHhhcccC--CCcHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEE
Confidence 9999999999887654432233 455556666666542 122466778888999999999999998877666678
Q ss_pred CeEEEEeCCCC---cHHHHHHHHh-hCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 399 PVMPIMLYNPA---KIPAFSRECL-RQNVAVVTV-AFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 399 ~~~~~~~~~~~---~~~~~~~~l~-~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
+++++.+.... ...+++++++ ++||.+.+. .|+ +.+.+++||++. .+++.+++++++|.+++++.+.
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~--~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~~~ 392 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG--DYGDTHVRFALI--ENRDRIRQAIRGIKAMFRADGL 392 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC--cCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhcCC
Confidence 88888886543 3578888776 569999973 332 234578999984 6899999999999999987653
No 145
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=6.4e-26 Score=231.99 Aligned_cols=324 Identities=14% Similarity=0.160 Sum_probs=232.2
Q ss_pred CccchHHHHHHHHHhCCCC--CCcccCCCcchhHHHHHHHHHHHhCC--CCEEEeCccH-HHHHHhHhhh----cCCCCE
Q 046230 117 DEYCTPRVIESLKKYSPST--CSSRVDGGTLMVHNELEECVARFVGK--PAAIVFGMGY-VTNSAILPVL----MRKGSL 187 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~-~a~~~~~~al----~~~g~~ 187 (489)
++.+.+++.+.++.+.... +.........+..+++++.+|+++|. ++.|++++|+ +++..++.++ .++|+.
T Consensus 32 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~ 111 (401)
T PRK10874 32 PQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDE 111 (401)
T ss_pred CHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCE
Confidence 5678888888876642111 11111111245567899999999997 3677776665 4456677776 368999
Q ss_pred EEEcCCCchHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 188 IISDSLNHNSIV----NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 188 Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
|++..+.|++.. ..++..|++++.++.+ |++++++.+.. ++.+|++..+.+++|.+.|
T Consensus 112 vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~t~lv~i~~~~n~tG~~~~ 178 (401)
T PRK10874 112 IIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP-------------RTRILALGQMSNVTGGCPD 178 (401)
T ss_pred EEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc-------------CcEEEEEeCCcccccCcCC
Confidence 999999998743 3346679998887654 67788777743 3446777888999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCC--
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCP-- 335 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~-- 335 (489)
+++|.++|+++|+++++|++|++|.+. .++...++|+++.|++|.+|+.| |+++.++++++.+.....
T Consensus 179 ~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~ 249 (401)
T PRK10874 179 LARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGG 249 (401)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCC
Confidence 999999999999999999999865431 12222345999999999999888 999999998876643210
Q ss_pred ----------------Ccccc-cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC
Q 046230 336 ----------------AHLYA-TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND 397 (489)
Q Consensus 336 ----------------~~~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~ 397 (489)
...+. .+.|.+..+++.++++.+... ...+..++..++.+++++.|+++ |+.+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~----g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~ 325 (401)
T PRK10874 250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADI----DINQAESWSRSLATLAEDALAKLPGFRSFRCQD 325 (401)
T ss_pred cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Confidence 01111 134555777777788876321 33456788888899999999988 888776666
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++++.+.+. .....++.+.|.++||.+.+...++.+ ...+.+|+++...+|++|+|+++++|+++++.+
T Consensus 326 ~~i~~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 326 SSLLAFDFA-GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CcEEEEEEC-CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 777766654 334578889999999999864433211 124689999999999999999999999988754
No 146
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.9e-26 Score=230.78 Aligned_cols=332 Identities=19% Similarity=0.211 Sum_probs=235.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEeCcc-
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVFGMG- 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG- 170 (489)
+.+.+||+.++. .++. ++.+.+++.+.+.+.... ++......+|++.+|+++ +. ++.+++++|
T Consensus 30 ~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 100 (393)
T PRK05764 30 GRDVISLGAGEP-DFDT-PEHIKEAAIEALDDGKTK-------YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGA 100 (393)
T ss_pred cCCEEEeCCCCC-CCCC-CHHHHHHHHHHHhcCCCC-------cCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCc
Confidence 456888875543 2332 467777777777642111 122223377888888886 32 245666665
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.+++.+|+.|+++.++|..+...++..|++++.++.+ |++++++.++. ..+ +
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------------~~~-~ 167 (393)
T PRK05764 101 KQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP------------KTK-A 167 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc------------cce-E
Confidence 566678888889999999999999999988889999999988764 45777776643 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC---ccccccCCCCCCccEEEcccccccCCcc
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR---GVCELLEVDTADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~---~~~~~~~v~p~~~Di~~~t~sK~~g~~G 317 (489)
|++.+..+++|.+.+ +++|+++|++||+++|+||+|. .+...+. ...+. ..+..+.+|+++||||.+|.+|
T Consensus 168 v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~G 244 (393)
T PRK05764 168 LILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE--KLVYDGAEFTSIASL-SPELRDRTITVNGFSKAYAMTG 244 (393)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc--ceeeCCCCcccHHHc-CCCCcCCEEEEecCcccccCcc
Confidence 455566889998865 8899999999999999999998 4433332 12211 1111234799999999999778
Q ss_pred ---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 046230 318 ---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL 393 (489)
Q Consensus 318 ---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~ 393 (489)
||+++++++++.+....... ....+++.+.++.+.|+. .....++.+++++++.+.+++.|+++ |+.+.
T Consensus 245 ~RiG~i~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 317 (393)
T PRK05764 245 WRLGYAAGPKELIKAMSKLQSHS--TSNPTSIAQYAAVAALNG-----PQDEVEEMRQAFEERRDLMVDGLNEIPGLECP 317 (393)
T ss_pred ceeEEEecCHHHHHHHHHHHhhc--ccCCChHHHHHHHHHHcC-----ChHHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 99999999999887655432 234777777777777651 12255677888899999999999998 88877
Q ss_pred CCCCCCeEEEEeCCCC-----cHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 394 GDNDSPVMPIMLYNPA-----KIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.++.++++.+.... ...++.+.|++ +||.+.+...... .+++||++ .++++++++++++|.+++++.
T Consensus 318 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~vRis~--~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 318 KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA---PGYVRLSY--ATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred CCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC---CCEEEEEe--cCCHHHHHHHHHHHHHHHHhh
Confidence 6666666666665432 23688888765 6999987332211 57899998 468999999999999988643
No 147
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=9.5e-26 Score=229.70 Aligned_cols=336 Identities=18% Similarity=0.183 Sum_probs=232.8
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--------CCEEEeCccH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--------PAAIVFGMGY 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~sG~ 171 (489)
..+|||+.++. .++. ++.+.+++.+.+.... ..+....|. .++++.++++++. ++.+++++|+
T Consensus 30 ~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~~~---~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEP-DFTT-PDHVKEAAKRAIDANQ---SHYTGMAGL----LELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCC-CCCC-CHHHHHHHHHHHhcCC---CCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 45899874432 2222 3566777777665311 111112233 6788888887642 3567776665
Q ss_pred -HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 -VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 -~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
+++..++.++.++|+.|++..+.|+.+...++..|++++.++.+ |+++|+++++.. +.+..++
T Consensus 101 ~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~----------~~~~~~i 170 (391)
T PRK07309 101 TEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQ----------GDKLKAV 170 (391)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhcc----------CCCeEEE
Confidence 55577888888999999999999999988889999998888653 567888777541 1123344
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---e
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
++..++|++|...+ +++|+++|++||+++|+||+|. .+-..|..........+ +..|+++||||.||.+| |
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~--~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS--ELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIG 247 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc--ceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccceeE
Confidence 44556889998765 8999999999999999999999 55443322111222233 23589999999999779 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.+....... ..+.+++.+.++.+.|+. +..+....+++++++.+++.+.|++.|+.+..+.++
T Consensus 248 ~~v~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg 320 (391)
T PRK07309 248 LIFAPAEFTAQLIKSHQYL--VTAATTMAQFAAVEALTN-----GKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGA 320 (391)
T ss_pred EEEeCHHHHHHHHHHHhhc--ccCCChHHHHHHHHHHhC-----ChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 9999999999887654321 123566666666666542 111345567788889999999999999887766667
Q ss_pred CeEEEEeCCC--CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIMLYNP--AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++++.+... ....++.++++ ++||.+.+.... .+.+.+++|++++ .+.+++++++++|.++++++
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAF-GPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 7667666532 24567887655 579999874322 2334689999996 47899999999999988664
No 148
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=7.8e-26 Score=233.31 Aligned_cols=292 Identities=13% Similarity=0.127 Sum_probs=222.1
Q ss_pred HHHHHHHHHHHhCC----CCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHH
Q 046230 148 HNELEECVARFVGK----PAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPS 218 (489)
Q Consensus 148 ~~~l~~~la~~~g~----~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~ 218 (489)
..+|++.++++++. ++.|++++|+... ..++.+++++||.|+++.|+|..+...++..|++++.++.+ |++
T Consensus 123 ~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~ 202 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPE 202 (431)
T ss_pred CHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHH
Confidence 36788899998763 4578888887665 78888899999999999999999999999999999988764 677
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh---HHHHHHHHHc-CcEEEEEcccccccccCCCCccccc
Q 046230 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF---PEIIAICKKY-KAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 219 ~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l---~~i~~l~~~~-~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
+|+++++. ..++++++.+.+||+|...+. ++|.++|+++ +++||+||+|. .|...+.. ..
T Consensus 203 ~l~~~~~~------------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~--~~~~~~~~--~~ 266 (431)
T PRK15481 203 KLERALAQ------------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFA--LLSSSPYH--SV 266 (431)
T ss_pred HHHHHHhc------------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchh--hhccCCCC--CC
Confidence 88877754 356667667899999999885 5999999999 99999999998 55433221 11
Q ss_pred cCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL 371 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~ 371 (489)
...+. +..|+++||||.|| +| ||+++++++++.+........+ +.|.+.+.++.++|+-- ....+.++.+
T Consensus 267 ~~~~~-~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~---~~~~~l~~~~ 339 (431)
T PRK15481 267 IPQTT-QRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQ--WVSHLLQDLVYACLTDP---EYQARLAQAR 339 (431)
T ss_pred CcCCC-CCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcccc--CCCHHHHHHHHHHHhCc---cHHHHHHHHH
Confidence 11121 23589999999999 69 9999999999988654433222 36777777777777521 0011356778
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHH
Q 046230 372 ARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKE 451 (489)
Q Consensus 372 ~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~e 451 (489)
+.++++.+.+.+.|++.|+.+..+.+++++++.+.. ...++.+.|.++||.+.+......+...+++||+++ ..+++
T Consensus 340 ~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~-~~~~~ 416 (431)
T PRK15481 340 LFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLS-TLNDA 416 (431)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcC-CCChH
Confidence 889999999999999988876566678777777653 457899999999999998332222223468999995 46799
Q ss_pred HHHHHHHHHHHHHH
Q 046230 452 DLIKALEVISRVGD 465 (489)
Q Consensus 452 did~~l~~l~~~~~ 465 (489)
++++++++|.+++.
T Consensus 417 ~i~~~~~~l~~~~~ 430 (431)
T PRK15481 417 EINRLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 149
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=6.9e-26 Score=230.57 Aligned_cols=332 Identities=16% Similarity=0.156 Sum_probs=231.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~sG~ 171 (489)
|..+++|+.+.. +++. ++.+.+++.+.+...... +....|. .++++.+|++++ .++.+++++|+
T Consensus 31 ~~~~i~l~~g~~-~~~~-~~~v~~a~~~~~~~~~~~---Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 101 (387)
T PRK08960 31 GHDVIHLEIGEP-DFTT-AEPIVAAGQAALAAGHTR---YTAARGL----PALREAIAGFYAQRYGVDVDPERILVTPGG 101 (387)
T ss_pred CCCeEEeCCCCC-CCCC-CHHHHHHHHHHHhcCCCc---cCCCCCC----HHHHHHHHHHHHHHhCCCCChhhEEEccCc
Confidence 456888864432 3332 467888888877642111 1112233 778888888863 24667777665
Q ss_pred HH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+. ...++.++.++||.|+++.|.|..+...+...|++++.++.+ |++++++.+++ +.+ +
T Consensus 102 ~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~~-~ 168 (387)
T PRK08960 102 SGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA------------DTV-G 168 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc------------cce-E
Confidence 54 577888889999999999999999998888889988777642 56677776643 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
+++...++++|...+ +++|+++|++||+++|+||+|. .+-..+.. .......+ ..|+++||||.+|.+|
T Consensus 169 i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~--~~~~~~~~-~~~~~~~~--~vi~~~S~SK~~g~~GlRi 243 (387)
T PRK08960 169 ALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH--GLTYGVDA-ASVLEVDD--DAFVLNSFSKYFGMTGWRL 243 (387)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCC-CChhhccC--CEEEEeecccccCCcccEE
Confidence 445556899999877 5678888999999999999998 55433221 12233332 2588899999999879
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-eCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV-LGDN 396 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v-~~~~ 396 (489)
||+++++++++.+......+..+ .+.+.+.++.+.|+- .......+.++.++++.+.+.+.|++.|+.+ ..+.
T Consensus 244 G~~~~~~~~~~~~~~~~~~~~~~--~s~~~q~a~~~~l~~----~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 244 GWLVAPPAAVPELEKLAQNLYIS--ASTPAQHAALACFEP----ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred EEEEcCHHHHHHHHHHHhhhccC--CCHHHHHHHHHHhhc----CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 99999999999887655433333 677777777776641 0122566778888999999999999988764 2355
Q ss_pred CCCeEEEEeCC-CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYN-PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+++++++.+.. .....+++++|+ ++||.+.|......+...+++|++++. +.+++..++++|.++++
T Consensus 318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 67776776654 345678888876 469999984332222345799999963 68888888888877653
No 150
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.2e-25 Score=227.98 Aligned_cols=342 Identities=19% Similarity=0.201 Sum_probs=232.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
+..++||+.++.... .++.+.+++.+.+... ....+....|. .+|++.+|+++ +. ++ .|++++|
T Consensus 32 ~~~~~~l~~g~p~~~--~~~~~~~~~~~~~~~~--~~~~Y~~~~G~----~~lR~~ia~~l~~~~~~~~~~~~~I~it~G 103 (403)
T PRK08636 32 GEDIIDFSMGNPDGP--TPQHIIDKLCESAQKP--KTHGYSVSKGI----YKLRLAICNWYKRKYNVDLDPETEVVATMG 103 (403)
T ss_pred CCCEEEcCCcCCCCC--CCHHHHHHHHHHhcCC--ccCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 567899875432211 1344566665554321 11111112234 67777777776 42 24 6888888
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++.. ..++.+++++||.|++++|+|..+...+...|++++.++.+ |++++.+.+++...+.. + +..
T Consensus 104 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~-----~-~~~ 177 (403)
T PRK08636 104 SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS-----P-KPK 177 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc-----C-Cce
Confidence 7776 78889999999999999999999999999999999887642 45555444444332211 1 233
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
++++...++++|.+.+ +++|+++|++|+++||+||+|. .+-..+........++. .+..|+++||||.||.+|
T Consensus 178 ~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~--~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 178 YVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA--DITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccch--hhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 4555566899998866 6899999999999999999998 55444432222233322 233466899999999889
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........++ .+.+.+.++..+++- .....++.++.++++.+.+.+.|++.|+.+..+
T Consensus 256 RiG~iv~~~~li~~~~~~~~~~~~~--~~~~~q~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 328 (403)
T PRK08636 256 RVGFVVGNKKLVGALKKIKSWLDYG--MFTPIQVAATIALDG-----DQSCVEEIRETYRKRRDVLIESFANAGWELQKP 328 (403)
T ss_pred eeeeeeCCHHHHHHHHHHHHHhccc--CChHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999999999887654322222 444444444443321 123566778888999999999999988877667
Q ss_pred CCCCeEEEEeCCCC---cHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPA---KIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 396 ~~~~~~~~~~~~~~---~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+++++++.+.... ...++.+.++ ++||.+.|.... ...+.+++||+++ .+++++++++++|.++++.
T Consensus 329 ~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f-~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 329 RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF-GEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh-CcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 77888888876432 3567887766 569999974322 1234579999994 6899999999999998865
No 151
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=1.2e-25 Score=229.87 Aligned_cols=336 Identities=15% Similarity=0.190 Sum_probs=235.4
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCC--CCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccH-HHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPST--CSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGY-VTN 174 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~ 174 (489)
.-|+|-++ .+. .++.+.+++.+.+..+.... +......-..+...++++.+|+++|.+ +.+++++|+ +++
T Consensus 17 ~iyld~a~---~~~--~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l 91 (398)
T TIGR03392 17 TVYLDSAA---TAL--KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESI 91 (398)
T ss_pred eEEeeCcc---ccC--CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHH
Confidence 45666432 222 35678888888776532111 111100011345678999999999963 567766555 555
Q ss_pred HHhHhhh----cCCCCEEEEcCCCchHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 175 SAILPVL----MRKGSLIISDSLNHNSIV----NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 175 ~~~~~al----~~~g~~Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
..++.++ .++|+.|++..+.|++.. ..++..|++++.++.+ |++++++++.+ ++
T Consensus 92 ~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-------------~t 158 (398)
T TIGR03392 92 NLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP-------------RT 158 (398)
T ss_pred HHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc-------------Cc
Confidence 6666666 478999999999998742 3346679998888754 67788877753 34
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i 320 (489)
.+|++..+++++|.+.|+++|.++|+++|+++++|++|++|.+- .++...++|+++.|++|.+|+.| |++
T Consensus 159 ~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l 229 (398)
T TIGR03392 159 RILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGVL 229 (398)
T ss_pred eEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEEE
Confidence 46677889999999999999999999999999999999855321 12222245899888889999878 999
Q ss_pred EeCHHHHHHHHhhCCC------------------ccc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHH
Q 046230 321 AGSKELIQYLKYTCPA------------------HLY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~------------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (489)
+.++++++.+.....+ ..+ ..+.+.+..+++.++++.+... ..++..++..++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~----g~~~i~~~~~~l~~~l 305 (398)
T TIGR03392 230 YGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI----DIAAAEAWSVSLADLA 305 (398)
T ss_pred EEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHH
Confidence 9999888776432110 001 1135555777788888877321 3456778888899999
Q ss_pred HHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHH
Q 046230 382 RSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDLIK 455 (489)
Q Consensus 382 ~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~ 455 (489)
++.|+++ |+.+.+...++++.+.+. .....++.+.|.++||.+.....+..+ ...+.+|+++...+|++|+++
T Consensus 306 ~~~l~~l~g~~~~~~~~~~i~~~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~ 384 (398)
T TIGR03392 306 EERLAQLPGFRSFRCPGSSLLAFDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDA 384 (398)
T ss_pred HHHHhcCCCeEEeCCCCCcEEEEEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHH
Confidence 9999987 787776556677766654 344678999999999999864332211 113689999999999999999
Q ss_pred HHHHHHHHHHHh
Q 046230 456 ALEVISRVGDLV 467 (489)
Q Consensus 456 ~l~~l~~~~~~~ 467 (489)
++++|+++++.+
T Consensus 385 l~~~l~~~~~~~ 396 (398)
T TIGR03392 385 LVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 152
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.1e-25 Score=221.29 Aligned_cols=318 Identities=21% Similarity=0.259 Sum_probs=248.6
Q ss_pred eeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-CC-CEEEeCccHHHH-HH
Q 046230 101 RCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-KP-AAIVFGMGYVTN-SA 176 (489)
Q Consensus 101 ~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~-~~i~~~sG~~a~-~~ 176 (489)
..+||++| |.+|.+ |.+.+++.+.+..+.... .....++++.++++.+ .+ +.|+.+.|+... ..
T Consensus 23 ~~i~LssNenP~gp~---~~~~~~~~~~~~~~~rYP---------d~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~ 90 (356)
T COG0079 23 GIIKLSSNENPYGPP---PKVIEAIRAALDKLNRYP---------DPDYRELRAALAEYYGVVDPENVLVGNGSDELIEL 90 (356)
T ss_pred cceeecCCCCCCCCC---HHHHHHHHHHHHhhccCC---------CCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHH
Confidence 58999877 777766 678888888776432211 1134799999999999 54 678889999887 88
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
++++++.+||.|++..|+|+.+...++..|++++.++.. |++++.+.+.+ +..+|++.+..|+
T Consensus 91 l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-------------~~~lv~i~nPNNP 157 (356)
T COG0079 91 LVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-------------KTKLVFLCNPNNP 157 (356)
T ss_pred HHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc-------------CCCEEEEeCCCCC
Confidence 899999999999999999999999999999999998874 55666655543 2335666778899
Q ss_pred CCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 253 EGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
+|...+.++|.++.+.. +.+||+||||. .|.. ........ .+.. -+++.||||+||.+| ||++++++++
T Consensus 158 TG~~~~~~~l~~l~~~~~~~~~vVvDEAY~--eF~~--~~~~~l~~-~~~n-livlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 158 TGTLLPREELRALLEALPEGGLVVIDEAYI--EFSP--ESSLELLK-YPPN-LIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEeCchh--hcCC--chhhhhcc-CCCC-EEEEEecHHhhhcchhceeeccCCHHHH
Confidence 99999988888887765 78999999999 7766 22222222 2322 388999999999999 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCe-eeCCCCCCeEEEEeC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFE-VLGDNDSPVMPIMLY 406 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-v~~~~~~~~~~~~~~ 406 (489)
+.++....+|. .|.++++++.++|+.- +..++.++++...++++.+.|+++|+. +.+. ..+++.+.+.
T Consensus 232 ~~l~~vr~p~~----v~~~a~~aa~aal~~~------~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS-~aNFvlv~~~ 300 (356)
T COG0079 232 AALNKVRPPFN----VSSPALAAAIAALRDA------DYLEESVERIREERERLYAALKALGLFGVFPS-QANFVLVRVP 300 (356)
T ss_pred HHHHHhcCCCC----CCHHHHHHHHHHcccH------HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-CCcEEEEECC
Confidence 99998887653 7788888888887632 367888899999999999999999854 5444 4676666666
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
... ...+.++|+++||+++.... .+...+++|+++ -|+++.++++++|.++++.
T Consensus 301 ~~~-~~~l~~~L~~~giivR~~~~--~~~~~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 301 DAE-AAALAEALLKKGILVRDCSS--VGLLPGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred Ccc-HHHHHHHHHHCCEEEEeCCC--CCCCCCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 534 66899999999999997543 234567999998 4788889999999988754
No 153
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=232.74 Aligned_cols=335 Identities=15% Similarity=0.137 Sum_probs=226.5
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCccHHHH-HHhHhhhc-CCCCEEE
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGMGYVTN-SAILPVLM-RKGSLII 189 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sG~~a~-~~~~~al~-~~g~~Vl 189 (489)
.+.+++.+.++..+.....+ +......+|++.+|+++.. ++.|++++|+... ..++.++. ++||.|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~Y----~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vl 167 (481)
T PTZ00377 92 DVVARAKEYLNAIGGGTGAY----TDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVM 167 (481)
T ss_pred HHHHHHHHHHHhCCCcccCc----CcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEE
Confidence 56667666665543222222 2233347888888888642 4678888887665 77778887 7999999
Q ss_pred EcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---h
Q 046230 190 SDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---F 259 (489)
Q Consensus 190 ~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l 259 (489)
++.|+|..+...++..|++++.++.+ |+++|++.+.....++ .+.++++++ +.+|++|.+.+ +
T Consensus 168 v~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~------~~~k~l~l~-~P~NPTG~~~s~e~~ 240 (481)
T PTZ00377 168 IPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNG------ITPRALVVI-NPGNPTGQVLTRDVM 240 (481)
T ss_pred ECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcC------CCeeEEEEE-CCCCCCCcCCCHHHH
Confidence 99999999999999999998887643 5788988886532211 123445555 66899999977 8
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCC-Cccccc----cCCCCC----CccEEEccccccc-CCcc---eEEEe---C
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTG-RGVCEL----LEVDTA----DVDIMMGTFTKSF-GSCG---GYIAG---S 323 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G-~~~~~~----~~v~p~----~~Di~~~t~sK~~-g~~G---G~i~~---~ 323 (489)
++|+++|++||++||+||+|. .+...+ ...... .++.+. ..-|+++||||++ +.+| ||+++ +
T Consensus 241 ~~i~~~a~~~~~~iI~De~Y~--~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p 318 (481)
T PTZ00377 241 EEIIKFCYEKGIVLMADEVYQ--ENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP 318 (481)
T ss_pred HHHHHHHHHCCCEEEEehhhH--hhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC
Confidence 999999999999999999998 554422 111111 122221 1237889999985 7678 99986 8
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCC-----CchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDG-----SSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND 397 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~ 397 (489)
+++++.+...... . .+.+++.+.++.++|+-...... ..+..+.+++++++.+.+.+.|+++ |+.+..+.+
T Consensus 319 ~~li~~l~~~~~~-~--~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~g 395 (481)
T PTZ00377 319 PEVREQIYKLASI-N--LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEG 395 (481)
T ss_pred HHHHHHHHHHhhe-e--cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCe
Confidence 9999988765532 1 23667777777776641100000 0022334455788889999999988 888877777
Q ss_pred CCeEEEEeCCCC------------cHHHHHHH-HhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 398 SPVMPIMLYNPA------------KIPAFSRE-CLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 398 ~~~~~~~~~~~~------------~~~~~~~~-l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++++++.+..+. ....++.. |.++||.+.|........+.+++|+++. .+++++++++++|.+++
T Consensus 396 g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 396 AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFH 473 (481)
T ss_pred eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH
Confidence 777665543221 12334444 4556999998433222234579999994 77899999999999999
Q ss_pred HHhCCcc
Q 046230 465 DLVGIKY 471 (489)
Q Consensus 465 ~~~~~~~ 471 (489)
+....||
T Consensus 474 ~~~~~~~ 480 (481)
T PTZ00377 474 ESFMKKY 480 (481)
T ss_pred HHHHHhh
Confidence 8876665
No 154
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=3.7e-26 Score=232.19 Aligned_cols=323 Identities=16% Similarity=0.237 Sum_probs=228.0
Q ss_pred CCccchHHHHHHHHHhCCCCCCcc-cCCCcchhHHHHHHHHHHHhCC-CCEEEeCcc-HHHHHHhHhhhc----CCCCEE
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSR-VDGGTLMVHNELEECVARFVGK-PAAIVFGMG-YVTNSAILPVLM----RKGSLI 188 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG-~~a~~~~~~al~----~~g~~V 188 (489)
-++.+.+++.+.++++.....+.. .........+++++.+|+++|. ++.+++++| ++++..++.++. ++++.|
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~v 91 (381)
T PRK02948 12 MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHI 91 (381)
T ss_pred CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEE
Confidence 367888998888876533222211 1111245678899999999985 567777666 666666666654 578999
Q ss_pred EEcCCCchHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH
Q 046230 189 ISDSLNHNSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP 260 (489)
Q Consensus 189 l~~~~~h~~~~~~---~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~ 260 (489)
+++...|+++... ++..|++++.++.+ |+++|++.+++ ++.+|++..+++++|.+.|++
T Consensus 92 v~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~lv~~~~~~n~tG~~~~~~ 158 (381)
T PRK02948 92 ITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP-------------DTVLASIQHANSEIGTIQPIA 158 (381)
T ss_pred EECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC-------------CCEEEEEECCcCCcEeehhHH
Confidence 9999999887654 34568888777643 77888877643 345788889999999999999
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHH-HHHHHh---hCC
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKEL-IQYLKY---TCP 335 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~-~~~l~~---~~~ 335 (489)
+|.++|+++|+++++|++|++|... .++...++|+++.|++|.+|++| |+++.++++ +..+.. ...
T Consensus 159 ~I~~l~~~~~~~vivD~~~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~ 229 (381)
T PRK02948 159 EIGALLKKYNVLFHSDCVQTFGKLP---------IDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPGTTHEK 229 (381)
T ss_pred HHHHHHHHcCCEEEEEChhhccccc---------cCcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccCCCCCC
Confidence 9999999999999999999866431 12222346999999999999888 888877664 111110 011
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC-CCC----eEEEEeCCCCc
Q 046230 336 AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN-DSP----VMPIMLYNPAK 410 (489)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~-~~~----~~~~~~~~~~~ 410 (489)
.+. ..+.|.+..+++.++|+.+.. +.++.+++++++.+++++.|+++|+++.... ..+ ++.+.+. ...
T Consensus 230 ~~~-~~t~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~-~~~ 302 (381)
T PRK02948 230 GFR-PGTVNVPGIAAFLTAAENILK-----NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK-GIE 302 (381)
T ss_pred CcC-CCCccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC-CCC
Confidence 111 224777888888888887632 5677889999999999999999987654321 222 2222222 234
Q ss_pred HHHHHHHHhhCCceEEeecC-------CC---------cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 411 IPAFSRECLRQNVAVVTVAF-------PA---------TPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~-------p~---------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..++...|.++||.+..... |+ .+...+++|+++...+|++|+|+++++|+++++.+
T Consensus 303 ~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 303 GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56788888888999986332 11 11235789999999999999999999999987765
No 155
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=5.4e-26 Score=228.95 Aligned_cols=320 Identities=16% Similarity=0.154 Sum_probs=231.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~ 176 (489)
++.+|+|+.+. -.++. ++.+.+++.+.+.+... +...| ..+|++.+|++++.+ +.|++++|+... ..
T Consensus 28 ~~~~i~l~~ne-n~~~~-~~~v~~a~~~~~~~~~~-----Yp~~g----~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 28 DHSFVKLASNE-NPFGC-SPRVLDELQKSWLDHAL-----YPDGG----ATTLRQTIANKLHVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCceEEeCCCC-CCCCC-CHHHHHHHHHHHHhcCc-----CCCCC----HHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 45789987542 22332 36788888877654221 11112 378999999999864 688888887665 77
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
++.+++++||.|++..|+|..+...+...|++++.++.+ |+++|++.+++ +.++++ +.+++++
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~------------~~~~v~-i~~P~NP 163 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN------------DTKIVW-ICNPNNP 163 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCc------------CCcEEE-EeCCCCC
Confidence 888889999999999999999999999999999888764 67788776643 244444 4567999
Q ss_pred CCCCCChH---HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 253 EGELCKFP---EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 253 ~G~~~~l~---~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
+|.+.+.+ +|+++|++++ ++|+||+|. .|-..+........++..+..|+++||||+||.+| ||+++++++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~ 240 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYY--EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL 240 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHH--HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH
Confidence 99998855 5555555655 577799997 55433211110111222334689999999999889 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.+...... + +.|.+.+.++.++|+- ....+..++...++.+++.+.|+.+|+.+..+ .++++++.+.
T Consensus 241 ~~~l~~~~~~--~--~~~~~~q~aa~~~l~~------~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~~ 309 (366)
T PRK01533 241 IEKLNVVRLP--F--NVSSLAQKAATIAFGD------DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPVE 309 (366)
T ss_pred HHHHHHhcCC--C--CcCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeCC
Confidence 9998765532 3 3788888888888742 12445667777788888888898889887655 4666666653
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
...++.+.|+++||.+.+ + .+++||++ -+.++.++++++|+++++....|
T Consensus 310 ---~~~~~~~~l~~~GI~Vr~--~------~~~iRis~---~~~~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 310 ---NGGEIYEACAHAGFIIRP--F------PNGVRITV---GTREQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred ---CHHHHHHHHHHCCcEEcc--C------CCceEEeC---CCHHHHHHHHHHHHHHHHhcccc
Confidence 457899999999999995 2 26799998 57899999999999887655433
No 156
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.7e-25 Score=225.23 Aligned_cols=318 Identities=17% Similarity=0.131 Sum_probs=229.7
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~ 175 (489)
+..+|||+.+ |.++.+ |.+.+++.+. ... .. +. .....+|++.+|++++.+ +.|++++|+... .
T Consensus 51 ~~~~i~l~~n~~p~~~~---~~v~~a~~~~-~~~-~~-------Yp-~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~ 117 (380)
T PLN03026 51 PEDIVKLDANENPYGPP---PEVLEALGNM-KFP-YV-------YP-DPESRRLRAALAEDSGLESENILVGCGADELID 117 (380)
T ss_pred ccceEEccCCCCCCCCC---HHHHHHHHhh-Hhh-cc-------CC-CCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHH
Confidence 4678999754 333332 5566665431 110 00 11 112478999999999854 678888888765 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++..+|+.|++..|+|+.+...++..|++++.++.+ |+++|++.+... +.+ +|++.+++
T Consensus 118 ~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----------~~~-~v~l~~P~ 185 (380)
T PLN03026 118 LLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-----------KPK-LLFLTSPN 185 (380)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-----------CCc-EEEEeCCC
Confidence 7777888999999999999998888888899999888653 567777776331 234 45555789
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
|++|...+.+++.++++.. +++|+||+|. .|...+.... . ++..+..|+++||||++|.+| ||++++++++
T Consensus 186 NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~--~~~~~~~~~~-~--~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i 259 (380)
T PLN03026 186 NPDGSIISDDDLLKILELP-ILVVLDEAYI--EFSTQESRMK-W--VKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 259 (380)
T ss_pred CCCCCCCCHHHHHHHHhcC-CEEEEECcch--hhcCCcchHH-H--HHhCCCEEEEecchHhhcCccccceeeecCHHHH
Confidence 9999999999999999865 9999999998 6644332211 1 112233689999999999889 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN 407 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~ 407 (489)
+.+...... ++ .+.+.+.++.++|+.- ...++.++.++++.+++.+.|+++++....+.+++++++.+..
T Consensus 260 ~~l~~~~~~--~~--~~~~~q~aa~~aL~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 329 (380)
T PLN03026 260 EYLWRAKQP--YN--VSVAAEVAACAALSNP------KYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTS 329 (380)
T ss_pred HHHHHhcCC--CC--CCHHHHHHHHHHhhCH------HHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCC
Confidence 988766543 33 6677777777777421 2456778888999999999999986432345567777776654
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.....++.+.|+++||.+.+... +...+++||++. +++++++++++|+++
T Consensus 330 ~~~~~~~~~~l~~~gI~v~~~~~---~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 330 GRDAKKLKEDLAKMGVMVRHYNS---KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCHHHHHHHHHHCCeEEEECCC---CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 45678899999999999986322 234579999984 788899999988753
No 157
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=4e-25 Score=225.03 Aligned_cols=330 Identities=15% Similarity=0.142 Sum_probs=224.8
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHH----hCCC----CEEEeCcc-
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARF----VGKP----AAIVFGMG- 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~----~g~~----~~i~~~sG- 170 (489)
...+||+.+. ..... ++.+.+++.+.+.. . ...+....|. .++++.++++ .|.+ +.+++++|
T Consensus 24 ~~~i~l~~g~-p~~~~-~~~~~~~~~~~~~~-~--~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 94 (387)
T PRK07777 24 TGAVNLGQGF-PDEDG-PPEMLEAAQEAIAG-G--VNQYPPGPGI----PELRAAIAAQRRRRYGLEYDPDTEVLVTVGA 94 (387)
T ss_pred CCeEEccCCC-CCCCC-CHHHHHHHHHHHhc-C--CCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 3578887333 12221 34556666665543 1 1111112233 6677777765 3532 24666555
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
++++..++.++..+||.|++..++|..+...+...|+.++.++.+ |+++|++.+.. +.+
T Consensus 95 ~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~- 161 (387)
T PRK07777 95 TEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP------------RTR- 161 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc------------ccE-
Confidence 556677788888999999999999999988888889988777543 56677665543 234
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC---ccccccCCCCCCccEEEcccccccCCc
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR---GVCELLEVDTADVDIMMGTFTKSFGSC 316 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~---~~~~~~~v~p~~~Di~~~t~sK~~g~~ 316 (489)
+|++.+.++++|...+ +++|+++|++|++++|+||+|. .+...+. ......+. .+.+|+++||||.||.+
T Consensus 162 ~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~ 237 (387)
T PRK07777 162 ALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYE--HLVFDGARHLPLATLPGM--RERTVTISSAAKTFNVT 237 (387)
T ss_pred EEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccch--hcccCCCCcccHhhCCCC--cCcEEEEeechhhccCc
Confidence 4555678899998755 8899999999999999999998 4443332 12211111 34579999999999977
Q ss_pred c---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046230 317 G---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL 393 (489)
Q Consensus 317 G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~ 393 (489)
| ||+++++++++.+........+. .+.+.+.++..+++. ...+.++.++.++++.+++.+.|++.++.+.
T Consensus 238 GlRiG~~~~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (387)
T PRK07777 238 GWKIGWACGPAPLIAAVRAAKQYLTYV--GGAPFQPAVAHALDH-----EDAWVAALRDSLQAKRDRLAAGLAEAGFEVH 310 (387)
T ss_pred CceeEEEecCHHHHHHHHHHHhhcccC--CCCHHHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 8 99999999998887655433332 344444444444431 1235677788999999999999999988877
Q ss_pred CCCCCCeEEEEeCC--CCcHHHHHHHHhh-CCceEEeec-CC-CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 394 GDNDSPVMPIMLYN--PAKIPAFSRECLR-QNVAVVTVA-FP-ATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 394 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~Gi~v~~~~-~p-~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.+++++++.+.. .....+|++.|++ +||.+.|.. |. ..+.+.+++||+++ .+++++++++++|.++.
T Consensus 311 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 311 DSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred CCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 67677777766532 2356789999975 699999843 22 12334579999995 47999999999998754
No 158
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.9e-25 Score=225.69 Aligned_cols=327 Identities=17% Similarity=0.195 Sum_probs=229.3
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeCccHHH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFGMGYVT 173 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~sG~~a 173 (489)
.++||+.++. .++. ++.+.+++.+.+.. ....+....|. .+|++.+|+++. .++.+++++|++.
T Consensus 30 ~~i~l~~g~p-~~~~-~~~~~~~~~~~~~~---~~~~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~ 100 (384)
T PRK06348 30 DIIDLSLGDP-DLIT-DESIINAAFEDAKK---GHTRYTDSGGD----VELIEEIIKYYSKNYDLSFKRNEIMATVGACH 100 (384)
T ss_pred CcEEcCCCCC-CCCC-CHHHHHHHHHHHhc---CCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCChhhEEEcCChHH
Confidence 4788874432 2221 34555555444332 11111122233 678888888772 2467777777766
Q ss_pred H-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 174 N-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 174 ~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
. ..++.+++++|+.|+++.|+|..+...+...|+.++.++.. |+++|++.++. ..+++++
T Consensus 101 al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~v~l 168 (384)
T PRK06348 101 GMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS------------KTKAIIL 168 (384)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc------------CccEEEE
Confidence 5 78888889999999999999999999999999988887631 56777776643 2444544
Q ss_pred EcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---
Q 046230 246 VEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 246 ve~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
.+.++++|.+.+ +++|+++|++||++||+||+|. .+...+.. .....+. .+..|+++||||++|.+|
T Consensus 169 -~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~--~~~vi~~~SfSK~~~l~GlRi 243 (384)
T PRK06348 169 -NSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYD--GFSFYEDFVPMATLAGM--PERTITFGSFSKDFAMTGWRI 243 (384)
T ss_pred -eCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccc--cceeCCCccchhhcCCC--cCcEEEEecchhccCCccccc
Confidence 467899998866 7899999999999999999999 55433322 1111111 234689999999999779
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN 396 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~ 396 (489)
||+++++++++.+........++ .+++.+.++..+|+.. ....++.++.++++.+++.+.|+++ ++.+..+.
T Consensus 244 G~~v~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~-----~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~ 316 (384)
T PRK06348 244 GYVIAPDYIIETAKIINEGICFS--APTISQRAAIYALKHR-----DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPK 316 (384)
T ss_pred eeeecCHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCC
Confidence 99999999999887665433344 6777777777766521 2245677888888899999999887 66666666
Q ss_pred CCCeEEEEeCC-CCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYN-PAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
++.++++.+.. .....++++.|++ .||.+.|..... ..+.+++|++++ .+++++++++++|.+.
T Consensus 317 gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 317 GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFG-ESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhc-cCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 67777777653 3467789998875 599999743222 234679999994 6899999999998653
No 159
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=1.7e-25 Score=229.05 Aligned_cols=325 Identities=18% Similarity=0.247 Sum_probs=228.0
Q ss_pred CccchHHHHHHHHHh-CCCCCCc-ccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHH-HHhHhhh----cCCCCE
Q 046230 117 DEYCTPRVIESLKKY-SPSTCSS-RVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTN-SAILPVL----MRKGSL 187 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~-~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~-~~~~~al----~~~g~~ 187 (489)
++.+.+++.+.+++. +....+. ....-......++++.++++++.+ +.+++++|+++. ..++.++ .++|+.
T Consensus 31 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~ 110 (403)
T TIGR01979 31 PQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDE 110 (403)
T ss_pred CHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCE
Confidence 467788887776652 2211111 100012345678999999999975 567776666554 5555553 478999
Q ss_pred EEEcCCCchHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 188 IISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 188 Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
|++..+.|.+... .+...|++++.++.+ |++++++.+.+ ++.+|++..+.+++|.+.|
T Consensus 111 vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~-------------~~~lv~~~~~~~~tG~~~~ 177 (403)
T TIGR01979 111 IVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE-------------KTKLVAITHVSNVLGTVNP 177 (403)
T ss_pred EEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc-------------CCeEEEEEcccccccccCC
Confidence 9999999987543 345678888887654 67778777653 3456777788899999999
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCC-
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPA- 336 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~- 336 (489)
+++|.++|+++|+++++|++|+.|.. ..++...++|+++.|++|.+|+.| |+++.++++++.+.....+
T Consensus 178 ~~~i~~~~~~~~~~~ivD~a~~~g~~---------~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~ 248 (403)
T TIGR01979 178 VEEIAKLAHQVGAKVLVDGAQAVPHM---------PVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGG 248 (403)
T ss_pred HHHHHHHHHHcCCEEEEEchhhcCcc---------ccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCC
Confidence 99999999999999999999985532 122222345999999999999878 9999998887765422110
Q ss_pred -----------------ccc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC-
Q 046230 337 -----------------HLY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN- 396 (489)
Q Consensus 337 -----------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~- 396 (489)
..+ ..+.+...++++.++++.+... ..++..++..++.+++++.|+++ |+.++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~----g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~ 324 (403)
T TIGR01979 249 EMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAI----GLENIEAHEHELTAYALERLGEIPGLRIYGPRD 324 (403)
T ss_pred CceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Confidence 001 1134556677778888876321 24677889999999999999988 78876543
Q ss_pred ---CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 397 ---DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 397 ---~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.++.+.+.. ....++.+.|.++||.+.+..+...| ...+.+||+++..+|++|+++++++|+++++.++
T Consensus 325 ~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~~ 403 (403)
T TIGR01979 325 AEDRGGIISFNVEG-VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFFG 403 (403)
T ss_pred ccccCceEEEEeCC-cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHhC
Confidence 25566666543 34667888899999999753322111 1136899999989999999999999999887764
No 160
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=2e-25 Score=212.56 Aligned_cols=323 Identities=17% Similarity=0.157 Sum_probs=248.7
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeCccHHH-HHHhHhhhc
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFGMGYVT-NSAILPVLM 182 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~sG~~a-~~~~~~al~ 182 (489)
+.|. .+|+|.+|+.+.++..-.+++ ++. .++-+.+++|.. .++.++++.|--- ...++++++
T Consensus 35 MDf~-~pp~i~~Al~~rvdhGvfGY~-----~~~----~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T 104 (388)
T COG1168 35 MDFP-TPPEIIEALRERVDHGVFGYP-----YGS----DELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT 104 (388)
T ss_pred ccCC-CCHHHHHHHHHHHhcCCCCCC-----CCC----HHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC
Confidence 4454 358999999999987323321 123 456666666653 2467888777654 599999999
Q ss_pred CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 183 RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 183 ~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
++||.|++..|.|+.+.......|.++...|.- |+++||+.+.+ .++.+++..+.+|++|
T Consensus 105 ~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~------------~~vkl~iLCnPHNP~G 172 (388)
T COG1168 105 KPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD------------ERVKLFILCNPHNPTG 172 (388)
T ss_pred cCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc------------CCccEEEEeCCCCCCC
Confidence 999999999999999999999999998887543 89999999987 2445666677889999
Q ss_pred CC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC--CccEEEcccccccCCcc---eE-EEeCHH
Q 046230 255 EL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA--DVDIMMGTFTKSFGSCG---GY-IAGSKE 325 (489)
Q Consensus 255 ~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~--~~Di~~~t~sK~~g~~G---G~-i~~~~~ 325 (489)
.+ ..|.+|.+||.+||+++|.||+|+ .+-..|........+++. +.-|.+.+-||+|..+| ++ |+.+++
T Consensus 173 rvwt~eeL~~i~elc~kh~v~VISDEIHa--Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~ 250 (388)
T COG1168 173 RVWTKEELRKIAELCLRHGVRVISDEIHA--DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE 250 (388)
T ss_pred ccccHHHHHHHHHHHHHcCCEEEeecccc--cccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHH
Confidence 88 459999999999999999999999 887777443334445443 45577778899999888 55 456677
Q ss_pred HHHHHH-hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCCCeEE
Q 046230 326 LIQYLK-YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDNDSPVMP 402 (489)
Q Consensus 326 ~~~~l~-~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~ 402 (489)
+.+++. ........ ..|.+.+.|..++.+. +..+.+++++-++.|.+++.+.|.+. ++.+..+.+++++|
T Consensus 251 lr~~~~~~l~~~~~~--~~n~lg~~A~~aAY~~-----G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~W 323 (388)
T COG1168 251 LRAKFLKRLKRNGLH--GPSALGIIATEAAYNQ-----GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAW 323 (388)
T ss_pred HHHHHHHHHHHhcCC--CCchHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeee
Confidence 644443 22222222 3788888888888774 56789999999999999999999998 89999999999999
Q ss_pred EEeCCCC-cHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 403 IMLYNPA-KIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 403 ~~~~~~~-~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+..-. ...++.+.|+++ +|.+.+ |....+.+.+.+|+.+ +.+++-+++++++|..+++..
T Consensus 324 LD~r~l~l~d~~l~~~ll~~akVal~~-G~~FG~~g~gf~RlN~--acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 324 LDCRELGLDDSELAEFLLEEAKVALSP-GSTFGEEGSGFVRLNF--ACPRAILEEALERLKRALKKR 387 (388)
T ss_pred eeccccCCChHHHHHHHHHhhcEeccC-CCccCcCCCceEEEec--CCCHHHHHHHHHHHHHHHhcc
Confidence 9886443 336888889988 888884 4455567889999988 899999999999999887653
No 161
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.6e-25 Score=228.89 Aligned_cols=321 Identities=17% Similarity=0.208 Sum_probs=226.0
Q ss_pred CccchHHHHHHHHHhCCCCCCcc-cCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHH-HHHhHhhh---cCCCCEEEE
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSR-VDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVT-NSAILPVL---MRKGSLIIS 190 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a-~~~~~~al---~~~g~~Vl~ 190 (489)
++.+.+++.+.+.++.....+.+ ...+..+..+++++.++++++.+ +.+++++|+.. +..++.++ .++|+.|++
T Consensus 30 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~ 109 (397)
T TIGR01976 30 PQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIV 109 (397)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 57889999998877543222211 11123456789999999999964 45666555544 44444443 578999999
Q ss_pred cCCCchHHHH----HHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH
Q 046230 191 DSLNHNSIVN----GARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP 260 (489)
Q Consensus 191 ~~~~h~~~~~----~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~ 260 (489)
..+.|.+... .++..|++++.++.+ |++++++.+.+ ++.+|++..+++++|.+.|++
T Consensus 110 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~-------------~~~lv~i~~~~n~tG~~~~~~ 176 (397)
T TIGR01976 110 TRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP-------------RTRLVAVTAASNTLGSIVDLA 176 (397)
T ss_pred cCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC-------------CceEEEEeCCCCCCCccCCHH
Confidence 9999987653 346679988877653 57777777643 345777888999999999999
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccc
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYA 340 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~ 340 (489)
+|.++|+++|+++++||+|+.|.. ..++...++|++++|++|++|+..|++++++++++.+......+.+.
T Consensus 177 ~i~~~~~~~~~~~ivD~a~~~~~~---------~~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~~~~l~~~~~~~~~~ 247 (397)
T TIGR01976 177 AITELVHAAGALVVVDAVHYAPHG---------LIDVQATGADFLTCSAYKFFGPHMGILWGRPELLMNLPPYKLTFSYD 247 (397)
T ss_pred HHHHHHHHcCCEEEEehhhhcccc---------CCCHHHcCCCEEEEechhhcCCceEEEEEcHHHHhhCCCccccCccC
Confidence 999999999999999999974321 12222234599999999999875599999999888776443222221
Q ss_pred --------cCCCHHHHHHHHHHHHHHHccCCCc----------hHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC----CC
Q 046230 341 --------TSISPPAAEQIISAIKVILGEDGSS----------RGAQKLARIRENSNFFRSELQKMG-FEVLGD----ND 397 (489)
Q Consensus 341 --------~~~~p~~~aa~~a~L~~i~~~~~~~----------~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~----~~ 397 (489)
.+.+....++..++++.+....... ..+...++..+..+++++.|++++ +.+.++ ..
T Consensus 248 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 327 (397)
T TIGR01976 248 TGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAAR 327 (397)
T ss_pred CCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCC
Confidence 1345556777778888774321000 134566777888999999999884 777654 24
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC--------CCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF--------PATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--------p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
++++.+.+.. ....++.++|.++||.+....+ +..+...+++|+++...+|++|+++++++|
T Consensus 328 ~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 328 VPTVSFTVHG-LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CceEEEEeCC-cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 6676665542 3567899999999999985422 223334578999999999999999999864
No 162
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=229.11 Aligned_cols=334 Identities=17% Similarity=0.202 Sum_probs=232.3
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEeCccH-
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVFGMGY- 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG~- 171 (489)
..+|||+.+. ..++. ++.+.+++.+.+... ...+....|. .+|++.+|+++ |. ++.+++++|+
T Consensus 33 ~~~i~l~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGE-PDFDT-PKNIKEAAKRALDEG---WTHYTPNAGI----PELREAIAEYYKKFYGVDVDVDNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCC-CCCCC-CHHHHHHHHHHHhcC---CCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCcccEEEeCChH
Confidence 3478886433 12221 356677776665531 1111122233 78888888886 32 3556666554
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
+++..++.+++++|+.|+++.++|..+...+...|++++.++.+ |++++++.+.. ..+ ++
T Consensus 104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------------~~~-~v 170 (391)
T PRK08361 104 EATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK------------RTR-MI 170 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc------------ccE-EE
Confidence 55677888889999999999999999999899999999888753 56777776653 234 44
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---e
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
++.++++++|...+ +++|+++|+++++++|+||+|. .+...+.........++ +.+++++||||.+|.+| |
T Consensus 171 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG 247 (391)
T PRK08361 171 VINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE--HFLYEGAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLG 247 (391)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc--cceeCCCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhh
Confidence 45567899999988 8899999999999999999998 44322221112222222 34799999999999778 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND 397 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~ 397 (489)
|+++++++++.+........+ +.+.+.+.++..+|+.- ......++.++.++++.+.+.+.|+++ ++.+..+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g 322 (391)
T PRK08361 248 FVIAPEQVIKDMIKLHAYIIG--NVASFVQIAGIEALRSK---ESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG 322 (391)
T ss_pred hhccCHHHHHHHHHHHhhhcc--CCChHHHHHHHHHhcCC---cccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence 999999999887654432222 25666666666665421 111235677888899999999999987 777766666
Q ss_pred CCeEEEEeCC-CCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 398 SPVMPIMLYN-PAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 398 ~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
++++++.+.. .....++.+.|++ +||.+.+.... ...+.+++||+++ .+++++++++++|.+++++
T Consensus 323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAF-GKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhh-CCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 7777776653 3457788888875 69999973321 1234579999985 5788999999999988754
No 163
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=3e-25 Score=222.77 Aligned_cols=324 Identities=16% Similarity=0.190 Sum_probs=230.2
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCccHH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMGYV 172 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG~~ 172 (489)
+.+||++.+. .++. ++.+.+++.+.+.. ...+....|. .+|++.+++++ |. ++ .|++++|++
T Consensus 1 ~~~~~~~g~p-~~~~-~~~~~~~~~~~~~~----~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~ 70 (350)
T TIGR03537 1 RLFDFGTGDP-KEPT-PPFIRKALIDAVPE----VSQYPSALGT----KALREAISGWFERRFGVKLDPDAQVLPSAGSK 70 (350)
T ss_pred CeEeccCCCC-CCCC-CHHHHHHHHHHHhc----cCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChH
Confidence 3678875542 2332 45677777665432 1111111233 67888888876 42 34 788888876
Q ss_pred HH-HHhHhhhcCCC---CEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TN-SAILPVLMRKG---SLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~-~~~~~al~~~g---~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
.. ..++.+++++| |.|+++.|+|..+...++..|++++.++.+ |++++++++.+ +.+
T Consensus 71 ~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~~ 138 (350)
T TIGR03537 71 EAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE------------ETK 138 (350)
T ss_pred HHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh------------ccE
Confidence 65 77777788776 699999999999999999999999988653 67788877754 245
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++ +.+.++++|...+ +++|.++|++||+++|+||+|. .+-..+... .....++ +..|+++||||.+|.+|
T Consensus 139 ~i~-i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~-~~~~~~~-~~~i~~~s~SK~~g~~Gl 213 (350)
T TIGR03537 139 IVW-INYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT--EIYFGEPPH-SALEVGI-ENVLAFHSLSKRSGMTGY 213 (350)
T ss_pred EEE-EeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc--ccccCCCCC-chhhcCc-CCEEEEeecccccCCccc
Confidence 444 4467899999887 8999999999999999999998 332222211 1112222 23588999999998888
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+......+ +.+.++..++++.+++.. ..+..+.+++++++.+.+.+.|++.|+.+..+
T Consensus 214 RiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~------~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~ 285 (350)
T TIGR03537 214 RSGFVAGDEKLISFLRKLRANF--GVASPDFVQAAAKAAWSD------DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP 285 (350)
T ss_pred cceeeecCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCC------cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999999999888654432 223555555656565431 22556778889999999999999998887766
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.++.++++.+.......++++.|.++||.+.+..... ....+++|+++. .+++++++++++|++
T Consensus 286 ~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~-~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 286 DATFYLWVKVPSGIDAKDYALRLLENGIVVAPGENFG-SGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhC-CCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 6677777777665567899999999999998733221 223578999983 678999999988864
No 164
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=4.3e-25 Score=225.77 Aligned_cols=340 Identities=18% Similarity=0.191 Sum_probs=236.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
|+.+|||+.++. .++. ++.+.+++.+.+.. ..... |+......+|++.+|+++ |. ++ .|++++|
T Consensus 29 ~~~~i~l~~~~p-~~~~-~~~~~~~~~~~~~~--~~~~~----Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (405)
T PRK09148 29 GADIIDLGMGNP-DLPT-PQHIVDKLCETAQD--PRTHR----YSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLG 100 (405)
T ss_pred CCCeEEcCCCCC-CCCC-CHHHHHHHHHHHcC--cccCC----CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC
Confidence 677899975432 2221 35566666665532 11111 112222367888888876 32 34 6888888
Q ss_pred HHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 171 YVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 171 ~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
++.. ..++.+++++||.|+++.|+|..+...+...|++++.++.+ +++++++.++.. .+ +..+++
T Consensus 101 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~---------~~-~~~~v~ 170 (405)
T PRK09148 101 SKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHS---------IP-KPIALI 170 (405)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhc---------cc-cceEEE
Confidence 7665 78888899999999999999999988888899999888754 445666666532 12 334555
Q ss_pred EcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc---e
Q 046230 246 VEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 246 ve~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G---G 318 (489)
+...+|++|.+.+ +++|.++|++||++||+||+|. .+-..+........++ ..+..|+++||||.+|.+| |
T Consensus 171 l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 171 VNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS--EIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch--hhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 5666899999977 5789999999999999999998 5443332211112221 1233577899999999879 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.+........++ .+++.+.++.+.|+. .....++.++.++++.+++.+.|++.|+.+..+.++
T Consensus 249 ~~v~~~~~i~~l~~~~~~~~~~--~~~~~q~~~~~~L~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g 321 (405)
T PRK09148 249 FAVGNERLIAALTRVKSYLDYG--AFTPIQVAATAALNG-----PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAAS 321 (405)
T ss_pred eeeCCHHHHHHHHHHHHHhccC--CChHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCee
Confidence 9999999999887654432233 566666666666541 123567778889999999999999988876656677
Q ss_pred CeEEEEeCCC---CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 399 PVMPIMLYNP---AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 399 ~~~~~~~~~~---~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.++++.+... ....++++.|+ ++||.+.+..... ..+.+++||+++ .+.+++++++++|.++++...
T Consensus 322 ~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 322 MFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG-EHGDGYVRIALV--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred EEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 7777776542 23567888877 5799999843222 223579999994 689999999999999887654
No 165
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=3.5e-25 Score=225.24 Aligned_cols=333 Identities=15% Similarity=0.134 Sum_probs=230.1
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---CC-EEEeCcc-
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---PA-AIVFGMG- 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sG- 170 (489)
..++||+.++. .++. ++.+.+++.+.+.+.... ++......+|++.+|++++ . ++ .+++++|
T Consensus 28 ~~~i~l~~~~p-~~~~-~~~~~~a~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~ 98 (387)
T PRK07683 28 DNLISLTIGQP-DFPT-PSHVKEAAKRAITENYTS-------YTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGA 98 (387)
T ss_pred CCeEEecCCCC-CCCC-CHHHHHHHHHHHhcCCCC-------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 45788874432 1222 356778888877642211 1112223778888888873 2 33 6777766
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++|+.|+++.+.|..+...++..|++++.++.+ |.+++++.+.. ..+ ++
T Consensus 99 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~-~i 165 (387)
T PRK07683 99 SEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE------------KTR-CV 165 (387)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc------------Cce-EE
Confidence 555577788888999999999999999888889999999888754 45667766543 233 45
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---e
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
++..+++++|...+ +++|+++|+++|+++|+||+|....++........+.+. .+..|+++||||.+|.+| |
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~pGlRiG 243 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM--REKTIVINGLSKSHSMTGWRIG 243 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC--cCCeEEEeeccccccCccceeE
Confidence 56778899999865 889999999999999999999933222222122222111 233688999999999779 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.+..... +.+ .+.+.+.+.++.+.|+. +..+.++.+++++++.+++.+.|++.++.+..+.++
T Consensus 244 ~i~~~~~l~~~~~~~~~-~~~-~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (387)
T PRK07683 244 FLFAPSYLAKHILKVHQ-YNV-TCASSISQYAALEALTA-----GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGA 316 (387)
T ss_pred EEEcCHHHHHHHHHHHH-hcc-CCCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCee
Confidence 99999999998876532 211 22455566666555542 122556778888999999999999988877666666
Q ss_pred CeEEEEeCC-CCcHHHHHHHH-hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 399 PVMPIMLYN-PAKIPAFSREC-LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 399 ~~~~~~~~~-~~~~~~~~~~l-~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.++++.+.. .....++...+ .++||.+.+..... +.+.+++||++. .+++++++++++|.+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~-~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 317 FYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS-EYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC-CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 666655543 33456677665 55699999733222 334689999995 5899999999999988753
No 166
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=4.3e-25 Score=225.79 Aligned_cols=335 Identities=13% Similarity=0.092 Sum_probs=234.3
Q ss_pred cceeEeccccccc---CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC------CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL---GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK------PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l---g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~------~~~i~~~s 169 (489)
|+.++||+.+++- .++. ++.+.+++.+.+.+.. .. .++......+|++.+|++++. ++.+++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~--~~----~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~ 102 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPT-DPEVMQAMKDSLDSGK--YN----GYAPTVGALSAREAIASYYHNPDGPIEADDVVLCS 102 (401)
T ss_pred CCCeeecCCCCCCCcCCCCC-CHHHHHHHHHHHhccC--CC----CCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECc
Confidence 5678999855542 2332 3667777777665421 11 112222337899999999862 35566666
Q ss_pred cH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|+ ++...++.++.++|+.|+++.|+|..+...++..|++++.++.+ |++++++.++. ..+
T Consensus 103 G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 170 (401)
T TIGR01264 103 GCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE------------KTA 170 (401)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc------------Cce
Confidence 65 55578888889999999999999999988889999998877542 56777776643 233
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
++++.+.++++|.+.+ +++|+++|+++|+++|+||+|. .|-..+........+.+....|+++||||.|+.+|
T Consensus 171 -~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 247 (401)
T TIGR01264 171 -ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG--DMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW 247 (401)
T ss_pred -EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh--hhccCCcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence 4556677899998865 8899999999999999999999 66555533222333433322488999999999889
Q ss_pred --eEEEeCH------HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 046230 318 --GYIAGSK------ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM- 388 (489)
Q Consensus 318 --G~i~~~~------~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (489)
||+++++ ++++.+...... .++ .+++.+.++.+.|+.- .....++.++.++++.+++.+.|+++
T Consensus 248 RiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~q~a~~~~l~~~----~~~~l~~~~~~~~~~r~~l~~~L~~~~ 320 (401)
T TIGR01264 248 RLGWIIIHDRRGILRDIRDGLVKLSQR-ILG--PCTIVQGALPSILLRT----PQEYFDGTLSVLESNAMLCYGALAAVP 320 (401)
T ss_pred eEEEEEecCcchhHHHHHHHHHHHhhc-cCC--CCcHHHHHHHHHHHhC----cHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999863 455555443321 122 5666667666666421 12356778888999999999999998
Q ss_pred CCeeeCCCCCCeEEEEeCC-----CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYN-----PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
|+.+..+.+++++++.+.. .....++.+.|+ ++||.+.+..... ..+++|++++ .+++++++++++|.+
T Consensus 321 ~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~---~~~~iRis~~--~~~~~l~~~l~rl~~ 395 (401)
T TIGR01264 321 GLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE---YPGFFRVVLT--VPVVMMEEACSRIQE 395 (401)
T ss_pred CCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC---CCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 7665566678888887642 124567888886 6799999743222 2478999995 468999999999999
Q ss_pred HHHHh
Q 046230 463 VGDLV 467 (489)
Q Consensus 463 ~~~~~ 467 (489)
+++++
T Consensus 396 ~~~~~ 400 (401)
T TIGR01264 396 FCERH 400 (401)
T ss_pred HHhcc
Confidence 87653
No 167
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.8e-25 Score=223.89 Aligned_cols=333 Identities=14% Similarity=0.145 Sum_probs=231.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~ 176 (489)
+.++|||+.+.. .++ .++.+.+++.+++...... .++......++++.+|++++.+ +.+++ +++++++..
T Consensus 27 ~~~~i~l~~~~~-~~~-~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 27 DKEMIWMGQNTN-HLG-PHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYL 98 (380)
T ss_pred cCCeEEccCCCC-CCC-CCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHH
Confidence 456888874421 222 2477888888887642111 1122233488999999999864 44555 555566688
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~ 248 (489)
++.+++.+|+.|++..+.|..+...+...|++++.++.+ |++++++.+.. ..++++++ +
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------------~~~~v~l~-~ 165 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE------------NTRLIYLI-D 165 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC------------CceEEEEe-C
Confidence 888888999999999999998877788889998887641 55667665543 34455555 5
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEe
Q 046230 249 IYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG 322 (489)
Q Consensus 249 v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~ 322 (489)
..+++|.+.+ +++|+++|+++|+++|+||+|+ .|.. +... ...+++ +..++++||||.+|++| ||+++
T Consensus 166 p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~-~~~~--~~~~~~-~~~i~~~s~SK~~g~~G~RiG~i~~ 239 (380)
T PRK06225 166 PLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR--DFAR-EHTL--AAEYAP-EHTVTSYSFSKIFGMAGLRIGAVVA 239 (380)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH--HHhc-cCCc--hhhcCC-CCEEEEeechhhcCCccceeEEEec
Confidence 5788998755 8999999999999999999997 5532 1111 112233 33688889999999778 99999
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee-eCCCCCCe
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV-LGDNDSPV 400 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v-~~~~~~~~ 400 (489)
++++++.++..... .++ .+.+.++++.++|+.. ....+..++.++++.+.+.+.|+++ |+.+ ..+..+.+
T Consensus 240 ~~~l~~~~~~~~~~-~~~--~~~~~~~~a~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 240 TPDLIEVVKSIVIN-DLG--TNVIAQEAAIAGLKVK-----DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred CHHHHHHHHHHHhc-ccC--CCHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 99999988765321 233 5677777777766532 1134555666677788888999885 5432 12345667
Q ss_pred EEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 401 MPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 401 ~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+++.+.. .....++.+.|.++||.+.+..+...+.+.+++|++++ .+++++++++++|.++++.++
T Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 312 MVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred EEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 7776643 34677899999999999987433222334679999984 589999999999999998764
No 168
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.4e-25 Score=222.92 Aligned_cols=317 Identities=18% Similarity=0.184 Sum_probs=220.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC----CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK----PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG 170 (489)
+++.+||++++.. ++ .++.+.+++.+..... .+....|. .+|++.+++++ +. ++.|++++|
T Consensus 20 ~~~~i~l~~~~p~-~~-~~~~~~~~~~~~~~~~-----~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~~I~it~G 88 (357)
T TIGR03539 20 PDGIVDLSVGTPV-DP-VPPLIRAALAAAADAP-----GYPQTWGT----PELREAIVDWLERRRGVPGLDPTAVLPVIG 88 (357)
T ss_pred CCCeEEccCCCCC-CC-CCHHHHHHHHHHHhhC-----CCCcccCC----HHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence 6678999865432 22 2355666666544321 11112244 56666666665 42 378888888
Q ss_pred HHHH-HHhHhhh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC
Q 046230 171 YVTN-SAILPVL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248 (489)
Q Consensus 171 ~~a~-~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~ 248 (489)
+... ..++.++ .++||.|+++.++|..+...++..|++++.++ |++.++ . .+..+|++.+
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~l~----~------------~~~~~v~~~~ 150 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTELD----P------------VGPDLIWLNS 150 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--ChhhcC----c------------cCccEEEEeC
Confidence 7766 5566666 68999999999999999888888999887763 433322 1 1334555668
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCcccccc----CCCCCCccEEEcccccccCCcc---e
Q 046230 249 IYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL----EVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 249 v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~----~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
++|++|...+ +++|.++|+++|+++|+||+|. .+...+....... +.. .+..|+++||||.+|.+| |
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARERGAVVASDECYL--ELGWEGRPVSILDPRVCGGD-HTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh--hhccCCCCccceecccCCCc-cccEEEEeccccccCCCceeEE
Confidence 8999998876 7789999999999999999998 6655443211110 111 123589999999998778 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.++.......+ +.+++.+.++.++|+. ....+..++.++++.+++.+.|++.|+.+..+.++
T Consensus 228 ~~i~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~ 299 (357)
T TIGR03539 228 FVAGDPALVAELLTVRKHAGL--MVPAPVQAAMVAALGD------DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAG 299 (357)
T ss_pred EEecCHHHHHHHHHHHhhccc--CCCHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCcc
Confidence 999999999988765433222 3666677766666642 12456677888889999999999988877666667
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
.++++.+. ....++.+.|.++||.+.+..+. .+.+.+++||+++. +++++++++++|
T Consensus 300 ~~~~~~~~--~~~~~~~~~l~~~gV~v~pg~~f-~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 300 LYLWATRG--EDAWDTVDRLAELGILVAPGDFY-GPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred EEEEEECC--CCHHHHHHHHHhCCEEECCcccc-CCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 66666553 35667889999999999985443 33456899999953 789999998876
No 169
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=2.7e-25 Score=224.37 Aligned_cols=318 Identities=17% Similarity=0.194 Sum_probs=220.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C---C-CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G---K-PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g---~-~~~i~~~sG 170 (489)
+..++||+.++.. .+ .++.+.+++.+..... .+....|. .++++.+|+++ | . ++.|++++|
T Consensus 26 ~~~~i~l~~~~p~-~~-~~~~~~~~~~~~~~~~-----~Y~~~~G~----~~lr~~ia~~l~~~~~~~~~~~~~I~it~G 94 (364)
T PRK07865 26 PDGIVDLSVGTPV-DP-VPPVIQEALAAAADAP-----GYPTTAGT----PELREAIVGWLARRRGVTGLDPAAVLPVIG 94 (364)
T ss_pred CCCEEEcCCCCCC-CC-CCHHHHHHHHHHHhhC-----CCCCccCC----HHHHHHHHHHHHHHcCCCCCCcccEEEccC
Confidence 4568899755432 11 1355666665544321 11112244 56777777776 3 2 468889999
Q ss_pred HHHH-HHhHhhh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC
Q 046230 171 YVTN-SAILPVL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248 (489)
Q Consensus 171 ~~a~-~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~ 248 (489)
+... ..++.++ +++|+.|+++.++|..+...++..|+++..++ ++++++. . ..+ +|++.+
T Consensus 95 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--~~~~l~~---~------------~~~-~v~~~~ 156 (364)
T PRK07865 95 SKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--SLTELGP---Q------------RPA-LIWLNS 156 (364)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--ChhhCCc---c------------cce-EEEEcC
Confidence 8776 4555666 68999999999999999999999999887764 3333321 1 234 444557
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccc----cCCCCCCccEEEcccccccCCcc---e
Q 046230 249 IYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL----LEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 249 v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~----~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
.+||+|.+.+ +++|+++|+++|++||+||+|. .+...+...... .+.+ .+..|+++||||.||.+| |
T Consensus 157 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~GlRiG 233 (364)
T PRK07865 157 PSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL--ELGWDAEPVSILDPRVCGGD-HTGLLAVHSLSKQSNLAGYRAG 233 (364)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh--hhccCCCCCccccccccCCc-cceEEEEeechhccCCCceeeE
Confidence 8999998865 7899999999999999999998 555444321111 0111 133599999999998778 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
|+++++++++.++.......++ .+++.++++.++|+. ....++.++.++++.+.+.+.|++.|+.+..+.++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 305 (364)
T PRK07865 234 FVAGDPALVAELLEVRKHAGMM--VPAPVQAAMVAALGD------DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAG 305 (364)
T ss_pred EEecCHHHHHHHHHHHHhcCCC--cCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc
Confidence 9999999999887654322222 566666666666542 12456677888999999999999988877666566
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
.++++.+ +....++.+.|.++||.+.+..+. .+...+++||+++. +++++++++++|.
T Consensus 306 ~~~~~~~--~~~~~~~~~~l~~~gv~v~pg~~f-~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 306 LYLWATR--GEDCWDTVAWLAERGILVAPGDFY-GPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred EEEEEeC--CCCHHHHHHHHHHCCEEEeCcccc-CcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 5555554 344567888999999999974432 23345799999963 7899999999874
No 170
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.7e-25 Score=221.16 Aligned_cols=319 Identities=15% Similarity=0.151 Sum_probs=230.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~ 176 (489)
++.+|||+.+.. .++. ++.+.+++.+.+.+..... ... ...+|++.+|++++.+ +.|++++|++.. ..
T Consensus 23 ~~~~i~l~~~~~-~~~~-~~~~~~a~~~~~~~~~~~y-------~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 23 LAKLIKLNTNEN-PYPP-SPKVLEAIRAALGDDLRLY-------PDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ccceeeccCCCC-CCCC-CHHHHHHHHHHhhhhhhcC-------CCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 356899975432 2332 3678888877665411111 111 1278999999999864 668888887665 78
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++..+||.|+++.|+|..+...++..|++++.++.+ |+++++ + ..+ +|++.+.++
T Consensus 93 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~----~------------~~~-~v~~~~P~N 155 (353)
T PRK05387 93 AFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYL----R------------PNG-GIIFPNPNA 155 (353)
T ss_pred HHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHH----h------------cCC-EEEEeCCCC
Confidence 888889999999999999988888788889998888754 344443 1 123 345566699
Q ss_pred CCCCCCChHHHHHHHHHc-CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 252 MEGELCKFPEIIAICKKY-KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~-~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
++|.+.+.+++.++++++ ++++|+||+|. .|+.. ......+. .+.+|+++||||.+|.+| ||++++++++
T Consensus 156 PtG~~~~~~~~~~l~~~~~~~~livDe~y~--~~~~~--~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 156 PTGIALPLAEIERILAANPDSVVVIDEAYV--DFGGE--SAIPLIDR--YPNLLVVQTFSKSRSLAGLRVGFAIGHPELI 229 (353)
T ss_pred CCCCCCCHHHHHHHHHhCCCcEEEEeCccc--ccCCc--chHHHHhh--CCCEEEEEehhHhhcchhhhceeeecCHHHH
Confidence 999999999999999886 99999999997 66422 11112221 233699999999999779 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN 407 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~ 407 (489)
+.++.....+ ...+.+++.+.++.++|+.- ...++.+++++++.+++.+.|++.|+.+.+ .+++++++.+.
T Consensus 230 ~~l~~~~~~~-~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~- 300 (353)
T PRK05387 230 EALNRVKNSF-NSYPLDRLAQAGAIAAIEDE------AYFEETRAKVIATRERLVEELEALGFEVLP-SKANFVFARHP- 300 (353)
T ss_pred HHHHHhhccC-CCCCcCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCeECC-CcCcEEEEECC-
Confidence 9987665432 12236777777777766421 145677888999999999999999987654 45666666554
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.....++++.|.++||.+...+. +...+++||+++ +.+++++++++|++++.
T Consensus 301 ~~~~~~~~~~l~~~gi~v~~~~~---~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 SHDAAELAAKLRERGIIVRHFNK---PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred CCCHHHHHHHHHHCCEEEEECCC---CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 34567899999999999975432 234579999984 67999999999988754
No 171
>PLN02187 rooty/superroot1
Probab=99.95 E-value=4.9e-25 Score=228.10 Aligned_cols=343 Identities=14% Similarity=0.088 Sum_probs=232.2
Q ss_pred cceeEecccccccCC--CCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGF--AASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~--~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~s 169 (489)
++.+|+|+..+.--+ ...++++.+++.+.++. +... .++......++++.+|++++ .++.|++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-~~~~-----~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-GKGN-----SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-CCCC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 578999875432222 21245677777777764 2211 11223334788999999874 246777877
Q ss_pred cHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|+.. ...++.+++++||.|+++.|+|+.+...+...|++++.++. + |+++|++++.. ..+
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~------------~~~ 206 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE------------NTV 206 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC------------CcE
Confidence 7655 48888899999999999999999998888899999888764 2 67788776643 234
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+ +++.+..+++|.+.+ +++|+++|++||++||+||+|. .+-..+........+.....-|+++||||.|+.+|
T Consensus 207 ~-v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~--~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl 283 (462)
T PLN02187 207 A-MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYD--RTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW 283 (462)
T ss_pred E-EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccc--ccccCCCCceeHHHhccCCcEEEEecchhhcCCccc
Confidence 4 444445799999876 8899999999999999999999 54433322111112221122588999999999989
Q ss_pred --eEEEeC-H-H---HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC
Q 046230 318 --GYIAGS-K-E---LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGF 390 (489)
Q Consensus 318 --G~i~~~-~-~---~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 390 (489)
||++++ + . +++.+......+..+.+.+.+.++++.++|+.- ...+.++.++.++++.+++.+.|++++.
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~----~~~~l~~~~~~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA----DKNFFAKKNKILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999973 3 2 334554444333333335677777777777520 1235677888899999999999998754
Q ss_pred ee--eCCCCCCeEEEEeCCC-----CcHHHHHHH-HhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 391 EV--LGDNDSPVMPIMLYNP-----AKIPAFSRE-CLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 391 ~v--~~~~~~~~~~~~~~~~-----~~~~~~~~~-l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.. ..+.++.++++.+... ....+++.. +.++||.+.|..... ..+++||++. ..++++++++++|.+
T Consensus 360 ~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg---~~~~iRis~~--~~~e~l~~al~rL~~ 434 (462)
T PLN02187 360 VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG---LKNWMRITIG--VEAHMLEDALERLKG 434 (462)
T ss_pred CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC---CCCeEEEEeC--CCHHHHHHHHHHHHH
Confidence 32 2344566666654321 134455554 467799999733221 2579999994 578999999999999
Q ss_pred HHHHhCCcc
Q 046230 463 VGDLVGIKY 471 (489)
Q Consensus 463 ~~~~~~~~~ 471 (489)
++++...+.
T Consensus 435 ~l~~~~~~~ 443 (462)
T PLN02187 435 FCTRHAKKT 443 (462)
T ss_pred HHHHhhhcc
Confidence 998876554
No 172
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=1.4e-24 Score=221.72 Aligned_cols=328 Identities=16% Similarity=0.165 Sum_probs=228.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CCC-----CEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GKP-----AAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-----~~i~~~s 169 (489)
|+++|||+.+.. .++. ++.+.+++.+.+... ..+....|. .+|++.+|+++ |.+ +.|++++
T Consensus 28 ~~~~i~l~~~~p-~~~~-~~~~~~~~~~~~~~~----~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~~~i~it~ 97 (396)
T PRK09147 28 DLPPISLSIGEP-KHPT-PAFIKDALAANLDGL----ASYPTTAGL----PALREAIAAWLERRYGLPALDPATQVLPVN 97 (396)
T ss_pred CCCeEecCCCCC-CCCC-CHHHHHHHHHHhhhh----cCCCCCCCC----HHHHHHHHHHHHHHhCCCcCCccceEEECC
Confidence 788999974432 2221 355667766655421 111112234 56777777765 532 3788888
Q ss_pred cHHHH-HHhHhhhcCC---CCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCC
Q 046230 170 GYVTN-SAILPVLMRK---GSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 170 G~~a~-~~~~~al~~~---g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
|+... ..++.+++++ |+.|+++.|+|..+...++..|++++.++.+ |++++++.+..
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------------ 165 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------------ 165 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh------------
Confidence 87665 7888889998 8999999999999988899999999988753 56777765543
Q ss_pred CccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC-ccccc------cCCCCCCccEEEcc
Q 046230 239 WKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR-GVCEL------LEVDTADVDIMMGT 308 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~-~~~~~------~~v~p~~~Di~~~t 308 (489)
+.+++++ .+.+|++|.+.+ +++|+++|++|+++||+||+|. .+-..+. ..... .+.+..+..|+++|
T Consensus 166 ~~k~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 242 (396)
T PRK09147 166 RTQLLFV-CSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYS--EIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHS 242 (396)
T ss_pred ccEEEEE-cCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccc--ccccCCCCCCchhhhhccccCccccccEEEEec
Confidence 2455554 577999998865 7899999999999999999998 5543332 11111 11111133599999
Q ss_pred cccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 309 FTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
|||.++.+| ||+++++++++.+....... +.+.+++.++++.+.+.. .....+.++.++++.+.+.+.|
T Consensus 243 ~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~a~~~~~~~------~~~~~~~~~~~~~~~~~~~~~L 314 (396)
T PRK09147 243 LSKRSNVPGLRSGFVAGDAALLKKFLLYRTYH--GCAMPPAVQAASIAAWND------EAHVRENRALYREKFDAVTPIL 314 (396)
T ss_pred cccccCCccceeeeecCCHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999889 99999999998887654322 223677777766666531 1245667888888888898888
Q ss_pred HhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCc-----CCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPAT-----PLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 386 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~-----~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++. +.+..+.+++++++.+. ....++++.|+ ++||.+.+...... +.+.+++||+++ .+++++++++++
T Consensus 315 ~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~r 389 (396)
T PRK09147 315 APV-LDVQLPDAGFYLWAKVP--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAER 389 (396)
T ss_pred HHh-cCCCCCCeeEEEEEECC--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHH
Confidence 875 55545667877777765 34577888886 56999998433221 234579999995 468899999999
Q ss_pred HHHHH
Q 046230 460 ISRVG 464 (489)
Q Consensus 460 l~~~~ 464 (489)
|.+++
T Consensus 390 l~~~~ 394 (396)
T PRK09147 390 IVDFC 394 (396)
T ss_pred HHHHh
Confidence 98875
No 173
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=9.9e-25 Score=223.69 Aligned_cols=336 Identities=15% Similarity=0.155 Sum_probs=233.7
Q ss_pred ccceeEecccccccC---CCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------------
Q 046230 98 KVNRCLNLGSYNYLG---FAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK------------- 161 (489)
Q Consensus 98 ~g~~~id~~s~~~lg---~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~------------- 161 (489)
.|+.+|||+..+.-. +. .++.+.+++.+.+.. . ....+ +......+|++.+|++++.
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~-~-~~~~Y----~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~ 103 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDS-Q-ECNGY----PPTVGSPEAREAVATYWRNSFVHKESLKSTIK 103 (412)
T ss_pred CCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhc-C-CCCCC----CCCCCcHHHHHHHHHHHHhhccccccccCCCC
Confidence 378899998443211 11 145677777666654 1 11111 1122237888888888752
Q ss_pred CCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCC
Q 046230 162 PAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 162 ~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~ 233 (489)
++.+++++|++. +..++.++.++||.|+++.|+|..+...++..|++++.++.+ |+++|++.+..
T Consensus 104 ~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------- 176 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD------- 176 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc-------
Confidence 366777777655 578888889999999999999999999999999998887652 56777766543
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s 310 (489)
+.+ +|++.+.+|++|...+ +++|+++|+++|++||+||+|. .+-..+........+++...-|+++|||
T Consensus 177 -----~~~-~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~i~~~SfS 248 (412)
T PTZ00433 177 -----RTK-ALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA--GMVFNGATFTSVADFDTTVPRVILGGTA 248 (412)
T ss_pred -----Cce-EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc--ccccCCCCccchhhccCCCceEEEccch
Confidence 234 4456677899998765 7888999999999999999998 6544432211122232222248899999
Q ss_pred cccCCcc---eEEEe------CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG------SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 311 K~~g~~G---G~i~~------~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (489)
|.+|.+| ||+++ .+++++.+...... .+ +.+++.++++.+.|.-- .....++.+++++++.+.+
T Consensus 249 K~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 249 KNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML-VC--GPCSVVQAALGEALLNT----PQEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred hhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-cC--CCChHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHH
Confidence 9998889 99986 24677777654321 12 36777777777766420 1225677888889999999
Q ss_pred HHHHHhC-CCeeeCCCCCCeEEEEeCCC-----CcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 382 RSELQKM-GFEVLGDNDSPVMPIMLYNP-----AKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 382 ~~~L~~~-g~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
.+.|++. |+.+..+.+++++++.+... ....++++.|++ +||.+.+..... ..+++|++++ ..+++++
T Consensus 322 ~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~iRis~~--~~~e~l~ 396 (412)
T PTZ00433 322 YNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH---MPGFTRLTIS--RPVEVLR 396 (412)
T ss_pred HHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC---CCCeEEEEec--CCHHHHH
Confidence 9999885 77766666777777776431 245789999985 699999743222 1478999995 4588999
Q ss_pred HHHHHHHHHHHHh
Q 046230 455 KALEVISRVGDLV 467 (489)
Q Consensus 455 ~~l~~l~~~~~~~ 467 (489)
+++++|.++++..
T Consensus 397 ~al~~l~~~~~~~ 409 (412)
T PTZ00433 397 EAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 174
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=9.8e-25 Score=224.26 Aligned_cols=337 Identities=15% Similarity=0.139 Sum_probs=229.8
Q ss_pred cceeEecccccccCCCC--CCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAA--SDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (489)
|+++|+|+..+.--++. .++++.+++.++++..... .+....|. .++++.+|++++. ++.+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~--~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~v~it~ 124 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN--SYSTCVGL----LPARRAIAEYLSRDLPYELSTDDIYLTA 124 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC--CCCCCccC----HHHHHHHHHHHhhccCCCCChhhEEEeC
Confidence 67899998554332221 2467888888887652111 11111233 7888888888753 25566666
Q ss_pred cH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|+ +++..++.++.++||.|+++.|+|..+...+...|+.++.++.. |++++++++.. +.+
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 192 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE------------NTV 192 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc------------Cce
Confidence 65 55588888889999999999999999888888889988887631 67888876654 344
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++++ +..|++|.+.+ +++|+++|+++|+++|+||+|. .+...+........+.....-|+++||||.++.+|
T Consensus 193 ~i~i~-~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~ 269 (430)
T PLN00145 193 AMVII-NPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYD--HLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGW 269 (430)
T ss_pred EEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccch--hhccCCCCccchhhhcccCcEEEEeccccccCCCCe
Confidence 44444 45799999987 8899999999999999999998 55443322111111222223699999999999989
Q ss_pred --eEEEe--CHHHHH------HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 --GYIAG--SKELIQ------YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 --G~i~~--~~~~~~------~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
||+++ ++.+++ .+..... ...+.+.+.++++...|+.- ..+..++.++.++++.+.+.+.|++
T Consensus 270 RlG~iv~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Q~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~L~~ 342 (430)
T PLN00145 270 RLGWIATCDPNGILKETKVVDSIRNYLN---ISTDPATFVQGAIPQIIANT----KEEFFTKTLGLLKETADICYEKIKE 342 (430)
T ss_pred eEEEEEEecchhhhhhhHHHHHHHHHhc---ccCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99986 344432 3333321 12234566677776666520 1225677888899999999999998
Q ss_pred C-CCeee-CCCCCCeEEEEeCCC-----CcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 388 M-GFEVL-GDNDSPVMPIMLYNP-----AKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 388 ~-g~~v~-~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
+ ++.+. .+.+++++++.+... ....+++..|++ +||.+.|..... ..+++||+++ .+.++++.++++
T Consensus 343 ~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg---~~~~lRis~~--~~~~~l~~al~r 417 (430)
T PLN00145 343 IKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALG---MKNWLRITFA--IDPPSLEDGLER 417 (430)
T ss_pred CCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEeC--CCHHHHHHHHHH
Confidence 7 66543 456677666655421 234567766665 599999743322 2479999995 588999999999
Q ss_pred HHHHHHHhC
Q 046230 460 ISRVGDLVG 468 (489)
Q Consensus 460 l~~~~~~~~ 468 (489)
|.+++.+..
T Consensus 418 l~~~~~~~~ 426 (430)
T PLN00145 418 LKSFCLRHA 426 (430)
T ss_pred HHHHHHHhc
Confidence 999987765
No 175
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=6.1e-25 Score=225.83 Aligned_cols=336 Identities=19% Similarity=0.230 Sum_probs=227.4
Q ss_pred ceeEeccc-ccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCcchhHHHHHH----HHHHHhCCCCE-EEeCccHH
Q 046230 100 NRCLNLGS-YNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGTLMVHNELEE----CVARFVGKPAA-IVFGMGYV 172 (489)
Q Consensus 100 ~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~-i~~~sG~~ 172 (489)
+.+||+.+ .|+ -+|.+.+++.+.+. .|+.+..+++...|. +...++++ .+++++|.+.. +++++|++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYANVQPHSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceeeecCCchH
Confidence 56788854 455 25788888877653 466555555444442 33445554 88999998765 66689999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHHH---HH--HhcCCeEEEecC------CCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIVN---GA--RGSGATIRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~~---~~--~~~g~~~~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
++..++.++.++||.|+++.++|+++.. .. ...|++++.++. .|++++++.+++. +.+
T Consensus 99 al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~k 167 (416)
T PRK00011 99 ANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH-----------KPK 167 (416)
T ss_pred HHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc-----------CCC
Confidence 9988889999999999999999976432 11 223456666553 2788999888641 234
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i 320 (489)
+++++.+. .|...|+++|.++|++||+++|+|++|+.|.++. |.. . ..+. .+|++++|++|++ |+.||++
T Consensus 168 ~v~~~~~~---~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~-g~~-~--~~~~--~~di~~~S~~K~l~g~~gg~i 238 (416)
T PRK00011 168 LIIAGASA---YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA-GVH-P--SPVP--HADVVTTTTHKTLRGPRGGLI 238 (416)
T ss_pred EEEECCCc---CCCccCHHHHHHHHHHcCCEEEEECcchhccccc-Ccc-C--CCCC--CCcEEEecCCcCCCCCCceEE
Confidence 44444443 4556799999999999999999999998654432 111 1 1111 3489999999999 4557999
Q ss_pred EeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CCCC
Q 046230 321 AGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG-DNDS 398 (489)
Q Consensus 321 ~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~-~~~~ 398 (489)
+++ +++++.++.....+.+++...+..++...+.++.+. ...++.+++++++.+++++.|+++|+.+.. ...+
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 313 (416)
T PRK00011 239 LTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALE-----PEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDN 313 (416)
T ss_pred EeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCC
Confidence 985 688888876655443433323333333334444431 134778899999999999999999987753 2235
Q ss_pred CeEEEEeCCCC-cHHHHHHHHhhCCceEEeecCC---CcCCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 046230 399 PVMPIMLYNPA-KIPAFSRECLRQNVAVVTVAFP---ATPLLLARARICISA----SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 399 ~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~p---~~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~ 466 (489)
+++++.+.... ...++.+.|.++||.+.....| ..+.....+|++... .+|++|+++++++|++++..
T Consensus 314 ~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 314 HLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred eEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 77777764332 4567888898999998742212 122334569986432 57899999999999988764
No 176
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=9.5e-25 Score=223.20 Aligned_cols=337 Identities=15% Similarity=0.149 Sum_probs=231.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC---CCEEEeCccH-HHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK---PAAIVFGMGY-VTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~-~a~ 174 (489)
|..++||+.+.. .++ .++.+.+++.+.+.+.. ..+....|..++.+.+++.+++..|. ++.+++++|+ ++.
T Consensus 32 ~~~~i~l~~g~p-~~~-~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 106 (402)
T PRK06107 32 GRSIVDLTVGEP-DFD-TPDHIKQAAVAAIERGE---TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI 106 (402)
T ss_pred cCCEEEcCCCCC-CCC-CCHHHHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 456888863321 122 14667788787776421 11222235544445555555555554 3568888876 555
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
..++.++.++|+.|+++.++|..+...+...+..++.++.+ |++++++.+.. ..+++++ .
T Consensus 107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~------------~~~~v~l-~ 173 (402)
T PRK06107 107 FLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP------------RTRWLIL-N 173 (402)
T ss_pred HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc------------CceEEEE-E
Confidence 77778889999999999999888877777778777766542 45666665532 2444444 4
Q ss_pred CcCCCCCCCCC---hHHHHHHHHHc-CcEEEEEcccccccccCCCCccccccCCCC--CCccEEEcccccccCCcc---e
Q 046230 248 GIYSMEGELCK---FPEIIAICKKY-KAYIYLDEAHSIGAVGKTGRGVCELLEVDT--ADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 248 ~v~s~~G~~~~---l~~i~~l~~~~-~~~li~DEa~s~g~~g~~G~~~~~~~~v~p--~~~Di~~~t~sK~~g~~G---G 318 (489)
++.|++|...+ +++|+++|+++ ++++|+||+|+ .+...+........+.+ .+..|+++||||.||.+| |
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~--~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD--HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc--ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 66899998876 67889999998 99999999998 55444332222222222 133688999999999779 9
Q ss_pred EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC
Q 046230 319 YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND 397 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~ 397 (489)
|+++++++++.+......... +.+.+.++++...|+- +....++.++.++++.+.+.+.|+++ |+.+..+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~g 324 (402)
T PRK06107 252 YAAGPADLIAAINKLQSQSSS--CPSSISQAAAAAALNG-----DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDG 324 (402)
T ss_pred eeecCHHHHHHHHHHHHhccc--CCChHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCc
Confidence 999999999988876543323 3677777777766641 22356778888999999999999887 777766777
Q ss_pred CCeEEEEeCC------C-----CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 398 SPVMPIMLYN------P-----AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 398 ~~~~~~~~~~------~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
++++++.+.. + ....++.++|+ ++||.+.+...... .+++||+++ .+++++++++++|.+.++
T Consensus 325 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~---~~~iRis~~--~~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 325 AFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL---SPYFRLSIA--TSLETLEEACARIERAVA 399 (402)
T ss_pred ceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC---CCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 8777776521 1 13456776665 56999997443322 468999996 579999999999999887
Q ss_pred Hh
Q 046230 466 LV 467 (489)
Q Consensus 466 ~~ 467 (489)
++
T Consensus 400 ~~ 401 (402)
T PRK06107 400 AL 401 (402)
T ss_pred hc
Confidence 64
No 177
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.3e-24 Score=221.19 Aligned_cols=332 Identities=14% Similarity=0.132 Sum_probs=228.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---CCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---PAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~~i~~~sG~ 171 (489)
++..+||++++. .+.. ++.+.+++.+.+.. .....+....|. .+|++.++++++ . ++.|++++|+
T Consensus 28 ~~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~--~~~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 99 (386)
T PRK07550 28 DGPLIDLSQAVP-GYPP-PPELLRALAEAAAD--PAAHLYGPVEGL----PELREAYAAHYSRLYGAAISPEQVHITSGC 99 (386)
T ss_pred CCCeEEeCCCCC-CCCC-CHHHHHHHHHHHhC--cCCcCCCCCCCC----HHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 566899975542 2221 34566666665532 111111122344 667777776653 2 3678888876
Q ss_pred H-HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 V-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~-a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
. +...++.++.++||.|+++.|+|..+...++..|++++.++.+ |.+++++.++. ..+++
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------------~~~~v 167 (386)
T PRK07550 100 NQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP------------RTRAI 167 (386)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc------------cCcEE
Confidence 5 5578888889999999999999999888888999999888763 56778877754 24555
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC-CCCCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV-DTADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v-~p~~~Di~~~t~sK~~g~~G-- 317 (489)
+++ +..+++|...+ +++|+++|++||+++|+||+|+ .+...+......+.. +..+..++++||||.+|.+|
T Consensus 168 ~~~-~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 168 ALV-TPNNPTGVVYPPELLHELYDLARRHGIALILDETYR--DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEe-CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch--hhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 555 45689998876 7899999999999999999998 554332211112211 11223578899999998667
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD 395 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~ 395 (489)
||+++++++++.+......... +.+...+.++...|+.+ ..+.++.+++++++.+.+.+.|++. ++.+. +
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 316 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAI--CAPRIGQIAVAWGLPNL-----ADWRAGNRAEIARRRDAFRAVFARLPGWELL-A 316 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhccc--CCCcHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-C
Confidence 9999999999888765543322 25666666666665532 1245667788899999999999986 66553 4
Q ss_pred CCCCeEEEEeCC-CCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYN-PAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 396 ~~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+++++++.+.. .....++++.|++ +||.+.+..... +.+.+++||+++ ..+++++++++++|.++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 317 SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFG-PGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhC-CCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 456676776654 4567889998764 699999743322 233578999995 46799999999999764
No 178
>PRK03321 putative aminotransferase; Provisional
Probab=99.95 E-value=4e-25 Score=222.21 Aligned_cols=316 Identities=17% Similarity=0.193 Sum_probs=228.1
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SAIL 178 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~ 178 (489)
.+|||+++. ..++. ++.+.+++.+.+..+.. . .. ....++++.+|++++.+ +.|++++|+++. ..++
T Consensus 23 ~~i~l~~~~-~~~~~-~~~~~~a~~~~~~~~~~-y----~~----~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNE-TPFGP-LPSVRAAIARAAAGVNR-Y----PD----MGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCC-CCCCC-CHHHHHHHHHHHHhcCc-C----CC----CcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHH
Confidence 478887542 22322 35788888776654221 1 11 22478999999999864 578889998876 6667
Q ss_pred hhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 179 PVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 179 ~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
.++.++|+.|+++.+.|..+...++..|++++.++.+ |++++++.++. +.++ |++.++++++
T Consensus 92 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~------------~~~~-v~l~~p~NPt 158 (352)
T PRK03321 92 QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD------------RTRL-IFVCNPNNPT 158 (352)
T ss_pred HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc------------CCCE-EEEeCCCCCc
Confidence 7788999999999999988877788889998888765 57777776643 2444 4445789999
Q ss_pred CCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHH
Q 046230 254 GELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQ 328 (489)
Q Consensus 254 G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~ 328 (489)
|.+.+.+++.++|++ +++++|+||+|. .+...+.........++.+..|+++||||.||.+| ||+++++++++
T Consensus 159 G~~~~~~~l~~l~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~ 236 (352)
T PRK03321 159 GTVVTPAELARFLDAVPADVLVVLDEAYV--EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIA 236 (352)
T ss_pred CCCcCHHHHHHHHHhCCCCeEEEEechHH--HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHH
Confidence 999999999999998 599999999998 55444322110111122233588899999999778 99999999999
Q ss_pred HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCC
Q 046230 329 YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP 408 (489)
Q Consensus 329 ~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~ 408 (489)
.+...... + +.+++.++++.++|... +...+.++++.++.+.+.+.|++.|+.+.+ .+++++++.+.
T Consensus 237 ~~~~~~~~--~--~~s~~~q~~a~~~l~~~------~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~~g~~i~i~l~-- 303 (352)
T PRK03321 237 ALRKVAVP--F--SVNSLAQAAAIASLAAE------DELLERVDAVVAERDRVRAALRAAGWTVPP-SQANFVWLPLG-- 303 (352)
T ss_pred HHHHhcCC--C--CCCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCCCEEEEeCC--
Confidence 98865422 2 37778877777777522 133455556666677899999988877644 35677666653
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
....++.+.|.++||.+.+. +.+.+||++ .+.+++++++++|+++++
T Consensus 304 ~~~~~~~~~l~~~gI~v~~~-------~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 304 ERTADFAAAAAEAGVVVRPF-------AGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred CCHHHHHHHHHHCCEEEEcc-------CCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 34678999999999999852 234699998 589999999999998754
No 179
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.7e-25 Score=228.75 Aligned_cols=313 Identities=17% Similarity=0.135 Sum_probs=211.3
Q ss_pred CCCccchHHHHHHHHHhCCCCCCc--ccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHH-HHhHhhhcCC--CCE
Q 046230 115 ASDEYCTPRVIESLKKYSPSTCSS--RVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTN-SAILPVLMRK--GSL 187 (489)
Q Consensus 115 ~~~~~v~~a~~~~l~~~~~~~~~~--~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~-~~~~~al~~~--g~~ 187 (489)
+.+|.+++++.++. ..-...... ....|..++..++++.+++++|.+ ..+++++|++++ ..++.++..+ |+.
T Consensus 32 ~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~ 110 (398)
T cd00613 32 HNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNK 110 (398)
T ss_pred CcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCE
Confidence 33677777766655 211111110 013466778889999999999876 555666666554 4555555555 999
Q ss_pred EEEcCCCchHHHHHHHhcC----CeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 188 IISDSLNHNSIVNGARGSG----ATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 188 Vl~~~~~h~~~~~~~~~~g----~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
|+++.++|+++...+...+ ++++.++.+ |++++++.+.+ ++.+|+++++. ++|.+.+
T Consensus 111 Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~t~~viv~~~~-~~G~~~~ 176 (398)
T cd00613 111 VLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSE-------------EVAALMVQYPN-TLGVFED 176 (398)
T ss_pred EEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCC-------------CeEEEEEECCC-CCceecc
Confidence 9999999999988888777 888888765 56777766632 34566666654 7898887
Q ss_pred -hHHHHHHHHHcCcEEEEEccccccc-ccCCCCccccccCCCCCCccEEEcccccccCC-----cc-eEEEeCHHHHHHH
Q 046230 259 -FPEIIAICKKYKAYIYLDEAHSIGA-VGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-----CG-GYIAGSKELIQYL 330 (489)
Q Consensus 259 -l~~i~~l~~~~~~~li~DEa~s~g~-~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-----~G-G~i~~~~~~~~~l 330 (489)
+++|+++|++||+++|+|++|+.+. .++.+ . .++|++++|++|++++ +| |+++.++++++.+
T Consensus 177 ~l~~i~~la~~~g~~livD~~~~~~~~~~~~~-----~-----~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~ 246 (398)
T cd00613 177 LIKEIADIAHSAGALVYVDGDNLNLTGLKPPG-----E-----YGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFL 246 (398)
T ss_pred hHHHHHHHHHhcCCEEEEEeccccccCCCChH-----H-----cCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhC
Confidence 4999999999999999999987432 11111 1 1349999999999822 23 8899988887764
Q ss_pred HhhC---------------------------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHH
Q 046230 331 KYTC---------------------------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRS 383 (489)
Q Consensus 331 ~~~~---------------------------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 383 (489)
.... .+..+..+.++..++++.++++.+. ....++..++++++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~----~~g~~~~~~~~~~~~~~l~~ 322 (398)
T cd00613 247 PGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG----PEGLKEIAERAHLNANYLAK 322 (398)
T ss_pred CCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHH
Confidence 2110 0001112255667777777777652 22456778999999999999
Q ss_pred HHHhCCCeee-CCCCCCeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 384 ELQKMGFEVL-GDNDSPVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 384 ~L~~~g~~v~-~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
+|++++.... .......+.+.+.. .....++++.|+++||.+.... +.+.+.+|++|+..+|++|||+++++|
T Consensus 323 ~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~----~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 323 RLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY----LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred HHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc----cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 9999865431 11112223333332 2346789999999999875321 234578999999999999999999864
No 180
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.95 E-value=4.9e-25 Score=225.82 Aligned_cols=337 Identities=16% Similarity=0.145 Sum_probs=226.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCC--CCCCcccCCCcchhHHHHHHHHHHHh------C-CCCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSP--STCSSRVDGGTLMVHNELEECVARFV------G-KPAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~------g-~~~~i~~~s 169 (489)
+..++||+.++ ..++ .++.+.+++.+.+.+... ....+....|. .+|++.+|+++ + .++.|++++
T Consensus 33 ~~~~i~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~----~~LR~aia~~~~~~~g~~~~~~~I~it~ 106 (409)
T PRK07590 33 EAKIIRLGIGD-VTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGY----DFLREKIAENDYQARGCDISADEIFISD 106 (409)
T ss_pred CCceEEecCcC-CCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCC----HHHHHHHHHHHHHhcCCcCChhhEEECC
Confidence 45688887543 2222 246778888888776321 11111122233 78888888875 2 247888999
Q ss_pred cHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCe-----------EEEecCCCHHHHHHHHHHHHhcCCCCCCCC
Q 046230 170 GYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGAT-----------IRVFQHNTPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 170 G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~-----------~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
|+.....++..+..+||.|+++.|+|..+...++..|.. ++.++.+.-+.++..+.+ +
T Consensus 107 Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-----------~ 175 (409)
T PRK07590 107 GAKCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-----------E 175 (409)
T ss_pred CHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc-----------c
Confidence 988764444566789999999999999999999998886 677765311111111111 1
Q ss_pred CccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccC
Q 046230 239 WKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFG 314 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g 314 (489)
..++++++ +.++++|.+.+ +++|+++|++||++||+||+|. .+-..+........++. .+..|+++||||.+|
T Consensus 176 ~~k~i~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~--~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 252 (409)
T PRK07590 176 KVDIIYLC-FPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE--AFISDPSLPHSIYEIEGARECAIEFRSFSKTAG 252 (409)
T ss_pred CceEEEEe-CCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch--hhccCCCCCcchhhCCCcccceEEEecCccccC
Confidence 34555555 77899999876 6788889999999999999999 65444322111222322 123588899999999
Q ss_pred Ccc---eEEEeCHHHHHHH-----------HhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHH
Q 046230 315 SCG---GYIAGSKELIQYL-----------KYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNF 380 (489)
Q Consensus 315 ~~G---G~i~~~~~~~~~l-----------~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.+| ||+++++++++.+ ........+ .+.+.+.+.++.++++. ....+.++.++.++++.+.
T Consensus 253 ~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~----~~~~~~~~~~~~~~~~r~~ 327 (409)
T PRK07590 253 FTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKF-NGVSYIVQRAAEAVYSP----EGKAQIKELIDYYMENAKI 327 (409)
T ss_pred CcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcc-cCcCHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHH
Confidence 779 9999999988732 111111111 12566666666565531 0112556778888999999
Q ss_pred HHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 381 FRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 381 l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
+.+.|++.|+.+..+.+++++++.+.......++.+.|++ +||.+.+.... .+.+.+++||++ ..+++++++++++
T Consensus 328 l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~--~~~~~~l~~~l~r 404 (409)
T PRK07590 328 IREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGF-GPSGEGYFRLSA--FGSRENVLEAMER 404 (409)
T ss_pred HHHHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHh-CCCCCCEEEEEc--cCCHHHHHHHHHH
Confidence 9999999988776666788888888765566788888875 59999874322 233457999996 4689999999999
Q ss_pred HHHH
Q 046230 460 ISRV 463 (489)
Q Consensus 460 l~~~ 463 (489)
|.++
T Consensus 405 l~~~ 408 (409)
T PRK07590 405 IKKA 408 (409)
T ss_pred HHhh
Confidence 9765
No 181
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=1.5e-24 Score=221.15 Aligned_cols=327 Identities=17% Similarity=0.151 Sum_probs=227.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C----C-C-CEEEeC
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G----K-P-AAIVFG 168 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~-~-~~i~~~ 168 (489)
|+.++||+.+.. .++ .++.+.+++.+.+... ..+....|. .+|++.+|+++ + . + +.++++
T Consensus 27 ~~~~i~l~~~~p-~~~-~~~~~~~a~~~~~~~~----~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 27 SKPPIALSIGEP-KHP-TPAFVLEALRENLHGL----STYPTTKGL----PELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred CCCeEEecCCCC-CCC-CCHHHHHHHHHHhhcc----CCCCCCCCC----HHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 678999975432 222 1355666666654321 111112233 67888888876 2 2 2 468888
Q ss_pred ccHHHH-HHhHhhhcCCCCE--EEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCC
Q 046230 169 MGYVTN-SAILPVLMRKGSL--IISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 169 sG~~a~-~~~~~al~~~g~~--Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
+|++.. ..++.+++++|+. |+++.|+|..+...++..|++++.++.+ |++++++.+.+
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------ 164 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR------------ 164 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh------------
Confidence 887665 7788888999985 9999999999888888899999888753 56777776643
Q ss_pred CccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC--cc--c---cccCCCCCCccEEEcc
Q 046230 239 WKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR--GV--C---ELLEVDTADVDIMMGT 308 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~--~~--~---~~~~v~p~~~Di~~~t 308 (489)
+.+++++ .+.+|++|.+.+ +++|+++|++|+++||+||+|. .+...+. .. . ...+.+..+..|+++|
T Consensus 165 ~~k~i~l-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 165 RCQLLFV-CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS--ELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred cceEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh--hcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 2455554 577999998877 7899999999999999999998 5543321 11 1 1111111223588999
Q ss_pred cccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 309 FTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
|||.++.+| ||+++++++++.+....... +.+.+++.+.++.+++.. ....++.++.++++.+.+.+.|
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~L 313 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAEILKAFLRYRTYH--GCAMPIPTQLASIAAWND------EQHVRENRALYREKFAAVLEIL 313 (393)
T ss_pred chhhcCCcccceEEEecCHHHHHHHHHHHHhh--ccCcCHHHHHHHHHHhcC------hHHHHHHHHHHHHHHHHHHHHH
Confidence 999998889 99999999998887654322 223667777776666531 1245677888888889999999
Q ss_pred HhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCC-----cCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPA-----TPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 386 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~-----~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++. +.+..+.+++++++.+. ....+++++|++ +||.+.|..+.. .+.+.+++||+++ .+++++++++++
T Consensus 314 ~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~ 388 (393)
T TIGR03538 314 GQV-LDLELPDAGFYLWPKVP--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV--APLEECVEAAER 388 (393)
T ss_pred Hhh-CcccCCCeeEEEEEECC--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec--CCHHHHHHHHHH
Confidence 875 44445667777777765 345778888865 699999854322 1234579999995 478999999999
Q ss_pred HHHH
Q 046230 460 ISRV 463 (489)
Q Consensus 460 l~~~ 463 (489)
|.+.
T Consensus 389 l~~~ 392 (393)
T TIGR03538 389 IRSF 392 (393)
T ss_pred HHHh
Confidence 9764
No 182
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=1.2e-24 Score=228.92 Aligned_cols=338 Identities=14% Similarity=0.113 Sum_probs=228.5
Q ss_pred CccceeEecccccc--cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh------CC-CCEEEe
Q 046230 97 NKVNRCLNLGSYNY--LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV------GK-PAAIVF 167 (489)
Q Consensus 97 ~~g~~~id~~s~~~--lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~-~~~i~~ 167 (489)
..|+.+|||+.++. +++.. ++.+.+++.+++... ..+ +......+|++.+|+++ +. ++.|++
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~~-p~~~~~~~~~~~~~~-~~Y-------~~~~G~~~lReaia~~~~~~~~~~~~~~~I~i 213 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFRT-PDEVVYDMAQQLTDT-EGY-------SDSKGLFSARKAIMQYAQLKGLPNVDVDDIYT 213 (517)
T ss_pred HcCCCeEEecCcCCCcCCCCC-CHHHHHHHHHHhhcC-CCC-------CCCcChHHHHHHHHHHHHhcCCCCCChhHEEE
Confidence 45788999975433 45542 467888888777542 111 12223478889999887 22 467888
Q ss_pred CccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 168 GMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 168 ~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
++|+... ..++.++.++||.|+++.|+|..+...+...|++++.++.+ |++++++.+.. +
T Consensus 214 t~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~ 281 (517)
T PRK13355 214 GNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS------------R 281 (517)
T ss_pred eCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc------------C
Confidence 8887665 77788899999999999999999999999999998877542 67777776643 3
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC 316 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~ 316 (489)
.++++++ +.+|++|.+.+ +++|+++|++||++||+||+|. .|-..|..........++..-|+++||||.++.+
T Consensus 282 ~k~i~i~-nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~--~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~ 358 (517)
T PRK13355 282 TKAIVII-NPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD--RLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIA 358 (517)
T ss_pred ceEEEEE-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh--hhcCCCCCcccHHHhCCCCeEEEEecchhhccCc
Confidence 4555554 56899999977 8999999999999999999998 6655443222222233332235569999999988
Q ss_pred c---eEEEe--CHHH----HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 317 G---GYIAG--SKEL----IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 317 G---G~i~~--~~~~----~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
| ||++. ++++ ++.+..... ..+ +.+.+.+.++.++|+-.. .......+ ..++.++.+++.+.|++
T Consensus 359 G~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~--~~~~~~q~a~~~aL~~~~--~~~~~~~~-~~~~~~~r~~l~~~L~~ 432 (517)
T PRK13355 359 GYRIGWMILSGNKRIAKDYIEGLNMLAN-MRL--CSNVPAQSIVQTALGGHQ--SVKDYLVP-GGRVYEQRELVYNALNA 432 (517)
T ss_pred ccceEEEEeeCchhhHHHHHHHHHHHhc-CcC--CcChHHHHHHHHHhcCCc--cHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 9 99984 4543 444432221 112 256667777777764100 00001122 23455667889999998
Q ss_pred C-CCeeeCCCCCCeEEEEeCCC----CcHHHHH-HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 388 M-GFEVLGDNDSPVMPIMLYNP----AKIPAFS-RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 388 ~-g~~v~~~~~~~~~~~~~~~~----~~~~~~~-~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
+ |+.+..+.+++++++.+... ....+++ +.|.++||.+.+..... ..+.+++|+++ ..++++|++++++|.
T Consensus 433 ~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~-~~~~~~~Ris~--~~~~~~l~~a~~rl~ 509 (517)
T PRK13355 433 IPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFN-WDKPDHFRVVY--LPRLEDLEDAMDRLA 509 (517)
T ss_pred CCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhC-CCCcCEEEEEe--CCCHHHHHHHHHHHH
Confidence 8 88887777777666555421 1234555 45666799999743221 23467999999 578999999999999
Q ss_pred HHHHHh
Q 046230 462 RVGDLV 467 (489)
Q Consensus 462 ~~~~~~ 467 (489)
++++..
T Consensus 510 ~~~~~~ 515 (517)
T PRK13355 510 DFFSYY 515 (517)
T ss_pred HHHHHh
Confidence 988754
No 183
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=9.2e-25 Score=222.43 Aligned_cols=331 Identities=14% Similarity=0.167 Sum_probs=226.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C---CCCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G---KPAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g---~~~~i~~~sG~ 171 (489)
+..+++|..++. .++ .++.+.+++.+.+...... + +......+|++.+|+++ | .++.+++++|+
T Consensus 29 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~---Y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~ 99 (388)
T PRK07337 29 GRDIIHMGIGEP-DFT-APEPVVEAAARALRRGVTQ---Y----TSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGA 99 (388)
T ss_pred CCCEEEeCCcCC-CCC-CCHHHHHHHHHHHhcCCCC---C----CCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCc
Confidence 455778763321 122 1356778877776542111 1 11222377888888886 3 23556666665
Q ss_pred HH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+. ...++.++.++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. +.+ +
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~-~ 166 (388)
T PRK07337 100 SAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE------------RTR-G 166 (388)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc------------cce-E
Confidence 54 477778889999999999999999988888889998887753 45666665543 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
|++...++++|...+ +++|+++|+++++++|+||+|. .+...+.. .......+ + -|+++||||.||.+|
T Consensus 167 v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~-~~~~~~~~-~-vi~~~S~SK~~~~~G~Ri 241 (388)
T PRK07337 167 VLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ--GLSYDAAP-VSALSLGD-D-VITINSFSKYFNMTGWRL 241 (388)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc--ccccCCCC-cChhhccC-C-EEEEEechhhcCCchhhe
Confidence 455667899998866 7889999999999999999998 66554432 11122222 1 367899999999878
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-eCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV-LGDN 396 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v-~~~~ 396 (489)
||+++++++++.+......+.. +.+++.+.++.++++- + ......+.++.++++.+++.+.|+++|+.+ ..+.
T Consensus 242 G~~~~~~~l~~~l~~~~~~~~~--~~s~~~q~~~~~~l~~--~--~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~ 315 (388)
T PRK07337 242 GWLVVPEALVGTFEKLAQNLFI--CASALAQHAALACFEP--D--TLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPD 315 (388)
T ss_pred eeeecCHHHHHHHHHHHHHhcc--CCChHHHHHHHHHhcc--C--chHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 9999999999988765543322 2566666666666531 0 111346677888899999999999988764 3455
Q ss_pred CCCeEEEEeCCC-----CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNP-----AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 397 ~~~~~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+++++++.+... ....+++++|+ ++||.+.+......+.+.+++|++++. +++++++++++|.+++
T Consensus 316 ~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 316 GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 677777777531 35667887765 569999974332222345799999963 6899999999987754
No 184
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.95 E-value=1.9e-24 Score=216.54 Aligned_cols=329 Identities=19% Similarity=0.191 Sum_probs=221.7
Q ss_pred ecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------C-CEEEeCccHHHHH
Q 046230 104 NLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------P-AAIVFGMGYVTNS 175 (489)
Q Consensus 104 d~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~-~~i~~~sG~~a~~ 175 (489)
|+++++ ..+... |....++.+ ..++.....+....|. .++++.++++++. . ..++.++|++++.
T Consensus 2 ~~~~~~-~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 2 DLSIGE-PDFPPP-PEVLEALAA--AALRAGLLGYYPDPGL----PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCC-CCCCCC-HHHHHHHHH--HhhccCCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 454333 244433 455555544 2333333333333333 6677777777653 2 3444466667778
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHH---HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHL---EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~L---e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
.++.++.++|+.|+++.+.|.++...++..|..++.++.++...+ ++.++.... ..+.+|++++++++
T Consensus 74 ~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------~~~~~v~i~~~~~~ 144 (350)
T cd00609 74 LLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT---------PKTKLLYLNNPNNP 144 (350)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC---------ccceEEEEECCCCC
Confidence 889999999999999999999999999999999888877622111 122222111 24456666679999
Q ss_pred CCCCCChH---HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCH-H
Q 046230 253 EGELCKFP---EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK-E 325 (489)
Q Consensus 253 ~G~~~~l~---~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~-~ 325 (489)
+|.+.+++ +|+++|+++|+++|+||+|+ ++...+............+.|++++|++|+++.+| |++++++ +
T Consensus 145 tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~ 222 (350)
T cd00609 145 TGAVLSEEELEELAELAKKHGILIISDEAYA--ELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEE 222 (350)
T ss_pred CCcccCHHHHHHHHHHHHhCCeEEEEecchh--hceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHH
Confidence 99998754 55589999999999999999 44443333211122333455899999999998445 9999998 8
Q ss_pred HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-eCCCCCCeEEEE
Q 046230 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV-LGDNDSPVMPIM 404 (489)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v-~~~~~~~~~~~~ 404 (489)
+++.+........ ...++..+.++..+|+... ...++..+++.++.+++++.|++.+... .....+.++++.
T Consensus 223 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~ 295 (350)
T cd00609 223 LLERLKKLLPYTT--SGPSTLSQAAAAAALDDGE-----EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLD 295 (350)
T ss_pred HHHHHHHHHHhcc--cCCChHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEe
Confidence 8888877655432 3367777777777776541 2567788899999999999999986544 334445555655
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
+........+.+.|.++||.+.+..++.. ...+++|++++.. ++|+++++++|+
T Consensus 296 ~~~~~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 296 LPEGDDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred cCCCChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 55443455667777777999986443321 3567999999755 999999999986
No 185
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2.1e-24 Score=215.02 Aligned_cols=281 Identities=20% Similarity=0.250 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 148 HNELEECVARFVGKP-AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
..+|++++|++++.+ +.|++++|++.. ..++. +.+++++|+. .|+|..+...++..|++++.++.++.+...+.++
T Consensus 42 ~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~ 119 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGNIIIV-EPNFNEYKGYAFTHGIRISALPFNLINNNPEILN 119 (332)
T ss_pred HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCcEEEe-CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHh
Confidence 489999999999974 678889998876 44444 5677765555 8999999999999999999988753221233333
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCC
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTAD 301 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~ 301 (489)
.. +.++++++ +.++++|.+.+ +++|+++|+++|++||+||+|. .|...+.. ...... ..+
T Consensus 120 ~~-----------~~k~v~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~--~~~~~~~~~~~~~~~--~~~ 183 (332)
T PRK06425 120 NY-----------NFDLIFIV-SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI--DFVPNRAEEDVLLNR--SYG 183 (332)
T ss_pred hc-----------CCCEEEEe-CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh--ccccccchhHHHHhc--cCC
Confidence 21 24555555 78999999877 6788888999999999999998 66544321 111111 112
Q ss_pred ccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
..|+++||||++|.+| ||+++++++++.+......+ . .+.+++++ +...+. ....++.++.++++.
T Consensus 184 ~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~--~--~~~~~~~~-l~~~~~------~~~~~~~~~~~~~~r 252 (332)
T PRK06425 184 NVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW--S--VCDPAIDF-IRSIDL------DYVAKHSLDIMENER 252 (332)
T ss_pred CEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC--c--cCHHHHHH-HHHhhh------HHHHHHHHHHHHHHH
Confidence 3589999999999779 99999999999988754432 2 34433322 222211 113356788889999
Q ss_pred HHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHH
Q 046230 379 NFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 379 ~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
+++.+.|+++|+.+..+..+.++++.+. ...++.+.|+++||.+.+..... +.+.+++||++ -++++.+++++
T Consensus 253 ~~l~~~L~~~g~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~-~~~~~~iRis~---~~~~~~~~l~~ 325 (332)
T PRK06425 253 SYLINNLEAMGFRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYE-CLGEQYIRIAI---RRRSFNIKLVN 325 (332)
T ss_pred HHHHHHHHHCCCEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCC-CCCCCEEEEEe---CCHHHHHHHHH
Confidence 9999999999988764456666666654 56789999999999999743221 23457999998 46899999999
Q ss_pred HHHHHH
Q 046230 459 VISRVG 464 (489)
Q Consensus 459 ~l~~~~ 464 (489)
+|++++
T Consensus 326 al~~~~ 331 (332)
T PRK06425 326 ALRNFL 331 (332)
T ss_pred HHHHHh
Confidence 998764
No 186
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=7.4e-26 Score=217.60 Aligned_cols=330 Identities=20% Similarity=0.268 Sum_probs=240.8
Q ss_pred cCCCCC--CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC----CCEEEeCccHHH-HHHhHhhhcC
Q 046230 111 LGFAAS--DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK----PAAIVFGMGYVT-NSAILPVLMR 183 (489)
Q Consensus 111 lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a-~~~~~~al~~ 183 (489)
-|+++. |..+.+++++.+... ....+...+|..++...|+++++++.|. ++.|++|+|... ...++.++++
T Consensus 38 qGfp~~~~P~fv~ea~~~~~~~~--~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 38 QGFPDFPPPKFVTEAAKNAAKEP--STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred CCCCCCCCcHHHHHHHHHHhccc--hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 445443 445667777766653 2223334557888888888888887775 467888777654 5779999999
Q ss_pred CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 184 KGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 184 ~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
+||.|++.+|+|.++....++.|+.++.++.+ |+++||.++.+ ++.+|++.+.+
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-------------kTk~Ii~ntPh 182 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-------------KTKAIILNTPH 182 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC-------------CccEEEEeCCC
Confidence 99999999999999999999999988877654 88999998876 34466677888
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccC-CCCCCccEEEcccccccCCcc---eEEEeC
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLE-VDTADVDIMMGTFTKSFGSCG---GYIAGS 323 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~-v~p~~~Di~~~t~sK~~g~~G---G~i~~~ 323 (489)
|++|.+.+ |++|+++|++||.++|.||||. .+-.+|.-.+.... -...++.|.++|+||+||.+| ||++++
T Consensus 183 NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe--~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp 260 (420)
T KOG0257|consen 183 NPTGKVFSREELERIAELCKKHGLLVISDEVYE--WLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP 260 (420)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhH--HHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech
Confidence 99999866 8999999999999999999999 66666652111222 223566799999999999999 999999
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc--cCC-CchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCe
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG--EDG-SSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPV 400 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~ 400 (489)
+.++..+........++ .+.+.+.|..+++..=.. ..+ .....++.+.++++.+.+.+.|.++|+++.++.++++
T Consensus 261 ~~L~~~~~~vh~~~~~~--~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayy 338 (420)
T KOG0257|consen 261 KHLYSALFPVHQNFVFT--CPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYY 338 (420)
T ss_pred HHhhhhHHHHhhccccc--cCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceE
Confidence 99999888777666666 444444444444432211 001 1244568899999999999999999999999999998
Q ss_pred EEEEeCCCC------------cHHHHHHHHhhC-CceEEeec-CCCcC---CCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 401 MPIMLYNPA------------KIPAFSRECLRQ-NVAVVTVA-FPATP---LLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 401 ~~~~~~~~~------------~~~~~~~~l~~~-Gi~v~~~~-~p~~~---~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
++..+.... ..-.+++.+.++ |+.+.|.. |...+ ...+.+|+|+ .-+++-++.+.+.|+
T Consensus 339 l~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~--~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 339 LWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF--CKADETLRKAIERLK 414 (420)
T ss_pred EEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHH--HhhHHHHHHHHHHHh
Confidence 888876211 122567777776 88888732 22111 1245778877 567777777777776
No 187
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=1e-24 Score=222.74 Aligned_cols=336 Identities=14% Similarity=0.096 Sum_probs=228.2
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (489)
|+.+|||+.+... .++. ++.+.+++.+.+..... . ++......+|++.++++++. ++.+++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p-~~~~~~~~~~~~~~~~~---~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQP-PEHMKEAYCRAIKEGHN---Y----YGPSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred CCCeEEEeCCCCCcCCCCC-CHHHHHHHHHHHHcCCC---C----CCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 6779999855442 3432 46778888777754211 1 11223337888999988732 35677777
Q ss_pred cHH-HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEe-cCC------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYV-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVF-QHN------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~-a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~-~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|++ ++..++.+++++||.|+++.++|..+...++..|+.++.+ +.+ |.+++++.+.. +.+
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 168 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE------------KTK 168 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc------------ceE
Confidence 654 5588888889999999999999999998888888887776 221 45666665532 234
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++ +.+.+|++|...+ +++|+++|+++|+++|+||+|. .+-..+... ....+++....|+++||||.++.+|
T Consensus 169 ~v~-l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~--~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~Gl 244 (398)
T PRK08363 169 AIA-VINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD--LMTYEGKHV-SPGSLTKDVPVIVMNGLSKVYFATGW 244 (398)
T ss_pred EEE-EECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh--hhccCCccc-CHHHcCcCCcEEEEecchhccCCccc
Confidence 444 4577899998877 8999999999999999999998 443333221 1122222223588899999998878
Q ss_pred --eEEEe--CHHHHHHHHhhCCCc-ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 046230 318 --GYIAG--SKELIQYLKYTCPAH-LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE 391 (489)
Q Consensus 318 --G~i~~--~~~~~~~l~~~~~~~-~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 391 (489)
||+++ ++++++.+....... ....+.+.+...++.++|.. .....++.+++++++.+++.+.|+++ ++.
T Consensus 245 RiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 245 RLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG-----PMDYLEEYMKKLKERRDYIYKRLNEIPGIS 319 (398)
T ss_pred eEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 99987 666666554321110 01122666677766666642 12356777888999999999999988 777
Q ss_pred eeCCCCCCeEEEEeCCC--CcHHHHH-HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 392 VLGDNDSPVMPIMLYNP--AKIPAFS-RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 392 v~~~~~~~~~~~~~~~~--~~~~~~~-~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+..+.+++++++.+... ....+++ +.|.++||.+.+..... ..+.+++|+++ ..+++++++++++|.+++++
T Consensus 320 ~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~--~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 320 TTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFG-EYGAGHFRLVF--LPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred ecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHH
Confidence 66666666666555431 2344554 44567799999743222 23457999999 36799999999999988765
No 188
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.4e-24 Score=220.10 Aligned_cols=323 Identities=19% Similarity=0.229 Sum_probs=227.5
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCC--CcccCCCcchhHHHHHHHHHHHhCCC--CEEEe-CccHHHHHHhHhhhcC--
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTC--SSRVDGGTLMVHNELEECVARFVGKP--AAIVF-GMGYVTNSAILPVLMR-- 183 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~-~sG~~a~~~~~~al~~-- 183 (489)
-+.+..++.+.+++.+.++++..... .........+...++++.++++++.+ +.+++ +++++++..++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 34444467888888888866532211 11111123456678999999999965 45555 5556676777777766
Q ss_pred -CCCEEEEcCCCchHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 184 -KGSLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 184 -~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+|+.|++..+.|++... .++..|++++.++.+ |++++++.+.+ +..+|++..+.+++
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~~~t 152 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-------------RTKLVAVTHVSNVL 152 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-------------CceEEEEeCccccc
Confidence 89999999999988532 334668888888765 77888887754 34567778888899
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHh
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKY 332 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~ 332 (489)
|.+.|+++|.++|+++|++|++|++|+.|.+. +++...++|+++.|++|++++.| |+++.++++++.++.
T Consensus 153 G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~ 223 (373)
T cd06453 153 GTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---------VDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPP 223 (373)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---------eeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCC
Confidence 99999999999999999999999999855331 11212245899888889998777 999999998887764
Q ss_pred hCCCc------------------ccc-cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046230 333 TCPAH------------------LYA-TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV 392 (489)
Q Consensus 333 ~~~~~------------------~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v 392 (489)
...+. .+. .+.+.....+..++++.+... ..+++.++.+++.+++++.|+++ ++.+
T Consensus 224 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~----g~~~~~~~~~~~~~~l~~~l~~~~~~~~ 299 (373)
T cd06453 224 YGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKI----GMEAIAAHEHELTAYALERLSEIPGVRV 299 (373)
T ss_pred eecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 32111 011 124444555666677776321 34677888899999999999998 6777
Q ss_pred eCC--CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 393 LGD--NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 393 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
..+ ..++++++.+.. ....++.+.|.++||.+....++..+ ...+.+|++++..+|++|+|+++++|
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 300 YGDAEDRAGVVSFNLEG-IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred eCCccccCCeEEEEECC-cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 643 235666666543 35678999999999998754332211 12468999999999999999999864
No 189
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.94 E-value=4.6e-24 Score=212.25 Aligned_cols=302 Identities=15% Similarity=0.164 Sum_probs=215.1
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
.++|||++| |+++.+. +.+.+ ..+..|+.. . .+|++.+|++++.+ .|++++|++....++
T Consensus 20 ~~~i~l~~ne~p~~~~~--~~~~~---~~~~~yp~~---------~----~~Lr~~ia~~~~~~-~I~it~Gs~~al~~~ 80 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPV--PAIPA---DAWARLPET---------D----DGLEAAARAYYGAP-QLLPVAGSQAAIQAL 80 (330)
T ss_pred HHheeecCCcCCCCCCC--cccCH---HHHHhCCCC---------h----HHHHHHHHHHhCCC-CEEECcCHHHHHHHH
Confidence 357999877 7776662 22322 344455421 1 68999999999875 677888887763333
Q ss_pred hhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 179 PVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 179 ~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
. ...+||.|+++.|+|..+...++..|++++.++.+ ++++.+.. .++++++ +.+||+|.+.+
T Consensus 81 ~-~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~~-------------~~~v~l~-nP~NPTG~~~s 142 (330)
T PRK05664 81 P-RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---EVEAALDS-------------LDVLVVV-NPNNPTGRRFD 142 (330)
T ss_pred H-HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh---hHhhhhcC-------------CCEEEEe-CCcCCCCCccC
Confidence 2 45799999999999999999999999999988653 45544432 3445555 44699999977
Q ss_pred ---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHh
Q 046230 259 ---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKY 332 (489)
Q Consensus 259 ---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~ 332 (489)
+++|+++|+++|++||+||+|. .+.+. ... ..+.+.+.-|+++||||++|.+| ||+++++++++.+..
T Consensus 143 ~~~l~~l~~~~~~~~~~iI~DE~y~--~~~~~-~s~---~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~ 216 (330)
T PRK05664 143 PARLLAWHARLAARGGWLVVDEAFM--DNTPQ-HSL---AACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAE 216 (330)
T ss_pred HHHHHHHHHHHHhcCCEEEEECCcc--cCCCc-ccc---cccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHH
Confidence 6677777899999999999997 44321 112 22223333588999999999779 999999999999887
Q ss_pred hCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHH
Q 046230 333 TCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412 (489)
Q Consensus 333 ~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~ 412 (489)
.... ++ .+.+.+.++.++|+.. ...+..++++.++.+++.+.|++.|+... ++..+.+++..+ ...
T Consensus 217 ~~~~--~~--~~~~~~~~~~~~L~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~---~~~~~f~~~~~~-~~~ 282 (330)
T PRK05664 217 LLGP--WT--VSGPTRWLAQAALADT------PWQRRQRERLLAASQRLAALLRRHGLTPA---GGCALFQWVRTE-DAA 282 (330)
T ss_pred hcCC--CC--CCHHHHHHHHHHHhCh------HHHHHHHHHHHHHHHHHHHHHHHCCCccc---CCcceEEEEecC-CHH
Confidence 6543 22 5666677777777532 14466788889999999999999886432 232233333333 567
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
++.+.|.++||.+..++ ..+++||+++. +++++++++++|+++.++
T Consensus 283 ~~~~~l~~~gi~v~~f~------~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 283 ALHEFLARRGILTRLFE------QPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHCCeEEEECC------CCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 89999999999998532 23689999853 788899999999877654
No 190
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=1.5e-24 Score=222.23 Aligned_cols=335 Identities=16% Similarity=0.157 Sum_probs=233.7
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCC--CCCcccCCCcchhHHHHHHHHHHHhCC--CCEEEeCccHHH-H
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPS--TCSSRVDGGTLMVHNELEECVARFVGK--PAAIVFGMGYVT-N 174 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~--~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a-~ 174 (489)
.-|+|-++ .+..++.+.+++.+.+.++... .+......-..+...++++.+|++++. ++.+++++|++. +
T Consensus 24 ~iYld~a~-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l 98 (406)
T PRK09295 24 LAYLDSAA-----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGI 98 (406)
T ss_pred eEEEeCcc-----cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHH
Confidence 45666542 2223567888888888753221 111110111245567899999999986 367777776655 4
Q ss_pred HHhHhh----hcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 175 SAILPV----LMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 175 ~~~~~a----l~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
..++.+ ..++|+.|++..+.|++... .++..|++++.++.+ |+++|++++.+ ++
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~t 165 (406)
T PRK09295 99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE-------------RT 165 (406)
T ss_pred HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC-------------Cc
Confidence 555554 45789999999999877533 335568888888754 67788777643 34
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i 320 (489)
.+|++..+.+++|.+.|+++|.++|+++|+++++|++|++|.. ..++...++|+++.|++|.+|+.| |++
T Consensus 166 ~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~---------~~~~~~~~~D~~~~s~~K~~gp~G~G~l 236 (406)
T PRK09295 166 RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH---------PVDVQALDCDFYVFSGHKLYGPTGIGIL 236 (406)
T ss_pred EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc---------ccCchhcCCCEEEeehhhccCCCCcEEE
Confidence 5667778899999999999999999999999999999986532 223333456999999999889888 999
Q ss_pred EeCHHHHHHHHhhCCC-------------------ccc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHH
Q 046230 321 AGSKELIQYLKYTCPA-------------------HLY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNF 380 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~-------------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
+.++++++.+.....+ ..| ..+.+....+++.++++.+... ..+...++.+++.++
T Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~~ 312 (406)
T PRK09295 237 YVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSAL----GLNNIAEYEQNLMHY 312 (406)
T ss_pred EEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 9999887765321110 001 1146677888888899887421 346677888899999
Q ss_pred HHHHHHhC-CCeeeCCC-CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHH
Q 046230 381 FRSELQKM-GFEVLGDN-DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDL 453 (489)
Q Consensus 381 l~~~L~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edi 453 (489)
+++.|+++ ++.+.++. ..+++.+.+.. ....++.+.|.++||.+........+ ...+.+|++++..+|++||
T Consensus 313 l~~~l~~~~~~~~~~~~~~~~iv~~~~~~-~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~di 391 (406)
T PRK09295 313 ALSQLESVPDLTLYGPQNRLGVIAFNLGK-HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEV 391 (406)
T ss_pred HHHHHhcCCCEEEeCCCCCceEEEEEECC-cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHH
Confidence 99999988 67776542 35566665543 34567888888889999753222211 1135799999999999999
Q ss_pred HHHHHHHHHHHHH
Q 046230 454 IKALEVISRVGDL 466 (489)
Q Consensus 454 d~~l~~l~~~~~~ 466 (489)
|+++++|+++..-
T Consensus 392 d~l~~~l~~i~~~ 404 (406)
T PRK09295 392 DRLVAGLQRIHRL 404 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987553
No 191
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=2.3e-24 Score=218.25 Aligned_cols=318 Identities=14% Similarity=0.085 Sum_probs=224.9
Q ss_pred CCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhhcC----CCCEEE
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILPVLMR----KGSLII 189 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al~~----~g~~Vl 189 (489)
.+|.+.+++.+++...... +....+....+.++++.+++++|.+ ..+++++|++++..++.++.. +++.|+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl 108 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGD---PGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV 108 (371)
T ss_pred chHHHHHHHHHHHhcCCCC---cccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence 3688889998888763211 1122355666789999999999975 346668889998777766543 578899
Q ss_pred EcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHH
Q 046230 190 SDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264 (489)
Q Consensus 190 ~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~ 264 (489)
++...|.++...++..|.+++.++.+ |+++|++.+.+ ..+.++++. ..+++|.+.|+++|.+
T Consensus 109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------------~~~~vi~~~-~~~~tG~~~~l~~I~~ 175 (371)
T PRK13520 109 VPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD------------NTIGIVGIA-GTTELGQVDPIPELSK 175 (371)
T ss_pred ecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh------------CCEEEEEEc-CCcCCcccCCHHHHHH
Confidence 99999999988888889998888754 78999988865 233344444 4577899999999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc--ce-EEEeCHHHHHHHHhhCCCccc--
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC--GG-YIAGSKELIQYLKYTCPAHLY-- 339 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~--GG-~i~~~~~~~~~l~~~~~~~~~-- 339 (489)
+|+++|+++++|++|+.+.++..... ..+++....+|.+..+.+|+..++ +| +++.++++++.+.... .+..
T Consensus 176 l~~~~g~~livD~a~~~~~~~~~~~~--~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~-~~~~~~ 252 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIPFLDDP--PNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDT-PYLTSK 252 (371)
T ss_pred HHHHcCCCEEEEecchhHHHHhhcCC--CCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccC-ccccCC
Confidence 99999999999999984432211111 012222235688877888975421 25 4456777877764221 2211
Q ss_pred -----ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHH
Q 046230 340 -----ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAF 414 (489)
Q Consensus 340 -----~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 414 (489)
..+.++..++++.++|+.+. ....++++++..++++++++.|+++|+.+......+++.+.+. ...++
T Consensus 253 ~~~~~~gt~~~~~~~~~~~al~~l~----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v 325 (371)
T PRK13520 253 KQATLTGTRSGAGVAATYAVMKYLG----REGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDDP---NPDEV 325 (371)
T ss_pred CCcceEeeccChHHHHHHHHHhhhc----HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEecC---CHHHH
Confidence 11234456778888888762 2245678899999999999999999987333334555554443 46789
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.++|.++||.+.... ..+.+|++++..+|++|+++++++|+++++
T Consensus 326 ~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 326 REKLRERGWRVSVTR------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 999999999887422 236799998888999999999999998764
No 192
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=4.2e-24 Score=214.91 Aligned_cols=314 Identities=16% Similarity=0.220 Sum_probs=220.5
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC---EE-EeCccHHHHHHhHhhhcCCCCE-EEEcC
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPA---AI-VFGMGYVTNSAILPVLMRKGSL-IISDS 192 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i-~~~sG~~a~~~~~~al~~~g~~-Vl~~~ 192 (489)
-.+.+++.+++.+ ....... ...+...++++.++++++.+. .+ ++++|++++..++.++..+++. |+.+.
T Consensus 8 ~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~ 82 (355)
T TIGR03301 8 LSTSATVRDAMLV-DWCHWDS----EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN 82 (355)
T ss_pred CCCCHHHHHHhhh-hccCCCH----HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence 3455666666655 1111110 124667899999999999752 34 4578899998888888776665 55666
Q ss_pred CCchH-HHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH
Q 046230 193 LNHNS-IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC 266 (489)
Q Consensus 193 ~~h~~-~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~ 266 (489)
++|+. +...++..|.+++.++.+ |++++++.+++. .+..+++...+.+++|.+.|+++|.++|
T Consensus 83 ~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~~~~~~~~~G~~~~~~~i~~l~ 151 (355)
T TIGR03301 83 GAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD-----------PDITHVATVHHETTTGILNPLEAIAKVA 151 (355)
T ss_pred CchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhC-----------CCceEEEEEecCCcccchhHHHHHHHHH
Confidence 77765 344566778888877643 788898888652 1333454555667889999999999999
Q ss_pred HHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCCcc------
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPAHL------ 338 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~~~------ 338 (489)
++||+++|+|++|++|.. .+++...++|++++|++|++ |++| |++++++++++.+.....++.
T Consensus 152 ~~~~~~livD~~~s~g~~---------~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (355)
T TIGR03301 152 RSHGAVLIVDAMSSFGAI---------PIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQ 222 (355)
T ss_pred HHcCCEEEEEeccccCCc---------ccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHH
Confidence 999999999999986532 12222234599999999997 5667 999999999888763211110
Q ss_pred ---------cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCC-eEEEEeC
Q 046230 339 ---------YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSP-VMPIMLY 406 (489)
Q Consensus 339 ---------~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~-~~~~~~~ 406 (489)
+..+.++..+.++.++|+.+..+ +..++.+++++++.+++++.|+++|+.+..+. .++ ++++.+.
T Consensus 223 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~---g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 299 (355)
T TIGR03301 223 WAYMEKTGKWRFTPPTHTVYAFAQALEELEAE---GGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYP 299 (355)
T ss_pred HHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECC
Confidence 11136777777788888877321 12467888999999999999999998765432 233 3455554
Q ss_pred CC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 407 NP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 407 ~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.. ....++.++|.++||.+.+...+ ..+++||++...+|++|++++++.|+++
T Consensus 300 ~~~~~~~~~~~~~l~~~gi~i~~~~~~----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 300 DDPDFDFDDFYQELKERGFVIYPGKLT----LADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCcchHHHHHHHHHHCCEEEECCccc----cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 31 34468999999999999853221 1268999998789999999999999865
No 193
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=2.2e-24 Score=222.07 Aligned_cols=338 Identities=16% Similarity=0.150 Sum_probs=220.6
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C---CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K---PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~~i~~~s 169 (489)
|+.+++++..+.. ++. .++.+.+++.+.+.+ . ....+....|. .+|++.+|+++. . ++.|++++
T Consensus 31 g~~~~~~~~G~p~~~~~~-~p~~~~~a~~~~~~~-~-~~~~Y~~~~G~----~~LReaia~~~~~~~g~~~~~~~I~it~ 103 (433)
T PRK06855 31 GVKITWENIGDPIAKGEK-IPDWMKEIVAELVMD-D-KSYGYCPTKGV----LETREFLAELNNKRGGAQITPDDIIFFN 103 (433)
T ss_pred cccccccccCCCcccCCC-CCHHHHHHHHHHhhc-C-CCCCCCCCCCC----HHHHHHHHHHHHhccCCCCCHhHEEEcC
Confidence 5667777533321 222 245667777776644 1 11111122233 788888888863 2 35688888
Q ss_pred cHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHH-HhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 170 GYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGA-RGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 170 G~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~-~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
|+... ..++ .++.+||.|+++.|+|+.+.... ...|+.++.++.+ |+++|++.++.. +..
T Consensus 104 G~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~----------~~~ 172 (433)
T PRK06855 104 GLGDAIAKIY-GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN----------PSI 172 (433)
T ss_pred cHHHHHHHHH-HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC----------CCc
Confidence 87766 4444 47889999999999999865432 3457777666432 678888887631 123
Q ss_pred cEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc
Q 046230 241 KIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G 317 (489)
++++++ +.+|++|.+.+ +++|+++|++||++||+||+|. .+-..+........+.++...|+++||||.++.+|
T Consensus 173 ~~i~l~-~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~--~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 173 AGILLI-NPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN--NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred eEEEEE-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 445445 56899999876 7788999999999999999999 66554432222233333323489999999999779
Q ss_pred ---eEEEeC-----H---HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 318 ---GYIAGS-----K---ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 318 ---G~i~~~-----~---~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
||++++ + .+++.+..... ... +.+.+.+.++.+.|+- .......++.++.++++.+.+.+.|+
T Consensus 250 lRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~Q~a~~~~l~~---~~~~~~~~~~~~~~~~r~~~~~~~L~ 323 (433)
T PRK06855 250 SRCGWIEVYNADKDEVFKKYINSILNAKM-IEV--CSTTLPQMAIPRIMSH---PEYKNYLKERNKRYEKRSNIAYEKLK 323 (433)
T ss_pred ceEEEEEEeCCchhhHHHHHHHHHHHhhc-ccc--CCChHHHHHHHHhhcC---CcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999872 2 23343332222 112 2566666666666531 11122566778888999999999998
Q ss_pred hC-CCeeeCCCCCCeEEEEeCCCC---------------------------cHHHHHHH-HhhCCceEEeecCCCcCCCC
Q 046230 387 KM-GFEVLGDNDSPVMPIMLYNPA---------------------------KIPAFSRE-CLRQNVAVVTVAFPATPLLL 437 (489)
Q Consensus 387 ~~-g~~v~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~-l~~~Gi~v~~~~~p~~~~~~ 437 (489)
++ ++.+..+.+++++|+.+.... ...+++.. +.++||.+.|..... + ..
T Consensus 324 ~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~-~-~~ 401 (433)
T PRK06855 324 DVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC-T-EL 401 (433)
T ss_pred cCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC-C-CC
Confidence 87 777666777888887775421 23456655 456699999843222 2 22
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 438 ARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.+||+++. .+.++|++++++|.+++++
T Consensus 402 ~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 402 NGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 459999953 6899999999999999875
No 194
>PLN02656 tyrosine transaminase
Probab=99.94 E-value=2.3e-24 Score=220.70 Aligned_cols=336 Identities=12% Similarity=0.100 Sum_probs=228.6
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (489)
|+.+|||+-.+.- .....++.+.+++.+.+.+-.. ..+ +......++++.++++++. ++.+++++
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y----~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~ 103 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF--NGY----APTVGLPQARRAIAEYLSRDLPYKLSLDDVFITS 103 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCC--CCC----CCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 7889999743321 1111246777777777764111 111 1122237788888888742 35666766
Q ss_pred cHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|+.. ...++.+++++||.|+++.++|+.+.......|++++.++.+ |++++++.+.. ..+
T Consensus 104 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------------~~~ 171 (409)
T PLN02656 104 GCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ------------NTV 171 (409)
T ss_pred ChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc------------Cce
Confidence 6544 577788888999999999999998887888889998887652 56777766643 244
Q ss_pred EEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++ +.+.++++|.+. .+++|+++|++||++||+||+|. .+-..++.......++..+.-|+++||||.|+.+|
T Consensus 172 ~v~-l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 248 (409)
T PLN02656 172 ALV-IINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG--HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW 248 (409)
T ss_pred EEE-EECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh--hcccCCCCcccHHHhcccCcEEEEcccchhccCcce
Confidence 444 445588999885 58899999999999999999999 66554432111112222233588999999999889
Q ss_pred --eEEEeC--------HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 --GYIAGS--------KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 --G~i~~~--------~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
||++++ +++++.+...... .. +.+.+.+.++.++|+.- .....++.++.++++.+.+.+.|++
T Consensus 249 RiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~~s~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~L~~ 321 (409)
T PLN02656 249 RLGWFVTTDPSGSFRDPKIVERIKKYFDI-LG--GPATFIQAAVPTILEQT----DESFFKKTINILKQSSDICCDRIKE 321 (409)
T ss_pred eEEEEEEeCcccccccHHHHHHHHHHHhh-hc--CCCHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999983 5788887654332 12 25677777777777521 1224677788889999999999998
Q ss_pred CC-Ce-eeCCCCCCeEEEEeCCC-----CcHHHH-HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 388 MG-FE-VLGDNDSPVMPIMLYNP-----AKIPAF-SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 388 ~g-~~-v~~~~~~~~~~~~~~~~-----~~~~~~-~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++ +. +..+.+++++++.+... ....++ .+.|.++||.+.|..... ..+++||+++ .+++++++++++
T Consensus 322 ~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg---~~~~iRi~~~--~~~e~l~eal~r 396 (409)
T PLN02656 322 IPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG---LKNWLRITFA--ADPSSLEEALGR 396 (409)
T ss_pred CCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC---CCCeEEEEeC--CCHHHHHHHHHH
Confidence 73 32 23455677777776421 123344 466677799999843322 2479999996 489999999999
Q ss_pred HHHHHHHh
Q 046230 460 ISRVGDLV 467 (489)
Q Consensus 460 l~~~~~~~ 467 (489)
|.+++...
T Consensus 397 l~~~~~~~ 404 (409)
T PLN02656 397 IKSFYLRH 404 (409)
T ss_pred HHHHHHHh
Confidence 99987644
No 195
>PRK10534 L-threonine aldolase; Provisional
Probab=99.94 E-value=2.9e-25 Score=221.52 Aligned_cols=320 Identities=16% Similarity=0.156 Sum_probs=214.0
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL 181 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al 181 (489)
+|||+|+..-+ + +|.+.+++.+..... ..++..+...+|++.||+++|.+..+++++|++++...+.++
T Consensus 1 ~~~~~~~~~~~-p--~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~ 69 (333)
T PRK10534 1 MIDLRSDTVTR-P--SRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSH 69 (333)
T ss_pred CcccccccCCC-C--CHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHh
Confidence 47888875455 4 367777776543221 122345667899999999999998899999999987777778
Q ss_pred cCCCCEEEEcCCCchHHHH--HHHhcC-CeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 182 MRKGSLIISDSLNHNSIVN--GARGSG-ATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 182 ~~~g~~Vl~~~~~h~~~~~--~~~~~g-~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
..+|+.|+++.++|..... +....+ +.++.++.+ |+++|++++..... +. .++.+|++++.. +
T Consensus 70 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~------~~-~~~~lv~l~np~--~ 140 (333)
T PRK10534 70 CERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI------HF-ARTRLLSLENTH--N 140 (333)
T ss_pred cCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc------Cc-ccceEEEEecCC--C
Confidence 8999999988888865332 233333 566666443 67777776643100 00 023355555543 5
Q ss_pred CCCCCh---HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEeCHHHHHH
Q 046230 254 GELCKF---PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKELIQY 329 (489)
Q Consensus 254 G~~~~l---~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~~~~~ 329 (489)
|.+.+. ++|.++|++|+++|++||+|.++.....+....... ...|.++.||||++|.+ |||+++++++++.
T Consensus 141 G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~----~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~ 216 (333)
T PRK10534 141 GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT----QYCDSFTICLSKGLGTPVGSLLVGNRDYIKR 216 (333)
T ss_pred CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH----hcCCEEEEEeEcCCCCcccceEEcCHHHHHH
Confidence 888775 556788999999999999987432212122211111 11244455999999864 5589999999998
Q ss_pred HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCC
Q 046230 330 LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA 409 (489)
Q Consensus 330 l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~ 409 (489)
++.....+....+.+.+.++++.++|+.. .+.+++..++.+++.+.|+++|+.+..+ .++++++.+.. .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~---------~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~nfv~~~~~~-~ 285 (333)
T PRK10534 217 ARRWRKMTGGGMRQAGILAAAGLYALKHN---------VARLQEDHDNAAWLAEQLREAGADVMRQ-DTNMLFVRVGE-E 285 (333)
T ss_pred HHHHHHHhCCchhhHHHHHHHHHHHHHhh---------HHHHHHHHHHHHHHHHHHHhCCCccCCC-CceEEEEECCc-h
Confidence 87655432212123345566666666531 3444555667789999999999987655 57777776653 2
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
...++.+.|+++||.+.+. ..+|++.+..+|++++++++++|++++.
T Consensus 286 ~~~~~~~~l~~~gi~v~~~---------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 QAAALGEYMRERNVLINAS---------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred hHHHHHHHHHHcCeeecCC---------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 4568889999999999732 2589988778999999999999987653
No 196
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=2.2e-24 Score=220.46 Aligned_cols=339 Identities=17% Similarity=0.149 Sum_probs=223.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh---CC-CCEEEeCccHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV---GK-PAAIVFGMGYVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~-~~~i~~~sG~~a~ 174 (489)
+..++||+.++. .++ .+|.+.+++.+.+.+..... ....++......+|++.+|+++ +. ++.|++++|++..
T Consensus 32 ~~~~i~l~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~--~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~a 107 (402)
T TIGR03542 32 SADIIRLGIGDT-TQP-LPASVIEAFHNAVDELASEE--TFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCD 107 (402)
T ss_pred CCCeEEcCCCCC-CCC-CCHHHHHHHHHHHhcccccc--cccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHH
Confidence 456888874431 122 14667888888776532110 0011122233478999999875 32 4778889998776
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCC-----------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGA-----------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~-----------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
..++..+..+|+.|+++.|+|..+...++..|+ .++.++.+..+.+...+... +..+++
T Consensus 108 l~~l~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~i 177 (402)
T TIGR03542 108 VFRLQSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE----------PKIDII 177 (402)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc----------CCceEE
Confidence 444556668899999999999999998999998 77777654211111111110 124555
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G-- 317 (489)
+++ +.++++|.+.+ +++|+++|++||++||+||+|. .|-..+........++. .+..|+++||||.||.+|
T Consensus 178 ~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~--~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlR 254 (402)
T TIGR03542 178 YLC-SPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVR 254 (402)
T ss_pred EEe-CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhh--hhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcc
Confidence 555 78999999977 8899999999999999999999 65443321111222222 233588899999999889
Q ss_pred -eEEEeCHHHH--------HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 318 -GYIAGSKELI--------QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 318 -G~i~~~~~~~--------~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
||++++++++ +.+...... .+ .+.+.+.+.++.+.++- . ......+.++.++++.+.+.+.|++.
T Consensus 255 iG~~i~~~~l~~~~~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~~~l~~---~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 255 LGWTVVPKELTYADGHSVIQDWERRQCT-KF-NGASYPVQRAAEAAYAG---E-GLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred eEEEEecHHHhhcchhhHHHHHHHHhhh-cc-cCCCHHHHHHHHHHHcC---c-chhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998876 222111111 11 12555665555554431 0 11134456677888889999999998
Q ss_pred CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
|+.+..+.+++++++.+.......++.+.|++ +||.+.+.... ...+.+++||++ ..+++++++++++|.++
T Consensus 329 ~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f-~~~~~~~iRis~--~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGF-GPSGEGFVRFSA--FGKRENIVEACERIKEA 401 (402)
T ss_pred CceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEe--cCCHHHHHHHHHHHHhh
Confidence 88776666777888888765566788888885 59999974322 223457999997 34899999999999765
No 197
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1e-23 Score=211.79 Aligned_cols=316 Identities=17% Similarity=0.202 Sum_probs=226.9
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHh
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SAILP 179 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~ 179 (489)
.++|+.+.. .++ .++.+.+++.+.+...... . + . .....++++.+|++++.+ +.+++++|+++. ..++.
T Consensus 24 ~~~l~~~~~-~~~-~p~~~~~a~~~~~~~~~~~--~-y---~-~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 24 KYKMDANET-PFE-LPEEVIKNIQEIVKSSQVN--I-Y---P-DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIML 94 (351)
T ss_pred eeEccCCCC-CCC-CCHHHHHHHHHHhhcCccc--C-C---C-CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHH
Confidence 466664432 222 2467888887776531111 1 1 1 122478999999999864 778888888775 77778
Q ss_pred hhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 180 VLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 180 al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
++.++||.|+++.|+|..+...++..|++++.++.+ |++++++.++.. ..++++ +.++++++|
T Consensus 95 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----------~~k~v~-l~~p~NPtG 162 (351)
T PRK14807 95 AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY-----------QPKLVF-LCNPNNPTG 162 (351)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc-----------CCCEEE-EeCCCCCCC
Confidence 889999999999999998888888899998887654 567787777531 234444 457899999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHH
Q 046230 255 ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLK 331 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~ 331 (489)
...+.+++.++|++++.++|+||+|. .+. +.......+ ..+..|+++||||.+|.+| ||+++++++++.+.
T Consensus 163 ~~~~~~~l~~l~~~~~~~~ivDe~y~--~~~--~~~~~~~~~--~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~ 236 (351)
T PRK14807 163 SVIEREDIIKIIEKSRGIVVVDEAYF--EFY--GNTIVDVIN--EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLN 236 (351)
T ss_pred CCCCHHHHHHHHHhCCCEEEEeCcch--hhc--ccchHHHhh--hCCCEEEEecchHhcccchhceeeeecCHHHHHHHH
Confidence 99999999999999999999999997 552 222111121 1233699999999999779 99999999999987
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCc
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAK 410 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~ 410 (489)
..... +. .+++.+.++.+.|+.- ..++.++.++++.+.+.+.|+++ |+.+.+ .+++++++.+. .
T Consensus 237 ~~~~~--~~--~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~---~ 301 (351)
T PRK14807 237 LVKSP--YN--INSLSQVIALKVLRTG-------VLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK---D 301 (351)
T ss_pred HccCC--CC--cCHHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC---C
Confidence 65542 22 5666666666666421 45667777888888999999876 777654 45666666654 3
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
..++.+.|+++||.+.+.... +...+++||+++ +.++.++++++|++++
T Consensus 302 ~~~~~~~l~~~gV~v~~~~~~--~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 ADYVYQGLLERGILVRDFSKV--EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHHHHHHCCEEEEECCCC--CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 578899999999999863321 123578999984 5788889999887653
No 198
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=5.1e-24 Score=214.82 Aligned_cols=323 Identities=20% Similarity=0.266 Sum_probs=239.8
Q ss_pred CCccchHHHHHHHHHhCCCCC--CcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHH-HHhHhhh---cCCCCE
Q 046230 116 SDEYCTPRVIESLKKYSPSTC--SSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTN-SAILPVL---MRKGSL 187 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~-~~~~~al---~~~g~~ 187 (489)
.|..+.+++.+....|..... ......-.++..++.++.+|++++.+ +.|+|+.|++.. ..++.++ ..+||.
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gde 113 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDE 113 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCE
Confidence 467888999888877643332 22222223567789999999999975 778888877665 6666666 588999
Q ss_pred EEEcCCCchHHHHHH----HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 188 IISDSLNHNSIVNGA----RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 188 Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
|++....|++..... +..|++++.++.+ +++++++.+.+ ++.+|.+..+.+.+|.+.|
T Consensus 114 Iv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~-------------~Tklvais~vSn~tG~~~p 180 (405)
T COG0520 114 IVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP-------------KTKLVALSHVSNVTGTVNP 180 (405)
T ss_pred EEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC-------------CceEEEEECccccccccch
Confidence 999999999865543 3458889888864 56777775543 5667888899999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCC
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~ 336 (489)
+++|+++||++|+++++|.+|++|.+ ..++...++|+++.|-+|++ |+.| |++.+++++.+.+.+...+
T Consensus 181 v~~I~~la~~~ga~v~VDaaq~~~h~---------~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~g 251 (405)
T COG0520 181 VKEIAELAHEHGALVLVDAAQAAGHL---------PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGG 251 (405)
T ss_pred HHHHHHHHHHcCCEEEEECccccCcc---------CCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccC
Confidence 99999999999999999999997743 44555567799999999955 6658 9999999999887432110
Q ss_pred ------------ccc--------ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 046230 337 ------------HLY--------ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD 395 (489)
Q Consensus 337 ------------~~~--------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~ 395 (489)
.++ +.+.+.....+..+++++++.. ..++..++.+++.+++.+.|+++ ++.++++
T Consensus 252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~i----g~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~ 327 (405)
T COG0520 252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI----GMEAIEAHERELTEYLLEGLSELPGVEIYGP 327 (405)
T ss_pred CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 011 0123333444455777777431 35677888899999999999998 6888876
Q ss_pred C---CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCC-----CCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 396 N---DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPL-----LLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 396 ~---~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~-----~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
. +++++.+.+.. ....++...|.++||.++....++.|. -...+|+++...+|++|||+++++|+++.+
T Consensus 328 ~~~~r~~~vsF~v~~-~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 328 PDADRGGIVSFNVKG-IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CcccCceEEEEEeCC-CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 5 56666666543 357889999999999888765555432 134499999999999999999999998764
No 199
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=7.7e-24 Score=216.70 Aligned_cols=337 Identities=13% Similarity=0.121 Sum_probs=227.0
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (489)
++.+|+|+-.++- +.-..++.+.+++.+++++-... .+....|. .+|++.+|+++.. ++.|++++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~--~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN--SYAPTGGI----LPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC--CCCCCCCC----HHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 7889999844432 11123567778888877641111 11112234 6788888888732 36677877
Q ss_pred cHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|+... ..++.+++++||.|++..|+|..+...++..|++++.++.. |+++|+++++. ..+
T Consensus 105 G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 172 (409)
T PLN00143 105 GCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE------------NTI 172 (409)
T ss_pred ChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc------------CCE
Confidence 77665 88888899999999999999999988899999998887642 67788776643 244
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++++ +.+|++|.+.+ +++|+++|++|+++||+||+|. .+-..++.......+++.+.-|+++||||.|+.+|
T Consensus 173 ~~~~~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 249 (409)
T PLN00143 173 AMVII-NPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG--HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW 249 (409)
T ss_pred EEEEE-CCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc--ccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc
Confidence 45554 45899999977 7889999999999999999999 66554432111111222223589999999999889
Q ss_pred --eEEEeC--HHH------HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 --GYIAGS--KEL------IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 --G~i~~~--~~~------~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
||++++ +.+ ++.+........+ .+.+.++++.+.|+-- .....++.+++++++.+.+.+.|++
T Consensus 250 RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 250 GLGWLVTCDPSGLLQICEIADSIKKALNPAPF---PPTFIQAAIPEILEKT----TEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred ceEEEEeeCchhhhhhHHHHHHHHHHHhccCC---CCchHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999983 333 3333332221111 3555666666666410 1124577788888888999999988
Q ss_pred CCCee--eCCCCCCeEEEEeCC----C-CcHHHHHHHH-hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 388 MGFEV--LGDNDSPVMPIMLYN----P-AKIPAFSREC-LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 388 ~g~~v--~~~~~~~~~~~~~~~----~-~~~~~~~~~l-~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++... ..+.+++++++.+.. . ....++...+ .++||.+.|..... ..+++||+++ .+++++++++++
T Consensus 323 ~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~iRi~~~--~~~~~l~~al~r 397 (409)
T PLN00143 323 IPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG---LKNWLRITFA--VEQSSLEDGLGR 397 (409)
T ss_pred CCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEEc--CCHHHHHHHHHH
Confidence 75332 234467777777652 1 2355666555 66799999743221 3579999995 579999999999
Q ss_pred HHHHHHHhC
Q 046230 460 ISRVGDLVG 468 (489)
Q Consensus 460 l~~~~~~~~ 468 (489)
|.+++++..
T Consensus 398 l~~~l~~~~ 406 (409)
T PLN00143 398 LKSFCGRHA 406 (409)
T ss_pred HHHHHHHhc
Confidence 999887543
No 200
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.9e-24 Score=214.06 Aligned_cols=316 Identities=17% Similarity=0.202 Sum_probs=220.3
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~ 175 (489)
+.+++||+.+ +.++. +|.+.+++.+.+... ... ...| ..+|++.+|++++. ++.|++++|++.. .
T Consensus 29 ~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~~~-~~Y----~~~~----~~~lr~~ia~~~~~~~~~I~it~G~~~al~ 96 (357)
T PRK14809 29 PDDLVKLSSNENPHGP---SPAAVEAIREAAERV-HSY----PKAS----HADLTAALADRWDVSPEQVWLANGGDGALD 96 (357)
T ss_pred ccceeEecCCCCCCCC---CHHHHHHHHHHHhhh-hcC----CCCC----HHHHHHHHHHHhCCCcceEEECCCHHHHHH
Confidence 5679999855 33222 367788887776541 111 1112 36899999999985 4678888887665 7
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC---CHH-HHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---TPS-HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~-~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
.++.++.++||.|+++.|+|..+.......|+.++.++.+ +.+ +++++.+.. +..++++++ +.+|
T Consensus 97 ~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~----------~~~k~i~l~-~p~N 165 (357)
T PRK14809 97 YLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY----------DGERIVYLT-SPHN 165 (357)
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh----------cCCcEEEEe-CCCC
Confidence 7888889999999999999988877778888888877653 111 122222221 023455554 7889
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 252 MEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
++|...+.+++.++++.. +++||+||+|. .|...+.... . ++..+..++++||||.||.+| ||+++++++
T Consensus 166 PTG~~~s~~~~~~l~~~~~~~~~iI~De~y~--~~~~~~~~~~-~--~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~ 240 (357)
T PRK14809 166 PTGSEIPLDEVEALAERTDEETLVVVDEAYG--EFAERPSAVA-L--VEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEW 240 (357)
T ss_pred CCCcCCCHHHHHHHHHhCccCcEEEEechhh--hccCCchhHH-H--HhhCCCEEEEecchhHhcCcchhheeeecCHHH
Confidence 999999977777776654 78999999999 6654332211 1 122233588899999999879 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.+...... ++ .+++.++++.++|+. ..+.++.++.++++.+++.+.|....+ +.++.++++.+.
T Consensus 241 ~~~~~~~~~~--~~--~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~~ 306 (357)
T PRK14809 241 ADAYARVNTP--FA--ASELACRAGLAALDD------DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEVG 306 (357)
T ss_pred HHHHHHhCCC--CC--CCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEECC
Confidence 9988765432 33 677777777777641 224566777788888888888865432 345667776653
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+..++.+.|.++||.+.+...... .+++||++. +++++++++++|.++++
T Consensus 307 ---~~~~~~~~l~~~gv~v~~g~~f~~---~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 ---DASAVAEAAQERGVIVRDCTSFGL---PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ---CHHHHHHHHHHCCEEEEECccCCC---CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 457889999999999998443322 368999974 57999999999988764
No 201
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=9.6e-24 Score=215.70 Aligned_cols=295 Identities=19% Similarity=0.231 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHhC------CCCEEEeCccHH-HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----
Q 046230 148 HNELEECVARFVG------KPAAIVFGMGYV-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----- 215 (489)
Q Consensus 148 ~~~l~~~la~~~g------~~~~i~~~sG~~-a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----- 215 (489)
..++++.++++++ .++.+++++|++ ++..++.++..+|+.|++..+.|..+...++..|++++.++.+
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~ 147 (397)
T PRK07568 68 IPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGF 147 (397)
T ss_pred CHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCC
Confidence 3788888888873 235666666654 4577777888999999999999988877778889998887752
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 216 ---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 216 ---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
++++|++.+.. ..+ +|++..+.+++|.+.+ +++|+++|+++|+++|+||+|. .+...+.
T Consensus 148 ~~~~~~~l~~~~~~------------~~~-~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~--~~~~~~~ 212 (397)
T PRK07568 148 HLPSKEEIEKLITP------------KTK-AILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYR--EFVYDGL 212 (397)
T ss_pred CCCCHHHHHHhcCc------------cce-EEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccch--hcccCCC
Confidence 24566665532 234 4555566889998875 7899999999999999999999 6655553
Q ss_pred ccccccCCCC-CCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCC
Q 046230 290 GVCELLEVDT-ADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS 364 (489)
Q Consensus 290 ~~~~~~~v~p-~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~ 364 (489)
.......+.. .+..|+++||||.||.+| ||++++ +++++.+...... .+ +.+++.+.++.++|+. ..
T Consensus 213 ~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~--~~s~~~q~~~~~~l~~-----~~ 284 (397)
T PRK07568 213 KYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA-RL--SPPTLEQIGAAALLDT-----PE 284 (397)
T ss_pred CccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc-cC--CCCcHHHHHHHHHhhC-----CH
Confidence 2222222221 223588999999999778 999874 7888876544322 12 2566666666666542 12
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh------CCceEEeec-CCCcC-C
Q 046230 365 SRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR------QNVAVVTVA-FPATP-L 435 (489)
Q Consensus 365 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~-~p~~~-~ 435 (489)
.+.++.++.++++.+.+.+.|+++ ++.+..+.+++++++.+... ...++.+.|++ +||.+.|.. |...+ .
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~ 363 (397)
T PRK07568 285 SYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGL 363 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCCCCC
Confidence 245677888899999999999887 66665556666666666432 46678888875 599999733 21222 2
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 436 LLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.+++||+++ .+++++++++++|.+++++..
T Consensus 364 ~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 364 GKNEIRIAYV--LNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CCCeEEEEEe--CCHHHHHHHHHHHHHHHHHhh
Confidence 3579999985 578999999999999887643
No 202
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.7e-24 Score=213.59 Aligned_cols=319 Identities=15% Similarity=0.186 Sum_probs=229.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~-~ 175 (489)
+..++||+.+.. .++. ++.+.+++.+.+....... + ...| ..+|++.+|++++.+ +.+++++|+... .
T Consensus 25 ~~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~--Y-~~~~----~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~ 95 (356)
T PRK04870 25 ATGMVKLDAMEN-PYRL-PAELRAELGERLAEVALNR--Y-PDPR----AAALKAALRAAMGVPAGADVLLGNGSDELIQ 95 (356)
T ss_pred CCCceeCcCCCC-CCCC-CHHHHHHHHHHhhcccccc--C-CCCC----HHHHHHHHHHHhCcCCCCcEEEcCCHHHHHH
Confidence 456888864421 2332 3778888888776422111 1 1112 378999999999864 478889998776 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++.++||.|+++.|+|..+...++..|++++.++.+ |++++++.+... ..+++++ .+.+
T Consensus 96 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~-----------~~~~v~l-~~p~ 163 (356)
T PRK04870 96 LLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEH-----------RPALVFL-AYPN 163 (356)
T ss_pred HHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----------CCCEEEE-cCCC
Confidence 7777888999999999999999998999999999988764 677888777541 2444444 4668
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
+++|.+.+.+++.++++..++++|+||+|. .|.... .... +...+..|+++|||| ++.+| ||++++++++
T Consensus 164 NPtG~~~~~~~~~~i~~~~~~~ii~De~y~--~~~~~~-~~~~---~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i 236 (356)
T PRK04870 164 NPTGNLFDDADVERIIEAAPGLVVVDEAYQ--PFAGDS-WLPR---LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWI 236 (356)
T ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEECCch--hhcCcc-hHHH---HhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHH
Confidence 999999998888888877789999999998 554321 1111 111223588999999 88888 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~ 406 (489)
+.+...... ++ .+.+.++++..+++.. +..++.+++++++.+++.+.|+++ |+.+. +.++.++++.+.
T Consensus 237 ~~~~~~~~~--~~--~~~~~q~~a~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~ 305 (356)
T PRK04870 237 AELDKVRPP--YN--VNVLTQATALFALEHV------DVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP 305 (356)
T ss_pred HHHHHccCC--Cc--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC
Confidence 988765532 22 5666666666665421 145667788899999999999988 77664 445666666554
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
...++.+.|.++||.+.+.... .+...+++|++++ +.+++++++++|+++
T Consensus 306 ---~~~~~~~~l~~~gI~v~~~~~f-~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFDGLKTRGVLVKNLSGM-HPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHHHHHHCCEEEEECCCC-CCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 4567889999999999973221 1234579999984 789999999999875
No 203
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=3.4e-24 Score=220.70 Aligned_cols=324 Identities=17% Similarity=0.195 Sum_probs=228.1
Q ss_pred CccchHHHHHHHHHhCCCCCC-ccc-CCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHH-HHHhHhh----hcCCCCE
Q 046230 117 DEYCTPRVIESLKKYSPSTCS-SRV-DGGTLMVHNELEECVARFVGKP--AAIVFGMGYVT-NSAILPV----LMRKGSL 187 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~-~~~-~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a-~~~~~~a----l~~~g~~ 187 (489)
++.+.+++.+.+.++...... ... ..-..+...++++.+|++++.+ +.|++++|++. +..++.+ ..++|+.
T Consensus 45 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~ 124 (424)
T PLN02855 45 PAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDE 124 (424)
T ss_pred CHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCE
Confidence 467888888887765332111 110 0001344578999999999973 57777666554 4555554 3578999
Q ss_pred EEEcCCCchHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC
Q 046230 188 IISDSLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK 258 (489)
Q Consensus 188 Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~ 258 (489)
|++..+.|++.... ++..|++++.++.+ |++++++.++. ++.+|++..+.+++|.+.|
T Consensus 125 vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-------------~t~lv~i~~~~n~tG~~~~ 191 (424)
T PLN02855 125 VILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-------------KTKLVATHHVSNVLGSILP 191 (424)
T ss_pred EEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-------------CceEEEEeCccccccccCC
Confidence 99999999875433 35568888887653 67778877753 3446777889999999999
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCCc
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPAH 337 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~~ 337 (489)
+++|.++|+++|+++++|++|++|.. .+++...++|++++|++|.+|+.| |+++.++++++.+.....+.
T Consensus 192 ~~~I~~l~~~~g~~vivD~a~~~g~~---------~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~ 262 (424)
T PLN02855 192 VEDIVHWAHAVGAKVLVDACQSVPHM---------PVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGG 262 (424)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCCc---------CCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCC
Confidence 99999999999999999999985532 122322345999999999888878 99999998887664321000
Q ss_pred ------------------cc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC-
Q 046230 338 ------------------LY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN- 396 (489)
Q Consensus 338 ------------------~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~- 396 (489)
.| ..+.+....+++.++++.+... ..++..++..+..+++++.|+++ |+.++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~ 338 (424)
T PLN02855 263 EMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEI----GMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKP 338 (424)
T ss_pred CceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCc
Confidence 01 1124555667777888877421 45677888899999999999888 88877542
Q ss_pred -----CCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 397 -----DSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATP-----LLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 397 -----~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.++++.+.+. .....++.+.|.++ ||.+....+.+.+ ...+.+|++++..+|++|+++++++|+++++
T Consensus 339 ~~~~~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~ 417 (424)
T PLN02855 339 SEGVGRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIA 417 (424)
T ss_pred ccccCcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 2456655553 23566899999888 9998853322110 1136799999999999999999999999987
Q ss_pred Hh
Q 046230 466 LV 467 (489)
Q Consensus 466 ~~ 467 (489)
.+
T Consensus 418 ~~ 419 (424)
T PLN02855 418 FF 419 (424)
T ss_pred HH
Confidence 64
No 204
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=1.1e-23 Score=212.66 Aligned_cols=315 Identities=14% Similarity=0.165 Sum_probs=222.9
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC---EEEe-CccHHHHHHhHhhhcCCCCE-EEEc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPA---AIVF-GMGYVTNSAILPVLMRKGSL-IISD 191 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~-~sG~~a~~~~~~al~~~g~~-Vl~~ 191 (489)
|-.+.+++.+++...-. . + .....+..+++++.++++++.+. .+++ ++|++++..++.++..+++. |+..
T Consensus 11 p~~~~~~v~~~~~~~~~-~---~-~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~ 85 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDWC-T---W-DSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVI 85 (363)
T ss_pred CCCCCHHHHHHhCCCCC-C---C-ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEe
Confidence 45667777777655221 1 1 11235667889999999999752 4555 77788888888777766654 5556
Q ss_pred CCCchHH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHH
Q 046230 192 SLNHNSI-VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAI 265 (489)
Q Consensus 192 ~~~h~~~-~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l 265 (489)
..+|+.. ...++..|.+++.++.+ |+++++++++.. .+..++.+..+.+++|.+.|+++|.++
T Consensus 86 ~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~~~~~~~~tG~~~~i~~I~~l 154 (363)
T TIGR02326 86 NGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD-----------PAITHIALVHCETTTGILNPIEAVAKL 154 (363)
T ss_pred CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC-----------CCccEEEEEeecCCccccCcHHHHHHH
Confidence 6677664 34467778888877654 788899888752 122345556667889999999999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCC-------
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPA------- 336 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~------- 336 (489)
|++||+++++|++|++|... .++...++|++++|++|++ |++| |+++.+++.++.+.....+
T Consensus 155 ~~~~g~~livD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 225 (363)
T TIGR02326 155 AHRHGKVTIVDAMSSFGGIP---------IDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYD 225 (363)
T ss_pred HHHcCCEEEEEccccccCcc---------cchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHH
Confidence 99999999999999865431 2232234599999999998 6668 9999999887765421111
Q ss_pred -----------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCCe-EE
Q 046230 337 -----------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSPV-MP 402 (489)
Q Consensus 337 -----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~~-~~ 402 (489)
..|+ .++....+..++++.+.. ....+++.++++++.+++++.|+++|+.+..+. .+++ .+
T Consensus 226 ~~~~~~~~~~~~~ft--~~~~~~~al~~al~~l~~---~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 300 (363)
T TIGR02326 226 QWRCMEDNHGKWRFT--SPTHVVHAFAQALLELEK---EGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITS 300 (363)
T ss_pred HHHHHhccCCCCCCC--CcHHHHHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEE
Confidence 1222 567777777888877632 112466889999999999999999998775432 3544 34
Q ss_pred EEeCCC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 403 IMLYNP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 403 ~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+.+... ....++.+.|.++||.+.+... ...+.+|+++...+|.+|+++++++|++++.
T Consensus 301 ~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~----~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 301 FYSPEDPDYRFADFYQRLKEQGFVIYPGKV----SQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EECCCCCCCCHHHHHHHHHHCCEEEECCcC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 444432 3567899999999999985321 2347899998667899999999999988753
No 205
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=6.8e-24 Score=217.12 Aligned_cols=333 Identities=15% Similarity=0.123 Sum_probs=223.6
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh------CC-CCEEEeCc
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV------GK-PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~-~~~i~~~s 169 (489)
|+.++||+.++.- ++. .++.+.+++.+.+... . .+ +......+|++.+|+++ +. ++.+++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~-~~~~i~~~~~~~~~~~-~---~Y----~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~ 102 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFE-APDEILRDVIRNLPTA-Q---GY----SDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGN 102 (404)
T ss_pred CCCeEEecCCCCCcCCCC-CCHHHHHHHHHHhhcC-C---CC----CCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence 6788998754432 333 2456777777655431 1 11 11222368899999987 32 46788888
Q ss_pred cHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 170 GYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 170 G~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
|++.. ..++.++.++||.|+++.+.|..+...++..|+.++.++.+ |++++++.+.. +.+
T Consensus 103 G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 170 (404)
T PRK09265 103 GVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP------------RTK 170 (404)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc------------cce
Confidence 87775 77888889999999999999999988888888888776532 56777766543 234
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+++++ ++.|++|.+.+ +++|+++|+++|++||+||+|. .+-..+..........++..-|+++||||.+|.+|
T Consensus 171 ~v~l~-~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 247 (404)
T PRK09265 171 AIVII-NPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD--KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGF 247 (404)
T ss_pred EEEEE-CCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhh--hccCCCCCcCCHHHcCCCceEEEEecchhhccCccc
Confidence 44444 56899999988 8999999999999999999998 55443322122222333323477899999998889
Q ss_pred --eEEEe--CHH----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHH---HHHHHHHHHHHHHHHH
Q 046230 318 --GYIAG--SKE----LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK---LARIRENSNFFRSELQ 386 (489)
Q Consensus 318 --G~i~~--~~~----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~L~ 386 (489)
||++. +++ +++.+..... ..+ +.|.+.+.++.++|... ...++. .+++.++.+.+.+.|+
T Consensus 248 RiG~~v~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~r~~~~~~L~ 318 (404)
T PRK09265 248 RVGWMVLSGPKKHAKGYIEGLDMLAS-MRL--CANVPAQHAIQTALGGY------QSINELILPGGRLYEQRDRAWELLN 318 (404)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHHhc-ccc--CCCcHHHHHHHHHhcCc------hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99985 443 3444432211 112 25666666666666311 011222 2466777888899998
Q ss_pred hC-CCeeeCCCCCCeEEEEeCCC-----CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 387 KM-GFEVLGDNDSPVMPIMLYNP-----AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 387 ~~-g~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
++ |+.+..+.+++++++.+... .....+.+.|.++||.+.+..... ....+++|+++ ..+++++++++++|
T Consensus 319 ~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~-~~~~~~~Ri~~--~~~~e~l~~~l~rl 395 (404)
T PRK09265 319 AIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFN-WPEPDHFRIVT--LPRVDDLEEAIGRI 395 (404)
T ss_pred cCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhC-CCCCCeEEEEe--CCCHHHHHHHHHHH
Confidence 87 77776677788877776532 223456677888899998732211 12357899999 47899999999999
Q ss_pred HHHHHHh
Q 046230 461 SRVGDLV 467 (489)
Q Consensus 461 ~~~~~~~ 467 (489)
.++++..
T Consensus 396 ~~~l~~~ 402 (404)
T PRK09265 396 GRFLSGY 402 (404)
T ss_pred HHHHHHh
Confidence 9988643
No 206
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.94 E-value=7e-24 Score=216.87 Aligned_cols=334 Identities=15% Similarity=0.117 Sum_probs=229.1
Q ss_pred cceeEeccccccc---CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeC
Q 046230 99 VNRCLNLGSYNYL---GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFG 168 (489)
Q Consensus 99 g~~~id~~s~~~l---g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~ 168 (489)
|.+++||+..++- .++ .++.+.+++.+.+..... . .++......++++.++++++. ++.++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~l~~~~~--~----~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t 102 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLR-TDPEAEEAVKDALRSGKF--N----GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLT 102 (403)
T ss_pred CCCeEEeCCCCCCccCCCC-CCHHHHHHHHHHHhcCCC--C----CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEe
Confidence 6789999844321 112 145677777766653111 1 112233347899999999874 3456665
Q ss_pred cc-HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 169 MG-YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 169 sG-~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
+| ++++..++.++..+|+.|+++.++|..+...+...|.+++.++.+ |++++++.+.. +.
T Consensus 103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~ 170 (403)
T TIGR01265 103 SGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE------------KT 170 (403)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc------------Cc
Confidence 55 555688888888999999999999998888888889988877542 56777766543 23
Q ss_pred cEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc
Q 046230 241 KIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G 317 (489)
+ ++++...++++|.+.+ +++|+++|+++|+++|+||+|. .+-..+........+++...-|+++||||.|+.+|
T Consensus 171 ~-~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 247 (403)
T TIGR01265 171 V-AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYG--HMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPG 247 (403)
T ss_pred c-EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc--ccccCCCCccchhhhccCCcEEEEeecccccCCCc
Confidence 3 4455566889998865 8999999999999999999999 66554432112223333222588899999998889
Q ss_pred ---eEEEeC--HH-----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 ---GYIAGS--KE-----LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 ---G~i~~~--~~-----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
||++++ ++ +++.+..... ... +.+.+.+.++.+.|+.- .....++.+++++++.+++.+.|+.
T Consensus 248 lRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (403)
T TIGR01265 248 WRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RIL--GPATIVQGALPDILENT----PQEFFDGKISVLKSNAELCYEELKD 320 (403)
T ss_pred ceEEEEEEeCchhhhHHHHHHHHHHHhh-hhc--CCChHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999873 22 4444443322 112 25666777776666421 1125677888889999999999998
Q ss_pred C-CCeeeCCCCCCeEEEEeCCC-----CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 388 M-GFEVLGDNDSPVMPIMLYNP-----AKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 388 ~-g~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
+ |+.+..+.+++++++.+... ....++.+.|+ ++||.+.+..... ..+++||+++ ..++.+++++++|
T Consensus 321 ~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---~~~~iRis~~--~~~~~l~~~l~~l 395 (403)
T TIGR01265 321 IPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG---LPNWVRITIT--VPESMLEEACSRI 395 (403)
T ss_pred CCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEec--CCHHHHHHHHHHH
Confidence 7 77665666788888776532 24667888865 5699999744322 2578999995 5688999999999
Q ss_pred HHHHHH
Q 046230 461 SRVGDL 466 (489)
Q Consensus 461 ~~~~~~ 466 (489)
.+++++
T Consensus 396 ~~~~~~ 401 (403)
T TIGR01265 396 KEFCER 401 (403)
T ss_pred HHHHHh
Confidence 988764
No 207
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=5.4e-24 Score=221.47 Aligned_cols=303 Identities=15% Similarity=0.152 Sum_probs=211.0
Q ss_pred hHHHHHHHHHHHhC---------CCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHH-hcCCeEEEecCC
Q 046230 147 VHNELEECVARFVG---------KPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN 215 (489)
Q Consensus 147 ~~~~l~~~la~~~g---------~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-~~g~~~~~~~~~ 215 (489)
...+|++.||++++ .++.|++++|+... ..++.+++++||.|+++.|+|+.+...+. ..|++++.++.+
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~ 174 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCS 174 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCC
Confidence 33678888888875 13678888887665 88889999999999999999999988777 479999988762
Q ss_pred -------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccc
Q 046230 216 -------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 216 -------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
|++++++.++.....+ .+.++++ +.+.++++|.+.+ +++|+++|++|+++||+||+|. .+-
T Consensus 175 ~~~~~~~~~~~le~a~~~a~~~~------~~~k~l~-l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~--~~~ 245 (496)
T PLN02376 175 SSDNFKLTVDAADWAYKKAQESN------KKVKGLI-LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYA--ATV 245 (496)
T ss_pred CCccCcCCHHHHHHHHHHHHhcC------CCeeEEE-EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc--ccc
Confidence 5778877765432211 1234444 4577899999977 7789999999999999999999 544
Q ss_pred CCCCccccccCC----CCC----CccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 286 KTGRGVCELLEV----DTA----DVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 286 ~~G~~~~~~~~v----~p~----~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
..+........+ +.. +.-+++.||||.||.+| ||++++ +.+.+.++.... ++ ..+.+.+.++.+
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~---~~-~vs~~~Q~a~~~ 321 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSS---FG-LVSSQTQLMLAS 321 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhh---cC-CCCHHHHHHHHH
Confidence 333221111111 111 22256789999999889 999984 666666554332 11 255555555555
Q ss_pred HHHHHHccCC-CchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCC-------cHHHHHHHHhhC-Cce
Q 046230 354 AIKVILGEDG-SSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA-------KIPAFSRECLRQ-NVA 424 (489)
Q Consensus 354 ~L~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~-Gi~ 424 (489)
.|+-- .. .....+.+++++++.+.+.+.|++.|+.+..+.++.++|+.+.... ...++++.++++ ||.
T Consensus 322 ~L~d~---~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~ 398 (496)
T PLN02376 322 MLSDD---QFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLN 398 (496)
T ss_pred HhCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEE
Confidence 54310 00 0123445777888889999999998888777777788888775321 225688888875 999
Q ss_pred EEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 425 VVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 425 v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|..... ....+++|++++ ..++++++.++++|.+++.+.
T Consensus 399 v~pGs~F~-~~~~g~~Ri~fa-~~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 399 VSPGSSFR-CTEPGWFRICFA-NMDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred EeCccccC-CCCCCEEEEEee-CCCHHHHHHHHHHHHHHHHHh
Confidence 99843222 224579999995 467899999999999988643
No 208
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=5.9e-24 Score=220.40 Aligned_cols=302 Identities=14% Similarity=0.148 Sum_probs=214.7
Q ss_pred HHHHHHHHHHhC---------CCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHH-hcCCeEEEecCC--
Q 046230 149 NELEECVARFVG---------KPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN-- 215 (489)
Q Consensus 149 ~~l~~~la~~~g---------~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-~~g~~~~~~~~~-- 215 (489)
.+|++.+|++++ .++.|++++|+.+. ..++.+++++||.|+++.|+|..+...+. ..|++++.++.+
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~ 168 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSS 168 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCc
Confidence 678888888874 24668888887765 88888999999999999999999888777 479999888752
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 216 -----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
|++++++.+.+..+.+ ...++++++ +.+||+|.+.+ +++|+++|++||++||+||+|+ .+-..
T Consensus 169 ~~~~~~~~~le~~~~~~~~~~------~~~k~v~l~-nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~--~~~f~ 239 (468)
T PLN02450 169 NGFQITESALEEAYQQAQKLN------LKVKGVLIT-NPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYS--GTVFD 239 (468)
T ss_pred cCCcCCHHHHHHHHHHHHhcC------CCeeEEEEe-cCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccc--ccccC
Confidence 5678888877643322 123445555 67899998866 7789999999999999999998 54333
Q ss_pred CCc---ccccc------CCCCCCccEEEcccccccCCcc---eEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 288 GRG---VCELL------EVDTADVDIMMGTFTKSFGSCG---GYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 288 G~~---~~~~~------~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
+.. ..... +.++.+.-++++||||.||.+| ||+++++ .+++.+..... ++ ..+.+.+.++.+.
T Consensus 240 ~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~---~~-~~s~~~Q~a~~~~ 315 (468)
T PLN02450 240 SPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS---FG-LVSSQTQYLLSAL 315 (468)
T ss_pred CCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh---cC-CCCHHHHHHHHHH
Confidence 321 11111 1122334588999999999879 9999975 45665554422 21 2566666666665
Q ss_pred HHHHHccCCC-chHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCC------cHHHHHHHHhh-CCceEE
Q 046230 355 IKVILGEDGS-SRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRECLR-QNVAVV 426 (489)
Q Consensus 355 L~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~Gi~v~ 426 (489)
|+-- ... ...++.+++++++.+.+.+.|+++|+.+..+.++.++++.+.... ...++.+.|++ +||.+.
T Consensus 316 L~~~---~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~ 392 (468)
T PLN02450 316 LSDK---KFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNIS 392 (468)
T ss_pred hCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEe
Confidence 5310 000 134667888999999999999999988777777777777764221 12356777765 699999
Q ss_pred eecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 427 TVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 427 ~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
|...... .+.+++||+++ .++++++++++++|.++++...
T Consensus 393 PG~~f~~-~~~g~~Rl~f~-~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 393 PGSSCHC-TEPGWFRVCFA-NMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CccccCC-CCCCEEEEEec-CCCHHHHHHHHHHHHHHHHhcc
Confidence 8433222 24579999995 3689999999999999987765
No 209
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=8.2e-24 Score=214.38 Aligned_cols=327 Identities=16% Similarity=0.136 Sum_probs=226.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 176 (489)
++..++++.+ .+|.+.+++.+.+++.. +. +....+....++++++.+|+++|.+ ..+++++|++++..
T Consensus 22 ~~~~~~~~~~-------~~~~~~~a~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~ 91 (373)
T TIGR03812 22 GRILGSMCTN-------PHPIAVKAYDMFIETNL-GD--PGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQ 91 (373)
T ss_pred CcEEEEEeCC-------chHHHHHHHHHHhhcCC-CC--cccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHH
Confidence 4556666532 24566777776655431 11 2223456677899999999999975 34667778888766
Q ss_pred hHhhhc------CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 177 ILPVLM------RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 177 ~~~al~------~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
++.++. .+|+.|+++.++|.++...++..|++++.++++ |++++++.+.+ ..+.+++
T Consensus 92 ~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~------------~~~~vv~ 159 (373)
T TIGR03812 92 AVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDD------------NTIGIVG 159 (373)
T ss_pred HHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhh------------CcEEEEE
Confidence 655543 366899999999999988899999999888764 78888888765 2334555
Q ss_pred EcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcc-ccccCCCCCCccEEEcccccccC-C--cceEEE
Q 046230 246 VEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV-CELLEVDTADVDIMMGTFTKSFG-S--CGGYIA 321 (489)
Q Consensus 246 ve~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~-~~~~~v~p~~~Di~~~t~sK~~g-~--~GG~i~ 321 (489)
+.+ .+++|.+.|+++|.++|+++|+++|+|++|+.+.++..+.+. ....++....+|.+..+.+|+.. + .|++++
T Consensus 160 ~~~-~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~ 238 (373)
T TIGR03812 160 IAG-TTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILF 238 (373)
T ss_pred ECC-CCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEE
Confidence 554 578999999999999999999999999999844322110000 00111111245777678889542 2 235666
Q ss_pred eCHHHHHHHHhhCCCcccc-------cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 046230 322 GSKELIQYLKYTCPAHLYA-------TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG 394 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~-------~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~ 394 (489)
.++++++.+.... ++.+. .+.++..++++.++|+.+. ....++..+++.++++++++.|+++|+....
T Consensus 239 ~~~~~~~~l~~~~-~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 313 (373)
T TIGR03812 239 RSKSYLKYLSVDA-PYLTVKKQATITGTRSGASAAATYAVIKYLG----REGYRKIVAECMENTRYLVEELKKIGFEPVI 313 (373)
T ss_pred eCHHHHhhhcccC-cccCCCCCcceEeechhHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEc
Confidence 7888888775322 22221 1345567888888888762 2245678899999999999999999876443
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.+..+++.+.+. ...++.++|.++||.+.... ..+++|++++..+|++|+++++++|++
T Consensus 314 ~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 314 EPVLNIVAFEVD---DPEEVRKKLRDRGWYVSVTR------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CCCceEEEEEeC---CHHHHHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 334555555443 34589999999999987432 246899999989999999999999975
No 210
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=4e-24 Score=221.19 Aligned_cols=338 Identities=17% Similarity=0.159 Sum_probs=233.0
Q ss_pred ceeEecc-cccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHH----HHHHHHHhCCC-CEEEe----C
Q 046230 100 NRCLNLG-SYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNEL----EECVARFVGKP-AAIVF----G 168 (489)
Q Consensus 100 ~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~-~~i~~----~ 168 (489)
+++||+. |.|++ +|.+.+++...+.+ |+.+..+++...|... ..++ +++++++++.+ +.+.+ +
T Consensus 34 ~~~l~l~~sen~~-----s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~-~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~ 107 (452)
T PTZ00094 34 IEGLELIASENFT-----SRAVLECLGSCFTNKYAEGLPGNRYYGGNEV-VDKIENLCQKRALEAFGLDPEEWGVNVQPY 107 (452)
T ss_pred HcCeeEecccccC-----CHHHHHHhcchhhccccCCCCCccccccchH-HHHHHHHHHHHHHHHhCCCcccceeecCCC
Confidence 5688873 33332 57888888888854 6556666666655432 2444 45899999865 33323 5
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh--------c--CCeEEEecCC-----CHHHHHHHHHHHHhcCCC
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG--------S--GATIRVFQHN-----TPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~--------~--g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~ 233 (489)
||+++|..++.++.++||.|+++...|++....... . +..+..++++ |+++|+++++..
T Consensus 108 sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~------ 181 (452)
T PTZ00094 108 SGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAF------ 181 (452)
T ss_pred chHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHh------
Confidence 799999999999999999999999999886543311 1 1223445555 899999998752
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
..+.+++.+ +..|...|+++|.++|+++|+++++|++|++|.++..+... ...++|++++|.+|+|
T Consensus 182 -----~~~lvi~~~---s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~------~~~~~D~l~~S~hK~l 247 (452)
T PTZ00094 182 -----RPKLIIAGA---SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS------PFPYADVVTTTTHKSL 247 (452)
T ss_pred -----CCCEEEEeC---CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC------CCCCCcEEEcCCccCC
Confidence 233333333 44678899999999999999999999999988775433221 1124699999999988
Q ss_pred -CCcceEEEeCHHHHHHHHhhCCCcc---cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 046230 314 -GSCGGYIAGSKELIQYLKYTCPAHL---YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 314 -g~~GG~i~~~~~~~~~l~~~~~~~~---~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
|+.||+++.++++.+.+........ +..+.++...++..++|+.+.. ...++..+++.++.++|++.|++.|
T Consensus 248 ~GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~----~~~~~~~~~i~~l~~~l~~~L~~~g 323 (452)
T PTZ00094 248 RGPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQS----PEWKEYAKQVLKNAKALAAALEKRG 323 (452)
T ss_pred CCCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhC----hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6667888877665544332211111 2235777888888899998732 1446788999999999999999889
Q ss_pred CeeeCCC-CCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCCc--CCCCCeEEEeecCCCC----HHHHHHHHHHHH
Q 046230 390 FEVLGDN-DSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPAT--PLLLARARICISASHT----KEDLIKALEVIS 461 (489)
Q Consensus 390 ~~v~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~iRi~~~~~~t----~edid~~l~~l~ 461 (489)
+.+.... .+++..+.+... ....++...|.++||.+...+-|.. +...+++|++++..+| ++|++++++.|.
T Consensus 324 ~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 324 YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 8886532 244555544433 3456777778777999964333322 1234789999965554 999999999999
Q ss_pred HHHHHh
Q 046230 462 RVGDLV 467 (489)
Q Consensus 462 ~~~~~~ 467 (489)
++++..
T Consensus 404 ~~~~~~ 409 (452)
T PTZ00094 404 RAVKLA 409 (452)
T ss_pred HHHHHH
Confidence 988753
No 211
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.5e-23 Score=209.15 Aligned_cols=303 Identities=16% Similarity=0.217 Sum_probs=215.8
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSA 176 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 176 (489)
.++|||++| |++|.+. +.+. ...+..|+. .. .+|++.+|+++|.+ +.|++++|++....
T Consensus 24 ~~~i~ls~Nenp~~~~~--~~~~---~~~~~~Yp~------------~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~ 85 (339)
T PRK06959 24 DAWLDLSTGINPHGYPV--PPVP---ADAWRRLPE------------DD-DGLAACAARYYGAPDAAHVLPVAGSQAAIR 85 (339)
T ss_pred hhhceeccCCCCCCCCC--CCCC---HHHHHhCCC------------ch-HHHHHHHHHHhCCCCcccEEECcCHHHHHH
Confidence 468999877 7777662 2222 134555542 11 68999999999974 68999999888744
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
++..+.++|+ |++..|+|..+...++..|++++.++.++ +. +.+ ..+.++++ +.+|++|.+
T Consensus 86 ~l~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-~~----~~~------------~~~~v~l~-nPnNPTG~~ 146 (339)
T PRK06959 86 ALPALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-DT----LPA------------ALTHLIVV-NPNNPTAER 146 (339)
T ss_pred HHHHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-hh----ccc------------cCCEEEEe-CCCCCCCCC
Confidence 4455667777 77799999999999999999999887654 21 111 12344444 447999999
Q ss_pred CChHHHH---HHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHH
Q 046230 257 CKFPEII---AICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYL 330 (489)
Q Consensus 257 ~~l~~i~---~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l 330 (489)
.+.+++. +.|++++.++|+||+|. .+... ....... +.++ -|+++||||.||.+| ||+++++++++.+
T Consensus 147 ~s~~~l~~l~~~~~~~~~~vI~DEay~--~~~~~-~s~~~~~--~~~~-vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l 220 (339)
T PRK06959 147 LPAARLLRWHAQLAARGGTLIVDEAFA--DTLPA-ASLAAHT--DRPG-LVVLRSVGKFFGLAGVRAGFVLAAPALLAAL 220 (339)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCc--cCCCc-ccchhcc--CCCC-EEEEecChhhcCCcchheEEEecCHHHHHHH
Confidence 7755554 45678899999999998 55422 1111111 2222 488999999999879 9999999999999
Q ss_pred HhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCc
Q 046230 331 KYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 410 (489)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~ 410 (489)
...... ++ .+.+.++++.++|+. ....++.++.++++.+++.+.|+++|+.+.. .+.++++.+ + .
T Consensus 221 ~~~~~~--~~--vs~~~q~a~~~~L~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~f~~~~~--~-~ 285 (339)
T PRK06959 221 RDALGA--WT--VSGPARHAVRAAFAD------AAWQAAMRERLAADGARLAALLRAHGFAVHA--TPLFSWTDD--P-R 285 (339)
T ss_pred HHhcCC--CC--CcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHCCCCccC--cceEEEEeC--C-C
Confidence 876643 23 567777777777752 1245677889999999999999999887652 344444433 2 4
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
..++.+.|.++||.+...+. .+++||++ ..+++++++++++|+++++.+.
T Consensus 286 ~~~l~~~l~~~GI~vr~~~~------~~~lRisi--~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 286 AAALHAALARRGIWTRYFAP------PPSVRFGL--PADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHhCCeEEEECCC------CCeEEEEC--CCCHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999985321 25899997 3578899999999998887653
No 212
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=3.4e-23 Score=209.45 Aligned_cols=320 Identities=14% Similarity=0.170 Sum_probs=225.2
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC---CEE-EeCccHHHHHHhHhhhcCCCCEEEEcC
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP---AAI-VFGMGYVTNSAILPVLMRKGSLIISDS 192 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i-~~~sG~~a~~~~~~al~~~g~~Vl~~~ 192 (489)
|-.+.+++.+++...- ..... ...+...++++.+++++|.+ +.+ ++++|++++..++.++..+++.|++..
T Consensus 13 P~~~~~~~~~a~~~~~-~~~~~----~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~ 87 (368)
T PRK13479 13 PLTTSRTVREAMLRDW-GSWDD----DFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCCCHHHHHHhCCCC-CCCCh----HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 4456677777765532 21111 12357789999999999974 334 457888999888888888877766654
Q ss_pred CCch-HH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHH
Q 046230 193 LNHN-SI-VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAI 265 (489)
Q Consensus 193 ~~h~-~~-~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l 265 (489)
+.+. .. ...++..|++++.++.+ |++++++.+.+. .+..+|.+..+.+++|...|+++|.++
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~~~~~~~~tG~~~~~~~i~~l 156 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD-----------PRITHVALVHCETTTGILNPLDEIAAV 156 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC-----------CCCcEEEEEcccCccccccCHHHHHHH
Confidence 4443 33 35567778888877653 688888877642 123355566777889999999999999
Q ss_pred HHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCCcc-----
Q 046230 266 CKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPAHL----- 338 (489)
Q Consensus 266 ~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~~~----- 338 (489)
|+++|+++|+|++|++|.. ..++...++|++++|++|++ |++| ||++.++++++.+.....++.
T Consensus 157 ~~~~~~~livDa~~~~g~~---------~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T PRK13479 157 AKRHGKRLIVDAMSSFGAI---------PIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYD 227 (368)
T ss_pred HHHcCCEEEEEcccccCCc---------cccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHH
Confidence 9999999999988875532 12232234589999999987 6678 999999998888765432210
Q ss_pred ----------cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCCe-EEEEe
Q 046230 339 ----------YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSPV-MPIML 405 (489)
Q Consensus 339 ----------~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~~-~~~~~ 405 (489)
...+.+....+++.++++.+.. .+..++.++++.++.+++++.|+++|+.+..+. .++. ..+.+
T Consensus 228 ~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 228 QWAYMEKTGQWRFTPPTHVVAAFYQALLELEE---EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HHhhhcccCCCCCCCcHHHHHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEEC
Confidence 0013566677777788877632 113467788999999999999999998765432 2333 44444
Q ss_pred CCC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 406 YNP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
... .+..++.++|.++||.+.+... ...+.+|++....+|++|+++++++|++++++++
T Consensus 305 ~~~~~~~~~~l~~~L~~~gi~v~~g~~----~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 305 PADPAYDFKEFYERLKEQGFVIYPGKL----TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCCCcCHHHHHHHHHHCCEEEecCCC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 433 3567899999999999974321 1236799987567899999999999999998765
No 213
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=1.7e-23 Score=208.27 Aligned_cols=272 Identities=17% Similarity=0.243 Sum_probs=200.3
Q ss_pred HHHHHHHHHHhCCC-CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHH
Q 046230 149 NELEECVARFVGKP-AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQ 227 (489)
Q Consensus 149 ~~l~~~la~~~g~~-~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~ 227 (489)
.++++.++++++.+ +.+++++|+++...++..+..+| .|++..++|..+...+...|.+++.++ |++++++.+++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~~- 125 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALEE- 125 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhccc-
Confidence 79999999999974 78889999988743344445667 588889999999999999999998887 88888877632
Q ss_pred HhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccE
Q 046230 228 IAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDI 304 (489)
Q Consensus 228 ~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di 304 (489)
.++ +++..+++++|.+.+ +++|+++|+++|+++|+||+|. .+.... ...+..+ ..+.+|
T Consensus 126 ------------~~~-v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~-~~~~~~~--~~~~~i 187 (330)
T TIGR01140 126 ------------LDV-LVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI--DFTPDA-SLAPQAA--RFPGLV 187 (330)
T ss_pred ------------CCE-EEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc--ccCCcc-chhhHhc--cCCCEE
Confidence 344 444555889999988 7788899999999999999998 554321 1222211 223479
Q ss_pred EEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHH
Q 046230 305 MMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 305 ~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (489)
+++||||+||.+| ||+++++++++.+...... ++ .+++.++++...++. ..+.+..+++++++.+++
T Consensus 188 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~--~s~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~l 257 (330)
T TIGR01140 188 VLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--WT--VNGPARAAGRAALAD------TAWQAATRARLAAERARL 257 (330)
T ss_pred EEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--CC--chHHHHHHHHHHHhc------hHHHHHHHHHHHHHHHHH
Confidence 9999999999778 9999999999998866543 22 566666666666552 124467788999999999
Q ss_pred HHHHHhCC-CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 382 RSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 382 ~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
.+.|++++ +.+.+ ..+.++++.+. ...+++++|+++||.+.+..++. ..+.+++||+++ ...++ ++++++|
T Consensus 258 ~~~L~~~~~~~~~~-~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~f~-~~~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 258 AALLARLGGLEVVG-GTALFLLVRTP---DAAALHEALARRGILIRDFDNFP-GLDPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred HHHHHhCCCceECC-CCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCCCC-CCCCCEEEEEec--CHHHH-HHHHHhh
Confidence 99999997 55543 35666565543 35689999999999999854431 124579999995 33355 7777765
No 214
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=1.9e-23 Score=210.87 Aligned_cols=314 Identities=13% Similarity=0.135 Sum_probs=221.0
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-HHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-SAI 177 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~~~ 177 (489)
+.+++|+.+. -.++ .+|.+.+++.+.+...+. ++... ..+|++.+++++|. ++.|++++|+... ..+
T Consensus 43 ~~~i~l~~~~-~~~~-~~~~~~~a~~~~~~~~~~--------Y~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~ 111 (370)
T PRK09105 43 EGAVFLNANE-CPLG-PSPAARDAAARSAALSGR--------YDLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYA 111 (370)
T ss_pred CCcEEecCCC-CCCC-CCHHHHHHHHHHHHHhcC--------CCCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHH
Confidence 3467776442 1222 247788888877654221 11122 57899999999885 4677787776654 788
Q ss_pred HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 178 LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 178 ~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
+.++.++||.|+++.|+|..+...++..|++++.++.+ |++++++. . ++.+ ++++.+++|+
T Consensus 112 ~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~------------~~~~-~v~l~nP~NP 177 (370)
T PRK09105 112 VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D------------PNAG-LIYICNPNNP 177 (370)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C------------CCCC-EEEEeCCCCC
Confidence 88889999999999999999999999999999888754 34444432 1 1234 4445567899
Q ss_pred CCCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 253 EGELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
+|.+.+.+++.++++. +++++|+||+|. .|+.. ....+..+. .+..++++||||++|.+| ||++++++++
T Consensus 178 TG~~~~~~~l~~l~~~~~~~~~lIvDEaY~--~f~~~-~s~~~~~~~--~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i 252 (370)
T PRK09105 178 TGTVTPRADIEWLLANKPAGSVLLVDEAYI--HFSDA-PSVVDLVAQ--RKDLIVLRTFSKLYGMAGMRLGLAAARPDLL 252 (370)
T ss_pred CCcCcCHHHHHHHHHhCCCCcEEEEECchH--HhccC-cchHHHHhh--CCCEEEEecccHhhcCCccceeeeecCHHHH
Confidence 9999998877777654 489999999997 55432 111222111 222478899999999889 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN 407 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~ 407 (489)
+.+.... .+ ..+.+.++++.++|+. ..+.++.+++++++.+.+.+.|++.|+.+..+.++ ++.+.+
T Consensus 253 ~~l~~~~---~~--~~~~~~~~aa~~~L~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~-f~~~~~-- 318 (370)
T PRK09105 253 AKLARFG---HN--PLPVPAAAAGLASLRD------PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQAN-CFMVDV-- 318 (370)
T ss_pred HHHHhcC---CC--CcCHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCc-EEEEeC--
Confidence 9887651 12 2566666667766642 12557777889999999999999999887655444 443433
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+....++++.|.++||.+. ..+ +...+++|+++. +++++++++++|++++
T Consensus 319 ~~~~~~l~~~L~~~gI~v~-~~~---~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 319 KRPAKAVADAMAKQGVFIG-RSW---PIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CCCHHHHHHHHHHCCcEEe-cCC---CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2456789999999999984 223 223579999984 6889999999998765
No 215
>PLN02231 alanine transaminase
Probab=99.94 E-value=2.5e-23 Score=217.74 Aligned_cols=336 Identities=12% Similarity=0.117 Sum_probs=223.4
Q ss_pred CccchHHHHHHHHHh-CCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCccHHHH-HHhHhhhc-CCCC
Q 046230 117 DEYCTPRVIESLKKY-SPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGMGYVTN-SAILPVLM-RKGS 186 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sG~~a~-~~~~~al~-~~g~ 186 (489)
+..+++++.+.+.+. +.....+ +.+....+|++.+|+++.. ++.|++++|+... ..++.++. .+||
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y----~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd 217 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAY----SHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKD 217 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCc----CCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCC
Confidence 445555655555542 2222222 3333347888888887732 3678888887665 77777887 4799
Q ss_pred EEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-
Q 046230 187 LIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK- 258 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~- 258 (489)
.|+++.|.|..+...+...|++++.++.+ |+++|++.+++...++ ...++++++ +.+|++|.+.+
T Consensus 218 ~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~------~~~k~ivl~-nP~NPTG~vls~ 290 (534)
T PLN02231 218 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKG------ITVRALVVI-NPGNPTGQVLAE 290 (534)
T ss_pred EEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcC------CCeEEEEEe-CCCCCCCcCCCH
Confidence 99999999999999999999998888643 6889999887642221 123444554 66899998865
Q ss_pred --hHHHHHHHHHcCcEEEEEcccccccccCC-CCcccccc------CCCCCC-ccEEEccccccc-CCcc---eEEEe--
Q 046230 259 --FPEIIAICKKYKAYIYLDEAHSIGAVGKT-GRGVCELL------EVDTAD-VDIMMGTFTKSF-GSCG---GYIAG-- 322 (489)
Q Consensus 259 --l~~i~~l~~~~~~~li~DEa~s~g~~g~~-G~~~~~~~------~v~p~~-~Di~~~t~sK~~-g~~G---G~i~~-- 322 (489)
+++|+++|++||++||+||+|. .+-.. +....... +....+ .-|.++||||.+ |.+| ||++.
T Consensus 291 e~l~~Iv~~a~~~~l~lI~DEvY~--~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~ 368 (534)
T PLN02231 291 ENQRDIVEFCKQEGLVLLADEVYQ--ENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 368 (534)
T ss_pred HHHHHHHHHHHHcCCEEEEEccch--hcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence 7899999999999999999999 55443 22111111 111111 247789999986 6678 99975
Q ss_pred -CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH-------HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 046230 323 -SKELIQYLKYTCPAHLYATSISPPAAEQIISAIK-------VILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL 393 (489)
Q Consensus 323 -~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~-------~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~ 393 (489)
++++++.+..... ... ..+...+.++...++ .+.. ...+.++.++.++++.+.+.+.|+++ |+.+.
T Consensus 369 ~~~~l~~~l~k~~~-~~~--~s~~~~Q~~~~~~l~~p~~~~~~y~~--~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~ 443 (534)
T PLN02231 369 FTSDVREQIYKVAS-VNL--CSNISGQILASLVMSPPKPGDESYES--YMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443 (534)
T ss_pred CCHHHHHHHHHHHh-hhc--CCChHHHHHHHHHhCCCCCCcchHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 6888888866543 111 233344444444332 0000 00022345788999999999999998 88887
Q ss_pred CCCCCCeEEEEeCCCCc------------HHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 394 GDNDSPVMPIMLYNPAK------------IPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~~------------~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
.+.++++++..+..+.. ...++.+|++ .||.++|........+..++|+++ ..+++++++++++|
T Consensus 444 ~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~eal~RL 521 (534)
T PLN02231 444 KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVSRL 521 (534)
T ss_pred CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHHHHHHH
Confidence 77778776644432211 2235666775 599999833222123456799998 57899999999999
Q ss_pred HHHHHHhCCccC
Q 046230 461 SRVGDLVGIKYF 472 (489)
Q Consensus 461 ~~~~~~~~~~~~ 472 (489)
.+++++...||.
T Consensus 522 ~~~~~~~~~~~~ 533 (534)
T PLN02231 522 TEFHKSFMDEFR 533 (534)
T ss_pred HHHHHHHHHHhc
Confidence 999998877764
No 216
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=2.8e-23 Score=208.91 Aligned_cols=317 Identities=17% Similarity=0.172 Sum_probs=219.9
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~ 175 (489)
+++++||+.+ +.++. ++.+.+++.+.+.... .. .. ....++++.+|++++. ++.+++++|+... .
T Consensus 19 ~~~~i~l~~~~~~~~~---p~~~~~a~~~~~~~~~-~y-------~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~ 86 (356)
T PRK08056 19 PDQLLDFSANINPLGM---PVSLKRAIIDNLDCAE-RY-------PD-VEYRHLHQALARHHQVPASWILAGNGETESIF 86 (356)
T ss_pred hhhEEEeccccCCCCC---CHHHHHHHHHHHHhcc-cC-------cC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHH
Confidence 5779999754 44443 3678888888776532 11 11 1248999999999985 4678888887765 5
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHH-HHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPS-HLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~-~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
.++.++ .++++ ++..|.|..+...++..|++++.++.+ +++ ++++.+. +..+ +|++.++
T Consensus 87 ~~~~~l-~~g~v-iv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~------------~~~k-~v~l~~p 151 (356)
T PRK08056 87 AVVSGL-KPRRA-MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALT------------PDLD-CLFLCTP 151 (356)
T ss_pred HHHHHh-CCCCE-EEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhcc------------CCCC-EEEEeCC
Confidence 556665 56764 556788988888889999999988753 121 2222221 1234 4556778
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEe-
Q 046230 250 YSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG- 322 (489)
Q Consensus 250 ~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~- 322 (489)
++++|.+.+ +++|+++|++++++||+||+|. .|-..+......+. ..+.+|+++||||+||.+| ||+++
T Consensus 152 ~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 152 NNPTGLLPERQLLQAIAERCKSLNIALILDEAFI--DFIPDETGFIPQLA--DNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh--ccCCcchHHHHHhc--cCCCEEEEEechhhccCcchhheeeecC
Confidence 999999888 8889999999999999999998 66544432111111 1224789999999999879 99997
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeE
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVM 401 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~ 401 (489)
++++++.+...... + +.+.+.+.++.+.|+ ......+.++.++++.+++.+.|+++ ++.+.++ +++++
T Consensus 228 ~~~~~~~l~~~~~~--~--~~~~~~~~~a~~~l~------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~ 296 (356)
T PRK08056 228 DDAAVARMRRQQMP--W--SINAFAALAGEVILQ------DRAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYL 296 (356)
T ss_pred CHHHHHHHHHhCCC--C--chhHHHHHHHHHHhC------CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEE
Confidence 56787877654322 2 255555555555553 11244566788899999999999887 7766544 56666
Q ss_pred EEEeCCCCcHHHHHHHHhhCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 402 PIMLYNPAKIPAFSRECLRQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++.+.. ...++++.|+++||.+.+.. |+ ....+++||+++ ++++.+.++++|++++
T Consensus 297 ~~~~~~--~~~~~~~~l~~~gI~v~~~~~f~--~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 297 FLRCER--PDIDLQRALLTQRILIRSCANYP--GLDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred EEEcCC--ChHHHHHHHHHCCeEEEECCCCC--CCCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 665542 35689999999999999743 32 233568999984 7899999999998764
No 217
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=3.9e-23 Score=207.59 Aligned_cols=317 Identities=18% Similarity=0.222 Sum_probs=220.4
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SA 176 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~ 176 (489)
..++||+.+ +..+. ++.+.+++.+.+..... . .. ....+|++++|++++.+ +.|++++|+... ..
T Consensus 19 ~~~~~l~~~~~~~~~---p~~~~~a~~~~~~~~~~-Y-------~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~ 86 (354)
T PRK06358 19 NMILDFSANINPLGV---PESLKQAITENLDKLVE-Y-------PD-PDYLELRKRIASFEQLDLENVILGNGATELIFN 86 (354)
T ss_pred cceEEecCCCCCCCC---CHHHHHHHHHHHHhhhc-C-------CC-ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHH
Confidence 457999754 33333 46788888877654211 1 11 11378999999999864 678888888776 56
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC-----H-HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-----P-SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d-----~-~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
++.++ .+ +.|+++.|+|+.+...++..|++++.++.++ + +++.+.+.. ..++++++ ..+
T Consensus 87 ~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~v~~~-~P~ 151 (354)
T PRK06358 87 IVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKE------------EIDLVFLC-NPN 151 (354)
T ss_pred HHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhcc------------CCCEEEEe-CCC
Confidence 66665 44 5788999999999998999999988887541 2 222222211 24555555 458
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEe-C
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG-S 323 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~-~ 323 (489)
+++|...+ +++|+++|++|++++|+||+|. .|-..+........++..+.-|+++||||.||.+| ||+++ +
T Consensus 152 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 152 NPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM--DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc--ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 99998876 8899999999999999999998 66554432111111222233588999999999779 99987 4
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEE
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMP 402 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~ 402 (489)
+.+++.+...... ++ .+.+...++.++|+- ....++.++.++++.+.+.+.|++. |+.+..+ .+++++
T Consensus 230 ~~~~~~~~~~~~~--~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~ 298 (354)
T PRK06358 230 KNLAEKLLQMREP--WS--INTFADLAGQTLLDD------KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIF 298 (354)
T ss_pred HHHHHHHHHhCCC--Cc--chHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEE
Confidence 7888888765542 22 566666666666631 1134667788888999999999987 7666555 455666
Q ss_pred EEeCCCCcHHHHHHHHhhCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 403 IMLYNPAKIPAFSRECLRQNVAVVTV-AFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+.+.. ..++.+.|+++||.+.+. .|+ +.+.+++|+++ -++++.++++++|++++
T Consensus 299 ~~~~~---~~~~~~~l~~~gI~v~~~~~f~--~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLEK---PIDLRKELLKKGILIRSCSNYR--GLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred EEcCc---hHHHHHHHHHCCeEEEECCCCC--CCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 65542 368999999999999984 332 23457899998 57899999999998764
No 218
>PLN02672 methionine S-methyltransferase
Probab=99.93 E-value=2.1e-23 Score=227.98 Aligned_cols=337 Identities=15% Similarity=0.195 Sum_probs=235.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCccHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMGYVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~ 174 (489)
|..+|+++.+. ..++ .++.+.+++.+.+.+... ..|..++...+++.+++..|.+ +.|++++|+.+.
T Consensus 696 g~~vI~LsinE-~d~p-pPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 696 ESSLIHMDVDE-SFLP-VPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCEEEEeCCC-CCCC-CCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 67899987543 1223 247888888887765432 1234556678888888877753 378889999887
Q ss_pred -HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 175 -SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 175 -~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
..++.+++++||.|+++.|+|+.+...++..|++++.++.+ |.+.|++.++.. .++.++++
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-----------~~~~I~L~ 835 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-----------KKPWVYIS 835 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-----------CCCEEEEE
Confidence 67889999999999999999999999999999999988764 456777776431 13455666
Q ss_pred cCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-----ccccc-CCC---CCCccEEEcccccccC
Q 046230 247 EGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-----VCELL-EVD---TADVDIMMGTFTKSFG 314 (489)
Q Consensus 247 e~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-----~~~~~-~v~---p~~~Di~~~t~sK~~g 314 (489)
.|.+||+|.+.+ +++|+++|++||++||+||+|+ .+-.++.. ..+.. ..+ +...-|+++||||.++
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYs--dL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFS--GLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCC--ccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 555699998865 7889999999999999999998 55444321 01100 011 1223588899999999
Q ss_pred Ccc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccC--CCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 315 SCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGED--GSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 315 ~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
.+| ||++++ +++++.+..... ... .++....++.+++..+..+. ......+.++.++++.+++.+.|++.
T Consensus 914 lpGLRIGylIap~~eLi~~l~~~~~---~s~-~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 914 SGGHEFGFLALNDSVLIDAFHSAPG---LSR-PHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred cHHHHheeEEeCCHHHHHHHHHhhh---hcC-CCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 989 999986 458888876432 111 22222222222222221000 01134566777899999999999999
Q ss_pred CCeeeCCCCCCeEEEEeCC-----------------CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCH
Q 046230 389 GFEVLGDNDSPVMPIMLYN-----------------PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTK 450 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~ 450 (489)
|+.+..+.+++++++.+.. .....++++.|+++ ||.+.|..+.. ..+++||++. .++
T Consensus 990 Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG---~~g~~RIsfa--~~~ 1064 (1082)
T PLN02672 990 GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG---IPGYCRFSFA--LED 1064 (1082)
T ss_pred CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC---CCCeEEEEec--CCH
Confidence 9988877778777775421 12467899999987 99999753321 2579999994 588
Q ss_pred HHHHHHHHHHHHHHHH
Q 046230 451 EDLIKALEVISRVGDL 466 (489)
Q Consensus 451 edid~~l~~l~~~~~~ 466 (489)
+++++++++|.++.+-
T Consensus 1065 e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1065 SEFDRALKAIARFKEL 1080 (1082)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987653
No 219
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=1.9e-23 Score=212.16 Aligned_cols=324 Identities=15% Similarity=0.179 Sum_probs=223.0
Q ss_pred CCCCccchHHHHHHHHHh-CCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhhhc---CCCCE
Q 046230 114 AASDEYCTPRVIESLKKY-SPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPVLM---RKGSL 187 (489)
Q Consensus 114 ~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~al~---~~g~~ 187 (489)
+..++.+.+++.+.+.+. +..........-..+..+++++.+++++|.+ +.+++ ++|++++..++.++. .+++.
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~ 88 (379)
T TIGR03402 9 TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRH 88 (379)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCe
Confidence 334577888888877653 2111100000012445678899999999964 45555 566777766666543 45689
Q ss_pred EEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh
Q 046230 188 IISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF 259 (489)
Q Consensus 188 Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l 259 (489)
|++....|+++.... ...|.+++.++.+ |++++++.+++ ++.++++..+++++|.+.|+
T Consensus 89 vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~-------------~~~lv~i~~~~n~tG~~~~~ 155 (379)
T TIGR03402 89 IITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD-------------DTALVSVMWANNETGTIFPI 155 (379)
T ss_pred EEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CcEEEEEEcccCCeeecccH
Confidence 999999998865433 3358888887653 67888877753 34577778889999999999
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCC---
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCP--- 335 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~--- 335 (489)
++|.++|+++|+++++|++|++|.. ..++...++|+++.|.+|.+|+.| |++..+++.. +.....
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~g~~---------~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~--~~p~~~g~~ 224 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAVGKI---------PIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR--FRPLLRGGH 224 (379)
T ss_pred HHHHHHHHHcCCEEEEECccccccc---------ccCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC--CCCcccCCc
Confidence 9999999999999999999986532 223333456999888889778777 8887776531 111110
Q ss_pred ---CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCC---CCeEEEEeCC
Q 046230 336 ---AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-M-GFEVLGDND---SPVMPIMLYN 407 (489)
Q Consensus 336 ---~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~---~~~~~~~~~~ 407 (489)
.. ...+.+.....+..++++.+.. +.++..++.+++.+++++.|++ + ++.+.++.. ..++.+.+..
T Consensus 225 ~~~~~-~~gt~~~~~~~~l~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR03402 225 QERGR-RAGTENVPGIVGLGKAAELATE-----HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY 298 (379)
T ss_pred cCCCc-CCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC
Confidence 01 1224666777778888888742 4567778889999999999985 5 666665432 2255555543
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcC----------------CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATP----------------LLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~----------------~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....++...|.++||.+......+.+ ...+.+|++++..+|++|||++++.|+++++.+.
T Consensus 299 -~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 299 -IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred -CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34678888888889999863322211 1136899999999999999999999999987754
No 220
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.3e-23 Score=210.41 Aligned_cols=329 Identities=15% Similarity=0.165 Sum_probs=222.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~sG~ 171 (489)
+...+||+.++. .++ .++.+.+++.+.++........ ++......++++.+|++++ .++.+++++|+
T Consensus 32 ~~~~~~l~~g~p-~~~-~~~~v~~a~~~~~~~~~~~~~~----y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~ 105 (394)
T PRK06836 32 ADNVFDFSLGNP-SVP-PPAAVKEALRELAEEEDPGLHG----YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGA 105 (394)
T ss_pred CCCeEEecCcCC-CCC-CCHHHHHHHHHHHhcCCcCccc----CCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCCh
Confidence 345788864431 122 1345666666555432111111 2223344788888888875 24567777666
Q ss_pred HH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 172 VT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 172 ~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
+. ...++.+++.+|+.|+++.++|..+...++..|++++.++.+ |+++++++++. +.+ +|
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~------------~~~-~v 172 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP------------KTK-AV 172 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc------------Cce-EE
Confidence 54 477788889999999999999999888888889998888653 57778777743 234 44
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHH------cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKK------YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS 315 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~------~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~ 315 (489)
++.+.++++|.+.+ +++|+++|++ ||+++|+||+|. .+-..+......... .+..++++||||.||.
T Consensus 173 ~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~ 248 (394)
T PRK06836 173 IINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYR--EIVYDGAEVPYIFKY--YDNSIVVYSFSKSLSL 248 (394)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc--ccccCCCCCCChHHc--cCcEEEEecchhhccC
Confidence 55567899999877 6788888999 899999999998 554444322212221 1236999999999997
Q ss_pred cc---eEEEeCHHHHHH------HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 316 CG---GYIAGSKELIQY------LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 316 ~G---G~i~~~~~~~~~------l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
+| ||+++++++.+. +......... ...+++.+.++...++. ...++.++++.+.+.+.|+
T Consensus 249 pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~----------~~~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 249 PGERIGYIAVNPEMEDADDLVAALVFANRILGF-VNAPALMQRVVAKCLDA----------TVDVSIYKRNRDLLYDGLT 317 (394)
T ss_pred cceeeEEEecCHHHhhhHHHHHHHHHHhhcccc-ccCCHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHH
Confidence 78 999998876432 1111111001 12455555555444321 1235667788899999999
Q ss_pred hCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 387 KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 387 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.|+.+..+.+++++++.+.. ....++++.|.++||.+.+..... ..+++||+++ .+++++++++++|.+++++
T Consensus 318 ~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 318 ELGFECVKPQGAFYLFPKSPE-EDDVAFCEKAKKHNLLLVPGSGFG---CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred hCCCEeecCCceEEEEEeCCC-CCHHHHHHHHHhCCEEEECchhcC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 999887767677777776654 356788889989999999732211 1368999995 6899999999999999875
Q ss_pred h
Q 046230 467 V 467 (489)
Q Consensus 467 ~ 467 (489)
.
T Consensus 392 ~ 392 (394)
T PRK06836 392 Y 392 (394)
T ss_pred h
Confidence 4
No 221
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=2.6e-23 Score=213.99 Aligned_cols=306 Identities=17% Similarity=0.193 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHhCC---------CCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHH-hcCCeEEEecCC-
Q 046230 148 HNELEECVARFVGK---------PAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN- 215 (489)
Q Consensus 148 ~~~l~~~la~~~g~---------~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-~~g~~~~~~~~~- 215 (489)
..+|++.+|++++. ++.|++++|++.. ..++.+++++||.|+++.|+|+.+...+. ..|+++++++.+
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~ 176 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDS 176 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCC
Confidence 36788888887641 3568888886665 77888899999999999999999887776 468888887653
Q ss_pred ------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 216 ------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 216 ------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
|.++++++++++..+| .+.++ +++.+.+|++|.+.+ +++|+++|++|+++||+||+|....++.
T Consensus 177 ~~~f~~~~~~le~a~~~a~~~~------~~vk~-lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 177 SNNFQVTPQALEAAYQEAEAAN------IRVRG-VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA 249 (447)
T ss_pred CCCCcCCHHHHHHHHHHHHHhC------CCeeE-EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence 6788999887754433 12344 445567899998876 8899999999999999999998433432
Q ss_pred CCC-ccccc---cCC-CCCCccEEEcccccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHH
Q 046230 287 TGR-GVCEL---LEV-DTADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKV 357 (489)
Q Consensus 287 ~G~-~~~~~---~~v-~p~~~Di~~~t~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (489)
..- .+.+. .+. +..+.-+++.||||.||.+| ||+++ ++++++.++.... ++ ..+.+.+.++.+.|+-
T Consensus 250 ~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~---~~-~~s~~~q~~~~~~L~d 325 (447)
T PLN02607 250 SEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---FT-LVSSQTQHLLASMLSD 325 (447)
T ss_pred CCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhh---cC-CCCHHHHHHHHHHhCC
Confidence 211 12221 111 10222477899999999889 99998 6778777765432 21 1344454444444431
Q ss_pred HHccCC-CchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCC------CcHHHHHHHHhh-CCceEEeec
Q 046230 358 ILGEDG-SSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP------AKIPAFSRECLR-QNVAVVTVA 429 (489)
Q Consensus 358 i~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~~l~~-~Gi~v~~~~ 429 (489)
... .......+++++++.+.+.+.|++.|+++..+.++.++|+.+... ....++.+++++ .||.+.|..
T Consensus 326 ---~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~ 402 (447)
T PLN02607 326 ---EEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGS 402 (447)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCcc
Confidence 000 013456678888899999999999998877777788888877531 123467777776 599999733
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
... ....+++|++++ ..+++++++++++|.++++....
T Consensus 403 ~f~-~~~~g~fRi~fa-~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 403 SCH-CSEPGWFRVCFA-NMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred ccC-CCCCCEEEEEec-cCCHHHHHHHHHHHHHHHHHHHh
Confidence 222 234689999995 36899999999999999876543
No 222
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=1.8e-23 Score=212.08 Aligned_cols=318 Identities=17% Similarity=0.229 Sum_probs=222.7
Q ss_pred CccchHHHHHHHHHhCCC--CCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeC-ccHHHHHHhHhhhcCCCCEEEEc
Q 046230 117 DEYCTPRVIESLKKYSPS--TCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFG-MGYVTNSAILPVLMRKGSLIISD 191 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~--~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~-sG~~a~~~~~~al~~~g~~Vl~~ 191 (489)
++.+.+++.+.++++... ...++...+......++++.++++++.+ +.++++ +|++++..++.++.++|+.|++.
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~ 92 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITT 92 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEEC
Confidence 457888888888876421 1111111112366789999999999975 356664 55667777788888999999999
Q ss_pred CCCchHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHH
Q 046230 192 SLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEI 262 (489)
Q Consensus 192 ~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i 262 (489)
.+.|+++... ++..|.+++.++.+ |++++++.+++ ++.+|++..+.+++|.+.|+++|
T Consensus 93 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------------~~~~v~~~~~~n~tG~~~~~~~i 159 (376)
T TIGR01977 93 PMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT-------------NTKLIVVSHASNVTGTILPIEEI 159 (376)
T ss_pred cchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC-------------CCeEEEEECCCCCccccCCHHHH
Confidence 9999886543 34458888887654 67788877743 34466677889999999999999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC-cc-eEEEeCHHH-HHHHHhhCC----
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-CG-GYIAGSKEL-IQYLKYTCP---- 335 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-~G-G~i~~~~~~-~~~l~~~~~---- 335 (489)
.++|+++|+++|+|++|++|.. .+++...++|+++.+++|++++ .| |++..+++. +..+.....
T Consensus 160 ~~l~~~~~~~livD~a~~~g~~---------~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~ 230 (376)
T TIGR01977 160 GELAQENGIFFILDAAQTAGVI---------PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHS 230 (376)
T ss_pred HHHHHHcCCEEEEEhhhccCcc---------CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccc
Confidence 9999999999999999997754 2333334569999999999854 35 555544432 111111000
Q ss_pred -----------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC----CCC
Q 046230 336 -----------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN----DSP 399 (489)
Q Consensus 336 -----------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~----~~~ 399 (489)
.+. ..+.+...+++..++|+.+... ..+...++..++.+++++.|+++ ++.+..+. ..+
T Consensus 231 ~~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~----g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (376)
T TIGR01977 231 ALIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKI----GIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVG 305 (376)
T ss_pred ccccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCC
Confidence 011 1235666777888889887421 34677889999999999999876 67766431 356
Q ss_pred eEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCc-------CCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 400 VMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPAT-------PLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~-------~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
++.+.+. .....++.+.|.++ ||.+....+... +...+.+|+++...+|++|+++++++|++
T Consensus 306 ~v~~~~~-~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 306 VVSFTVE-GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEEEC-CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6766664 33567899999988 999885332211 12356899999999999999999999975
No 223
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=5.9e-23 Score=206.97 Aligned_cols=319 Identities=15% Similarity=0.122 Sum_probs=219.4
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SA 176 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~ 176 (489)
..++||+.+ |.++. ++.+.+++.+.+.... .. +... ..+|++.+|++++.+ +.|++++|++.. ..
T Consensus 22 ~~~i~l~~~~n~~~~---~~~~~~a~~~~~~~~~-~Y-------~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~ 89 (360)
T PRK07392 22 DAILDFSASINPLGP---PESVIAAIQSALSALR-HY-------PDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTW 89 (360)
T ss_pred ccEEEeCCcCCCCCC---CHHHHHHHHHHHHHhh-cC-------CCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 357888744 43332 3678888877665411 11 1111 368999999999753 678888888776 55
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
++.++. +++.|+++.|+|..+...++..|++++.++.++ ..+++++.... .++.++++.+.
T Consensus 90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~nP 157 (360)
T PRK07392 90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-----------TPNDGLLLNNP 157 (360)
T ss_pred HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-----------cCCCEEEEeCC
Confidence 666654 678999999999999999999999998887641 23455544321 12345555677
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---eEEEeCH
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK 324 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~ 324 (489)
++++|.+.+.++|.++++++++ +|+||+|. .|...+.. ..... +..+.-|+++||||.||.+| ||+++++
T Consensus 158 ~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~--~~~~~~~~~s~~~~~--~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 158 HNPTGKLWSREAILPLLEQFAL-VVVDEAFM--DFLPPDAEQSLIPCL--AEYPNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred CCCCCCCcCHHHHHHHHHHCCE-EEEECchh--hhccCccccchHHHh--hcCCCEEEEEechhhhcCCchheeeeeCCH
Confidence 9999999999999999999986 66699998 76554432 11112 22223588999999999779 9999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPI 403 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~ 403 (489)
++++.+...... + +.+.+.+.++.++|+.- ...+..++.++++.+.+.+.|+++ |+.+.+ .+++++++
T Consensus 233 ~~~~~~~~~~~~--~--~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~ 301 (360)
T PRK07392 233 DRLQRWQQWRDP--W--PVNGLAAAAAIAALADR------DFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLV 301 (360)
T ss_pred HHHHHHHhhCCC--C--CCCHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEE
Confidence 999888754432 2 36777777777776521 134455667788889999999887 777654 55666665
Q ss_pred EeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 404 MLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 404 ~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+. ....++.+.++ ++||.+.+.... .+.+.+++||+++ +.++.+++.++|++++
T Consensus 302 ~~~--~~~~~l~~~ll~~~gv~v~pg~~f-~~~~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 302 QSQ--GSALQLQEKLLQQHRILIRDCLSF-PELGDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred EcC--CCHHHHHHHHHhhCCEEEEeCCCC-CCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 553 35678888865 469999974322 2234579999995 3455566666666554
No 224
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2.9e-23 Score=212.49 Aligned_cols=318 Identities=12% Similarity=0.103 Sum_probs=214.5
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccC--CCcchhHHHHHHHHHHHhCCC-CEEEeCccH-HHHHHhHhhhcCC--
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVD--GGTLMVHNELEECVARFVGKP-AAIVFGMGY-VTNSAILPVLMRK-- 184 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~~~~al~~~-- 184 (489)
.|.. ++.+.+++.+.+..++......... .+......++++ + +++|.+ +.++|++|+ +++..++.++.++
T Consensus 36 ~g~~--p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~ 111 (406)
T TIGR01814 36 LGLM--PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTP 111 (406)
T ss_pred cCcC--cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcC
Confidence 5543 5788899988888775433222111 122333444444 4 788864 556665555 4446666766544
Q ss_pred -CCEEEEcCCCchHHHHH----HHhcCCeE----EEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 185 -GSLIISDSLNHNSIVNG----ARGSGATI----RVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 185 -g~~Vl~~~~~h~~~~~~----~~~~g~~~----~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
++.|+++...|++.... ++..|+++ +.++.+ |++++++.++.. ..++.+|++..+.
T Consensus 112 ~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~----------~~~t~lv~~~~v~ 181 (406)
T TIGR01814 112 KRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKN----------GDDIAVILLSGVQ 181 (406)
T ss_pred CccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhc----------CCCeEEEEEeccc
Confidence 34788999999985443 34557776 344332 678888877641 1256688889999
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEEEeCHHHHHH
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKELIQY 329 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~~~~~~ 329 (489)
+++|.+.|+++|.++|+++|+++++|++|++|.+ .+++...++|++++|.+|++ |++||.+...++..+.
T Consensus 182 ~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~---------~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~~~~~ 252 (406)
T TIGR01814 182 YYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV---------PLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEKHAHT 252 (406)
T ss_pred cccceecCHHHHHHHHHHcCCEEEEEcccccCCc---------ccccccCCCCEEEEcCccccCCCCCeEEEEehhhhhh
Confidence 9999999999999999999999999999997754 24444456799999999998 4556544443332322
Q ss_pred HHhhCCCc-------------cc--------ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 330 LKYTCPAH-------------LY--------ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 330 l~~~~~~~-------------~~--------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
+.....++ .+ ..+.|...++++.++|+++... ..++..++..++.+++++.|+++
T Consensus 253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~~l~~~l~~~ 328 (406)
T TIGR01814 253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA----GMEALRKKSLLLTDYLEELIKAR 328 (406)
T ss_pred cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHhh
Confidence 32211110 00 1134566788888899988421 35778889999999999999875
Q ss_pred -----CCeeeCCC----CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee-cCCCCHHHHHHHHH
Q 046230 389 -----GFEVLGDN----DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICI-SASHTKEDLIKALE 458 (489)
Q Consensus 389 -----g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~ 458 (489)
++.+.++. .++++.+.+. ....++.+.|.++||.+.. ...+.+|+++ +..+|++|||++++
T Consensus 329 ~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~-------~~~~~iRiS~~~~~nt~~did~l~~ 399 (406)
T TIGR01814 329 CGGPPVLTIITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDK-------REPSVIRVAPVPLYNTFVDVYDAVN 399 (406)
T ss_pred cCCCCceEEeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEec-------cCCCeEEEechhccCCHHHHHHHHH
Confidence 36666542 2456666554 4567899999999998751 2235899999 57899999999999
Q ss_pred HHHHHH
Q 046230 459 VISRVG 464 (489)
Q Consensus 459 ~l~~~~ 464 (489)
+|++++
T Consensus 400 ~l~~~~ 405 (406)
T TIGR01814 400 VLEEIL 405 (406)
T ss_pred HHHHHh
Confidence 998764
No 225
>PRK05839 hypothetical protein; Provisional
Probab=99.93 E-value=5.6e-23 Score=208.05 Aligned_cols=323 Identities=15% Similarity=0.127 Sum_probs=210.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C---CCCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G---KPAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g---~~~~i~~~sG~ 171 (489)
|+.++||+.+. ..++. ++.+.+++.+.... ...+....|. .+|++.+|+++ | .++.|++++|+
T Consensus 23 ~~~~i~l~~~~-p~~~~-~~~~~~a~~~~~~~----~~~Y~~~~G~----~~lr~aia~~l~~~~g~~~~~~~I~it~G~ 92 (374)
T PRK05839 23 EYKGLDLTIGE-PQFET-PKFIQDALKNNAHL----LNKYPKSAGE----ESLREAQRGFFKRRFKIELKENELIPTFGT 92 (374)
T ss_pred CCCeEEcCCCC-CCCCC-CHHHHHHHHHHhhc----cCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 67899997543 12332 34555555544322 1111112244 45666666554 5 25778889998
Q ss_pred HHH-HHhHhhhc--CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTN-SAILPVLM--RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~-~~~~~al~--~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+.. ..++.+++ ++|+.|+++.|+|..+...++..|++++.++.+ +++..+..++ +.+++
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~-------------~~k~v 159 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQ-------------EVDLV 159 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhc-------------cccEE
Confidence 776 45556553 578999999999999999999999999998764 1121111111 24445
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--ccccc---CCCCCCccEEEcccccccCC
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELL---EVDTADVDIMMGTFTKSFGS 315 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~---~v~p~~~Di~~~t~sK~~g~ 315 (489)
++ .+.+|++|.+.+ +++|+++|+++|++||+||+|. .+...+.. ..... +....+.-|+++||||.|+.
T Consensus 160 ~i-~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~--~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 236 (374)
T PRK05839 160 IL-NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS--EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSA 236 (374)
T ss_pred EE-eCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh--hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCC
Confidence 54 478999998866 7888899999999999999998 55322221 11110 01111235889999999998
Q ss_pred cc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee
Q 046230 316 CG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV 392 (489)
Q Consensus 316 ~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v 392 (489)
+| ||+++++++++.+........++ .+.+.+.++.+++.. ....++.+++++++.+.+.+.| +..
T Consensus 237 ~GlRiG~ii~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~l---~~~- 304 (374)
T PRK05839 237 PGLRSGFIAGDASILKKYKAYRTYLGCA--SPLPLQKAAAVAWLD------DEHAEFFRNIYAKNLKLAREIL---GIT- 304 (374)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcCCC--CChHHHHHHHHHhcc------chHHHHHHHHHHHHHHHHHHhc---CCC-
Confidence 89 99999999999887654322222 444555555544421 2255667778888877777655 333
Q ss_pred eCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 393 LGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPAT-PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.+.+++++++.+. ...+++++|++ +||.+.|..+... ..+.+++||+++ .+++++++++++|.++++
T Consensus 305 -~p~gg~fi~~~~~---~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 305 -IPPATFYVWLPVD---NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred -CCCeeEEEEEeCC---ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 3445666666554 34678888876 8999998543222 123589999994 579999999999998764
No 226
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.2e-22 Score=207.17 Aligned_cols=325 Identities=17% Similarity=0.162 Sum_probs=234.1
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CE-EEeCccHHHHHHhHhhhcCCCCEEEEcCC
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AA-IVFGMGYVTNSAILPVLMRKGSLIISDSL 193 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~-i~~~sG~~a~~~~~~al~~~g~~Vl~~~~ 193 (489)
|..+.+++.+++.+...+.. ..+..++..++++.++++++.+ +. ++.++|++++..++..+.++||.|++..+
T Consensus 17 P~~~~~~V~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~ 92 (401)
T PLN02409 17 PVNIPERVLRAMNRPNEDHR----SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRI 92 (401)
T ss_pred CCCCCHHHHHHhcCCCCCCC----CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCC
Confidence 44566677777665433321 1234667788999999999874 33 44577788778788888899999999888
Q ss_pred CchHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHH-
Q 046230 194 NHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAI- 265 (489)
Q Consensus 194 ~h~~~~--~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l- 265 (489)
.|.+.. ..++..|++++.++.+ |++++++.+++.. + .+..+|++..+.+++|.+.|+++|.++
T Consensus 93 ~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~-------~--~~~k~v~~~~~~~~tG~~~~~~~i~~l~ 163 (401)
T PLN02409 93 GQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDT-------N--HKIKAVCVVHNETSTGVTNDLAGVRKLL 163 (401)
T ss_pred CchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCc-------C--CCccEEEEEeecccccccCCHHHHHHHH
Confidence 886653 4556678888887654 6788888876410 0 123455556667789999999999999
Q ss_pred -HHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCCC-cc---
Q 046230 266 -CKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCPA-HL--- 338 (489)
Q Consensus 266 -~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~~-~~--- 338 (489)
|+++|+++|+|++|++|.+ ..+++..++|+++.|.+|+|+ ++| |+++.+++.++.+...... ..
T Consensus 164 ~~~~~g~~~vvD~v~s~g~~---------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
T PLN02409 164 DCAQHPALLLVDGVSSIGAL---------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDW 234 (401)
T ss_pred hhhccCcEEEEEcccccCCc---------cccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCH
Confidence 9999999999999996532 233333456999999999994 467 9999999988887643211 00
Q ss_pred -----------c-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---CCC-eEE
Q 046230 339 -----------Y-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN---DSP-VMP 402 (489)
Q Consensus 339 -----------~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~---~~~-~~~ 402 (489)
+ ..+.+.....++.++|+.+.. ...++..++.+++.+++++.|+++|+.+..+. .++ +.+
T Consensus 235 ~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~----~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~ 310 (401)
T PLN02409 235 ADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFE----EGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTA 310 (401)
T ss_pred HHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEE
Confidence 0 113455567888889998742 14677889999999999999999998876542 233 344
Q ss_pred EEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 403 IMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
+.++...+..++.+.|.++ ||.+..... +..+..+|++....+|.+|+..++++|++++.+++.+
T Consensus 311 ~~~p~~~~~~~l~~~l~~~~~i~i~~G~~---~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~~ 376 (401)
T PLN02409 311 VVVPEGIDSAEIVKNAWKKYNLSLGLGLN---KVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGYP 376 (401)
T ss_pred EeCCCCCCHHHHHHHHHHhCCEEEEcCCC---cccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 5455555667888887655 998884221 2235789999988999999999999999999998855
No 227
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.5e-22 Score=205.06 Aligned_cols=322 Identities=17% Similarity=0.182 Sum_probs=218.8
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC---------CCEEEeCccH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK---------PAAIVFGMGY 171 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---------~~~i~~~sG~ 171 (489)
.+++|+++.. .++. ++.+.+++.+.+.. +.....+ ...|. .+|++.+|++++. ++.|++++|+
T Consensus 29 ~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~Y-~~~G~----~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga 100 (374)
T PRK02610 29 QLDRLDTNEF-PYDL-PPDLKQKLAWLYQQ-GIESNRY-PDGGH----EALKQAIAEYVNESAAGSSQITPANISVGNGS 100 (374)
T ss_pred ceeEecCCCC-CCCC-CHHHHHHHHHHHhh-cccccCC-CCCch----HHHHHHHHHHhCccccccCCCCHHHEEEcCCh
Confidence 5888875532 2322 36788888877664 1111111 11233 7899999999872 3568889888
Q ss_pred HHH-HHhHhhhcCCCC-EEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTN-SAILPVLMRKGS-LIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~-~~~~~al~~~g~-~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
... ..++.+++.+++ .|+++.|+|..+...++..|++++.++.+ |+++|++.++.... ++.+++
T Consensus 101 ~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--------~~~k~i 172 (374)
T PRK02610 101 DELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN--------PPVRVV 172 (374)
T ss_pred HHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC--------CCceEE
Confidence 776 556666666775 89999999999999999999999888743 67888887754100 124555
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHH-cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eE
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKK-YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GY 319 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~-~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~ 319 (489)
+++ +.++++|...+.+++.++.+- ++++||+||+|. .|... ..... +...+.-|+++||||++|.+| ||
T Consensus 173 ~l~-~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~--~~~~~--~~~~~--~~~~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 173 FVV-HPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF--EFSQT--TLVGE--LAQHPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred EEe-CCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc--ccCcc--chHHH--HhcCCCEEEEEecchhccCcccceee
Confidence 555 569999999886555554421 489999999998 55321 11111 111122478899999999889 99
Q ss_pred EEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCC
Q 046230 320 IAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDS 398 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~ 398 (489)
+++++++++.+...... ++ .+.+.+.++.++|+.. ....+.+.+..+..+.+.+.|+++ ++.+. +.++
T Consensus 246 ~v~~~~l~~~l~~~~~~--~~--~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g 314 (374)
T PRK02610 246 AIGHPELIAVLEKVRLP--YN--LPSFSQLAAQLALEHR------QELLAAIPEILQERDRLYQALQELPQLRVW-PSAA 314 (374)
T ss_pred eecCHHHHHHHHHhcCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcc
Confidence 99999999998776532 33 5666666666665421 122233334444567788888877 66654 4567
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++++.+.......++.+.|.++||.+.+ ..+++||+++ +.+++++++++|.++++.+
T Consensus 315 ~f~~~~l~~~~~~~~~~~~l~~~gi~v~~--------~~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 315 NFLYLRLSQDAALAALHQALKAQGTLVRH--------TGGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred eEEEEeCCCCCCHHHHHHHHHHCCEEEEe--------CCCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 77777776555678899999999999873 2368999985 3678899999999887654
No 228
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=1.8e-23 Score=211.06 Aligned_cols=283 Identities=21% Similarity=0.245 Sum_probs=208.8
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHH
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSH 219 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~ 219 (489)
.++.+.+|++++|++.|.+++++++||++|+..++.++.++||.|+++.+.|+++... +...|+++..++.+|+++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 117 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA 117 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 4577899999999999999999999999999999999999999999999999886543 346788999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
+++.++. ++.+|++|+++|++|.+.++++|.++|++||+++|+|++|+.+.+. ..+.
T Consensus 118 l~~~i~~-------------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-------~~~~--- 174 (369)
T cd00614 118 LEAAIKP-------------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-------RPLE--- 174 (369)
T ss_pred HHHhcCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-------Chhh---
Confidence 9888753 3457788999999999999999999999999999999999854331 1111
Q ss_pred CCccEEEcccccccCCc----ceEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSC----GGYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~----GG~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
.++|+++.|++|.+++. ||++++++ ++++.++..... ++..++|..+++++..|+. .+.++++.
T Consensus 175 ~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~g~~~~p~~a~~~l~~l~t---------l~~r~~~~ 243 (369)
T cd00614 175 LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLA--LGTILSPFDAWLLLRGLKT---------LPLRMERH 243 (369)
T ss_pred hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHh--hCCCCCHHHHHHHHcCCCC---------HHHHHHHH
Confidence 23499999999999854 49999977 888888765432 4556889888887777664 36678899
Q ss_pred HHHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeC-CCCcHHHHHHHHhhCCceEEe------ec
Q 046230 375 RENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLY-NPAKIPAFSRECLRQNVAVVT------VA 429 (489)
Q Consensus 375 ~~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~------~~ 429 (489)
.++..++.+.|++.+ +. | ++ ...+.++++.+. ......+|.+.|.--++.+.- +.
T Consensus 244 ~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~ 323 (369)
T cd00614 244 SENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVE 323 (369)
T ss_pred HHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeee
Confidence 999999999999874 21 1 11 124778888875 333344554444322111110 01
Q ss_pred CCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 430 FPAT--------------PLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 430 ~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.|.. ....+.+|+++.. ||.+.+++.|++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 324 HPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 1110 1124689999964 67777888877765
No 229
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-22 Score=205.03 Aligned_cols=319 Identities=18% Similarity=0.192 Sum_probs=223.1
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~ 175 (489)
+..+|||+.+ +.+ + .++.+.+++.+...... . ++.... .+|++.+|++++.+ +.|++++|++.. .
T Consensus 35 ~~~~i~l~~~~~~~--~-~~~~~~~al~~~~~~~~-~-------Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 102 (371)
T PRK05166 35 VPRIAKLGSNENPL--G-PSPAVRRAFADIAELLR-L-------YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIA 102 (371)
T ss_pred CcceEEcCCCCCCC--C-CCHHHHHHHHHHHHHhh-c-------CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 4578999755 333 2 13567777765433311 1 111122 37999999999864 678888887765 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++.++||.|++..|.|..+...++..|++++.++.+ |++++++.++. ..+ +|++.+.+
T Consensus 103 ~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~------------~~~-~v~l~~p~ 169 (371)
T PRK05166 103 VICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR------------APR-MLMFSNPS 169 (371)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc------------CCC-EEEEeCCC
Confidence 6778888999999999999999988888999999888764 67788877754 234 45567789
Q ss_pred CCCCCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---eEEEe-
Q 046230 251 SMEGELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG- 322 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~- 322 (489)
+++|.+.+.+++.++++. .++++|+||+|. .+-..+.. ...... ...+..|+++||||.||.+| ||++.
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~-~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 170 NPVGSWLTADQLARVLDATPPETLIVVDEAYA--EYAAGDDYPSALTLLK-ARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECcHH--HhcCCcCcccHHHHHh-hcCCCEEEEeechHhhhcchhheeeeecC
Confidence 999999887666665553 478999999998 55432221 111111 11122588999999999779 99764
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEE
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMP 402 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~ 402 (489)
++++++.+...... ++ .+.+.++++.+.|.. .++.++.++.++++.+.+.+.|++.|+.+.+ .++.+++
T Consensus 247 ~~~l~~~~~~~~~~--~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~~g~fl~ 315 (371)
T PRK05166 247 DPELVGLLDRVRTP--FN--VNGAAQAAALAALDD------EEHLAKGVALALAERERLKKELAEMGYRIAP-SRANFLF 315 (371)
T ss_pred CHHHHHHHHHhccC--CC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC-CcCCEEE
Confidence 78888888755432 33 666776667776642 1255677788888899999999999887644 4566666
Q ss_pred EEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 403 IMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+.+ +....++.+.|+++||.+.+...+ ...+++||+++ +.++.++++++|++++
T Consensus 316 ~~~--~~~~~~l~~~l~~~gi~v~p~~~~---~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 316 FDA--RRPASAVAEALLRQGVIVKPWKQP---GFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred EeC--CCCHHHHHHHHHHCCeEEecCCCC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 554 334678999999999999874332 23689999995 5777888888887654
No 230
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.92 E-value=2.6e-22 Score=206.57 Aligned_cols=342 Identities=15% Similarity=0.131 Sum_probs=230.2
Q ss_pred cceeEecccccc-cCCCCC--CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHH
Q 046230 99 VNRCLNLGSYNY-LGFAAS--DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNS 175 (489)
Q Consensus 99 g~~~id~~s~~~-lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~ 175 (489)
|..+++|.+.+. ..+... ...+.+++.+++..-...+ +......+|+++++++++.+.++++++|++++.
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y-------~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~ 107 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAY-------AGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQ 107 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCccc-------CCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHH
Confidence 677888875543 244421 1146777777775411111 223344899999999999998888889999998
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---------------NTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
.++.++.++|| |++..+.|.++...+...|++++.++. -|+++|++.+.+. ++.+
T Consensus 108 ~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~---------~~~~ 177 (460)
T PRK13238 108 ILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEV---------GAEN 177 (460)
T ss_pred HHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhc---------CCCc
Confidence 88999999999 888899888888888899998887653 2678888888642 1124
Q ss_pred cEEEEEcCcCCCCC-CCCC---hHHHHHHHHHcCcEEEEEccccccc--cc------CCCCccccccCCCCCCccEEEcc
Q 046230 241 KIMVIVEGIYSMEG-ELCK---FPEIIAICKKYKAYIYLDEAHSIGA--VG------KTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 241 ~~~vive~v~s~~G-~~~~---l~~i~~l~~~~~~~li~DEa~s~g~--~g------~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
+.+|+++...|++| .+.+ +++|.++|++||++||.|++|..+. +. ..+..+.+..-..-.-.|++..|
T Consensus 178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~S 257 (460)
T PRK13238 178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMS 257 (460)
T ss_pred eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEe
Confidence 56777777778876 5544 7899999999999999999886321 21 11211111100000123788778
Q ss_pred ccccc-CCcceEEEeC-HHHHHHHHhhC---CCc-ccccCCCHHH-HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHH
Q 046230 309 FTKSF-GSCGGYIAGS-KELIQYLKYTC---PAH-LYATSISPPA-AEQIISAIKVILGEDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 309 ~sK~~-g~~GG~i~~~-~~~~~~l~~~~---~~~-~~~~~~~p~~-~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (489)
..|.+ ++.||+++++ +++++.++... +++ +|+ +.+.. ++|+..+|+.. ..++..+...++.++|
T Consensus 258 g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~--g~~~~~~~Ala~~l~e~-------~~~~~~~~~~~~~~~l 328 (460)
T PRK13238 258 AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYG--GLAGRDMEALAVGLYEG-------MDEDYLAYRIGQVEYL 328 (460)
T ss_pred cccCCCCcceeEEEcChHHHHHHhhhcccccCCccccc--CcHHHHHHHHHhhHHHh-------hChHHHHHHHHHHHHH
Confidence 88865 4447899887 68888887653 222 333 44444 44444455433 1234444445567999
Q ss_pred HHHHHhCCCeeeCCCCCCeEEEEeCCC--------CcHHHHHHHHhhC-CceEEeecC---CCcCC-------CCCeEEE
Q 046230 382 RSELQKMGFEVLGDNDSPVMPIMLYNP--------AKIPAFSRECLRQ-NVAVVTVAF---PATPL-------LLARARI 442 (489)
Q Consensus 382 ~~~L~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~-Gi~v~~~~~---p~~~~-------~~~~iRi 442 (489)
.+.|++.|+++..+.+++.+.+.+..- ....+|+.+|+++ ||.+.+.+. +-.+. ..+.+||
T Consensus 329 ~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rl 408 (460)
T PRK13238 329 GEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRL 408 (460)
T ss_pred HHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEE
Confidence 999999999999888887766655321 1246788888876 999998442 21111 1479999
Q ss_pred eecC-CCCHHHHHHHHHHHHHHHHH
Q 046230 443 CISA-SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 443 ~~~~-~~t~edid~~l~~l~~~~~~ 466 (489)
+++- ..|.+++|.+.++|.++.++
T Consensus 409 a~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 409 AIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred ecccccCCHHHHHHHHHHHHHHHHh
Confidence 9972 35999999999999987744
No 231
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=5.8e-23 Score=210.01 Aligned_cols=334 Identities=17% Similarity=0.217 Sum_probs=220.6
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCC-cc-cCCCcchhHHHHHHHHHHHhCCC-CEEEeC-ccHHHHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCS-SR-VDGGTLMVHNELEECVARFVGKP-AAIVFG-MGYVTNS 175 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~-~~-~~~g~~~~~~~l~~~la~~~g~~-~~i~~~-sG~~a~~ 175 (489)
+-|+|.++ .+.-++.+.+++.+.++........ .. ......+..+++++.+++++|.+ +.++++ +|++++.
T Consensus 4 ~~yld~aa-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~ 78 (402)
T TIGR02006 4 PIYLDYAA-----TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNN 78 (402)
T ss_pred cEEeeCCc-----CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHH
Confidence 34666542 2223678888888877653211110 00 00011345678899999999964 456665 5556665
Q ss_pred HhHhhh----cCCCCEEEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 176 AILPVL----MRKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 176 ~~~~al----~~~g~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.++.++ .++|+.|+++...|.++...+ +..|++++.++.+ |++++++.+.+ ++.+
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~l 145 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD-------------DTIL 145 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CCEE
Confidence 555554 368899999999999876554 3458888887654 67788777643 3557
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEe
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAG 322 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~ 322 (489)
|++..+++++|.+.|+++|.++|+++|+++++|++|++|.+. +++....+|+++.|.+|.+|+.| |+++.
T Consensus 146 v~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~ 216 (402)
T TIGR02006 146 VSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGALYV 216 (402)
T ss_pred EEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEEEE
Confidence 778889999999999999999999999999999999966441 22222345999888889998777 88877
Q ss_pred CHHHHHHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC
Q 046230 323 SKELIQYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN 396 (489)
Q Consensus 323 ~~~~~~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~ 396 (489)
+++..+.+.....+ .....+.+...+++..++|+.++. ..+...++.+++.+++++.|+++ ++.+.++.
T Consensus 217 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~ 291 (402)
T TIGR02006 217 RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKE-----EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDL 291 (402)
T ss_pred ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCc
Confidence 75433322221111 011124566677777788888742 45677888999999999999887 56555432
Q ss_pred --CCC-eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc----------------CCCCCeEEEeecCCCCHHHHHHHH
Q 046230 397 --DSP-VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT----------------PLLLARARICISASHTKEDLIKAL 457 (489)
Q Consensus 397 --~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~----------------~~~~~~iRi~~~~~~t~edid~~l 457 (489)
..+ ++.+.+. .....++...+ +++.+........ ....+.+|+++...+|++|+|+++
T Consensus 292 ~~~~p~~~~v~f~-~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~ 368 (402)
T TIGR02006 292 EHRVPGNLNVSFN-YVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV 368 (402)
T ss_pred cccCCCeEEEEEe-CcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 222 2222222 23344555544 4666554211110 012378999999999999999999
Q ss_pred HHHHHHHHHhC
Q 046230 458 EVISRVGDLVG 468 (489)
Q Consensus 458 ~~l~~~~~~~~ 468 (489)
++|+++++.+.
T Consensus 369 ~~l~~~~~~~~ 379 (402)
T TIGR02006 369 KLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHH
Confidence 99999987763
No 232
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=1.5e-22 Score=203.53 Aligned_cols=284 Identities=19% Similarity=0.195 Sum_probs=208.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TP 217 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~ 217 (489)
.+...++++.+++++|.+.++++++|++++..++.++ .++|+.|+++.+.|.++...+...|++++.++.+ |+
T Consensus 17 ~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 96 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDP 96 (352)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCH
Confidence 4556899999999999988889999999998888887 5899999999999999999999999998887543 67
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC
Q 046230 218 SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV 297 (489)
Q Consensus 218 ~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v 297 (489)
+++++.+.. +.++++ +. ++.|...++++|.++|+++|+++|+|++|++|.... ++ ..+.
T Consensus 97 ~~l~~~i~~------------~~~~v~-~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~-~~----~~~~ 155 (352)
T cd00616 97 ELIEAAITP------------RTKAII-PV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK-GR----KVGT 155 (352)
T ss_pred HHHHHhcCc------------CCeEEE-EE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC-CE----Eccc
Confidence 777776632 234444 33 347888999999999999999999999999765421 21 1121
Q ss_pred CCCCccEEEcccc--cccCC-cceEEEeC-HHHHHHHHhhCC-C------------cccccCCCHHHHHHHHHHHHHHHc
Q 046230 298 DTADVDIMMGTFT--KSFGS-CGGYIAGS-KELIQYLKYTCP-A------------HLYATSISPPAAEQIISAIKVILG 360 (489)
Q Consensus 298 ~p~~~Di~~~t~s--K~~g~-~GG~i~~~-~~~~~~l~~~~~-~------------~~~~~~~~p~~~aa~~a~L~~i~~ 360 (489)
.. |+.+.|++ |+++. .||+++.+ +++.+.++.... + ..+...+++..++.++..++.+
T Consensus 156 ~~---d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~-- 230 (352)
T cd00616 156 FG---DAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL-- 230 (352)
T ss_pred Cc---ceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--
Confidence 12 56665776 99953 35777765 577766543211 0 0112346777777777666643
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC-----CCeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCC
Q 046230 361 EDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND-----SPVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPA 432 (489)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~-----~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~ 432 (489)
++..++.+++.+++++.|+++ |+.+..... .+++++.+.. .....++.+.|.++||.+.....|.
T Consensus 231 -------~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~ 303 (352)
T cd00616 231 -------DEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPL 303 (352)
T ss_pred -------HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCcc
Confidence 667788899999999999987 777654322 3466776654 4577889999999999887544443
Q ss_pred cCC--------------------CCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 433 TPL--------------------LLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 433 ~~~--------------------~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
... ..+.+|+++...+|++|+++++++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 304 HHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 211 12689999999999999999999873
No 233
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=1.8e-22 Score=203.01 Aligned_cols=321 Identities=12% Similarity=0.142 Sum_probs=223.0
Q ss_pred cceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHh
Q 046230 99 VNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAI 177 (489)
Q Consensus 99 g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~ 177 (489)
=+++||.++ .-.+|-..-++++.+++.+.++.|. +..++..++++.+++++|.+.++++++|++++..+
T Consensus 7 ~~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~~----------~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~a 76 (363)
T TIGR01437 7 LKKVINASGKMTILGVSTVSDEVADAQKRGAQNYF----------EIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQS 76 (363)
T ss_pred CceEEECCcEeecCCCCCCCHHHHHHHHHHHhcCC----------CHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHH
Confidence 367888754 3446666568889998888876542 24677889999999999998888888899999888
Q ss_pred HhhhcCCCC---------------EEEEcCCCchHH----HHHHHhcCCeEEEecCC---CHHHHHHHHHHHHhcCCCCC
Q 046230 178 LPVLMRKGS---------------LIISDSLNHNSI----VNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 178 ~~al~~~g~---------------~Vl~~~~~h~~~----~~~~~~~g~~~~~~~~~---d~~~Le~~l~~~~~~g~~~~ 235 (489)
+.++..+|| .|+++.+.+..+ ...+.+.|+.++.++.+ |++++++++.+
T Consensus 77 l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~--------- 147 (363)
T TIGR01437 77 VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITE--------- 147 (363)
T ss_pred HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcCh---------
Confidence 888888887 788877555433 45678889998887543 78899988865
Q ss_pred CCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG- 314 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g- 314 (489)
+.++++++....+++|.+.++++|.++|++||+++|+|++|+.. ..... .. +.|+++.|++|+++
T Consensus 148 ---~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~-----~~~~~---~~---g~D~~~~S~~K~l~g 213 (363)
T TIGR01437 148 ---KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED-----LQKYY---RL---GADLVIYSGAKAIEG 213 (363)
T ss_pred ---hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc-----hHHHH---Hc---CCCEEEEeCCcccCC
Confidence 34555556555667888999999999999999999999999721 01111 11 23899999999885
Q ss_pred CcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 046230 315 SCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL 393 (489)
Q Consensus 315 ~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~ 393 (489)
+.+|++++++++++.++....+...........+++..++++.+.. ...+..++..++.++++++|+++ |+.+.
T Consensus 214 p~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~-----~~~~~~~~~~~~~~~l~~~L~~i~g~~~~ 288 (363)
T TIGR01437 214 PTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS-----TGKESGAEMVAKLTPFIEALNTLKGVSAS 288 (363)
T ss_pred CceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc-----cCcccHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 4469999998888876543222111111112334555667776631 23445555556677899999988 87765
Q ss_pred CCCC--CC---eEEEEeCC---CCcHHHHHHHHhhCC--ceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 394 GDND--SP---VMPIMLYN---PAKIPAFSRECLRQN--VAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 394 ~~~~--~~---~~~~~~~~---~~~~~~~~~~l~~~G--i~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.... +. ...+.+.. .....++.+.|.++| |.+++ + ....+.+|+.+. ..+++|++.++++|+++
T Consensus 289 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~--~---~~~~~~~~l~~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 289 IVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRG--Y---KANEGIIEIDPR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred EecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee--e---eecCCeEEEEee-cCCHHHHHHHHHHHHHh
Confidence 3211 11 12233332 346789999998877 55543 2 123467999997 57799999999999875
No 234
>PLN02242 methionine gamma-lyase
Probab=99.92 E-value=4.2e-23 Score=210.27 Aligned_cols=288 Identities=12% Similarity=0.134 Sum_probs=206.5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH-----HhcCCeEEEecCCCHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA-----RGSGATIRVFQHNTPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~-----~~~g~~~~~~~~~d~~~ 219 (489)
.+...+|++++|++.|.+.++++++|++++..++.++.++||.|+++.+.|+.+...+ +..|++++.++..|+++
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~ 154 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEA 154 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHH
Confidence 5667899999999999999999999999999899999999999999999988775543 34688888888889999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
++++++. .++.+|++++++|++|.+.++++|+++|++||++||+||+|+...+. ...
T Consensus 155 l~~~i~~------------~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~--------~~~--- 211 (418)
T PLN02242 155 VKKAVVP------------GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLS--------PAR--- 211 (418)
T ss_pred HHHhcCc------------CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCC--------HHH---
Confidence 9887753 23557788999999999999999999999999999999999832221 111
Q ss_pred CCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCC--cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPA--HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~--~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
.+.||++.||||.+++.| |++++++++++.++..... ...+..++|..++.+...++ ....++++
T Consensus 212 ~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~---------tl~~r~~~ 282 (418)
T PLN02242 212 LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP---------HLSLRMKE 282 (418)
T ss_pred cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC---------cHHHHHHH
Confidence 124899999999997654 9999999999988765442 22343455555554444333 34567889
Q ss_pred HHHHHHHHHHHHHhCCCeeeCC-------------------CCCCeEEEEeCCCCcHHHHHHHHhhC----CceEEeecC
Q 046230 374 IRENSNFFRSELQKMGFEVLGD-------------------NDSPVMPIMLYNPAKIPAFSRECLRQ----NVAVVTVAF 430 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~g~~v~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~~----Gi~v~~~~~ 430 (489)
..++++++.+.|+++++.+.-+ ..+.++.+.+.......+|.+.+.-- .+.+.-.++
T Consensus 283 ~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~ 362 (418)
T PLN02242 283 HCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYY 362 (418)
T ss_pred HHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCCC
Confidence 9999999999999987766522 12446666665433445666665411 111111111
Q ss_pred ------CCc--------------CCCCCeEEEeecCCCCHH-HHHHHHHHHHHHHHHhC
Q 046230 431 ------PAT--------------PLLLARARICISASHTKE-DLIKALEVISRVGDLVG 468 (489)
Q Consensus 431 ------p~~--------------~~~~~~iRi~~~~~~t~e-did~~l~~l~~~~~~~~ 468 (489)
|.. ....+.+||++.. | +.|.+++-|+++++.+.
T Consensus 363 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 363 ETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHhh
Confidence 110 0124689999864 4 36667777777776653
No 235
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=4.9e-22 Score=199.49 Aligned_cols=319 Identities=13% Similarity=0.174 Sum_probs=218.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-HH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-SA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~~ 176 (489)
+..++||+.+.. .++ .++.+.+++.+.+..... . +......++++.+|++++. ++.|++++|++.. ..
T Consensus 21 ~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~-Y-------~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 21 GPGLLDFAVNVR-HDT-PPEWLRERLAARLGDLAA-Y-------PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CCCeEEecCCCC-CCC-CCHHHHHHHHHHhhHhhc-C-------CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 467999974421 122 136678888887755311 1 1112237899999999985 4688888888776 44
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCH--HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTP--SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~--~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
++. ..+++ +++..|+|..+...++..|.+++.++.++- -+++ .+++ ..+ ++++.+.++++|
T Consensus 91 ~~~--l~~~~-viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~-~l~~------------~~~-~i~l~np~NPTG 153 (349)
T PRK07908 91 LAR--LRPRR-AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPA-AVPD------------DAD-LVVIGNPTNPTS 153 (349)
T ss_pred HHh--cCCCe-EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChh-Hhcc------------CCC-EEEEcCCCCCCC
Confidence 444 45654 556789999988888889999988876521 0112 1211 233 555677789999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHH
Q 046230 255 ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLK 331 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~ 331 (489)
.+.+.++|.++|++ +.++|+||+|+ .+- .+.. ......++.+ .|+++||||.+|.+| ||+++++++++.+.
T Consensus 154 ~~~~~~~l~~l~~~-~~~iIvDe~y~--~~~-~~~~-~~l~~~~~~~-~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~ 227 (349)
T PRK07908 154 VLHPAEQLLALRRP-GRILVVDEAFA--DAV-PGEP-ESLAGDDLPG-VLVLRSLTKTWSLAGLRVGYALGAPDVLARLT 227 (349)
T ss_pred CCcCHHHHHHHHhc-CCEEEEECcch--hhc-cCCc-cccccccCCC-EEEEeecccccCCccceeeeeecCHHHHHHHH
Confidence 99999999999975 77888899998 442 1221 1111122222 588899999999778 99999999999987
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcH
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKI 411 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~ 411 (489)
..... +. .+++..+++.+.++- ....+.++.+++++++.+++.+.|+++|+.+..+.+++++++.+.. .
T Consensus 228 ~~~~~--~~--~~~~~~~a~~~~~~~----~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~---~ 296 (349)
T PRK07908 228 RGRAH--WP--VGTLQLEAIAACCAP----RAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD---A 296 (349)
T ss_pred hcCCC--CC--ccHHHHHHHHHHhcc----cchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc---H
Confidence 65543 22 455555444443320 0112456778888999999999999988887776778877776653 4
Q ss_pred HHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 412 PAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
..+.+.|.++||.+.+..... ..+.+++||++ .+++++++++++|++++.
T Consensus 297 ~~~~~~l~~~gI~v~~g~~f~-~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 ELLRKRLRERGIAVRRGDTFP-GLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHHHhCCEEEEECCCCC-CCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 678888888999999733211 22457999999 478899999999988754
No 236
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.4e-22 Score=200.16 Aligned_cols=308 Identities=18% Similarity=0.159 Sum_probs=218.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC----CCEEEeCccHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK----PAAIVFGMGYVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~ 174 (489)
|+..|||+.+. -.++. ++.+.+++.+.+..-..+ .+.. ....+|++.+|++++. ++.|++++|+...
T Consensus 18 ~~~~i~l~~~~-~~~~~-p~~~~~~~~~~~~~~~~~---~Y~~----~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 18 KRDRTYLALNE-NPFPF-PEDLVDEVFRRLNSDTLR---IYYD----SPDEELIEKILSYLDTDFLSKNNVSVGNGADEI 88 (335)
T ss_pred CCceeEecCCC-CCCCC-CHHHHHHHHHHhhhhhhh---cCCC----CChHHHHHHHHHHhCCCCCCcceEEEcCCHHHH
Confidence 67899987542 12332 367888888776431111 0011 1247899999999973 5778888888765
Q ss_pred -HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 175 -SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 175 -~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
..++.++ +.|+++.|+|..+...++..|++++.++.++--.+.... . ..+.++++.+.+|++
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~------------~~~~~i~i~nP~NPT 151 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN-V------------GEGDVVFIPNPNNPT 151 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH-c------------cCCCEEEEeCCCCCC
Confidence 5666665 568889999999999999999999998765211111100 0 123466678899999
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHH
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYL 330 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l 330 (489)
|...+.+++.+++ +++++||+||+|. .|. +........- .+.-|+++||||++|.+| ||+++++++++.+
T Consensus 152 G~~~s~~~l~~l~-~~~~~ii~DE~Y~--~f~--~~~~~~~~~~--~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l 224 (335)
T PRK14808 152 GHVFEREEIERIL-KTGAFVALDEAYY--EFH--GESYVDLLKK--YENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAY 224 (335)
T ss_pred CCCcCHHHHHHHH-hcCCEEEEECchh--hhc--CCchHHHHHh--CCCEEEEEechhhccCcccceEEEEeCHHHHHHH
Confidence 9999999999998 5899999999998 663 2111111111 123588899999999879 9999999999999
Q ss_pred HhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCc
Q 046230 331 KYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 410 (489)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~ 410 (489)
...... ++ .+.+.+.++.++++.. ...++.++.+.++.+.+.+.|++.|+.+..+ .++++++.+.. ..
T Consensus 225 ~~~~~~--~~--~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~-~~ 292 (335)
T PRK14808 225 NRVRLP--FN--VSYVSQMFAKVALDHR------EIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEK-EE 292 (335)
T ss_pred HHhcCC--CC--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCC-cc
Confidence 765532 33 5666667676666532 1445667777788889999999999887654 56677777763 34
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
..++.+.|.++||.+..+ .+++|+++ -+.++.++++++|++
T Consensus 293 ~~~~~~~l~~~Gi~V~~~--------~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 293 KERLLEHLRAKNIAVRSF--------REGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred HHHHHHHHHHCCeEEEEC--------CCCeEEec---CCHHHHHHHHHHHHh
Confidence 478999999999999842 15799998 467899999999875
No 237
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.9e-22 Score=202.34 Aligned_cols=277 Identities=18% Similarity=0.222 Sum_probs=200.5
Q ss_pred HHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHH
Q 046230 149 NELEECVARFVGKP-AAIVFGMGYVTN-SAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHL 220 (489)
Q Consensus 149 ~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~L 220 (489)
.+|++.++++.|.+ +.|++++|+... ..++.++.++| +.|++..|+|..+...++..|++++.++.+ |++++
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l 139 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAI 139 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHH
Confidence 78999999999964 678888887665 77778888886 899999999999988899999999888654 56666
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
++.+. +.++ |++.+.++++|...+.+++.++++.. ++++|+||+|. .|.... ........
T Consensus 140 ~~~~~-------------~~~l-v~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~--~f~~~~-s~~~~~~~- 201 (351)
T PRK01688 140 ADNLD-------------GVKV-VYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI--EFCPQA-SLAGWLAE- 201 (351)
T ss_pred HHhcc-------------CCcE-EEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh--hcCCCC-ChHHHHhh-
Confidence 65542 2344 44557899999998876666665432 68999999998 664321 11122221
Q ss_pred CCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 299 TADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
.+.-|+++||||++|.+| ||+++++++++.+......+ . .+.+.++++.++|+.- .....++.++.+.
T Consensus 202 -~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--~--v~~~~~~~a~~~L~~~----~~~~~~~~~~~~~ 272 (351)
T PRK01688 202 -YPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--P--LSTPVADIAAQALSPQ----GIAAMRERVAEIN 272 (351)
T ss_pred -CCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--C--CCHHHHHHHHHHHhcc----hHHHHHHHHHHHH
Confidence 122588999999999889 99999999999988665432 2 5566666666666420 0124566677888
Q ss_pred HHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 376 ENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 376 ~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
++.+++.+.|+++ ++..+.+.++.++++.+. ...++.++|+++||.++..... +...+++|+++. +++|++
T Consensus 273 ~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~~l~~~L~~~gi~vr~~~~~--~~~~~~iRis~~---~~~e~~ 344 (351)
T PRK01688 273 ANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASSAVFKSLWDQGIILRDQNKQ--PGLSNCLRITIG---TREECQ 344 (351)
T ss_pred HHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEEECCCc--CCCCCeEEEeCC---CHHHHH
Confidence 8889999999988 554334455666666553 4678999999999999863211 123578999984 789999
Q ss_pred HHHHHH
Q 046230 455 KALEVI 460 (489)
Q Consensus 455 ~~l~~l 460 (489)
+++++|
T Consensus 345 ~l~~al 350 (351)
T PRK01688 345 RVIDAL 350 (351)
T ss_pred HHHHhh
Confidence 999887
No 238
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4e-22 Score=203.91 Aligned_cols=333 Identities=14% Similarity=0.102 Sum_probs=215.1
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEE--eCcc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIV--FGMG 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~--~~sG 170 (489)
+..+||+...+-.+. .++.+.+++.+++.+... ......|+......+|++.+|+++.. ++.++ .++|
T Consensus 29 ~~~i~l~~g~~~~~~-~~~~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 29 PSKVNLGIGAYRDEN-GKPYVLESVRKAEKIIAE--KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred cccEecccceeECCC-CCEehhhHHHHHHHHhcc--ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 467898733322222 123456777776644221 01112223334447899999998632 24555 2445
Q ss_pred H-HHHHHhH---hhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 171 Y-VTNSAIL---PVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 171 ~-~a~~~~~---~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
+ ++...++ .++.++||.|++++|+|..+...++..|++++.++. + |++.+++.+++. ..
T Consensus 106 ~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~----------~~ 175 (404)
T PTZ00376 106 GTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA----------PN 175 (404)
T ss_pred cchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhC----------CC
Confidence 4 4433333 467899999999999999999999999999999886 2 678888877642 02
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC--ccccccCCCC-CCccEEEccccccc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR--GVCELLEVDT-ADVDIMMGTFTKSF 313 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~--~~~~~~~v~p-~~~Di~~~t~sK~~ 313 (489)
++.++++.+.+||+|.+.+ +++|+++|++|+++||+||+|. .+...+. .......... .+.-|+++||||.|
T Consensus 176 ~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~ 253 (404)
T PTZ00376 176 GSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ--GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM 253 (404)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc--CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 3567878999999998866 7788999999999999999998 6654331 0001111111 11248899999999
Q ss_pred CCcc---eEE---EeCHHHHHHHH----hhCCCcccccCCCHHHHHHHHHHHHHHH-ccCCCchHHHHHHHHHHHHHHHH
Q 046230 314 GSCG---GYI---AGSKELIQYLK----YTCPAHLYATSISPPAAEQIISAIKVIL-GEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 314 g~~G---G~i---~~~~~~~~~l~----~~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
+.+| ||+ ++++++++.+. ..... .+ .+.+++.+.++..+|+.-. .+......++.+++++++.+.+.
T Consensus 254 ~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 331 (404)
T PTZ00376 254 GLYGERIGALHIVCANKEEAANVLSQLKLIIRP-MY-SSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLY 331 (404)
T ss_pred cccccccceEEEEeCCHHHHHHHHHHHHHHHhh-hc-CCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9779 998 57877655443 21111 12 1245566666666553100 00000123455678889999999
Q ss_pred HHHHhCCC----eeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHH
Q 046230 383 SELQKMGF----EVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKAL 457 (489)
Q Consensus 383 ~~L~~~g~----~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l 457 (489)
+.|++.++ .+..+.++.++++.+ ..+++++|.++ ||.+.|. + |++++ ..++++++.++
T Consensus 332 ~~L~~~~~~~~~~~~~p~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p~---------~--Ris~~-~~~~~~~~~~~ 394 (404)
T PTZ00376 332 DELKALGSPGDWEHIINQIGMFSFTGL-----TKEQVERLIEKYHIYLLDN---------G--RISVA-GLTSKNVDYVA 394 (404)
T ss_pred HHHHhcCCCCcccccccCceEEEecCC-----CHHHHHHHHHhCCEeecCC---------C--eEEEe-ccCHHhHHHHH
Confidence 99998753 344455565544433 25788889988 9998731 1 99995 38999999999
Q ss_pred HHHHHHHHH
Q 046230 458 EVISRVGDL 466 (489)
Q Consensus 458 ~~l~~~~~~ 466 (489)
++|++++..
T Consensus 395 ~~l~~~~~~ 403 (404)
T PTZ00376 395 EAIHDVVRN 403 (404)
T ss_pred HHHHHHHhc
Confidence 999988653
No 239
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=6.9e-22 Score=200.89 Aligned_cols=323 Identities=17% Similarity=0.153 Sum_probs=213.7
Q ss_pred CCccchHHHHHHHHHhCCCCCCcccCCCc--chhHHHHHHHHHHHhCC--CCEEEeCccH-HHHHHhHhhhc-----CC-
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSRVDGGT--LMVHNELEECVARFVGK--PAAIVFGMGY-VTNSAILPVLM-----RK- 184 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~--~~~i~~~sG~-~a~~~~~~al~-----~~- 184 (489)
.++.+.+++.+.+.++.....+ ...++. .....+..+.+++.++. ++.+++++|+ +++..++.++. .+
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~ 89 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNS-LHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGG 89 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCC
Confidence 3567888888888764322221 111221 12223333444445553 4667776655 55566666542 34
Q ss_pred CCEEEEcCCCchHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 185 GSLIISDSLNHNSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 185 g~~Vl~~~~~h~~~~~~---~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
++.|++....|+++... ++..|++++.++.+ |+++|++.+.. ++.++++..+.+++|.+
T Consensus 90 ~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-------------~t~lv~~~~~~n~tG~~ 156 (382)
T TIGR03403 90 KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE-------------KTALVSVMWANNETGMI 156 (382)
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc-------------CCeEEEEEcccCCCccc
Confidence 56889888888876554 34568888888764 67777777653 34567778889999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHH--HHHHhh
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELI--QYLKYT 333 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~--~~l~~~ 333 (489)
.|+++|.++|+++|+++++|++|+.|.+ ..++...++|+++.|++|++|++| |++..++... ..+...
T Consensus 157 ~~~~~I~~la~~~g~~~ivD~a~~~g~~---------~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~ 227 (382)
T TIGR03403 157 FPIKEIGEICKERGVLFHTDAVQAIGKI---------PVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGG 227 (382)
T ss_pred cCHHHHHHHHHHcCCEEEEechhhcCCC---------ccCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCC
Confidence 9999999999999999999999985532 123333456999999999999888 8887655431 001000
Q ss_pred --CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC--C-CCeEEEEeCC
Q 046230 334 --CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN--D-SPVMPIMLYN 407 (489)
Q Consensus 334 --~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~--~-~~~~~~~~~~ 407 (489)
.... ...+.|.+...++.++++.+.. ..+...+++++..+++++.|+++ ++.+.++. . .+++.+.+.
T Consensus 228 ~~~~~~-~~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (382)
T TIGR03403 228 EHMGGR-RSGTLNVPYIVAMGEAMRLANE-----YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK- 300 (382)
T ss_pred CCCCCc-ccCCcChHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC-
Confidence 0001 1123666677677778876631 34666788899999999999887 77776543 2 224444443
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCC------------c----CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPA------------T----PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~------------~----~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.....++...|.++||.+......+ . +...+.+|+++...+|++|||+++++|++++++++
T Consensus 301 ~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 301 GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3456778888888999998522111 0 01136799999999999999999999999988764
No 240
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=8.4e-22 Score=199.49 Aligned_cols=318 Identities=22% Similarity=0.296 Sum_probs=225.8
Q ss_pred CCCCCCccchHHHHHHHHHhCCCC--CCcccCCCcchhHHHHHHHHHHHhCCCC--EEEe-CccHHHHHHhHhhh---cC
Q 046230 112 GFAASDEYCTPRVIESLKKYSPST--CSSRVDGGTLMVHNELEECVARFVGKPA--AIVF-GMGYVTNSAILPVL---MR 183 (489)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~-~sG~~a~~~~~~al---~~ 183 (489)
|.+..++.+.+++.+.+.++-... +.+.......+...++++.+++++|.+. .+++ ++++.++..++.++ ..
T Consensus 7 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~ 86 (371)
T PF00266_consen 7 GTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK 86 (371)
T ss_dssp SS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT
T ss_pred CccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc
Confidence 333346788899998887642211 1111111135667889999999999764 5555 55566667777777 68
Q ss_pred CCCEEEEcCCCchHHHHHH----HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 184 KGSLIISDSLNHNSIVNGA----RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 184 ~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
+++.|++....|++....+ +..|+++..++.+ |++++++.|.. ++.+|++..+.+.+|
T Consensus 87 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~-------------~~~lv~~~~~~~~tG 153 (371)
T PF00266_consen 87 PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP-------------DTRLVSISHVENSTG 153 (371)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT-------------TESEEEEESBETTTT
T ss_pred cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc-------------ccceEEeeccccccc
Confidence 8999999999999876332 3568888776542 78888888864 455677778888899
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhh
Q 046230 255 ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYT 333 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~ 333 (489)
...|+++|.++|+++|+++++|.+|++|.. ..+++..++|++++|..|.+|++| |++..+++.++.++..
T Consensus 154 ~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~---------~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 154 VRNPIEEIAKLAHEYGALLVVDAAQSAGCV---------PIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPA 224 (371)
T ss_dssp BBSSHHHHHHHHHHTTSEEEEE-TTTTTTS---------S--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTS
T ss_pred EEeeeceehhhhhccCCceeEechhccccc---------cccccccccceeeecccccCCCCchhhheehhhhhhccccc
Confidence 999999999999999999999999997754 344555567999999999557778 9999999999988644
Q ss_pred CCCcc------------------c-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ceee
Q 046230 334 CPAHL------------------Y-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVL 393 (489)
Q Consensus 334 ~~~~~------------------~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~ 393 (489)
..++. | ..+.+.+...+..++++.+.. ...++..++..++.+++++.|++++ +.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~----~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE----IGIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc----cccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 33221 1 113566667777788887732 1456678889999999999999994 4554
Q ss_pred C----CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHHHHHH
Q 046230 394 G----DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKEDLIKA 456 (489)
Q Consensus 394 ~----~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~edid~~ 456 (489)
+ ...+.++.+.+ .......+.+.|.++||.+........| ...+.+|+++...+|++|||++
T Consensus 301 ~~~~~~~~~~i~~~~~-~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNL-PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSCGGBGTTEEEEEE-TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eecccccccceEEEee-cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 4 22356777766 4556788999999999999962222211 0137899999999999999975
No 241
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=6e-22 Score=192.70 Aligned_cols=322 Identities=18% Similarity=0.214 Sum_probs=234.7
Q ss_pred CccchHHHHHHHHHh-CCCCCCcccCCC--cchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhh--hc----CCC
Q 046230 117 DEYCTPRVIESLKKY-SPSTCSSRVDGG--TLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPV--LM----RKG 185 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~-~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~a--l~----~~g 185 (489)
.|++.+++...+... |..++ ...+| .....++.++++|+.+|.+ +.|+| +.||++|..+++. .. +++
T Consensus 14 ~~~v~~~m~~~~~~~fgNPsS--~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~ 91 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNPSS--LHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG 91 (386)
T ss_pred CHHHHHHHHHHHHhhcCCccc--hhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC
Confidence 588999999988874 44332 33334 3566788999999999974 56666 5567888666554 22 367
Q ss_pred CEEEEcCCCchHHHHHHHhc---CCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC
Q 046230 186 SLIISDSLNHNSIVNGARGS---GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257 (489)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~---g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~ 257 (489)
..|++..-.|.++...++.. |..+.+.+.+ |+++|+++|++ ++++|.+-.++|++|++.
T Consensus 92 ~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~-------------~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 92 KHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP-------------DTILVSIMHANNETGTIQ 158 (386)
T ss_pred CeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC-------------CceEEEEEecccCeeecc
Confidence 89999999999999888766 8888888776 89999999985 688999999999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHH-HHHHhh--
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELI-QYLKYT-- 333 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~-~~l~~~-- 333 (489)
|+++|.++|+++++++++|.+|++|-+ ..++....+|++.-|-+|..|+-| |++..++.+. +.+...
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gki---------pi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGg 229 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKI---------PIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGG 229 (386)
T ss_pred cHHHHHHHHHHcCCeEEEehhhhcCce---------eccccccCcceEEeehhhccCCCceEEEEECCCCccCceeccCc
Confidence 999999999999999999999997743 223322237999888889999988 8888765432 111110
Q ss_pred -CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCC--CCCeEEEEeCCC
Q 046230 334 -CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDN--DSPVMPIMLYNP 408 (489)
Q Consensus 334 -~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~--~~~~~~~~~~~~ 408 (489)
..+. -+.+.|.+..++.-+++++... +.+...+++....++|.+.|.+. ++.+.+.. +.|-.-.+....
T Consensus 230 QE~g~-RsGTenv~~Ivg~~~A~~~a~~-----~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g 303 (386)
T COG1104 230 QERGL-RSGTENVPGIVGFGKAAEIAVE-----ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG 303 (386)
T ss_pred CCCCC-CCCCccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC
Confidence 0111 1224666677777777776532 56778888999999999999976 44454442 233333333344
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcC----------------CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATP----------------LLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~----------------~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.....+...|-.+||.+....-++.+ .-.+.+||+++...|++|+|++++++.++++.++
T Consensus 304 v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr 379 (386)
T COG1104 304 VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLR 379 (386)
T ss_pred CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 56677777777789999863222211 1136899999999999999999999999998875
No 242
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-21 Score=196.98 Aligned_cols=283 Identities=18% Similarity=0.188 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC--------C
Q 046230 148 HNELEECVARFVGKP-AAIVFGMGYVTN-SAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN--------T 216 (489)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d 216 (489)
..+|++.+|++++.+ +.|++++|+... ..++.++..+| +.|+++.|+|+.+...++..|++++.++.. |
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 378999999999864 678888887655 77888888888 799999999998887778889999988752 2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCccccc
Q 046230 217 PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 217 ~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
++++++.+.. ++.+ +|++.++++++|.+.+.+++.++++. +++++|+||+|. .|..... ....
T Consensus 141 ~~~l~~~~~~-----------~~~~-lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~--~f~~~~~-~~~~ 205 (364)
T PRK04781 141 VPAIVAAALA-----------SNAK-LVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG--EFSDVPS-AVGL 205 (364)
T ss_pred HHHHHHHHhc-----------cCCe-EEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch--hhcCCcc-hHHH
Confidence 3444333222 1234 44445789999999998777777764 478999999998 6643221 1112
Q ss_pred cCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL 371 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~ 371 (489)
.+. .+.-|+++||||+||.+| ||+++++++++.+...... ++ .+.+.+.++.++|+.- ......+.+
T Consensus 206 ~~~--~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~--~~--~~~~~~~~a~~~l~~~----~~~~~~~~~ 275 (364)
T PRK04781 206 LAR--YDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAP--YP--VPTPCAALAEQALSAP----ALAVTARRV 275 (364)
T ss_pred Hhh--CCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCC--CC--CCHHHHHHHHHHHhcc----cHHHHHHHH
Confidence 222 222588999999999779 9999999999999876643 33 6666666666665420 011344556
Q ss_pred HHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec-CCCcCCCCCeEEEeecCCCC
Q 046230 372 ARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA-FPATPLLLARARICISASHT 449 (489)
Q Consensus 372 ~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t 449 (489)
+++.++.+.+.+.|+++ ++....+.+++++++.+. ...++.+.|.++||.+.+.. ++ ...+++||++. +
T Consensus 276 ~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~~~~~~~~l~~~gI~v~~~~~~~---~~~~~~Ris~~---~ 346 (364)
T PRK04781 276 AEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAAGVVVRDQRAAP---RLSDALRITLG---T 346 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEeeCCCCC---CCCCeEEEeCC---C
Confidence 67888889999999988 664234556777777664 35788899999999999743 22 23578999984 6
Q ss_pred HHHHHHHHHHHHHHH
Q 046230 450 KEDLIKALEVISRVG 464 (489)
Q Consensus 450 ~edid~~l~~l~~~~ 464 (489)
+++.++++++|+++.
T Consensus 347 ~~~~~~l~~al~~~~ 361 (364)
T PRK04781 347 PEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998754
No 243
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=196.04 Aligned_cols=310 Identities=18% Similarity=0.211 Sum_probs=213.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH-HH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN-SA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~-~~ 176 (489)
+...+||+++. ..++ .+|.+.+++.+.+.+.... .+ ...| ..++++.+|++++. ++.|++++|++.. ..
T Consensus 17 ~~~~i~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~--~Y-~~~g----~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 17 GNYRIWLDKNE-NPFD-LPEELKEEIFEELKRVPFN--RY-PHIT----SDPLREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred CCceEEecCCC-CCCC-CCHHHHHHHHHHhhcCccc--cC-CCCC----HHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 45678887553 1222 2367888888877542211 11 1113 37899999999985 4788888888776 55
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++ +|+.|+++.|+|..+...++..|++++.++.+ |++++++.+. ..++++ +.+.++
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-------------~~~~v~-~~~P~N 151 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAK-------------NASAVF-ICSPNN 151 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhcc-------------CCCEEE-EeCCCC
Confidence 55544 68999999999998877788889999888754 4556655321 234444 456799
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHH
Q 046230 252 MEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQ 328 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~ 328 (489)
++|.+.+.++|.++++ +++++|+||+|. .|... ......+. .+.-|+++||||.||.+| ||+++++++++
T Consensus 152 PtG~~~~~~~l~~i~~-~~~~ii~De~y~--~~~~~--~~~~~~~~--~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~ 224 (337)
T PRK03967 152 PTGNLQPEEEILKVLE-TGKPVVLDEAYA--EFSGK--SLIGLIDE--YPNLILLRTFSKAFGLAGIRAGYAIANEEIID 224 (337)
T ss_pred CCCCCCCHHHHHHHHh-cCCEEEEECchh--hhccc--chHHHHhh--CCCEEEEecchHhhcchhhhheeeecCHHHHH
Confidence 9999999999999995 799999999998 55421 11111121 122588899999999779 99999999999
Q ss_pred HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCC
Q 046230 329 YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP 408 (489)
Q Consensus 329 ~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~ 408 (489)
.+...... ++ .+.+.+.++.++|+.. ++..+.++.+.++.+.+.+.|.+.. .+.+++++++.+
T Consensus 225 ~~~~~~~~--~~--~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~--- 287 (337)
T PRK03967 225 ALYRIKPP--FS--LNILTMKIVRLALDHY------DLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKL--- 287 (337)
T ss_pred HHHhhcCC--CC--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhH---
Confidence 88876543 23 5677777777666421 1344555666667777888887642 234566655543
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.+.|.++||.+.+.. +...+++||++. +.++.++++++|+++.+..+
T Consensus 288 ----~~~~~l~~~gi~v~~~~----~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 288 ----DAYDYLLENGIVVRKLS----GRLEGHIRVTVG---KREENDEFIKALKEIKEGYG 336 (337)
T ss_pred ----HHHHHHHHCCEEEEeCC----CCCCCeEEEecC---CHHHHHHHHHHHHHHHHhcC
Confidence 27888999999998532 123568999984 67888899999988776554
No 244
>PLN02397 aspartate transaminase
Probab=99.91 E-value=7.9e-22 Score=202.47 Aligned_cols=330 Identities=14% Similarity=0.103 Sum_probs=213.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhC-CCCCCcccCCCcchhHHHHHHHHHHHhCCC-------CEE-----
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYS-PSTCSSRVDGGTLMVHNELEECVARFVGKP-------AAI----- 165 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~i----- 165 (489)
+...||++...+-... .+|.+.+++.+++.... .+. ...|+......+|++.+++++... +.+
T Consensus 47 ~~~~l~l~~g~~p~~~-~~p~~~~~~~~a~~~~~~~~~---~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i 122 (423)
T PLN02397 47 SPVKLNLGVGAYRTEE-GKPVVLNVVRKAEQRLLAGSR---NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQC 122 (423)
T ss_pred CcceEecccceeeCCC-CCcccchHHHHHHHHhhccCC---CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeec
Confidence 3456888744433322 23566777777754421 111 112233334488999999986421 222
Q ss_pred EeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHHHHhcCCCCCCCC
Q 046230 166 VFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH----N---TPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 166 ~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
+.++|+.+....+.++..+||.|++++|+|..+...++..|++++.++. + |++.+++.++.. .
T Consensus 123 ~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~----------~ 192 (423)
T PLN02397 123 LSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA----------P 192 (423)
T ss_pred ccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC----------C
Confidence 2244444444444555569999999999999999999999999988864 1 677777766542 1
Q ss_pred CccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC--c--cccccCCCCCCccEEEccccc
Q 046230 239 WKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR--G--VCELLEVDTADVDIMMGTFTK 311 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~--~--~~~~~~v~p~~~Di~~~t~sK 311 (489)
.++.++++.+.+||+|.+.+ +++|+++|++||+++|+||+|. .|...+. . ....+.-. .+.-|+++||||
T Consensus 193 ~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~--~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK 269 (423)
T PLN02397 193 DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ--GFASGDLDADAQSVRMFVED-GHEILVAQSYAK 269 (423)
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC--CccCCchhhhhHHHHHHHhc-CCcEEEEEECcc
Confidence 24567888889999998866 7788999999999999999999 6654331 1 11111111 122488999999
Q ss_pred ccCCcc---eEEE---eCHHHHHH----HHhhCCCcccccCCCHHHHHHHHHHHHHH--HccCCCchHHHHHHHHHHHHH
Q 046230 312 SFGSCG---GYIA---GSKELIQY----LKYTCPAHLYATSISPPAAEQIISAIKVI--LGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 312 ~~g~~G---G~i~---~~~~~~~~----l~~~~~~~~~~~~~~p~~~aa~~a~L~~i--~~~~~~~~~~~~~~~~~~~~~ 379 (489)
+++.+| ||++ +++++++. +.........+ .+...+.++.+.|+-- .. ....+.++.+++++++.+
T Consensus 270 ~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~rr~ 346 (423)
T PLN02397 270 NMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSN--PPIHGASIVATILGDPELFS-EWTKELKGMADRIISMRQ 346 (423)
T ss_pred cCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC--CcHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999889 9984 46665543 33322221112 3444555555444310 00 000124567788999999
Q ss_pred HHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 380 FFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 380 ~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
.+.+.|+++| +.+..+.+++++++.+. .++++.|+++ ||.+. + .+ |++++ ..++++++
T Consensus 347 ~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~-------~--~~--Ri~~~-~~~~~~i~ 409 (423)
T PLN02397 347 KLYDALEARGSPGDWSHITKQIGMFSFTGLN-----KEQVDRMTKEYHIYMT-------R--DG--RISMA-GLSSKNVP 409 (423)
T ss_pred HHHHHHHhcCCCCCCCcccCCceEEEecCCC-----HHHHHHHHHhCCEEEC-------C--CC--eEEEe-eCCHHHHH
Confidence 9999999987 66656667766555442 4588888766 99986 1 12 99983 48999999
Q ss_pred HHHHHHHHHHH
Q 046230 455 KALEVISRVGD 465 (489)
Q Consensus 455 ~~l~~l~~~~~ 465 (489)
+++++|.++++
T Consensus 410 ~~~~~i~~~~~ 420 (423)
T PLN02397 410 YLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHh
Confidence 99999999874
No 245
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=197.47 Aligned_cols=277 Identities=17% Similarity=0.225 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHhCC-CCEEEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHH
Q 046230 148 HNELEECVARFVGK-PAAIVFGMGYVTN-SAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSH 219 (489)
Q Consensus 148 ~~~l~~~la~~~g~-~~~i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~ 219 (489)
..+|++.+|+++|. ++.|++++|++.. ..++.++.++| +.|++..|+|..+...++..|++++.++.+ |++.
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~ 141 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDY 141 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHH
Confidence 37899999999986 4778888888665 77788888888 899999999999888888899999988764 3444
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc-CcEEEEEcccccccccCCCCccccccCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY-KAYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~-~~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
++. + . +.++ |++.++++++|.+.+.+++.++++.. +++||+||+|. .|.... ...+.....
T Consensus 142 l~~-~-~------------~~~l-i~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~--~~~~~~-s~~~~~~~~ 203 (354)
T PRK04635 142 IEQ-L-D------------GAKL-VFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI--EFCPEY-SVADLLASY 203 (354)
T ss_pred HHh-c-c------------CCCE-EEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH--hhccCc-chHHHHhhC
Confidence 431 1 1 2344 44558899999999999999888774 69999999998 554321 111221111
Q ss_pred CCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 299 TADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
.. -|+++||||++|.+| ||+++++++++.+...... ++ .+.+.+.++.++|+.- +....++.+++++
T Consensus 204 -~~-~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~--~~--~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~ 273 (354)
T PRK04635 204 -PN-LVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAP--YP--VPLPVSEIATQALSEA----GLARMKFQVLDLN 273 (354)
T ss_pred -CC-EEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCC--CC--CCHHHHHHHHHHHhcc----cHHHHHHHHHHHH
Confidence 12 478899999999778 9999999999988754432 22 5666666666665421 1113455667788
Q ss_pred HHHHHHHHHHHhCC-CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 376 ENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
++.+.+.+.|++++ +.+.++ .+.++++.+. ...++.+.|.++||.+..... +...+++||++ .+++|++
T Consensus 274 ~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~---~~~~~~~~l~~~gv~v~~~~~---~~~~~~lRis~---~~~e~~~ 343 (354)
T PRK04635 274 AQGARLQAALSMYGGAKVLEG-NGNYVLAKFD---DVDAVFKALWDAGIVARAYKD---PRLANCIRFSF---SNRAETD 343 (354)
T ss_pred HHHHHHHHHHHhCCCceECCC-CCcEEEEECC---CHHHHHHHHHHCCEEEEECCC---CCCCCeEEEEe---CCHHHHH
Confidence 88899999999985 666554 4555555543 356788899999999985322 22357899998 3799999
Q ss_pred HHHHHHHH
Q 046230 455 KALEVISR 462 (489)
Q Consensus 455 ~~l~~l~~ 462 (489)
+++++|++
T Consensus 344 ~l~~al~~ 351 (354)
T PRK04635 344 KLIGLIRN 351 (354)
T ss_pred HHHHHHHH
Confidence 99999865
No 246
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=4.1e-22 Score=201.91 Aligned_cols=211 Identities=19% Similarity=0.247 Sum_probs=171.1
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.+.+++++||++++..++.++.++||.|+++.+.|++.... +...|+.+..++.+|+++++
T Consensus 59 p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~ 138 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVK 138 (391)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 44689999999999999999999999999888888899999999999988765433 34568888889888999988
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|++|++.+++|.+.++++|.++|+++|+++|+|++|+.+.+++ . .+ ..
T Consensus 139 ~~i~~-------------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---~----~~---~g 195 (391)
T TIGR01328 139 AHIKD-------------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---P----VA---LG 195 (391)
T ss_pred Hhhcc-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---c----hh---cC
Confidence 87754 34578889999999999999999999999999999999998554322 1 11 23
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
.|+++.|++|.+|++| |++++++++++.++.......++..++|..++.++..|+.+ ..++++..++
T Consensus 196 ~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---------~~r~~~~~~n 266 (391)
T TIGR01328 196 VDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---------NIRMKRHSEN 266 (391)
T ss_pred CCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---------HHHHHHHHHH
Confidence 4899999999998654 88999999998887543322334568888888888877644 5678888999
Q ss_pred HHHHHHHHHhC
Q 046230 378 SNFFRSELQKM 388 (489)
Q Consensus 378 ~~~l~~~L~~~ 388 (489)
...+.+.|++.
T Consensus 267 a~~la~~L~~~ 277 (391)
T TIGR01328 267 AMKVAEYLKSH 277 (391)
T ss_pred HHHHHHHHHhC
Confidence 99999999876
No 247
>PRK14012 cysteine desulfurase; Provisional
Probab=99.91 E-value=5.9e-22 Score=202.81 Aligned_cols=322 Identities=16% Similarity=0.207 Sum_probs=209.1
Q ss_pred CCccchHHHHHHHHH---hCCCCCCc-ccCCCcchhHHHHHHHHHHHhCCC-C-EEEeCccHHHHHHhHhhh----cCCC
Q 046230 116 SDEYCTPRVIESLKK---YSPSTCSS-RVDGGTLMVHNELEECVARFVGKP-A-AIVFGMGYVTNSAILPVL----MRKG 185 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~---~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~-~-~i~~~sG~~a~~~~~~al----~~~g 185 (489)
-++.+.+++.+.+.. ++...... .......+...++++.+|+++|.+ + .++.++|++++..++.++ .++|
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~g 94 (404)
T PRK14012 15 VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKG 94 (404)
T ss_pred CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCC
Confidence 357788888887752 22211100 000011245678899999999975 3 444566677776555555 3789
Q ss_pred CEEEEcCCCchHHHHHHH---hcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC
Q 046230 186 SLIISDSLNHNSIVNGAR---GSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257 (489)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~---~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~ 257 (489)
+.|+++...|+++...++ ..|++++.++.+ |+++|++++.. ++.+|++..+++++|.+.
T Consensus 95 d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~-------------~t~lv~~~~~~n~tG~~~ 161 (404)
T PRK14012 95 KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD-------------DTILVSIMHVNNEIGVIQ 161 (404)
T ss_pred CEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC-------------CCEEEEEECcCCCccchh
Confidence 999999999988765543 358888877654 78888887754 345777888999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCC
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~ 336 (489)
|+++|.++|+++|+++|+|++|++|... .++...++|+++.|++|.+|+.| |+++.+++....+.....+
T Consensus 162 ~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g 232 (404)
T PRK14012 162 DIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHG 232 (404)
T ss_pred hHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecC
Confidence 9999999999999999999999966431 22222345999889999888766 7877765533222211111
Q ss_pred ------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC--CC-CeEEEEeC
Q 046230 337 ------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN--DS-PVMPIMLY 406 (489)
Q Consensus 337 ------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~--~~-~~~~~~~~ 406 (489)
+..+ +.+.....+..++++.+.. ..++..++.+++.+++.+.|+++ ++.+.+.. .. ....+.+.
T Consensus 233 ~~~~~~~~~g-t~~~~~~~~l~~al~~~~~-----~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~ 306 (404)
T PRK14012 233 GGHERGMRSG-TLPTHQIVGMGEAARIAKE-----EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFN 306 (404)
T ss_pred CCccCCccCC-CcCHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEe
Confidence 1111 2344445555567766531 34557788889999999999876 45544321 22 22233332
Q ss_pred CCCcHHHHHHHHhhCCceEEe--ecCCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 407 NPAKIPAFSRECLRQNVAVVT--VAFPAT--------------PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~--~~~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.. ...++...|. ++.+.. ...+.. ....+.+|+++...+|++|+|+++++|+++++.++
T Consensus 307 ~~-~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 307 YV-EGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred Cc-CHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22 2345666664 444433 111110 01247899999999999999999999999988764
No 248
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=7.4e-22 Score=200.83 Aligned_cols=285 Identities=16% Similarity=0.203 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.++++++++|++++..++.++.++||.|+++.+.|+++... ++..|++++.++.+|+++++
T Consensus 64 p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 143 (400)
T PRK06234 64 PTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVR 143 (400)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHH
Confidence 44589999999999999999999999999888888899999999999999876543 46689999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
+.+.. ++.+|+++++.|++|.+.++++|.++|+++ |+++|+||+|+.+.++. ..+
T Consensus 144 ~~i~~-------------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-------~l~--- 200 (400)
T PRK06234 144 NALKA-------------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-------PLQ--- 200 (400)
T ss_pred HHhcc-------------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-------chh---
Confidence 88864 345788899999999999999999999997 99999999998553321 111
Q ss_pred CCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
.+.||++.|++|.++++| |++++++++++.++.......++..++|..++.++..|+.+ +.++++..
T Consensus 201 ~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl---------~~r~~~~~ 271 (400)
T PRK06234 201 LGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL---------QIRMEKHC 271 (400)
T ss_pred hCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH---------HHHHHHHH
Confidence 134899999999998655 99999999988886543222345678999998888887744 66778888
Q ss_pred HHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEee------cC
Q 046230 376 ENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTV------AF 430 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~------~~ 430 (489)
++...+.+.|++.. +. | ++ ...+.++.+.+... ....+|.+.|.--++.+.-. ..
T Consensus 272 ~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~ 351 (400)
T PRK06234 272 KNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQH 351 (400)
T ss_pred HHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecC
Confidence 89999999998752 10 1 11 11355677776432 23445666665444333221 11
Q ss_pred CCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 431 PAT--------------PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 431 p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
|.. ....+.+||++..- |.+.+++.|.++++.
T Consensus 352 p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE----~~~dl~~dl~~al~~ 397 (400)
T PRK06234 352 PASMTHSPYTAEERKEAGISDGLVRLSVGLE----DVDDIIADLKQALDL 397 (400)
T ss_pred CccCCCCCCCHHHHHhcCCCCCeEEEEeCCC----CHHHHHHHHHHHHHH
Confidence 111 11246899999754 455555555555543
No 249
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.91 E-value=1e-21 Score=196.84 Aligned_cols=277 Identities=19% Similarity=0.195 Sum_probs=195.1
Q ss_pred CcchhHHHHHHHHHHHhCCC----CEEEeCccHHHHHHhHhhhcC------------C--CCEEEEcCCCchHHHHHHHh
Q 046230 143 GTLMVHNELEECVARFVGKP----AAIVFGMGYVTNSAILPVLMR------------K--GSLIISDSLNHNSIVNGARG 204 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~~~al~~------------~--g~~Vl~~~~~h~~~~~~~~~ 204 (489)
+..++.+++.+.+++++|.+ ..+++++|++++..++.++.. + +.+|+++.+.|.++...+..
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 44555566666677777864 566678888888666666532 2 34899999999999888888
Q ss_pred cCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc
Q 046230 205 SGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 205 ~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~ 279 (489)
.|++++.++.+ |+++|++.+.+...++ .++.++++....+++|.+.++++|.++|+++|+++++|++|
T Consensus 115 ~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~-------~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~ 187 (345)
T cd06450 115 LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEG-------LNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAY 187 (345)
T ss_pred HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCC-------CCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechh
Confidence 89888888643 7899999987643332 13345555556777999999999999999999999999999
Q ss_pred ccccccCCC-CccccccCCCCCCccEEEcccccccCCc-c-eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 280 SIGAVGKTG-RGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 280 s~g~~g~~G-~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
+.+.+.... ... ..++ .++|.+..|++|+++++ | |++..+ ..+..++++
T Consensus 188 ~~~~~~~~~~~~~--~~~~--~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------~~~~~~~l~ 239 (345)
T cd06450 188 GGFLLPFPEPRHL--DFGI--ERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLR 239 (345)
T ss_pred hHHHhhChhhHHH--hcCc--cccCEEEEchhHhhCCCcchHHHHHH------------------------HHHHHHHHH
Confidence 955432111 111 1111 34688888999988543 3 555333 333334444
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCC----CcHHHHHHHHhhCCceEEe-ecC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP----AKIPAFSRECLRQNVAVVT-VAF 430 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~v~~-~~~ 430 (489)
.+. ....++.+++..++.+++.+.|+++ ++.+..+..++++.+.+... ....++.++|.++|+.+.+ ..+
T Consensus 240 ~l~----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 315 (345)
T cd06450 240 RFG----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTL 315 (345)
T ss_pred HHh----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEE
Confidence 441 1256788899999999999999988 67776655677777766542 3456899999999665553 222
Q ss_pred CCcCCCCCeEEEeecCCC-CHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASH-TKEDLIKALEVISR 462 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~-t~edid~~l~~l~~ 462 (489)
+ ...++|++++..+ |++|+|+++++|++
T Consensus 316 ~----~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 316 G----GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred C----CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1 4578999998765 99999999999875
No 250
>PLN02651 cysteine desulfurase
Probab=99.90 E-value=9.3e-22 Score=198.58 Aligned_cols=311 Identities=15% Similarity=0.176 Sum_probs=213.7
Q ss_pred CCCCccchHHHHHHHHH-hCCCCC-CcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhh----hcCCC
Q 046230 114 AASDEYCTPRVIESLKK-YSPSTC-SSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPV----LMRKG 185 (489)
Q Consensus 114 ~~~~~~v~~a~~~~l~~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~a----l~~~g 185 (489)
+.-++.+.+++.+.+.. ++.... .........+..+++++.++++++.+ +.+++ ++|++++..++.+ +.++|
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g 88 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKK 88 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCC
Confidence 33467788888887755 222111 01000112455778999999999964 55666 4556665444433 34788
Q ss_pred CEEEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC
Q 046230 186 SLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257 (489)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~ 257 (489)
+.|++....|+++...+ ...|++++.++.+ |++++++.+++ ++.++++..+.+++|.+.
T Consensus 89 ~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~t~lv~v~~~~n~tG~~~ 155 (364)
T PLN02651 89 KHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP-------------DTALVSVMAVNNEIGVIQ 155 (364)
T ss_pred CEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CcEEEEEECCCCCceecc
Confidence 99999999998865543 3458888777653 67888887753 355777888889999999
Q ss_pred ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCC
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPA 336 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~ 336 (489)
|+++|.++|+++|+++++|.+|++|.+ .++++..++|+++.|.+|++|+.| |++..+++..+.+.....+
T Consensus 156 ~l~~I~~~~~~~g~~~~vD~a~~~g~~---------~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g 226 (364)
T PLN02651 156 PVEEIGELCREKKVLFHTDAAQAVGKI---------PVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSG 226 (364)
T ss_pred cHHHHHHHHHHcCCEEEEEcchhhCCc---------ccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccC
Confidence 999999999999999999999996643 233444456999999999877777 8888877655444322111
Q ss_pred c-----ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCC----C-CCeEEEE
Q 046230 337 H-----LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-M-GFEVLGDN----D-SPVMPIM 404 (489)
Q Consensus 337 ~-----~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~----~-~~~~~~~ 404 (489)
. ....+.|...+.++.++|+.+.. ..++..++.++..+++++.|++ + |+.++++. . ..++.+.
T Consensus 227 ~~~~~~~~~GT~~~~~~~~l~~al~~~~~-----~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~ 301 (364)
T PLN02651 227 GGQERGRRSGTENTPLVVGLGAACELAMK-----EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLS 301 (364)
T ss_pred CCccCCccCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEE
Confidence 0 01224667778888899998853 3577788999999999999986 3 88887641 1 2366655
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCcC----------C------CCCeEEEeecCCCCHHHHH
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATP----------L------LLARARICISASHTKEDLI 454 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~----------~------~~~~iRi~~~~~~t~edid 454 (489)
+. .....++.+.|.+ |.+......+.+ . ..+.+|++++..+|++|||
T Consensus 302 ~~-~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 302 FA-YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred eC-CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 54 4456788888865 666542221111 0 2368999999999999985
No 251
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=198.58 Aligned_cols=285 Identities=14% Similarity=0.120 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHhCC-------CCEE--EeCccHHHH-HHhHhhh--cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-
Q 046230 148 HNELEECVARFVGK-------PAAI--VFGMGYVTN-SAILPVL--MRKGSLIISDSLNHNSIVNGARGSGATIRVFQH- 214 (489)
Q Consensus 148 ~~~l~~~la~~~g~-------~~~i--~~~sG~~a~-~~~~~al--~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~- 214 (489)
..+|++.+++++.. ++.+ ++|+|++.. ..++.++ +++||.|++++|+|..+...++..|++++.++.
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~ 150 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYY 150 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEecc
Confidence 37888888888631 3444 778887665 5565544 489999999999999999999999999998874
Q ss_pred --C----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccc
Q 046230 215 --N----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 215 --~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
+ |++++++.++.. +.++.++++.+.+|++|.+.+ +++|+++|++||+++|+||+|. .+.
T Consensus 151 ~~~~~~~d~~~l~~~~~~~----------~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~l~ 218 (396)
T PRK09257 151 DAATKGLDFDAMLADLSQA----------PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ--GFG 218 (396)
T ss_pred ccccCccCHHHHHHHHHhC----------CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc--ccc
Confidence 1 677888877642 123567888999999998866 7899999999999999999998 665
Q ss_pred CC-CCccccccCCC-CCCccEEEcccccccCCcc---eEEEe---CHHH----HHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 286 KT-GRGVCELLEVD-TADVDIMMGTFTKSFGSCG---GYIAG---SKEL----IQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 286 ~~-G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G---G~i~~---~~~~----~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
.. +........+. ..+..|+++||||.|+++| ||+++ +++. ++.+...... .+. +.+++.+.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~q~~~~~ 296 (396)
T PRK09257 219 DGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRT-NYS-NPPAHGAAIVAT 296 (396)
T ss_pred cchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhh-hcC-CCcHHHHHHHHH
Confidence 43 11111111111 1122588999999999888 99873 4443 3333322211 111 135555555544
Q ss_pred HHHHHH-ccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHH-hhCCceEEe
Q 046230 354 AIKVIL-GEDGSSRGAQKLARIRENSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSREC-LRQNVAVVT 427 (489)
Q Consensus 354 ~L~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~ 427 (489)
.|+.-. .+....+.++.+++++++.+.+.+.|++.+ +.+..+.++..+|+.+ .. ++...+ .++||.+.+
T Consensus 297 ~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l----~~-~~~~~l~~~~~V~~~p 371 (396)
T PRK09257 297 ILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGL----TP-EQVDRLREEFGVYAVG 371 (396)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCC----CH-HHHHHHHHcCCEEEcC
Confidence 443100 000011345678888999999999999874 4455566676555543 22 344445 555998872
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
. + ||+++ ..++++|++++++|.++
T Consensus 372 -------~--~--ri~~~-~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 372 -------S--G--RINVA-GLNESNIDYVAEAIAAV 395 (396)
T ss_pred -------C--C--eEEEe-eCCHHHHHHHHHHHHhh
Confidence 2 2 99985 48999999999999875
No 252
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.3e-20 Score=178.50 Aligned_cols=336 Identities=15% Similarity=0.128 Sum_probs=232.8
Q ss_pred cceeEecccccccCCCCC--CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--------CCEEEeC
Q 046230 99 VNRCLNLGSYNYLGFAAS--DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--------PAAIVFG 168 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~ 168 (489)
+|.+|-++.+++--++.- .++..+|+.++++..-.. .|+.+......++++|+++.. +++++.+
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N------~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259|consen 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN------GYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred CceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC------CcCCccccHHHHHHHHHHhhcCCCCccCcCceEEec
Confidence 458888877655444432 467888888888762111 112233347788999999654 2444445
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
.+++|...++.++.+||..|++++|.|+-+..-+...|.+++.|+.- |++.+|.++++ ++
T Consensus 134 GC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE-------------NT 200 (447)
T KOG0259|consen 134 GCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE-------------NT 200 (447)
T ss_pred cchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc-------------Ce
Confidence 55677799999999999999999999999988888899999988642 89999998886 45
Q ss_pred EEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc
Q 046230 242 IMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G 317 (489)
+++++-+..++.|.+. .|++|.++|+|+++.+|.||+|..-.||..--- ......+.| .|.+|+.||.+=.+|
T Consensus 201 ~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP---VitlggisKrW~VPG 277 (447)
T KOG0259|consen 201 VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP---VITLGGISKRWIVPG 277 (447)
T ss_pred eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc---eEeecccccccccCC
Confidence 5666666678888773 499999999999999999999984445433222 333444556 799999999998779
Q ss_pred ---eEEEeCH--------HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 318 ---GYIAGSK--------ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 318 ---G~i~~~~--------~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
||++..+ .+++.+.....- ....+.++++|.-.-|+.- ..+..+..+.-++.+.+..-++|+
T Consensus 278 WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~---~~~p~TiiQ~AlP~IL~kT----p~efF~k~~~~lk~na~l~y~~Lk 350 (447)
T KOG0259|consen 278 WRLGWIALHDPRGVFRDTKVVQGIKNFLDI---IPGPATIIQGALPDILEKT----PEEFFDKKLSFLKSNADLCYSRLK 350 (447)
T ss_pred ceeeeEEEecccccccchHHHHHHHHHHhc---cCCccHhHHHHhHHHHHhC----hHHHHHHHHHHHHhhHHHHHHHHh
Confidence 9997532 334555444331 1113333444444433321 223467788888999999999999
Q ss_pred hC-CCee-eCCCCCCeEEEEeC-----CCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHH
Q 046230 387 KM-GFEV-LGDNDSPVMPIMLY-----NPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 387 ~~-g~~v-~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
++ ++.. ..+.+...+++-+. +..+..+|+++|.++ .+++.|..-. ..++|+|+++ ....+.++++++
T Consensus 351 ~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af---~~~nw~Ri~i--~~~~~~leea~~ 425 (447)
T KOG0259|consen 351 DIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAF---GLKNWLRIVI--TVEEEMLEEAFS 425 (447)
T ss_pred cCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccc---cCCCeEEEEE--ccChHHHHHHHH
Confidence 98 6653 33444444443332 233455788888766 8888862211 2358999999 688999999999
Q ss_pred HHHHHHHHhC
Q 046230 459 VISRVGDLVG 468 (489)
Q Consensus 459 ~l~~~~~~~~ 468 (489)
+|+++.++..
T Consensus 426 Rik~Fc~RH~ 435 (447)
T KOG0259|consen 426 RIKEFCDRHS 435 (447)
T ss_pred HHHHHHHhhh
Confidence 9999987754
No 253
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.90 E-value=4.7e-21 Score=197.04 Aligned_cols=291 Identities=13% Similarity=0.100 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHh----C---CCCEEEeCccHHHH-HHhHhhhcC-----CCCEEEE-cCCCchHHHHHHHhcC------C
Q 046230 148 HNELEECVARFV----G---KPAAIVFGMGYVTN-SAILPVLMR-----KGSLIIS-DSLNHNSIVNGARGSG------A 207 (489)
Q Consensus 148 ~~~l~~~la~~~----g---~~~~i~~~sG~~a~-~~~~~al~~-----~g~~Vl~-~~~~h~~~~~~~~~~g------~ 207 (489)
..+|++.+|+++ | .++.|++++|+... ..++.++++ +|+.|++ ..|+|+.+...+...+ .
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~ 155 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRP 155 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccc
Confidence 367888888876 3 24678899888776 677777774 5889999 7999988766443222 1
Q ss_pred eEEEecC------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcc
Q 046230 208 TIRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 208 ~~~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa 278 (489)
.+..++. -|+++|+ + . .++.++++.+.+|++|.+.+ +++|+++|++|+++||+||+
T Consensus 156 ~~~~~~~~~~~~~~d~~~l~--~-~------------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~ 220 (416)
T PRK09440 156 NIELLPEGQFKYHVDFEHLH--I-D------------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNA 220 (416)
T ss_pred ccccccccccccCCCHHHcc--c-C------------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCC
Confidence 2222221 1445554 1 1 13345555667899999977 78899999999999999999
Q ss_pred cccccccCCCCccccccCCCC--CCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 279 HSIGAVGKTGRGVCELLEVDT--ADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 279 ~s~g~~g~~G~~~~~~~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
|. .+-.... +.+..+ .+.-|+++||||. +.+| ||+++++++++.+......... +.+.+.+.++.+
T Consensus 221 Y~--~~~~~~~----~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~~~~--~~s~~~q~~~~~ 291 (416)
T PRK09440 221 YG--PPFPGII----FSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGIISL--APGRLGPAIAAE 291 (416)
T ss_pred cc--ccCCCcc----hhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHHhcc--CCCcHHHHHHHH
Confidence 97 3211110 111111 2235888999996 7778 9999999999988776543322 367777777777
Q ss_pred HHHHHHccCCCchH-HHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEe
Q 046230 354 AIKVILGEDGSSRG-AQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVT 427 (489)
Q Consensus 354 ~L~~i~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~ 427 (489)
.|+-- ...... +..+..++++.+.+++.|++. ++.+..+.+++++++.+.. .....++.+.|.++||.+.+
T Consensus 292 ~l~~~---~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~p 368 (416)
T PRK09440 292 MIESG---DLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVP 368 (416)
T ss_pred Hhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEec
Confidence 66410 000011 124555667777777777653 4555566678888887765 34567899999999999998
Q ss_pred ecCC--CcC----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 428 VAFP--ATP----LLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 428 ~~~p--~~~----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.... ... .+.+++||+++ .+++++++++++|.++++..
T Consensus 369 g~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 369 GHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred hHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 4321 111 11368999995 47999999999999988764
No 254
>PRK08637 hypothetical protein; Provisional
Probab=99.90 E-value=1.4e-20 Score=191.47 Aligned_cols=321 Identities=14% Similarity=0.129 Sum_probs=213.1
Q ss_pred ccchHHHHHHHHHhC-CCCCCcccCCCcchhHHHHHHHHHHHhCC-------C--CEEEeCccHHHH-HHhHhhhcCCCC
Q 046230 118 EYCTPRVIESLKKYS-PSTCSSRVDGGTLMVHNELEECVARFVGK-------P--AAIVFGMGYVTN-SAILPVLMRKGS 186 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~--~~i~~~sG~~a~-~~~~~al~~~g~ 186 (489)
|.+.+++.+.+.+.. ....++....|. .+|++.+++++.. + +.|++++|+... ..++.+++++||
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd 94 (388)
T PRK08637 19 PMYLSSLQDLLNDLTPDEIFPYAPPQGI----PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGD 94 (388)
T ss_pred cchHHHHHHHHHhhccccccCCCCCCCC----HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCC
Confidence 456777777766532 122222223344 6777888776521 1 457788887665 778888899999
Q ss_pred EEEEcCCCchHHHHHH-HhcCCeEEEecC--C----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-
Q 046230 187 LIISDSLNHNSIVNGA-RGSGATIRVFQH--N----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK- 258 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~-~~~g~~~~~~~~--~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~- 258 (489)
.|+++.|+|+.+...+ ...|++++.++. + |++++++.++... +..+.++++.+.+||+|...+
T Consensus 95 ~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~---------~~~~~~~~~~~P~NPTG~~~s~ 165 (388)
T PRK08637 95 TVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAY---------NKGKVIVILNFPNNPTGYTPTE 165 (388)
T ss_pred EEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhc---------cCCCEEEEEeCCCCCCCCCCCH
Confidence 9999999999998765 467999988775 2 6788888776210 124556777878999998866
Q ss_pred --hHHHHHHHHH-----cCcEEEEEcccccccccCCCCcccc----ccCCCCCCc-cEEEcccccccCCcc---eEEEe-
Q 046230 259 --FPEIIAICKK-----YKAYIYLDEAHSIGAVGKTGRGVCE----LLEVDTADV-DIMMGTFTKSFGSCG---GYIAG- 322 (489)
Q Consensus 259 --l~~i~~l~~~-----~~~~li~DEa~s~g~~g~~G~~~~~----~~~v~p~~~-Di~~~t~sK~~g~~G---G~i~~- 322 (489)
+++|+++|++ |+++||+||+|. .+-..+..... ..+.. ..+ -+.++||||.++.+| ||++.
T Consensus 166 ~~~~~l~~~~~~~~~~~~~~~iI~De~Y~--~l~~~~~~~~~~~~~~~~~~-~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 166 KEATAIVEAIKELADAGTKVVAVVDDAYF--GLFYEDSYKESLFAALANLH-SNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEecccch--hcccCCccchhhHHHhhccc-ccceEEEeccccccCCCcccceEEEEEc
Confidence 6777777765 999999999998 66444432111 11221 122 234569999999889 99984
Q ss_pred -----CHHHHHHHHhhCC---CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CC
Q 046230 323 -----SKELIQYLKYTCP---AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GF 390 (489)
Q Consensus 323 -----~~~~~~~l~~~~~---~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~ 390 (489)
++++++.+..... .... .+.|.+.++++.+.|+-- ....+..+.+..++++.+.+.+.|++. ++
T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 243 TKAGSSQTVKEALEKKVKGLIRSNI-SNGPHPSQSAVLRALNSP---EFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred cccCCcHHHHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 3677777753210 0011 136667777777766310 000122344556777777788888765 45
Q ss_pred eeeCCCCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 391 EVLGDNDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 391 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+..+.++.++++.+. .....+|.+.|+ ++||.+.+ .+++++||+++ ..+.++++.++++|.++++.+
T Consensus 319 ~~~~~~~g~~~~~~l~-~~~~~~l~~~l~~~~gv~~~~-------~~~~~iRi~~~-~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 319 QAYPFNSGYFMCLKLK-GVDAEELRVHLLEKYGIGTIA-------LNETDLRIAFS-CVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ccccccceEEEEecCC-hHHHHHHHHHHhhhcceEEEe-------ccCCceEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence 6666666777666664 234568889986 56998873 23468999996 478999999999999998754
No 255
>PRK08354 putative aminotransferase; Provisional
Probab=99.90 E-value=1.6e-20 Score=185.36 Aligned_cols=293 Identities=17% Similarity=0.191 Sum_probs=190.8
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHH-HHh
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTN-SAI 177 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~-~~~ 177 (489)
..+|||+.+ |++ + ++.+.+++.+++.... .. +....+++.++++.+. .|++++|++.. ..+
T Consensus 8 ~~~i~l~~~~np~--~--p~~~~~a~~~~~~~~~-~y----------p~~~~l~~~ia~~~~~--~I~vt~G~~~al~~~ 70 (311)
T PRK08354 8 EGLIDFSASVNPY--P--PEWLDEMFERAKEISG-RY----------TYYEWLEEEFSKLFGE--PIVITAGITEALYLI 70 (311)
T ss_pred cceeEecCCCCCC--C--CHHHHHHHHHHHHHhh-cC----------CChHHHHHHHHHHHCC--CEEECCCHHHHHHHH
Confidence 458999865 443 2 4677888877765422 11 1136789999999884 57788887766 444
Q ss_pred HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC
Q 046230 178 LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257 (489)
Q Consensus 178 ~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~ 257 (489)
+ .+..+|+.|+++.|+|..+...++..|++++.++ .|++.|++.+++ .+.++++ +.+|++|...
T Consensus 71 ~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~-------------~~~vi~~-~P~NPTG~~~ 134 (311)
T PRK08354 71 G-ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVER-------------NSVVFFC-NPNNPDGKFY 134 (311)
T ss_pred H-HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcC-------------CCEEEEe-cCCCCCCCcc
Confidence 4 4445899999999999999999999999987764 467777766542 3444444 4479999987
Q ss_pred C---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHH
Q 046230 258 K---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLK 331 (489)
Q Consensus 258 ~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~ 331 (489)
+ +++|+++|+++|+++|+||+|. .|...+.. .. .+..|+++||||+||.+| ||+++ +++.++
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~--~f~~~~~~------~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~ 202 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFI--DFVKKPES------PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFR 202 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcch--hccccccc------cC-CCcEEEEeccHhhcCCccceeeeeee---hHHHHH
Confidence 6 6788888999999999999998 66443321 11 233589999999999879 99998 556666
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCc
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAK 410 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~ 410 (489)
.....+ . .+....+++.+.++- . .++++++.+.+++..+.+ +.....+ .+.++.+.+ ..
T Consensus 203 ~~~~~~--~--~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~---~~ 262 (311)
T PRK08354 203 SVRMPW--S--IGSTGYAFLEFLIED--------D----FEHLRKTMPLIWREKERFEKALYVKS-DANFFIKDV---GD 262 (311)
T ss_pred HcCCCc--c--CCHHHHHHHHHHHHh--------H----HHHHHHHHHHHHHHHHHHHHhcCCCC-CCcEEEEEC---CC
Confidence 544322 2 444444333333220 1 122223333333333332 1112223 344444433 24
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
..++++.|.++||.+.+...+.. .+++||+++ ++++.++++++|+++
T Consensus 263 ~~~~~~~l~~~gv~v~~g~~f~~---~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 263 AEKFVEFLKRNGILVRDCTSFGL---PGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHCCeEEEecccCCC---CCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 57899999999999998543322 379999994 566777777777654
No 256
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=1.5e-21 Score=197.82 Aligned_cols=283 Identities=18% Similarity=0.171 Sum_probs=204.9
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh----cCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~Le 221 (489)
+...+|++.+|++.|.+++++++||++++..++.++.++||.|+++.+.|+.....+.. .|..+..++..|+++++
T Consensus 61 pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~ 140 (386)
T PRK06767 61 PTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIE 140 (386)
T ss_pred cchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHH
Confidence 44589999999999999999999999988888888899999999999999887665433 35556556667888888
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
++++. ++.+|++|++.|++|.+.++++|.++|+++|+++|+|++|+.+.++. .. . ..
T Consensus 141 ~~i~~-------------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---pl----~---~g 197 (386)
T PRK06767 141 NKIRP-------------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR---PL----E---LG 197 (386)
T ss_pred HhhCc-------------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC---ch----h---cC
Confidence 87753 34578889999999999999999999999999999999997443321 11 1 23
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
+|+++.|++|.+++.| |+++++++.++.+...... ..+..++|..+++++..|+.+ ..++++.+++
T Consensus 198 ~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~-~~g~~~~~~~a~l~~~~L~tl---------~~r~~~~~~~ 267 (386)
T PRK06767 198 CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK-DIGGIMAPFDAWLLLRGLKTL---------AVRMDRHCDN 267 (386)
T ss_pred CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHH-HhCCCCCHHHHHHHHcCCCcH---------HHHHHHHHHH
Confidence 4899999999997754 8999998887765432211 234457888777777666643 5688889999
Q ss_pred HHHHHHHHHhC-CCeeeC-----------CCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeec------CCCc-----
Q 046230 378 SNFFRSELQKM-GFEVLG-----------DNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVA------FPAT----- 433 (489)
Q Consensus 378 ~~~l~~~L~~~-g~~v~~-----------~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~------~p~~----- 433 (489)
...+.+.|+++ ++..+. ...+.++.+.+... ....+|.+.|...++.+.-.+ .|..
T Consensus 268 a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~ 347 (386)
T PRK06767 268 AEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAA 347 (386)
T ss_pred HHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCcccccc
Confidence 99999999988 554221 12355677776422 345678888876665554321 1211
Q ss_pred ---------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 434 ---------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 434 ---------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
....+.+||++.. ||.+.+++-|+++++
T Consensus 348 ~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 348 IPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred CCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 0124689999964 556666666666664
No 257
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=3.5e-20 Score=181.83 Aligned_cols=322 Identities=22% Similarity=0.268 Sum_probs=235.6
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEe-CccHHHHHHhHhhhcCCCCEEEE-cCCC
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVF-GMGYVTNSAILPVLMRKGSLIIS-DSLN 194 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~-~sG~~a~~~~~~al~~~g~~Vl~-~~~~ 194 (489)
.+...+.+++.+-..+..+. -...+..++.+.|...++.+ +.+++ +||+.+..+++..+..|||.|++ ....
T Consensus 15 ~v~~~V~~am~~~~~~h~s~----~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~ 90 (383)
T COG0075 15 PVPPRVLLAMARPMVGHRSP----DFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGK 90 (383)
T ss_pred CCCHHHHHHhcCCCCCCCCH----HHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCh
Confidence 44555555555422222111 13566788889999999976 55555 88899899999999999887764 5555
Q ss_pred chHHH-HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH
Q 046230 195 HNSIV-NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK 268 (489)
Q Consensus 195 h~~~~-~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~ 268 (489)
|+..+ .-++..|+++..+... |+++++++|++. +..+ +|.+-..-+.+|...|+++|.++|++
T Consensus 91 FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~----------~~~~-~V~~vH~ETSTGvlnpl~~I~~~~k~ 159 (383)
T COG0075 91 FGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD----------PDIK-AVAVVHNETSTGVLNPLKEIAKAAKE 159 (383)
T ss_pred HHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC----------CCcc-EEEEEeccCcccccCcHHHHHHHHHH
Confidence 65543 4567788888877544 899999999853 2233 44444445568999999999999999
Q ss_pred cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCCC-c--------
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCPA-H-------- 337 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~~-~-------- 337 (489)
||+++|+|.+-|+|+. .+.++..++|+++++--|+++ ++| |++..+++..+.+....+. +
T Consensus 160 ~g~l~iVDaVsS~Gg~---------~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~ 230 (383)
T COG0075 160 HGALLIVDAVSSLGGE---------PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWL 230 (383)
T ss_pred cCCEEEEEecccCCCc---------ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHH
Confidence 9999999999998854 556666677999999999995 668 9999998888777654332 1
Q ss_pred -------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCCe-EEEEeCC
Q 046230 338 -------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSPV-MPIMLYN 407 (489)
Q Consensus 338 -------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~~-~~~~~~~ 407 (489)
.|-.+.+.....+..++|+.|..+ ..+++.+++++++++++++++++|+++..+. .++. ..+..+.
T Consensus 231 ~~~~~~~~~p~Tppv~~i~aL~~al~~i~~E----Gle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~ 306 (383)
T COG0075 231 KYMEKKGSTPYTPPVNLIYALREALDLILEE----GLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPE 306 (383)
T ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCC
Confidence 112236667788889999999643 4689999999999999999999999987632 2443 3344444
Q ss_pred CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 408 PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 408 ~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
..+..++...++++ |+.+..... +.....+||..--..+.+|+..++.+|+.++.+++.+.
T Consensus 307 g~~~~~~~~~~~~~~g~~i~gg~~---~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~ 368 (383)
T COG0075 307 GVDDKKVRRALLKEYGVEIAGGQG---PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKV 368 (383)
T ss_pred CCCcHHHHHHHHHhCCEEeccccc---ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 44444455567776 887774322 34557899997778999999999999999999998754
No 258
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.90 E-value=7e-21 Score=197.98 Aligned_cols=322 Identities=15% Similarity=0.149 Sum_probs=212.4
Q ss_pred CccchHHHHHHHHHhCCCCCC-cccCCCcchhHHHHHHHHHHHhCCCCEEEe-CccHHHHHHh---Hh-hhcCCCC----
Q 046230 117 DEYCTPRVIESLKKYSPSTCS-SRVDGGTLMVHNELEECVARFVGKPAAIVF-GMGYVTNSAI---LP-VLMRKGS---- 186 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~~---~~-al~~~g~---- 186 (489)
+|.+.+++.+.-.-++..... .....|..++..++++.+++++|.+.+.++ ++|+.+.... ++ .+..+|+
T Consensus 83 ~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~ 162 (481)
T PRK04366 83 NPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRT 162 (481)
T ss_pred CHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCC
Confidence 566666666542111211111 124557788889999999999998765555 6676665322 32 2344554
Q ss_pred EEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC-CChH
Q 046230 187 LIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL-CKFP 260 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~-~~l~ 260 (489)
.|+++.+.|+++...++..|++++.++.+ |+++|++.+.. +.+ +|++.... ++|.+ .+++
T Consensus 163 ~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~------------~t~-~V~v~~Pn-~tG~~~~dl~ 228 (481)
T PRK04366 163 EVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGE------------DTA-ALMLTNPN-TLGLFERNIL 228 (481)
T ss_pred EEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhccc------------CCe-EEEEeCCC-CccccchHHH
Confidence 89999999999999999999999888763 77888877753 234 44444433 67877 5899
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc------c-eEEEeCHHHHHHHHhh
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC------G-GYIAGSKELIQYLKYT 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~------G-G~i~~~~~~~~~l~~~ 333 (489)
+|.++|+++|+++++|+++..+.+|.... .. .++|+++++.+|+|+.+ | |+++.++++.+.+...
T Consensus 229 eI~~~a~~~gal~iVD~a~~~~~~g~~~~---~~-----~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~ 300 (481)
T PRK04366 229 EIAEIVHEAGGLLYYDGANLNAILGKARP---GD-----MGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVP 300 (481)
T ss_pred HHHHHHHHcCCEEEEEecChhhhcccCCc---cc-----cCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCC
Confidence 99999999999999999998554443211 11 23499999999998622 3 7888888877766311
Q ss_pred -----CCCcccc------------cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 334 -----CPAHLYA------------TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 334 -----~~~~~~~------------~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
...+.+. ++.+...+.++...+..+ +.+..++..++...+.++++++|+++ +.+...
T Consensus 301 ~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~----G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~- 374 (481)
T PRK04366 301 VVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSL----GAEGLREVSEDAVLNANYLKARLKDI-YDLPYD- 374 (481)
T ss_pred eeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC-
Confidence 0011111 112333344444444443 23234455677788899999999987 444322
Q ss_pred CCCeEEEEeCC------CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 397 DSPVMPIMLYN------PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 397 ~~~~~~~~~~~------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
...+..+.+.. .....++.++|.++||.+....+|..+ .+.+|++++..+|++|||+++++|.++.+++.
T Consensus 375 ~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~--~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 375 RPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIV--PEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred CCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccccc--CCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111122211 135778999999999987655555432 46899999999999999999999999988765
No 259
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.3e-21 Score=200.36 Aligned_cols=296 Identities=17% Similarity=0.110 Sum_probs=189.6
Q ss_pred HHHHHHHHH-Hh-----CC-----CCEEEeCccHHHH-HHhHhh-----hcCCCCEEEEcCCCchHHHHHHHhcCC--eE
Q 046230 149 NELEECVAR-FV-----GK-----PAAIVFGMGYVTN-SAILPV-----LMRKGSLIISDSLNHNSIVNGARGSGA--TI 209 (489)
Q Consensus 149 ~~l~~~la~-~~-----g~-----~~~i~~~sG~~a~-~~~~~a-----l~~~g~~Vl~~~~~h~~~~~~~~~~g~--~~ 209 (489)
.++++++++ +. +. ++.|++++|+.+. ..++.+ ++++||.|++..|+|..+...+.+.|. .+
T Consensus 137 ~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~ 216 (527)
T PRK09275 137 LKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEV 216 (527)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEE
Confidence 566666665 22 11 2368787776665 555554 689999999999999999988887754 44
Q ss_pred EEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHH--cCcEEEEEc
Q 046230 210 RVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKK--YKAYIYLDE 277 (489)
Q Consensus 210 ~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~--~~~~li~DE 277 (489)
+.++.+ |.+++++++.. +.++++++ +.+||+|.+.+ +++|+++|++ ++++||+||
T Consensus 217 v~v~~~~~~~f~~d~~~l~~~~~~------------~tkai~l~-nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DE 283 (527)
T PRK09275 217 VHINADEENEWQYPDSELEKLRDP------------SIKALFLV-NPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDD 283 (527)
T ss_pred EEeecCcccCCCCCHHHHHhhcCC------------CCCEEEEe-CCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECC
Confidence 455321 55677765432 35555555 66899999877 7889999965 499999999
Q ss_pred ccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHH-----HHHHH-------------------
Q 046230 278 AHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKE-----LIQYL------------------- 330 (489)
Q Consensus 278 a~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~-----~~~~l------------------- 330 (489)
+|. .|...... .....| +..|++.||||.||.+| ||++++++ +++.+
T Consensus 284 vY~--~f~~~~~s---~~~~~~-~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p 357 (527)
T PRK09275 284 VYG--TFVDDFRS---LFAVLP-YNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDP 357 (527)
T ss_pred CCh--hhcccccC---HHHhCC-CCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCc
Confidence 998 55432111 122223 23589999999999989 99999875 33222
Q ss_pred -------------HhhCCCcccccCCCHHHHHH-HHHHHH-HHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 331 -------------KYTCPAHLYATSISPPAAEQ-IISAIK-VILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 331 -------------~~~~~~~~~~~~~~p~~~aa-~~a~L~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
+.....++. +.+.+.+.+ ++.++- .+.. .....++.++.++++.+.+.+.|. .++....+
T Consensus 358 ~~~~fidrlvad~~~v~~~~t~--~~s~p~Q~a~al~~~~all~~--~~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p 432 (527)
T PRK09275 358 EKLKFIDRLVADSRQVALNHTA--GLSTPQQVQMALFSLFALLDE--EDAYKKAMKDIIRRRYKALYEGLG-LPEPEDPN 432 (527)
T ss_pred chhhhHHHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHhC--chHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCC
Confidence 222222222 344444443 322221 1211 122456677788888888877772 23332344
Q ss_pred CCCCeEEEEeCCC----------------CcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNP----------------AKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 396 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
.+++.+++.+... ....+|+.+|+++ ||.+.|...... .++++|+++. ..+++++.++.+
T Consensus 433 ~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~--~~~~vRis~a-~~~~~~~~~~~~ 509 (527)
T PRK09275 433 NAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG--PEWSVRVSLA-NLNEEDYAKIGK 509 (527)
T ss_pred CeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC--CCCeEEEEEe-cCCHHHHHHHHH
Confidence 5565555554321 1356788888877 999998332222 2468999993 578999999999
Q ss_pred HHHHHHHHhCCcc
Q 046230 459 VISRVGDLVGIKY 471 (489)
Q Consensus 459 ~l~~~~~~~~~~~ 471 (489)
+|.+++++...++
T Consensus 510 rl~~~l~~y~~~~ 522 (527)
T PRK09275 510 AIRKLLDEYYEEY 522 (527)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998776544
No 260
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.89 E-value=2.3e-21 Score=194.97 Aligned_cols=306 Identities=17% Similarity=0.222 Sum_probs=206.9
Q ss_pred CCccchHHHHHHHHH-hCCCCCCcc-cCCC--cchhHHHHHHHHHHHhCCC-CEEEeCcc-HHHHHHhHhhhc----CCC
Q 046230 116 SDEYCTPRVIESLKK-YSPSTCSSR-VDGG--TLMVHNELEECVARFVGKP-AAIVFGMG-YVTNSAILPVLM----RKG 185 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~-~~~~~~~~~-~~~g--~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~al~----~~g 185 (489)
.++.+.+++.+.+.. ++.. +.+ ...+ ..+..++++++++++++.+ +.+++++| ++++..++.++. .+|
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g 87 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFGNP--SSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKG 87 (353)
T ss_pred CCHHHHHHHHHHHHhcCCCC--CchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCC
Confidence 467888888888755 3221 111 1111 2355788999999999975 56777666 556666666664 245
Q ss_pred -CEEEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 186 -SLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 186 -~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
+.|+++...|+++.... +..|++++.++.+ |+++|++.+++ ++.+|++..+.+++|.+
T Consensus 88 ~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~lv~~~~~~n~tG~~ 154 (353)
T TIGR03235 88 KKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP-------------DTLLVSIMHVNNETGSI 154 (353)
T ss_pred CCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC-------------CCEEEEEEcccCCceec
Confidence 78999999999876554 3458888887653 67888877643 34577778899999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHH--Hhh
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYL--KYT 333 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l--~~~ 333 (489)
.|+++|.++|+++|+++++|++|++|.. .++++..++|+++.|.+|++|++| |+++.+++..+.. ...
T Consensus 155 ~~~~~I~~l~~~~~~~~ivD~a~~~g~~---------~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~ 225 (353)
T TIGR03235 155 QPIREIAEVLEAHEAFFHVDAAQVVGKI---------TVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPI 225 (353)
T ss_pred cCHHHHHHHHHHcCCEEEEEchhhcCCc---------cccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCce
Confidence 9999999999999999999999997654 233433457999999999998877 8888887643221 110
Q ss_pred CC--C---cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC---CCeEEEEe
Q 046230 334 CP--A---HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND---SPVMPIML 405 (489)
Q Consensus 334 ~~--~---~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~---~~~~~~~~ 405 (489)
.. . .....+.++...++..++|+.+.. ..++..++++++.+++++.|++.|+++..+.. ..++.+.+
T Consensus 226 ~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 226 MFGGGQERGLRPGTLPVHLIVGMGEAAEIARR-----NAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred eeCCCCcCccccCCCChHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEe
Confidence 00 0 011224667778888889988731 45678899999999999999989998865432 23444443
Q ss_pred CCCCcHHHHHHHHhhCCceEEeecCCCcC-CCCCeEEEeecCCCCHHHHH
Q 046230 406 YNPAKIPAFSRECLRQNVAVVTVAFPATP-LLLARARICISASHTKEDLI 454 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-~~~~~iRi~~~~~~t~edid 454 (489)
. .....++.+.|.+ +|.+.+...++.. .+..++|.++ ..+++++.
T Consensus 301 ~-~~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~--g~~~~~~~ 346 (353)
T TIGR03235 301 D-GVNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAM--GLDTDRAR 346 (353)
T ss_pred C-CcCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHc--CCCHHHhC
Confidence 3 3456778888864 8888863332221 1223455555 34554443
No 261
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=7.2e-21 Score=191.51 Aligned_cols=283 Identities=14% Similarity=0.171 Sum_probs=203.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
++.+..||++||++.|.+.+++++||++|+..++.++.++||.|++..+.|+....- ....|.++..++.++.+++
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l 128 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDI 128 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 355689999999999999999999999999989999999999999888888765432 3445788877776665677
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|++|.+.|++|.+.++++|+++|+++|+++|+|++|+.|.+.+ . . ..
T Consensus 129 ~~~i~~-------------~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---p----l---~~ 185 (377)
T TIGR01324 129 ATLIQP-------------NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---P----L---EH 185 (377)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---c----c---cc
Confidence 776643 34578889999999999999999999999999999999999765432 1 1 12
Q ss_pred CccEEEcccccccCCc----ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
++||+++|++|.+++. ||+++++++.++.++.. ...++..++|..+..++..|+.+ ..++++..+
T Consensus 186 gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl---------~~R~~~~~~ 254 (377)
T TIGR01324 186 GVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTL---------GVRLKQHQE 254 (377)
T ss_pred CceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhH---------HHHHHHHHH
Confidence 4499999999999754 38899998887777643 23466778998888888888755 567888888
Q ss_pred HHHHHHHHHHhCC-C-eee-C---------------CCCCCeEEEEeCC--CCcHHHHHHHHhhCCceEEeecC------
Q 046230 377 NSNFFRSELQKMG-F-EVL-G---------------DNDSPVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAF------ 430 (489)
Q Consensus 377 ~~~~l~~~L~~~g-~-~v~-~---------------~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~------ 430 (489)
++..+.+.|++.. + .|+ + ...+.++.+.+.. .....+|.+.|.-.++.+.-.+.
T Consensus 255 ~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~ 334 (377)
T TIGR01324 255 SSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALC 334 (377)
T ss_pred HHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeec
Confidence 8888888888752 1 111 1 1235677777743 22345666666654444322111
Q ss_pred --CCc--------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 431 --PAT--------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 431 --p~~--------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
|.. ....+.+||++.. ||.|.+++.|+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 335 NQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred CCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 101 0123579999864 456666666666654
No 262
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.89 E-value=5.9e-21 Score=182.30 Aligned_cols=336 Identities=16% Similarity=0.173 Sum_probs=230.8
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCC---------CcccCCCcchhHHHHHHHHHHHhCC---------C-CEEEeCccH
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTC---------SSRVDGGTLMVHNELEECVARFVGK---------P-AAIVFGMGY 171 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~---------~~~~~~g~~~~~~~l~~~la~~~g~---------~-~~i~~~sG~ 171 (489)
+|++.| ..|.+-+...+++.+.... ..-..+-......++++.+|+|+.. + ..++.+.++
T Consensus 78 mGlaEN-qlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T 156 (471)
T KOG0256|consen 78 MGLAEN-QLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGAT 156 (471)
T ss_pred hhhhhh-HHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccc
Confidence 556655 5666766666666221111 0001111122336788889988752 2 445556667
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh-cCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARG-SGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~-~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.+|..+..+++.||+..+++.|+|+.+...++. .|.+++++... +.++||+++.++...+ .++..
T Consensus 157 ~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~-------~kVkG 229 (471)
T KOG0256|consen 157 SANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLG-------LKVKG 229 (471)
T ss_pred hhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhC-------CceeE
Confidence 778999999999999999999999998776654 47888876533 6899999999887765 34445
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccC---CCCCCccEEEcccccccCCc
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLE---VDTADVDIMMGTFTKSFGSC 316 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~---v~p~~~Di~~~t~sK~~g~~ 316 (489)
|++-+.+++-|++.+ |..++.+|.++++.+|+||+|+...|+..+-. +.+... .+++.+ -++.|+||-||.+
T Consensus 230 vlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rv-HivyslSKD~Glp 308 (471)
T KOG0256|consen 230 VLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRV-HIVYSLSKDFGLP 308 (471)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcE-EEEEEeccccCCC
Confidence 555566788888755 78888999999999999999997777766432 333322 134444 4556999999999
Q ss_pred c---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHH---HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 046230 317 G---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAE---QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 317 G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~a---a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
| |.|.+. +.+....+..+. |+ ..++..+. +.+.--++.+ ....+..+|++...+++.++|+++|
T Consensus 309 GfRvGviYS~ne~VvsaA~kmss---f~-~vSs~tQ~~la~LLSD~~f~~-----~yl~en~~Rl~~rh~~~~~gLk~lg 379 (471)
T KOG0256|consen 309 GFRVGVIYSNNEDVVSAATKMSS---FG-LVSSQTQYLLASLLSDEEFTR-----EYLRENNKRLRIRHRYIVEGLKALG 379 (471)
T ss_pred ceEEEEEEecChHHHHHHHHHhh---cc-CCcHHHHHHHHHHhchHHHHH-----HHHHHHHHHHHHHHHHHHhhHHhcC
Confidence 9 998775 667666665543 22 13333333 3332212221 1467788899999999999999999
Q ss_pred CeeeCCCCCCeEEEEeCCC------CcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 390 FEVLGDNDSPVMPIMLYNP------AKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 390 ~~v~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
++......|.+.|+.+..- ..-.++.+++.++ ++.+.|...... ...+|+|+|+ ++..++.++-++++|..
T Consensus 380 I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C-~EpGWFRvcF-An~~~~t~~~am~Ri~~ 457 (471)
T KOG0256|consen 380 IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHC-HEPGWFRVCF-ANMSEETLEVAMRRLKQ 457 (471)
T ss_pred CceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCccee-cCCCeEEEEe-ccCCHHHHHHHHHHHHH
Confidence 9999888887777766421 2233678888888 999997433222 3458999999 36777777779999999
Q ss_pred HHHH
Q 046230 463 VGDL 466 (489)
Q Consensus 463 ~~~~ 466 (489)
.+..
T Consensus 458 ~~~~ 461 (471)
T KOG0256|consen 458 FLDS 461 (471)
T ss_pred HHHh
Confidence 8874
No 263
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=183.15 Aligned_cols=352 Identities=15% Similarity=0.105 Sum_probs=235.6
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHH-HHHHhCCCCCCcccCCCc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIE-SLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~-~l~~~~~~~~~~~~~~g~ 144 (489)
|..-..+.-|.|+.|+| |+.+||+-+. .-+.++.+||.++.++.+ ++.+.-..-.+-... ..
T Consensus 58 F~~dYEkS~GNYlvDvD---------------GN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~f-P~ 121 (484)
T KOG1405|consen 58 FFVDYEKSIGNYLVDVD---------------GNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNF-PP 121 (484)
T ss_pred EehhhhhhcCceEEecC---------------CCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCC-Ch
Confidence 33334567799999999 9999998432 335555567888777653 222211110000000 12
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc-------------------------CCC---CEEEE-cCC
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM-------------------------RKG---SLIIS-DSL 193 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~-------------------------~~g---~~Vl~-~~~ 193 (489)
.+..+.+.+.+.+..++ ...+..-+|+.+|..++++.. .|| -.|++ ...
T Consensus 122 kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~ga 201 (484)
T KOG1405|consen 122 KDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGA 201 (484)
T ss_pred hhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccc
Confidence 33444555555555444 344555788888855554421 122 13443 344
Q ss_pred CchHHHHHHHhcCCeEE------------------EecC------C------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 194 NHNSIVNGARGSGATIR------------------VFQH------N------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 194 ~h~~~~~~~~~~g~~~~------------------~~~~------~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.|+.+.........+.+ .+|. | .++++|++|.+.... ...+++
T Consensus 202 FHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k-------~~pVaa 274 (484)
T KOG1405|consen 202 FHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKK-------KKPVAA 274 (484)
T ss_pred cccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhc-------CCCeEE
Confidence 45544433332221111 0111 1 366788888876432 246889
Q ss_pred EEEcCcCCCCCCC----CChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcce
Q 046230 244 VIVEGIYSMEGEL----CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCGG 318 (489)
Q Consensus 244 vive~v~s~~G~~----~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~GG 318 (489)
+|+||++|.+|.- .+++.|+++|+||++.+|+||||+ +-|.||.. +.++++++ ..+|++ ||||-|-. ||
T Consensus 275 iIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT--GgGaTGk~WaHehw~l~-~PpD~v--TFSKK~q~-gG 348 (484)
T KOG1405|consen 275 IIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT--GGGATGKFWAHEHWNLD-SPPDVV--TFSKKFQT-GG 348 (484)
T ss_pred EEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec--CCCccCceeeehhcCCC-CCccce--ehhhhhhc-Cc
Confidence 9999999998865 459999999999999999999999 88999986 88999996 455999 99999976 66
Q ss_pred EEEeCHHHHHHHHhhCCCcccc-cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-----CCee
Q 046230 319 YIAGSKELIQYLKYTCPAHLYA-TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-----GFEV 392 (489)
Q Consensus 319 ~i~~~~~~~~~l~~~~~~~~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~v 392 (489)
|.... + ++.....-+|. ..+.|.-+..+.++++.| ..++++++....+++|..+|.++ +..-
T Consensus 349 ffh~~-~----frpn~pYrifNTWmGdP~k~lll~~vv~~I-------~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~ 416 (484)
T KOG1405|consen 349 FFHDE-E----FRPNEPYRIFNTWMGDPSKNLLLEEVVQEI-------KREDLLNNVAHVGKALLKGLLELQAKYPGKIN 416 (484)
T ss_pred cccCc-c----cCCCchHHHhhhhcCChHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh
Confidence 65432 2 22221111121 237788788888888888 67899999999999999999886 2212
Q ss_pred eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 393 LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
....++.++.+.+.++.....+...+..+|+.+. .-+...+||-|++..++...+-+++++++++..
T Consensus 417 ~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G-------GCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 417 NLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLG-------GCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred cccccceEEEEeCCChHHHHHHHHHHHHcCceec-------ccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 2234677788888888888899999999999887 344567999999999999999999999998764
No 264
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=7.6e-21 Score=192.72 Aligned_cols=283 Identities=15% Similarity=0.168 Sum_probs=204.3
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH----HHHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.+.+++++||+.++..++.++.++||.|++..+.|++.. ..+...|+++..++.+|++++
T Consensus 62 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 141 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAV 141 (389)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHH
Confidence 3456899999999999999999999999998888888999999999999988754 345557999999988899998
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+. +.+ +|++|++.++.+.+.++++|.++|+++|+++|+|++|+.+.+.. .. ..
T Consensus 142 ~~~i~-------------~tk-lV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p~-------~~ 197 (389)
T PRK05968 142 AKALP-------------GAK-LLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---PI-------TL 197 (389)
T ss_pred HHhcc-------------cCC-EEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---ch-------hc
Confidence 88762 133 56678888888888999999999999999999999997443221 11 12
Q ss_pred CccEEEcccccccCCc----ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
++|+++.|++|.++++ ||++++++++++.++.....+ .+..++|..++.++..|+.+ ..++++..+
T Consensus 198 g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---------~~r~~~~~~ 267 (389)
T PRK05968 198 GVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---------PLRMKAHEA 267 (389)
T ss_pred CCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---------HHHHHHHHH
Confidence 3489999999999864 488999999888877533222 23458888888887777744 778888888
Q ss_pred HHHHHHHHHHhC-CCeeeC-C-----------CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCC-----------
Q 046230 377 NSNFFRSELQKM-GFEVLG-D-----------NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPA----------- 432 (489)
Q Consensus 377 ~~~~l~~~L~~~-g~~v~~-~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~----------- 432 (489)
+...+.+.|+++ ++..+. + ..+.++.+.+.......+|.+.|...++.+.-.+..+
T Consensus 268 ~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~ 347 (389)
T PRK05968 268 SALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQ 347 (389)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccc
Confidence 899999999987 443222 1 1234677776544456678888876665554322211
Q ss_pred -c--------CCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 433 -T--------PLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 433 -~--------~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
. ....+.+|+++..-.+++-++.+-++|+
T Consensus 348 ~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 348 KAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred cCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 0124789999976554444444444443
No 265
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1e-20 Score=191.94 Aligned_cols=210 Identities=18% Similarity=0.213 Sum_probs=171.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|++.|.+.+++++||++++..++.++.++||.|+++.+.|+++... +...|+++..++..|++++
T Consensus 63 ~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l 142 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQI 142 (398)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHH
Confidence 466789999999999999999999999999888888899999999999999876432 4456888888888899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|+++.+.+++|.+.++++|.++|+++|+++|+|++|+.+... + ... .
T Consensus 143 ~~~i~~-------------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~---~----~l~---~ 199 (398)
T PRK08249 143 EAEIAK-------------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ---N----PLA---L 199 (398)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC---C----chh---h
Confidence 888754 3457778899999999999999999999999999999999833221 1 111 2
Q ss_pred CccEEEcccccccCCc----ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
..|+++.|++|.+++. ||++++++++++.++..... .+..++|..++.++..|+.+ ..++++..+
T Consensus 200 ~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~--~g~~~s~~~a~l~l~~l~tL---------~~R~~~~~~ 268 (398)
T PRK08249 200 GADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREI--NGATMDPMSAYLILRGMKTL---------KLRVRQQQE 268 (398)
T ss_pred CCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhCcchH---------HHHHHHHHH
Confidence 3489999999999864 48889999998888755432 44568999999888888865 567788889
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 269 na~~la~~L~~~ 280 (398)
T PRK08249 269 SAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHcC
Confidence 999999999875
No 266
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=1.8e-20 Score=190.01 Aligned_cols=210 Identities=17% Similarity=0.194 Sum_probs=166.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|++.|.++++++++|++|+..++.++.++||.|+++.+.|+++.. .+...|++++.++.+|++++
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 139 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAW 139 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 45578999999999999999999999999988888889999999999999987654 34557999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|+++.+.+++|.+.++++|.++|+++|+++|+|++++.+.+.. . .. .
T Consensus 140 ~~~i~~-------------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---p----l~---~ 196 (390)
T PRK08133 140 RAAVRP-------------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---P----LK---L 196 (390)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---c----hh---h
Confidence 887754 34577788899999999999999999999999999999987443211 1 11 1
Q ss_pred CccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+.|+++.|++|.+++.| |++++++++++.+...... .+..++|..+..++..++.+ ..++++..+
T Consensus 197 g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~--~g~~~~~~~a~~~l~gl~tl---------~~R~~~~~~ 265 (390)
T PRK08133 197 GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRT--AGPTLSPFNAWVFLKGLETL---------SLRMEAHSA 265 (390)
T ss_pred CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHH--hCCCCCHHHHHHHHcccchH---------HHHHHHHHH
Confidence 33899999999998755 8888888877766543322 23447787777776666644 667778888
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 266 ~a~~la~~L~~~ 277 (390)
T PRK08133 266 NALALAEWLEAH 277 (390)
T ss_pred HHHHHHHHHHhC
Confidence 888999999876
No 267
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=1e-19 Score=184.85 Aligned_cols=321 Identities=14% Similarity=0.167 Sum_probs=215.6
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHH
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSI 198 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~ 198 (489)
.+.+++.+++..-..+. +......+|++.+++++|.+.++.+++|++|+..++.+++++||.| ...+.|.++
T Consensus 33 ams~~~~~a~~~gd~~Y-------~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~ 104 (431)
T cd00617 33 AMSDYQWAAMMLGDEAY-------AGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTT 104 (431)
T ss_pred HHHHHHHHHHHhCCCcc-------CCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccch
Confidence 45555566665422111 2233348999999999999999999999999988899999999988 477788888
Q ss_pred HHHHHhcCCeEEEecC---------------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC-CCCCC---h
Q 046230 199 VNGARGSGATIRVFQH---------------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME-GELCK---F 259 (489)
Q Consensus 199 ~~~~~~~g~~~~~~~~---------------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~-G~~~~---l 259 (489)
...+...|+.++.++. -|+++|++.+.+. .+.++.+|+++...+++ |.+.+ +
T Consensus 105 ~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~---------~~~~~~~I~v~~p~N~~gG~~~s~~~l 175 (431)
T cd00617 105 RGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV---------GAENIPYIVLTITNNTAGGQPVSMANL 175 (431)
T ss_pred HHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcc---------cCCCccEEEEECCcCCCCCccCCHHHH
Confidence 8888888988876543 2678888888641 01234456666666654 77765 6
Q ss_pred HHHHHHHHHcCcEEEEEccccccc--c------cCCCCcccc----ccCCCCCCccEEEcccccccCC-cceEEEeCH-H
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGA--V------GKTGRGVCE----LLEVDTADVDIMMGTFTKSFGS-CGGYIAGSK-E 325 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~--~------g~~G~~~~~----~~~v~p~~~Di~~~t~sK~~g~-~GG~i~~~~-~ 325 (489)
++|.++|++||++||.|+++..+. + |..+..+.+ .++. .|....|+.|.++. .||++++++ +
T Consensus 176 ~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~----sd~~~mS~~K~~~~~~GG~i~~~d~~ 251 (431)
T cd00617 176 REVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY----ADGCTMSAKKDGLVNIGGFLALRDDE 251 (431)
T ss_pred HHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc----CCEEEEEeecCCCCccceEEEeCcHH
Confidence 788999999999999999987431 1 222222211 1222 26666677786643 379999986 6
Q ss_pred HHHHHHhhC---CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEE
Q 046230 326 LIQYLKYTC---PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMP 402 (489)
Q Consensus 326 ~~~~l~~~~---~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~ 402 (489)
+++.++... .++....++++-.++++..+|+... . .+.+++..++.+++.+.|++.|+++..+.+++.++
T Consensus 252 l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l~~~~~~r~~l~~~L~~~G~~v~~P~Ggh~v~ 324 (431)
T cd00617 252 LYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYLRHRVEQVRYLGDRLDEAGVPIVEPAGGHAVF 324 (431)
T ss_pred HHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHHHHHHHHHHHHHHHHHHCCCCccCCCcceEEE
Confidence 888887532 1221112455555555443665320 1 23334344455999999999999998888887777
Q ss_pred EEeCC--C------CcHHHHHHHHhhC-CceEEeecC---CCcCCC-------CCeEEEeecC-CCCHHHHHHHHHHHHH
Q 046230 403 IMLYN--P------AKIPAFSRECLRQ-NVAVVTVAF---PATPLL-------LARARICISA-SHTKEDLIKALEVISR 462 (489)
Q Consensus 403 ~~~~~--~------~~~~~~~~~l~~~-Gi~v~~~~~---p~~~~~-------~~~iRi~~~~-~~t~edid~~l~~l~~ 462 (489)
+.... + ....+|+.+|+++ ||.++-.+. +..|.+ -..+|+++|- ..|.+++|.+.++|.+
T Consensus 325 ~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~ 404 (431)
T cd00617 325 IDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIA 404 (431)
T ss_pred EEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHH
Confidence 66542 1 1367788777766 899775332 222222 3689999884 6899999999999999
Q ss_pred HHHHh
Q 046230 463 VGDLV 467 (489)
Q Consensus 463 ~~~~~ 467 (489)
+.++.
T Consensus 405 ~~~~~ 409 (431)
T cd00617 405 LYERR 409 (431)
T ss_pred HHhhH
Confidence 88763
No 268
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=5.8e-20 Score=187.01 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=167.9
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++.+|++.|.+.+++++||+.++..++.++.++||.|+++.+.|+.+.. .+...|+++..++.+|+++++
T Consensus 65 p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 144 (403)
T PRK07503 65 PTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALK 144 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHH
Confidence 4468999999999999999999999999988888889999999999998876443 345678999988888999998
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|+++.+.+++|.+.++++|.++|+++|+++|+|++|+.+..+ +. .+. .
T Consensus 145 ~~i~~-------------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~---~~----l~~---g 201 (403)
T PRK07503 145 AAISD-------------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ---RP----LEL---G 201 (403)
T ss_pred HhcCc-------------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----hhh---C
Confidence 88754 3346777899999999999999999999999999999999844221 11 122 3
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
.|+++.|++|.+++.| |++++++++++.++........+..++|..++.++..|+.+ +.+.++..++
T Consensus 202 ~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl---------~~r~~~~~~n 272 (403)
T PRK07503 202 ADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTL---------ALRMDRHCAS 272 (403)
T ss_pred CCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchH---------HHHHHHHHHH
Confidence 3899999999998754 88888899888886432222234568999998888888755 5667777788
Q ss_pred HHHHHHHHHhC
Q 046230 378 SNFFRSELQKM 388 (489)
Q Consensus 378 ~~~l~~~L~~~ 388 (489)
...+.+.|++.
T Consensus 273 a~~~a~~L~~~ 283 (403)
T PRK07503 273 AQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHhC
Confidence 88888888876
No 269
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=1.5e-19 Score=183.57 Aligned_cols=311 Identities=20% Similarity=0.215 Sum_probs=213.2
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
++-.+++.+++...... ..+...++++.++++++.+.++++++|++++..++.++ .++||.|+++.++|.
T Consensus 10 ~~~~~~v~~~~~~~~~~---------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~ 80 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT---------QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFV 80 (380)
T ss_pred HHHHHHHHHHHhcCCcc---------CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchH
Confidence 34466777766552111 12345889999999999998999999999998888888 789999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...+...|++++.++.+ |++++++.+.+. . .+..++++++ ++.|...++++|.++|++||
T Consensus 81 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~-~-------~~~t~~v~~~----~~~G~~~~~~~i~~l~~~~~ 148 (380)
T TIGR03588 81 ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAA-K-------GKLPKAIVPV----DFAGKSVDMQAIAALAKKHG 148 (380)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcc-c-------CCCceEEEEe----CCCCccCCHHHHHHHHHHcC
Confidence 9988888899999887652 788888888631 0 0123444433 24688899999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCC-cceEEEe-CHHHHHHHHhhCC-C---------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGS-CGGYIAG-SKELIQYLKYTCP-A--------- 336 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~-~GG~i~~-~~~~~~~l~~~~~-~--------- 336 (489)
++||+|++|++|.. ..|+. .|.. ...|+.+.||+ |.++. .||+++. ++++.+.++.... +
T Consensus 149 ~~lI~D~a~a~g~~-~~~~~----~g~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (380)
T TIGR03588 149 LKIIEDASHALGAE-YGGKP----VGNC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFE 222 (380)
T ss_pred CEEEEECCCcccCc-cCCEe----CCCc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCccccc
Confidence 99999999997643 23322 1220 12288887876 88854 3577765 4677766643210 0
Q ss_pred ------c-------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCC-C---C
Q 046230 337 ------H-------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGDN-D---S 398 (489)
Q Consensus 337 ------~-------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~~-~---~ 398 (489)
+ .+...++.+.++.+++.|+.+ ++..++-+++.+++.+.|..++ +.+.... . +
T Consensus 223 ~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l---------~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 293 (380)
T TIGR03588 223 KQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL---------DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSA 293 (380)
T ss_pred ccccCcceeeeeccccccCccHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeE
Confidence 0 011235666667677777644 6778888999999999998874 3322221 1 1
Q ss_pred -CeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCCc--C-------C---------CCCeEEEeecCCCCHHHHHHHH
Q 046230 399 -PVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPAT--P-------L---------LLARARICISASHTKEDLIKAL 457 (489)
Q Consensus 399 -~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~--~-------~---------~~~~iRi~~~~~~t~edid~~l 457 (489)
.+.++.+.. .....++.+.|.++||.+.....|.. | . ....+++.+....|++|+++++
T Consensus 294 ~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~ 373 (380)
T TIGR03588 294 WHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVV 373 (380)
T ss_pred EEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHH
Confidence 233444432 24577899999999998874322211 0 0 1156777777789999999999
Q ss_pred HHHHHHH
Q 046230 458 EVISRVG 464 (489)
Q Consensus 458 ~~l~~~~ 464 (489)
++|++++
T Consensus 374 ~~l~~~~ 380 (380)
T TIGR03588 374 ETLRKVL 380 (380)
T ss_pred HHHHHhC
Confidence 9998763
No 270
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.88 E-value=1.7e-20 Score=189.72 Aligned_cols=210 Identities=19% Similarity=0.236 Sum_probs=168.1
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++.++++.|.+.+++++||++++..++.++.++||.|+++.+.|++... .+...|.++..++.+|++++
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 132 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAW 132 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHH
Confidence 45568999999999999999999999999988888899999999999888876543 34556889888988888888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|++|++.++.|.+.++++|.++|+++|+++|+|++|+.+.+. . ....
T Consensus 133 ~~~i~~-------------~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~---~----pl~~--- 189 (380)
T TIGR01325 133 EAAVKP-------------NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ---Q----PLKL--- 189 (380)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---C----chhh---
Confidence 877643 3457888999999999999999999999999999999999733211 1 1112
Q ss_pred CccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+.||++.|++|.+++.| |++++++++++.++..... ++..++|..++.++..++.+ +.++++..+
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~--~g~~~~p~~a~~~l~~l~tl---------~~r~~~~~~ 258 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH--TGPAMSPFNAWVLLKGLETL---------SLRMQKQFD 258 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh--hCCCCCHHHHHHHHhccCcH---------HHHHHHHHH
Confidence 34999999999998654 8899999888887754332 34557888888777777755 557888888
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 259 ~a~~la~~L~~~ 270 (380)
T TIGR01325 259 SALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHcC
Confidence 899999999876
No 271
>PRK06460 hypothetical protein; Provisional
Probab=99.88 E-value=3e-20 Score=187.54 Aligned_cols=284 Identities=16% Similarity=0.187 Sum_probs=196.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCch----HHHHHHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHN----SIVNGARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~----~~~~~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.+.++++++|++++..++.++.++||.|++..+.|+ .+...++..|+++..++.++.+.+
T Consensus 44 ~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l 123 (376)
T PRK06460 44 NPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNII 123 (376)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHH
Confidence 4566899999999999999999999999888888899999999999876554 334566778999988888765555
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+++++ .++.+|++++++|++|.+.++++|+++|+++|+++|+||+|+.+. ... .+. .
T Consensus 124 ~~~~~-------------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~---~~~------~l~-~ 180 (376)
T PRK06460 124 EKAKS-------------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPI---NQK------PLE-L 180 (376)
T ss_pred HHhcC-------------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccc---cCC------hhh-c
Confidence 44332 134577789999999999999999999999999999999997321 111 111 2
Q ss_pred CccEEEcccccccCCc----ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+.||++.|+||++++. +|++++++++++.++..... ++.+++|..+..++..++.+ +.+++++.+
T Consensus 181 ~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~--~g~~~~~~~a~~~l~~~~~l---------~~r~~~~~~ 249 (376)
T PRK06460 181 GADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRT--LGTSLDPHAAYLTLRGIKTL---------KIRMDVINR 249 (376)
T ss_pred CCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhchhhH---------HHHHHHHHH
Confidence 3489999999999753 49999999999988765543 34447776666666666544 678889999
Q ss_pred HHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCCC-CcHHHHHHHHhh--CCceEE---e-ecCC
Q 046230 377 NSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYNP-AKIPAFSRECLR--QNVAVV---T-VAFP 431 (489)
Q Consensus 377 ~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~~-~~~~~~~~~l~~--~Gi~v~---~-~~~p 431 (489)
+.+++.+.|++.. +. | ++ ...+.++.+.+... .....|.+.|.- .+..+. . +..|
T Consensus 250 n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p 329 (376)
T PRK06460 250 NAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVISHP 329 (376)
T ss_pred HHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEeCc
Confidence 9999999999762 21 1 11 12355677776432 223345544431 111110 0 1112
Q ss_pred Cc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 432 AT--------------PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 432 ~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.. ....+.+||++.. ||.+.+++.|+++++.
T Consensus 330 ~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 330 ATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALST 374 (376)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 11 1235689999964 5666677777777654
No 272
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.88 E-value=3e-20 Score=191.86 Aligned_cols=276 Identities=17% Similarity=0.119 Sum_probs=178.4
Q ss_pred EEEeCccHHHH-HHhHhh-----hcCCCCEEEEcCCCchHHHHHHHhc--CCeEEEecCC------------CHHHHHHH
Q 046230 164 AIVFGMGYVTN-SAILPV-----LMRKGSLIISDSLNHNSIVNGARGS--GATIRVFQHN------------TPSHLEEV 223 (489)
Q Consensus 164 ~i~~~sG~~a~-~~~~~a-----l~~~g~~Vl~~~~~h~~~~~~~~~~--g~~~~~~~~~------------d~~~Le~~ 223 (489)
.|++++|+.+. ..++.+ ++.+||.|++..|+|..+...+.+. |..++.++.+ |.++++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 67777776665 555555 6899999999999999998887776 5666655432 34566654
Q ss_pred HHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCC
Q 046230 224 LREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 224 l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
+.. +.++++++ +..||+|.+.+ +++|+++|++| +++||.||+|. .|...... .....
T Consensus 237 ~~~------------~~kai~l~-nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~--~f~~~~~s---l~~~~ 298 (521)
T TIGR03801 237 RDP------------SIKALFVV-NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG--TFVDDFRS---LFAEL 298 (521)
T ss_pred cCC------------CCcEEEEe-CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch--hhcccccc---hhhhC
Confidence 322 34555555 56799998877 78889999987 99999999998 55432111 22222
Q ss_pred CCCccEEEcccccccCCcc---eEEEeCHH-----HH--------HHH------------------------HhhCCCcc
Q 046230 299 TADVDIMMGTFTKSFGSCG---GYIAGSKE-----LI--------QYL------------------------KYTCPAHL 338 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G---G~i~~~~~-----~~--------~~l------------------------~~~~~~~~ 338 (489)
|. ..|+++||||.||.+| ||++++++ ++ +.+ +.....++
T Consensus 299 ~~-~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~ 377 (521)
T TIGR03801 299 PY-NTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHT 377 (521)
T ss_pred CC-CEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhcc
Confidence 32 3588999999999989 99998754 22 111 11112222
Q ss_pred cccCCCHHHHHH-HH-HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee--eCCCCCCeEEEEeCCC------
Q 046230 339 YATSISPPAAEQ-II-SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV--LGDNDSPVMPIMLYNP------ 408 (489)
Q Consensus 339 ~~~~~~p~~~aa-~~-a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v--~~~~~~~~~~~~~~~~------ 408 (489)
.+ .+.+.+.+ ++ ++...+.. .....++.++.++++.+.+.+.| |+.+ ..+.++..+++.+...
T Consensus 378 ~g--~s~p~Q~q~al~a~~all~~--~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~ 450 (521)
T TIGR03801 378 AG--LSTPQQVQMALFSLFALMDK--ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYG 450 (521)
T ss_pred CC--CCcHHHHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcc
Confidence 22 34443331 22 22222211 12245667778888888887777 4443 3344566666655421
Q ss_pred ----------CcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 ----------AKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ----------~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....+|+.+|+++ ||.+.|......+ ++++|+++ +..+++++.++.++|.+++++..
T Consensus 451 ~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~--~~~vRisl-a~l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 451 EEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP--EWSVRVSL-ANLNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred hHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC--CCeEEEEe-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 1345788888876 9999983322222 45799999 35899999999999999987653
No 273
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.87 E-value=4.7e-20 Score=177.66 Aligned_cols=312 Identities=17% Similarity=0.154 Sum_probs=222.9
Q ss_pred HHHHHHHHHHhC--------CCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----
Q 046230 149 NELEECVARFVG--------KPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---- 215 (489)
Q Consensus 149 ~~l~~~la~~~g--------~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---- 215 (489)
.+|...+.+..+ .+-.+++|+|++.. ..+++.++++|+.|+++..+|.+....++..|+.+++++.+
T Consensus 103 peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi 182 (472)
T KOG0634|consen 103 PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGI 182 (472)
T ss_pred HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCC
Confidence 566666666554 13467777776554 99999999999999999999999999999999999999887
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccC-CCCc-
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGK-TGRG- 290 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~-~G~~- 290 (489)
++|.|++.+....... ...|+.+++..+.+-++++|.... -++|.+||+||++++|.||.|-+..+.. .+..
T Consensus 183 ~pE~l~~il~~w~~~~---~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~ 259 (472)
T KOG0634|consen 183 DPESLEEILSNWKPGS---YKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLE 259 (472)
T ss_pred CHHHHHHHHhcCCccc---ccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcc
Confidence 7899999987642210 012356788889999999998866 5799999999999999999999666652 0110
Q ss_pred ---------------cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHH
Q 046230 291 ---------------VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQII 352 (489)
Q Consensus 291 ---------------~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~ 352 (489)
+....+++-++..|-+.||||-+++ | ||+.+++.+++..-......+-+ .+...+..+.
T Consensus 260 ~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaP-GlRlG~it~~~~~l~ril~~ae~~t~~--pSg~sq~iv~ 336 (472)
T KOG0634|consen 260 LESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAP-GLRLGWITGNSLFLKRILDLAEVATSG--PSGFSQGIVY 336 (472)
T ss_pred ccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcC-cceeEEeecCHHHHHHHhhhcceeecC--cccccHHHHH
Confidence 1223445556667889999999998 8 99999998888776554432222 3444444444
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC---C-CeeeCCCCCCeEEEEeC-------CCCc-HH-HHHHHHh
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM---G-FEVLGDNDSPVMPIMLY-------NPAK-IP-AFSRECL 419 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~v~~~~~~~~~~~~~~-------~~~~-~~-~~~~~l~ 419 (489)
+.|+..-.+-...+..+++..+..+.+.+...|.+- + +.+.++.+|.++|+.+. .... .. .+...+.
T Consensus 337 a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~v 416 (472)
T KOG0634|consen 337 AMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAV 416 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHH
Confidence 555443110011245667777777788888888775 4 67788889999999885 1111 23 3445666
Q ss_pred hCCceEEeecCCCc-C--C-CCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 420 RQNVAVVTVAFPAT-P--L-LLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 420 ~~Gi~v~~~~~p~~-~--~-~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++||.+++.....+ | . ..-.+|++++ ....|++++++++|..++++.
T Consensus 417 k~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 417 KNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred HCCeEEecCceeEEcCccCCCcceEEEEee-cCCHHHHHHHHHHHHHHHHHH
Confidence 77999997333222 2 1 2238999996 567889999999999998874
No 274
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=2e-20 Score=189.16 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=165.3
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH---HhcCCeEEEecCCCHHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~d~~~Le 221 (489)
++...+||+++|++.|.++++++++|++|+..++.++.++||.|+++.+.|+++...+ ...|+++..+. .|+++++
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l~ 130 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDII 130 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHHH
Confidence 4556899999999999999999999999998888888999999999999999887655 34577766554 3678888
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+++++ .++.+|+++.+.|++|.+.++++|+++|+++|+++|+|++|+.+...+ + + ..+
T Consensus 131 ~~i~~------------~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---~------l-~~G 188 (385)
T PRK08574 131 EAIKE------------GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---P------L-RHG 188 (385)
T ss_pred HhcCc------------cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------h-hhC
Confidence 77753 134567789999999999999999999999999999999997553211 1 1 123
Q ss_pred ccEEEcccccccCCc----ce-EEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC----GG-YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~----GG-~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
.|+++.|++|.++++ || +++.++++.+.++..... ++..++|..++.++..|+.+ ..++++..+
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~--~g~~~~p~~a~l~l~~l~tL---------~~R~~~~~~ 257 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRR--LGTIMQPFEAYLVLRGLKTL---------EVRFERQCR 257 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccCcH---------HHHHHHHHH
Confidence 499999999999764 47 455578888877654432 45568898888888888755 567788888
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 258 na~~la~~L~~~ 269 (385)
T PRK08574 258 NAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHcC
Confidence 889999988875
No 275
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.3e-20 Score=171.14 Aligned_cols=314 Identities=19% Similarity=0.199 Sum_probs=221.9
Q ss_pred hHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc-CCCCEEEEcCCCchHHH
Q 046230 121 TPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM-RKGSLIISDSLNHNSIV 199 (489)
Q Consensus 121 ~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~-~~g~~Vl~~~~~h~~~~ 199 (489)
.+.|.+++.+-..+. -.+|..+-..+||+.+|+++|+|..+|++||+..|..+++.-+ .+|..|+++..+|-..+
T Consensus 35 TdeMr~am~eA~vgD----dVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~ 110 (384)
T KOG1368|consen 35 TDEMRRAMAEASVGD----DVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRY 110 (384)
T ss_pred hHHHHHHHhhcccCc----ccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEeccchheeeh
Confidence 455666665532222 1335555568999999999999999999999999977777765 59999999999997765
Q ss_pred HH---HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC-CCCC---hHHHHHHHH
Q 046230 200 NG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG-ELCK---FPEIIAICK 267 (489)
Q Consensus 200 ~~---~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G-~~~~---l~~i~~l~~ 267 (489)
.. ..+.|+.+++++.. |++++|+.++.. .| .+|.| .+.+|.+|+.++..| ...| +.+|.+||+
T Consensus 111 E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~--~G--D~H~p-~T~LIclENT~~~~Gg~vlPle~~~~v~~lak 185 (384)
T KOG1368|consen 111 EQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVP--KG--DCHMP-PTKLICLENTHNNCGGKVLPLEELDRVKALAK 185 (384)
T ss_pred hccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCC--CC--CccCC-CceEEEeeccccccCceEeeHHHHHHHHHHHh
Confidence 43 35567877776543 788999888742 11 34555 455788888887766 5556 568889999
Q ss_pred HcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEeCHHHHHHHHhhCCCcccccCCCHH
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKELIQYLKYTCPAHLYATSISPP 346 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~ 346 (489)
++|+-|..|.+.-+-+--..|-++..+. ...|-+.-+|||++|.| |+.+++++++++..+........+...+-+
T Consensus 186 ~~glkLH~DGARi~NAavasgV~vk~i~----~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsGv 261 (384)
T KOG1368|consen 186 RHGLKLHMDGARIFNAAVASGVPVKKIC----SAFDSVSICLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSGV 261 (384)
T ss_pred ccCCeeecchhhhhhHHHHcCCCHHHHH----HhhhhhhhhhhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHHH
Confidence 9999999999965333222232221111 11244555899999755 799999999998765544333333335667
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC-CCCCeEEEEeC-CCCcHHHHHHHHhhCCc
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGD-NDSPVMPIMLY-NPAKIPAFSRECLRQNV 423 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~-~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi 423 (489)
.+|+++-+|+. .-..++.-.++...+.+.+...+ +++..+ ..+.++.+.+. ......++++.+.+.||
T Consensus 262 LaaaaLval~~---------~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi 332 (384)
T KOG1368|consen 262 LAAAALVALDE---------NVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGI 332 (384)
T ss_pred HHHHHHHHhhc---------chHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCe
Confidence 78888888873 23356666667777777777774 766544 55666665554 34567789999999999
Q ss_pred eEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 424 AVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 424 ~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+.. ....++|+.+...+|+++++.++..+.+.
T Consensus 333 ~lm~-------~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 333 LLMG-------GASRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred EEee-------ccccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 9983 34467999999999999999999999543
No 276
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=3.9e-20 Score=187.97 Aligned_cols=209 Identities=15% Similarity=0.161 Sum_probs=166.4
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.+.++++++|+.++..++.++.++||.|+++.+.|+++...+ ...|++++.++..|+++++
T Consensus 65 p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 144 (398)
T PRK07504 65 PTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWE 144 (398)
T ss_pred chHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHH
Confidence 446899999999999999999999999997777778899999999999998764433 3458888888888899998
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
++++. ++.+|+++++.+++|.+.++++|.++|+++|+++|+|++|+.+.+.. .... +
T Consensus 145 ~ai~~-------------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~-------~~~~---g 201 (398)
T PRK07504 145 KAVRP-------------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK-------PLEL---G 201 (398)
T ss_pred HhcCc-------------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC-------chhh---C
Confidence 87753 34578889999999999999999999999999999999998543321 1111 3
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHH-HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQY-LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~-l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+|+++.|++|.++++| |+++++++.++. ++.... ..+..++|..++.++..|+.+ ..++++..+
T Consensus 202 aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~--~~g~~~s~~~A~~~l~~L~tl---------~~R~~~~~~ 270 (398)
T PRK07504 202 AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR--HTGPSLSPFNAWTLLKGLETL---------PVRVRQQTE 270 (398)
T ss_pred CCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccchH---------HHHHHHHHH
Confidence 4899999999997654 788888776643 332211 134469999999999998866 667888889
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 271 na~~la~~L~~~ 282 (398)
T PRK07504 271 SAAAIADFLAGH 282 (398)
T ss_pred HHHHHHHHHHcC
Confidence 999999999876
No 277
>PLN02368 alanine transaminase
Probab=99.87 E-value=5.5e-20 Score=187.00 Aligned_cols=251 Identities=14% Similarity=0.139 Sum_probs=175.3
Q ss_pred HHHHHHHHHHh----CC---CCEEEeCccHHHH-HHhHhhhc-CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----
Q 046230 149 NELEECVARFV----GK---PAAIVFGMGYVTN-SAILPVLM-RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---- 215 (489)
Q Consensus 149 ~~l~~~la~~~----g~---~~~i~~~sG~~a~-~~~~~al~-~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---- 215 (489)
.+|++.+|+++ |. ++.|++++|+... ..++.++. ++||.|+++.|+|..+...++..|++++.++.+
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~ 189 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESEN 189 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccC
Confidence 67888888877 42 4678888887755 77777877 799999999999999999999999998887643
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 216 ---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 216 ---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
|+++|++.++....++ .+.+++ ++.+.+|++|.+.+ +++|+++|++||++||+||+|. .+...+.
T Consensus 190 ~~~d~~~le~~i~~~~~~~------~~~k~l-~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~--~l~y~~~ 260 (407)
T PLN02368 190 WGLDVNNLRQSVAQARSKG------ITVRAM-VIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQ--QNIYQDE 260 (407)
T ss_pred CCCCHHHHHHHHHHHhhcC------CCeEEE-EEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCC
Confidence 6788888886421110 123444 44455899998866 7888999999999999999999 6554432
Q ss_pred --c--ccccc-CCCC----CCccEEEccccccc-CCcc---eEEE---eCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 290 --G--VCELL-EVDT----ADVDIMMGTFTKSF-GSCG---GYIA---GSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 290 --~--~~~~~-~v~p----~~~Di~~~t~sK~~-g~~G---G~i~---~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
. ..+.. ++.+ .+.-|+++||||+| |.+| ||++ +++++++.+..... ..+ +.+.+.+.++.+
T Consensus 261 ~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~--~~~~~~Q~aa~~ 337 (407)
T PLN02368 261 RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IAL--SPNVSGQIFMGL 337 (407)
T ss_pred CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccC--CCCcHHHHHHHH
Confidence 1 11111 1211 22358889999998 7789 9998 48889998877532 223 367677777777
Q ss_pred HHHHHH-ccCC----CchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcH
Q 046230 354 AIKVIL-GEDG----SSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKI 411 (489)
Q Consensus 354 ~L~~i~-~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~ 411 (489)
+|+--. ++.. ..+..+.++.++++.+++.+.|+++ |+.+..+.++.+++..+..+.+.
T Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp~~~ 401 (407)
T PLN02368 338 MVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPKA 401 (407)
T ss_pred HhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCCHHH
Confidence 764100 0000 0012346788899999999999998 88877777776655555555543
No 278
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.87 E-value=9e-20 Score=189.18 Aligned_cols=292 Identities=17% Similarity=0.199 Sum_probs=190.6
Q ss_pred CCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHhhhc-CCCCEEEEcCCCchHHHHHHHh----cCCeEEEecC
Q 046230 142 GGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SAILPVLM-RKGSLIISDSLNHNSIVNGARG----SGATIRVFQH 214 (489)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~al~-~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~~~~ 214 (489)
.|..+...++.+.+++++|.+ +.+.+++|+.++ .+++.++. .+++.|++..+.|+++...++. .|++++.++.
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 344555666778889999975 445555555544 66666664 6889999999999988877654 5889988887
Q ss_pred C----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE--EcccccccccCCC
Q 046230 215 N----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL--DEAHSIGAVGKTG 288 (489)
Q Consensus 215 ~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~--DEa~s~g~~g~~G 288 (489)
+ |+++|++.+.+ ++.+|++... +++|.+.|+++|.++|+++|+++++ |.+ ++|.+...+
T Consensus 188 ~~~~~d~~~l~~~i~~-------------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~ 252 (447)
T PRK00451 188 EDGVTDLEALEAAVDD-------------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPG 252 (447)
T ss_pred CCCCCCHHHHHHhcCC-------------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcc
Confidence 6 67778777643 3445555555 7799999999999999999999988 543 433321111
Q ss_pred CccccccCCCCCCccEEEc---ccccc--cCCcc-eEEEeCHHHHHHHHhh-------------------------CC-C
Q 046230 289 RGVCELLEVDTADVDIMMG---TFTKS--FGSCG-GYIAGSKELIQYLKYT-------------------------CP-A 336 (489)
Q Consensus 289 ~~~~~~~~v~p~~~Di~~~---t~sK~--~g~~G-G~i~~~~~~~~~l~~~-------------------------~~-~ 336 (489)
..++|++++ +|+|. ++++| |+++.++++++.+... .. .
T Consensus 253 ----------~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (447)
T PRK00451 253 ----------EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREK 322 (447)
T ss_pred ----------cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccc
Confidence 124488887 45555 44445 8888888888774210 00 0
Q ss_pred cccccCCCH-HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHH
Q 046230 337 HLYATSISP-PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAF 414 (489)
Q Consensus 337 ~~~~~~~~p-~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~ 414 (489)
.+.....+. +...++..+|+.+ .....++..+++.++.+++.++|+++ |+.+. . +..+..+.+..+....++
T Consensus 323 ~~~~~~~~~~~~~~aaa~~l~~~----~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~-~~~~~~~~v~~~~~~~~~ 396 (447)
T PRK00451 323 ATSNICTNQALNALAAAIYMSLL----GPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D-GPFFNEFVVRLPKPAEEV 396 (447)
T ss_pred ccccccccHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C-CCeEEEEEEecCCCHHHH
Confidence 000101111 1112233344443 12246788899999999999999998 57665 2 222211222223356789
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.++|.++||.......+..|...+.+|++++..+|++|+++++++|++++
T Consensus 397 ~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 397 NEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99999998875322222223234689999988899999999999998764
No 279
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.87 E-value=6.1e-20 Score=184.90 Aligned_cols=283 Identities=16% Similarity=0.185 Sum_probs=196.1
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
++...+|++++|++.|.+.++++++|++++..++ ++.++||.|++..+.|++... .+...|+++..++..|++++
T Consensus 51 ~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 129 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAI 129 (366)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHH
Confidence 4556899999999999999999999998886555 567899999999999887533 34457899999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|+++++.|+.|...++++|+++|+++|+++|+||+|..+.+.. . .. .
T Consensus 130 ~~~i~~-------------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---p----~~---~ 186 (366)
T PRK08247 130 EQAITP-------------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---P----LE---E 186 (366)
T ss_pred HHhccc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---c----hh---c
Confidence 988754 34577788888999999999999999999999999999996332221 1 11 2
Q ss_pred CccEEEcccccccCCc----ceEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..||+++|+||.+++. ||+++++ +++++.+...... .+..++|..+..+...|+.+ ..++++.+
T Consensus 187 g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~--~g~~~s~~~a~l~~~~l~tl---------~~r~~~~~ 255 (366)
T PRK08247 187 GADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNA--AGAVLSPFDSWLLIRGMKTL---------ALRMRQHE 255 (366)
T ss_pred CCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHh--cCCCCChHHHHHHHhccCcH---------HHHHHHHH
Confidence 3489999999999864 4888886 6777776544332 22347787777777776643 56777889
Q ss_pred HHHHHHHHHHHhC-CCe-eeCCCCCCeEEEEeCCCCcHHHHHHHHh----------hCCceEEeecCC--Cc--------
Q 046230 376 ENSNFFRSELQKM-GFE-VLGDNDSPVMPIMLYNPAKIPAFSRECL----------RQNVAVVTVAFP--AT-------- 433 (489)
Q Consensus 376 ~~~~~l~~~L~~~-g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~Gi~v~~~~~p--~~-------- 433 (489)
++.+.+.+.|++. ++. +..+..+.++.+.+.......+|.+.+. .+.+.+.|.... ..
T Consensus 256 ~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~ 335 (366)
T PRK08247 256 ENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIAN 335 (366)
T ss_pred HHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhc
Confidence 9999999999987 554 3333345555555532111223333222 112233221100 00
Q ss_pred CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 434 PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 434 ~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
....+.+||++.+ |+.+.+++.|+++++.
T Consensus 336 gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 336 GVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1224689999864 5566667777776654
No 280
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.87 E-value=2.8e-19 Score=182.15 Aligned_cols=328 Identities=14% Similarity=0.075 Sum_probs=224.9
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC---CEEE---eCccHHHHHHhHhhhc----C---
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP---AAIV---FGMGYVTNSAILPVLM----R--- 183 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~---~~sG~~a~~~~~~al~----~--- 183 (489)
+|++.+++.+.+.+......+ .....++.++..+.+++++|.+ +.+. .++||++|..++.+.. .
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s---~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDE---YPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CHHHHHHHHHHHhcCCCCccc---CccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 467778887777643211111 1223477788899999999976 2333 3788899855443322 1
Q ss_pred ------CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 184 ------KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 184 ------~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
.+..|++....|.++...++..|.+++.++.+ |+++|+++|++ ++.+|++-.+.+
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-------------~t~lV~~t~g~t 197 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE-------------NTIGVVCILGTT 197 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh-------------CCeEEEEEeCCC
Confidence 12479999999999999998888887776643 67888888865 356777777889
Q ss_pred CCCCCCChHHHHHHHHHc------CcEEEEEcccccccccC-CCCccccccCCCCCCccEEEccccccc-CCcc-eEEEe
Q 046230 252 MEGELCKFPEIIAICKKY------KAYIYLDEAHSIGAVGK-TGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAG 322 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~------~~~li~DEa~s~g~~g~-~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~ 322 (489)
.+|.+.|+++|.++|+++ |+++++|.+|+.+.+-. .++.- +++....+|.+..+.+|++ |+.| |+++.
T Consensus 198 ~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~---~~~~~~~~DSis~s~HK~~~~P~g~G~l~~ 274 (431)
T TIGR01788 198 YTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE---WDFRLPRVKSINVSGHKYGLVYPGVGWVIW 274 (431)
T ss_pred CCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch---hhcCCCCceEEEECchhccCCCCCcEEEEE
Confidence 999999999999999999 99999999999332100 11111 1122245688988999987 8888 88876
Q ss_pred CHH--HHHHHHhhCCC----c-ccccCCCHH--HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046230 323 SKE--LIQYLKYTCPA----H-LYATSISPP--AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV 392 (489)
Q Consensus 323 ~~~--~~~~l~~~~~~----~-~~~~~~~p~--~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v 392 (489)
++. +.+.+...... . .++...+.. ........|..+ +....++..++..++.++|.+.|++. ++++
T Consensus 275 r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~l----G~~G~~~i~~~~~~la~~l~~~L~~~~~~el 350 (431)
T TIGR01788 275 RDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRL----GREGYRKIMQNSLDVARYLAEEIAKLGPFEI 350 (431)
T ss_pred eChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 543 33333211000 0 011111211 223345555544 33467788899999999999999998 5888
Q ss_pred eCC-CCCCeEEEEeCC----CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 393 LGD-NDSPVMPIMLYN----PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 393 ~~~-~~~~~~~~~~~~----~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+ ...+++.+.+.. .....++.++|.++|+.+.....|+.-.+...+|+++...++++.++.+++.|.+++..+
T Consensus 351 ~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 351 ISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 765 567777777653 245678999999999987654445444456789999988899999999999999988764
No 281
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=7.2e-19 Score=178.08 Aligned_cols=306 Identities=19% Similarity=0.183 Sum_probs=205.8
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
++-.+++.+.+.. +... ..+...+|++++|+++|.+.++.+++|++++..++.++ .++||.|+++.+.|.
T Consensus 14 ~~e~~~~~~~l~~-~~~~--------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~ 84 (379)
T PRK11658 14 DEELAAVKEVLRS-GWIT--------TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHHHHHc-CCcc--------CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence 3446677776654 2111 13345899999999999998899999999998888888 789999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...+...|++++.++.+ |++++++.+.. +.++++.+ ++.|...++++|.++|+++|
T Consensus 85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~------------~tkav~~~----~~~G~~~d~~~i~~~a~~~g 148 (379)
T PRK11658 85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP------------RTKAIIPV----HYAGAPADLDAIRAIGERYG 148 (379)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc------------CCeEEEEe----CCCCCcCCHHHHHHHHHHcC
Confidence 9988888999999888653 67888877753 24444323 34788999999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC-cceEEEeC-HHHHHHHHhhC-CCc----------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-CGGYIAGS-KELIQYLKYTC-PAH---------- 337 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-~GG~i~~~-~~~~~~l~~~~-~~~---------- 337 (489)
+++|+|++|++|.. ..|+.+ +- ...++...+-+|.+.+ .||+++++ +++.+.++... ++.
T Consensus 149 i~vi~D~a~a~g~~-~~~~~~----g~--~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 221 (379)
T PRK11658 149 IPVIEDAAHAVGTY-YKGRHI----GA--RGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQ 221 (379)
T ss_pred CeEEEECCCccCCe-ECCeec----CC--CCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcc
Confidence 99999999997643 222221 11 1225663344477743 35888774 77777665421 110
Q ss_pred -----------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee-CCCC----C-Ce
Q 046230 338 -----------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL-GDND----S-PV 400 (489)
Q Consensus 338 -----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~-~~~~----~-~~ 400 (489)
.+...++.+.+|.++..|+.+ ++..++-+++.+++++.|+++++... .+.. + .+
T Consensus 222 ~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l---------~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 292 (379)
T PRK11658 222 GRAPQAEVLTPGYKYNLADINAAIALVQLAKL---------EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHL 292 (379)
T ss_pred cCCCcceeeccccccCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEE
Confidence 011235566666666666644 67788888889999999988754322 1111 1 23
Q ss_pred EEEEeCC---CCcHHHHHHHHhhCCceEEeecCCCc--------------CC----CCCeEEEeecCCCCHHHHHHHHHH
Q 046230 401 MPIMLYN---PAKIPAFSRECLRQNVAVVTVAFPAT--------------PL----LLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 401 ~~~~~~~---~~~~~~~~~~l~~~Gi~v~~~~~p~~--------------~~----~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
+++.+.. .....++.++|.++||.+.....|.. |. ....+-+-+....|++|+++++++
T Consensus 293 ~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 293 FIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA 372 (379)
T ss_pred EEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 3444432 23567899999999998663211110 00 113455555567899999999999
Q ss_pred HHHHH
Q 046230 460 ISRVG 464 (489)
Q Consensus 460 l~~~~ 464 (489)
|++++
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 98865
No 282
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=9.6e-20 Score=184.61 Aligned_cols=209 Identities=16% Similarity=0.179 Sum_probs=163.7
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh----cCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.+.+++++||++++..++.++.++||.|+++.+.|+++...+.. .|+.+..++..|+++++
T Consensus 61 p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~ 140 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVR 140 (388)
T ss_pred ccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHH
Confidence 44689999999999999999999999999989999999999999999999976544332 47778888888899998
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.+.+ ++.+|+++.+.+++|.+.++++|+++|+++|+++|+|++|+.+.... . .+ ..
T Consensus 141 ~~i~~-------------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---p----~~---~g 197 (388)
T PRK07811 141 AAITP-------------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ---P----LA---LG 197 (388)
T ss_pred HhcCc-------------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hC
Confidence 87754 34578888999999999999999999999999999999998543221 1 11 23
Q ss_pred ccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
.|+++.|++|.++++ ||++++ ++++.+.++..... .+...+|..++.++..|+. .+.++++..+
T Consensus 198 aDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~--~g~~~s~~~a~l~~~~L~t---------l~~R~~~~~~ 266 (388)
T PRK07811 198 ADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNG--AGAVPGPFDAYLTLRGLKT---------LAVRMDRHSE 266 (388)
T ss_pred CcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCc---------HHHHHHHHHH
Confidence 489999999999875 488776 46776766543322 2334677776666666664 3677888889
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 267 na~~la~~L~~~ 278 (388)
T PRK07811 267 NAEAVAEFLAGH 278 (388)
T ss_pred HHHHHHHHHHhC
Confidence 999999999876
No 283
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=3.7e-20 Score=176.52 Aligned_cols=326 Identities=16% Similarity=0.120 Sum_probs=217.3
Q ss_pred EecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc
Q 046230 103 LNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM 182 (489)
Q Consensus 103 id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~ 182 (489)
+||.|-|+-|- +|++.+++.++-.. + -..||..+...++++.+++.++++.++|++|||++|+.++.+.+
T Consensus 2 ~~f~SDn~~g~---~~~m~eam~~a~~~---~----~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 2 IDFRSDNVAGP---TPEMREALAAANAV---G----DDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CccccCccCCC---CHHHHHHHHhcccc---C----CCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhc
Confidence 45544443332 47777777654321 1 13457888889999999999999888888999999999999999
Q ss_pred CCCCEEEEcCCCchHHHHH--HH-hcCCeEEEecC-C----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 183 RKGSLIISDSLNHNSIVNG--AR-GSGATIRVFQH-N----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 183 ~~g~~Vl~~~~~h~~~~~~--~~-~~g~~~~~~~~-~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
.|+..|++....|-..... .. .++....++.. + ++++++..++.. . .|.+ .+..++.++..+..|
T Consensus 72 ~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~--d----~~~~-~~~~~~~e~~~te~G 144 (342)
T COG2008 72 QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPD--D----IHHA-PTPLAVLENTATEGG 144 (342)
T ss_pred CCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCC--C----cccC-CCceEEEeeccCCCc
Confidence 9999999999999776542 22 23333333322 2 789999888751 1 1222 233455555556678
Q ss_pred CCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHH
Q 046230 255 ELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYL 330 (489)
Q Consensus 255 ~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l 330 (489)
++.+ |++|.++||++|+.|++|.+.-.-++-.-|....++ ...+|++.-++||..+.++ +.++++.++++.+
T Consensus 145 tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~----~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a 220 (342)
T COG2008 145 TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTI----KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRA 220 (342)
T ss_pred eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHH----HhhCCEEEEecccCCcceeeeEEEcCHHHHHHH
Confidence 8866 778999999999999999995422332222112222 2456899889999998877 6667899988876
Q ss_pred HhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC
Q 046230 331 KYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA 409 (489)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~ 409 (489)
+.......-..+-.-+.+++.+..|+-- -....-.+.+++.+.|.+.|.+. |+++..++.++++.+.+....
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~-------~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~ 293 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDD-------VWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA 293 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhcc-------HHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH
Confidence 5433221112224556677777776521 12223334455599999999965 999988778888777765432
Q ss_pred -cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 410 -KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 410 -~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
........+..+|+++.+. ...+||+.+...|++|+++++..++++.
T Consensus 294 i~~l~~~~~~~~~~~~~~~~--------~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IEALRLAGALFYRGVLIGAH--------GEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHhhchhheeeeeccCC--------CceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 2223334444455555421 1479999999999999999999988754
No 284
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=1e-19 Score=184.86 Aligned_cols=209 Identities=16% Similarity=0.151 Sum_probs=168.3
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH----HHHHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.+++++++||+.++..++.++.++||.|+++...|+... ..++..|+.+..++.+|+++++
T Consensus 70 p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 149 (403)
T PRK07810 70 PTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWE 149 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHH
Confidence 446899999999999999999999999998888888999999999887775543 3355679999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+++.. ++.+|++|.+.|++|.+.++++|+++|+++|+++|+|++|+.+.+.. + + ..+
T Consensus 150 ~ai~~-------------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---~------~-~~g 206 (403)
T PRK07810 150 EALSV-------------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQR---G------L-PLG 206 (403)
T ss_pred HhcCc-------------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------h-hcC
Confidence 98864 34578889999999999999999999999999999999998553321 1 1 123
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHH-HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQ-YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~-~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+||++.|++|.+++.| |+++++++.+. .++.... ..+..++|..++.++..|+.+ +.++++..+
T Consensus 207 aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~--~~g~~~s~~~a~l~l~~L~tl---------~~R~~~~~~ 275 (403)
T PRK07810 207 ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR--HTGPALSAFNAWVLLKGLETL---------ALRVRHSNA 275 (403)
T ss_pred CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccCcH---------HHHHHHHHH
Confidence 4999999999997654 88888877654 3432211 134458999999999988865 778888888
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 276 ~a~~~a~~L~~~ 287 (403)
T PRK07810 276 SALRIAEFLEGH 287 (403)
T ss_pred HHHHHHHHHhcC
Confidence 989888999876
No 285
>PLN02509 cystathionine beta-lyase
Probab=99.86 E-value=2e-19 Score=184.28 Aligned_cols=208 Identities=17% Similarity=0.217 Sum_probs=163.8
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH----HHHHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~Le 221 (489)
+...++++.+|++.+.+.++++++|+++... +..+.++||.|+++.+.|+++. ..+...|+.++.++.+|+++++
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~ 211 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVA 211 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHH
Confidence 5678999999999999999999999877644 3457899999999999999875 3345679999999888988888
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.+.. ++.+|+++.+.+++|.+.++++|+++|++||+++|+|++|+.+.++. ..+ ..
T Consensus 212 ~ai~~-------------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~-------pl~---~g 268 (464)
T PLN02509 212 AAIGP-------------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR-------PLE---LG 268 (464)
T ss_pred HhCCc-------------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC-------hhh---cC
Confidence 87743 34578889999999999999999999999999999999998554432 111 23
Q ss_pred ccEEEcccccccCCc----ceEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC----GGYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~----GG~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+|+++.|++|.++++ ||+++.+ +.+.+.++..... .+..++|..++.++..|+.+ +.++++..+
T Consensus 269 aDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~--~g~~l~p~~A~l~lr~L~tL---------~~R~~r~~~ 337 (464)
T PLN02509 269 ADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNS--EGSGLAPFDCWLCLRGIKTM---------ALRIEKQQE 337 (464)
T ss_pred CcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHh--cCCCcCHHHHHHHHhhhhhH---------HHHHHHHHH
Confidence 499999999999764 3777764 4444443322211 23447899999999998866 678899999
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
+...+.+.|++.
T Consensus 338 nA~~la~~L~~~ 349 (464)
T PLN02509 338 NARKIAMYLSSH 349 (464)
T ss_pred HHHHHHHHHhcC
Confidence 999999999876
No 286
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.86 E-value=2.1e-18 Score=156.34 Aligned_cols=321 Identities=18% Similarity=0.280 Sum_probs=223.5
Q ss_pred ccchHHHHHHHHHhCCCCCC------cccCCCcchhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEE
Q 046230 118 EYCTPRVIESLKKYSPSTCS------SRVDGGTLMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIIS 190 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~------~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~ 190 (489)
..+.+++++++-+||.+.+- -+...-+.+....+.+.||+|+|.+.+- ++.|. ++-.+++.+++++||.|++
T Consensus 27 GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R-~t~GARe~KfavMhal~~~gd~vV~ 105 (382)
T COG1103 27 GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVR-VTAGAREAKFAVMHALCKEGDWVVV 105 (382)
T ss_pred CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceee-ecccchhhHHHHHHHhccCCCEEEE
Confidence 45678888899998776532 2222223455566777799999997655 45555 4459999999999999999
Q ss_pred cCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHH
Q 046230 191 DSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEII 263 (489)
Q Consensus 191 ~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~ 263 (489)
|...|.+..-++...|.++..+|+. +++...+.|++-..++ ....++.++..+-+..|.+.+-+.+.
T Consensus 106 D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~------g~~~~lallTh~Dg~YGNl~Dakkva 179 (382)
T COG1103 106 DSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEG------GDPPALALLTHVDGEYGNLADAKKVA 179 (382)
T ss_pred cCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhcc------CCCceEEEEeccCCCcCCchhhHHHH
Confidence 9999999999999999999999865 6788888887765543 12345555556666778899999999
Q ss_pred HHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhC-CCc---
Q 046230 264 AICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTC-PAH--- 337 (489)
Q Consensus 264 ~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~-~~~--- 337 (489)
++|++||+.+++..+|+.|-+--.++ . ..+|++++|-+|+++..| |.+..+.++.+.+-..+ ..+
T Consensus 180 ~ic~e~gvPlllN~AYt~Grmpvs~k------e---~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~K 250 (382)
T COG1103 180 KICREYGVPLLLNCAYTVGRMPVSGK------E---IGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKK 250 (382)
T ss_pred HHHHHcCCceEeecceeecccccccc------c---cCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccc
Confidence 99999999999999999775422221 1 234999999999998878 99999999988765544 211
Q ss_pred ---ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCeEEEEeCCCC----
Q 046230 338 ---LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPA---- 409 (489)
Q Consensus 338 ---~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~---- 409 (489)
.++++.--......++++-.+. +.-.+.+.--++.++|.+.|+++| +...+...-.---+.+..|.
T Consensus 251 EvellGCT~rGapivTlmASfP~V~------eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eI 324 (382)
T COG1103 251 EVELLGCTVRGAPIVTLMASFPHVV------ERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEI 324 (382)
T ss_pred eeeeecccccCchHHHHHhcCHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHH
Confidence 1222221222333455554442 334445555678899999999984 66554422111011121111
Q ss_pred ------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 ------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..--+.++|.++||.-.. |....++.++. ..++.|+++.+++++++++++.
T Consensus 325 akk~~r~gyFlY~ELK~RgI~GI~------~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 325 AKKHKRKGYFLYEELKKRGIHGIQ------PGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHhCcCCceeeHHHHHhcCccccc------cCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHhc
Confidence 111467889999987652 33346788887 5899999999999999998764
No 287
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=2.1e-19 Score=181.45 Aligned_cols=283 Identities=16% Similarity=0.159 Sum_probs=201.6
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++.++++.|.+.++++++|+.++..++. +.++||.|++..+.|+++... +...|++++.++..|+++++
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le 125 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVK 125 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHH
Confidence 4468999999999999999999999987765554 679999999999999876543 34569999999988999998
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|+++++.+++|.+.++++|.++|+++|+++|+|++|..+... + .+.. .
T Consensus 126 ~~i~~-------------~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~---~----~l~~---g 182 (378)
T TIGR01329 126 AALGP-------------KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC---N----PLEL---G 182 (378)
T ss_pred HhcCc-------------CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---C----hhhc---C
Confidence 88753 4557888999999999999999999999999999999998633221 1 1111 3
Q ss_pred ccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+|+++.|++|.++++ ||+++. ++++.+.++..... .+..++|..+..+...|+ ....++++..+
T Consensus 183 ~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~--~G~~~~~~~a~l~~~~l~---------tl~~R~e~~~~ 251 (378)
T TIGR01329 183 ADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNS--TGSGLAPFDCWLLLRGIK---------TLAIRIEKQQE 251 (378)
T ss_pred CcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHh--cCCcCCHHHHHHHHccCC---------CHHHHHHHHHH
Confidence 499999999999754 488876 45665666543321 234477777766555555 34677888888
Q ss_pred HHHHHHHHHHhCC-C-ee-e------------C---CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC------CC
Q 046230 377 NSNFFRSELQKMG-F-EV-L------------G---DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF------PA 432 (489)
Q Consensus 377 ~~~~l~~~L~~~g-~-~v-~------------~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------p~ 432 (489)
+...+.+.|++.. + .+ + . ...+.++.+.+.......+|.+.|..-++.+...+. |.
T Consensus 252 na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~ 331 (378)
T TIGR01329 252 NARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPC 331 (378)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCC
Confidence 8888888888651 1 11 0 0 123567888874333366888888655666554222 21
Q ss_pred c------C--------CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 433 T------P--------LLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 433 ~------~--------~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
. + ...+.+||++.. ||.+.+++-|+++++.+
T Consensus 332 ~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 332 FMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVTA 376 (378)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhc
Confidence 1 0 124689999964 56777777777777654
No 288
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=2.1e-18 Score=174.03 Aligned_cols=306 Identities=15% Similarity=0.143 Sum_probs=204.9
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
++..+++.+.+.. +.- +|..+...++++.++++++.+..+++++|+++...++.++ .++||.|+++.++|.
T Consensus 11 ~~e~~a~~~~~~~-~~~-------~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~ 82 (376)
T TIGR02379 11 GQELEYIAEAISE-GKL-------SGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHHHHHc-CCc-------cCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 3446677776654 211 1235567899999999999988888888999887777776 789999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...+...|++++.++.+ |++++++++.. +.+++ +. .+++|...++++|.++|++||
T Consensus 83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~------------~tk~I-ip---~~~~G~~~d~~~I~~la~~~~ 146 (376)
T TIGR02379 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH------------RTKAI-VP---VHYAGVACDMDTIMALANKHQ 146 (376)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc------------CceEE-EE---eCCCCCccCHHHHHHHHHHCC
Confidence 9998888899999988754 56777776643 24444 32 235788999999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCC--cceEEEeC-HHHHHHHHhhCC-C--------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGS--CGGYIAGS-KELIQYLKYTCP-A-------- 336 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~--~GG~i~~~-~~~~~~l~~~~~-~-------- 336 (489)
++||+|++|++|.. ..|+.+ |.-- |+.+.||+ |.+.. .||+++.+ +++.+.++.... +
T Consensus 147 i~vIeDaa~~~g~~-~~~~~~----g~~~---~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 218 (376)
T TIGR02379 147 LFVIEDAAQGVMST-YKGRAL----GSIG---HLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFR 218 (376)
T ss_pred CEEEEECccccCCc-cCCccc----CCCC---CEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccc
Confidence 99999999996542 223221 1111 55533332 76743 46887665 788877764321 0
Q ss_pred ----------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC----Ceee--CCCC---
Q 046230 337 ----------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG----FEVL--GDND--- 397 (489)
Q Consensus 337 ----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~v~--~~~~--- 397 (489)
..+...++.+.++.+++.|+.+ ++..++-+++.++..+.|..+. ..+. .+..
T Consensus 219 ~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l---------~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 289 (376)
T TIGR02379 219 GEVDKYTWRDIGSSYLPSELQAAYLWAQLEQA---------DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHN 289 (376)
T ss_pred cCCCcceeeeecccCCccHHHHHHHHHHHHHh---------HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeee
Confidence 0112246677777777888865 5566666677777777776542 1221 1111
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc--CC-----------------CCCeEEEeecCCCCHHHHHHHHH
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT--PL-----------------LLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~-----------------~~~~iRi~~~~~~t~edid~~l~ 458 (489)
..++++.+.......++.+.|.++||.+.+...|.. |. ....+.+-+...+|++|++++++
T Consensus 290 ~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~ 369 (376)
T TIGR02379 290 AHMFYIKLKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQ 369 (376)
T ss_pred eEEEEEEECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHH
Confidence 123445554434578999999999998774211211 10 02345565556799999999999
Q ss_pred HHHHHH
Q 046230 459 VISRVG 464 (489)
Q Consensus 459 ~l~~~~ 464 (489)
+|++++
T Consensus 370 ~i~~~~ 375 (376)
T TIGR02379 370 TICDYL 375 (376)
T ss_pred HHHHHh
Confidence 998764
No 289
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=2.1e-18 Score=173.43 Aligned_cols=289 Identities=16% Similarity=0.109 Sum_probs=206.7
Q ss_pred cchhHHHHHHHHHHHhCCC--C--EEEeCccHHHHHHhHhhh--cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--
Q 046230 144 TLMVHNELEECVARFVGKP--A--AIVFGMGYVTNSAILPVL--MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-- 215 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a~~~~~~al--~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-- 215 (489)
+.....++.+.+|+++|.+ + .++.++||++|..++.+. ..+++.|++....|.++...++..|...+.++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~ 142 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN 142 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCC
Confidence 4567778888999999864 3 255567789985444433 2467899999999999999998888766665543
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC---cEEEEEcccccccccCCCC
Q 046230 216 ---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK---AYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 216 ---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~---~~li~DEa~s~g~~g~~G~ 289 (489)
|+++|++.|++. ..++++|++....+++|.+.|+++|.++|++|| +++++|.+|+.+.+-.. +
T Consensus 143 g~id~~~L~~~i~~~----------~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~ 211 (380)
T PRK02769 143 GEIDYDDLISKIKEN----------KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV-N 211 (380)
T ss_pred CcCcHHHHHHHHHhC----------CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeeccc-C
Confidence 889999988763 124567777778889999999999999999998 79999999994433111 0
Q ss_pred ccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCC-----CcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCP-----AHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~-----~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
.. ..++... ++|.+..+.+|.++ +.| |++..+++..+.+..... ..+...+-+....+++.++|+.+
T Consensus 212 ~~-~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l---- 285 (380)
T PRK02769 212 NP-PPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL---- 285 (380)
T ss_pred cc-ccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH----
Confidence 00 1233322 57999999999987 556 888888777665532111 11122233445677788888877
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEE
Q 046230 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARI 442 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi 442 (489)
+....++..++..++.+++.++|++.|+++...+.+.++.+. .+. .++. +|..+.+. .+.+|+
T Consensus 286 g~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~--~~~--~~~~-----~~w~l~~~--------~~~~hi 348 (380)
T PRK02769 286 GSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFP--CPS--ERIW-----KKWHLATS--------GNQAHI 348 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEc--CCC--HHHH-----hCeeEccc--------CCEEEE
Confidence 333567888999999999999999999998877777665543 232 1221 56666521 247999
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHH
Q 046230 443 CISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 443 ~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
++...+|++.+|.+++.|.+....
T Consensus 349 ~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 349 ITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred EECCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999887653
No 290
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=1.8e-18 Score=172.58 Aligned_cols=320 Identities=14% Similarity=0.065 Sum_probs=215.7
Q ss_pred ccCCCCC---CccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-C---EEEeCccHHHHHHhHhhh
Q 046230 110 YLGFAAS---DEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP-A---AIVFGMGYVTNSAILPVL 181 (489)
Q Consensus 110 ~lg~~~~---~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~---~i~~~sG~~a~~~~~~al 181 (489)
++|++.+ .+.+.+++.+.+.+ +|.....+...........++.+.+|+++|.+ + .++.++||++|..++.+.
T Consensus 26 ~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~a 105 (374)
T PLN03032 26 HFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVG 105 (374)
T ss_pred ccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHH
Confidence 3555554 33456666665543 34332222222235677788889999999874 2 266778899995555543
Q ss_pred c--CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 182 M--RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 182 ~--~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
. .++..|+++...|.|+...++..|..+..++.+ |+++|++.|++. ...+.+|++....+++|
T Consensus 106 r~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~----------~~~~~lvv~tagtt~tG 175 (374)
T PLN03032 106 REVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKN----------RDKPAILNVNIGTTVKG 175 (374)
T ss_pred HHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHc----------CCCCEEEEEEecCcCCc
Confidence 3 345689999999999999999988776666544 899999999752 12345566656678899
Q ss_pred CCCChHHHHHHHHHcC-----cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHH
Q 046230 255 ELCKFPEIIAICKKYK-----AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELI 327 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~-----~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~ 327 (489)
.+.|+++|.++|++|| +++++|.+++.+.+-.... ...++.. ..+|.+..+.+|.+| +.| |+++.+++.+
T Consensus 176 ~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~--~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~ 252 (374)
T PLN03032 176 AVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR--APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHV 252 (374)
T ss_pred cCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC--CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhh
Confidence 9999999999999996 5999999998443221111 0112222 246888889999998 667 8888887776
Q ss_pred HHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEE
Q 046230 328 QYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMP 402 (489)
Q Consensus 328 ~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~ 402 (489)
+.+...... .+...+-+....+.+.++|..+ +.+...+..++..++++++.+.|++.++.+...+.+.++.
T Consensus 253 ~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~----G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~ 328 (374)
T PLN03032 253 KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRK----GYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVV 328 (374)
T ss_pred HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEE
Confidence 655332111 1111122334566777788776 4556778899999999999999999999876666665543
Q ss_pred EEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 403 IMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
+ ..+.. . . ..+|..+.+ ..+.+|+++...+|++.+|++++.|.+
T Consensus 329 f--~~~~~-~----~-~~~~w~l~~--------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 329 F--ERPMD-E----A-FIKKWQLAC--------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred E--cCCCc-H----h-Hhheeeecc--------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 3 33321 1 1 225665552 124799999888999999999988865
No 291
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=3.4e-18 Score=173.04 Aligned_cols=305 Identities=14% Similarity=0.119 Sum_probs=204.8
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCchH
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHNS 197 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~~ 197 (489)
+-.+++.+.+.. +. .+|..+..+++++.++++++.+.++++++|+++...++.++ .++||.|+++.++|.+
T Consensus 12 ~~~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~ 83 (375)
T PRK11706 12 TELDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS 83 (375)
T ss_pred HHHHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH
Confidence 335566666654 21 12345667899999999999998888899999986655544 6899999999999999
Q ss_pred HHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 046230 198 IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKA 271 (489)
Q Consensus 198 ~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~ 271 (489)
+...+...|++++.++.+ |++++++.+.. +.++++++ +++|...++++|.++|++||+
T Consensus 84 ~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~------------~tk~i~~~----~~~G~~~~~~~i~~la~~~~i 147 (375)
T PRK11706 84 TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP------------KTRAIVPV----HYAGVACEMDTIMALAKKHNL 147 (375)
T ss_pred HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC------------CCeEEEEe----CCCCCccCHHHHHHHHHHcCC
Confidence 999999999999888643 67888877753 34555544 357888999999999999999
Q ss_pred EEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCCc-ce-EEEeCHHHHHHHHhhCCC-----------
Q 046230 272 YIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGSC-GG-YIAGSKELIQYLKYTCPA----------- 336 (489)
Q Consensus 272 ~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~~-GG-~i~~~~~~~~~l~~~~~~----------- 336 (489)
++|+|++|++|.. ..|+.... + - |+-+.||+ |.++.. || +++.++++.+.++.....
T Consensus 148 ~vIeD~a~a~g~~-~~~~~~g~-~---~---~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 219 (375)
T PRK11706 148 FVVEDAAQGVMST-YKGRALGT-I---G---HIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQ 219 (375)
T ss_pred EEEEECccccccc-cCCeeeec-C---c---CEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC
Confidence 9999999996642 12322211 1 1 55533554 999542 35 455567887755432210
Q ss_pred --------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeeeC-CC----CCC
Q 046230 337 --------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG----FEVLG-DN----DSP 399 (489)
Q Consensus 337 --------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~v~~-~~----~~~ 399 (489)
..+..-++.+.++.+++.|+.+ ++..++-+++.+++++.|..+. +.... +. ..+
T Consensus 220 ~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l---------~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 290 (375)
T PRK11706 220 VDKYTWVDIGSSYLPSELQAAYLWAQLEAA---------DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAH 290 (375)
T ss_pred CCcceeeecccccCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeE
Confidence 0111234667777777777755 5667777778888888887652 22211 11 133
Q ss_pred eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc---------------C----CCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 400 VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT---------------P----LLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~---------------~----~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
++++.+.......++.+.|.++||.+.....|.. | .....+-+-+....|++|++.+++.|
T Consensus 291 ~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 291 MFYIKLRDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTI 370 (375)
T ss_pred EEEEEECCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHH
Confidence 5666665555678999999999998763211111 0 01233445455568999999999999
Q ss_pred HHHH
Q 046230 461 SRVG 464 (489)
Q Consensus 461 ~~~~ 464 (489)
++++
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 8764
No 292
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.5e-18 Score=176.33 Aligned_cols=210 Identities=18% Similarity=0.183 Sum_probs=164.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.++++++++|++++..++.++.++||.|++..+.|+.... .....|..+..++..|+++|
T Consensus 59 ~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 138 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSL 138 (405)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 44568899999999999999999999988888888899999999999999987443 23445778888888888888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|+++++.+++|.+.++++|.++|+++|+++|+||+|..+..- + ... .
T Consensus 139 ~~~i~~-------------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~---~----pl~---~ 195 (405)
T PRK08776 139 ADALAQ-------------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ---K----PLE---F 195 (405)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC---C----ccc---c
Confidence 887753 3446777888999999999999999999999999999999743210 1 111 2
Q ss_pred CccEEEcccccccCCcc----eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..|+++.|.+|.++++| |+++. ++++.+.+...... .+..++|..+.++...++. .+.++++..
T Consensus 196 gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~--~g~~~s~~~a~l~~~gl~t---------l~~r~~~~~ 264 (405)
T PRK08776 196 GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANA--LGLTGSPFDAFLTLRGLRT---------LDARLRVHQ 264 (405)
T ss_pred cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhCc---------HHHHHHHHH
Confidence 34899999999997653 77765 57777777543332 2234788888888877764 477899999
Q ss_pred HHHHHHHHHHHhC
Q 046230 376 ENSNFFRSELQKM 388 (489)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (489)
+|...+.+.|++.
T Consensus 265 ~na~~la~~L~~~ 277 (405)
T PRK08776 265 ENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999876
No 293
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=5.7e-19 Score=179.08 Aligned_cols=284 Identities=17% Similarity=0.144 Sum_probs=196.9
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
++...+|++++|++.|.+.++++++|++++..++.+++++||.|+++.+.|+.+.. .+...|+++..++..+.+++
T Consensus 64 ~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l 143 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGI 143 (394)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHH
Confidence 34458999999999999988899999999988888899999999999999998663 34567889888877777777
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|+++++.++.|...++++|.++|+++|+++|+|++|+.+.+-+ ++. .
T Consensus 144 ~~~i~~-------------~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~---------~l~-~ 200 (394)
T PRK07050 144 ADLIQP-------------NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFK---------PFE-H 200 (394)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccC---------HHH-c
Confidence 776643 34567889999999999999999999999999999999998553311 111 1
Q ss_pred CccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
+.||++.|++|.+++. ||++++ ++++++.++..... .+.+++|..+..++..|+- ...++++..
T Consensus 201 GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~--~G~~~~~~~a~l~lr~l~t---------l~~Rl~~~~ 269 (394)
T PRK07050 201 GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMR--LGIGVSADDCSLVLRGLPS---------LQVRLAAHD 269 (394)
T ss_pred CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcCCCc---------HHHHHHHHH
Confidence 3489999999999643 365554 67888877654432 2445777776655555443 355778888
Q ss_pred HHHHHHHHHHHhC-CCe-ee-C---------------CCCCCeEEEEeCCC---CcHHHHHHHHhhCCceEEeecC----
Q 046230 376 ENSNFFRSELQKM-GFE-VL-G---------------DNDSPVMPIMLYNP---AKIPAFSRECLRQNVAVVTVAF---- 430 (489)
Q Consensus 376 ~~~~~l~~~L~~~-g~~-v~-~---------------~~~~~~~~~~~~~~---~~~~~~~~~l~~~Gi~v~~~~~---- 430 (489)
+++..+.+.|++. ++. ++ + ...+.++.+.+... ....+|.+.|...++.+.-.+.
T Consensus 270 ~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~ 349 (394)
T PRK07050 270 RSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLA 349 (394)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceE
Confidence 8888888888876 221 11 0 01244566666432 3355677777665544332111
Q ss_pred -CCc---------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 431 -PAT---------PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 431 -p~~---------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
|.. +...+.|||++.. ||.+.+++-|+++++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 350 MPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred eeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 111 1223689999975 4455555555555543
No 294
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-18 Score=166.65 Aligned_cols=338 Identities=20% Similarity=0.254 Sum_probs=227.8
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHH----HHHHHHhCCCCE-EEeCccHH
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELE----ECVARFVGKPAA-IVFGMGYV 172 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i~~~sG~~ 172 (489)
+..|++ .|-||. ++.|.+|.-..+.+ |..+..+-|...|+ +..+++| ++..+++|.+.+ +--.||+.
T Consensus 26 ~~~ieLIASEN~~-----S~aV~~A~gS~ltnKYAEGyPgkRyYgGc-e~VD~vE~laierak~LFga~~anVQPhSGs~ 99 (413)
T COG0112 26 REHIELIASENFT-----SPAVMEAQGSDLTNKYAEGYPGKRYYGGC-EYVDEVEELAIERAKKLFGAEYANVQPHSGSQ 99 (413)
T ss_pred hhceeeeeccccC-----CHHHHHHHhhhhhhccccCCCCccccCCC-eeHHHHHHHHHHHHHHHhCCCccccCCCCchH
Confidence 356666 455543 36677777776654 88777777766554 3333333 445567888754 44589999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHHH---HHHhcCCe--EEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIVN---GARGSGAT--IRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~~---~~~~~g~~--~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
||.++..++.+|||.|+.-...|+.... ....+|.. .+.++.+ |.|++++...+. +.+
T Consensus 100 AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~-----------kPK 168 (413)
T COG0112 100 ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV-----------KPK 168 (413)
T ss_pred HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh-----------CCC
Confidence 9999999999999999987777765432 22333433 2333333 899999998884 345
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i 320 (489)
.+|.--+.|+ ...|+++++++|++.|++|++|-+|-.|.. ..|.. -+-- ...|++++|.+|+| |+.||.|
T Consensus 169 ~ii~G~SaY~---r~id~~~~reIad~VGA~L~~DmAHiaGLV-A~G~~----p~P~-~~AdvVTtTTHKTlrGPrGG~I 239 (413)
T COG0112 169 LIIAGGSAYS---RPIDFKRFREIADEVGAYLMVDMAHVAGLI-AGGVH----PNPL-PHADVVTTTTHKTLRGPRGGII 239 (413)
T ss_pred EEEECccccc---cccCHHHHHHHHHHhCceEEehHHHHHHHH-hcccC----CCCC-CccceEeCCcccCCCCCCceEE
Confidence 4444445554 357899999999999999999999975533 22221 1111 23699999999999 6778999
Q ss_pred EeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CCCC
Q 046230 321 AGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG-DNDS 398 (489)
Q Consensus 321 ~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~-~~~~ 398 (489)
.+++ ++.+.+...-.+..-+.+..-..++-+.+.-+.+ ..+.++..+++.+|++.|.+.|.+.|+.+++ ..++
T Consensus 240 l~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal-----~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdn 314 (413)
T COG0112 240 LTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEAL-----EPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDN 314 (413)
T ss_pred EeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHc-----ChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccc
Confidence 9985 8888887644433332222222333344433433 2355888999999999999999999999864 4456
Q ss_pred CeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCCc---CCCCCeEEEeecCC----CCHHHHHHHHHHHHHHHHHhC
Q 046230 399 PVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPAT---PLLLARARICISAS----HTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 399 ~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~~---~~~~~~iRi~~~~~----~t~edid~~l~~l~~~~~~~~ 468 (489)
+++-+.+... ....+....|-+.||.+.-..-|.. |...+.|||..++. ..++|++++.+-|.++++...
T Consensus 315 Hl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 315 HLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred eEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 7776766632 2445555555566999987444443 44567899987654 456899999999988887654
No 295
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6.2e-19 Score=177.50 Aligned_cols=209 Identities=15% Similarity=0.192 Sum_probs=167.6
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|+++||++.+.+++++++||++|+..++.++.++||.|++..+.|+++..- ....|.++..++..+.+.++
T Consensus 61 pt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~ 140 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIR 140 (394)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHH
Confidence 34579999999999888899999999999888888999999999999999777642 23467888778777777888
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|++|.+.|++|.+.++++|+++|+++|+++++|++|+.+.. +..+. .+
T Consensus 141 ~~l~~-------------~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-------~~Pl~---~G 197 (394)
T PRK09028 141 ELIRP-------------NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-------SRPFE---MG 197 (394)
T ss_pred HhcCc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-------CCccc---cC
Confidence 77643 355788899999999999999999999999999999999984321 11121 24
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
+|+++.|.+|++++.| |+++.++++.+.++.... ..+..++|..+..++..|+.+ .-++++..++
T Consensus 198 aDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~~rgl~TL---------~lR~~~~~~n 266 (394)
T PRK09028 198 VDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSY--LMGQCTSPDDVYLAMRGLRTL---------GVRLAQHEKN 266 (394)
T ss_pred ceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcH---------HHHHHHHHHH
Confidence 5999999999998775 888778877776654332 235569999999888887754 6788999999
Q ss_pred HHHHHHHHHhC
Q 046230 378 SNFFRSELQKM 388 (489)
Q Consensus 378 ~~~l~~~L~~~ 388 (489)
+..+.+.|++.
T Consensus 267 a~~la~~L~~~ 277 (394)
T PRK09028 267 ALKVANWLATR 277 (394)
T ss_pred HHHHHHHHhcC
Confidence 99999999886
No 296
>PRK07049 methionine gamma-lyase; Validated
Probab=99.84 E-value=9.3e-19 Score=179.09 Aligned_cols=214 Identities=16% Similarity=0.199 Sum_probs=168.6
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEec-CCCHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQ-HNTPSHL 220 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~-~~d~~~L 220 (489)
+....|++.||++.+.++++++++|++++..++.+++++||.|+++.+.|+.+...+ ...|++++.++ ..|.+++
T Consensus 83 Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l 162 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAI 162 (427)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHH
Confidence 445899999999999999999999999999999999999999999999999876543 45688766654 4578888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH------cCcEEEEEcccccccccCCCCccccc
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK------YKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~------~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
++.+.+.+.. .++.+|+++++.||+|.+.++++|.+++++ +++++|+||++. ..-. ...
T Consensus 163 ~~~l~~~~~~--------~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~--~~~~-----~~p 227 (427)
T PRK07049 163 GAAAEAAAAK--------GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL--GPVF-----QKP 227 (427)
T ss_pred HHHHHhhccC--------CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc--cccc-----CCc
Confidence 8877653211 234577888999999999999999999988 899999999975 2111 001
Q ss_pred cCCCCCCccEEEcccccccCC-cc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGS-CG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~-~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
.. .+.||++.||||.+|+ +| ||+++++++++.+...... ++..++|..+.+++..|+.+ ..+
T Consensus 228 l~---~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~--~g~~ls~~~a~l~~r~L~tl---------~~R 293 (427)
T PRK07049 228 LE---HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSA--IGTQLDPHSCWMLGRSLETL---------VLR 293 (427)
T ss_pred cc---cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcCCChH---------HHH
Confidence 11 2348999999999984 45 9999999999888765443 34568999998888887754 567
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 046230 371 LARIRENSNFFRSELQKM 388 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~ 388 (489)
+++..++...+.+.|++.
T Consensus 294 ~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 294 MERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 778899999999999987
No 297
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=9.2e-19 Score=175.77 Aligned_cols=210 Identities=15% Similarity=0.210 Sum_probs=172.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
++-...||++||++-|.+.+++|+||+.|+.+++.++.++||.|+++...|+++...+ +..|.++..++..|.+++
T Consensus 61 nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 4556889999999999999999999999998888888999999999988898876554 446899999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC--cEEEEEcccccccccCCCCccccccCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK--AYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~--~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
+++|+. ++.+|++|.+.|+.|.+.|+++|+++|+++| +++++|.+++.+.+ +...
T Consensus 141 ~~~l~~-------------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----------~~pl 197 (395)
T PRK08114 141 AKLIQP-------------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----------FKAL 197 (395)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----------cCHH
Confidence 988864 4568899999999999999999999999985 99999999985432 2222
Q ss_pred CCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 299 TADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
..++||++.|.+|.+++.| |.++.+++..+.++.... ..+..++|..+..++..|+.+ .-++++.
T Consensus 198 ~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~~rgl~TL---------~lR~~~~ 266 (395)
T PRK08114 198 DFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSY--LMGQMVDADTAYMTSRGLRTL---------GVRLRQH 266 (395)
T ss_pred HcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHH--hccCCCCHHHHHHHHcCCCcH---------HHHHHHH
Confidence 2345999999999998765 877878877666654322 245668999998888877754 6788999
Q ss_pred HHHHHHHHHHHHhC
Q 046230 375 RENSNFFRSELQKM 388 (489)
Q Consensus 375 ~~~~~~l~~~L~~~ 388 (489)
.+++..+.+.|++.
T Consensus 267 ~~na~~va~~L~~h 280 (395)
T PRK08114 267 EESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999876
No 298
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=9.1e-18 Score=165.16 Aligned_cols=306 Identities=20% Similarity=0.234 Sum_probs=215.4
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
.+..+++.+.+++.-... .+...++|+.+|+++|...++.++|||.|+..+++++ .++||.|+++..++.
T Consensus 15 ~~e~~~v~~vl~sg~i~~---------G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tfv 85 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG---------GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFV 85 (374)
T ss_pred hHHHHHHHHHHHcCCeec---------ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchH
Confidence 345666666666522111 2344899999999999999999999999998777765 599999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...+...|++++.++.+ |++.+|++|.+ ..+++|.+ .. .|..+++++|.++|++||
T Consensus 86 ATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~------------~tKAIipV-hl---~G~~~dm~~i~~la~~~~ 149 (374)
T COG0399 86 ATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP------------RTKAIIPV-HL---AGQPCDMDAIMALAKRHG 149 (374)
T ss_pred HHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc------------CCeEEEEe-hh---ccCCCCHHHHHHHHHHcC
Confidence 9999999999999988765 89999999876 35555544 33 367889999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCCc-ceEEEeC-HHHHHHHHhh---CCC-------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGSC-GGYIAGS-KELIQYLKYT---CPA------- 336 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~~-GG~i~~~-~~~~~~l~~~---~~~------- 336 (489)
++||.|.+|++|.. ..|+.+. -+| |+.+.|| +|.++.. ||+++++ +++.+.++.. ...
T Consensus 150 l~vIEDaAqa~Ga~-y~gk~vG-t~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y 221 (374)
T COG0399 150 LPVIEDAAQAHGAT-YKGKKVG-SFG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKY 221 (374)
T ss_pred CeEEEEcchhccCe-ecCcccc-ccc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccc
Confidence 99999999997754 2333222 122 5555566 5888653 5888875 6676665432 211
Q ss_pred ----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCC-----CeEEEEeC
Q 046230 337 ----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDS-----PVMPIMLY 406 (489)
Q Consensus 337 ----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~-----~~~~~~~~ 406 (489)
..|...++.+.+|.++.-|+.+ ++..++-+++.++..+.|+++ ++.+...... ...++.+.
T Consensus 222 ~~~~~G~N~rm~~iqAAigl~QL~~l---------~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~ 292 (374)
T COG0399 222 LHEELGYNYRLTEIQAAIGLAQLERL---------DEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVD 292 (374)
T ss_pred eeeecccccCHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEec
Confidence 1122347778888888888865 667777777888888889887 3333222221 23344444
Q ss_pred CC-CcHHHHHHHHhhCCceEEeecCCC----------------cC----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NP-AKIPAFSRECLRQNVAVVTVAFPA----------------TP----LLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~-~~~~~~~~~l~~~Gi~v~~~~~p~----------------~~----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.. .....+.+.|.++||.......|. .| .....+.+-+...+|++|+++++++|.+++.
T Consensus 293 ~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 293 EEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred CCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 43 556789999999977632211110 01 1134677777778999999999999998875
No 299
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.3e-18 Score=177.77 Aligned_cols=285 Identities=19% Similarity=0.224 Sum_probs=195.6
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH----hcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~Le 221 (489)
+...+|+++||++.|.+.+++++||++++..++.++.++||.|+++.+.|+.....+. ..|..+..++.+|+++++
T Consensus 58 pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le 137 (425)
T PRK06084 58 PTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALE 137 (425)
T ss_pred chHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHH
Confidence 4457999999999999999999999999998999999999999999888886554433 246777778888999999
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.+++ ++.+|+++++.+++|.+.++++|.++|+++|+++|+|++|+.+.+. + .+. ..
T Consensus 138 ~ai~~-------------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~---~----p~~---~g 194 (425)
T PRK06084 138 ALIDE-------------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC---R----PFE---HG 194 (425)
T ss_pred HHhcc-------------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC---C----hhh---cC
Confidence 98864 3346777999999999999999999999999999999999854321 1 111 23
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHH--HHH------HHh-------------h-----------CCCcccccCCCH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKEL--IQY------LKY-------------T-----------CPAHLYATSISP 345 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~--~~~------l~~-------------~-----------~~~~~~~~~~~p 345 (489)
+||++.|++|.+++.| |+++.++.+ .+. ++. . .....++..++|
T Consensus 195 aDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~ 274 (425)
T PRK06084 195 ADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSP 274 (425)
T ss_pred CCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCH
Confidence 4999999999998765 666653321 000 000 0 000123456899
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ce-e-eC---------------CC-CCCeEEEEeC
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FE-V-LG---------------DN-DSPVMPIMLY 406 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-v-~~---------------~~-~~~~~~~~~~ 406 (489)
..++.++..|+.+ +.++++..++...+.+.|++.. +. | ++ .. .+.++.+.+.
T Consensus 275 ~~a~l~lrgl~tl---------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~ 345 (425)
T PRK06084 275 FNAFLILQGLETL---------ALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIK 345 (425)
T ss_pred HHHHHHHcCcCcH---------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEec
Confidence 9888888888755 7789999999999999999872 21 1 11 01 2456666664
Q ss_pred CC-CcHHHHHHHHhhCCceEEe------ecCCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NP-AKIPAFSRECLRQNVAVVT------VAFPAT--------------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~-~~~~~~~~~l~~~Gi~v~~------~~~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.. ....+|.+.|.--.+.+.- +..|.. ....+.+||++.. ||.|.+++.|+++++
T Consensus 346 ~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dLi~dl~~Al~ 421 (425)
T PRK06084 346 GGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDIIADLAQALD 421 (425)
T ss_pred CCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 32 2233455544321211110 111211 1124689999964 566777777777765
Q ss_pred H
Q 046230 466 L 466 (489)
Q Consensus 466 ~ 466 (489)
.
T Consensus 422 ~ 422 (425)
T PRK06084 422 A 422 (425)
T ss_pred h
Confidence 4
No 300
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.8e-18 Score=175.50 Aligned_cols=281 Identities=15% Similarity=0.193 Sum_probs=194.8
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|++.|.+.+++++||+.++..++. +.++||.|++..+.|++... .++..|++++.++..|++++
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 131 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEV 131 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 45568999999999999899999999998866665 67889999999998886443 34457999999988888888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+++ ++.+|+++.+.+++|.+.++++|.++|+++|+++|+|++|+.+.... ... .
T Consensus 132 ~~~l~~-------------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-------~~~---~ 188 (390)
T PRK08064 132 AQNIKP-------------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-------PLD---L 188 (390)
T ss_pred HHhcCC-------------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-------chh---h
Confidence 887753 34577889999999999999999999999999999999987332111 111 2
Q ss_pred CccEEEcccccccCCcc----eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
++|+++.|++|.+++++ |+++. ++++++.++..... ++...+|..+..++..++ ....++++..
T Consensus 189 g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~--~g~~~~~~~a~l~~~gl~---------tl~~R~~~~~ 257 (390)
T PRK08064 189 GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNS--FGAVLGVQDCWLVLRGLK---------TLHVRLEHSS 257 (390)
T ss_pred CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccC---------cHHHHHHHHH
Confidence 34899999999996432 76655 56788887765543 344477776665555444 3467788888
Q ss_pred HHHHHHHHHHHhCC---------Ce------eeC---CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe--ec------
Q 046230 376 ENSNFFRSELQKMG---------FE------VLG---DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT--VA------ 429 (489)
Q Consensus 376 ~~~~~l~~~L~~~g---------~~------v~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~--~~------ 429 (489)
++...+.+.|++.+ ++ +.. ...+.++.+.+.. ..++.+.+-..++.... .|
T Consensus 258 ~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~---~~~~~~f~~~l~l~~~~~s~G~~~sl~ 334 (390)
T PRK08064 258 ETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS---EEAVRQFVSHVKLPVFAVSLGAVESIL 334 (390)
T ss_pred HHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHhCCcceEcccCCCCccee
Confidence 88888888888752 11 100 1235577777743 22333333333653211 11
Q ss_pred -CCC------cC--------CCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 430 -FPA------TP--------LLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 430 -~p~------~~--------~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.|. .+ ...+.+|+++....+++.|+.+.++|+++
T Consensus 335 ~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 335 SYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 111 01 22578999998877777777777777653
No 301
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.2e-18 Score=173.75 Aligned_cols=209 Identities=15% Similarity=0.176 Sum_probs=165.3
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~Le 221 (489)
+-...|++++|++.|.+..+++++|++++..++.++.++||.|+++.+.|++....+ ...|.++..++..|+++++
T Consensus 53 pt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~ 132 (388)
T PRK08861 53 PNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALD 132 (388)
T ss_pred chHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 446899999999999988888899999998888888999999999999998755432 2346778778777888888
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+++.+ ++.+|+++.+.|++|.+.++++|.++|+++|+++|+||+|..+.+.. .+.+ +
T Consensus 133 ~~i~~-------------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~-------pl~~---G 189 (388)
T PRK08861 133 AALAK-------------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK-------PLEL---G 189 (388)
T ss_pred HhcCc-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC-------Cccc---C
Confidence 87753 34577788999999999999999999999999999999998543311 1112 3
Q ss_pred ccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+|+++.|++|.++++ ||++++ ++++.+.++.... ..+..++|..+..++..|+-+ .-++++..+
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~--~~G~~~~p~~a~l~~rgl~Tl---------~lR~~~~~~ 258 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGN--CIGATGTPFDSYMTLRGIRTL---------GARMRVHEE 258 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHh--ccCCCCChHHHHHHHhcCCCH---------HHHHHHHHH
Confidence 499999999999764 388877 4567666654433 245668999988888877754 678888899
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
++..+.+.|++.
T Consensus 259 ~a~~~a~~L~~~ 270 (388)
T PRK08861 259 SAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHhC
Confidence 999999999876
No 302
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.5e-18 Score=173.78 Aligned_cols=210 Identities=13% Similarity=0.171 Sum_probs=162.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH----hcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~L 220 (489)
.+...+|+++||++.|.++.+++++|++++..++.++.++||.|++..+.|++....+. ..+..+..++..|++++
T Consensus 51 ~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l 130 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQAL 130 (386)
T ss_pred CccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHH
Confidence 34468999999999998888888999998888888899999999999999986543222 23446666666688888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+++ ++.+|+++.+.|++|.+.++++|.++|+++|+++|+||+|..+... + .+. .
T Consensus 131 ~~~l~~-------------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~---~----pl~---~ 187 (386)
T PRK08045 131 RAALAE-------------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ---N----PLA---L 187 (386)
T ss_pred HHhccc-------------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---C----chh---h
Confidence 887753 3446777899999999999999999999999999999999743221 1 111 2
Q ss_pred CccEEEcccccccCCcc----eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
.+|+++.|++|.+++.+ |+++. ++++++.++..... .+..++|..+..++..|+.+ ..++++..
T Consensus 188 gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~--~g~~~~p~~~~l~~rgl~tl---------~~R~~~~~ 256 (386)
T PRK08045 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN--IGVTGGAFDSYLLLRGLRTL---------VPRMELAQ 256 (386)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhccH---------HHHHHHHH
Confidence 33899999999997433 77765 57787777644332 34458999998888888754 77888999
Q ss_pred HHHHHHHHHHHhC
Q 046230 376 ENSNFFRSELQKM 388 (489)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (489)
++...+.+.|++.
T Consensus 257 ~na~~la~~L~~~ 269 (386)
T PRK08045 257 RNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999876
No 303
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=5.6e-18 Score=170.75 Aligned_cols=302 Identities=21% Similarity=0.188 Sum_probs=208.5
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc-CCCCEEEEcCCCchH
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM-RKGSLIISDSLNHNS 197 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~-~~g~~Vl~~~~~h~~ 197 (489)
+..+++.+.++.--.+ ...+...++|+++++++|.+.++.++||+.|+..++.++. ++|+.|+++..++.+
T Consensus 6 e~~~~v~~~l~s~~~~--------~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~ 77 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWLS--------TYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPA 77 (363)
T ss_dssp HHHHHHHHHHHHTCCS--------SSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-TH
T ss_pred HHHHHHHHHHHhCCcc--------CCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchH
Confidence 4566777777762111 1145678999999999999999999999999988888874 789999999999999
Q ss_pred HHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 046230 198 IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKA 271 (489)
Q Consensus 198 ~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~ 271 (489)
+...+...|+.++.++.+ |++++++++.. +.++++++ +. .|..+++++|.++|+++|+
T Consensus 78 ~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~------------~t~ai~~~-h~---~G~~~d~~~i~~~~~~~~i 141 (363)
T PF01041_consen 78 TASAILWAGAEPVFVDIDPETLNIDPEALEKAITP------------KTKAILVV-HL---FGNPADMDAIRAIARKHGI 141 (363)
T ss_dssp HHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT------------TEEEEEEE--G---GGB---HHHHHHHHHHTT-
T ss_pred HHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc------------CccEEEEe-cC---CCCcccHHHHHHHHHHcCC
Confidence 999999999999988655 89999999886 35555554 33 3667799999999999999
Q ss_pred EEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCC-cceEEEeC-HHHHHHHHhhCC-C----------
Q 046230 272 YIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGS-CGGYIAGS-KELIQYLKYTCP-A---------- 336 (489)
Q Consensus 272 ~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~-~GG~i~~~-~~~~~~l~~~~~-~---------- 336 (489)
+||.|.+|++|..- .|+.+. .+| |+.+.|| +|.+.. -||+|+.+ +++.+.++.... +
T Consensus 142 ~lIeD~a~a~g~~~-~g~~~G-~~g------d~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (363)
T PF01041_consen 142 PLIEDAAQAFGARY-KGRPVG-SFG------DIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYR 213 (363)
T ss_dssp EEEEE-TTTTT-EE-TTEETT-SSS------SEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTE
T ss_pred cEEEccccccCcee-CCEecc-CCC------CceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCcccccccc
Confidence 99999999977532 333221 122 7777787 599943 25888875 566666654332 1
Q ss_pred ----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC-C-----CCCeEEEEe
Q 046230 337 ----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGD-N-----DSPVMPIML 405 (489)
Q Consensus 337 ----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~-~-----~~~~~~~~~ 405 (489)
..+...++++.++.+++.|+.+ ++..++-+++.+++.+.|.... +..... . ....+++.+
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L---------~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~ 284 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRL---------DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRL 284 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEE
T ss_pred ccccCCcccccHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence 1122358999999999998855 7788888899999999999983 422221 1 123466776
Q ss_pred CCC--CcHHHHHHHHhhCCceEEeecCCCc---CCC------------------CCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 406 YNP--AKIPAFSRECLRQNVAVVTVAFPAT---PLL------------------LARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~---~~~------------------~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
... ....++.+.|.++||.+.+...... |.. ...+.+-.....|++|+++++++|+
T Consensus 285 ~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 285 PDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 654 3578899999999999986332111 100 1246666667899999999999874
No 304
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=1.3e-18 Score=176.40 Aligned_cols=211 Identities=16% Similarity=0.259 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHH---HHHHHhcCCeEEEecCCCHHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSI---VNGARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~---~~~~~~~g~~~~~~~~~d~~~Le 221 (489)
++...+||+++|++.|.+.+++++||+.|+..++.++.++||.|++..+.|+++ ...+...|++++.++..|+++++
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~ 125 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVA 125 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHH
Confidence 455689999999999999999999999999888888899999999999988754 33566679999999988999999
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|+++.+.|++|.+.++++|.++|+++|+++|+|++|+.+.. ++....+
T Consensus 126 ~~l~~-------------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----------~~~~~~g 182 (397)
T PRK05939 126 AAIRP-------------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----------FRPKDVG 182 (397)
T ss_pred HhCCC-------------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----------cCccccC
Confidence 88753 345778899999999999999999999999999999999873311 1111124
Q ss_pred ccEEEcccccccCCcc---eEEEeC-HH--------HHH-------------HHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG---GYIAGS-KE--------LIQ-------------YLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G---G~i~~~-~~--------~~~-------------~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
+|+++.|++|.+++.| |+++.+ .. +.+ .++.... ..++..++|..+..+...|+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~p~~a~l~~rgl~ 261 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGL-RDMGATLSSEAAHRIAIGAE 261 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHH-HhcCCCCCHHHHHHHHcCcC
Confidence 5999999999998777 333332 21 111 1111100 12455688888877777776
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
.+ ..+.++..+|...+.+.|++.
T Consensus 262 tl---------~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 262 TL---------ALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred cH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 54 678888888999999999876
No 305
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=3.3e-18 Score=174.68 Aligned_cols=286 Identities=16% Similarity=0.159 Sum_probs=193.0
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEec-CCCHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQ-HNTPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~-~~d~~~ 219 (489)
++...+|++++|++.|.+.+++++||+.|+..++.++..+|+.|+++...|+++...+ ...|..++.++ ..|+++
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 4556899999999999999999999999998888899999999999888888765432 33577777664 346777
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
++++++. ++.+|++|.+.|++|.+.|+++|.++|+++|+++|+|++|+.+.+.. .. .
T Consensus 148 l~~ai~~-------------~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~-------pl---~ 204 (436)
T PRK07812 148 WRAAVRP-------------NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIR-------PL---E 204 (436)
T ss_pred HHHhCCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-------ch---h
Confidence 7766543 45588899999999999999999999999999999999997443211 11 1
Q ss_pred CCccEEEcccccccCCcc----eEEEeCHH------------------------------HHHHHHhhCCCcccccCCCH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSKE------------------------------LIQYLKYTCPAHLYATSISP 345 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~~------------------------------~~~~l~~~~~~~~~~~~~~p 345 (489)
.++|+++.|++|.+|+.| |.++.+.. ++...+.... ...+..++|
T Consensus 205 ~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~l~p 283 (436)
T PRK07812 205 HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLL-RDLGSAISP 283 (436)
T ss_pred cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHH-HhcCCCCCH
Confidence 245999999999998877 44443221 0101110000 013456889
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ce-e-eC----------------CCCCCeEEEEeC
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FE-V-LG----------------DNDSPVMPIMLY 406 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-v-~~----------------~~~~~~~~~~~~ 406 (489)
..+..++..|+-+ +.+.++..+++..+.+.|++.. +. | ++ ...+.++.+.+.
T Consensus 284 ~~a~l~~rgl~tL---------~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~ 354 (436)
T PRK07812 284 FNAFLIAQGLETL---------SLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELA 354 (436)
T ss_pred HHHHHHhcCcCcH---------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 8888887777744 7789999999999999999872 21 1 11 122456666664
Q ss_pred CC-CcHHHHHHHHhhCCceEEe------ecCCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NP-AKIPAFSRECLRQNVAVVT------VAFPAT--------------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~-~~~~~~~~~l~~~Gi~v~~------~~~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.. ....+|.+.|.--.+.+.- +..|.. ....+.+||++.+ ||.|.+++-|+++++
T Consensus 355 ~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~dl~~Al~ 430 (436)
T PRK07812 355 GGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILADLEAGFA 430 (436)
T ss_pred CCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 32 2244555554422211110 111211 1124689999964 566667777777776
Q ss_pred Hh
Q 046230 466 LV 467 (489)
Q Consensus 466 ~~ 467 (489)
..
T Consensus 431 ~~ 432 (436)
T PRK07812 431 AA 432 (436)
T ss_pred hh
Confidence 54
No 306
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2.7e-18 Score=173.25 Aligned_cols=209 Identities=18% Similarity=0.217 Sum_probs=161.8
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.+.+++++||+.++..++ .+.++||.|++..+.|++.... +...|++++.++..|++++
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 127 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEV 127 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 4556899999999999999999999998775544 5778999999999999865432 3446889998988899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+++++. ++.+|+++.+.|++|.+.++++|.++|+++|+++|+||+++.+.++ +. .+ .
T Consensus 128 ~~ai~~-------------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~---~p----~~---~ 184 (377)
T PRK07671 128 EEAIRP-------------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ---SP----IS---L 184 (377)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC---Ch----hh---h
Confidence 888754 3457778899999999999999999999999999999999733222 11 11 2
Q ss_pred CccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..||++.|++|.++++ ||+++. ++++++.++..... .+..++|..+..++..++.+ ..++++.+
T Consensus 185 g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~--~g~~~~~~~a~l~~~~l~tl---------~~R~~~~~ 253 (377)
T PRK07671 185 GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNS--TGGILGPQDSWLLLRGLKTL---------GIRMEEHE 253 (377)
T ss_pred CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHh--hcCCCCHHHHHHHHcCcChH---------HHHHHHHH
Confidence 3389999999999854 376655 56787777654432 23458888888777776654 55888888
Q ss_pred HHHHHHHHHHHhC
Q 046230 376 ENSNFFRSELQKM 388 (489)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (489)
++...+.+.|++.
T Consensus 254 ~na~~la~~L~~~ 266 (377)
T PRK07671 254 TNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999876
No 307
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.83 E-value=4.5e-18 Score=186.08 Aligned_cols=303 Identities=16% Similarity=0.119 Sum_probs=208.5
Q ss_pred CCcchhHHHHHHHHHHHhCCCCEEEeCccH----HHHHHhHhhhcCC-CC----EEEEcCCCchHHHHHHHhcCCeEEEe
Q 046230 142 GGTLMVHNELEECVARFVGKPAAIVFGMGY----VTNSAILPVLMRK-GS----LIISDSLNHNSIVNGARGSGATIRVF 212 (489)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~~~i~~~sG~----~a~~~~~~al~~~-g~----~Vl~~~~~h~~~~~~~~~~g~~~~~~ 212 (489)
.|..++..++++.|++++|.+..++..+.+ .++..+++++.++ |+ .|+++...|++....+...|.+++.+
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v 643 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV 643 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe
Confidence 455667789999999999995555543333 3567777777754 77 89999999999998888899999998
Q ss_pred cCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 213 QHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 213 ~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
+.+ |+++|+++++.. ..++++|++....+.+|...|+++|+++|+++|+++++|.++..+..+..
T Consensus 644 ~~d~~G~vDle~L~~~i~~~----------~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~ 713 (993)
T PLN02414 644 GTDAKGNINIEELRKAAEAH----------KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLT 713 (993)
T ss_pred ccCCCCCcCHHHHHHHHhcc----------CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcC
Confidence 875 899999999742 12456777777777788889999999999999999999999986543322
Q ss_pred CCccccccCCCCCCccEEEcccccccC------Ccc-eEEEeCHHHHHHHHhhC----CCc----c--cccCCC--HH-H
Q 046230 288 GRGVCELLEVDTADVDIMMGTFTKSFG------SCG-GYIAGSKELIQYLKYTC----PAH----L--YATSIS--PP-A 347 (489)
Q Consensus 288 G~~~~~~~~v~p~~~Di~~~t~sK~~g------~~G-G~i~~~~~~~~~l~~~~----~~~----~--~~~~~~--p~-~ 347 (489)
- .. .-++|++.++.+|+|+ ++| |+++.++.++..+.... ..+ . ...+.+ +. .
T Consensus 714 ~-----p~---~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~ 785 (993)
T PLN02414 714 S-----PG---FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGS 785 (993)
T ss_pred C-----cc---ccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhh
Confidence 1 11 1234999999999774 333 99998887766553210 000 0 001111 11 1
Q ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCC-----eEEEE-eC--CCCcHHHHHHHH
Q 046230 348 AEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSP-----VMPIM-LY--NPAKIPAFSREC 418 (489)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~-----~~~~~-~~--~~~~~~~~~~~l 418 (489)
...+..++.++.. .+.+...+..++...+.+|++++|++. +....++. ++ ++.+. +. ......++.++|
T Consensus 786 al~l~~A~~yi~~-lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~-~~~~hEfv~~~~~l~~~~g~~~~di~krL 863 (993)
T PLN02414 786 ALILPISYTYIAM-MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKN-GTCAHEFIIDLRPFKNTAGIEPEDVAKRL 863 (993)
T ss_pred HHHHHHHHHHHHH-HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCC-CCeeeeEEEeccccccccCCCHHHHHHHH
Confidence 2233333333321 244455566788889999999999873 33322221 22 11111 00 014457899999
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++.|+......+| ..+.+|++|+-..|++|||+++++|..+.++..
T Consensus 864 ~d~Gihapt~~~p----v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 864 MDYGFHAPTMSWP----VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHcCcEEeeeccc----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9999987655553 257899999999999999999999998887764
No 308
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.83 E-value=2.7e-18 Score=173.33 Aligned_cols=284 Identities=16% Similarity=0.155 Sum_probs=188.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.+.+++++||+.++.+++ ++.++|+.|++..+.|++.... +...|.++..++..|++++
T Consensus 49 ~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l 127 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQI 127 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHH
Confidence 3446889999999999999999999999886555 4678999999999888766432 3456888888888889998
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.++. ++.+|++|.+.+++|.+.++++|.++|+++|+++|+|++++.+.+++ ..+ .
T Consensus 128 ~~ai~~-------------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~-------p~~---~ 184 (380)
T PRK06176 128 KKAIKP-------------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN-------PLL---L 184 (380)
T ss_pred HHhcCc-------------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC-------ccc---c
Confidence 887753 34577788889999999999999999999999999999998432221 112 2
Q ss_pred CccEEEcccccccCCcc----eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..|+++.|++|.++++| |+++++ +++.+.++..... .+..++|..+..+...++. ...+.++..
T Consensus 185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~--~G~~~~~~~~~l~~~gl~t---------l~~R~~~~~ 253 (380)
T PRK06176 185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNA--IGGVLGPQDSWLLQRGIKT---------LGLRMEAHQ 253 (380)
T ss_pred CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHH--hcCCCCHHHHHHHHhccCc---------HHHHHHHHH
Confidence 34899999999997643 777774 5666666543322 2333667665555444432 355666777
Q ss_pred HHHHHHHHHHHhCC-Ce-ee----C------------CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe------ecCC
Q 046230 376 ENSNFFRSELQKMG-FE-VL----G------------DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT------VAFP 431 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-v~----~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~------~~~p 431 (489)
++...+.+.|++.. +. ++ . ...+.++.+.+.......+|.+.|.--.+.+.- +..|
T Consensus 254 ~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 333 (380)
T PRK06176 254 KNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIP 333 (380)
T ss_pred HHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCCceeeCC
Confidence 77777777777651 11 10 0 122556677775333333444443321111110 1112
Q ss_pred Cc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 432 AT--------------PLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 432 ~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. ....+.+|+++.. ||.|.+++-|+++++..
T Consensus 334 ~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 334 AFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 11 1124689999863 56777777777777654
No 309
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.83 E-value=1.1e-17 Score=168.46 Aligned_cols=275 Identities=18% Similarity=0.189 Sum_probs=190.0
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++. .++++++++|++++..++.++.++||.|++..+.|+.+...+ ...|++++.++.++...
T Consensus 51 p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-- 127 (366)
T PRK07582 51 PTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-- 127 (366)
T ss_pred ccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--
Confidence 44589999999999 678999999999988888888999999999988887765533 34688888888765432
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
. +. .++.+|+++.+.+++|.+.++++|.++|+++|+++++|++|... + |.. .... .
T Consensus 128 ~-~~-------------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~-~---~~~---p~~~---g 183 (366)
T PRK07582 128 A-AL-------------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP-L---GQR---PLEL---G 183 (366)
T ss_pred H-hc-------------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc-c---ccC---chhc---C
Confidence 1 11 13446778999999999999999999999999999999998621 1 111 1112 2
Q ss_pred ccEEEcccccccCCc-c---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSC-G---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~-G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+|++++|++|++++. | ||+++ ++++++.++..... .+..++|..+..+...|+.+ +.+.++..+
T Consensus 184 ~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~--~g~~~~~~~a~l~~r~l~tl---------~~R~~~~~~ 252 (366)
T PRK07582 184 ADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLL--AGAIPGPFEAWLAHRSLGTL---------GLRFARQCA 252 (366)
T ss_pred CcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHH--hCCCCCHHHHHHHHhccccH---------HHHHHHHHH
Confidence 389999999999653 3 88886 47787777644332 23457888888777777643 667788889
Q ss_pred HHHHHHHHHHhCC-Ce-ee----C-CC-----------CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCC--c---
Q 046230 377 NSNFFRSELQKMG-FE-VL----G-DN-----------DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPA--T--- 433 (489)
Q Consensus 377 ~~~~l~~~L~~~g-~~-v~----~-~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~--~--- 433 (489)
+...+.+.|++.. +. |. . ++ .+.++.+.+.+ ..+..+.+...++.....++.. .
T Consensus 253 na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~---~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 253 NALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD---AAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC---HHHHHHHHHhCCcceecccCCCccchhh
Confidence 9999999999872 21 11 1 11 35567777642 3444444444466654211111 0
Q ss_pred -------CCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 434 -------PLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 434 -------~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
....+.||+++..-.+++.|+.+.++|+
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0224689999987666666666555554
No 310
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.82 E-value=5.8e-18 Score=171.01 Aligned_cols=210 Identities=13% Similarity=0.162 Sum_probs=162.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
++...+|++.+|++.+.+.++++++|++++..++.++.++||.|++..+.|+++...+ ...+..+..++..|++++
T Consensus 50 ~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l 129 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQAL 129 (382)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHH
Confidence 3456899999999999888888888899888899999999999999999998755432 223466666666688888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|+++.+.+++|.+.++++|.++|+++|+++|+||+|..+.... .+..
T Consensus 130 ~~ai~~-------------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-------pl~~--- 186 (382)
T TIGR02080 130 RAALAQ-------------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN-------PLAL--- 186 (382)
T ss_pred HHhcCc-------------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC-------chhh---
Confidence 887754 34567788999999999999999999999999999999997432211 1111
Q ss_pred CccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..|+++.|++|.+++. +|+++. ++++++.++..... .+..++|..+..++..|+.+ ..++++..
T Consensus 187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~--~g~~~sp~~a~l~lr~l~tl---------~~R~~~~~ 255 (382)
T TIGR02080 187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANN--LGVTGGAFDSYLTLRGLRTL---------VARMRLQQ 255 (382)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHc--cCCCCCHHHHHHHHcccchH---------HHHHHHHH
Confidence 2389999999999753 387765 67787777654432 34558999998888887755 55678888
Q ss_pred HHHHHHHHHHHhC
Q 046230 376 ENSNFFRSELQKM 388 (489)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (489)
+|...+.+.|++.
T Consensus 256 ~na~~~a~~L~~~ 268 (382)
T TIGR02080 256 RNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999876
No 311
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=5.9e-18 Score=173.35 Aligned_cols=211 Identities=19% Similarity=0.260 Sum_probs=163.0
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+...+|++++|++.|.+.+++++||++|+..++.++.++|+.|++..+.|++.... +...|+.++.++.+|+++++
T Consensus 63 p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 142 (427)
T PRK05994 63 PTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFE 142 (427)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 44578999999999999999999999999988998999999999999999875443 45678999999888999998
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.++. ++.+|+++.+.|++|.+.++++|.++|+++|+++|+|++|+.+.. ...+. ..
T Consensus 143 ~ai~~-------------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-------~~pl~---~g 199 (427)
T PRK05994 143 RAITP-------------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-------IRPIE---HG 199 (427)
T ss_pred HhcCc-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-------CCccc---cC
Confidence 88753 345777899999999999999999999999999999999984322 11222 23
Q ss_pred ccEEEcccccccCCcc----eEEEeCHH-----------------------HHHHHH-------h-hCCCcccccCCCHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKE-----------------------LIQYLK-------Y-TCPAHLYATSISPP 346 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~-----------------------~~~~l~-------~-~~~~~~~~~~~~p~ 346 (489)
+|+++.|++|.+|+.| |+++.... +.+.+. . .......+..++|.
T Consensus 200 aDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 279 (427)
T PRK05994 200 ADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPF 279 (427)
T ss_pred CcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHH
Confidence 4999999999998655 55553211 111110 0 00001234568999
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
.++.++..|+.+ +.+.++..++...+.+.|++.
T Consensus 280 ~A~l~~~~l~tL---------~~r~~~~~~~a~~la~~L~~~ 312 (427)
T PRK05994 280 NAFLILTGIETL---------PLRMQRHSDNALAVAEWLKGH 312 (427)
T ss_pred HHHHHHcCcccH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 999888888755 778899999999999999876
No 312
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=5.3e-18 Score=170.49 Aligned_cols=210 Identities=14% Similarity=0.140 Sum_probs=168.1
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
++..+.|++.++.+-+.+.+++++||++|+..++.++.++||.|++..+.|+++.. .++..|.++..++.++.+.+
T Consensus 63 nPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l 142 (395)
T PRK05967 63 TPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGI 142 (395)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHH
Confidence 56668899999999888899999999999988899999999999999999998764 34667888888877777777
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|++|.+.|+.+.+.++++|+++|+++|+++++|++++.+.+- ..+. .
T Consensus 143 ~~al~~-------------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-------~pl~---~ 199 (395)
T PRK05967 143 AKLMRP-------------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-------RPLD---F 199 (395)
T ss_pred HHhcCc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-------ChhH---c
Confidence 777754 3457888988899999999999999999999999999999833221 1111 2
Q ss_pred CccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
++||++.|.+|.+++.| |+++.+++..+.+..... ..+..++|.-+..++..|+-+ .-+.++..+
T Consensus 200 GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~--~~G~~~~p~da~l~~rgl~Tl---------~lR~~~~~~ 268 (395)
T PRK05967 200 GVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHG--TLGLCAGPDDTYQILRGLRTM---------GIRLEHHRK 268 (395)
T ss_pred CCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHH--HcCCCCCHHHHHHHHcCcccH---------HHHHHHHHH
Confidence 34999999999998755 777778777666653322 245669999988888887755 668888888
Q ss_pred HHHHHHHHHHhC
Q 046230 377 NSNFFRSELQKM 388 (489)
Q Consensus 377 ~~~~l~~~L~~~ 388 (489)
++..+.+.|++.
T Consensus 269 na~~lA~~L~~h 280 (395)
T PRK05967 269 SALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHhC
Confidence 998888888876
No 313
>PLN02590 probable tyrosine decarboxylase
Probab=99.82 E-value=2.6e-17 Score=170.81 Aligned_cols=345 Identities=13% Similarity=0.101 Sum_probs=223.7
Q ss_pred ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC---------EEEeCccHHHHH
Q 046230 106 GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKPA---------AIVFGMGYVTNS 175 (489)
Q Consensus 106 ~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~ 175 (489)
.+..|+|+-...+.....+.+.+.. ++..........+.+.+..++-+.+++++|.++ .++.++||++|.
T Consensus 129 ~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl 208 (539)
T PLN02590 129 QSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVL 208 (539)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHH
Confidence 3455666655545555666665554 222222222333445666667777777777654 467788999995
Q ss_pred HhHhhhcC-----------CCCEEEEcCCCchHHHHHHHhcCC---eEEEecCC-------CHHHHHHHHHHHHhcCCCC
Q 046230 176 AILPVLMR-----------KGSLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQIAEGQPR 234 (489)
Q Consensus 176 ~~~~al~~-----------~g~~Vl~~~~~h~~~~~~~~~~g~---~~~~~~~~-------d~~~Le~~l~~~~~~g~~~ 234 (489)
.++.+... +.-+|++.+..|.|+..++++.|. .++.++.+ |+++|++.|++...+|
T Consensus 209 ~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g--- 285 (539)
T PLN02590 209 VVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKG--- 285 (539)
T ss_pred HHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcC---
Confidence 44443221 233677888899999999999886 35555543 7899999998876665
Q ss_pred CCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcc-ccccCCCCCCccEEEccccccc
Q 046230 235 THRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV-CELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 235 ~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~-~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
....+|+..--.+.+|.+.||++|.++|++||+||++|.||+ ++...-... .-..|+ ..+|-+...++|++
T Consensus 286 ----~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~G--G~al~~~~~r~~~~Gi--e~ADSit~D~HK~l 357 (539)
T PLN02590 286 ----FIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYA--GNACICPEYRKFIDGI--ENADSFNMNAHKWL 357 (539)
T ss_pred ----CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchh--hhhhcChhhHHHhcCC--ccCCEEEECchhhc
Confidence 234444443334558999999999999999999999999998 432111110 112344 33588888999999
Q ss_pred CCc-c-eEEEeCH--HHHHHHHhhCC----------------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 314 GSC-G-GYIAGSK--ELIQYLKYTCP----------------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 314 g~~-G-G~i~~~~--~~~~~l~~~~~----------------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
..+ + |.+..++ .+.+.+..... .+.... .-+..+.....+|+.+ +.+...+.+++
T Consensus 358 ~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l-sRr~raLklW~~lr~~----G~~G~~~~i~~ 432 (539)
T PLN02590 358 FANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL-SRRFRSLKLWMVLRLY----GSENLRNFIRD 432 (539)
T ss_pred CcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC-CCchHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 643 3 6666553 23333221100 000111 1234566677777776 44467788888
Q ss_pred HHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC--------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee
Q 046230 374 IRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA--------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~ 444 (489)
..+++++|.+.|++. +|+++.++...++++.+..+. ...++.+++.+.|..... ++.-.+...+|+|+
T Consensus 433 ~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs---~t~~~g~~~lR~~i 509 (539)
T PLN02590 433 HVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFIS---HTALSGKFVLRFAV 509 (539)
T ss_pred HHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEE---eeEECCEEEEEEEe
Confidence 899999999999887 799887777777777664321 123677788888665542 22234567899997
Q ss_pred c-CCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 445 S-ASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 445 ~-~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
. ...|++|++.+++.|.+...++..
T Consensus 510 ~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 510 GAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 4 567899999999999998877753
No 314
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=3.9e-17 Score=167.61 Aligned_cols=286 Identities=16% Similarity=0.183 Sum_probs=195.7
Q ss_pred hHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---------cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--
Q 046230 147 VHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---------MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-- 215 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-- 215 (489)
...++++++|++++.+.+++++||++++..++.++ .++|+.|+++.++|.++...+...|+.++.++.+
T Consensus 64 ~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~ 143 (438)
T PRK15407 64 FNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELP 143 (438)
T ss_pred hHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 35899999999999998898999999997777665 3789999999999999999999999998877643
Q ss_pred ----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcc
Q 046230 216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV 291 (489)
Q Consensus 216 ----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~ 291 (489)
|++++++.+.. +.++ |++.++ .|...++++|.++|+++|++||+|++|++|..- .|+.+
T Consensus 144 ~~~id~~~le~~i~~------------~tka-Vi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~-~g~~~ 206 (438)
T PRK15407 144 TYNIDASLLEAAVSP------------KTKA-IMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY-DGRMT 206 (438)
T ss_pred cCCcCHHHHHHHcCc------------CCeE-EEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhc-CCeee
Confidence 67778777643 3444 444433 466779999999999999999999999977542 23321
Q ss_pred ccccCCCCCCccEEEcccc--cccC-CcceEEEeC-HHHHHHHHh---hCCC----------------------------
Q 046230 292 CELLEVDTADVDIMMGTFT--KSFG-SCGGYIAGS-KELIQYLKY---TCPA---------------------------- 336 (489)
Q Consensus 292 ~~~~~v~p~~~Di~~~t~s--K~~g-~~GG~i~~~-~~~~~~l~~---~~~~---------------------------- 336 (489)
. -+| |+.+.||. |.+. +.||+++.+ +++.+.++. ....
T Consensus 207 G-~~g------d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (438)
T PRK15407 207 G-TFG------DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDH 279 (438)
T ss_pred e-ccC------ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccc
Confidence 1 111 56655664 6564 335888876 445443332 1100
Q ss_pred ------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeC-C-CCC---CeEEE
Q 046230 337 ------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLG-D-NDS---PVMPI 403 (489)
Q Consensus 337 ------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~-~-~~~---~~~~~ 403 (489)
..+...++.+.+|.++..|+.+ ++.+++-+++.+++.+.|.... +.+.. + ... ..+++
T Consensus 280 ~~~~~~~G~n~rmsel~AAig~~qL~~l---------~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i 350 (438)
T PRK15407 280 KYTYSHLGYNLKITDMQAAIGLAQLEKL---------PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPI 350 (438)
T ss_pred cccccccccccCccHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEE
Confidence 0122357888999999999865 6788888888899999998763 22211 1 111 13445
Q ss_pred EeCCC--CcHHHHHHHHhhCCceEEeecCCCc---C--------------C----CCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 404 MLYNP--AKIPAFSRECLRQNVAVVTVAFPAT---P--------------L----LLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 404 ~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~---~--------------~----~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
.+... ....++.+.|.++||.+.+...+.. | . ....+-+-+....|++|+++++++|
T Consensus 351 ~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i 430 (438)
T PRK15407 351 TVKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKI 430 (438)
T ss_pred EECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHH
Confidence 55432 3467899999999997763111010 0 0 1123444444567999999999999
Q ss_pred HHHHH
Q 046230 461 SRVGD 465 (489)
Q Consensus 461 ~~~~~ 465 (489)
+++++
T Consensus 431 ~~~~~ 435 (438)
T PRK15407 431 EEFFG 435 (438)
T ss_pred HHHHh
Confidence 98874
No 315
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=4.8e-18 Score=172.54 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=163.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCC-CHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-TPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~-d~~~ 219 (489)
.+...+||+.+|++.|.+.++.++||++|+..++.++.++||.|++..+.|+++... +...|+++..+..+ |+++
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~ 139 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADE 139 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 355689999999999999999999999999888888899999999999999977665 56679999988875 8899
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
++++|++ ++.+|++|...++.+.+.++++|+++|+++|+++|+|++++... .+..+.
T Consensus 140 l~~~I~~-------------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~-------~~~pl~--- 196 (432)
T PRK06702 140 IVALAND-------------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY-------LCQAFE--- 196 (432)
T ss_pred HHHhCCc-------------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh-------hCChhh---
Confidence 9998865 34466688889999999999999999999999999999985221 122222
Q ss_pred CCccEEEcccccccCCcc----eEEEeCH----------HHH---------------------HHHH-hhCCCcccccCC
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSK----------ELI---------------------QYLK-YTCPAHLYATSI 343 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~----------~~~---------------------~~l~-~~~~~~~~~~~~ 343 (489)
..+||++.|+||.+++.+ |.++... +++ ...+ .... .++..+
T Consensus 197 ~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~ 274 (432)
T PRK06702 197 HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLR--DYGNCM 274 (432)
T ss_pred cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHH--HccCCC
Confidence 234999999999887655 6665321 111 1111 1111 245579
Q ss_pred CHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 344 SPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
+|..+..++..|+.+ +.++++..+|...+.+.|++.
T Consensus 275 sp~~a~l~~rgL~Tl---------~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 275 SPFNAYISNIGLETL---------HLRMERHSENALAVAKWLADH 310 (432)
T ss_pred CHHHHHHHHhccCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 999999998888754 678888889999999999987
No 316
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.4e-18 Score=174.85 Aligned_cols=286 Identities=15% Similarity=0.185 Sum_probs=195.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+....|++.+|++.|.+.+++++||++|+..++.++.++||.|++..+.|+.... .++..|++++.++..|++++
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l 142 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENF 142 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHH
Confidence 34468899999999999999999999999988888889999999999988876543 34557999999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|+++.+.|++|.+.++++|.++|+++|+++|+|++++.+.. ..... .
T Consensus 143 ~~ai~~-------------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-------~~pl~---~ 199 (431)
T PRK08248 143 EAAITD-------------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-------LRPIE---H 199 (431)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-------CChhH---c
Confidence 888754 344667788899999999999999999999999999999873211 11111 3
Q ss_pred CccEEEcccccccCCcc----eEEEeCHHHH-----------------------H---------HHHhhCCCcccccCCC
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSKELI-----------------------Q---------YLKYTCPAHLYATSIS 344 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~~~~-----------------------~---------~l~~~~~~~~~~~~~~ 344 (489)
++|+++.|++|.+|++| |+++.+.+.. + ..... .....+..++
T Consensus 200 gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~l~ 278 (431)
T PRK08248 200 GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQ-LLRDLGAALS 278 (431)
T ss_pred CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHH-HHHhcCCCCC
Confidence 45999999999999777 5555433210 1 00000 0112345688
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe-e-eC----------------CCCCCeEEEEe
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE-V-LG----------------DNDSPVMPIML 405 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-v-~~----------------~~~~~~~~~~~ 405 (489)
|..+..++..|+.+ +.+.++..+++..+.+.|++. ++. | ++ ...+.++.+.+
T Consensus 279 p~~a~l~~rgl~tl---------~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l 349 (431)
T PRK08248 279 PFNSFLLLQGLETL---------HLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGI 349 (431)
T ss_pred HHHHHHHhcCcCcH---------HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEe
Confidence 98888888877754 678899999999999999987 221 1 11 11245666666
Q ss_pred CCC-CcHHHHHHHHhhCCceEEe------ecCCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 406 YNP-AKIPAFSRECLRQNVAVVT------VAFPAT--------------PLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 406 ~~~-~~~~~~~~~l~~~Gi~v~~------~~~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
... ....+|.+.|.--.+.+.- +..|.. ....+.+||++.. ||.+.+++-|++++
T Consensus 350 ~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~Dl~~Al 425 (431)
T PRK08248 350 KGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT----EAIDDILDDLRQAI 425 (431)
T ss_pred cCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHH
Confidence 422 2233454444321111110 112211 1125689999964 56667777777777
Q ss_pred HHh
Q 046230 465 DLV 467 (489)
Q Consensus 465 ~~~ 467 (489)
+..
T Consensus 426 ~~~ 428 (431)
T PRK08248 426 RQS 428 (431)
T ss_pred Hhh
Confidence 654
No 317
>PLN02271 serine hydroxymethyltransferase
Probab=99.82 E-value=2.1e-17 Score=168.27 Aligned_cols=335 Identities=17% Similarity=0.165 Sum_probs=214.4
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHH----HHHHHHhCCCC-----EEEeC
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELE----ECVARFVGKPA-----AIVFG 168 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~ 168 (489)
++.|++ .|-|+. .|.+.+++.-.+.+ |..+..+.|...|. +...++| ++..++++.+. .+-.-
T Consensus 148 ~~~l~LIASEN~~-----S~av~~algS~ltnkYaEG~pG~Ryy~G~-~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASENFV-----CRAVMEALGSHLTNKYSEGMPGARYYTGN-QYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeeccccccC-----CHHHHHHhcCcccccCCCCCCCCcCCCCC-hhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 455665 333322 34455555444433 77777776766554 3333443 44455667442 34456
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH---------HHhcCCeE--EEecCC------CHHHHHHHHHHHHhcC
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG---------ARGSGATI--RVFQHN------TPSHLEEVLREQIAEG 231 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~---------~~~~g~~~--~~~~~~------d~~~Le~~l~~~~~~g 231 (489)
||+.||.+++.++.+|||.|+.-...|+..... +..+|..+ .+++.+ |++++++.+..
T Consensus 222 SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~----- 296 (586)
T PLN02271 222 SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD----- 296 (586)
T ss_pred cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-----
Confidence 999999999999999999999876666553321 12334333 334443 88999986654
Q ss_pred CCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccc
Q 046230 232 QPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTK 311 (489)
Q Consensus 232 ~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK 311 (489)
.+..+|++.....+ ...|+++++++|+++|++|++|.+|..|.+... .+...-..+|++++|.+|
T Consensus 297 -------~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g------~~~sP~~~aDvvt~TTHK 361 (586)
T PLN02271 297 -------FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAK------ECVNPFDYCDIVTSTTHK 361 (586)
T ss_pred -------cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccC------cCCCCCcCCcEEEeCCcc
Confidence 23445666553332 457899999999999999999999997765321 111111346999999999
Q ss_pred cc-CCcceEEEeCHH--------------------HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 312 SF-GSCGGYIAGSKE--------------------LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 312 ~~-g~~GG~i~~~~~--------------------~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
+| |+.||+|+.+++ +.+.+...-.+..-+. ......|+...+++.++ ..+..+.
T Consensus 362 tLrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG-phn~~IAalAvalkea~----~~efk~Y 436 (586)
T PLN02271 362 SLRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG-PHNNHIAALAIALKQVA----TPEYKAY 436 (586)
T ss_pred cCCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccC-hhHHHHHHHHHHHHHHh----ChHHHHH
Confidence 99 777888887653 3344433322221121 22223555555666552 2355789
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeC-CCCCCeEEEEeCCCC-cHHHHHHHHhhCCceEEeecCCC--cCCCCCeEEEeecC
Q 046230 371 LARIRENSNFFRSELQKMGFEVLG-DNDSPVMPIMLYNPA-KIPAFSRECLRQNVAVVTVAFPA--TPLLLARARICISA 446 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~g~~v~~-~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~p~--~~~~~~~iRi~~~~ 446 (489)
.+++.+|++.|.+.|.+.|++++. ..+++++.+.+.... ....+.+.|.+.||.+.-..-|. .|...+.+||..+.
T Consensus 437 a~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~a 516 (586)
T PLN02271 437 MQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPA 516 (586)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHH
Confidence 999999999999999999999763 455777666664322 45566666666699987633332 23345679998764
Q ss_pred C----CCHHHHHHHHHHHHHHHH
Q 046230 447 S----HTKEDLIKALEVISRVGD 465 (489)
Q Consensus 447 ~----~t~edid~~l~~l~~~~~ 465 (489)
. ..++|++++.+.|.++++
T Consensus 517 lT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 517 MTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHh
Confidence 3 456999999999999887
No 318
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=5.3e-18 Score=170.08 Aligned_cols=280 Identities=16% Similarity=0.139 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhc--CCeEEEecCCCHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGS--GATIRVFQHNTPSHLEEV 223 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~--g~~~~~~~~~d~~~Le~~ 223 (489)
+...+|++++|++.+.+.++++++|.+|+..++. +.++||.|++....|+....-+... ...+...-..|++++++.
T Consensus 54 p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 132 (364)
T PRK07269 54 PTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIAA 132 (364)
T ss_pred ccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHHh
Confidence 4458999999999999999999999999977764 5689999999988887655433221 111111112478888887
Q ss_pred HHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCcc
Q 046230 224 LREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVD 303 (489)
Q Consensus 224 l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~D 303 (489)
++. ++.+|++|.+.+++|.+.++++|+++|+++|+++|+|+++..+.+. + ..+ ...|
T Consensus 133 i~~-------------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~---~----pl~---~gaD 189 (364)
T PRK07269 133 IEE-------------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ---R----PIE---LGAD 189 (364)
T ss_pred cCc-------------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---C----chh---hCCc
Confidence 754 3457888999999999999999999999999999999997633211 1 122 2349
Q ss_pred EEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 304 IMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 304 i~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
|++.|++|.+++. ||+|++ ++++.+.++.... ..+..++|..++.++..|+.+ +.++++.+++.
T Consensus 190 ivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~--~~G~~~s~~~a~l~~~~L~tL---------~~r~~~~~~na 258 (364)
T PRK07269 190 IVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLN--TTGAVLSPFDSYLLMRGLKTL---------SLRMERSTANA 258 (364)
T ss_pred EEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHcCCCcH---------HHHHHHHHHHH
Confidence 9999999999863 488777 5777777764322 234568999999998888754 77888889999
Q ss_pred HHHHHHHHhCC-C-eeeCCCCCCeEEEEeCCCCcHHHHHHHHhh----------CCceEEeecCC--C--------cCCC
Q 046230 379 NFFRSELQKMG-F-EVLGDNDSPVMPIMLYNPAKIPAFSRECLR----------QNVAVVTVAFP--A--------TPLL 436 (489)
Q Consensus 379 ~~l~~~L~~~g-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~Gi~v~~~~~p--~--------~~~~ 436 (489)
..+.+.|++.. + .+.-+..+.++.+.+.......+|.+.+.- +.+.+.|..-. . ....
T Consensus 259 ~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~ 338 (364)
T PRK07269 259 QEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLT 338 (364)
T ss_pred HHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCC
Confidence 99999998873 2 344334466677776532223344443331 12222221000 0 0112
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 437 LARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.+||++.. ||.+.+++-|++++
T Consensus 339 ~~liRlsvGl----E~~~dli~dl~~al 362 (364)
T PRK07269 339 DDLLRLSIGI----EDARDLIADLKQAL 362 (364)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHh
Confidence 4689999964 45666666666665
No 319
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=5.4e-18 Score=173.54 Aligned_cols=210 Identities=18% Similarity=0.211 Sum_probs=153.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|+++||++.|.+.+++++||++|+..++.++.++|+.|++..+.|+++.. .+...|++++.++.+|++++
T Consensus 56 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l 135 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEF 135 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 34468999999999999999999999999988888889999999999988876543 34567999999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++.+ +..+|+++++.|++|.+.++++|+++|+++|+++|+|++|+.+.+ ..... .
T Consensus 136 ~~~l~~-------------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-------~~~l~---~ 192 (418)
T TIGR01326 136 EKAIDE-------------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-------CRPID---H 192 (418)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-------CCchh---c
Confidence 888754 344677899999999999999999999999999999999974321 11111 2
Q ss_pred CccEEEcccccccCCcc---eEEEeCH-HHHHH-------------------------------HH-hhCCCcccccCCC
Q 046230 301 DVDIMMGTFTKSFGSCG---GYIAGSK-ELIQY-------------------------------LK-YTCPAHLYATSIS 344 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G---G~i~~~~-~~~~~-------------------------------l~-~~~~~~~~~~~~~ 344 (489)
++||++.|++|+++++| |+++.++ .+... .+ ..... .+..++
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~ 270 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRD--LGAALS 270 (418)
T ss_pred CCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHh--cCCCCC
Confidence 34999999999999877 5555432 22100 00 00000 123355
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
|..+..++..|+- ...+.++..++...+.+.|.+.
T Consensus 271 p~~a~~~~~~l~t---------l~~R~~~~~~~a~~la~~L~~~ 305 (418)
T TIGR01326 271 PFNAFLLLQGLET---------LSLRMERHVENALKVAEFLEAH 305 (418)
T ss_pred HHHHHHHHCCccc---------HHHHHHHHHHHHHHHHHHHHhC
Confidence 6655555554443 3556677777888888888875
No 320
>PLN02880 tyrosine decarboxylase
Probab=99.82 E-value=1.4e-17 Score=172.87 Aligned_cols=344 Identities=13% Similarity=0.091 Sum_probs=214.5
Q ss_pred ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC---------EEEeCccHHHHH
Q 046230 106 GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKPA---------AIVFGMGYVTNS 175 (489)
Q Consensus 106 ~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~ 175 (489)
.+..|+|+-+..+.....+.+.+.. ++............+.+..++-+.+++++|.++ .++.++||++|.
T Consensus 81 ~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl 160 (490)
T PLN02880 81 QSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVL 160 (490)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHH
Confidence 3456666655544455555555544 222222222223455666777777888888654 466778899994
Q ss_pred HhHhhhcC-----------CCCEEEEcCCCchHHHHHHHhcCCe---EEEecCC-------CHHHHHHHHHHHHhcCCCC
Q 046230 176 AILPVLMR-----------KGSLIISDSLNHNSIVNGARGSGAT---IRVFQHN-------TPSHLEEVLREQIAEGQPR 234 (489)
Q Consensus 176 ~~~~al~~-----------~g~~Vl~~~~~h~~~~~~~~~~g~~---~~~~~~~-------d~~~Le~~l~~~~~~g~~~ 234 (489)
.++.+... +.-+|++.+..|.|+..+++..|.. ++.++.+ |+++|++.|++...+|
T Consensus 161 ~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g--- 237 (490)
T PLN02880 161 VVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSG--- 237 (490)
T ss_pred HHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCC---
Confidence 44433221 2336777888899999999999873 4555442 7899999998876655
Q ss_pred CCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC
Q 046230 235 THRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG 314 (489)
Q Consensus 235 ~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g 314 (489)
....+|+..--.+.+|.+.|+++|.++|++||+++++|.+|+.+.+-. ...-....|+ ..+|.+...++|++.
T Consensus 238 ----~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~-~~~~~~l~gi--e~aDSit~d~HKwl~ 310 (490)
T PLN02880 238 ----LIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACIC-PEYRHYIDGV--EEADSFNMNAHKWFL 310 (490)
T ss_pred ----CccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhC-HHHHHHhcCc--hhcCEEEECchhhcC
Confidence 234445544444668999999999999999999999999998442211 0000012233 235899999999996
Q ss_pred Cc-c-eEEEeCH--HHHHHHHhhCCCccc---------------cc-CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 315 SC-G-GYIAGSK--ELIQYLKYTCPAHLY---------------AT-SISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 315 ~~-G-G~i~~~~--~~~~~l~~~~~~~~~---------------~~-~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
.+ | |++..++ .+++.+... ..+.. +. ......+.....+|+.+ +.+...+++++.
T Consensus 311 ~P~~~g~llvr~~~~l~~~~~~~-~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~----G~~g~~~~i~~~ 385 (490)
T PLN02880 311 TNFDCSLLWVKDRNALIQSLSTN-PEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLY----GVENLQSYIRNH 385 (490)
T ss_pred CCccEEEEEEeCHHHHHHHHccC-HHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHh----CHHHHHHHHHHH
Confidence 43 4 7766553 222222111 00000 00 01111234455566665 333455555655
Q ss_pred HHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC-c-------HHHHHHHHhhCC-ceEEeecCCCcCCCCCeEEEee
Q 046230 375 RENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA-K-------IPAFSRECLRQN-VAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 375 ~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~-~-------~~~~~~~l~~~G-i~v~~~~~p~~~~~~~~iRi~~ 444 (489)
.++++++.+.|++. ++++..++...++.+.+.... . ..++.++|.+.| +.+.... -.+..++|+++
T Consensus 386 ~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~----~~g~~~lR~~~ 461 (490)
T PLN02880 386 IKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV----LSGKYVLRFAV 461 (490)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE----ECCEEEEEEEe
Confidence 69999999999887 888887777777777664321 1 135677777774 4444322 24567999998
Q ss_pred cCCC-CHHHHHHHHHHHHHHHHHhC
Q 046230 445 SASH-TKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 445 ~~~~-t~edid~~l~~l~~~~~~~~ 468 (489)
.... |++|++.+++.|.++.+++.
T Consensus 462 ~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 462 GAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6554 56999999999999887763
No 321
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.82 E-value=6.5e-18 Score=171.06 Aligned_cols=289 Identities=15% Similarity=0.056 Sum_probs=198.4
Q ss_pred chhHHHHHHHHHHHhCCC---CEEEeC-ccHHHHHHhHhhhcCC-CCEEEEcCCCchHHHHH-H-HhcCC-eEEEecCCC
Q 046230 145 LMVHNELEECVARFVGKP---AAIVFG-MGYVTNSAILPVLMRK-GSLIISDSLNHNSIVNG-A-RGSGA-TIRVFQHNT 216 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~~~~al~~~-g~~Vl~~~~~h~~~~~~-~-~~~g~-~~~~~~~~d 216 (489)
.+...+.++.++++++.+ +.++++ |||.+..+++..+.++ ++.|+. ...|++.+.. + +..|. +++.++.++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~ 125 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY 125 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC
Confidence 577789999999999963 344454 7888887777777764 556665 5688876554 2 44577 777765431
Q ss_pred --HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 217 --PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 217 --~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
.-++++ ++. .+ +|.+..+.+.+|.+.|+++|++ +++|+++++|.+|++|.. .
T Consensus 126 g~~~d~~~-i~~-------------~~-~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~---------p 179 (378)
T PRK03080 126 GSLPDLSA-VDF-------------DR-DVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL---------P 179 (378)
T ss_pred CCCCCHhh-cCC-------------CC-CEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccC---------C
Confidence 112332 211 22 3556677788999999999999 889999999999998743 3
Q ss_pred cCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCCC-------------------ccccc--CCCHHHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCPA-------------------HLYAT--SISPPAAEQI 351 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~~-------------------~~~~~--~~~p~~~aa~ 351 (489)
+++ .++|++++|..|+|+ ++| |+++.+++.++.+.....+ +..++ +.+.....+.
T Consensus 180 idv--~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l 257 (378)
T PRK03080 180 LDW--SKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDY 257 (378)
T ss_pred CCH--HHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHH
Confidence 333 347999999999995 478 9999999988876542110 00111 1233345556
Q ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC---CCC-CeEEEEeCCC--CcHHHHHHHHhhCCce
Q 046230 352 ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGD---NDS-PVMPIMLYNP--AKIPAFSRECLRQNVA 424 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~---~~~-~~~~~~~~~~--~~~~~~~~~l~~~Gi~ 424 (489)
.++|+.+... +..+++.++.+++.+++++.|++++ +.+... ..+ .++.+.+... ....++...|.++|+.
T Consensus 258 ~~al~~l~~~---gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~ 334 (378)
T PRK03080 258 LDQLDWANSI---GGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGA 334 (378)
T ss_pred HHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCe
Confidence 7889988531 1357788999999999999999986 455431 223 3555555431 1234567778888888
Q ss_pred EEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 425 VVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 425 v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+....+.. ..+.+|+++...+|++|+++++++|+++++++.
T Consensus 335 v~~g~~~~---~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 335 VDIEPYRD---APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred eccccccC---CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 77433321 236799999999999999999999999887653
No 322
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.80 E-value=9.1e-17 Score=162.99 Aligned_cols=298 Identities=18% Similarity=0.226 Sum_probs=198.0
Q ss_pred chhHHHHHHHHHHHhCCC---CEEEeCccH-HHHHHhHhhhcC---CCCEEEEcCCCchHHHHHHHhcCCeEEEecC---
Q 046230 145 LMVHNELEECVARFVGKP---AAIVFGMGY-VTNSAILPVLMR---KGSLIISDSLNHNSIVNGARGSGATIRVFQH--- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---~~i~~~sG~-~a~~~~~~al~~---~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--- 214 (489)
..+..++++.+++++|.+ .++++++|| .++..++.++.. +++.|+++...|.++..++...|++++.++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 456688999999999987 688888888 466656666542 5899999999999999999999999888873
Q ss_pred -C----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 215 -N----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 215 -~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
+ |+++|+++|.+. .++.+++|+..+.+...|..+++++|.++|++||+++|+|+||+.+. ..-.
T Consensus 184 ~~~~~iD~e~Le~aIt~~---------~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~--~~~~ 252 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEI---------GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS--NKYM 252 (444)
T ss_pred CcCCCcCHHHHHHHHHhc---------cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC--hhhh
Confidence 1 889999999752 01245555554444555678999999999999999999999998321 1100
Q ss_pred ccccccCCCCCCccEEEcccccccCCcc--eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCch
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSR 366 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~ 366 (489)
... .-+.....+|+++.+++|.+..+| |+++. ++++++.+...... ....+| .+.+..+.+. + +.+.
T Consensus 253 ~~~-~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g---~~~~s~-~~~~~~~ll~-~----G~~g 322 (444)
T TIGR03531 253 ELI-NKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG---RASASP-SLDVLITLLS-L----GSKG 322 (444)
T ss_pred hhh-hccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC---CCCChH-HHHHHHHHHH-h----CHHH
Confidence 000 011211134888889999997644 55556 68888877654222 111222 3333333332 2 3446
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC---CCcHHHHHHHHhhCCceEEeecCCCc------
Q 046230 367 GAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN---PAKIPAFSRECLRQNVAVVTVAFPAT------ 433 (489)
Q Consensus 367 ~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~v~~~~~p~~------ 433 (489)
.++++++..++.+++.+.|+++ |..+...+..++-..+.-. +.+...+...|..++|.-..+..|..
T Consensus 323 ~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~ 402 (444)
T TIGR03531 323 YLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGG 402 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECC
Confidence 7888889999999999999876 6777766566643222211 34567888889888774321111111
Q ss_pred ----CC-------CCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 434 ----PL-------LLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 434 ----~~-------~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.. ...++-++....+|++|+|.++++|+++
T Consensus 403 ~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 00 0123444444568999999999999875
No 323
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.80 E-value=6.6e-17 Score=177.88 Aligned_cols=307 Identities=14% Similarity=0.132 Sum_probs=206.0
Q ss_pred cchhHHHHHHHHHHHhCCC--C-EEEeCccH-HHHHHhHhhh-cCCCCEEEEcCCCchHHHHHHH---hcCCeEEEecCC
Q 046230 144 TLMVHNELEECVARFVGKP--A-AIVFGMGY-VTNSAILPVL-MRKGSLIISDSLNHNSIVNGAR---GSGATIRVFQHN 215 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--~-~i~~~sG~-~a~~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~---~~g~~~~~~~~~ 215 (489)
..+..++.++.+|++++.+ + .|+|++|+ +++..++..+ .++|+.|++....|.+...... ..|++++.++.+
T Consensus 76 ~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~ 155 (805)
T PLN02724 76 SSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIE 155 (805)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccch
Confidence 3567789999999999973 3 46777655 4445555555 4678999998899988664332 348888877643
Q ss_pred -----------CH----HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc--------CcE
Q 046230 216 -----------TP----SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY--------KAY 272 (489)
Q Consensus 216 -----------d~----~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~--------~~~ 272 (489)
++ ++|++.++..+..- .....++.+|++..+.+.+|.+.|++.|..+++.. +++
T Consensus 156 ~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~---~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~ 232 (805)
T PLN02724 156 EAANQPTNSQGSVVVKSRGLQRRNTSKLQKR---EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWM 232 (805)
T ss_pred hccccccccccccccchhhhhhhhhhhhccc---cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceE
Confidence 11 33444332100000 00012345788888999999999999775555532 368
Q ss_pred EEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCCCc-c-----------
Q 046230 273 IYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCPAH-L----------- 338 (489)
Q Consensus 273 li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~~~-~----------- 338 (489)
+++|.+|++|.+ ..++...++|++..|++|++| +.| |+++.++++.+.+.....+. .
T Consensus 233 v~vDaaQ~~g~~---------piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~ 303 (805)
T PLN02724 233 VLLDAAKGCGTS---------PPDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFV 303 (805)
T ss_pred EEeehhhhcCCC---------CCChhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEeccccee
Confidence 999999997743 334433456999999999998 667 99999988877665321111 0
Q ss_pred ---------c-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-------CeeeCCC-----
Q 046230 339 ---------Y-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-------FEVLGDN----- 396 (489)
Q Consensus 339 ---------~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~v~~~~----- 396 (489)
| ..+.|.+..+++.++|+++... ..+...++..++.+++.+.|+++. +.++++.
T Consensus 304 ~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~i----g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~ 379 (805)
T PLN02724 304 KRRERVEQRFEDGTISFLSIAALRHGFKLLNRL----TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLE 379 (805)
T ss_pred eccccHHHHhcCCCcchhHHHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCC
Confidence 0 1145666777788888887421 346777888999999999999873 5566542
Q ss_pred ---CCCeEEEEeCCCC----cHHHHHHHHhhCCceEEeecCCCcC--------------------------------CCC
Q 046230 397 ---DSPVMPIMLYNPA----KIPAFSRECLRQNVAVVTVAFPATP--------------------------------LLL 437 (489)
Q Consensus 397 ---~~~~~~~~~~~~~----~~~~~~~~l~~~Gi~v~~~~~p~~~--------------------------------~~~ 437 (489)
.++++.+.+.... ...++...+.++||.++...+.+.+ ...
T Consensus 380 ~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~ 459 (805)
T PLN02724 380 FHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPT 459 (805)
T ss_pred cccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCccc
Confidence 4677776665322 2233444445569999875554421 013
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 438 ARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.+|+++...+|.+|+|++++.|++..-.
T Consensus 460 G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 460 GAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred ceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999997644
No 324
>PRK04311 selenocysteine synthase; Provisional
Probab=99.80 E-value=1.5e-16 Score=163.17 Aligned_cols=326 Identities=18% Similarity=0.166 Sum_probs=202.9
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCC-cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEE
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG-TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLII 189 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g-~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl 189 (489)
+|-+.-++++.+++.+.+..|.... .....| ..+.+..+++.+|+++|.++++++++|+.|+..++.++ .+|+.|+
T Consensus 93 lg~s~l~~~v~eav~~~~~~~~~le--~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l-~~GdeVI 169 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARGYSNLE--YDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNAL-AAGKEVI 169 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhcccccc--cchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHh-CCCCEEE
Confidence 3444346788888888887764211 000001 13445789999999999999999999999987777654 6788888
Q ss_pred EcCCCchH------HHHHHHhcCCeEEEecCC---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC--CCC--CC
Q 046230 190 SDSLNHNS------IVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS--MEG--EL 256 (489)
Q Consensus 190 ~~~~~h~~------~~~~~~~~g~~~~~~~~~---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s--~~G--~~ 256 (489)
+....|.. +...++..|++++.++++ ++++++++|.+ ++.+|+++...+ +.| ..
T Consensus 170 vs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~-------------~TklV~~vh~sN~~i~G~~~~ 236 (464)
T PRK04311 170 VSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINE-------------NTALLLKVHTSNYRIEGFTKE 236 (464)
T ss_pred EcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCc-------------cCeEEEEEcCCCccccccCCc
Confidence 87654432 223456789999888864 66778877754 334555554444 455 46
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCc----cccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHH
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG----VCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLK 331 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~----~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~ 331 (489)
.++++|+++|++||+++|+|.+++ .++..+.. .......-..++|+++.|.+|.+|++. |++++++++++.++
T Consensus 237 ~dl~eI~~lak~~gi~vivD~gsG--~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~ 314 (464)
T PRK04311 237 VSLAELAALGKEHGLPVVYDLGSG--SLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLK 314 (464)
T ss_pred CCHHHHHHHHHHcCCeEEEECCCc--ccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHh
Confidence 799999999999999999999644 44432211 000111111345999999999997654 99999999998876
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCc-------hHHHHHHHHHHHHHHHHHHHHhC---CC--eeeCC----
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVILGEDGSS-------RGAQKLARIRENSNFFRSELQKM---GF--EVLGD---- 395 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~-------~~~~~~~~~~~~~~~l~~~L~~~---g~--~v~~~---- 395 (489)
.... .-.....-..+++..++|..+....... ....+.+++.++++.+.+.|+.. ++ .+...
T Consensus 315 ~~~~--~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ 392 (464)
T PRK04311 315 KHPL--KRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQV 392 (464)
T ss_pred hchh--HHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCcc
Confidence 3221 1111133344555555555332100000 02233466777788888888765 22 33322
Q ss_pred -------CCCCeEEEEeCC-CCcHHHHHHHHhhC--CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 396 -------NDSPVMPIMLYN-PAKIPAFSRECLRQ--NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 396 -------~~~~~~~~~~~~-~~~~~~~~~~l~~~--Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
..-|-+.+.+.. .....++.++|++- .|+.+ ...+.+.+-+- ++.++|++.++++|.+++.
T Consensus 393 gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r--------~~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 393 GGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR--------IEDGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred CCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE--------EECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 001223333322 33567888888875 45444 23466777763 6789999999999988753
No 325
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.80 E-value=3.8e-17 Score=163.82 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=198.5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH----hcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~L 220 (489)
++-...|+++||++-|.+.+++++||..|..+++.++.++||.|+.....|+.+..-++ ..|..+..++..|++++
T Consensus 54 nPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l 133 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEAL 133 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHH
T ss_pred cccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHH
Confidence 46678999999999999999999999999988999999999999999988888765544 35899999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC-cEEEEEcccccccccCCCCccccccCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK-AYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~-~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
+++++. ++.+|++|.+.|+...+.++++|+++|+++| +++++|...+.+.+ +..+..
T Consensus 134 ~~~l~~-------------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-------~~pL~~-- 191 (386)
T PF01053_consen 134 EAALRP-------------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN-------QNPLEL-- 191 (386)
T ss_dssp HHHHCT-------------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-------C-GGGG--
T ss_pred Hhhccc-------------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-------eccCcC--
Confidence 999875 5678999999999999999999999999998 99999999873211 112222
Q ss_pred CCccEEEcccccccCCcc----eEEEeC--HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGS--KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~--~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
++||++.|.+|.+++.| |+++.+ +++.+.++.... .++..++|..+..++..|+.+ .-++++
T Consensus 192 -GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~--~~G~~~~p~da~ll~rgl~Tl---------~~R~~~ 259 (386)
T PF01053_consen 192 -GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR--LLGATLSPFDAWLLLRGLRTL---------PLRMER 259 (386)
T ss_dssp -T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH--HHT-B--HHHHHHHHHHHTTH---------HHHHHH
T ss_pred -CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh--hcCccchHHHHHHHhcCCCcH---------HHHHHH
Confidence 24999999999998666 888865 477777665442 355668898888888888754 778999
Q ss_pred HHHHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCCCC-cHHHHHHHHhhC--CceEEe----e
Q 046230 374 IRENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYNPA-KIPAFSRECLRQ--NVAVVT----V 428 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~~~-~~~~~~~~l~~~--Gi~v~~----~ 428 (489)
..+++..+.+.|++.. +. | ++ ...+.++.+.+.... ....|.+.|.-- +..+.. +
T Consensus 260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi 339 (386)
T PF01053_consen 260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLI 339 (386)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EE
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCccccc
Confidence 9999999999999872 21 2 11 123457888887664 455666665421 111100 1
Q ss_pred cCCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 429 AFPAT--------------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 429 ~~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
..|.. ....+.+|+++.. ||.+.+++.|+++++
T Consensus 340 ~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 340 SHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp EETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred ccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 11211 1224689999863 667777777777764
No 326
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.7e-17 Score=166.47 Aligned_cols=211 Identities=19% Similarity=0.199 Sum_probs=161.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
++...++|+++|++.|.+.+++++||++|+..++.++.++||.|++....|+++...+ ...|++++.++.+|++++
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l 142 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGW 142 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 3557899999999999989999999999998888888899999999999998765543 336899999988899999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+++|+. ++.+|+++.+.+++|.+.++++|.++|+++|+++|+|.+|+.+.+.. ... .
T Consensus 143 ~~~i~~-------------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~-------pl~---~ 199 (433)
T PRK08134 143 RAAIRP-------------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR-------PFE---H 199 (433)
T ss_pred HHhcCC-------------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-------chh---c
Confidence 988864 34567888889999999999999999999999999999998553311 111 2
Q ss_pred CccEEEcccccccCCcc----eEEEeCHH--------------------------------HHHHHHhhCCCcccccCCC
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSKE--------------------------------LIQYLKYTCPAHLYATSIS 344 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~~--------------------------------~~~~l~~~~~~~~~~~~~~ 344 (489)
++|+++.|.+|.+++.| |+++.... +....+... ...++..++
T Consensus 200 GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~G~~ls 278 (433)
T PRK08134 200 GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREG-LRDFGACLS 278 (433)
T ss_pred CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHH-HHhcCCCCC
Confidence 34999999999998776 55543211 000011000 012344588
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
|..++.++..|+.+ +.+.++..++...+.+.|++.
T Consensus 279 ~~~A~l~~~gL~tl---------~~R~~~~~~nA~~la~~L~~~ 313 (433)
T PRK08134 279 PMNAWQLLQGIETL---------PLRMERHVANTRKVVAFLASH 313 (433)
T ss_pred HHHHHHHhcCCCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 88888888877754 778888899999999999876
No 327
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=3e-18 Score=167.64 Aligned_cols=221 Identities=21% Similarity=0.193 Sum_probs=157.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH--------- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--------- 214 (489)
.....++++.+|+++|.++.+++++|+ +++..++.+++++||.|+++.+.|.++..++...|+.++.++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~ 137 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIA 137 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcC
Confidence 344688999999999998888766665 5678888899999999999999999999999999998877642
Q ss_pred --CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccc
Q 046230 215 --NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVC 292 (489)
Q Consensus 215 --~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~ 292 (489)
.|++++++.+++. ++.++++++.+ +.+|.+.++++|+++|+++|+++|+||+|+.. +...+....
T Consensus 138 ~~i~~~~l~~~l~~~----------~~~k~v~l~~p--~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~-~~~~~~~~~ 204 (294)
T cd00615 138 GGIPPETFKKALIEH----------PDAKAAVITNP--TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAH-FRFHPILPS 204 (294)
T ss_pred CCCCHHHHHHHHHhC----------CCceEEEEECC--CCCCEecCHHHHHHHHHhcCCeEEEECcchhh-hccCcccCc
Confidence 2688899888652 23455666654 45899999999999999999999999999822 111121110
Q ss_pred cccCCCCCCccEEEcccccccCCc--ceEEEeCHHH--HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHH
Q 046230 293 ELLEVDTADVDIMMGTFTKSFGSC--GGYIAGSKEL--IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGA 368 (489)
Q Consensus 293 ~~~~v~p~~~Di~~~t~sK~~g~~--GG~i~~~~~~--~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (489)
.. ...++|+++.|++|++++. ||++..+.+. .+.+..... ...+++.+.+.+++..++++.+.. +++
T Consensus 205 ~~---~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~~~ttsps~~~~asl~~a~~~~~~-----~g~ 275 (294)
T cd00615 205 SA---AMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-LHQSTSPSYLILASLDVARAMMAL-----EGK 275 (294)
T ss_pred ch---hhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-HHCCCCcHHHHHHHHHHHHHHHHH-----HhH
Confidence 11 1134599999999999753 3555444332 122222111 112345677778888888887632 456
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 046230 369 QKLARIRENSNFFRSELQK 387 (489)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~~ 387 (489)
+.++++.++.+++++.|.+
T Consensus 276 ~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 276 ELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7888899999999998763
No 328
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.79 E-value=2.6e-16 Score=160.91 Aligned_cols=321 Identities=19% Similarity=0.212 Sum_probs=198.2
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCC-cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEE
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG-TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLII 189 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g-~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl 189 (489)
+|.+.-++++.+++.+.++.|+..... ...| ....+..+++.+|+++|.+++++++||++|+..++.+ ..+|+.|+
T Consensus 88 lg~s~l~~~vieAv~~~~~~y~~l~~~--l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVI 164 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARGYSNLEYD--LETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVI 164 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhcccchhcc--ccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEE
Confidence 455545788999999999887521100 0001 2345688999999999999999999999998766654 57788888
Q ss_pred EcCCCch------HHHHHHHhcCCeEEEecCC---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC--cCCCCC--CC
Q 046230 190 SDSLNHN------SIVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG--IYSMEG--EL 256 (489)
Q Consensus 190 ~~~~~h~------~~~~~~~~~g~~~~~~~~~---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~--v~s~~G--~~ 256 (489)
+....|. .+...++..|++++.++++ +++++++++.. ++.+|+++. .+++.| .+
T Consensus 165 vs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~-------------~T~lv~~~h~sN~~~~G~~~~ 231 (454)
T TIGR00474 165 VSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITE-------------NTALLLKVHTSNYRIVGFTEE 231 (454)
T ss_pred ECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCc-------------CCEEEEEEccCcccccCCCCC
Confidence 8776642 2334567789999999874 67788877754 233444443 444567 57
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCC-ccc-c--ccCCCCCCccEEEcccccccCCc-ceEEEeCHHHHHHHH
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR-GVC-E--LLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKELIQYLK 331 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~-~~~-~--~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~~~~~l~ 331 (489)
.++++|+++|++||+++++|.. .|.++..+. +.. + .......++|+++.|.+|++|++ ||++++++++++.++
T Consensus 232 ~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 232 VSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLK 309 (454)
T ss_pred CCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhh
Confidence 8999999999999999999964 345554432 111 1 11111235699988889999765 599999999888765
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHHccCCC-------chHHHHHHHHHHHHHHHHHHHHhC---CC--eeeCCC---
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVILGEDGS-------SRGAQKLARIRENSNFFRSELQKM---GF--EVLGDN--- 396 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~-------~~~~~~~~~~~~~~~~l~~~L~~~---g~--~v~~~~--- 396 (489)
.... .-.....-...++..++|..+.+.... .....+.+++.+++..+.+.|++. ++ .+....
T Consensus 310 ~~~l--~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ 387 (454)
T TIGR00474 310 KNPL--TRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQV 387 (454)
T ss_pred hchh--HHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcc
Confidence 3221 111112223344444444433210000 011223446666777777777653 22 232221
Q ss_pred -C-------CCeEEEEeC-CCCcHHHHHHHHhhCC--ceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 397 -D-------SPVMPIMLY-NPAKIPAFSRECLRQN--VAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 397 -~-------~~~~~~~~~-~~~~~~~~~~~l~~~G--i~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
+ -|-+.+.+. ......++.++|++.. |+.+ ...+.+.+-+- ++.++|++.++++|
T Consensus 388 ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r--------~~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 388 GGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR--------IEDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred cCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE--------EECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 0 122333332 2335678888888775 4443 23456777763 67888998888776
No 329
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.79 E-value=2.2e-17 Score=165.78 Aligned_cols=313 Identities=14% Similarity=0.111 Sum_probs=199.9
Q ss_pred CCCCCCccchHHHHHHHHHhCCCCCCcccCCC-----cchhHHHHHHHHHHHhCC--CCEEEe--CccHHHHHHhHhhhc
Q 046230 112 GFAASDEYCTPRVIESLKKYSPSTCSSRVDGG-----TLMVHNELEECVARFVGK--PAAIVF--GMGYVTNSAILPVLM 182 (489)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~--~~~i~~--~sG~~a~~~~~~al~ 182 (489)
|-..-++.|.+|+.+.+.+++ +.+......+ ..+...+.++.++++++. +..++| +|||++..+++..+.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~ 84 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL 84 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC
Confidence 334347889999998887765 3221111111 126678899999999995 344555 347788777777776
Q ss_pred C---CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHH-HHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 183 R---KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLE-EVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 183 ~---~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le-~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
. +++.|+.....|.+ ...++..|.+++.++.+ +..+++ ..+. ++.+ +|.+....+.
T Consensus 85 ~~~~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~------------~~~~-lV~~~h~~t~ 150 (355)
T cd00611 85 GDKGTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA------------PDAA-YVHYCSNETI 150 (355)
T ss_pred CCCCeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC------------CCCC-EEEEeCCccc
Confidence 5 56666653332222 23445668877777643 212222 1111 1233 4555566666
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHH
Q 046230 253 EGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLK 331 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~ 331 (489)
+|.+. -++++.||+++++|.++++|.. . ++.++.|+.+.+-.|.+|++| |+++.++++.+.+.
T Consensus 151 tG~~~-----~~i~~~~g~~~~VDa~qs~g~~---------~--idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~ 214 (355)
T cd00611 151 HGVEF-----DEVPDTGGVPLVADMSSNILSR---------P--IDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKAR 214 (355)
T ss_pred ccEEc-----ceecccCCCeEEEEccccccCC---------C--CCHHHhCEEEeecccccCCCceEEEEECHHHHhhcc
Confidence 77762 2455669999999999997743 2 333334566657899999999 99999998887654
Q ss_pred hhCCCcc----------cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe-eeC--CCC
Q 046230 332 YTCPAHL----------YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE-VLG--DND 397 (489)
Q Consensus 332 ~~~~~~~----------~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-v~~--~~~ 397 (489)
....... ...+.|-....+..++|+++..+ +..+.+.++.+++.+++++.|+++ |+. ... ..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~---gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 215 KITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQ---GGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred cCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 3211100 01234556778888999998531 136788899999999999999999 852 211 123
Q ss_pred C-CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 398 S-PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 398 ~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+ .++.+.+.......++...+.++|+. .+.+.. ..+.+|+++...+|++|||+++++|+++
T Consensus 292 s~~vvsf~~~~~~l~~~~~~~~~r~G~~-~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 292 SRMNVPFRLGKEELEKEFLKEAEAAGMI-GLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CceEEEEEcCChhhhHHHHHHHHHCCCc-ccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4 34566554431224555677888997 433221 1367999999999999999999999875
No 330
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.78 E-value=1.1e-16 Score=159.69 Aligned_cols=312 Identities=13% Similarity=0.087 Sum_probs=204.5
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCC-Ccc---hhHHHHHHHHHHHhCCC---CEEEe-CccHHHHHHhHhhhcCCCCEE
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDG-GTL---MVHNELEECVARFVGKP---AAIVF-GMGYVTNSAILPVLMRKGSLI 188 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~-g~~---~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~~~al~~~g~~V 188 (489)
|..+++++.+.+..+.....+..... -.. ++..++++.|+++++.+ +.+++ +|||.++.+++..+..+++.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~ 83 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVA 83 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeE
Confidence 45788888888886652221211111 112 66788999999999852 34555 558888888888887777654
Q ss_pred EE-cCCCchH-HHHHHHhcCCeEEEec------CCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH
Q 046230 189 IS-DSLNHNS-IVNGARGSGATIRVFQ------HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP 260 (489)
Q Consensus 189 l~-~~~~h~~-~~~~~~~~g~~~~~~~------~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~ 260 (489)
+. ....|+. ....++..|+ +..+. ..+..+++..... ++.+ +|.+-..-+.+|...+
T Consensus 84 l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~v~~th~ETstGv~~~-- 148 (349)
T TIGR01364 84 DYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS-----------EDAA-YVHYCANETIHGVEFR-- 148 (349)
T ss_pred EEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC-----------CCCC-EEEEcCCCCcccEecc--
Confidence 43 3444443 2344556677 54443 3344444432211 1233 4444444455777655
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCC----
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCP---- 335 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~---- 335 (489)
++++.+++++++|.++++|+. .++.++.|+++.|..|++|++| |+++.++++++.+.....
T Consensus 149 ---~l~~~~~~l~iVDavss~g~~-----------~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~ 214 (349)
T TIGR01364 149 ---ELPDVKNAPLVADMSSNILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLN 214 (349)
T ss_pred ---eecccCCCeEEEEccccccCc-----------cCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcch
Confidence 677789999999999997743 2333445799999999999999 999999998876543211
Q ss_pred -------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC---CCC-CeEEE
Q 046230 336 -------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD---NDS-PVMPI 403 (489)
Q Consensus 336 -------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~---~~~-~~~~~ 403 (489)
...+ .+.|-....+..++|+.+..+ +..+++.++.+++.+++++.|+++ |+..... .++ .++.+
T Consensus 215 ~~~~~~~~~~~-~Tp~~~~i~al~~al~~l~~~---gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf 290 (349)
T TIGR01364 215 YKIHAENDSMY-NTPPTFAIYVSGLVFKWLKEQ---GGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVF 290 (349)
T ss_pred HHHHHhcCCCC-CCCcHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEE
Confidence 1111 135566777888899998531 137889999999999999999999 5644321 234 34555
Q ss_pred EeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 404 MLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.......++...+.++|+.+. .+.. ..+.+|+++...+|++|||+++++|+++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~Gi~~~-~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 291 TLGNEELEKRFLKEAEERGLVSL-KGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ecCChhHhHHHHHHHHHCCCccc-CCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 55433223567678888999443 2221 1257999999999999999999999987653
No 331
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.78 E-value=4.8e-17 Score=161.68 Aligned_cols=329 Identities=21% Similarity=0.268 Sum_probs=192.3
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHH----HHHHHHHHhCCC----CE-EEeC
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNE----LEECVARFVGKP----AA-IVFG 168 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~----~~-i~~~ 168 (489)
++.||| .|-|+. .|.+.++..-.+.. |..+..+.|...|+ +...+ ..+++.++++.+ .+ +-.-
T Consensus 20 ~~~l~LiaSEN~~-----Sp~v~~al~S~l~nkyaeg~pg~ryy~G~-~~id~iE~la~~ra~~lF~~~~~~w~anvqp~ 93 (399)
T PF00464_consen 20 RSTLNLIASENYM-----SPAVREALGSDLTNKYAEGYPGKRYYGGC-EYIDEIEELAIERAKELFGAEPKEWYANVQPH 93 (399)
T ss_dssp HHSEE-CTT----------HHHHHHHTSGGGGS-TTEETTEESSSST-HHHHHHHHHHHHHHHHHHT-STTTEEEE---S
T ss_pred hcCccccCccccc-----CHHHHHHhCCcceeeccccCCCcccccCc-chhhHHHHHHHHHHHHHhCCCcccceEEeecC
Confidence 557777 333332 34444444433332 44444445544444 33333 345556677876 33 3458
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH-HH---------HhcCCeEEEecCC------CHHHHHHHHHHHHhcCC
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVN-GA---------RGSGATIRVFQHN------TPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~-~~---------~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~ 232 (489)
||+.||.+++.++++|||.|+.-...|+.... +. ....-....++.+ |++++++++++.
T Consensus 94 SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~----- 168 (399)
T PF00464_consen 94 SGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEH----- 168 (399)
T ss_dssp SHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-----
T ss_pred CchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhc-----
Confidence 99999999999999999999977666543321 10 1112344555433 899999999885
Q ss_pred CCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccc
Q 046230 233 PRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKS 312 (489)
Q Consensus 233 ~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~ 312 (489)
+.+.+|+-.+.|. ...++++++++|++.|++|++|-+|..|.+. .|. ....+ ...|++++|.+|+
T Consensus 169 ------kPklIi~G~S~y~---~~~d~~~~reIad~vga~l~~D~sH~~GLIa-~g~-~~~P~----~~ADvvt~sThKt 233 (399)
T PF00464_consen 169 ------KPKLIICGASSYP---RPIDFKRFREIADEVGAYLMADISHIAGLIA-GGL-FPNPF----PYADVVTGSTHKT 233 (399)
T ss_dssp --------SEEEEE-SSTS---S---HHHHHHHHHHTT-EEEEE-TTTHHHHH-TTS-S--GC----CTSSEEEEESSGG
T ss_pred ------CCCEEEECchhcc---CccCHHHHHHHHHhcCcEEEeccccccccee-hhe-ecCcc----ccceEEEeecccc
Confidence 3444444444443 2467999999999999999999999866442 221 11222 2359999999999
Q ss_pred c-CCcceEEEeC--------------HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 313 F-GSCGGYIAGS--------------KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 313 ~-g~~GG~i~~~--------------~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
| |+.||.|+.+ +++.+.+...-.+..-+ +.+....++...+|...+ ..+..+..+++.+|
T Consensus 234 l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg-~~h~~~iaalAval~ea~----~~~fk~Ya~qVv~N 308 (399)
T PF00464_consen 234 LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQG-GPHMHRIAALAVALKEAL----SPEFKEYAKQVVKN 308 (399)
T ss_dssp G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-S-S--HHHHHHHHHHHHHHT----SHHHHHHHHHHHHH
T ss_pred ccccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCccc-CcchhHHHHHHHHHhccc----CHHHHHHHHHHHHH
Confidence 9 6778999999 78888887654433222 133334444444454432 22568899999999
Q ss_pred HHHHHHHHHhCCCeeeC-CCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCc--CCCCCeEEEeecC----CCC
Q 046230 378 SNFFRSELQKMGFEVLG-DNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPAT--PLLLARARICISA----SHT 449 (489)
Q Consensus 378 ~~~l~~~L~~~g~~v~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~iRi~~~~----~~t 449 (489)
++.|.+.|.+.|+.+.. ..+++++.+.+.. .....++.+.|.+.||.+.....|.. |...+.+||..+. ...
T Consensus 309 Ak~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 309 AKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp HHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred HHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 99999999999999863 4567888887754 34566778888888999987544443 3345789998753 355
Q ss_pred HHHHHHHHHH
Q 046230 450 KEDLIKALEV 459 (489)
Q Consensus 450 ~edid~~l~~ 459 (489)
++|++++.+.
T Consensus 389 e~dm~~iA~~ 398 (399)
T PF00464_consen 389 EEDMKEIAEL 398 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 6776665543
No 332
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=4.3e-17 Score=166.57 Aligned_cols=210 Identities=15% Similarity=0.196 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEec-CCCHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQ-HNTPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~-~~d~~~ 219 (489)
.+...++++.+|++.|.+.+++++||++|+.+++.++.++||.|++....|+++.. .+...|+++..++ .+|+++
T Consensus 68 ~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~ 147 (437)
T PRK05613 68 NPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPES 147 (437)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHH
Confidence 45568999999999999999999999999987788888999999999989988743 3455688988886 457888
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
+++.++. ++.+|+++...+++|.+.|+++|.++|+++|+++|+|.+++.|.+- ... .
T Consensus 148 l~~~l~~-------------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-------~p~---~ 204 (437)
T PRK05613 148 WQAAVQP-------------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-------RPL---E 204 (437)
T ss_pred HHHhCCc-------------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-------ChH---H
Confidence 8887754 3446667888888999999999999999999999999999854321 011 1
Q ss_pred CCccEEEcccccccCCcc----eEEEeCHHH-----------------------------------H-HHHHhhCCCccc
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSKEL-----------------------------------I-QYLKYTCPAHLY 339 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~~~-----------------------------------~-~~l~~~~~~~~~ 339 (489)
.++|+++.|++|.+++.| |+++.+.+. + +...... ...
T Consensus 205 ~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 282 (437)
T PRK05613 205 LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLL--RDT 282 (437)
T ss_pred hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHH--Hhc
Confidence 234999999999998754 767653221 0 0000111 123
Q ss_pred ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 340 ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
+..++|..+..++..|+.+ .-+.++..+++..+.+.|++.
T Consensus 283 G~~~~p~~a~l~~rgl~TL---------~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 283 GATLSPFNAWVTAQGLDTL---------SLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred CCCCCHHHHHHHHcccCcH---------HHHHHHHHHHHHHHHHHHHcC
Confidence 5568999998888887754 678889999999999999986
No 333
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.78 E-value=4.6e-16 Score=161.81 Aligned_cols=340 Identities=14% Similarity=0.143 Sum_probs=207.4
Q ss_pred cccccccCCCCC-CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC---------------CCEEEeC
Q 046230 105 LGSYNYLGFAAS-DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK---------------PAAIVFG 168 (489)
Q Consensus 105 ~~s~~~lg~~~~-~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---------------~~~i~~~ 168 (489)
.+|..|+|+-.. .|....++.+.+..++............+.+..++-+.++++++. ...++.+
T Consensus 87 ~~hP~f~g~~~~~~p~~~~~l~~l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~ts 166 (522)
T TIGR03799 87 TASPSFIGHMTSALPYFMLPLSKLMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCS 166 (522)
T ss_pred CCCCCeEEeccCCCchHHHHHHHHHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcC
Confidence 345555655544 133433333433334433322222223344455555555555531 1246678
Q ss_pred ccHHHHHHhHhhhcC--------------------------CCCEEEEcCCCchHHHHHHHhcCC---eEEEecCC----
Q 046230 169 MGYVTNSAILPVLMR--------------------------KGSLIISDSLNHNSIVNGARGSGA---TIRVFQHN---- 215 (489)
Q Consensus 169 sG~~a~~~~~~al~~--------------------------~g~~Vl~~~~~h~~~~~~~~~~g~---~~~~~~~~---- 215 (489)
+||++|..++.+... ++..|++....|.|+..+++..|. .++.++.+
T Consensus 167 GGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~ 246 (522)
T TIGR03799 167 GGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNR 246 (522)
T ss_pred chHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCc
Confidence 899999443333210 235789999999999999988887 56666654
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 216 -TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 216 -d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
|+++|++.|++...++ .+.++|+.....+.+|.+.|+++|.++|+++|+++++|.+|+.+.+ .....-...
T Consensus 247 ~d~~~L~~~i~~~~~~g-------~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~-~~~~~r~~l 318 (522)
T TIGR03799 247 IDVDALRDKCAELAEQN-------IKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATL-LSNTYRHLL 318 (522)
T ss_pred CCHHHHHHHHHHHHHCC-------CCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHH-hCHHHHHHh
Confidence 8999999998755443 1233333333345689999999999999999999999999983321 000000001
Q ss_pred cCCCCCCccEEEccccccc-CCcc-eEEEeC-HHHHHHHHhhCCC-----------cccccCCCHHHHHHHHHHHHHHHc
Q 046230 295 LEVDTADVDIMMGTFTKSF-GSCG-GYIAGS-KELIQYLKYTCPA-----------HLYATSISPPAAEQIISAIKVILG 360 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~-~~~~~~l~~~~~~-----------~~~~~~~~p~~~aa~~a~L~~i~~ 360 (489)
.++ ..+|.+..+.+|++ ++.| |+++.+ ++..+.+...... +.+..+ -+..+....++|+.+
T Consensus 319 ~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legs-R~~~al~lw~aL~~l-- 393 (522)
T TIGR03799 319 KGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGS-RPGMAMLVYAGLHII-- 393 (522)
T ss_pred cCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecC-cchHHHHHHHHHHHH--
Confidence 233 24599999999966 5556 777654 5565555431100 111111 122233567788877
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC----------------------cHHHHHHH
Q 046230 361 EDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA----------------------KIPAFSRE 417 (489)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 417 (489)
+....++.+++..++.++|.+.|++. +++++.++...++.+.+.... ....+.++
T Consensus 394 --G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~ 471 (522)
T TIGR03799 394 --GRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKR 471 (522)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 33467888999999999999999988 899888776777777653210 11356777
Q ss_pred HhhCCceEEe-ecC-CCc--CCCCCeEEEee-cCCCCHHHHHHHHHH
Q 046230 418 CLRQNVAVVT-VAF-PAT--PLLLARARICI-SASHTKEDLIKALEV 459 (489)
Q Consensus 418 l~~~Gi~v~~-~~~-p~~--~~~~~~iRi~~-~~~~t~edid~~l~~ 459 (489)
+.+.|..... ... +.. ..+...+|+++ +...|++||+.+++.
T Consensus 472 ~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 472 QREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 7788776654 211 111 11235799997 466888999987764
No 334
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=159.59 Aligned_cols=315 Identities=13% Similarity=0.105 Sum_probs=206.0
Q ss_pred CCCCCCccchHHHHHHHHHhCC-CCCCcccCCCc---chhHHHHHHHHHHHhCC-C-C-EEEe-CccHHHHHHhHhhhcC
Q 046230 112 GFAASDEYCTPRVIESLKKYSP-STCSSRVDGGT---LMVHNELEECVARFVGK-P-A-AIVF-GMGYVTNSAILPVLMR 183 (489)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~---~~~~~~l~~~la~~~g~-~-~-~i~~-~sG~~a~~~~~~al~~ 183 (489)
|-..-++.|.+|+.+.+.++.. +.+......-. .++..+.++.++++++. + . .+++ ++|+.++.+++..+..
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~ 89 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG 89 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC
Confidence 3333467888888888765521 11111000111 36788999999999995 2 2 4444 6677777888888877
Q ss_pred CCCEEE-EcCCCchHH-HHHHHhcCCeEEEecCC------CHHHHHH-HHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 184 KGSLII-SDSLNHNSI-VNGARGSGATIRVFQHN------TPSHLEE-VLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 184 ~g~~Vl-~~~~~h~~~-~~~~~~~g~~~~~~~~~------d~~~Le~-~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
+++.++ +....|+.. ...++..|.. ..+... +..++++ .|++ +.+ +|.+-..-+.+|
T Consensus 90 ~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~------------~~~-~V~~th~eTstG 155 (360)
T PRK05355 90 GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD------------DAA-YVHYTSNETIDG 155 (360)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCC------------CCC-EEEEccCCCcce
Confidence 765444 334444432 3345555654 332211 2334444 3432 233 444444555688
Q ss_pred CCC-ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHh
Q 046230 255 ELC-KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKY 332 (489)
Q Consensus 255 ~~~-~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~ 332 (489)
... ++++| +|+++++|.++++|.. . ++.++.|+++.|-.|++|++| |+++.++++++.+..
T Consensus 156 v~~~~i~~i------~g~l~vVDavss~g~~---------~--idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 156 TEFHELPDT------GDVPLVADMSSDILSR---------P--IDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALP 218 (360)
T ss_pred EecCccccc------CCCcEEEEcCccccCc---------c--CCHHHccEEEEeccccccCCceEEEEECHHHHhhccc
Confidence 886 67766 8999999999997743 2 333445799899999999999 999999998877654
Q ss_pred h-C----------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCe-eeCC--CCC
Q 046230 333 T-C----------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFE-VLGD--NDS 398 (489)
Q Consensus 333 ~-~----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-v~~~--~~~ 398 (489)
. . ....+ .+.|-....+..++|+.+..+ +..+++.++.+++.+++++.|+++++. ...+ .++
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~Tp~~~~i~aL~~aL~~i~~~---gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs 294 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMY-NTPPTFAIYLAGLVFKWLKEQ---GGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRS 294 (360)
T ss_pred CCChHHHHHHHHhcCCcc-CCCcHHHHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcC
Confidence 1 1 01111 235667788888999998531 136788999999999999999999753 2121 234
Q ss_pred -CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 399 -PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 399 -~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.++.+.+.......++...+.++|+.+. .+.. ..+.+|+++...+|.+|||+++++|+++++.
T Consensus 295 ~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~-~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 295 RMNVPFTLADEELDKKFLAEAKAAGLVGL-KGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CcEEEEEcCChHHHHHHHHHHHHCCCccc-CCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4566665554334567778888999974 2221 1367999999999999999999999997754
No 335
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.78 E-value=1.5e-16 Score=170.95 Aligned_cols=299 Identities=16% Similarity=0.125 Sum_probs=197.4
Q ss_pred CCCcchhHHHHHHHHHHHhCCCCEEEe-CccHHHHHHhHhhhc--------CCCCEEEEcCCCchHHHHHHHhcCCeEEE
Q 046230 141 DGGTLMVHNELEECVARFVGKPAAIVF-GMGYVTNSAILPVLM--------RKGSLIISDSLNHNSIVNGARGSGATIRV 211 (489)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~~~~al~--------~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~ 211 (489)
..|+.+...++++.+++++|.+.+-+. ++|+.++.+.++++. ..+++|+++...|++....+...|.+++.
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~ 617 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEE
Confidence 456677778999999999999977665 588887755555543 23578899999998777777888999999
Q ss_pred ecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 212 FQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 212 ~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
++.+ |+++|++++++. ..+.++|++....+.++...++++|+++|+++|+++++|.++.++..+.
T Consensus 618 Vp~D~~G~iDle~L~a~I~~~----------~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l 687 (954)
T PRK12566 618 VECDPDGNVDLDDLKAKAAAA----------GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL 687 (954)
T ss_pred eccCCCCCcCHHHHHHHhhcc----------CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC
Confidence 8875 889999988742 1245555555444434445669999999999999999999998554322
Q ss_pred CCCccccccCCCCCCccEEEcccccccCC------cc-eEEEeCHHHHHHHHhhCC----------Ccc-cccCCCHHHH
Q 046230 287 TGRGVCELLEVDTADVDIMMGTFTKSFGS------CG-GYIAGSKELIQYLKYTCP----------AHL-YATSISPPAA 348 (489)
Q Consensus 287 ~G~~~~~~~~v~p~~~Di~~~t~sK~~g~------~G-G~i~~~~~~~~~l~~~~~----------~~~-~~~~~~p~~~ 348 (489)
.- ... -++||+.++++|+|+. +| |.+...+.+...++.... +.+ .....+...+
T Consensus 688 ~~---Pg~-----~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l 759 (954)
T PRK12566 688 AR---PAD-----IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASIL 759 (954)
T ss_pred CC---hhh-----cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHH
Confidence 11 011 2349999999999952 22 666666666655553210 000 1112222233
Q ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCe---EEEEeC-----CCCcHHHHHHHHh
Q 046230 349 EQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-NDSPV---MPIMLY-----NPAKIPAFSRECL 419 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~~~~---~~~~~~-----~~~~~~~~~~~l~ 419 (489)
.++..-+..+ +.+ ..+.......+.+|+.++|.+ ++.+.-. ..+++ +.+.+. ......++.++|+
T Consensus 760 ~~A~~Yi~~l----G~e-Lk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~ 833 (954)
T PRK12566 760 PISWMYIAMM----GPQ-LADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM 833 (954)
T ss_pred HHHHHHHHHH----CHH-HHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH
Confidence 3333333333 222 233333346689999999987 4443222 11221 112221 1144578999999
Q ss_pred hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 420 RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 420 ~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.||......|| ..+.+|++++-..|++|||+++++|..+.++.
T Consensus 834 d~Gihapt~~fP----v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 834 DYGFHAPTMSFP----VPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HCCcEEeEEeec----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 999987755554 25789999999999999999999999988874
No 336
>PLN02263 serine decarboxylase
Probab=99.77 E-value=1.3e-15 Score=154.34 Aligned_cols=290 Identities=13% Similarity=0.053 Sum_probs=198.4
Q ss_pred CcchhHHHHHHHHHHHhCCCC----EEEeCccHHHHHHhHhhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-
Q 046230 143 GTLMVHNELEECVARFVGKPA----AIVFGMGYVTNSAILPVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHN- 215 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~~~~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~- 215 (489)
++.++..++-+.+++++|.+. .++.++||++|..++.+... +..+++++...|.|+..++++.|.+++.++.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 355566666677777777642 57778889999655555443 34588999999999999999999998888865
Q ss_pred ----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCc-----EEEEEcccccccc-c
Q 046230 216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKA-----YIYLDEAHSIGAV-G 285 (489)
Q Consensus 216 ----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~-----~li~DEa~s~g~~-g 285 (489)
|+++|++.|.+.. .+.++|+..--.+++|.+.|+++|.++|+++|+ ||++|.+++ ++ -
T Consensus 210 ~g~mD~~aL~~aI~~d~----------~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~G--G~~l 277 (470)
T PLN02263 210 SGEIDCADFKAKLLANK----------DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALF--GLMM 277 (470)
T ss_pred CCcCcHHHHHHHHHhCC----------CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccch--hhHh
Confidence 8999999887631 124444443344578999999999999999997 999999998 32 1
Q ss_pred CCCCccccccCCCCCCccEEEcccccccCCc-c-eEEEeCHHHHHHHHhhCC-----CcccccCCCHHHHHHHHHHHHHH
Q 046230 286 KTGRGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAGSKELIQYLKYTCP-----AHLYATSISPPAAEQIISAIKVI 358 (489)
Q Consensus 286 ~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~~~~~~l~~~~~-----~~~~~~~~~p~~~aa~~a~L~~i 358 (489)
+.-+... .++.. ..+|-+.-+.+|+++.+ + |.++.++..++.+..... ..+...+-+......+..+|+.+
T Consensus 278 Pf~~~~~-~~df~-~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~ 355 (470)
T PLN02263 278 PFVKRAP-KVTFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK 355 (470)
T ss_pred hhccccc-ccCCC-cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHh
Confidence 1111111 12221 22688888999999754 4 877777665544422110 00111112222356667777765
Q ss_pred HccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCC
Q 046230 359 LGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLA 438 (489)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~ 438 (489)
+.+...+.+++..++++++.+.|++.|+.....+.+.++.+. .+. .....+|..+.. ..+
T Consensus 356 ----G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~--~p~------~~~~~~gW~L~~--------~~~ 415 (470)
T PLN02263 356 ----GYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFE--RPK------DEEFVRRWQLAC--------QGN 415 (470)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEe--cCc------hHHhhcceEEcc--------CCC
Confidence 455677888888999999999999999987766666654443 222 112346777662 124
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 439 RARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 439 ~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+++++...++++.+|++++.|.+..+.
T Consensus 416 ~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 416 IAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 5999998888999999999999887764
No 337
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=8.4e-16 Score=153.93 Aligned_cols=299 Identities=13% Similarity=0.121 Sum_probs=198.9
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH-HHhcCCeEEEecC----------
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG-ARGSGATIRVFQH---------- 214 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~-~~~~g~~~~~~~~---------- 214 (489)
+-..+|++.+++++|.+.++.++||+.|...+..+..++||.| ..++|.....+ +...|+.++-++.
T Consensus 71 ~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~ 148 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNI 148 (450)
T ss_pred CcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCC
Confidence 3347999999999999999999999999644567778999987 55777666555 6777876555521
Q ss_pred ----C-CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC-CCCCC---CChHHHHHHHHHcCcEEEEEccccccc--
Q 046230 215 ----N-TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS-MEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGA-- 283 (489)
Q Consensus 215 ----~-d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s-~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~-- 283 (489)
+ |++.|++.|++.. +....+|.++...+ .+|.. .++++|.++|++||+.||.|.++.+|-
T Consensus 149 p~~GniD~~~Le~aI~~~~---------~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~ 219 (450)
T TIGR02618 149 PFKGNVDLKKLQKLIDEVG---------ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAY 219 (450)
T ss_pred CCCCCcCHHHHHHHhcccc---------CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChh
Confidence 1 7899999887520 11222344443334 34666 458999999999999999999998642
Q ss_pred c------cCCCCcc----ccccCCCCCCccEEEcccccccCCc-ceEEE-eCHHHHHHHHhhCCCc----ccccCCCHHH
Q 046230 284 V------GKTGRGV----CELLEVDTADVDIMMGTFTKSFGSC-GGYIA-GSKELIQYLKYTCPAH----LYATSISPPA 347 (489)
Q Consensus 284 ~------g~~G~~~----~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~-~~~~~~~~l~~~~~~~----~~~~~~~p~~ 347 (489)
| |..+..+ .+.+. ..|.++.|..|.++.+ ||+++ .++++++.++.....+ +++ .++...
T Consensus 220 ~I~~re~g~~~~~i~ei~~e~~~----~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyG-gla~r~ 294 (450)
T TIGR02618 220 FIKEREQGYEDKSIAEILKEMMS----YADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYG-GLAGRD 294 (450)
T ss_pred hhhcccccccCCCHHHHHHHHhc----cCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccC-chhhhh
Confidence 3 2333333 22222 2388888999988655 89998 6788988887653221 122 122223
Q ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC--------CCcHHHHHHHHh
Q 046230 348 AEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN--------PAKIPAFSRECL 419 (489)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ 419 (489)
+.+..-+|+.. ......++-..+.++|.+.|.+.|+++..+.+++.+.+.... .-....++.+|.
T Consensus 295 ~~ala~gL~e~-------~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly 367 (450)
T TIGR02618 295 MEAMAIGIREA-------VDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIY 367 (450)
T ss_pred HHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHH
Confidence 33333344433 223455566667899999999999999877788876665421 123456777776
Q ss_pred hC-CceEEeec------CCCcCCC----CCeEEEeec-CCCCHHHHHHHHHHHHHHHHHh
Q 046230 420 RQ-NVAVVTVA------FPATPLL----LARARICIS-ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 420 ~~-Gi~v~~~~------~p~~~~~----~~~iRi~~~-~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. ||-.+-.+ .|.+... -..+|+++| -.-|.+.+|.+.+++..+.++-
T Consensus 368 ~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 368 VETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred HHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 65 77655422 2222111 257999987 4579999999999999887653
No 338
>PRK15029 arginine decarboxylase; Provisional
Probab=99.76 E-value=3.2e-16 Score=167.32 Aligned_cols=304 Identities=15% Similarity=0.122 Sum_probs=204.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 215 (489)
.....+.++..|+.+|.+...+.++||++ |.+++.+.+++||.|++++.+|-|...++.++|+.++++...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~ 283 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 45567889999999999999999999877 588999999999999999999999999999999999887432
Q ss_pred --C-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCC
Q 046230 216 --T-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTG 288 (489)
Q Consensus 216 --d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G 288 (489)
+ ++.++++|+++...- ... .++..++|++.+.| .|...++++|.++|++++++|++||||+ +.-.-.
T Consensus 284 ~i~~~~~~~e~i~~~l~~~p~~k-~~~-~~~~~avvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhG--ah~~F~ 357 (755)
T PRK15029 284 PIYPQEMQPETLQKKISESPLTK-DKA-GQKPSYCVVTNCTY--DGVCYNAKEAQDLLEKTSDRLHFDEAWY--GYARFN 357 (755)
T ss_pred CCCccccCHHHHHHHHHhCchhh-hcc-ccCceEEEEECCCC--cceeeCHHHHHHHHHhcCCeEEEECccc--cccccC
Confidence 2 788888887642110 000 01234788888877 4889999999999999999999999998 322111
Q ss_pred CccccccCC-----CCCCcc-EEEcccccccCCcc--eEEEeCHH--HH--HHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 289 RGVCELLEV-----DTADVD-IMMGTFTKSFGSCG--GYIAGSKE--LI--QYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 289 ~~~~~~~~v-----~p~~~D-i~~~t~sK~~g~~G--G~i~~~~~--~~--~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
.....+..+ ...+.| +++-|.+|.+++.. +++-.+.. .+ +.++..-. ..-+||.+-+.+|..-.+..
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~-~~qSTSPSY~LmASLD~ar~ 436 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYM-MHATTSPLYAICASNDVAVS 436 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHH-HHcCCCcHHHHHHHHHHHHH
Confidence 111111222 113347 88899999997543 55543221 22 22322211 11245566677777777766
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-C------------------------------------------Ceee
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM-G------------------------------------------FEVL 393 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------------------------------------------~~v~ 393 (489)
.+.+ ..++++.++..+....||+.+.++ + +.+.
T Consensus 437 ~m~~----~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T PRK15029 437 MMDG----NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM 512 (755)
T ss_pred HHhh----hhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeee
Confidence 6631 136778888888888999998776 2 1111
Q ss_pred CCC----C-----------CCeE-EEEe-CCCCc---------HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCC
Q 046230 394 GDN----D-----------SPVM-PIML-YNPAK---------IPAFSRECLRQNVAVVTVAFPATPLLLARARICISAS 447 (489)
Q Consensus 394 ~~~----~-----------~~~~-~~~~-~~~~~---------~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~ 447 (489)
.+. + -|.. .+.. ..... +..+.+.|.++||.+.- .+.+.+-+.++..
T Consensus 513 ~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~-------~~~~~vL~l~s~g 585 (755)
T PRK15029 513 HPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR-------TTDFQIMFLFSMG 585 (755)
T ss_pred cccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCC
Confidence 110 0 0110 1111 01111 23788888778999883 3345677888889
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 046230 448 HTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 448 ~t~edid~~l~~l~~~~~~ 466 (489)
.|++++++++++|.++-+.
T Consensus 586 ~t~~~~~~L~~aL~~~~~~ 604 (755)
T PRK15029 586 VTRGKWGTLVNTLCSFKRH 604 (755)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999987553
No 339
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=3.4e-16 Score=153.21 Aligned_cols=334 Identities=19% Similarity=0.236 Sum_probs=200.6
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcc-cCCCcchhHHHHHHHHHHHhCCC-CEEEeCcc-HHHHHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSR-VDGGTLMVHNELEECVARFVGKP-AAIVFGMG-YVTNSA 176 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~~~ 176 (489)
.-|+|.+ ..+..+|.|.+|+.+.+..+--. ..++ .........++.++.+|++++.+ +.|+|++| |++|..
T Consensus 44 ~vyld~~-----at~p~~~~Vldam~~~~~~~~~n-Ph~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQ-----ATGPMDPRVLDAMLPYLLEYLGN-PHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecC-----cCCCCCHHHHHHHHHHHHHhhcC-CCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 4456644 23334789999999988874211 1122 22223344678899999999975 44777554 666766
Q ss_pred hHhhhc-CCCC----EEEEcCCCchHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 177 ILPVLM-RKGS----LIISDSLNHNSIVNGARG---SGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 177 ~~~al~-~~g~----~Vl~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++.... ..++ .|++-...|.+...+++. .|..++.+|.+ |.+.+++.|+. ++.+
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~-------------~T~l 184 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRS-------------KTRL 184 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCC-------------CceE
Confidence 666543 2333 899999999998877655 47777777665 56666666654 6678
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEe
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAG 322 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~ 322 (489)
|.+..+.++.|...|+++|+++|+++++++++|.+|++|-. ..++..-++|++..+.+|++|++| |++..
T Consensus 185 v~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i---------~vDV~eln~D~~s~s~HK~ygp~~iGaLYv 255 (428)
T KOG1549|consen 185 VSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI---------PVDVQELNADFLSISAHKIYGPPGIGALYV 255 (428)
T ss_pred EEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc---------cccHHHcCchheeeecccccCCCcceEEEE
Confidence 88899999999999999999999999999999999998743 333333345999999999999999 99888
Q ss_pred CHHHHHHHHhhC--------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee
Q 046230 323 SKELIQYLKYTC--------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEV 392 (489)
Q Consensus 323 ~~~~~~~l~~~~--------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v 392 (489)
++. ...++... .++ .+.+.+.+.+...-++.++...+.. ..+. ...+....+..++... ...+
T Consensus 256 r~~-~~~~~~~p~~~GGgq~r~~-rsGT~~~~~~~~~gsA~e~~~~~~~--~~~~---~~~~~~~~ll~~i~~~~~~~~~ 328 (428)
T KOG1549|consen 256 RRK-RPRLRVEPPLSGGGQERGL-RSGTVATPLAVGLGSAAEFVNKEMA--YDEA---IIKRLSEKLLMGIGQSLPEVTL 328 (428)
T ss_pred ccC-CCcccccCcccCCcccccc-ccCCcCchhhhhhHHHHHHHHhhcc--hhHH---HHHHHHHHHHHHHhhhCchhhc
Confidence 761 12222110 011 1112344455555556666532111 1222 2233455555555432 1222
Q ss_pred eCCCCCC---eEEEEeC--CCC-cHHHHHHHHhhCCceEEeec-CCC---------cCCCCCeEEEeecCCCCHHHHHHH
Q 046230 393 LGDNDSP---VMPIMLY--NPA-KIPAFSRECLRQNVAVVTVA-FPA---------TPLLLARARICISASHTKEDLIKA 456 (489)
Q Consensus 393 ~~~~~~~---~~~~~~~--~~~-~~~~~~~~l~~~Gi~v~~~~-~p~---------~~~~~~~iRi~~~~~~t~edid~~ 456 (489)
.++..+. ..-+-+. .+. ...+.....+..|..+.... .|. ....+..+||++....|++|++++
T Consensus 329 ~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~ 408 (428)
T KOG1549|consen 329 NGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYL 408 (428)
T ss_pred cCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHH
Confidence 2222110 0111111 001 11111111122222222110 000 013457899999999999999999
Q ss_pred HHHHHHHHHHhC
Q 046230 457 LEVISRVGDLVG 468 (489)
Q Consensus 457 l~~l~~~~~~~~ 468 (489)
.+.+.+.++.+.
T Consensus 409 ~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 409 VDAIKKLVSLLR 420 (428)
T ss_pred HHHHHHHHHhcc
Confidence 999999887653
No 340
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.76 E-value=1.2e-16 Score=160.42 Aligned_cols=289 Identities=13% Similarity=0.052 Sum_probs=190.3
Q ss_pred chhHHHHHHHHHHHhCCC--CEEEe--CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh---cCCeEEEecCCCH
Q 046230 145 LMVHNELEECVARFVGKP--AAIVF--GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG---SGATIRVFQHNTP 217 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~~i~~--~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~---~g~~~~~~~~~d~ 217 (489)
.+...+.++.++++++.+ ..++| +|||.+..+++..+..++ .+++....|++.+..... ...++..++...-
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~~-~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~ 118 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEKK-SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccccc-ccEEecCHHHHHHHHHHHhhhccCCceEEecCCC
Confidence 577788999999999973 24554 457888777777766433 334445666654433222 1224444443322
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC
Q 046230 218 SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV 297 (489)
Q Consensus 218 ~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v 297 (489)
+.++..+. .+..+|.+...-+.+|.+.|+++| ++++|+++++|.++++|.. ..++
T Consensus 119 ~~~~~~~~-------------~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~---------~idv 173 (361)
T TIGR01366 119 SAPEPQAD-------------PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL---------PVDI 173 (361)
T ss_pred CCCCCccC-------------CCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCC---------CCCH
Confidence 22222111 234456666677779999999888 5899999999999997743 3333
Q ss_pred CCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhCCC------cc-------------cccCCCHHHHHHHHHHHH
Q 046230 298 DTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCPA------HL-------------YATSISPPAAEQIISAIK 356 (489)
Q Consensus 298 ~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~~~------~~-------------~~~~~~p~~~aa~~a~L~ 356 (489)
+++|+++.|-.|++|++| ++++.++++++.+.....+ +. ...+.+.....+..++++
T Consensus 174 --~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~ 251 (361)
T TIGR01366 174 --AETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQID 251 (361)
T ss_pred --HHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHH
Confidence 347999999999999876 4456688877766532111 00 011244445557788899
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCC---CCCeEEEEe-CCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGDN---DSPVMPIML-YNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~~---~~~~~~~~~-~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
.++.+ +..+...++.+++.+++++.|++++ +.++... .++.++... .......++.+.|.++||.+.+ ++
T Consensus 252 ~l~~~---gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~-~~- 326 (361)
T TIGR01366 252 WMNGN---GGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTE-PY- 326 (361)
T ss_pred HHHHc---cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeecc-Cc-
Confidence 88532 1256777999999999999999997 4444221 244434333 3344677899999999999864 22
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...+.+.+|+++...+|.+|+++++++|+++++++
T Consensus 327 -~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 327 -RKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred -cccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 12335689999999999999999999999987653
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.76 E-value=7.3e-16 Score=169.68 Aligned_cols=299 Identities=17% Similarity=0.167 Sum_probs=192.2
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEeC-ccHHHHHHhHhhhc----CCC----CEEEEcCCCchHHHHHHHhcCCeEEEec
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVFG-MGYVTNSAILPVLM----RKG----SLIISDSLNHNSIVNGARGSGATIRVFQ 213 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~~~~al~----~~g----~~Vl~~~~~h~~~~~~~~~~g~~~~~~~ 213 (489)
|..+...++++.+++++|.+.+-+.. +|++++.+.+.++. .+| ++|+++...|++....+...|.+++.++
T Consensus 539 G~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~ 618 (954)
T PRK05367 539 GYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEEC
Confidence 45677788999999999998766654 45555533333332 333 4799999999999999999999999987
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC-CCChHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 214 HN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE-LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~-~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
.+ |+++|++.++.. +.+.++|++....+ .|. ..|+++|+++|+++|+++++|.++..+.++..
T Consensus 619 ~d~~G~iD~~~L~~~i~~~----------~~~la~V~it~pst-~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~ 687 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEH----------ADNLAAIMITYPST-HGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLA 687 (954)
T ss_pred CCCCCCcCHHHHHHHHhcc----------CCCeEEEEEEcCCC-CeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCC
Confidence 64 788898888652 12344444433333 244 47899999999999999999999975544322
Q ss_pred CCccccccCCCCCCccEEEcccccccC------Ccc-eEEEeCHHHHHHHHhhCC---Cc--cccc-CCCHH----HHHH
Q 046230 288 GRGVCELLEVDTADVDIMMGTFTKSFG------SCG-GYIAGSKELIQYLKYTCP---AH--LYAT-SISPP----AAEQ 350 (489)
Q Consensus 288 G~~~~~~~~v~p~~~Di~~~t~sK~~g------~~G-G~i~~~~~~~~~l~~~~~---~~--~~~~-~~~p~----~~aa 350 (489)
-. .. .+.|++.++.+|+|+ ++| |++..++.+...+..... .. ..+. ..++. .+..
T Consensus 688 ~p---g~-----~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~ 759 (954)
T PRK05367 688 RP---GD-----IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPI 759 (954)
T ss_pred Ch---hh-----cCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHH
Confidence 10 01 234999999999974 334 788877665544432110 00 0011 11222 1111
Q ss_pred HHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC----CCeEEEE-eCC--CCcHHHHHHHHhhCC
Q 046230 351 IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND----SPVMPIM-LYN--PAKIPAFSRECLRQN 422 (489)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~----~~~~~~~-~~~--~~~~~~~~~~l~~~G 422 (489)
+...+..+ +.+...+..++...+++|+.++|++. ++...++.+ ..++-+. +.. .....++.++|.+.|
T Consensus 760 a~~yi~~~----G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G 835 (954)
T PRK05367 760 SWMYIRMM----GAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYG 835 (954)
T ss_pred HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCC
Confidence 22233332 33344555555568999999999874 222222111 1121111 111 245678999999999
Q ss_pred ceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 423 VAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 423 i~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+......||. .+.++++++-..|++|||++++++..+.+++.
T Consensus 836 ~~~~t~~~pv----~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 836 FHAPTMSFPV----AGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred CeEeecCCcc----CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 9987545542 47899999999999999999999998887764
No 342
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.75 E-value=4.5e-15 Score=149.14 Aligned_cols=297 Identities=13% Similarity=0.134 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH-HHhcCCeEEEe--------------
Q 046230 148 HNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG-ARGSGATIRVF-------------- 212 (489)
Q Consensus 148 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~-~~~~g~~~~~~-------------- 212 (489)
..+|++.+++++|.+.++.++||+.|+..+....+++||.| +..+|.....+ +...|+...-+
T Consensus 80 ~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~ 157 (460)
T PRK13237 80 FYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPF 157 (460)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCC
Confidence 47899999999999999999999999865666668899975 55556665555 66677754433
Q ss_pred cCC-CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccc---
Q 046230 213 QHN-TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAV--- 284 (489)
Q Consensus 213 ~~~-d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~--- 284 (489)
..+ |++.|++.|++.. +.+..++.++ +++..+|... ++++|.++|++||+.||.|.++.+|..
T Consensus 158 tgnlD~d~Le~~I~~~~---------~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI 228 (460)
T PRK13237 158 KGNVDLDKLQALIDEVG---------AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFI 228 (460)
T ss_pred CCCcCHHHHHHHhcccc---------CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhh
Confidence 112 8999999987520 1122223222 2333335554 689999999999999999999987732
Q ss_pred -----cCCCCcc----ccccCCCCCCccEEEcccccccCCc-ceEEEe-CHHHHHHHHhhCCCc----ccccCCCHHHHH
Q 046230 285 -----GKTGRGV----CELLEVDTADVDIMMGTFTKSFGSC-GGYIAG-SKELIQYLKYTCPAH----LYATSISPPAAE 349 (489)
Q Consensus 285 -----g~~G~~~----~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~-~~~~~~~l~~~~~~~----~~~~~~~p~~~a 349 (489)
|..|+.+ .+.+.. .|+++.|++|.++.+ ||+|+. ++++.+.++.....+ +|+ .++---+.
T Consensus 229 ~~re~~y~~~~i~ei~~e~~s~----aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tyg-g~~grd~~ 303 (460)
T PRK13237 229 KEREEGYQDKSIKEIVHEMFSY----ADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYG-GMAGRDME 303 (460)
T ss_pred cccccccCCCcHhHHhhhccCc----CcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCC-ChhhhHHH
Confidence 2333322 122222 388888999999654 788876 578888887653221 222 12221222
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC--------CCCcHHHHHHHHhhC
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY--------NPAKIPAFSRECLRQ 421 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~ 421 (489)
++...|+.. ...+.+++-..+.++|.+.|.+.|+++..+.+++-+.+... ..-....++.+|...
T Consensus 304 alAvgl~E~-------~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~ 376 (460)
T PRK13237 304 AMAIGIEES-------VQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIE 376 (460)
T ss_pred HHHhHHHhh-------chHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence 222233322 22466666677889999999999999988887766555322 112345677777665
Q ss_pred -CceEEee------cCCCcCC----CCCeEEEeec-CCCCHHHHHHHHHHHHHHHHHh
Q 046230 422 -NVAVVTV------AFPATPL----LLARARICIS-ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 422 -Gi~v~~~------~~p~~~~----~~~~iRi~~~-~~~t~edid~~l~~l~~~~~~~ 467 (489)
||-.+-. ..|.+.. .-..+|+++| -.-|.+.+|.+.+++..+.++.
T Consensus 377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 7766532 2222211 1257999987 4579999999999999887653
No 343
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.75 E-value=1.2e-15 Score=165.06 Aligned_cols=300 Identities=17% Similarity=0.146 Sum_probs=204.3
Q ss_pred CCCcchhHHHHHHHHHHHhCCCCEEEe-CccHHHHHHhHhhhc--------CCCCEEEEcCCCchHHHHHHHhcCCeEEE
Q 046230 141 DGGTLMVHNELEECVARFVGKPAAIVF-GMGYVTNSAILPVLM--------RKGSLIISDSLNHNSIVNGARGSGATIRV 211 (489)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~~~~al~--------~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~ 211 (489)
..|..++..++++.|++++|.+.+-+. ++|+.++.+.+.++. .+.++|+++...|++....++..|.+++.
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~ 604 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP 604 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence 345678888999999999999864444 566666654444432 24578999999998888888999999999
Q ss_pred ecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEccccccccc
Q 046230 212 FQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK-FPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 212 ~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~-l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
++.+ |+++|+++++++ + .++++|++....+ .|.+.+ +++|+++|+++|.++++|.++..+..+
T Consensus 605 V~~d~~G~iDle~L~~~i~~~---------~-~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 605 VNCDQDGNIDLVDLKNKAEQH---------G-DELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred eccCCCCCcCHHHHHHHHhhc---------C-CceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 8874 899999999751 1 2455555544444 688877 999999999999999999999754332
Q ss_pred CCCCccccccCCCCCCccEEEcccccccC------Ccc-eEEEeCHHHHHHHHhhCC-------------Ccccc-cCCC
Q 046230 286 KTGRGVCELLEVDTADVDIMMGTFTKSFG------SCG-GYIAGSKELIQYLKYTCP-------------AHLYA-TSIS 344 (489)
Q Consensus 286 ~~G~~~~~~~~v~p~~~Di~~~t~sK~~g------~~G-G~i~~~~~~~~~l~~~~~-------------~~~~~-~~~~ 344 (489)
..- . ...++|++.++.+|+|+ ++| |+++.++++...+..... +.+.+ ...+
T Consensus 674 l~~-----P---g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~ 745 (939)
T TIGR00461 674 LTS-----P---GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGS 745 (939)
T ss_pred CCC-----c---cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCc
Confidence 211 0 11245999999999775 333 999988776554431100 00111 1344
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC-CCCeEE---EEeCC-----CCcHHHHH
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN-DSPVMP---IMLYN-----PAKIPAFS 415 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~-~~~~~~---~~~~~-----~~~~~~~~ 415 (489)
...+..+...|..+ +.+...+..+....+++|+.++|++ ++++.-+. .++.+. +.+.. .....++.
T Consensus 746 a~~~l~a~~yi~~l----G~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIa 820 (939)
T TIGR00461 746 ASILPISWMYIKMM----GNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVA 820 (939)
T ss_pred HHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHH
Confidence 44555555555554 4445566677778899999999987 55554332 223221 12211 24577999
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++|++.|++.....|| . .+.+-++++-..|++|||++++++.++.+++.
T Consensus 821 krL~d~G~hapt~~~p---v-~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 821 KRLQDYGFHAPTLSFP---V-PGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred HHHHhCCeeccccCCc---c-CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999986544444 2 23677888889999999999999988877764
No 344
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.75 E-value=1.7e-16 Score=158.44 Aligned_cols=281 Identities=23% Similarity=0.243 Sum_probs=181.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 215 (489)
.....+.++..|+.+|.++.++.++||++ |.+++.+++++||.|++++.+|-|+..++.++|+.+++++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~ 144 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIG 144 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCcc
Confidence 34457888899999999999999999877 489999999999999999999999999999999998876542
Q ss_pred --CH-----HHHHHHHHHHHhcCCCCCCCCCccE---EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccc
Q 046230 216 --TP-----SHLEEVLREQIAEGQPRTHRPWKKI---MVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVG 285 (489)
Q Consensus 216 --d~-----~~Le~~l~~~~~~g~~~~~~~~~~~---~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g 285 (489)
++ +.++++|+++ |..++ +|++.|.| .|...++++|.++|++++++|++||||+ +.++
T Consensus 145 ~i~~~~~~~~~i~~~l~~~----------p~~k~~~~vvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhG-ah~~ 211 (417)
T PF01276_consen 145 GISPDEFNEEDIEEALKEH----------PDAKAPRLVVLTSPTY--YGVCYDIKEIAEICHKHGIPLLVDEAHG-AHFG 211 (417)
T ss_dssp EB-GGGGSHHHHHHHHHHC----------TTCHCESEEEEESS-T--TSEEE-HHHHHHHHCCTECEEEEE-TT--TTGG
T ss_pred CCChhhhhHHHHHHHHHhC----------ccccCceEEEEeCCCC--CeEEECHHHHHHHhcccCCEEEEEcccc-cccc
Confidence 34 7888888874 34455 88888877 5899999999999999999999999998 1233
Q ss_pred CCCCccccccCCCC----CCccEEEcccccccCCcc--eEEEeCHHH---HHHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 286 KTGRGVCELLEVDT----ADVDIMMGTFTKSFGSCG--GYIAGSKEL---IQYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 286 ~~G~~~~~~~~v~p----~~~Di~~~t~sK~~g~~G--G~i~~~~~~---~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
.. ........+.. +..++++-|.+|.+++.- +++-.+.+. .+.++..- ...-+|+.+-+.+|..-.+.+
T Consensus 212 F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l-~~~~TTSPSY~lmASlD~a~~ 289 (417)
T PF01276_consen 212 FH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL-SMHQTTSPSYPLMASLDVARA 289 (417)
T ss_dssp CS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH-HHHS-SS--HHHHHHHHHHHH
T ss_pred CC-CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH-HHHcCCChHHHHHHHHHHHHH
Confidence 33 21111222222 112399999999997543 666544332 23333321 122345677778887777777
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHh---C-CCeeeCCC-----C-----------------------CCe-EEE
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQK---M-GFEVLGDN-----D-----------------------SPV-MPI 403 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~v~~~~-----~-----------------------~~~-~~~ 403 (489)
.+.+ ..++++.++..++.+.+|+.|++ . ++.+..+. . -|. +.+
T Consensus 290 ~m~~----~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti 365 (417)
T PF01276_consen 290 QMEE----EEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTI 365 (417)
T ss_dssp HHSH----HHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEE
T ss_pred HHhh----hhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEE
Confidence 6621 16788999999999999999943 3 44433221 1 010 112
Q ss_pred Ee----------CCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHH
Q 046230 404 ML----------YNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKE 451 (489)
Q Consensus 404 ~~----------~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~e 451 (489)
.. ........+.+.|.++||.+.-. +.+.+-+-++...|++
T Consensus 366 ~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~-------d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 366 NTPGIDADGELSELGIPGYIVEKYLREHGIQVEKT-------DLYNVLFLFTIGDTKE 416 (417)
T ss_dssp E-STBETTSSB-SS---HHHHHHHHHHTTEE-SEE-------ESSEEEEE--TTS-HH
T ss_pred EccCcCcCCcccccCCCHHHHHHHHHHcCCEEEec-------cCccEEEEecCCCCCC
Confidence 21 11234557889999999887632 2345666666666664
No 345
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.74 E-value=2.5e-15 Score=148.91 Aligned_cols=287 Identities=19% Similarity=0.219 Sum_probs=205.1
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
++-...|++.+|++-|.+.++.|+||..|+..++.++.++||.|++...-|+++..-+ +..|.++..++..+.+++
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~ 141 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEAL 141 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHH
Confidence 4556899999999999999999999999999999999999999999888888765533 346888888877777777
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++.+ .++.+|.+|++.|+.-.+.++++|.++|+++|+++++|..++.+.+-+ .+. -
T Consensus 142 ~~~~~~------------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-------PL~---~ 199 (396)
T COG0626 142 EAAIKE------------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-------PLE---L 199 (396)
T ss_pred HHHhcc------------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-------hhh---c
Confidence 766653 256688899999999999999999999999999999999988443311 221 2
Q ss_pred CccEEEcccccccCCcc----eEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
++||++.|.+|-+++.+ |++++++ ++.+.+..... ...+..++|.-+...+..|+-+ .-+.++..
T Consensus 200 GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~-~~~G~~l~p~dA~l~lRGlkTL---------~~Rm~~~~ 269 (396)
T COG0626 200 GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQR-ANTGAVLSPFDAWLLLRGLRTL---------ALRMERHN 269 (396)
T ss_pred CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHH-hhcCCCCCHHHHHHHHhccchH---------HHHHHHHH
Confidence 35999999999998755 8777654 45554422222 1245568898888888887755 67888999
Q ss_pred HHHHHHHHHHHhCC-Ce-eeCC----------------CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe------ecCC
Q 046230 376 ENSNFFRSELQKMG-FE-VLGD----------------NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT------VAFP 431 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-v~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~------~~~p 431 (489)
+|+..+.+.|++.. +. |+-+ ..+.++.+.+.......+|.+.|.--.+...- +.+|
T Consensus 270 ~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~p 349 (396)
T COG0626 270 ENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHP 349 (396)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcccccccc
Confidence 99999999998862 21 2111 14567777776653345555554422211111 2233
Q ss_pred Cc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 432 AT--------------PLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 432 ~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++ ....+.+|+++.. ||++.+++-|+++++.+
T Consensus 350 a~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 350 ATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred cccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 21 1235789999964 66666777777766543
No 346
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=1.2e-15 Score=153.46 Aligned_cols=277 Identities=15% Similarity=0.177 Sum_probs=189.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH----HHHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~L 220 (489)
++...+||++++++.|.+.++.++||+.|+..++.++.++||.|++....|+.+. ..+...|+++..++.++.+.+
T Consensus 63 ~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~ 142 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSL 142 (384)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhe
Confidence 4666899999999999999999999999998888888999999998877666554 344556889888877655554
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+ ++. .+..+|++|.+.++++.+.++++|.++|++++ +++|.+++.+.. ++ ..+.
T Consensus 143 ~--l~~------------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~---~~----pl~~--- 196 (384)
T PRK06434 143 D--FDP------------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN---QN----PLDL--- 196 (384)
T ss_pred e--ecC------------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc---CC----chhc---
Confidence 4 221 24557888999999999999999999999998 467999853222 11 1222
Q ss_pred CccEEEcccccccCCc----ceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..|+++.|.+|.+++. ||+++. ++++.+.++.... .++..++|..++.++..|+.+ +.++++..
T Consensus 197 gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~--~~G~~~~~~~A~l~~~gL~tL---------~~R~~r~~ 265 (384)
T PRK06434 197 GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK--TLGSNPDPIQAYLALRGLKTL---------GLRMEKHN 265 (384)
T ss_pred CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhCCCcH---------HHHHHHHH
Confidence 3499999999999653 377766 5666666654322 234557888888888877754 77889999
Q ss_pred HHHHHHHHHHHhCC-Ce-e-eC---------CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe---------ecCCCc-
Q 046230 376 ENSNFFRSELQKMG-FE-V-LG---------DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT---------VAFPAT- 433 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-v-~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~---------~~~p~~- 433 (489)
++...+.+.|+... +. | ++ ...+.++.+.+.......+|.+.| .+.... +..|..
T Consensus 266 ~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l---~l~~~~~slG~~~sl~~~p~~~ 342 (384)
T PRK06434 266 KNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNL---EIPMVAASLGGVESLITLPVET 342 (384)
T ss_pred HHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhC---CcceEccCCCCCCeeeECCCcc
Confidence 99999999999762 21 1 11 123567777775322233444433 322111 111211
Q ss_pred -------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 434 -------------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 434 -------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
....+.|||++.. ||.+.+++-|+++++
T Consensus 343 ~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 343 SHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred ccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1124689999964 556666777766653
No 347
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=4e-15 Score=137.03 Aligned_cols=347 Identities=13% Similarity=0.142 Sum_probs=212.5
Q ss_pred cCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHH------hCCCCCCcccCCCcchhHHHHHHHHHHHhC
Q 046230 87 NDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKK------YSPSTCSSRVDGGTLMVHNELEECVARFVG 160 (489)
Q Consensus 87 ~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~------~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 160 (489)
+|-++.++..| .|++++.|+.-. |++.+..++...+ ++...|.+....|...+...|.+.+-+-+|
T Consensus 21 dDl~d~Lrt~g----~imLggGNPa~i----Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 21 DDLNDGLRTPG----AIMLGGGNPARI----PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHhhccCCC----ceeeCCCCcccC----hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 34445554333 777775554443 4666666665554 222334444445665555555555555555
Q ss_pred C---CCEEEeCccHHHH-HHhHhhhcCC------CCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------------CH
Q 046230 161 K---PAAIVFGMGYVTN-SAILPVLMRK------GSLIISDSLNHNSIVNGARGSGATIRVFQHN-------------TP 217 (489)
Q Consensus 161 ~---~~~i~~~sG~~a~-~~~~~al~~~------g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------------d~ 217 (489)
. ++.|..|+||+.. .-++..+.++ +.+++--.|.|-.+... -+-+-..+.++.+ |.
T Consensus 93 wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~-~l~~d~fVs~kP~iel~~~g~FKY~vDF 171 (417)
T COG3977 93 WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA-GLEEDLFVSAKPNIELLPAGQFKYHVDF 171 (417)
T ss_pred CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccc-ccCccceeeccCCcccccccceeeccCH
Confidence 3 5889999999987 5565555432 22344445555544322 1112222222222 55
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 218 SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 218 ~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
++|+- ...+.+|++.-..+++|.+. .+.+|-+++++||+.||.|.+|+.- ..+- . +
T Consensus 172 ~~l~i---------------~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P---FP~i-i--f 230 (417)
T COG3977 172 EHLHI---------------GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP---FPGI-I--F 230 (417)
T ss_pred HHccc---------------ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC---CCce-e--c
Confidence 54432 13677888888889999873 4889999999999999999999722 1111 1 1
Q ss_pred cCCCC--CCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccc-ccCCCHHHHHHHHHHHHHHHccCCCchHH
Q 046230 295 LEVDT--ADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLY-ATSISPPAAEQIISAIKVILGEDGSSRGA 368 (489)
Q Consensus 295 ~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (489)
.++.| .+.-|++.|+||. |.+| |.+++++++++.+......... .+.+-|..++-++..=+.++= ..+-..+
T Consensus 231 sd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rl-seqVIrP 308 (417)
T COG3977 231 SDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRL-SEQVIRP 308 (417)
T ss_pred ccccccCCCCEEEEeehhhc-CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHH-HHHhhhH
Confidence 11211 2335777899995 7778 9999999999999865542221 123444444433332222100 0000123
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecC--CCc----CCCCCeEE
Q 046230 369 QKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAF--PAT----PLLLARAR 441 (489)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~--p~~----~~~~~~iR 441 (489)
-.+++++...+.+++.|-+..+.+..+.+.-++|+++.+ |....++.++|.++|++++|..+ |.. |..+..+|
T Consensus 309 FY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~R 388 (417)
T COG3977 309 FYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMR 388 (417)
T ss_pred HHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEE
Confidence 344555666666777776667777777777777777754 66788999999999999999443 332 34466899
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 442 ICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 442 i~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++ .-+++.|+..+.+|.+.+++.
T Consensus 389 mn~--~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 389 MNY--VPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred Eec--CCCHHHHHHHHHHHHHHHHHH
Confidence 987 788999999999999888765
No 348
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.72 E-value=3e-14 Score=132.14 Aligned_cols=316 Identities=18% Similarity=0.208 Sum_probs=216.7
Q ss_pred cchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--C-EEEeCccHHHHHHhHhhhcCCCCEEEEcCC-C
Q 046230 119 YCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--A-AIVFGMGYVTNSAILPVLMRKGSLIISDSL-N 194 (489)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~-~ 194 (489)
.+..++.+++..-..+..++- ..++..++.+-+...+... . .++-++|+.+..+++--+..|||.|++-.. .
T Consensus 27 nl~~~V~~A~~~~~lgh~sPe----~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~ 102 (385)
T KOG2862|consen 27 NLSGRVQEAMSRPSLGHMSPE----FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGT 102 (385)
T ss_pred CCCHHHHHhhcCCccccCCHH----HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEech
Confidence 345556666655333332222 2344566777776666543 2 334478888887777777779998876543 3
Q ss_pred chHH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-hHHHHHHHH
Q 046230 195 HNSI-VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK-FPEIIAICK 267 (489)
Q Consensus 195 h~~~-~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~-l~~i~~l~~ 267 (489)
++.. ....+..|+++.+++.+ .++++++.|.++ ..++++++ ..-+.+|...+ ++..-++|+
T Consensus 103 wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh-----------~p~~vfv~-hgdsSTgV~q~~~~~~g~lc~ 170 (385)
T KOG2862|consen 103 WGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQH-----------KPKAVFVT-HGDSSTGVLQDLLAISGELCH 170 (385)
T ss_pred HHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhc-----------CCceEEEE-ecCccccccchHHHHHHHHhh
Confidence 4433 34457779999888655 688888888874 34444444 44566899988 788899999
Q ss_pred HcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC-cc-eEEEeCHHHHHHHHhhCCC---------
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-CG-GYIAGSKELIQYLKYTCPA--------- 336 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-~G-G~i~~~~~~~~~l~~~~~~--------- 336 (489)
+|+++|++|-+-|+|+. .|-.+..++|+....--|++|+ +| +.|..++...+.++.....
T Consensus 171 k~~~lllVD~VaSlggt---------~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~ 241 (385)
T KOG2862|consen 171 KHEALLLVDTVASLGGT---------EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDIL 241 (385)
T ss_pred cCCeEEEEechhhcCCc---------cceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHH
Confidence 99999999999998854 3444555668888788899964 46 8888888888887654430
Q ss_pred ------------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC---C-e
Q 046230 337 ------------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS---P-V 400 (489)
Q Consensus 337 ------------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~---~-~ 400 (489)
-.|..+.+-.......++|+.|..+ ..++..++.++++++++..|+++|+........ | +
T Consensus 242 ~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee----GL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptv 317 (385)
T KOG2862|consen 242 RLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE----GLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTV 317 (385)
T ss_pred hhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcc
Confidence 0111124445567778888888432 678999999999999999999998875433222 1 3
Q ss_pred EEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecC-CCCHHHHHHHHHHHHHHHHH
Q 046230 401 MPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISA-SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 401 ~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~-~~t~edid~~l~~l~~~~~~ 466 (489)
-.+..+...+..++.++++.+ ++.+.-.- .|..+.++||.+-. ..+-+.|+..++.|..++.+
T Consensus 318 ttv~vp~gvDw~dVv~~~~~~~~vei~ggl---g~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 318 TTVKVPYGVDWKDVVAYAMSHYVVEIGGGL---GPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eeeecCCCCCHHHHHHHHHHhcCEEecccc---CCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 345566677888999999999 55554222 24456789998653 45779999999999888764
No 349
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.71 E-value=1.1e-14 Score=135.88 Aligned_cols=328 Identities=15% Similarity=0.137 Sum_probs=214.0
Q ss_pred cceeEecccccccCCCCCCccchHH-HHHHHHHhCCCCCCccc--CCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPR-VIESLKKYSPSTCSSRV--DGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a-~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~ 174 (489)
|--|||- |. ||.-. +.+.+. .+...++++...-.+.+ ...-.++.+.+-.+||-++|. +..++++.++..|
T Consensus 31 ~viyLdg--nS-LGa~p--~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~n 105 (407)
T COG3844 31 GVIYLDG--NS-LGARP--RAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSIN 105 (407)
T ss_pred CeEEeec--cc-cccCc--hHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchH
Confidence 4456553 22 55442 233333 33344556544332322 333456668889999999996 5677777778777
Q ss_pred -HHhHhhhc--CCCC-EEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 175 -SAILPVLM--RKGS-LIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 175 -~~~~~al~--~~g~-~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
...+.+.. .+|+ +|+++..++++=.. .+.+.+......-...+.++++.+.+ ..++|+.
T Consensus 106 l~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~d-------------d~AvV~L 172 (407)
T COG3844 106 LFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITD-------------DVAVVLL 172 (407)
T ss_pred HHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhcc-------------ceEEEEe
Confidence 44444433 2244 55666666654221 22333322222223367788887765 7889999
Q ss_pred cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc--eEEEeC
Q 046230 247 EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG--GYIAGS 323 (489)
Q Consensus 247 e~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G--G~i~~~ 323 (489)
.+|...+|...++.+|-++++++|++++.|=+|+.|.+ ...+...++|+-++|-.|-+ |++| +++...
T Consensus 173 ~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav---------p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~ 243 (407)
T COG3844 173 SHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV---------PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVA 243 (407)
T ss_pred ccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc---------ceeecccCCCeeeeeeceeccCCCCCceeEEec
Confidence 99999999999999999999999999999999998876 23333456699999999999 4556 666554
Q ss_pred HHHHHHHHhhCCC--------------------cccc-cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHH
Q 046230 324 KELIQYLKYTCPA--------------------HLYA-TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 324 ~~~~~~l~~~~~~--------------------~~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
++..+...+...+ ..|- ++.+-..+++...+|++... -...+++++-..+.++|.
T Consensus 244 ~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~----~~i~~lR~kSlaLTd~fi 319 (407)
T COG3844 244 PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFAD----VDITELRKKSLALTDYFI 319 (407)
T ss_pred cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhh----cCHHHHHHhhhHHHHHHH
Confidence 4433322111000 0111 12334456677778998732 246788888888999999
Q ss_pred HHHHhC----CCeeeCCC----CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeec-CCCCHHHH
Q 046230 383 SELQKM----GFEVLGDN----DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICIS-ASHTKEDL 453 (489)
Q Consensus 383 ~~L~~~----g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~-~~~t~edi 453 (489)
+.++.. ++.+..+. ++..+.+..+ ...++.++|.++||+.- + ...+.+||.|+ +..+.+|+
T Consensus 320 eLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD-~------R~P~vlRfgftPlY~~~~DV 389 (407)
T COG3844 320 ELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGD-F------REPDVLRFGFTPLYVSFVDV 389 (407)
T ss_pred HHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCcccc-c------cCCCeeeecCccceechhHH
Confidence 999876 56665442 2333344332 56789999999999876 2 23477999976 67899999
Q ss_pred HHHHHHHHHHHHHh
Q 046230 454 IKALEVISRVGDLV 467 (489)
Q Consensus 454 d~~l~~l~~~~~~~ 467 (489)
-.+++.|.++++..
T Consensus 390 w~AV~~L~evL~t~ 403 (407)
T COG3844 390 WDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 350
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.70 E-value=5.9e-15 Score=156.00 Aligned_cols=295 Identities=16% Similarity=0.119 Sum_probs=200.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 215 (489)
.....+.++..|+.+|.++..++++||++ |.+++.+++.+||.|++++.+|-|+..++.++|+.++++...
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g 273 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 45568899999999999999999999766 588889999999999999999999999999999999887432
Q ss_pred --C-----HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccc-cCC
Q 046230 216 --T-----PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV-GKT 287 (489)
Q Consensus 216 --d-----~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~-g~~ 287 (489)
+ .+.+++.|++.. ... +...+|++.+.| .|.+.++++|.++|+.++ |++||||. +. ...
T Consensus 274 ~I~~~~~~~e~i~~~i~~~p-----~ak--~p~~~vit~pTY--dG~~yd~~~I~~~~~~~~--ilvDEAwg--ah~~F~ 340 (714)
T PRK15400 274 GIPQSEFQHATIAKRVKETP-----NAT--WPVHAVITNSTY--DGLLYNTDFIKKTLDVKS--IHFDSAWV--PYTNFS 340 (714)
T ss_pred CCCccccCHHHHHHHHHhCc-----ccc--CccEEEEECCCC--ccEecCHHHHHHHhCCCC--EEEEccch--hhhccC
Confidence 2 678888877642 111 123688888866 589999999999999887 68999997 32 211
Q ss_pred C----CccccccCCCCCCccEEEcccccccCCcc--eEEEeCHHH-HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc
Q 046230 288 G----RGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKEL-IQYLKYTCPAHLYATSISPPAAEQIISAIKVILG 360 (489)
Q Consensus 288 G----~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~-~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~ 360 (489)
. +.+.. .+-++++..+++-|.+|.+++.. +++-.+..+ .+.+...-. ..-+||.+-+.+|..-.+...+.+
T Consensus 341 p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~-m~~STSPsY~l~ASLD~a~~~m~~ 418 (714)
T PRK15400 341 PIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYM-MHTTTSPHYGIVASTETAAAMMKG 418 (714)
T ss_pred cccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHHh
Confidence 1 11111 22222222388899999997543 333111111 012221111 112345666677766666666632
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhC-C------CeeeCCCC----------------------------CCeE-EEE
Q 046230 361 EDGSSRGAQKLARIRENSNFFRSELQKM-G------FEVLGDND----------------------------SPVM-PIM 404 (489)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~v~~~~~----------------------------~~~~-~~~ 404 (489)
..++++.++..+.+..||+.|.++ + +.+..+.. -|+. .+.
T Consensus 419 ----~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~ 494 (714)
T PRK15400 419 ----NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLL 494 (714)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEE
Confidence 146778889999999999999887 3 44432110 1111 111
Q ss_pred e-C---------CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 405 L-Y---------NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 405 ~-~---------~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
. . .......+.+.|.++||.+.- .+.+.+-|.++...|++++++++++|.++-+
T Consensus 495 tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~-------~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 495 TPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEK-------TGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred eCCCCCCccccccCCCHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1 1 122355788899899999882 3446788889999999999999999988744
No 351
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.69 E-value=1.2e-14 Score=153.77 Aligned_cols=302 Identities=15% Similarity=0.125 Sum_probs=197.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHH-HHhcCCeEEEecCC-------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNG-ARGSGATIRVFQHN------- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~-~~~~g~~~~~~~~~------- 215 (489)
.....+.++..|+.+|.++..++++||++ |.+++.+.+.+||.|++++.+|-|+..+ +.++|+.++++...
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence 45568889999999999999999999877 5889999999999999999999999986 89999999886432
Q ss_pred ---C-----HHHHHHHHHHHH-hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHH-HHHcCcEEEEEcccccccc-
Q 046230 216 ---T-----PSHLEEVLREQI-AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAI-CKKYKAYIYLDEAHSIGAV- 284 (489)
Q Consensus 216 ---d-----~~~Le~~l~~~~-~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l-~~~~~~~li~DEa~s~g~~- 284 (489)
+ .+.++++|+++. ... ..++..+++|++.+.| .|.+.++++|.++ |++++ +|++||||. +.
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~---~~~~p~k~vvit~pTY--dG~~ydi~~I~~~~~h~~~-~llvDEAhg--ah~ 324 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERA---DEARPFRLAVIQLGTY--DGTIYNARQVVDKIGHLCD-YILFDSAWV--GYE 324 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCcccc---ccccCceEEEEECCCC--cceeecHHHHHHHhhccCC-cEEEeCcch--hhh
Confidence 3 345777776541 100 0011247788888877 5889999999999 78888 999999997 32
Q ss_pred cCCCC--ccc-cccCCCC-CCccEEEcccccccCCcc--eEEEeCHHHH---------HHHHhhCCCcccccCCCHHHHH
Q 046230 285 GKTGR--GVC-ELLEVDT-ADVDIMMGTFTKSFGSCG--GYIAGSKELI---------QYLKYTCPAHLYATSISPPAAE 349 (489)
Q Consensus 285 g~~G~--~~~-~~~~v~p-~~~Di~~~t~sK~~g~~G--G~i~~~~~~~---------~~l~~~~~~~~~~~~~~p~~~a 349 (489)
+.... ... ......+ +..++++-|.+|.+++.. +++-.+...+ +.+...-. ..-+||.+-+.+|
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~-m~qSTSPsY~LmA 403 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM-LHASTSPFYPLFA 403 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH-HHcCCChHHHHHH
Confidence 22211 111 0111222 111288899999997543 5654432221 22322111 1123445555555
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH-HhC-CCeeeCCC----------------------------C--
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL-QKM-GFEVLGDN----------------------------D-- 397 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~-g~~v~~~~----------------------------~-- 397 (489)
..-.+-..+.+. .++++.++..+.+..+|+.| +.. ++.+..+. .
T Consensus 404 SLDva~~~m~~~----~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~wh 479 (720)
T PRK13578 404 ALDVNAKMHEGE----SGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWH 479 (720)
T ss_pred HHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCcccc
Confidence 555544555321 45778888888889999988 444 45443110 0
Q ss_pred ------------CCeEEEEeCCCCc------------HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHH
Q 046230 398 ------------SPVMPIMLYNPAK------------IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDL 453 (489)
Q Consensus 398 ------------~~~~~~~~~~~~~------------~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edi 453 (489)
-|+.-........ ...+.+.|.++||.+.- .+.+.+-+.++...|++++
T Consensus 480 gf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~-------~d~~~vL~l~s~g~t~~~~ 552 (720)
T PRK13578 480 GFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEK-------CDLNSILFLLTPAEDMAKL 552 (720)
T ss_pred ccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHH
Confidence 0111111111112 46788999888998872 3346688888889999999
Q ss_pred HHHHHHHHHHHHH
Q 046230 454 IKALEVISRVGDL 466 (489)
Q Consensus 454 d~~l~~l~~~~~~ 466 (489)
++++++|.++-+.
T Consensus 553 ~~Lv~aL~~f~~~ 565 (720)
T PRK13578 553 QQLVAMLARFEKH 565 (720)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987543
No 352
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.1e-14 Score=138.44 Aligned_cols=284 Identities=17% Similarity=0.214 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~Le 221 (489)
+-...||+++|.+-|.-.++.+.||..|...++..++++||.|++...-|+.+... ++..|.+++.++.+|++.++
T Consensus 62 PT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 62 PTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred chHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 33478999999998888889999999999999999999999999888888775543 35569999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.+++ ++.+|.+|.+-++.+.+.++++|.++|+++|++||+|...+...+ +..+. ..
T Consensus 142 ~aI~~-------------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-------~rP~~---hG 198 (426)
T COG2873 142 AAIDE-------------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-------CRPIE---HG 198 (426)
T ss_pred HHhCc-------------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-------cchhh---cC
Confidence 99986 556788999999999999999999999999999999999874332 22232 23
Q ss_pred ccEEEcccccccCCcc----eEEEeCHHHHHHHHhhC-----------CCc---------------------ccccCCCH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTC-----------PAH---------------------LYATSISP 345 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~-----------~~~---------------------~~~~~~~p 345 (489)
.||++.|.+|.+|+.| |.|+-.-. .|+-.... ++. ..+.+++|
T Consensus 199 ADIVvHS~TK~igGhGt~iGG~iVD~G~-FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsP 277 (426)
T COG2873 199 ADIVVHSATKYIGGHGTAIGGVIVDGGK-FDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSP 277 (426)
T ss_pred CCEEEEeecccccCCccccceEEEeCCc-cccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCc
Confidence 4999999999999877 55542211 11110000 001 12345677
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC---------CCe----------eeCCCCCCeEEEEeC
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM---------GFE----------VLGDNDSPVMPIMLY 406 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~----------v~~~~~~~~~~~~~~ 406 (489)
..+-..+..||.+ .-++++..+|...+.+-|++. |++ ..+...+.++.+.+.
T Consensus 278 fnAfl~lqGlETL---------~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~k 348 (426)
T COG2873 278 FNAFLLLQGLETL---------SLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVK 348 (426)
T ss_pred HHHHHHHhchhhh---------HHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEec
Confidence 6666666666644 457778888888888888775 111 111222445666555
Q ss_pred CC-CcHHHHHHHHh------h----CCceEEeecCCC----------cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NP-AKIPAFSRECL------R----QNVAVVTVAFPA----------TPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~-~~~~~~~~~l~------~----~Gi~v~~~~~p~----------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.. +...+|.+.|. + +-+.+.|..--. ....++.||+++. -||++.++.-|+++++
T Consensus 349 gg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVG----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 349 GGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVG----IEDIDDIIADLEQALE 424 (426)
T ss_pred ChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHh
Confidence 54 22334444333 1 123333211000 0234578999985 4778888888888765
Q ss_pred H
Q 046230 466 L 466 (489)
Q Consensus 466 ~ 466 (489)
.
T Consensus 425 ~ 425 (426)
T COG2873 425 A 425 (426)
T ss_pred c
Confidence 3
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.68 E-value=2.8e-14 Score=150.82 Aligned_cols=295 Identities=18% Similarity=0.151 Sum_probs=198.5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------- 215 (489)
.....+.++..|+.+|.++..++++||++ |.+++.+.+.+||.|++++.+|-|+..++.++|+.++++...
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 45567889999999999999999999766 588999999999999999999999999999999999887432
Q ss_pred --CH-----HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEE-EEEcccccccc-cC
Q 046230 216 --TP-----SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYI-YLDEAHSIGAV-GK 286 (489)
Q Consensus 216 --d~-----~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~l-i~DEa~s~g~~-g~ 286 (489)
+. +.+++.|+++. ... +.+++|++.+.| .|.+.++++|.++| |+.+ ++||||. +. ..
T Consensus 274 ~I~~~~~~~e~I~~~i~~~p-----~~~--~p~~vvit~pTY--dGi~yd~~~I~~~~---g~~~ilvDEAhg--ah~~F 339 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAATT-----QAQ--WPVHAVITNSTY--DGLLYNTDWIKQTL---DVPSIHFDSAWV--PYTHF 339 (713)
T ss_pred CCChhhccHHHHHHHHHhCC-----CcC--CceEEEEECCCC--CceeeCHHHHHHHh---CCCEEEEeccch--hhhhc
Confidence 23 77888877642 111 225788888866 58999999999999 6655 6999998 32 21
Q ss_pred CC--CccccccCC-CCCCccEEEcccccccCCcc--eEEEeCHHHH-HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc
Q 046230 287 TG--RGVCELLEV-DTADVDIMMGTFTKSFGSCG--GYIAGSKELI-QYLKYTCPAHLYATSISPPAAEQIISAIKVILG 360 (489)
Q Consensus 287 ~G--~~~~~~~~v-~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~-~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~ 360 (489)
.. .......+. .++.+.+++-|.+|.+++.. +++-.+..+- +.+...-. ..-+||.+-+.+|..-.+...+.+
T Consensus 340 ~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~-m~~STSPsY~LmASLD~a~~~m~~ 418 (713)
T PRK15399 340 HPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM-MHTSTSPSYPIVASVETAAAMLRG 418 (713)
T ss_pred CcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHHh
Confidence 11 111111111 12222333899999997544 6664432211 12222111 112345666677766666666632
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhC-C------CeeeCCC--------------C--------------CCeE-EEE
Q 046230 361 EDGSSRGAQKLARIRENSNFFRSELQKM-G------FEVLGDN--------------D--------------SPVM-PIM 404 (489)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~v~~~~--------------~--------------~~~~-~~~ 404 (489)
..++++.++..+.+..||+.|.++ + +.+..+. . -|+. .+.
T Consensus 419 ----~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~ 494 (713)
T PRK15399 419 ----NPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTIL 494 (713)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEE
Confidence 146778888999999999999876 3 3333210 0 1111 111
Q ss_pred eC----------CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 405 LY----------NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 405 ~~----------~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.. .......+.+.|.++||.+.- .+.+.+-+.++...|++++++++++|.++-+
T Consensus 495 t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~-------~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 495 TPGMDEQGNMSEEGIPAALVAKFLDERGIVVEK-------TGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred ecCcccccccccCCCCHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 11 123455788999999999882 3346788888889999999999999987744
No 354
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.3e-14 Score=141.95 Aligned_cols=284 Identities=15% Similarity=0.148 Sum_probs=197.1
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHLE 221 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~Le 221 (489)
+....+++.++++-|.+.+++|+||..|...++..+..+|+.|+.....|+.+..-+ ...|.....+..+|+++++
T Consensus 77 Pt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~ 156 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKIL 156 (409)
T ss_pred CchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHH
Confidence 344789999999999999999999999998899999999998888878887765543 3457777777777777777
Q ss_pred HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 222 EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 222 ~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
+.+.+ ++.+|.+|.+.||...+.++++|.++|+++|+++++|+..+-+.+ ++.+ +-+
T Consensus 157 ~~i~~-------------~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-------~~pL---~lG 213 (409)
T KOG0053|consen 157 KAIKE-------------NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-------QDPL---PLG 213 (409)
T ss_pred Hhhcc-------------CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-------cChh---hcC
Confidence 77654 566888999999999999999999999999999999999772211 1222 233
Q ss_pred ccEEEcccccccCCcc----eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSFGSCG----GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 302 ~Di~~~t~sK~~g~~G----G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
.||++.|.+|.||+.. |.++.+ +++...+...... .+...+|..|......|+.+ .-++++..+
T Consensus 214 ADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~--lg~~~~p~~~~ll~Rglktl---------~lRi~~~~e 282 (409)
T KOG0053|consen 214 ADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQED--LGWCEDPFDLFLLSRGLKTL---------HLRINKHSE 282 (409)
T ss_pred CCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHH--hcCCCCHHHHHHHhcCcchh---------hhhHHHHHH
Confidence 4999999999998754 888885 8888877765533 33458999988888777644 446666666
Q ss_pred HHHHHHHHHHhC---------CCeeeCC----------CCCCeEEEEeCCCCcHHHHHHHHhhC--CceEEe----ecCC
Q 046230 377 NSNFFRSELQKM---------GFEVLGD----------NDSPVMPIMLYNPAKIPAFSRECLRQ--NVAVVT----VAFP 431 (489)
Q Consensus 377 ~~~~l~~~L~~~---------g~~v~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~v~~----~~~p 431 (489)
++..+.+.|++. |++-.+. ..+.++...........+|...|.=- +..+.. ...|
T Consensus 283 na~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p 362 (409)
T KOG0053|consen 283 NALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPP 362 (409)
T ss_pred HHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhhhcccCcCccchhhcch
Confidence 666666666654 2211110 11223444444555555565544321 111110 1111
Q ss_pred Cc-------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 432 AT-------------PLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 432 ~~-------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+. ...++.+|+++. -|+++.++..|.++++.+
T Consensus 363 ~~mth~~~~e~~~~~Gi~~~LVRvSVG----iEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 363 AIMTHASELEEREKFGIDPNLVRVSVG----IEDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhhccCCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHHhh
Confidence 11 133578999995 477888888888887764
No 355
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=2.8e-15 Score=133.68 Aligned_cols=161 Identities=25% Similarity=0.315 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHh--CCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH-HHHHhcCCeEEEecCCCHH----HH
Q 046230 148 HNELEECVARFV--GKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV-NGARGSGATIRVFQHNTPS----HL 220 (489)
Q Consensus 148 ~~~l~~~la~~~--g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~-~~~~~~g~~~~~~~~~d~~----~L 220 (489)
+.++++.+++++ +.+..+++++|++++..++.++.++++.|++..+.|++.. ..+...|++++.++.++.. ++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 368999999999 7788888899999999999999888899999999988877 7788889999888765221 11
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+. +.+... ..+..++++.+.++++|...++++|.++|+++|+++|+|++|+.+.....+ .+....
T Consensus 82 ~~-~~~~~~--------~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~ 146 (170)
T cd01494 82 AI-LEELKA--------KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG------VLIPEG 146 (170)
T ss_pred hh-hhhccc--------cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc------cccccc
Confidence 11 111110 135677888888899999999999999999999999999999944332211 111123
Q ss_pred CccEEEcccccccCCcc-eEEEeC
Q 046230 301 DVDIMMGTFTKSFGSCG-GYIAGS 323 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G-G~i~~~ 323 (489)
++|+++.|++|.|+++| |+++.+
T Consensus 147 ~~d~~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 147 GADVVTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred cCCEEEEEcccccCCCceEEEEeC
Confidence 45999999999998777 888753
No 356
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.63 E-value=1.6e-13 Score=140.46 Aligned_cols=267 Identities=18% Similarity=0.189 Sum_probs=177.0
Q ss_pred CcchhHHHHHHHHHHHhCCC---CEEEeCccHHHHHHhHhhhcC-----C---------CCEEEEcCCCchHHHHHHHhc
Q 046230 143 GTLMVHNELEECVARFVGKP---AAIVFGMGYVTNSAILPVLMR-----K---------GSLIISDSLNHNSIVNGARGS 205 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~~~al~~-----~---------g~~Vl~~~~~h~~~~~~~~~~ 205 (489)
++..+.+++-..++++++.+ ...+.+.||++|..++.+... . ...|+++...|.|+..++++.
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l 177 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL 177 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh
Confidence 44444555555566666663 456778889999555444321 1 126999999999999999999
Q ss_pred CCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc
Q 046230 206 GATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 206 g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~ 279 (489)
|...+.++.. |+++|++++.+.... . +|+.-...+++|.+.|+++|.++|++|++++++|.|+
T Consensus 178 G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~---------g--~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~ 246 (460)
T COG0076 178 GLGLRRVPTVPTDYRIDVDALEEAIDENTIG---------G--VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF 246 (460)
T ss_pred CCCceeEEeccCccccCHHHHHHHHHhhccC---------c--eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc
Confidence 8776655432 899999999885321 1 2433334456899999999999999999999999999
Q ss_pred ccccccC-CCCcccc-ccCCCCCCccEEEcccccccC-Ccc-eEEEeC-H-HHHHHHHhhCCCc------ccc--cCCCH
Q 046230 280 SIGAVGK-TGRGVCE-LLEVDTADVDIMMGTFTKSFG-SCG-GYIAGS-K-ELIQYLKYTCPAH------LYA--TSISP 345 (489)
Q Consensus 280 s~g~~g~-~G~~~~~-~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~-~-~~~~~l~~~~~~~------~~~--~~~~p 345 (489)
+ ++-. .-+.-.. .+++ ..+|-+..+++|.+. +.| |+++.+ + .+.+.+....... .++ .+-+.
T Consensus 247 G--G~~~pf~~~~~~~~f~l--~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~ 322 (460)
T COG0076 247 G--GFLLPFLEPDGRWDFGL--EGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPG 322 (460)
T ss_pred c--ceeecccCccchhhcCC--CCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccch
Confidence 8 4321 1111111 2444 456888889999984 445 666554 4 3554443211110 011 12222
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCeEEEEeCCCCc-HHHHHHHHhhCCc
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAK-IPAFSRECLRQNV 423 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Gi 423 (489)
...++..+.|..+ +.+...++.++..++.+++.+.|++.| +++..++..+++.+.+....+ ..+...++.+.|.
T Consensus 323 ~~~~~~~~~l~~l----G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw 398 (460)
T COG0076 323 RQALALYANLRRL----GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDRRGW 398 (460)
T ss_pred HHHHHHHHHHHHh----CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHhcCc
Confidence 2566667777766 445678888888999999999999996 999888888888888744333 4455666666777
Q ss_pred eEEee
Q 046230 424 AVVTV 428 (489)
Q Consensus 424 ~v~~~ 428 (489)
.+...
T Consensus 399 ~v~~~ 403 (460)
T COG0076 399 QVPAQ 403 (460)
T ss_pred eeecc
Confidence 77653
No 357
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.63 E-value=6.6e-16 Score=149.20 Aligned_cols=253 Identities=20% Similarity=0.207 Sum_probs=166.8
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCch
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHN 196 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~ 196 (489)
+|++.+++.++.. +.. .||..+...++++++++++|.|.++++.+|+.+|..++++++.++..|++....|.
T Consensus 8 ~~~m~~a~~~a~~--gd~------~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi 79 (290)
T PF01212_consen 8 TPAMLEAMAAANV--GDD------AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHI 79 (290)
T ss_dssp -HHEEHHHHHTTS--B-C------CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHH
T ss_pred CHHHHHHHHcccc--CCc------ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceecccccee
Confidence 5788888844432 211 24678888999999999999999999999999999999999999999999999887
Q ss_pred HHHH--H-HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC-CCCCCC---hHHHHH
Q 046230 197 SIVN--G-ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM-EGELCK---FPEIIA 264 (489)
Q Consensus 197 ~~~~--~-~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~-~G~~~~---l~~i~~ 264 (489)
.... + ..++|.+++.++.. ++++|++.+..... |.+ ...+|.++...+. .|.+.+ +++|.+
T Consensus 80 ~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~------h~~-~~~~v~le~t~~~~GG~~~s~~el~ai~~ 152 (290)
T PF01212_consen 80 HFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA------HHP-QPAVVSLENTTELAGGTVYSLEELRAISE 152 (290)
T ss_dssp HHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG------TSG-GEEEEEEESSBTTTTSB---HHHHHHHHH
T ss_pred eeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc------cCC-CccEEEEEecCcCCCCeeCCHHHHHHHHH
Confidence 6432 2 25689998888654 68999999987422 222 4456666655543 476654 789999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCCc--cccc
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPAH--LYAT 341 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~~--~~~~ 341 (489)
+|++||+.|++|.+.-.-.....|....++. ..+|++..+++|.+|.++ +.+++++++++......... ....
T Consensus 153 ~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg~~~~ 228 (290)
T PF01212_consen 153 LAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGGGMRQ 228 (290)
T ss_dssp HHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhccCeee
Confidence 9999999999999964222211122233333 345899889999998755 88899999766543322111 0000
Q ss_pred CCCHHHHH---HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 342 SISPPAAE---QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 342 ~~~p~~~a---a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
.+ +.++ -...++..+. ....+..+..++.+.+.+.|+.+++.+..+.
T Consensus 229 ~G--~~~a~~~~~~~~l~~l~------~~~~~~~~~~~~A~~La~~l~~~~~~~~~~~ 278 (290)
T PF01212_consen 229 AG--VLAAAELYQFAALRALE------LWLERARHANAMAKRLAAGLEALGGVLPRPV 278 (290)
T ss_dssp TT--HHHHHHHHHHHHHCHEE------CSHHHHHCHHHHHHCHHHCHHEECEEEETTS
T ss_pred cc--eeeeechhhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence 11 1222 0112222221 2356778888899999999999887765443
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.62 E-value=3e-13 Score=149.16 Aligned_cols=280 Identities=16% Similarity=0.177 Sum_probs=189.8
Q ss_pred cCCCcchhHHHHHHHHHHHhCCCC--EEEeCccHHHHHHhHhhhc-CC--CCEEEEcCCCchHHHHHH----HhcCCeEE
Q 046230 140 VDGGTLMVHNELEECVARFVGKPA--AIVFGMGYVTNSAILPVLM-RK--GSLIISDSLNHNSIVNGA----RGSGATIR 210 (489)
Q Consensus 140 ~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~~~~al~-~~--g~~Vl~~~~~h~~~~~~~----~~~g~~~~ 210 (489)
...|..+...+++..+++++|.+. +-+..++|++..+++.++. .+ ++.|+++...|+++...+ +..|.+++
T Consensus 115 isQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 115 ISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 345777778889999999999873 3445566666565555543 33 489999999999987654 45688988
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc-cccccCCCC
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHS-IGAVGKTGR 289 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s-~g~~g~~G~ 289 (489)
.++.++ +++ . .+.+.+++. ..+.+|.+.|+++|+++|+++|+++++|-.+. .+.+-+.|
T Consensus 195 ~~~~~~--d~~----~------------~~~~~vlvq-~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pg- 254 (954)
T PRK05367 195 VGDAAK--ALD----H------------DDVFGVLLQ-YPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPG- 254 (954)
T ss_pred EecCcc--CCC----c------------ccEEEEEEe-cCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChh-
Confidence 887653 111 1 244555443 34668999999999999999999999998774 22221111
Q ss_pred ccccccCCCCCCccEEEcccccc-----cCCcc-eEEEeCHHHHHHHHhhCC----------Cccc-----------ccC
Q 046230 290 GVCELLEVDTADVDIMMGTFTKS-----FGSCG-GYIAGSKELIQYLKYTCP----------AHLY-----------ATS 342 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~-----~g~~G-G~i~~~~~~~~~l~~~~~----------~~~~-----------~~~ 342 (489)
- -++||++++..|+ +|++| |+++.++++.+.+...-- .+.+ -..
T Consensus 255 ----e-----~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRreka 325 (954)
T PRK05367 255 ----E-----MGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKA 325 (954)
T ss_pred ----h-----cCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccc
Confidence 1 2349999999998 77777 999999988776632110 0110 001
Q ss_pred C-CH---HHHHHHHHHH--HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 343 I-SP---PAAEQIISAI--KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 343 ~-~p---~~~aa~~a~L--~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
. |. .+..++++++ .++ ++...++..+++..+.++++++|++.|+++........+.+.+ +....++.+
T Consensus 326 TsNict~qaL~a~~a~~y~~~~----g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~--~~~~~~i~~ 399 (954)
T PRK05367 326 TSNICTAQVLLAVMASMYAVYH----GPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEV--GGDAAAVLA 399 (954)
T ss_pred ccccchHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeC--CCCHHHHHH
Confidence 1 11 1122222222 222 2334567788899999999999988888875443223333333 346788999
Q ss_pred HHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 417 ECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 417 ~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
+|.++||.+.. ...+.+|+++....|++|||+++++|.
T Consensus 400 ~l~~~gi~~~~-------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 400 RALAAGINLRR-------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHCCceecc-------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 99999999852 124679999999999999999999997
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.61 E-value=3.5e-13 Score=148.05 Aligned_cols=323 Identities=14% Similarity=0.143 Sum_probs=200.7
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHhCCCCC-CcccCCCcchhHHHHHHHHHHHhCCC-CEE-EeCccHHHHHHhH
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTC-SSRVDGGTLMVHNELEECVARFVGKP-AAI-VFGMGYVTNSAIL 178 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~-~~i-~~~sG~~a~~~~~ 178 (489)
+.||.+.++..+- .|+.|.+++.+...-|..... ..-...|..+...+++..+|+++|.+ +.+ ++.++|++..+++
T Consensus 104 ~~~fiG~G~y~~~-~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~ 182 (993)
T PLN02414 104 FKSYIGMGYYNTH-VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMA 182 (993)
T ss_pred cccccCCCCCCcc-CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHH
Confidence 4444433333331 234444777665543221111 11122466777788999999999986 344 4455555555555
Q ss_pred hhhc-C--CCCEEEEcCCCchHHHHHHH----hcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 179 PVLM-R--KGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 179 ~al~-~--~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
.+.. . +++.|+++...|+++...++ ..|.+++.++..+.+ .. . ...+.+++ ...+
T Consensus 183 ~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----~~-~------------~~v~~vlv-q~P~ 244 (993)
T PLN02414 183 MCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----YS-S------------GDVCGVLV-QYPA 244 (993)
T ss_pred HHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----cc-c------------CceEEEEE-ecCC
Confidence 4542 3 45789999999999876653 358888888754321 00 0 23344443 3445
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-----Ccc-eEEEeCHH
Q 046230 252 MEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-----SCG-GYIAGSKE 325 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-----~~G-G~i~~~~~ 325 (489)
.+|.+.|+++|.++|+++|+++++ .++.++..+-. .+..-++||++++..|+.+ ++. |+++.+++
T Consensus 245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~--------~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~ 315 (993)
T PLN02414 245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK--------PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE 315 (993)
T ss_pred CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC--------CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH
Confidence 589999999999999999999999 77765432211 0111245999999999983 333 99999988
Q ss_pred HHHHHHhh--C--------CCcc-----------c-ccCCCHHHHHHHHHHHHHH-HccCCCchHHHHHHHHHHHHHHHH
Q 046230 326 LIQYLKYT--C--------PAHL-----------Y-ATSISPPAAEQIISAIKVI-LGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 326 ~~~~l~~~--~--------~~~~-----------~-~~~~~p~~~aa~~a~L~~i-~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
+...+... . ..+. + -.+.|....++..+++..+ ....++...++..+++.+++.+++
T Consensus 316 ~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~ 395 (993)
T PLN02414 316 YKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFA 395 (993)
T ss_pred HHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 76644210 0 0100 0 0123332333333333211 111133345677788999999999
Q ss_pred HHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 383 SELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 383 ~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
++|++.|+++..+.....+.+.+. ...++.++|.++||.+.... .+.+|+|++..+|++|||+++++|..
T Consensus 396 ~~L~~~G~~~~~~~~f~~vt~~~~---~~~~v~~~L~~~gI~l~~~~-------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 396 AGLKKLGFQVQSLPFFDTVKVKCS---DADAIADAAAKVGINLRVVD-------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHhhcCCccCCCCCcCeEEEecC---CHHHHHHHHHHCCCeeEEec-------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 999998988765433334444432 45789999999999887422 35699999999999999999999963
No 360
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.60 E-value=7.8e-13 Score=132.26 Aligned_cols=284 Identities=15% Similarity=0.073 Sum_probs=188.5
Q ss_pred cchhHHHHHHHHHHHhCCC--C-EEE-eCccHHHHHHhHhhhc-CCCCEEEEcCCCchHH-H-HHHHhcCC-eEEEec--
Q 046230 144 TLMVHNELEECVARFVGKP--A-AIV-FGMGYVTNSAILPVLM-RKGSLIISDSLNHNSI-V-NGARGSGA-TIRVFQ-- 213 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--~-~i~-~~sG~~a~~~~~~al~-~~g~~Vl~~~~~h~~~-~-~~~~~~g~-~~~~~~-- 213 (489)
..++..+..+.|.++++.+ . +++ .+||+.+..+++..+. .+|+.+++.. .|+.. . ..++..|. ++..+.
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCC
Confidence 3577788899999999863 2 344 3788888888888877 4787777654 55554 3 45666777 355543
Q ss_pred CC---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 214 HN---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 214 ~~---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
.. |+++++. + +. +.++. .-+.+|...|+++++..+ +++++|+|.+-++|+.
T Consensus 116 ~g~~~~~~~ve~---~-------------~~-v~~vh-nETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~------ 169 (374)
T TIGR01365 116 YGKLPDLKKVDF---K-------------ND-VVFTW-NGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ------ 169 (374)
T ss_pred CCCCCCHHHcCC---C-------------CC-EEEec-CCCchheecccccccccc--CCCcEEEEccchhcCC------
Confidence 32 5555551 1 11 33332 334478888987666332 5899999999997743
Q ss_pred cccccCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhCC-----C--------------cccccC--CCHHH
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCP-----A--------------HLYATS--ISPPA 347 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~~-----~--------------~~~~~~--~~p~~ 347 (489)
.+.+ +++|+++.+--|+|++++ ++++.+++.++....... . ....+. .+-..
T Consensus 170 ---~l~~--d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~ 244 (374)
T TIGR01365 170 ---DLDY--HKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLC 244 (374)
T ss_pred ---CCCh--hHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHH
Confidence 3333 357999999999997665 788888887776553111 0 001111 22234
Q ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC---CCCCeE-EEEeCCC-C-----c-----H
Q 046230 348 AEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVLGD---NDSPVM-PIMLYNP-A-----K-----I 411 (489)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~~---~~~~~~-~~~~~~~-~-----~-----~ 411 (489)
..++..+|+.++.+ +..+++.++.+++++.+++.++++| +.+... .+++.+ .+.+..+ . + .
T Consensus 245 l~a~~~~l~~i~~e---gGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~ 321 (374)
T TIGR01365 245 VEDWLDALKWAESI---GGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFA 321 (374)
T ss_pred HHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHH
Confidence 44556666655421 2478999999999999999999998 666542 345533 3444333 1 2 5
Q ss_pred HHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 412 PAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.+|.+.|.++||.+.+...+ .....+||.--..++.+|++.+++.|+=+.+
T Consensus 322 ~~~~~~l~~~gi~i~~G~~~---~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 322 KELISTLEKEGVAYDIGSYR---DAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred HHHHHHHHHCCEEEeccccc---cCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 78999999999988854332 2247899998788999999999999986554
No 361
>PLN02452 phosphoserine transaminase
Probab=99.60 E-value=9.4e-13 Score=131.64 Aligned_cols=324 Identities=15% Similarity=0.141 Sum_probs=208.6
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCC-----CCcccCCCcchhHHHHHHHHHHHhCCC---CEEEe-Ccc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPST-----CSSRVDGGTLMVHNELEECVARFVGKP---AAIVF-GMG 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~-----~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG 170 (489)
++.+||+ -|-..-+++|.+++.+.+.+|.... .+.|. .-..++..+.++.|.++++.+ +++++ ++|
T Consensus 6 ~~~~~f~----pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs-~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg 80 (365)
T PLN02452 6 GRVFNFS----AGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRG-KEFLSIIQKAEADLRELLDIPDNYEVLFLQGGA 80 (365)
T ss_pred CceEeee----CCCCCCCHHHHHHHHHHHhcccccCccccccCCCc-hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence 3467776 5555557889999888876653211 11121 113467788999999999875 34444 677
Q ss_pred HHHHHHhHhhhcCCCCE-EEEcCCCchHH-HHHHHhcCCeEEEe--cCCC---HHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSL-IISDSLNHNSI-VNGARGSGATIRVF--QHNT---PSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~-Vl~~~~~h~~~-~~~~~~~g~~~~~~--~~~d---~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+.+..+++..+..+++. .++....|+.- ..-++..|...+.. +..+ +-++++ ++.. + ....
T Consensus 81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~----------~-~~~~ 148 (365)
T PLN02452 81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSE-WELT----------P-DAKF 148 (365)
T ss_pred HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHH-cCCC----------C-CCcE
Confidence 77778888888777664 44556666553 33344455443333 1221 223333 2211 1 2233
Q ss_pred EEEcCcCCCCCC-CCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEE
Q 046230 244 VIVEGIYSMEGE-LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIA 321 (489)
Q Consensus 244 vive~v~s~~G~-~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~ 321 (489)
|.+-..-+.+|. +.+++++.+ +++|+|-++++|.. ..+++. .++...|..|.+|++| |+++
T Consensus 149 v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~---------pidv~~--~~v~~~saqK~lGP~Gl~~v~ 211 (365)
T PLN02452 149 VHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSK---------PVDVSK--YGVIYAGAQKNVGPSGVTIVI 211 (365)
T ss_pred EEECCCCCCCcEecCcccccCC------CeEEEECCccccCc---------ccCHHH--cCEEEEecccccCCCCeEEEE
Confidence 333333344677 477777642 89999999996642 333332 3444459999999999 9999
Q ss_pred eCHHHHHHHHhhCCCc-----------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-C
Q 046230 322 GSKELIQYLKYTCPAH-----------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-G 389 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~-----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 389 (489)
.++++++........+ .+ .+.|-....+..++|+.+.. ....+.+.++.+++++++++.|++. |
T Consensus 212 vr~~~l~~~~~~~~~~~~~~~~~~~~s~~-~TP~v~~i~~l~~aL~~l~~---~gGl~~~~~r~~~~a~~l~~~l~~~~G 287 (365)
T PLN02452 212 IRKDLIGNARPITPGMLDYKIHAENDSLY-NTPPCFGIYMCGLVFEDLLA---QGGLKAMEKRNIRKADLLYDAIDESNG 287 (365)
T ss_pred EcHHHHhhcccCCCchhhHHHHHhcCCcc-CChhHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998887654321111 11 23556677888889998853 1246889999999999999999986 6
Q ss_pred Ceee-CC--CCC-CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 390 FEVL-GD--NDS-PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 390 ~~v~-~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+... .+ .++ .++++.+.+.....+|.+.+.++|+...+ ++..+ +.+|++.--+++.++++.+++.+++.-+
T Consensus 288 ~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~-G~r~~----gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 288 FYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLK-GHRSV----GGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred cccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccC-Ccccc----CceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 6211 11 123 46777777666778999999999998873 22221 2399998889999999999999998765
Q ss_pred H
Q 046230 466 L 466 (489)
Q Consensus 466 ~ 466 (489)
+
T Consensus 363 ~ 363 (365)
T PLN02452 363 K 363 (365)
T ss_pred h
Confidence 4
No 362
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.58 E-value=5.5e-13 Score=134.06 Aligned_cols=246 Identities=21% Similarity=0.231 Sum_probs=160.6
Q ss_pred chhHHHHHHHHHHHhCCC---------CEEEeCccHHHHHHhHhhhc----------C----CCCEEEEcCCCchHHHHH
Q 046230 145 LMVHNELEECVARFVGKP---------AAIVFGMGYVTNSAILPVLM----------R----KGSLIISDSLNHNSIVNG 201 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~~~al~----------~----~g~~Vl~~~~~h~~~~~~ 201 (489)
..+..++-+.+++++|.+ ..++.++||++|..++.+.. + +.-+|++....|.++..+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 444555566666777765 35777888999954443321 1 234688888899999999
Q ss_pred HHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEE
Q 046230 202 ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 202 ~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~D 276 (489)
++..|..++.++.+ |.++|+++|++...+| ....+|+..--.+.+|.++|+++|.++|++|+++|++|
T Consensus 158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g-------~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVD 230 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIANG-------KTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVD 230 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTT-------EEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEE
T ss_pred cceeeeEEEEecCCcchhhhHHHhhhhhccccccc-------ccceeeeccCCCcccccccCHHHHhhhccccceeeeec
Confidence 99999998888766 7899999999877764 22334444444456899999999999999999999999
Q ss_pred cccccccc-cCCCCccccccCCCCCCccEEEcccccccCCcc--eEEEeCH-HHHHHHHhhCCCcc--------------
Q 046230 277 EAHSIGAV-GKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSK-ELIQYLKYTCPAHL-------------- 338 (489)
Q Consensus 277 Ea~s~g~~-g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~-~~~~~l~~~~~~~~-------------- 338 (489)
.+++-..+ -+.-+. -..++ ..+|-+.-.++|+++.+- |++..++ ............+.
T Consensus 231 aA~gg~~~~~~~~~~--~~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 231 AAYGGSALLSPEYRH--LLFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp ETTGGGGGGHCTTGG--GGTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ccccccccccccccc--ccccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 99982112 232222 12334 345888889999997553 7776654 33332111111111
Q ss_pred -cccCCC-HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEe
Q 046230 339 -YATSIS-PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIML 405 (489)
Q Consensus 339 -~~~~~~-p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~ 405 (489)
++...+ ...+..+..+|+.+ +.+...+++++..+++++|.+.|++. ++++..++..+++++.+
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~----G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSL----GREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred cccccccccchHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 111122 34556666777765 33466788888899999999999998 68888777777777654
No 363
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.56 E-value=1.6e-12 Score=129.27 Aligned_cols=305 Identities=16% Similarity=0.144 Sum_probs=191.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC-CCCEEEEcCC-------CchHH-HHHHHhcCCeEEEec--
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR-KGSLIISDSL-------NHNSI-VNGARGSGATIRVFQ-- 213 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~-~g~~Vl~~~~-------~h~~~-~~~~~~~g~~~~~~~-- 213 (489)
.+-..+|++.+++++|.+.++.+.+|..++..+++++++ +|+.+.++.. .|... ...+.++|+.++.+.
T Consensus 73 dpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ 152 (467)
T TIGR02617 73 SRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTK 152 (467)
T ss_pred CchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccch
Confidence 444579999999999999999999999999888888887 6666664432 23332 344667787765531
Q ss_pred --------C----C-CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC-CCCCCC---ChHHHHHHHHHcCcEEEEE
Q 046230 214 --------H----N-TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS-MEGELC---KFPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 214 --------~----~-d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s-~~G~~~---~l~~i~~l~~~~~~~li~D 276 (489)
+ + |++.|++.|++. | +.+...+.+.-+.| ..|... +++++.++|++||+.+++|
T Consensus 153 ea~~~~~~~~fkG~~dl~~le~~I~~~---g------~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLD 223 (467)
T TIGR02617 153 EAFDTGVRYDFKGNFDLEGLERGIEEV---G------PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMD 223 (467)
T ss_pred hhcccccCCCCCCCcCHHHHHHHHhhc---C------CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEE
Confidence 1 1 889999999863 1 12233333322223 346554 4789999999999999999
Q ss_pred cccccc-c-c------cCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEeCHH-HHHHHHh---hC----CCccc
Q 046230 277 EAHSIG-A-V------GKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKE-LIQYLKY---TC----PAHLY 339 (489)
Q Consensus 277 Ea~s~g-~-~------g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~-~~~~l~~---~~----~~~~~ 339 (489)
.+.-+- + | +..+..+.+...--....|.++-|++|.+|.+ ||+++++++ +.+.+.. .. ...+|
T Consensus 224 gARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tY 303 (467)
T TIGR02617 224 SARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTY 303 (467)
T ss_pred hHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCcCc
Confidence 986431 2 2 34444433221000123388888999999866 899999765 3333332 11 12233
Q ss_pred ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEe----C----CCCcH
Q 046230 340 ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIML----Y----NPAKI 411 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~----~----~~~~~ 411 (489)
+ +++---+.++...|+.. ..++.+..--...+||.+.|.+.|+++.. .++.-+.+.. + ..-..
T Consensus 304 G-Glagrd~ea~a~Gl~e~-------~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa 374 (467)
T TIGR02617 304 G-GLEGGAMERLAVGLYDG-------MNLDWLAYRINQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPA 374 (467)
T ss_pred C-chhHHHHHHHHhhhhhc-------ccHHHHHHHHHHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcH
Confidence 3 23333344433344433 33455555556678999999999999987 7776544432 1 11234
Q ss_pred HHHHHHHhhC-CceEEeec------CCCcCC----CCCeEEEeec-CCCCHHHHHHHHHHHHHHHHHh
Q 046230 412 PAFSRECLRQ-NVAVVTVA------FPATPL----LLARARICIS-ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 412 ~~~~~~l~~~-Gi~v~~~~------~p~~~~----~~~~iRi~~~-~~~t~edid~~l~~l~~~~~~~ 467 (489)
..++-+|... ||-..-.+ .|.+.. .-..+|+++| -.-|.+.+|.+.+++..+.++-
T Consensus 375 ~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 375 HALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred HHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 5677777665 77654422 222211 1257999987 4579999999999999887653
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.56 E-value=7.4e-13 Score=134.81 Aligned_cols=282 Identities=18% Similarity=0.185 Sum_probs=181.9
Q ss_pred hHHHHHHHHHHHhCCCCEEEeCccHHH-HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----------
Q 046230 147 VHNELEECVARFVGKPAAIVFGMGYVT-NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---------- 215 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sG~~a-~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---------- 215 (489)
...+.++..|+.+|.+...++.+||++ |..++.+.+.+||+|++++.+|-|+..++-++|+.++.+...
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCC
Confidence 347888889999999999999888766 599999999999999999999999999999999998876432
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCc-cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccc
Q 046230 216 -TPSHLEEVLREQIAEGQPRTHRPWK-KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293 (489)
Q Consensus 216 -d~~~Le~~l~~~~~~g~~~~~~~~~-~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~ 293 (489)
+.+.+++.+.++ +.. +.+|++.+.| .|...++++|+++++++++++.+||+|.+ .++..+.. .+
T Consensus 151 I~~~~~~~~l~~~----------~~~~k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~-~~~~~~~l-~~ 216 (557)
T COG1982 151 IPLETFKEALLAH----------PDAEKLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPA-HFDFSPML-PE 216 (557)
T ss_pred CCHHHHHHHHHhC----------hhhheeEEEecCcc--ceEeecHHHHHHHHhhcCceEEhhhcCcc-cccccccC-cc
Confidence 678888877664 234 7888888877 48899999999999999999999999972 12222211 11
Q ss_pred ccCCCCCCccEEEcccccccCCcc--eEEEeCH-------HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCC
Q 046230 294 LLEVDTADVDIMMGTFTKSFGSCG--GYIAGSK-------ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS 364 (489)
Q Consensus 294 ~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~-------~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~ 364 (489)
... ....|+++-|.+|.+++.- ++|-.+. .+-+.+... -+++.+.+.+|..-. -+...+.
T Consensus 217 -~~~-~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h-----~STSPsY~l~ASlD~-Ar~~~~~--- 285 (557)
T COG1982 217 -SAL-NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMH-----QSTSPSYPLMASLDV-ARMQEGN--- 285 (557)
T ss_pred -hhh-hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHH-----ccCCchHHHHHHHHH-HHHhhhh---
Confidence 111 1345899999999997522 5554432 222222211 122333344443333 2222221
Q ss_pred chHHHH----HHHHHHHHHHHHHHHHhC-CCeeeCCCC--------------------CCeEEEEe--CCCCcHHHHHHH
Q 046230 365 SRGAQK----LARIRENSNFFRSELQKM-GFEVLGDND--------------------SPVMPIML--YNPAKIPAFSRE 417 (489)
Q Consensus 365 ~~~~~~----~~~~~~~~~~l~~~L~~~-g~~v~~~~~--------------------~~~~~~~~--~~~~~~~~~~~~ 417 (489)
.+..+ ++..-+.++.+++...++ ++++..+.. -|..-... ........+.+.
T Consensus 286 -~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~ 364 (557)
T COG1982 286 -AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKY 364 (557)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHH
Confidence 33444 556666667777777666 455543331 11111111 223356688999
Q ss_pred HhhCCceEEeecCCCcCCCCCeEEEeecC--CCCHHHHHHHHHHHH
Q 046230 418 CLRQNVAVVTVAFPATPLLLARARICISA--SHTKEDLIKALEVIS 461 (489)
Q Consensus 418 l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~--~~t~edid~~l~~l~ 461 (489)
|.++|+...- .+...+-+.++. ..+..+++.+++.+.
T Consensus 365 L~e~gii~e~-------~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 365 LREHGIIPEE-------TGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHcCCeeee-------cCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 9999998773 122333333332 345566666666665
No 365
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=5.4e-13 Score=120.79 Aligned_cols=283 Identities=17% Similarity=0.159 Sum_probs=189.9
Q ss_pred HHHHHHHHHHhCC-CCEEEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHH
Q 046230 149 NELEECVARFVGK-PAAIVFGMGYVTN-SAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHL 220 (489)
Q Consensus 149 ~~l~~~la~~~g~-~~~i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~L 220 (489)
.++...++.--+. .+.+.++.|+... ..++++.+.|| +.|+.-.|+|+.+...+...++.++.++.+ +.+++
T Consensus 72 k~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai 151 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAI 151 (375)
T ss_pred chhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHH
Confidence 3444444443332 4788899999887 89999999998 788888899988877778889999988876 67777
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc-CcEEEEEcccccccccCCC---CccccccC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY-KAYIYLDEAHSIGAVGKTG---RGVCELLE 296 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~-~~~li~DEa~s~g~~g~~G---~~~~~~~~ 296 (489)
.+.++.. ....++++.+..+++|.+.....|.++.+-- +.++++||+|- .|.-.+ .++.++
T Consensus 152 ~evl~~d-----------s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi--dFsg~~S~~~lV~kY-- 216 (375)
T KOG0633|consen 152 AEVLELD-----------SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI--DFSGVESRMKLVKKY-- 216 (375)
T ss_pred HHHHhcc-----------ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE--eeccccccchHhHhC--
Confidence 7777652 2334555566678899887766666665443 78999999987 443222 122222
Q ss_pred CCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
| .-+++.||||+||.+| ||.+.+.++++.+.....++.-+ .+...+++++|.- .+.+..+..++.
T Consensus 217 --p--NLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS----~~~s~~AL~Als~----~n~kkme~~rda 284 (375)
T KOG0633|consen 217 --P--NLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNIS----VAGSVAALAALSD----SNGKKMEDVRDA 284 (375)
T ss_pred --C--ceeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCcccc----chhHHHHHHhcCc----ccchHHHHHHHH
Confidence 2 2477789999999999 99999999999998888776533 3334444444431 112245677777
Q ss_pred HHHHHHHHHHHHHhCCC-e-eeCCCCCCeEEEEeCCCC--cHHHHH-HHHhhCCceEEeecCCCcCCCCCeEEEeecCCC
Q 046230 374 IRENSNFFRSELQKMGF-E-VLGDNDSPVMPIMLYNPA--KIPAFS-RECLRQNVAVVTVAFPATPLLLARARICISASH 448 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~g~-~-v~~~~~~~~~~~~~~~~~--~~~~~~-~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~ 448 (489)
+.+...++-..|.++.+ . ..+...+.++-+.+.... .+..+. +.+.++||.++.-+ ..+.-++.+|++. -
T Consensus 285 iv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrg--se~~c~G~lRitv---G 359 (375)
T KOG0633|consen 285 IVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRG--SEEGCKGYLRITV---G 359 (375)
T ss_pred HHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcC--CccccceeEEEEc---C
Confidence 77777788888888733 2 234445555555554332 233344 44455699988422 2233467899998 4
Q ss_pred CHHHHHHHHHHHHHH
Q 046230 449 TKEDLIKALEVISRV 463 (489)
Q Consensus 449 t~edid~~l~~l~~~ 463 (489)
|+|+-+.+++.++++
T Consensus 360 t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 360 TPEENTVLMKCLKQF 374 (375)
T ss_pred CcccchHHHHHHHhh
Confidence 678888888888764
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.50 E-value=1.1e-11 Score=120.38 Aligned_cols=299 Identities=17% Similarity=0.170 Sum_probs=202.1
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEe-CccHHHH---HHhHhhhc-----CCCCEEEEcCCCchHHHHHHHhcCCeEEEec
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVF-GMGYVTN---SAILPVLM-----RKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~---~~~~~al~-----~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~ 213 (489)
|..++..+|++.|++..|.+.+-+. ++|++.- ..+++++. ...++++++...|+.....+.+.|.+++.++
T Consensus 106 G~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~ 185 (496)
T COG1003 106 GYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEe
Confidence 5567778999999999999876655 6777663 56666653 2567999999999999999999999999998
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC-CChHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 214 HN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL-CKFPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~-~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
.+ |+++|++++.+ +.+++++-.. |.-|.. ..+.+|+++.+++|..|+.|.|---+.+|..
T Consensus 186 ~~~~G~VDlddLk~k~~~-------------~~AalMiTnP-sT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~ 251 (496)
T COG1003 186 CDENGNVDLDDLRAKAED-------------NLAALMITNP-STLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLA 251 (496)
T ss_pred cCCCCCccHHHHHHHhcc-------------ceeEEEeccC-cccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccc
Confidence 76 89999998875 4555555433 334555 4599999999999999999999664455543
Q ss_pred CCccccccCCCCCCccEEEcccccccC------Ccc-eEEEeCHHHHHHHHh----hCCC-ccc------------ccCC
Q 046230 288 GRGVCELLEVDTADVDIMMGTFTKSFG------SCG-GYIAGSKELIQYLKY----TCPA-HLY------------ATSI 343 (489)
Q Consensus 288 G~~~~~~~~v~p~~~Di~~~t~sK~~g------~~G-G~i~~~~~~~~~l~~----~~~~-~~~------------~~~~ 343 (489)
-.+ .+|. ||+=--++|.|. ++| |-|..+++++..+.. .... +.. ..-+
T Consensus 252 rPG---d~G~-----DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 252 RPG---DMGF-----DVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred ccc---cccc-----ceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence 222 2222 566558899883 223 777777777766543 1100 000 0113
Q ss_pred CHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeC------CCCcHHHHHH
Q 046230 344 SPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLY------NPAKIPAFSR 416 (489)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~------~~~~~~~~~~ 416 (489)
|..+..-+++-+..+ +.+...+.-+..--|++|+.++|+.. .+...+.....-=+++-. ......++++
T Consensus 324 s~~il~~a~~YI~~m----G~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAK 399 (496)
T COG1003 324 SASILPIAWAYIRMM----GADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAK 399 (496)
T ss_pred cchHHHHHHHHHHHH----hHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHH
Confidence 344444455544443 34445666667778899999999873 222222110110111111 2346779999
Q ss_pred HHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 417 ECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 417 ~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
+|++.|++.-...||.. -.+.+-|-|+-.-+++++|++++++.++.++...
T Consensus 400 rLlD~GfHaPT~~FPli--V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 400 RLLDYGFHAPTMYFPLI--VAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred HHHhcCCCCCcccCccc--cccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999876777622 2356888888889999999999999999887653
No 367
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=7.4e-11 Score=113.55 Aligned_cols=323 Identities=14% Similarity=0.129 Sum_probs=202.0
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCC--CCCcccCCCcchhHHHHHHHHHHHh-CCC---------CEEEeC
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPS--TCSSRVDGGTLMVHNELEECVARFV-GKP---------AAIVFG 168 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~--~~~~~~~~g~~~~~~~l~~~la~~~-g~~---------~~i~~~ 168 (489)
.-||++-..|-.-.+. +.+..+++++=+..... .-.+....|. .++.+.+++++ |.+ ..+-..
T Consensus 27 ~KVNLgIGvY~de~Gk-~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~----~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~ 101 (396)
T COG1448 27 NKVNLGIGVYKDEDGK-TPVLRAVKKAEKRLLEQEKTKNYLPIEGL----PEFLEAVQKLLFGADSPALAEDRVATVQTL 101 (396)
T ss_pred CeeeeeeeeeeCCCCC-cchhHHHHHHHHHhhccccccccCCcCCc----HHHHHHHHHHhcCCCcHHHHhhhHhheecC
Confidence 4678764444443333 34566666554443221 1122233344 66777777764 432 233447
Q ss_pred ccHHHHHHhHh--hhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 169 MGYVTNSAILP--VLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 169 sG~~a~~~~~~--al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
+||.|...... ....+...|.+++|+|+....-....|.++..+++- |.+.+-..|+.. +.
T Consensus 102 GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a----------~~ 171 (396)
T COG1448 102 GGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA----------PE 171 (396)
T ss_pred CcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC----------CC
Confidence 78888733333 334567789999999999888888999999888754 455555555543 34
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc----cccccCCCCCCccEEEcccccc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG----VCELLEVDTADVDIMMGTFTKS 312 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~----~~~~~~v~p~~~Di~~~t~sK~ 312 (489)
+.++++=+..+||||.-.. +++|.++.++.+.+-++|=||- +|+....- +-......+ + -++..||||.
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQ--GF~~GleeDa~~lR~~a~~~~-~-~lva~S~SKn 247 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQ--GFADGLEEDAYALRLFAEVGP-E-LLVASSFSKN 247 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhh--hhccchHHHHHHHHHHHHhCC-c-EEEEehhhhh
Confidence 5666667889999996533 8899999999999999999998 77654321 111111222 1 4788999999
Q ss_pred cCCcc---eE---EEeCHHHHHHHHh----hCCCcccccCCCHHHHHHHHHHH-H--HHHccCCCchHHHHHHHHHHHHH
Q 046230 313 FGSCG---GY---IAGSKELIQYLKY----TCPAHLYATSISPPAAEQIISAI-K--VILGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 313 ~g~~G---G~---i~~~~~~~~~l~~----~~~~~~~~~~~~p~~~aa~~a~L-~--~i~~~~~~~~~~~~~~~~~~~~~ 379 (489)
||..| |+ ++.+++..+.+.. ..+ ..|+ .+|.--+++.+++ + .+.. ....+.+..++++.+++.
T Consensus 248 fgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR-~~yS--nPP~~Ga~vva~IL~~p~Lra-~W~~El~~Mr~Ri~~mR~ 323 (396)
T COG1448 248 FGLYGERVGALSVVAEDAEEADRVLSQLKAIIR-TNYS--NPPAHGAAVVATILNNPELRA-EWEQELEEMRQRILEMRQ 323 (396)
T ss_pred hhhhhhccceeEEEeCCHHHHHHHHHHHHHHHH-hccC--CCchhhHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99877 33 4455665554432 112 1243 5554444444332 1 1110 012256778899999999
Q ss_pred HHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 380 FFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 380 ~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
.|.+.|++. .|..+....++ +.+......++ .+|+++ ||+++.. =|||+. .+++..++
T Consensus 324 ~lv~~L~~~~~~~~f~~i~~Q~GM----Fsy~Gls~~QV-~rLree~~IY~v~s-----------GRi~va-Gl~~~ni~ 386 (396)
T COG1448 324 ALVDALKALGAPRNFDFIISQRGM----FSYTGLSPEQV-DRLREEFGIYLVAS-----------GRINVA-GLNTSNID 386 (396)
T ss_pred HHHHHHHhhCCCcccchHhhcCce----eecCCCCHHHH-HHHHHhccEEEecC-----------Ceeeec-cCChhhHH
Confidence 999999985 46666666663 34444444454 445555 9999821 288984 78999999
Q ss_pred HHHHHHHHH
Q 046230 455 KALEVISRV 463 (489)
Q Consensus 455 ~~l~~l~~~ 463 (489)
.++++|.++
T Consensus 387 ~va~ai~~v 395 (396)
T COG1448 387 YVAKAIAAV 395 (396)
T ss_pred HHHHHHHhh
Confidence 999999875
No 368
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=1.2e-11 Score=118.33 Aligned_cols=350 Identities=16% Similarity=0.144 Sum_probs=206.9
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEEeCccH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIVFGMGY 171 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sG~ 171 (489)
+++|-++-+ .-|..++.+..+++.+...|...|-+.+++....|. .-+++.+|++..+ ++.|+.|+|.
T Consensus 70 RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gGs~GaYS~SqGv----~~vR~~VA~~I~rRDG~p~~p~dI~LT~GA 145 (475)
T KOG0258|consen 70 RQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGGSLGAYSDSQGV----PGVRKHVAEFIERRDGIPADPEDIFLTTGA 145 (475)
T ss_pred HHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCCcccccccccCC----hhHHHHHHHHHHhccCCCCCHHHeeecCCC
Confidence 345555433 334444344455555555666544455555555555 5677777777643 3568888887
Q ss_pred HHH-HHhHhhh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 172 VTN-SAILPVL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 172 ~a~-~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.. ..++..+ .++++-|+++-|-|+-+...+.+.|+..+.+-.+ |.++|++.+.++...- ..++
T Consensus 146 S~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i-------~~r~ 218 (475)
T KOG0258|consen 146 SPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGI-------NPRA 218 (475)
T ss_pred cHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccC-------CceE
Confidence 665 5555554 4678899999999999988888888877765332 8899999999876322 3456
Q ss_pred EEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCc-----cccccC-CCCCCcc-EEEcccccc
Q 046230 243 MVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-----VCELLE-VDTADVD-IMMGTFTKS 312 (489)
Q Consensus 243 ~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-----~~~~~~-v~p~~~D-i~~~t~sK~ 312 (489)
++|+.| -+++|.+ ..+++|+..|.+++++|+.||+|---.+-...+. +.-..| .-+..+- +-.+|.||+
T Consensus 219 lvvINP-GNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKG 297 (475)
T KOG0258|consen 219 LVVINP-GNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKG 297 (475)
T ss_pred EEEECC-CCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeeccccc
Confidence 666654 4678866 5699999999999999999999863333222121 111112 1121221 233577898
Q ss_pred c-C---CcceEEEe---CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHcc-------CCCchHHHHHHHHHHHH
Q 046230 313 F-G---SCGGYIAG---SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGE-------DGSSRGAQKLARIRENS 378 (489)
Q Consensus 313 ~-g---~~GG~i~~---~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~-------~~~~~~~~~~~~~~~~~ 378 (489)
+ | ..|||+-. +++..+.+...... ...|....++...+.+-.-. ....+.+...+.++.++
T Consensus 298 y~gECG~RGGYmEv~n~~prv~~qi~Kl~si-----~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra 372 (475)
T KOG0258|consen 298 YMGECGQRGGYMESLNRDPRVKQQIKKLASI-----KLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRA 372 (475)
T ss_pred ceeeecccCCeeecccCChhHHHHHHHHHhh-----hhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHh
Confidence 7 3 33488732 34444444322110 01111222222111110000 01225677888889999
Q ss_pred HHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHH------------HHHHHHhhC-CceEEeecCCCcCCCCCeEEEee
Q 046230 379 NFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIP------------AFSRECLRQ-NVAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 379 ~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~ 444 (489)
..+.+.++++ |+.+....+.....-.+..|.++. -.+.+|++. ||.++|..-.....|..++|.++
T Consensus 373 ~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~Ti 452 (475)
T KOG0258|consen 373 KLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTI 452 (475)
T ss_pred HHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEee
Confidence 9999999998 877766655543333333333322 245677777 99999943334456778899887
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 445 SASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 445 ~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
- .+. + ..++++.++-+++..+|
T Consensus 453 L---p~~-~-~~i~~~~~fH~~f~~~Y 474 (475)
T KOG0258|consen 453 L---PPG-L-EIIEKFKKFHAEFMDEY 474 (475)
T ss_pred c---Cch-h-HHHHHHHHHHHHHHHhh
Confidence 2 222 4 66677766665554443
No 369
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.43 E-value=1.9e-10 Score=121.19 Aligned_cols=288 Identities=17% Similarity=0.136 Sum_probs=183.1
Q ss_pred ecccc-cccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHh
Q 046230 104 NLGSY-NYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILP 179 (489)
Q Consensus 104 d~~s~-~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~ 179 (489)
.+.|. .|+|+-..++.....+.+.+.. ++.+..+.....+++.+..++-+.+++++|.+ ...++++||.||..++.
T Consensus 79 ~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~ 158 (608)
T TIGR03811 79 PWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLW 158 (608)
T ss_pred CCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHH
Confidence 44555 6777766655555555554443 45544444445566777788888889988865 46778999999933222
Q ss_pred hhcC------------C----------------------------------------------CCEEEEcCCCchHHHHH
Q 046230 180 VLMR------------K----------------------------------------------GSLIISDSLNHNSIVNG 201 (489)
Q Consensus 180 al~~------------~----------------------------------------------g~~Vl~~~~~h~~~~~~ 201 (489)
+... + --.++++...|.|+..+
T Consensus 159 ~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KA 238 (608)
T TIGR03811 159 YARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKA 238 (608)
T ss_pred HHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHH
Confidence 2110 0 00588888899999999
Q ss_pred HHhcCC---eEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH---HHcC
Q 046230 202 ARGSGA---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC---KKYK 270 (489)
Q Consensus 202 ~~~~g~---~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~---~~~~ 270 (489)
+.+.|. .++.++.+ |+++|++.|++...+|.| +.+|+.---.+.+|.+.|+++|.++| +++|
T Consensus 239 a~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p-------~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~g 311 (608)
T TIGR03811 239 ADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTP-------ILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEG 311 (608)
T ss_pred HHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCC-------eEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcC
Confidence 999987 46777754 899999999987776532 33444333345689999999999999 6788
Q ss_pred c--EEEEEcccccccccC----C--CCc--------------------------c-ccccCCCCCCccEEEcccccccCC
Q 046230 271 A--YIYLDEAHSIGAVGK----T--GRG--------------------------V-CELLEVDTADVDIMMGTFTKSFGS 315 (489)
Q Consensus 271 ~--~li~DEa~s~g~~g~----~--G~~--------------------------~-~~~~~v~p~~~Di~~~t~sK~~g~ 315 (489)
+ +|++|.|++ ++.. . +.. . ....++ ..+|-+.-.++|++..
T Consensus 312 l~~~lHVDAAyG--G~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~ 387 (608)
T TIGR03811 312 IYFYLHVDAAYG--GYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI--SEAESVTIDPHKMGYI 387 (608)
T ss_pred CceeEeeecccc--chhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC--cCceEEEeCccccccc
Confidence 7 799999998 5321 0 000 0 011133 3568887799999853
Q ss_pred c-c-e-EEEeCHHHHHHHHhhCCCcc-------------cccCCCH--HHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 316 C-G-G-YIAGSKELIQYLKYTCPAHL-------------YATSISP--PAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 316 ~-G-G-~i~~~~~~~~~l~~~~~~~~-------------~~~~~~p--~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
+ + | +++-++++.+.+.... .+. ++..++. ..++++..+++.+- .+.+...+++++..++
T Consensus 388 Py~~G~ll~Rd~~~~~~~~~~a-~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~--~G~~Gyg~~i~~~i~~ 464 (608)
T TIGR03811 388 PYSAGGIVIQDIRMRDVISYFA-TYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLP--LNVTGYGKLIGASIEG 464 (608)
T ss_pred CCCeEEEEEeCHHHHHHHhcCc-chhccccccCcccccccceecCCccHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 3 2 5 4455566555543211 111 1112232 34666677777651 1333677888999999
Q ss_pred HHHHHHHHHhCC-------Cee--eCCCCCCeEEEEe
Q 046230 378 SNFFRSELQKMG-------FEV--LGDNDSPVMPIML 405 (489)
Q Consensus 378 ~~~l~~~L~~~g-------~~v--~~~~~~~~~~~~~ 405 (489)
++++.+.|++++ +++ ..++...++.+.+
T Consensus 465 A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~ 501 (608)
T TIGR03811 465 AHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVF 501 (608)
T ss_pred HHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEE
Confidence 999999998853 333 4445566666655
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.42 E-value=1.2e-10 Score=115.52 Aligned_cols=319 Identities=12% Similarity=0.056 Sum_probs=201.1
Q ss_pred cCCCCCCccchHHHHHHHHHhCCC---C--CCcccCCCcchhHHHHHHHHHHHhCCCC---EEEe-CccHHHHHHhHhhh
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPS---T--CSSRVDGGTLMVHNELEECVARFVGKPA---AIVF-GMGYVTNSAILPVL 181 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~---~--~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~-~sG~~a~~~~~~al 181 (489)
-|-+.-|++|.+++++.+.++... . .+.|. .-..++..+.++.|.++++.++ .+++ ++|+.+..++..-+
T Consensus 10 aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs-~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl 88 (364)
T PRK12462 10 GGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRS-SWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF 88 (364)
T ss_pred CCCcCCCHHHHHHHHHHHhcccccCcccccccccc-HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc
Confidence 454544788999999888876431 1 11111 1135677888999999998742 4444 44566668888888
Q ss_pred cCCCC-EE-EEcCCCchHHHH-HHHhcCCeEEEecC---CCHHHH--HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 182 MRKGS-LI-ISDSLNHNSIVN-GARGSGATIRVFQH---NTPSHL--EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 182 ~~~g~-~V-l~~~~~h~~~~~-~~~~~g~~~~~~~~---~d~~~L--e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
.++++ ++ ++....|+.-.. -++..| .+..+.. .+...+ .+.++.. ++... |.+-..-+.+
T Consensus 89 l~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~~~----------~d~~~-v~~t~NETst 156 (364)
T PRK12462 89 SRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELDWD----------ARAPF-RHYVSNETVE 156 (364)
T ss_pred CCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhccC----------CCCcE-EEEccCCCCc
Confidence 88887 44 466666665432 333334 3333321 111111 1112110 12233 3332233335
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHh
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKY 332 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~ 332 (489)
|...+ ++.+.+++++|+|-+-++|.- .+++ ++.|++..+.-|.+|++| +.++.+++.++....
T Consensus 157 Gv~~~-----~~~~~~~~llvvD~sS~~~s~---------pid~--~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~ 220 (364)
T PRK12462 157 GLQFP-----DAAGLPDSPLIADMSSDFMSR---------PFDV--EAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPD 220 (364)
T ss_pred eEecC-----cccccCCCeEEEEcCchhhCC---------CCCh--HHccEEEeeccccCCCCceEEEEECHHHHhhccc
Confidence 66554 333346899999999885521 3343 344899999999999999 888889888776543
Q ss_pred hCCC-----------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ce---eeCCCC
Q 046230 333 TCPA-----------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FE---VLGDND 397 (489)
Q Consensus 333 ~~~~-----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~---v~~~~~ 397 (489)
.... ..+ .+.+-....++..+|+.|..+. +..+.+.++.+++++.+++.+.+.. +- +....+
T Consensus 221 ~~p~~ldy~~~~~~~s~~-nTPpv~~iy~l~~~l~~i~~e~--GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~R 297 (364)
T PRK12462 221 TLPPMLDFRTHVEHRSNY-NTPPVFAIYVMALVLRWIRDEI--GGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAAR 297 (364)
T ss_pred cCCchhhHHHHHhcCCCC-CCchHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence 2111 111 1345556777888889885311 2568889999999999999999984 43 222334
Q ss_pred CC-eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 398 SP-VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 398 ~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
|. -+++.+.++....+|.+.+.++|+... -++..+ +.+|.++--+++.|+++.+++-++++-++
T Consensus 298 S~mnv~f~~~~~~l~~~f~~~a~~~gl~~l-kGhr~v----gg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 298 STMNVAFRFRQPRLDTLFKEQSTEAGFCGL-SGHRSI----GGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CcceEEEEcCCHHHHHHHHHHHHHCCCccc-cCCccc----CceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 43 356666777777899999999999875 333322 45999988899999999999998887653
No 371
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.41 E-value=2.7e-10 Score=109.96 Aligned_cols=308 Identities=15% Similarity=0.137 Sum_probs=165.7
Q ss_pred CcchhHHHHHHHHHHHhCCC--CEEEeCccHHHH--HHhHhhhc------------CCCCEEEEcCCCchHHHHHHHhcC
Q 046230 143 GTLMVHNELEECVARFVGKP--AAIVFGMGYVTN--SAILPVLM------------RKGSLIISDSLNHNSIVNGARGSG 206 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~--~~~~~al~------------~~g~~Vl~~~~~h~~~~~~~~~~g 206 (489)
|..+...|+++..|+++|.+ ..++.++.|-.. ..+..++. .+.-..+++.|.|-..+.-+...|
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 55566689999999999975 344444444443 33333332 124478999999999888999999
Q ss_pred CeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH----HHcCcEEEEEcc
Q 046230 207 ATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC----KKYKAYIYLDEA 278 (489)
Q Consensus 207 ~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~----~~~~~~li~DEa 278 (489)
.+.+.++.+ |++.+|+++.+. +..|.+.+|+.-.|++|....-+-+.+++ ...++.|+-|.+
T Consensus 146 iemi~VpM~~dGPDmD~Ve~LV~~D----------~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 146 IEMIPVPMTEDGPDMDMVEELVAED----------PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp -EEEEEEEETTEE-HHHHHHHTHTS----------TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred cEEEecCCCCCCCCHHHHHHHHhcC----------CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 999999876 999999998653 24555666666667788876655444544 457999999999
Q ss_pred cccccc-cCCCCc-------cccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCCcccccCCCHHHH
Q 046230 279 HSIGAV-GKTGRG-------VCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPAHLYATSISPPAA 348 (489)
Q Consensus 279 ~s~g~~-g~~G~~-------~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 348 (489)
|++=.+ +..-+. .|+..| .|+. -++.+|.||.- .+.| ++++++++-++.+.......+-+ ..-+-+
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AG-npdr-v~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIg--pdKvNQ 291 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAG-NPDR-VYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIG--PDKVNQ 291 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT--TTS-EEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S-----HHHH
T ss_pred ceEeeccccccchhhhHHHHHHHHcC-CCCe-EEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeC--ccHHHH
Confidence 985555 222111 112222 2433 37889999965 4446 99999998888776543211111 222222
Q ss_pred HHHHHHHHHHHccCCCchHHH----HHHHHHHHHHHHHHHHH-hCCC-eeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCC
Q 046230 349 EQIISAIKVILGEDGSSRGAQ----KLARIRENSNFFRSELQ-KMGF-EVLGDNDSPVMPIMLYNPAKIPAFSRECLRQN 422 (489)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~----~~~~~~~~~~~l~~~L~-~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 422 (489)
..-..-++-..++ -..+..+ +..+.....+.|.++|. ..|+ ....+.+++++.+.... ..+.++.+.+.+.|
T Consensus 292 LRHvrff~d~~gG-v~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G~AkrvV~lakeAG 369 (425)
T PF12897_consen 292 LRHVRFFKDAEGG-VRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-GTAKRVVELAKEAG 369 (425)
T ss_dssp HHHHHHHHSHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T-HHHHHHHHHHTT
T ss_pred HHHHHHhcChhhH-HHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-ChHHHHHHHHHHhC
Confidence 2111111110000 0001111 22222333344455555 3444 45567789988888765 45788999999999
Q ss_pred ceEEee--cCCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 423 VAVVTV--AFPAT-PLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 423 i~v~~~--~~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
|.+++. .||.. ....+.|||+|+ .-+.+|++.+++.+.-.++..
T Consensus 370 V~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 370 VALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp EE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHHHH
T ss_pred ceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 999983 34432 123568999997 678999999999998776554
No 372
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.40 E-value=2.5e-10 Score=124.31 Aligned_cols=280 Identities=14% Similarity=0.184 Sum_probs=181.7
Q ss_pred cCCCcchhHHHHHHHHHHHhCCCC--EEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHH----hcCCeEE
Q 046230 140 VDGGTLMVHNELEECVARFVGKPA--AIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGAR----GSGATIR 210 (489)
Q Consensus 140 ~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~ 210 (489)
...|..+..-+++..+++++|.+. +-+...++++..+++++.. ++++.|++++..|+.+...++ ..|.+++
T Consensus 103 isQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 103 ISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 355777888899999999999883 3555666666655555532 334789999999998775443 5677777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc-cccccCCCC
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHS-IGAVGKTGR 289 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s-~g~~g~~G~ 289 (489)
.+ |+++|++.+ +.+++++... +..|.+.++++|.+++++.|++++++--.. ++.+-+.|
T Consensus 183 ~~---~~~~l~~~~---------------~~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg- 242 (939)
T TIGR00461 183 VV---DCSDIKKAV---------------DVFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPG- 242 (939)
T ss_pred EE---cHHHHhhcC---------------CEEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHH-
Confidence 76 445444433 2345554433 447899999999999999999999955443 22222222
Q ss_pred ccccccCCCCCCccEEEccccccc------CCcc-eEEEeCHHHHHHHHhh----------CCCcccc-----------c
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSF------GSCG-GYIAGSKELIQYLKYT----------CPAHLYA-----------T 341 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~------g~~G-G~i~~~~~~~~~l~~~----------~~~~~~~-----------~ 341 (489)
-+ +.||++|+ +|.| |+++ |+++.++++...+... ...+..+ -
T Consensus 243 ----e~-----GaDi~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRek 312 (939)
T TIGR00461 243 ----HY-----GADIVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDK 312 (939)
T ss_pred ----Hc-----CCcEEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccc
Confidence 12 33888753 3433 3444 9999998877665210 0011110 0
Q ss_pred CCCHHHHHHHHH----H--HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHH
Q 046230 342 SISPPAAEQIIS----A--IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 342 ~~~p~~~aa~~a----~--L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 415 (489)
..+..+.++++- + +..+ ++...++.-++...+..++.+.|++.|+++..+.--.-+.+.+. .....++.
T Consensus 313 AtSNICt~qaL~a~~a~~Y~~~~----G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~-~~~~~~i~ 387 (939)
T TIGR00461 313 ATSNICTAQVLLANVASSYCVYH----GPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVG-NGISSELL 387 (939)
T ss_pred cCcchhHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeC-CCCHHHHH
Confidence 122233333322 2 2332 44456677778888999999999999998765421112222231 13578899
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
+++.++||.+.. ...+.+++|+.-.+|++||+.+++.+.
T Consensus 388 ~~~~~~gi~l~~-------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 388 KAAEEFNINLRA-------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHHHCCCeeee-------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 999999999773 223679999999999999999999995
No 373
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.35 E-value=1.5e-09 Score=105.82 Aligned_cols=285 Identities=18% Similarity=0.212 Sum_probs=187.6
Q ss_pred CCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHHh----cCCeEEE
Q 046230 141 DGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGARG----SGATIRV 211 (489)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~ 211 (489)
..|..+..-++...++++.|.+ .+=+.--+|.+..+++.+.. ++.+.++++...|+.+...++. .|.++..
T Consensus 115 SQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~ 194 (450)
T COG0403 115 SQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEV 194 (450)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEE
Confidence 3455666677888999999987 33344555655555555543 3468999999999998877654 3678888
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC-CCCChHHHHHHHHHcCcEEEE-EcccccccccCCCC
Q 046230 212 FQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG-ELCKFPEIIAICKKYKAYIYL-DEAHSIGAVGKTGR 289 (489)
Q Consensus 212 ~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G-~~~~l~~i~~l~~~~~~~li~-DEa~s~g~~g~~G~ 289 (489)
++.+|.++|++. .+ .....++++.+.. .| .+.++++|.+.++++|+++++ =+.-+.+.+-+.|.
T Consensus 195 ~~~~d~~~l~~~-~~------------~~~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe 260 (450)
T COG0403 195 VDADDLDDLESA-DD------------GDVFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGE 260 (450)
T ss_pred eccchhhhhhhc-cc------------cCeEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccc
Confidence 888899999987 43 3677888876654 55 667799999999999987664 34445555555553
Q ss_pred ccccccCCCCCCccEEEccccc-----ccCCcc-eEEEeCHHHHHHH----------------------------HhhCC
Q 046230 290 GVCELLEVDTADVDIMMGTFTK-----SFGSCG-GYIAGSKELIQYL----------------------------KYTCP 335 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK-----~~g~~G-G~i~~~~~~~~~l----------------------------~~~~~ 335 (489)
. | .||++|+..- +||++. ||.+.++++...+ |+.+.
T Consensus 261 ~-----G-----ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKA 330 (450)
T COG0403 261 F-----G-----ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKA 330 (450)
T ss_pred c-----C-----CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhcc
Confidence 2 2 2888876443 334333 8998888775433 11111
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCCCeEEEEeCCC-CcHH
Q 046230 336 AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVLGDNDSPVMPIMLYNP-AKIP 412 (489)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~-~~~~ 412 (489)
...- +.+...+|.+.+..-.+ .++....+.-++..++..++.++|++. |+.+... ..+--+.+..+ ....
T Consensus 331 TSNI--CTnQaLlA~~As~y~~~---hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~~~ 403 (450)
T COG0403 331 TSNI--CTNQALLALAASMYAVY---HGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEEVAE 403 (450)
T ss_pred chhh--hHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchhHHH
Confidence 1000 11222222222222222 356677888899999999999999966 5776544 33333334333 4456
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+..+....|+-+..+. ...+-+++.-.+|+++|+.+++++...
T Consensus 404 ~l~~~~~~~G~~L~~~~-------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 404 ALLAAAIAGGINLRRVD-------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHhcCCceeeec-------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 67777777888888432 246888998899999999999998754
No 374
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.32 E-value=1.9e-10 Score=112.54 Aligned_cols=226 Identities=17% Similarity=0.188 Sum_probs=155.8
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCC-cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEE
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG-TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLII 189 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g-~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl 189 (489)
+|-+--+|+..+++.+.+..+-.- ......| ...-...+.+.++...+.+++.++++.+.|+..++.++..++.+|+
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~L--e~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVi 111 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVEL--ETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVV 111 (395)
T ss_pred CCCccCCHHHHHHHHHHhccccee--eeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEE
Confidence 444433688899999888874321 1111111 1122235556666666778999999999999888888887666665
Q ss_pred -----EcCCCchHHHHHHHhcCCeEEEecCC---CHHHHHHHHHHHHhcCCCCCCCCCccEEE-EEcCcCCCCCCCCChH
Q 046230 190 -----SDSLNHNSIVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTHRPWKKIMV-IVEGIYSMEGELCKFP 260 (489)
Q Consensus 190 -----~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~~Le~~l~~~~~~g~~~~~~~~~~~~v-ive~v~s~~G~~~~l~ 260 (489)
++ ++|+++...+++.|+..+.+... ...+++.+|.+. ...++ +..+-+..+ ...+++
T Consensus 112 s~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~------------ta~llkV~s~~~~f~-~~l~~~ 177 (395)
T COG1921 112 SRGELVE-GGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINEN------------TALLLKVHSSNYGFT-GMLSEE 177 (395)
T ss_pred Ecccccc-CCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccC------------CeeEEEEeecccccc-ccccHH
Confidence 33 68889999999999999988644 678888888762 33333 233322222 124688
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEeCHHHHHHHHhhCCCccc
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKELIQYLKYTCPAHLY 339 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~~~~~l~~~~~~~~~ 339 (489)
+++++|+++|+++|+|.+-. ..-+.-....+.... ++|+++.|-.|.||++ +|.|+|++++++.++..... +
T Consensus 178 ~l~~ia~~~~lpvivD~aSg--~~v~~e~~l~~~la~---GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~--R 250 (395)
T COG1921 178 ELVEIAHEKGLPVIVDLASG--ALVDKEPDLREALAL---GADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLK--R 250 (395)
T ss_pred HHHHHHHHcCCCEEEecCCc--cccccccchhHHHhc---CCCEEEEecchhcCCCccceEechHHHHHHHHhhhhh--h
Confidence 89999999999999999976 332211112223322 3499988999999654 59999999999998865543 4
Q ss_pred ccCCCHHHHHHHHHHHHHHH
Q 046230 340 ATSISPPAAEQIISAIKVIL 359 (489)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~ 359 (489)
+.-..++.+++..++|+.+.
T Consensus 251 alrv~K~tla~l~~aLe~y~ 270 (395)
T COG1921 251 ALRVDKETLAALEAALELYL 270 (395)
T ss_pred hhhcCcHhHHHHHHHHHHHc
Confidence 44578889999999999873
No 375
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.32 E-value=8.4e-10 Score=104.92 Aligned_cols=322 Identities=20% Similarity=0.191 Sum_probs=190.0
Q ss_pred ccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHH----HHHHHhCCC-----CEEEeCccHHHHHHhHhhhcCCCCE
Q 046230 118 EYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEE----CVARFVGKP-----AAIVFGMGYVTNSAILPVLMRKGSL 187 (489)
Q Consensus 118 ~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~-----~~i~~~sG~~a~~~~~~al~~~g~~ 187 (489)
..|.+|+-..|.+ |..+..+.|.. |.++...++|. +-.+.++.+ -.+---||+-||.++-.++..|++.
T Consensus 54 ~aVmeAlGS~ltNKYSEGyPG~RYY-GGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~R 132 (477)
T KOG2467|consen 54 RAVMEALGSCLTNKYSEGYPGARYY-GGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHER 132 (477)
T ss_pred HHHHHHHhHHhhcccccCCCccccc-CcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCe
Confidence 3466676666654 77777777655 44455554432 222345543 2344479999999999999999998
Q ss_pred EEE---cCCCchH---HHHHHHhcCCeEE----EecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 188 IIS---DSLNHNS---IVNGARGSGATIR----VFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 188 Vl~---~~~~h~~---~~~~~~~~g~~~~----~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
|.- ++..|-+ ....-+.+...+. +++.| |.+.||+.-... ..+++|.-.+.|+
T Consensus 133 iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----------rPk~iiaG~SaY~ 201 (477)
T KOG2467|consen 133 IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----------RPKLIIAGTSAYS 201 (477)
T ss_pred eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----------CCcEEEeccccch
Confidence 763 3333322 2111112221111 12222 889998877663 2344443334443
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEEEeCHHH----
Q 046230 252 MEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSKEL---- 326 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~~~---- 326 (489)
...+.++++++|++.|++|++|=+|--|.. ..|- +.+.| +.+||++.|.+|++ |+.||.|.-++-+
T Consensus 202 ---R~~DYaR~R~Iad~~gA~Lm~DMAHISgLV-AA~v-ipsPF----ey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~ 272 (477)
T KOG2467|consen 202 ---RLIDYARFRKIADKVGAYLMADMAHISGLV-AAGV-IPSPF----EYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIK 272 (477)
T ss_pred ---hhccHHHHHHHHHhcCceeehhhhhHHHHH-hccc-CCCcc----cccceeeccccccccCCcceeEEEeccCCcCC
Confidence 245789999999999999999999964432 2221 11222 33599999999999 6667777654421
Q ss_pred -----------HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC-
Q 046230 327 -----------IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG- 394 (489)
Q Consensus 327 -----------~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~- 394 (489)
-+.+...-.+..-+. .+....+++..+|+.- .+.+.....+++.+|++.|.+.|.++|+.++.
T Consensus 273 ~k~g~~i~ydlE~kINfaVFP~lQGG-PHNhtIaalAvALkQa----~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtg 347 (477)
T KOG2467|consen 273 PKQGKEILYDLEDKINFAVFPGLQGG-PHNHTIAALAVALKQA----MTPEFKEYQKQVLKNAKALASALISRGYKLVTG 347 (477)
T ss_pred CCCCCcceechhhhhhhhccccccCC-CCcchHHHHHHHHHhh----CCHHHHHHHHHHHHHHHHHHHHHHHcCceEecC
Confidence 122211111111111 2333444455556654 35578889999999999999999999998764
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCc--CCCCCeEEEeecCCC----CHHHHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPAT--PLLLARARICISASH----TKEDLIKALEVISRVGD 465 (489)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~--~~~~~~iRi~~~~~~----t~edid~~l~~l~~~~~ 465 (489)
..+..++-+.+........-+++.++. +|.+.-..-|.. ....+.+|+.-|+-. .++|.+++.+-|.++++
T Consensus 348 GTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 348 GTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 345666555554332222333334443 666554222211 233467999877544 46888888888887764
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.32 E-value=1.9e-10 Score=115.15 Aligned_cols=279 Identities=17% Similarity=0.255 Sum_probs=152.4
Q ss_pred cCCCcchhHHHHHHHHHHHhCCCCE--EEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHh----cCCeEE
Q 046230 140 VDGGTLMVHNELEECVARFVGKPAA--IVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARG----SGATIR 210 (489)
Q Consensus 140 ~~~g~~~~~~~l~~~la~~~g~~~~--i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~ 210 (489)
...|+.+..-+++..++++.|.+.+ =+...++++..+++.+. .++++.|+++...|+.+...++. .|.+++
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 3557778888999999999999843 22334444444444433 23346899999999998875544 467777
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc--ccccccCCC
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH--SIGAVGKTG 288 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~--s~g~~g~~G 288 (489)
.++.++..... . .+.++|++..+. ..|.+.++++|.++++++|+++|+ .+- +++.+-+.|
T Consensus 184 ~~~~~~~~~~d----~------------~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pg 245 (429)
T PF02347_consen 184 EVPLDEDGTTD----D------------DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPG 245 (429)
T ss_dssp EE-BBTTCSB-----S------------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GG
T ss_pred EecccccCCcc----c------------cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChh
Confidence 77654221111 1 477888877664 478999999999999999999987 553 333333333
Q ss_pred CccccccCCCCCCccEEEcccccccC------Ccc-eEEEeCHHHHHHHHh----------hCCCcccc-----------
Q 046230 289 RGVCELLEVDTADVDIMMGTFTKSFG------SCG-GYIAGSKELIQYLKY----------TCPAHLYA----------- 340 (489)
Q Consensus 289 ~~~~~~~~v~p~~~Di~~~t~sK~~g------~~G-G~i~~~~~~~~~l~~----------~~~~~~~~----------- 340 (489)
.+| .||++|. +|.|| ++| |+++.+++++..+.. ...++..+
T Consensus 246 -----e~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrRe 314 (429)
T PF02347_consen 246 -----EYG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRRE 314 (429)
T ss_dssp -----GGT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGC
T ss_pred -----hcC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccccccc
Confidence 233 3899876 88875 333 999999887655421 00111100
Q ss_pred -----cCCCHHHHHH-HHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCC-CcHH
Q 046230 341 -----TSISPPAAEQ-IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP-AKIP 412 (489)
Q Consensus 341 -----~~~~p~~~aa-~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~-~~~~ 412 (489)
.+.|...+|. +..-+..+ +++...+.-++...++.|+.++|++. +.++... ...=.+..... ....
T Consensus 315 KAtSNIctnqaL~A~~a~~Yl~~~----G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~--~f~e~v~~~~~~~~~~ 388 (429)
T PF02347_consen 315 KATSNICTNQALLALAAAIYLAYL----GPEGLREIAERIHLNAHYLAERLKKIYGLPFDNP--FFFEFVVVFSKDKEVE 388 (429)
T ss_dssp CSTT---SS-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSS--SBSSEEEEESS-HHHH
T ss_pred chhhhhhhhHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC--CceeeeeecCCcHHHH
Confidence 0123333322 22222222 34466778888899999999999997 3333221 11111222222 2223
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
++.+++...|+.. .+ ...+.+-+|++-.+|++|||+++++|
T Consensus 389 ~l~~~~~~~gl~~---~~----~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 389 ELLKRGIEGGLNL---RY----PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHHTT----EEE---GG----G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHHhcCCCc---cc----cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 3444444455222 22 12348999999999999999999875
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.31 E-value=1.2e-09 Score=104.85 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=144.9
Q ss_pred CCCcchh-HHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH-HH----------Hhc
Q 046230 141 DGGTLMV-HNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN-GA----------RGS 205 (489)
Q Consensus 141 ~~g~~~~-~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~-~~----------~~~ 205 (489)
.+|..+. .+.|++-.|+.++.|++++ |.|||.|...++..+..|||.+++-...-.-+.. .+ +-.
T Consensus 48 GYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~ 127 (403)
T PF06838_consen 48 GYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEF 127 (403)
T ss_dssp TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGG
T ss_pred cCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHh
Confidence 3454444 5678888999999999988 6899999999999999999999865444333222 22 223
Q ss_pred CCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEE-cCcCCCC--CCCCChHHHHHHHHHc--CcEEEE
Q 046230 206 GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIV-EGIYSME--GELCKFPEIIAICKKY--KAYIYL 275 (489)
Q Consensus 206 g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv-e~v~s~~--G~~~~l~~i~~l~~~~--~~~li~ 275 (489)
|.....++.. |.+.+++.++. ..+.+.|- ..-|+.- =++..+++++++.|+. ++++++
T Consensus 128 Gi~Y~~v~L~~dg~~D~~~i~~~~~~------------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifV 195 (403)
T PF06838_consen 128 GIKYREVPLTEDGTIDWEAIKKALKP------------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFV 195 (403)
T ss_dssp T-EEEE--B-TTSSB-HHHHHHHHHT------------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEE
T ss_pred CceeEEEeecCCCCcCHHHHHHhhcc------------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEE
Confidence 4555555433 78888888875 34444443 2223211 0123477777777776 689999
Q ss_pred EcccccccccCCCCccccccCCCCCCccEEEcccccccCC----cceEEEeCHHHHHHHHhh--CCCcccccCCCHHHHH
Q 046230 276 DEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS----CGGYIAGSKELIQYLKYT--CPAHLYATSISPPAAE 349 (489)
Q Consensus 276 DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~----~GG~i~~~~~~~~~l~~~--~~~~~~~~~~~p~~~a 349 (489)
|.+|+ -|-.+-. .-.+ ..|++.||+=|..|+ .||||++++++++..... ..+..-..+.+.-...
T Consensus 196 DNCYG--EFvE~~E----P~~v---GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R 266 (403)
T PF06838_consen 196 DNCYG--EFVETQE----PTEV---GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNR 266 (403)
T ss_dssp E-TTT--TTTSSS-----GGGG---T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHH
T ss_pred eCCcc--eeccccC----cccc---chhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHH
Confidence 99998 6643322 2222 239999999998864 349999999999976432 2221111011111111
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC----CCeEEEEeCCCCcHHHHHHHHhhC
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND----SPVMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
.....|= .-+....+..+-+.+....++++|+++.+... --+..+.+.+++....||+..++.
T Consensus 267 ~~~QGlF---------lAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~~e~l~~FC~~iQ~~ 333 (403)
T PF06838_consen 267 LMFQGLF---------LAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGSPEKLIAFCQGIQAA 333 (403)
T ss_dssp HHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SSHHHHHHHHHHHHHT
T ss_pred HHHhHHh---------hchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCCHHHHHHHHHHHHhc
Confidence 1222211 12444555555566667778889999976543 346778888888899999988875
No 378
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.27 E-value=1.5e-09 Score=106.60 Aligned_cols=327 Identities=16% Similarity=0.204 Sum_probs=211.1
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCE---EEeCccHHHHHHhHhhhc----C----CC
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAA---IVFGMGYVTNSAILPVLM----R----KG 185 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~---i~~~sG~~a~~~~~~al~----~----~g 185 (489)
++++.+-+.+.+.+++ .+......+......+.-..+|.+++.+.. ..++.||++..++.+... . ..
T Consensus 93 ~~~~~~l~~~~~~k~N--~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~ 170 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFN--PLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDK 170 (491)
T ss_pred CcchhhHHHHHHhhcC--ccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCC
Confidence 5678888888888762 233333445555556666677777776533 223555666443333321 1 23
Q ss_pred CEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh
Q 046230 186 SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF 259 (489)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l 259 (489)
..|++....|.++...++..+..++.++.+ |+..+.+.+.+ +++.++.+-.+.+.|.+.+.
T Consensus 171 p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~e-------------Nti~lv~~~~~~p~G~~e~v 237 (491)
T KOG1383|consen 171 PNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDE-------------NTIMLVGSLPNFPTGEIEDV 237 (491)
T ss_pred ccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhcc-------------ceEEEEEEcCCCCccchhhH
Confidence 467888888999998888888888887765 77777777765 67788888888889999999
Q ss_pred HHHHHHHHH-cCcEEEEEcccccccccCC-CCccccccCCCCCCccEEEccccc-ccCCcc-eEEEeC-HHHHH-HHHhh
Q 046230 260 PEIIAICKK-YKAYIYLDEAHSIGAVGKT-GRGVCELLEVDTADVDIMMGTFTK-SFGSCG-GYIAGS-KELIQ-YLKYT 333 (489)
Q Consensus 260 ~~i~~l~~~-~~~~li~DEa~s~g~~g~~-G~~~~~~~~v~p~~~Di~~~t~sK-~~g~~G-G~i~~~-~~~~~-~l~~~ 333 (489)
++|.++.-| |++.+.+|.+-+ +|--. |......||..-..+--+..+-+| +|.+.| |+++-+ +++.. .+...
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~G--gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~ 315 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLG--GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFH 315 (491)
T ss_pred HHHHHHHHHHhCCceeecccCc--cccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEe
Confidence 999999999 999999999976 65432 222223455432222233334445 445556 666543 44322 11110
Q ss_pred C--CCcccc-----cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEe
Q 046230 334 C--PAHLYA-----TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIML 405 (489)
Q Consensus 334 ~--~~~~~~-----~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~ 405 (489)
. .+..|. .+-+-...++..++|=.+ +.+...+..++..++.+.+++.+++. ++.+++. |.+.+.+
T Consensus 316 ~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l----G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk---p~vs~~~ 388 (491)
T KOG1383|consen 316 TDWLGGIYASPTLNGSRPGSQVAAQWAALMSL----GEEGYRENTQNIVETARKLREGIENIKGIKIVGK---PLVSFIL 388 (491)
T ss_pred ccccCccccCcccccCCcccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhhhccccceecCC---CcEEEEE
Confidence 0 011111 112223444555555443 44467788888999999999999998 7777765 4444444
Q ss_pred CC--CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHH-HHHHHHHHHHHHHHhCCccCC
Q 046230 406 YN--PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKED-LIKALEVISRVGDLVGIKYFP 473 (489)
Q Consensus 406 ~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~ed-id~~l~~l~~~~~~~~~~~~~ 473 (489)
.. ....-++++.|.+.|..+...-+|. .+.+|+...+..++ .|+++.-|+++++++.....+
T Consensus 389 ~~s~~~~i~elsd~l~~~GW~lnalq~P~------a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~ 453 (491)
T KOG1383|consen 389 FGSNDVNIFELSDLLRKKGWILNALQFPA------AIHICVTRVHAREDVADRFVADIRKVVEELKSLPES 453 (491)
T ss_pred ccCCccchhhhhHHHHhcCcCccccCCCC------ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32 3345688999999999988655553 47888887787777 578888899999888655444
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.25 E-value=2.4e-09 Score=103.89 Aligned_cols=303 Identities=18% Similarity=0.218 Sum_probs=186.0
Q ss_pred HHHHHHHHHHhCCC---CEEEeCccHHHHHHhHhhhc--------------CCCCEEEEcCCCchHHHHHHHhcC---Ce
Q 046230 149 NELEECVARFVGKP---AAIVFGMGYVTNSAILPVLM--------------RKGSLIISDSLNHNSIVNGARGSG---AT 208 (489)
Q Consensus 149 ~~l~~~la~~~g~~---~~i~~~sG~~a~~~~~~al~--------------~~g~~Vl~~~~~h~~~~~~~~~~g---~~ 208 (489)
.++-.++.+..|-+ +.|+...|+-+|.-++.+.. -|.-++.+++-+|.|+..++...| -.
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 45555666666643 77888999999955444432 132345577888999999998887 56
Q ss_pred EEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccc
Q 046230 209 IRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGA 283 (489)
Q Consensus 209 ~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~ 283 (489)
++.++.+ ++++||+.|.++..+| +...+|-...-.+--|...||+.|+++|++|++|+++|.|.+-|.
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg-------~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGgl 296 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKG-------GVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGL 296 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcC-------CCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeeccccccc
Confidence 7777766 7999999998876665 233344332222334778999999999999999999999988333
Q ss_pred c-cCCCCccccccCCCCCCccEEEcccccccCCcc--eEEEeCH-HHHHHHHhhCCCcccc----------cCCCHHHHH
Q 046230 284 V-GKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--GYIAGSK-ELIQYLKYTCPAHLYA----------TSISPPAAE 349 (489)
Q Consensus 284 ~-g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~-~~~~~l~~~~~~~~~~----------~~~~p~~~a 349 (489)
+ .+.-|. ..-|+++. |-+.-..+|.+|.+= ++++.+. .+++...+.+..+.|. ++--...|.
T Consensus 297 LmS~k~R~--kl~Giera--~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCG 372 (510)
T KOG0629|consen 297 LMSRKHRH--KLTGIERA--NSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCG 372 (510)
T ss_pred ccChhhHh--hccCcccc--CceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcC
Confidence 3 222222 34566543 455558899998733 5554443 3444333322222221 111112222
Q ss_pred HH--HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--CCCCeEEEEeCCCC---------------
Q 046230 350 QI--ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPA--------------- 409 (489)
Q Consensus 350 a~--~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~--~~~~~~~~~~~~~~--------------- 409 (489)
-= +--|-.+....+....++.+++.-++++||.++|++. ++..+-. +....+.++ +.|.
T Consensus 373 Rh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw-~vp~~lR~~~~~~e~~~rL 451 (510)
T KOG0629|consen 373 RHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFW-YVPPSLRGWQENPERDSRL 451 (510)
T ss_pred ccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeec-cCchHhccCcccchhhhHH
Confidence 00 1112233333566678899999999999999999998 4443222 221122222 2211
Q ss_pred --cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeec-CCCCHHHHHHHHHHHHHHHH
Q 046230 410 --KIPAFSRECLRQNVAVVTVAFPATPLLLARARICIS-ASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 410 --~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~ 465 (489)
.+..+-..++++|-... +|.......+.+|+.++ .+.+.+|+|.+++.|.++.+
T Consensus 452 ~kVaPkIK~~Mm~~Gt~Mi--~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 452 VKVAPKIKERMMKKGTTMI--GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred HhhCcHHHHHHHhccceee--EecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 12256678888887655 33322234567777654 46899999999999987654
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.21 E-value=7.9e-09 Score=101.27 Aligned_cols=287 Identities=16% Similarity=0.211 Sum_probs=160.8
Q ss_pred HHhCCC---CEEEeCccHHHH-HHhHhhh--cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHH
Q 046230 157 RFVGKP---AAIVFGMGYVTN-SAILPVL--MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEE 222 (489)
Q Consensus 157 ~~~g~~---~~i~~~sG~~a~-~~~~~al--~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~ 222 (489)
+..|.. .++++...+.-. ...+.++ ....+.|+.+...|.+-+.++...|.+++.++.. |.+++|+
T Consensus 67 ~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~ 146 (389)
T PF05889_consen 67 RLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEA 146 (389)
T ss_dssp HHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHH
T ss_pred HHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHH
Confidence 344543 567776555433 3334444 3678899999999999999999999988887642 6788888
Q ss_pred HHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC
Q 046230 223 VLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK-FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 223 ~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~-l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
++++. | ...++.+...+....|...+ +++|.++|++||+..++..||++-.- ..-+-+...+. -..
T Consensus 147 ~i~~~---G-------~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~~--~GR 213 (389)
T PF05889_consen 147 KIEEL---G-------ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAWR--VGR 213 (389)
T ss_dssp HHHHH---C-------GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHHH--HST
T ss_pred HHHHh---C-------CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHHh--cCC
Confidence 88663 1 23344444444444556666 99999999999999999999984000 00000000000 012
Q ss_pred ccEEEccccccc-CCcc-eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 302 VDIMMGTFTKSF-GSCG-GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 302 ~Di~~~t~sK~~-g~~G-G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
+|+.+-|..|-| -+.| +.++++ +..++.+...-.+- .+.+|. .- ...+|..+ +.......+....+.-
T Consensus 214 vda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR---as~sp~-ld-~~itLl~L----G~~g~~~ll~~r~~~f 284 (389)
T PF05889_consen 214 VDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR---ASASPS-LD-LFITLLSL----GCTGYGALLKERKASF 284 (389)
T ss_dssp CSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH---BTSHHH-HH-HHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred cceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh---hhcccc-hH-HHHHHHHH----hhhHHHHHHHHHHHHH
Confidence 377778999988 2335 445554 56777665432221 123332 22 22233332 2224456666667777
Q ss_pred HHHHHHHHhC----CCeeeCCCCCCeEEEE-eCC--C---CcHHHHHHHHhhCCceEEeecCCCcCCC--------CCeE
Q 046230 379 NFFRSELQKM----GFEVLGDNDSPVMPIM-LYN--P---AKIPAFSRECLRQNVAVVTVAFPATPLL--------LARA 440 (489)
Q Consensus 379 ~~l~~~L~~~----g~~v~~~~~~~~~~~~-~~~--~---~~~~~~~~~l~~~Gi~v~~~~~p~~~~~--------~~~i 440 (489)
.++.++|++. +-.+...+..++...+ +.. . .....|...|..+||.-..+--|..+.. ..++
T Consensus 285 ~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Yl 364 (389)
T PF05889_consen 285 PYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYL 364 (389)
T ss_dssp HHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEE
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHH
Confidence 7888887764 5445444455543322 221 1 2345789999999665332111211111 2678
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 441 RICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 441 Ri~~~~~~t~edid~~l~~l~~~~~ 465 (489)
-++-...+++||+|.++++|+++++
T Consensus 365 t~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 365 TAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 8877778999999999999999874
No 381
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.12 E-value=1.3e-10 Score=112.73 Aligned_cols=229 Identities=21% Similarity=0.219 Sum_probs=58.8
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc-chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEE
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT-LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLII 189 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl 189 (489)
||-+.-++++.+++.+.+..|..-... ...|. ..-+..+++.++.+.|.++++++++...|+..++.+++.... |+
T Consensus 13 LGRs~l~~~a~~a~~~~a~~Y~nLE~d--l~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~E-vI 89 (367)
T PF03841_consen 13 LGRSPLSEEAIEAVAEVASGYSNLEYD--LETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGKE-VI 89 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 444444678888888888776432100 00011 111356788899999999999999999998888888765444 44
Q ss_pred EcCCCc------hHHHHHHHhcCCeEEEecCC---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCCCCC--CC
Q 046230 190 SDSLNH------NSIVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSMEGE--LC 257 (489)
Q Consensus 190 ~~~~~h------~~~~~~~~~~g~~~~~~~~~---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~~G~--~~ 257 (489)
+....- +.+...++.+|+..+.+... .+++.|++|.+ +..+++-+. +-|...|. ..
T Consensus 90 vsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e------------~Ta~ll~Vh~Sn~~i~GFt~~~ 157 (367)
T PF03841_consen 90 VSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITE------------NTAALLKVHTSNFRIQGFTGEV 157 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc------------cccccccccccccccccccccc
Confidence 333322 22445667788888877543 57788888876 233333343 33333442 35
Q ss_pred ChHHHHHHHHHcCcEEEEEccccc----ccccCCCCc-cccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHH
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHSI----GAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLK 331 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s~----g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~ 331 (489)
+++++++++++|++++|+|-.-+. ..+|..+.. +.+.. ..++|+++.|-.|.+|++- |.|+|++++++.++
T Consensus 158 ~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~---~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk 234 (367)
T PF03841_consen 158 SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL---AAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLK 234 (367)
T ss_dssp ---HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC---CCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHH
T ss_pred cHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh---hcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHh
Confidence 799999999999999999998640 012333332 32332 2456999888889998654 99999999999998
Q ss_pred hhCCCcccccCCCHHHHHHHHHHHHHHH
Q 046230 332 YTCPAHLYATSISPPAAEQIISAIKVIL 359 (489)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~ 359 (489)
.... .-..-.....+++..++|+.+.
T Consensus 235 ~~pl--~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 235 KHPL--GRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp HHHH--TTT-B--HHHHHHHHHHHHH--
T ss_pred hCCC--cceEeeCHHHHHHHHHHHHHHH
Confidence 6432 2233477888999999998774
No 382
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.06 E-value=1.1e-07 Score=103.41 Aligned_cols=279 Identities=14% Similarity=0.176 Sum_probs=172.6
Q ss_pred CCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHH----hcCCeEEE
Q 046230 141 DGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGAR----GSGATIRV 211 (489)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~ 211 (489)
..|..+..-++...++++.|.+ .+=+.--++.+..+++++.. ++...|+++...|+.+...++ ..|.+++.
T Consensus 119 sQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~ 198 (954)
T PRK12566 119 AQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV 198 (954)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE
Confidence 5577778889999999999988 33445555555544444432 235689999999998776543 34555553
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEE-cccccccccCCCCc
Q 046230 212 FQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLD-EAHSIGAVGKTGRG 290 (489)
Q Consensus 212 ~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~D-Ea~s~g~~g~~G~~ 290 (489)
+++++.+. .+.+.|++... +..|.+.++++|.+++++.|+++|+- +.-+++.+-+.|.
T Consensus 199 ------~~~~~~~~-------------~~~~~v~vq~P-~~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge- 257 (954)
T PRK12566 199 ------DAVDNLAA-------------HAVFGALLQYP-DTHGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPGE- 257 (954)
T ss_pred ------cchhhcCC-------------CCEEEEEEECC-CCceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChhh-
Confidence 34444332 24666666543 34688999999999999999876521 2234555545442
Q ss_pred cccccCCCCCCccEEEcc---ccc--ccCCcc-eEEEeCHHHHHHHHhh----------CCCcccc----------c-CC
Q 046230 291 VCELLEVDTADVDIMMGT---FTK--SFGSCG-GYIAGSKELIQYLKYT----------CPAHLYA----------T-SI 343 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t---~sK--~~g~~G-G~i~~~~~~~~~l~~~----------~~~~~~~----------~-~~ 343 (489)
+| .||++|+ |+= +||+++ ||++.++++...+.-. ...+..+ . ..
T Consensus 258 ----~G-----ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAt 328 (954)
T PRK12566 258 ----LG-----ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKAN 328 (954)
T ss_pred ----cC-----CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhcccc
Confidence 22 3888763 332 233433 9999988776544210 0000000 0 01
Q ss_pred CHHHHHHH----HHHHH-HHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHH
Q 046230 344 SPPAAEQI----ISAIK-VILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSREC 418 (489)
Q Consensus 344 ~p~~~aa~----~a~L~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l 418 (489)
+..+.+++ .+++- .+ .++....+.-++...++.++.+.|++.|+++... ..+--+.+.......++.++.
T Consensus 329 SNICT~qaL~A~~a~~Y~~~---~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~~~~~~~~~a 403 (954)
T PRK12566 329 SNICTAQVLLANIAGFYAVY---HGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGGAQAAIIESA 403 (954)
T ss_pred chhhHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccCCHHHHHHHH
Confidence 11222222 22221 22 2444455667778889999999999999887543 222222222222567888999
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
.++||-++.+ +.+.+.+++.-.+|.+|++.+++++.
T Consensus 404 ~~~~~n~r~~-------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 404 EAARINLRIL-------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHCCCeeEEe-------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 9999998843 23579999999999999999999994
No 383
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.04 E-value=3.9e-08 Score=99.79 Aligned_cols=299 Identities=16% Similarity=0.151 Sum_probs=194.2
Q ss_pred CCcchhHHHHHHHHHHHhCCCCEEEe-CccHHHH---HHhHhhhc-----CCCCEEEEcCCCchHHHHHHHhcCCeEEEe
Q 046230 142 GGTLMVHNELEECVARFVGKPAAIVF-GMGYVTN---SAILPVLM-----RKGSLIISDSLNHNSIVNGARGSGATIRVF 212 (489)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~---~~~~~al~-----~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~ 212 (489)
.|..++..+|++.|++..|.+..-+- +||.+.- ..++++.. +...+-+++...|+.....+.+.|.+++++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV 657 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV 657 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEe
Confidence 35567778999999999998866554 7777663 66677654 234567888999999888999999999988
Q ss_pred cCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 213 QHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK-FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 213 ~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~-l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
..+ |+.+|+++.+++. ++-+++++.-. |..|..++ +++++++.+++|--+++|.+-.-...|-
T Consensus 658 ~~~~~G~id~~dLk~kaekh~----------~~Laa~MvTYP-ST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 658 GCDANGNIDMVDLKAKAEKHK----------DNLAALMVTYP-STHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGL 726 (1001)
T ss_pred eccCCCCccHHHHHHHHHHhh----------hhhheeEEecc-cccccccccHHHHHHHHHhcCCEEEecCCCccceecc
Confidence 654 8999998887753 24455554322 33465544 9999999999999999999965333333
Q ss_pred CCCccccccCCCCCCccEEEccccccc----CC--cc-eEEEeCHHHHHHHHhhCCC--------c-ccccC----CCHH
Q 046230 287 TGRGVCELLEVDTADVDIMMGTFTKSF----GS--CG-GYIAGSKELIQYLKYTCPA--------H-LYATS----ISPP 346 (489)
Q Consensus 287 ~G~~~~~~~~v~p~~~Di~~~t~sK~~----g~--~G-G~i~~~~~~~~~l~~~~~~--------~-~~~~~----~~p~ 346 (489)
+..| .+|- |+.=--++|.| |+ +| |-|...+.++..+....-. . .-+.+ ++..
T Consensus 727 c~pG---d~Ga-----DV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ 798 (1001)
T KOG2040|consen 727 CRPG---DIGA-----DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSAL 798 (1001)
T ss_pred cCCc---cccc-----cceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcce
Confidence 2211 1221 44333778877 22 23 6676667666655322110 0 00112 2223
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEe--------CCCCcHHHHHHHH
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIML--------YNPAKIPAFSREC 418 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~l 418 (489)
++...++-++.+ +.....+.-+-..-|++|+.++|+..--.++....+.+-.=++ .....+.+++++|
T Consensus 799 ILpISwaYikmM----G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL 874 (1001)
T KOG2040|consen 799 ILPISWAYIKMM----GSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRL 874 (1001)
T ss_pred eehhHHHHHHHh----cccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHH
Confidence 334445555554 4445566666677789999999998732233333332211111 1234567899999
Q ss_pred hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 419 LRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++-|...-...+|. .+.+-|-|+-.-+++++|++++++..+-++.
T Consensus 875 ~DYgFHaPTmswPV----~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 875 MDYGFHAPTMSWPV----AGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred HhccCCCCcccccc----CCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 99998876555553 3678888888889999999999997776554
No 384
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.95 E-value=5e-07 Score=84.40 Aligned_cols=333 Identities=15% Similarity=0.138 Sum_probs=192.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHh------CCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKY------SPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGY 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~ 171 (489)
.+..|-||+|. ||+- |....+.+.+-+++| |+-.+-.....+. +..-..++...|. ++.+.+.+.-
T Consensus 65 d~~~iYlcGNS-LGLm--PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~D----e~il~l~~~iVGA~e~EvavmNsL 137 (465)
T KOG3846|consen 65 DKPVIYLCGNS-LGLM--PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSID----EPILPLLAPIVGAQENEVAVMNSL 137 (465)
T ss_pred CCCeEEEeccc-cccC--chhhHhHHHHHHHHHHhhhhhcccccccceeecc----hhhhhhhhhhccCCchhhhhHhhh
Confidence 46677787655 7776 334556666666664 3322222222222 4455677788886 4455554445
Q ss_pred HHH-HHhHhhhcCC---CCEEEEcCCC----chHHHHHHHhcCCeE----EEecCC-CHH--HHHHHHHHHHhcCCCCCC
Q 046230 172 VTN-SAILPVLMRK---GSLIISDSLN----HNSIVNGARGSGATI----RVFQHN-TPS--HLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 172 ~a~-~~~~~al~~~---g~~Vl~~~~~----h~~~~~~~~~~g~~~----~~~~~~-d~~--~Le~~l~~~~~~g~~~~~ 236 (489)
..| ..++..+-+| .-.|+..... |..+...+++.|..+ +.+... -.+ ..|.+|+....+|
T Consensus 138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng----- 212 (465)
T KOG3846|consen 138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG----- 212 (465)
T ss_pred hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC-----
Confidence 556 4444444433 3456665554 445667778877653 222221 111 1233333322222
Q ss_pred CCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-C
Q 046230 237 RPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-S 315 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~ 315 (489)
+..++|+..+++--+|...++.+|-..-+..|+++=.|=+|.+|-.- +-+...++|+.+-+--|-+. +
T Consensus 213 --DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVp---------L~LHdWgVDFACWCSYKYlnaG 281 (465)
T KOG3846|consen 213 --DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVP---------LQLHDWGVDFACWCSYKYLNAG 281 (465)
T ss_pred --CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCc---------eEEeecCCceEEEeeecccccC
Confidence 57788889999999999999999997777789999999999976431 11122455888878888872 2
Q ss_pred cc---eEEEeCHHHHHHHHhh---------------------CCCcccccCCCHH-HHHHHHHHHHHHHccCCCchHHHH
Q 046230 316 CG---GYIAGSKELIQYLKYT---------------------CPAHLYATSISPP-AAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 316 ~G---G~i~~~~~~~~~l~~~---------------------~~~~~~~~~~~p~-~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
+| |..+-.+..-+..... .....|.-+.+|+ ..++..++|+++.. -..+++
T Consensus 282 aGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q----~~~~~l 357 (465)
T KOG3846|consen 282 AGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQ----FNINEL 357 (465)
T ss_pred CCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHH----hhHHHH
Confidence 23 5554333221111100 0111122234444 35566778888731 124444
Q ss_pred HHHHHHHHHHHHHHHHhC-CC-----------eeeC----CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC
Q 046230 371 LARIRENSNFFRSELQKM-GF-----------EVLG----DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP 434 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~-g~-----------~v~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~ 434 (489)
+.+---...|+...++.. |. .++. +.++..+.+.+..+ ...+.++|.++|+.+. .
T Consensus 358 RkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp--~~~vfqeL~krGv~~D-k------ 428 (465)
T KOG3846|consen 358 RKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP--TPKVFQELHKRGVIGD-K------ 428 (465)
T ss_pred hhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC--chHHHHHHHHcCeecc-c------
Confidence 554444455555555443 21 1222 12344444544444 3678999999999887 2
Q ss_pred CCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHh
Q 046230 435 LLLARARICI-SASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 435 ~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...+.||++| ++..|-.|+-.++.+|.++...+
T Consensus 429 R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 429 RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred cCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 3347799995 47789999999999999988765
No 385
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.93 E-value=9.7e-07 Score=84.33 Aligned_cols=335 Identities=16% Similarity=0.149 Sum_probs=187.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
+.-+||+- ...+ ...+.+....+|-+-....++++. ...|++.+.+.+|-+..+-...|-.|-..++
T Consensus 45 edv~IDLL----TDSG--Tgams~~qwaamm~GDEAYagsrs-------~~~L~~avkdifGfq~~iPthQGRgAE~Il~ 111 (471)
T COG3033 45 EDVFIDLL----TDSG--TGAMTDKQWAAMMRGDEAYAGSRS-------YYALADAVKDIFGFQYTIPTHQGRGAENILI 111 (471)
T ss_pred cceEEEee----ccCC--cccccHHHHHHHhccchhhccccc-------HHHHHHHHHHhcCceeeeeccCCccHHHHHH
Confidence 45577763 1112 123445555555543333333332 2678899999999766665555544433333
Q ss_pred hhhc-----CCCCEEEEcCCCchHHHHH-HHhcCCeEEEec--------------CC-CHHHHHHHHHHHHhcCCCCCCC
Q 046230 179 PVLM-----RKGSLIISDSLNHNSIVNG-ARGSGATIRVFQ--------------HN-TPSHLEEVLREQIAEGQPRTHR 237 (489)
Q Consensus 179 ~al~-----~~g~~Vl~~~~~h~~~~~~-~~~~g~~~~~~~--------------~~-d~~~Le~~l~~~~~~g~~~~~~ 237 (489)
..+. .+|.+.+..+.+|..+..+ ....|+.++-+. -| |++.|+++|++.-.
T Consensus 112 ~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-------- 183 (471)
T COG3033 112 PILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-------- 183 (471)
T ss_pred HHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCc--------
Confidence 3332 3555555566666665554 455566554332 12 88999999987422
Q ss_pred CCccE-EEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccc--ccc------CCCCccc----cccCCCCCC
Q 046230 238 PWKKI-MVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIG--AVG------KTGRGVC----ELLEVDTAD 301 (489)
Q Consensus 238 ~~~~~-~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g--~~g------~~G~~~~----~~~~v~p~~ 301 (489)
.+.. ++++-+..+..|.. .+++++.++|++|++.++.|.+...- .|- ..+..+. +.+..
T Consensus 184 -~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sY---- 258 (471)
T COG3033 184 -DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSY---- 258 (471)
T ss_pred -ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhh----
Confidence 2333 33344556667754 56899999999999999999985411 111 1111111 11111
Q ss_pred ccEEEccccc-ccCCcceEEEeCHH----HHHHHHhhC---CC-cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHH
Q 046230 302 VDIMMGTFTK-SFGSCGGYIAGSKE----LIQYLKYTC---PA-HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLA 372 (489)
Q Consensus 302 ~Di~~~t~sK-~~g~~GG~i~~~~~----~~~~l~~~~---~~-~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~ 372 (489)
.|-..-|.-| ++...||+++.+++ +-..++... .+ -+|+ +++--.+.+....|.-- -..+.++
T Consensus 259 aD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG-gl~GrdmealAvGL~e~-------~~~~yl~ 330 (471)
T COG3033 259 ADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG-GLAGRDMEALAVGLREG-------VNFDYLA 330 (471)
T ss_pred hhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccccC-cccchhHHHHHHHHHHh-------cCcHHHH
Confidence 2333335445 34556899988765 333333221 11 1222 22222333333333221 1123333
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC--------CCcHHHHHHHHhhC-CceEEeecCCCc------C---
Q 046230 373 RIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN--------PAKIPAFSRECLRQ-NVAVVTVAFPAT------P--- 434 (489)
Q Consensus 373 ~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~-Gi~v~~~~~p~~------~--- 434 (489)
+--...+||.+.|.+.|++++.+.+++-+.+.... .-.+..|+.+|..+ ||-.+-.+.... +
T Consensus 331 ~Rv~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~ 410 (471)
T COG3033 331 HRVAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQH 410 (471)
T ss_pred HHHHHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccC
Confidence 33345688999999999998888888765554321 11345677777766 887765332211 1
Q ss_pred -CCCCeEEEeec-CCCCHHHHHHHHHHHHHHHHHh
Q 046230 435 -LLLARARICIS-ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 435 -~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~~~ 467 (489)
..-..+|+++| ..-|.+.+|.++++++++.+.-
T Consensus 411 ~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 411 PPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred CCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 11268999987 5679999999999998887653
No 386
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.88 E-value=2.2e-06 Score=84.53 Aligned_cols=298 Identities=13% Similarity=0.143 Sum_probs=175.7
Q ss_pred chhHHHHHHHHHHHhCC---------------CCEEEeCccHHHH-HHhHhhhc------C------------CCCEEEE
Q 046230 145 LMVHNELEECVARFVGK---------------PAAIVFGMGYVTN-SAILPVLM------R------------KGSLIIS 190 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---------------~~~i~~~sG~~a~-~~~~~al~------~------------~g~~Vl~ 190 (489)
++...|||.-+.+|+++ .-.++.+|.++++ .+++.+.. + ..-++.+
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 44456777666666542 2468889999998 44444421 1 1236778
Q ss_pred cCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC--CCCChHHHH
Q 046230 191 DSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG--ELCKFPEII 263 (489)
Q Consensus 191 ~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G--~~~~l~~i~ 263 (489)
.+-.|.++..++.+.+.+.+.++.+ +.+.|++++++.++.|- .. ++++-++ +.+| ...+|.+|.
T Consensus 188 SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGl-------IP-f~v~at~-GTT~~ca~D~l~elg 258 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGL-------IP-FFVCATL-GTTSSCAFDELEELG 258 (511)
T ss_pred cCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCC-------cc-EEEEEee-cCccccccccHHHhc
Confidence 9999999999999999998888765 67899999999888762 22 3333322 2233 346799999
Q ss_pred HHHHHcCcEEEEEcccccccccCCCCcccccc-----CCCCCCccEEEcccccccCC----cc-----e-----EEEeCH
Q 046230 264 AICKKYKAYIYLDEAHSIGAVGKTGRGVCELL-----EVDTADVDIMMGTFTKSFGS----CG-----G-----YIAGSK 324 (489)
Q Consensus 264 ~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~-----~v~p~~~Di~~~t~sK~~g~----~G-----G-----~i~~~~ 324 (489)
.+|+++|+||++|.+|+-.++ +|+.+ |++ .+|-.-...+|++-. .. | +.-.++
T Consensus 259 ~Vc~~~glWLHVDAAYAGsa~------iCpE~r~l~rGie--~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 259 PVCREEGLWLHVDAAYAGSAF------ICPEFRYLMRGIE--YADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred chhhhcCEEEEeehhhccccc------cCHHHHHHhhcch--hhccccCChhheeEEeeeeecceeecCceeeeeeecCh
Confidence 999999999999999983332 23222 232 224444455666521 01 1 111222
Q ss_pred HHHHHHHhhC-CCccc-ccC-CCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCe
Q 046230 325 ELIQYLKYTC-PAHLY-ATS-ISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPV 400 (489)
Q Consensus 325 ~~~~~l~~~~-~~~~~-~~~-~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~ 400 (489)
...++-.... ..+.+ .-+ +--.-.--..-+++.+ +.+..++.+.+..++++.|.+.+.+- .|++....--.+
T Consensus 331 ~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~----Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL 406 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSY----GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL 406 (511)
T ss_pred HhhcchhhccCCCccccccccccchhhHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce
Confidence 2222211111 11000 000 1112233344455554 22233444445555556666555543 566654433334
Q ss_pred EEEEeCC-CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCC-CCHHHHHHHHHHHHHHHHHh
Q 046230 401 MPIMLYN-PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISAS-HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 401 ~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~ 467 (489)
+++.+.. ......+.+++... .|.+.+.. -.+.-.+|+++++. .+.+|++++.+.|.+..+.+
T Consensus 407 vcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~----l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 407 VCFRLKGDNEINEALLNRLNSSGRIHLVPAS----LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred eEEeecCCcHHHHHHHHHHHhcCcEEEEEee----ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 4444433 34456788888877 78888533 35667899998765 56789999999998887764
No 387
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.66 E-value=3.3e-06 Score=78.82 Aligned_cols=250 Identities=18% Similarity=0.273 Sum_probs=146.5
Q ss_pred CCCcchh-HHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcCCCchHHH-H--HHH--------hc
Q 046230 141 DGGTLMV-HNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDSLNHNSIV-N--GAR--------GS 205 (489)
Q Consensus 141 ~~g~~~~-~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~-~--~~~--------~~ 205 (489)
.+|..++ .+.|++..|+.++.|.+++ +-||+.|+..++..+.+|||..+.-...-..+. . |++ -.
T Consensus 59 GYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred CCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 4455544 4568888899999997665 689999999999999999998775433322222 2 111 12
Q ss_pred CCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc--CcCCC--CCCCCChHHHHHHHHHc--CcEEE
Q 046230 206 GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE--GIYSM--EGELCKFPEIIAICKKY--KAYIY 274 (489)
Q Consensus 206 g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive--~v~s~--~G~~~~l~~i~~l~~~~--~~~li 274 (489)
|...+.++.. |.+.++..+++ ..+ +|.+. .-|+. .=.+..+++++++.|+- +++++
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~~------------~tk-li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivF 205 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAISD------------RTK-LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVF 205 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcCc------------cce-EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEE
Confidence 3333333332 77778777765 233 33332 22221 11235578888888886 58999
Q ss_pred EEcccccccccCCCCccccccCCCCCCccEEEcccccccCC----cceEEEeCHHHHHHHHhhCC-CcccccCCCHHHHH
Q 046230 275 LDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS----CGGYIAGSKELIQYLKYTCP-AHLYATSISPPAAE 349 (489)
Q Consensus 275 ~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~----~GG~i~~~~~~~~~l~~~~~-~~~~~~~~~p~~~a 349 (489)
+|.+|+ -|-.+-.. ..+ .+|++.||+-|.-|+ .|||+++++++++.....-. +.+-.. +.
T Consensus 206 VDNCYG--EFvE~~EP----t~v---GaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e------~G 270 (416)
T COG4100 206 VDNCYG--EFVEEKEP----THV---GADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGRE------GG 270 (416)
T ss_pred Eeccch--hhhhccCc----ccc---chhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCcccc------cc
Confidence 999998 66433221 122 349999999998875 13999999999886532111 111111 11
Q ss_pred HHHHHHHH-HHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC----CCeEEEEeCCCCcHHHHHHHHhhC
Q 046230 350 QIISAIKV-ILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND----SPVMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 350 a~~a~L~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
+.+-++.. .++- . ..+....+.-+-......-|.++|+++.+... -.+..+.+.+..+..+|++.....
T Consensus 271 at~~~l~~myqGl-F--lAPhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eKmIaFcqaiQ~a 344 (416)
T COG4100 271 ATLYSLREMYQGL-F--LAPHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEKMIAFCQAIQAA 344 (416)
T ss_pred ccHHHHHHHHhhh-c--cchHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecCCHHHHHHHHHHHhhc
Confidence 11222221 1100 0 11233333333344445556778888755432 335567777888888999888765
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.57 E-value=2.2e-05 Score=75.96 Aligned_cols=325 Identities=14% Similarity=0.124 Sum_probs=187.7
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHh-CCCC----CCcccCCCcchhHHHHHHHHHHHhCCCC--EEEeCcc--H
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKY-SPST----CSSRVDGGTLMVHNELEECVARFVGKPA--AIVFGMG--Y 171 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG--~ 171 (489)
+..||+ .|-+.-+|++.+.+++-+..+ |.+. .+.|.-. ...++.+.++.+.++++.++ .|+|..| +
T Consensus 5 ~~~nFs----aGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~-~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat 79 (365)
T COG1932 5 RVYNFS----AGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKE-FKNVLEEAEKDLRELLNIPDDYKVLFLQGGAT 79 (365)
T ss_pred CCCCCC----CCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCccH
Confidence 356676 555555788888888877774 3221 2233222 23566788888999998763 4555333 3
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHH-HHhcCCeEEEe-------cCCCHHHHHHH-HHHHHhcCCCCCCCCCccE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNG-ARGSGATIRVF-------QHNTPSHLEEV-LREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~-~~~~g~~~~~~-------~~~d~~~Le~~-l~~~~~~g~~~~~~~~~~~ 242 (489)
.+..++...+.+++..-.++..+|...-.. ++..+-.+... +...+-++.+. +. ++.+
T Consensus 80 ~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~-------------~~~a 146 (365)
T COG1932 80 GQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDFS-------------DNDA 146 (365)
T ss_pred HHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcccC-------------CCcc
Confidence 334555555655443314455555543221 22222111111 01111111110 11 1222
Q ss_pred EEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEE
Q 046230 243 MVIVEGIYSMEGELCK-FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYI 320 (489)
Q Consensus 243 ~vive~v~s~~G~~~~-l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i 320 (489)
.|..-+--+.+|...| .+.+. . +.++++|-.-. .+++ . ++-.+.|++..+--|-+|+.| +.+
T Consensus 147 yv~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~--ilsr-------~--iDvsk~dviyagaQKnlGpaGltvv 210 (365)
T COG1932 147 YVHFCWNETISGVEVPELPDIG---S--DGLLVADASSA--ILSR-------P--IDVSKYDVIYAGAQKNLGPAGLTVV 210 (365)
T ss_pred EEEEecCCcccceEccCCCCCC---C--CceEEEecccH--HhcC-------C--CChhHcceEEEehhhccCccceEEE
Confidence 2222111122343322 22221 1 17899998877 3322 2 333556899889999999999 888
Q ss_pred EeCHHHHHHHHhhCCCccc--------cc---CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 046230 321 AGSKELIQYLKYTCPAHLY--------AT---SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~--------~~---~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
+.+++++++......+.+| ++ +.+..+......+++.+. ..+..+...++-+++++.|.+.+.+.+
T Consensus 211 Ivr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk---~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 211 IVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK---SQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998887654111111 11 233334444556677774 345678889999999999999999886
Q ss_pred Ce---eeCCCCCC-eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 390 FE---VLGDNDSP-VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 390 ~~---v~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
|- +....+|. -+++.+.+......|...+.++|+..-- +.-. .+.+|+++-.++..++++.+++-++.+.+
T Consensus 288 fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lk-Ghr~----vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 288 FYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLK-GHRS----VGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred ccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceec-cccC----CCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 53 22233333 4566666666677899999999877662 2221 13499999889999999999999988876
Q ss_pred Hh
Q 046230 466 LV 467 (489)
Q Consensus 466 ~~ 467 (489)
+.
T Consensus 363 ~~ 364 (365)
T COG1932 363 TY 364 (365)
T ss_pred hh
Confidence 53
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.45 E-value=2.8e-05 Score=73.10 Aligned_cols=272 Identities=14% Similarity=0.101 Sum_probs=151.1
Q ss_pred eCccHHHHHH---hHhhhcCCCCEEEEcCCCchHHHHHHHhcC-CeEEEecCC-------CHHHHHHHHHHHHhcCCCCC
Q 046230 167 FGMGYVTNSA---ILPVLMRKGSLIISDSLNHNSIVNGARGSG-ATIRVFQHN-------TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 167 ~~sG~~a~~~---~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g-~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~ 235 (489)
.-||+.|+.. .+..... ..+|.+..|++.....-+.-.| ..+..++.= |++.+-..|+.+
T Consensus 105 slsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-------- 175 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA-------- 175 (410)
T ss_pred eccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC--------
Confidence 4678888722 2333334 5569999999988877777777 334334322 555555555443
Q ss_pred CCCCccEEEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccC--CCC--ccccccCCCCCCccEEEcc
Q 046230 236 HRPWKKIMVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGK--TGR--GVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~--~G~--~~~~~~~v~p~~~Di~~~t 308 (489)
|...++++-...++++|.- +-+.+|.+.-++.+.+.++|-+|- +|.. ..+ ++..+ .++...--+++-|
T Consensus 176 --Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQ--GfASGD~~~DawAiR~-fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 176 --PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQ--GFASGDLDADAWAIRY-FVEQGFELFVCQS 250 (410)
T ss_pred --CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhc--ccccCCccccHHHHHH-HHhcCCeEEEEhh
Confidence 3344444445568888854 337899999999999999999988 5532 111 12212 1221111478899
Q ss_pred cccccCCcc------eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCc-------hHHHHHHHHH
Q 046230 309 FTKSFGSCG------GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSS-------RGAQKLARIR 375 (489)
Q Consensus 309 ~sK~~g~~G------G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~-------~~~~~~~~~~ 375 (489)
|+|-||..+ -+++-++..+..+.....-.+-++-.||++..|-+.+ +++. .+. .....-.|+.
T Consensus 251 FaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~-kvL~---tP~lre~W~~sik~MssRI~ 326 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVH-KVLS---TPELREQWIQSIKTMSSRIK 326 (410)
T ss_pred hhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHH-HHhc---CHHHHHHHHHHHHHHHHHHH
Confidence 999999776 3445556655544322111111122334333322211 2221 111 1223344556
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 376 ENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 376 ~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
+++..|++.|..++-+-.-+.-...++++.+...... -.+.|.++ .|++.+. =|++++ .++...+|
T Consensus 327 ~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~-qV~~li~~h~vyLl~~-----------GRInis-GLN~~Nve 393 (410)
T KOG1412|consen 327 KMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPA-QVDHLIENHKVYLLSD-----------GRINIS-GLNMKNVE 393 (410)
T ss_pred HHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHH-HHHHHHHhceEEEecC-----------CcEeee-ccccccHH
Confidence 6666777777776432100000111234444444433 45566665 8888731 256664 46678899
Q ss_pred HHHHHHHHHHHHhCC
Q 046230 455 KALEVISRVGDLVGI 469 (489)
Q Consensus 455 ~~l~~l~~~~~~~~~ 469 (489)
.+..+|+++++.+..
T Consensus 394 yVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 394 YVAKAIDETVRAIKS 408 (410)
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999887653
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.31 E-value=4.3e-05 Score=73.51 Aligned_cols=283 Identities=16% Similarity=0.146 Sum_probs=145.7
Q ss_pred chhHHHHHHHHHHHh---CC----CCEEEeCccHHHH-HHhHhhhcC------CCCEEEEcCCCchHHHHHHHhcCCeEE
Q 046230 145 LMVHNELEECVARFV---GK----PAAIVFGMGYVTN-SAILPVLMR------KGSLIISDSLNHNSIVNGARGSGATIR 210 (489)
Q Consensus 145 ~~~~~~l~~~la~~~---g~----~~~i~~~sG~~a~-~~~~~al~~------~g~~Vl~~~~~h~~~~~~~~~~g~~~~ 210 (489)
.-+..+|++.|.++. |. +.-|+|++|+... .+++-+|.. +...|+...|+|+++............
T Consensus 42 ~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y 121 (363)
T PF04864_consen 42 WFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLY 121 (363)
T ss_dssp TTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTE
T ss_pred eeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCc
Confidence 344567777777664 42 5789999999987 677766642 334799999999998776543321111
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
.+.- |...+. ... ....-+=+|-...||+|.+- +.+ .+.-+..+|.|=||-.-.+- .
T Consensus 122 ~w~G-da~~~~---~~~----------~~~~~IElVTSPNNPDG~lr--~~V---~~g~~~k~I~D~AYYWPhyT----p 178 (363)
T PF04864_consen 122 KWAG-DASNFK---NSD----------NPSPYIELVTSPNNPDGQLR--EAV---LNGSSGKVIHDLAYYWPHYT----P 178 (363)
T ss_dssp EEEE-ECCCGT---T-S-----------CCGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-STTTS-----
T ss_pred cccc-cHHhhc---cCC----------CCCCeEEEEeCCCCCccccc--chh---cCCCCcceeeeeeeeccccc----c
Confidence 1110 111111 000 01222334455677777652 111 24456678999998633221 1
Q ss_pred cccccCCCCCCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCC--
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS-- 364 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~-- 364 (489)
+. .|.+-||++.|+||.=|=+| ||.+.+ +++.+.+...-.-.+.+ .+-=.+.-++..|+.+......
T Consensus 179 I~-----~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiG--vS~dsQLRa~kiLk~v~~~~~~~~ 251 (363)
T PF04864_consen 179 IT-----APADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIG--VSRDSQLRALKILKVVLDGYGTEK 251 (363)
T ss_dssp -------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS----HHHHHHHHHHHHHHHHHCCHHT
T ss_pred cC-----CCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhccc--CcHHHHHHHHHHHHHHHhcccCCC
Confidence 11 13455999999999998778 887654 56666655433222222 4444555555555555322111
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHHhCC-CeeeC-------------CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe
Q 046230 365 ---SRGAQKLARIRENSNFFRSELQKMG-FEVLG-------------DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT 427 (489)
Q Consensus 365 ---~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 427 (489)
+..+=-.+.++++=+.|++.+.+-+ |.+.. .+...+.|+.+..+. ..+....|++.||..+.
T Consensus 252 ~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee-d~DC~~~l~~~~I~tr~ 330 (363)
T PF04864_consen 252 GTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE-DEDCYAVLREAKIITRS 330 (363)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-GSSHHHHHHCTTEEEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-cccHHHHHHhCCcccCC
Confidence 1112233444555556666665542 22211 112335666665443 23455667788999986
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
.... ..+..++|+++ ..++++.|.++++|..
T Consensus 331 G~~f--ga~~ryVRlSm--l~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 331 GVLF--GADSRYVRLSM--LKRDDDFDQLLERLSK 361 (363)
T ss_dssp GGGG--TS-TTEEEEES--SS-HHHHHHHHHHHHC
T ss_pred CCcc--CCCCCeEEEec--cCCHHHHHHHHHHHHh
Confidence 3221 23568999988 8999999999999875
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.20 E-value=1.8e-05 Score=75.48 Aligned_cols=289 Identities=13% Similarity=0.140 Sum_probs=165.6
Q ss_pred HHHHHHHHHH-hCC------CCEEEe---CccHHHH--HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC
Q 046230 149 NELEECVARF-VGK------PAAIVF---GMGYVTN--SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT 216 (489)
Q Consensus 149 ~~l~~~la~~-~g~------~~~i~~---~sG~~a~--~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d 216 (489)
.|+.+.-+++ +|. ++.+++ -||+.+. -+.+.+..-++..|..+.|+++.........|..+..+++-|
T Consensus 98 ~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd 177 (427)
T KOG1411|consen 98 AEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYD 177 (427)
T ss_pred HHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecc
Confidence 6777777776 343 233332 4666665 444444455688999999999988777888888887776543
Q ss_pred HH----HHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 217 PS----HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 217 ~~----~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
++ +++..+.+... .|..-++++=...++++|.- ..+++|.++-++.+.+-++|-+|- +|.- |.
T Consensus 178 ~~t~gld~~g~ledl~~-------~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQ--GfaS-G~ 247 (427)
T KOG1411|consen 178 PKTRGLDFKGMLEDLGE-------APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQ--GFAS-GD 247 (427)
T ss_pred ccccccchHHHHHHHhc-------CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhc--cccc-CC
Confidence 32 23333333211 13445555556677888744 448899999999999999999988 5522 21
Q ss_pred cccc-----ccCCCCCCccEEEcccccccCCcc---eE---EEeCHHHHHHHH----hhCCCcccccCCCHHHHHHHHHH
Q 046230 290 GVCE-----LLEVDTADVDIMMGTFTKSFGSCG---GY---IAGSKELIQYLK----YTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 290 ~~~~-----~~~v~p~~~Di~~~t~sK~~g~~G---G~---i~~~~~~~~~l~----~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
...+ +|--+-.+ -++.-||+|-+|..| |. ++.+.+....+. ..-.+. |+ .+|+--|.+.+.
T Consensus 248 ~d~DA~avR~F~~~g~~-~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpm-YS--nPP~hGArIv~~ 323 (427)
T KOG1411|consen 248 LDKDAQAVRLFVEDGHE-ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPM-YS--NPPLHGARIVAT 323 (427)
T ss_pred chhhHHHHHHHHHcCCc-eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhccc-cc--CCCccchhhhhh
Confidence 1111 11111112 366789999999888 44 455555444332 222332 44 555555544443
Q ss_pred H----HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC
Q 046230 355 I----KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF 430 (489)
Q Consensus 355 L----~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 430 (489)
+ +... ....+.+...+++..++..+.+.|++.|-...-..-...++++++......++-..-.+..|+++
T Consensus 324 Il~d~~l~~--~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT---- 397 (427)
T KOG1411|consen 324 ILSDPDLKN--QWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLT---- 397 (427)
T ss_pred ccCChHHHH--HHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeec----
Confidence 2 1000 00113344566777777777777777643320000011234455555554544444444588877
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+--||+++ ..+...++.+.++|.++.+
T Consensus 398 -------~dGRiS~a-G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 398 -------KDGRISMA-GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -------cCceEeec-cccccCCcccchhhHhHhc
Confidence 22577775 5666778888888877654
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.18 E-value=0.00024 Score=73.07 Aligned_cols=276 Identities=13% Similarity=0.188 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCchHHHHHHHhc--CCeEEEecCCCHHHHHH
Q 046230 148 HNELEECVARFVGKP--AAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHNSIVNGARGS--GATIRVFQHNTPSHLEE 222 (489)
Q Consensus 148 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~~~~~~~~~~--g~~~~~~~~~d~~~Le~ 222 (489)
.......++++.|.+ .+-+..-|+.|..++..+. ..+++.++++.-.|+.+...++.- +-.+. +...|+++...
T Consensus 165 llNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~~~~~~~~~ 243 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVVSDIKEADY 243 (1001)
T ss_pred HhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccccccee-EEecCHHHhhc
Confidence 344556677777765 5566677888885554443 456667999999999887765432 22222 11223332221
Q ss_pred HHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE-EcccccccccCCCCccccccCCCCCC
Q 046230 223 VLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL-DEAHSIGAVGKTGRGVCELLEVDTAD 301 (489)
Q Consensus 223 ~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~-DEa~s~g~~g~~G~~~~~~~~v~p~~ 301 (489)
. .+....+++.-. ..+|.+.+..++++++++.|.++++ -+--++-.+.+.| .||.
T Consensus 244 ---s-----------~~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPg-----efGa---- 299 (1001)
T KOG2040|consen 244 ---S-----------SKDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPG-----EFGA---- 299 (1001)
T ss_pred ---c-----------ccceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChh-----hcCc----
Confidence 1 134555665433 3478999999999999999987654 2333322444444 3333
Q ss_pred ccEEEccccc---ccCCcc---eEEEeCHHHHHHH---------------------HhhCCCcccccCCCHHH-HHHHHH
Q 046230 302 VDIMMGTFTK---SFGSCG---GYIAGSKELIQYL---------------------KYTCPAHLYATSISPPA-AEQIIS 353 (489)
Q Consensus 302 ~Di~~~t~sK---~~g~~G---G~i~~~~~~~~~l---------------------~~~~~~~~~~~~~~p~~-~aa~~a 353 (489)
||.+||--. -+|-.| |+.+.++++...+ +.......-.-..+..+ ++|.++
T Consensus 300 -DIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLA 378 (1001)
T KOG2040|consen 300 -DIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLA 378 (1001)
T ss_pred -eeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHH
Confidence 888877332 233212 4444443332211 10000000000011222 222333
Q ss_pred HH----HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec
Q 046230 354 AI----KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 354 ~L----~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
.+ .+. .++...++...++.....+|..+|+..|.++.... .+=.+.+.......++..+..+++|-++-
T Consensus 379 NmaAmyaiY---HGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k~--fFDTLkI~~~~s~~~~l~rA~~~~iNlr~-- 451 (1001)
T KOG2040|consen 379 NMAAMYAIY---HGPHGLKEIARRVHNLTLILAEGLKNAGHELQHKP--FFDTLKIRCGCSAEEVLDRAAKRQINLRL-- 451 (1001)
T ss_pred HHHHHHhhh---cCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcccc--ccceEEEEecCcHHHHHHHHHhhcCceEE--
Confidence 22 233 34556677778888888899999998887765432 22223333333677888888888887773
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
...+.+-+++--..+++|+|.++..+.
T Consensus 452 -----~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 -----VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -----eecCceEEeecccccHHHHHHHHHHHc
Confidence 234668888888999999999999885
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.95 E-value=0.043 Score=50.94 Aligned_cols=298 Identities=17% Similarity=0.196 Sum_probs=148.5
Q ss_pred HHHHHHHHHHhCC---CCEEEeCccHHHH-HHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------
Q 046230 149 NELEECVARFVGK---PAAIVFGMGYVTN-SAILPVL---MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------ 215 (489)
Q Consensus 149 ~~l~~~la~~~g~---~~~i~~~sG~~a~-~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------ 215 (489)
.++......+.|. ..++++...+... ...+..+ ..+-+.|+...-.--+-...+-..|-+++.+..-
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l 139 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDEL 139 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHH
Confidence 3455555555554 4677765443332 2222223 2344566666666556566666667665554321
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC--CCCCChHHHHHHHHHcCcEEEEEcccccccccCC-CCc
Q 046230 216 --TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME--GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKT-GRG 290 (489)
Q Consensus 216 --d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~--G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~-G~~ 290 (489)
|++.+++++++. +...++.+ ....|.- -....+++|..+|..|++.-|+..+|+.- ... =+-
T Consensus 140 ~tdleav~~~iee~----------g~dcilci-~sttscfapr~pd~leaiaaica~~diphivnnayglq--see~i~~ 206 (432)
T KOG3843|consen 140 ITDLEAVEAIIEEL----------GEDCILCI-HSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQ--SEECIHK 206 (432)
T ss_pred HHhHHHHHHHHHHh----------CCceEEEE-eecccccCCCCCchHHHHHHHHHccCchhhhccccccc--hHHHHHH
Confidence 778888888763 12323332 2221211 12345999999999999999999998721 100 000
Q ss_pred cccccCCCCCCccEEEcccccccC-CcceEEEe--CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchH
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFG-SCGGYIAG--SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRG 367 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g-~~GG~i~~--~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~ 367 (489)
+. .+..-..+|..+-|+-|.|- +.||+++. ++..++.+...-.+- .+.+|. .-..+.-|. + ++...
T Consensus 207 ia--a~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgr---asa~ps-~dllitll~-~----gqn~f 275 (432)
T KOG3843|consen 207 IA--AAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGR---ASASPS-LDLLITLLS-L----GQNAF 275 (432)
T ss_pred HH--HHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCCc---cccCcc-HHHHHHHHH-h----chhHH
Confidence 11 11122455777889999994 44666643 456666665433221 112221 111122111 1 22233
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCe---EEEEeCCCCcH---HHHHHHHhhCCce---EEeecCCCc-
Q 046230 368 AQKLARIRENSNFFRSELQKM----GFEVLGDNDSPV---MPIMLYNPAKI---PAFSRECLRQNVA---VVTVAFPAT- 433 (489)
Q Consensus 368 ~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~---~~~~~~~~~~~---~~~~~~l~~~Gi~---v~~~~~p~~- 433 (489)
.+...+-.++--++++.+.+. |--++..+..++ +.+..-++.+. ..|...|..+||. +++.+-..+
T Consensus 276 ~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~ktt 355 (432)
T KOG3843|consen 276 KELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTT 355 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeecccccee
Confidence 333333344444444444332 222222222221 12222222222 2456677776554 444222111
Q ss_pred --------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 434 --------------PLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 434 --------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
.....++-.+.+...+..|+|.++.+|+..++.+..+
T Consensus 356 ieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 356 IEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred eeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence 1112345555555788999999999999887766543
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.79 E-value=0.3 Score=46.14 Aligned_cols=323 Identities=15% Similarity=0.183 Sum_probs=176.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhC-CCC----CCcccCCCcchhHHHHHHHHHHHhCCCC--EEEe--Cc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYS-PST----CSSRVDGGTLMVHNELEECVARFVGKPA--AIVF--GM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~--~s 169 (489)
-++++||+ .|-+.-+..|...+++-+-+|. .+. .+.|.- -...+..+.+..+.+++..++ .++| .+
T Consensus 5 ~~~vvnFa----aGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk-~f~kii~~tes~lreLlniPdn~~vlf~QGG 79 (370)
T KOG2790|consen 5 PERVVNFA----AGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSK-DFAKIINDTESLLRELLNIPDNYKVLFLQGG 79 (370)
T ss_pred ccceeecC----CCcccCCHHHHHHHHHHhhccCCCcceEEEecccch-hHHHHHHHHHHHHHHHHcCCCceeEEEEeCC
Confidence 36789997 6666555566666666665542 211 222322 124556677788888888763 3444 44
Q ss_pred cHHHHHHhHhhhc--CC---CCEEEEcCCCchHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHHHHhcCCCCCC
Q 046230 170 GYVTNSAILPVLM--RK---GSLIISDSLNHNSIVNGARGSGATIRVFQH--------NTPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 170 G~~a~~~~~~al~--~~---g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~Le~~l~~~~~~g~~~~~ 236 (489)
|+..-.++..-+. +. -|.|++....--+...+-+......+..+. .|.+.++.-
T Consensus 80 Gt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~------------- 146 (370)
T KOG2790|consen 80 GTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN------------- 146 (370)
T ss_pred CcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccC-------------
Confidence 5544332222222 22 355665554444444444443332332221 244444321
Q ss_pred CCCccEEEEE--cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC
Q 046230 237 RPWKKIMVIV--EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG 314 (489)
Q Consensus 237 ~~~~~~~viv--e~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g 314 (489)
|+..-+..+ |+|++-+ ..+++ +-.-.|.++++|=..- .+.| .+++ ...++++..--|.+|
T Consensus 147 -~da~yvyyCaNETVHGVE--f~~~P----~~~~~~~vlVaDmSSn--flSr-------pvDv--sk~gvi~aGAQKN~G 208 (370)
T KOG2790|consen 147 -PDASYVYYCANETVHGVE--FDFIP----VNDPKGAVLVADMSSN--FLSR-------PVDV--SKFGVIFAGAQKNVG 208 (370)
T ss_pred -CCccEEEEecCceeecee--cCCCC----CCCCCCceEEEecccc--hhcC-------Cccc--hhcceEEeccccccC
Confidence 233333443 4555432 12232 2234678888887655 2222 3344 334678888999999
Q ss_pred Ccc-eEEEeCHHHHHHHHhhCC-----------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHH
Q 046230 315 SCG-GYIAGSKELIQYLKYTCP-----------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 315 ~~G-G~i~~~~~~~~~l~~~~~-----------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
+.| -.++.+++++........ ...|. +.+-....+.--.++.|.. .+......+...+++..+.
T Consensus 209 ~aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyN-TpP~f~iy~~~Lv~~~il~---~GGl~a~e~~n~~KskllY 284 (370)
T KOG2790|consen 209 PAGVTVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYN-TPPCFGIYVMGLVFEWILE---KGGLAAMEKLNQEKSKLLY 284 (370)
T ss_pred ccccEEEEEehhhhcccccCCccccceeeecccccccc-CCCeeeeeehhhHHHHHHh---cccHHHHHHHHHHHHHHHH
Confidence 988 445556666543322111 11111 2333344445556666642 2345556666688899999
Q ss_pred HHHHhC-CCeeeC---CCCC-CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHH
Q 046230 383 SELQKM-GFEVLG---DNDS-PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKAL 457 (489)
Q Consensus 383 ~~L~~~-g~~v~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l 457 (489)
+.+.+. ||-..+ ..++ .-+++.+.......+|.....+++..-. -++-. -+.+|-++--++|-++.+.++
T Consensus 285 d~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L-KGhRS----VGGiRASlYNAisv~~~q~L~ 359 (370)
T KOG2790|consen 285 DAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL-KGHRS----VGGIRASLYNAISVEEVQKLA 359 (370)
T ss_pred HHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhcc-ccccc----cccchhhhhccccHHHHHHHH
Confidence 999887 664322 2222 2356667766666778777777765433 12211 245898887789999999999
Q ss_pred HHHHHHHHH
Q 046230 458 EVISRVGDL 466 (489)
Q Consensus 458 ~~l~~~~~~ 466 (489)
+-++++.+.
T Consensus 360 ~~m~~F~k~ 368 (370)
T KOG2790|consen 360 AFMKEFQKK 368 (370)
T ss_pred HHHHHHHHh
Confidence 988887653
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.82 E-value=0.031 Score=48.76 Aligned_cols=48 Identities=17% Similarity=0.307 Sum_probs=37.4
Q ss_pred HHHHHHHHHHh----C--C---CCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCch
Q 046230 149 NELEECVARFV----G--K---PAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHN 196 (489)
Q Consensus 149 ~~l~~~la~~~----g--~---~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~ 196 (489)
.+|++.+|+|+ | . ++.|++++|++.. ..++.+++++||.|+++.|+|+
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 56666666665 3 1 3568888887665 8889999999999999999986
No 396
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=89.08 E-value=6.5 Score=39.15 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-c--C--CCCCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-I--Y--SMEGELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v--~--s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
+++++..+++...+.| +.-++++|. + + +..-...+|..|..+.+.++..+|+|-.|+.|
T Consensus 220 t~ee~~~A~e~i~~~G--------n~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G 283 (352)
T PRK13396 220 TIDEWLMAAEYILAAG--------NPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTG 283 (352)
T ss_pred CHHHHHHHHHHHHHcC--------CCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCC
Confidence 5666666666554444 233555554 1 1 11123567999999988889999999999954
No 397
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=88.64 E-value=9.8 Score=35.96 Aligned_cols=134 Identities=18% Similarity=0.149 Sum_probs=81.3
Q ss_pred cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEE
Q 046230 109 NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLI 188 (489)
Q Consensus 109 ~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~V 188 (489)
.|.|++. +-.+.+.+.-+++|....+.-. ..+-.+.+++ .-+.+-+.++...|.-++.++.+.+..|
T Consensus 59 sf~G~G~---~gl~~L~~~~~~~Gl~~~Tev~-------d~~~v~~~~e---~vdilqIgs~~~~n~~LL~~va~tgkPV 125 (250)
T PRK13397 59 SFQGLGL---QGIRYLHEVCQEFGLLSVSEIM-------SERQLEEAYD---YLDVIQVGARNMQNFEFLKTLSHIDKPI 125 (250)
T ss_pred ccCCCCH---HHHHHHHHHHHHcCCCEEEeeC-------CHHHHHHHHh---cCCEEEECcccccCHHHHHHHHccCCeE
Confidence 4555552 3456666666666655422211 1222333344 2456677888887877888877777777
Q ss_pred EEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCCCCC---CCChHHHHH
Q 046230 189 ISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSMEGE---LCKFPEIIA 264 (489)
Q Consensus 189 l~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~~G~---~~~l~~i~~ 264 (489)
++..+... ++++++.+++.....| ..-+++++ ++.+-.-. ..++..|..
T Consensus 126 ilk~G~~~-------------------t~~e~~~A~e~i~~~G--------n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~ 178 (250)
T PRK13397 126 LFKRGLMA-------------------TIEEYLGALSYLQDTG--------KSNIILCERGVRGYDVETRNMLDIMAVPI 178 (250)
T ss_pred EEeCCCCC-------------------CHHHHHHHHHHHHHcC--------CCeEEEEccccCCCCCccccccCHHHHHH
Confidence 77665433 4455555555444443 33366677 54332212 466889999
Q ss_pred HHHHcCcEEEEEcccccc
Q 046230 265 ICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g 282 (489)
+.++++..+|+|-.|+.|
T Consensus 179 lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 179 IQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred HHHHhCCCeEECCCCCCc
Confidence 999899999999999844
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=85.64 E-value=14 Score=37.12 Aligned_cols=59 Identities=15% Similarity=0.237 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCC--CC-CCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSM--EG-ELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~--~G-~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
++++++.+++.....| ..-+++++ ++.+. .| ...+|..|..+.+++++.+++|--|+.|
T Consensus 237 t~~e~~~Ave~i~~~G--------n~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 237 TIEEFIYAAEYIMSQG--------NGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CHHHHHHHHHHHHHCC--------CCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 6777777776655544 22356676 44331 11 2257999999999999999999999843
No 399
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=82.54 E-value=23 Score=33.84 Aligned_cols=93 Identities=15% Similarity=0.192 Sum_probs=58.2
Q ss_pred CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 163 AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 163 ~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.+-+.++...|.-++..+.+.|..|++..+.++ ++++++.+++.....| ..-
T Consensus 110 d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~-------------------t~~e~~~Ave~i~~~G--------n~~ 162 (260)
T TIGR01361 110 DILQIGARNMQNFELLKEVGKQGKPVLLKRGMGN-------------------TIEEWLYAAEYILSSG--------NGN 162 (260)
T ss_pred CEEEECcccccCHHHHHHHhcCCCcEEEeCCCCC-------------------CHHHHHHHHHHHHHcC--------CCc
Confidence 4556666666666666666666666666555443 3455555555443343 222
Q ss_pred EEEEcC-cCCC---CCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 243 MVIVEG-IYSM---EGELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 243 ~vive~-v~s~---~G~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
+++++. +.+. .-...+|..|..+.++++..+++|--|+.|
T Consensus 163 i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 163 VILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred EEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 455553 3221 123467999999999999999999999844
No 400
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=66.01 E-value=1.1e+02 Score=29.21 Aligned_cols=93 Identities=16% Similarity=0.188 Sum_probs=53.8
Q ss_pred CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 163 AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 163 ~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.+-+.++...|.-++..+.+.+..|++.++..+++ +++..+.+.....| ...
T Consensus 112 d~~kIga~~~~n~~LL~~~a~~gkPV~lk~G~~~s~-------------------~e~~~A~e~i~~~G-------n~~- 164 (266)
T PRK13398 112 DMLQIGSRNMQNFELLKEVGKTKKPILLKRGMSATL-------------------EEWLYAAEYIMSEG-------NEN- 164 (266)
T ss_pred CEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCH-------------------HHHHHHHHHHHhcC-------CCe-
Confidence 455566666666666666666666666666555443 34444443333333 223
Q ss_pred EEEEcC-cCCCCC---CCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 243 MVIVEG-IYSMEG---ELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 243 ~vive~-v~s~~G---~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
+++++- .-+.++ ...++..+..+.++++..+++|--|+.|
T Consensus 165 i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 165 VVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 344442 211111 1245888888888889999999999854
No 401
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=65.19 E-value=1.1e+02 Score=30.42 Aligned_cols=59 Identities=19% Similarity=0.241 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-c--C-CCCCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-I--Y-SMEGELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v--~-s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
+++++..+.+...+.| +.-+++++- + | +.+-...++..+..+.+..+..+|+|-.|+.|
T Consensus 212 ti~E~l~A~e~i~~~G--------N~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G 274 (335)
T PRK08673 212 TIEEWLMAAEYILAEG--------NPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATG 274 (335)
T ss_pred CHHHHHHHHHHHHHcC--------CCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCc
Confidence 4556665555544444 233555663 3 2 11223356899999999999999999999944
No 402
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=62.71 E-value=67 Score=28.48 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=60.0
Q ss_pred HHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCch-HHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHh
Q 046230 151 LEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHN-SIVNGARGSGATIRVFQHNTPSHLEEVLREQIA 229 (489)
Q Consensus 151 l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~-~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~ 229 (489)
..+.|.+.++.+-.-+-.||+.-..++..+....+++.++...+.. ....-..+.|.++..+..++.++++..+.+...
T Consensus 44 ta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 44 TAELLRKHVSIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKA 123 (176)
T ss_dssp HHHHHHCC-SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHH
Confidence 3445555554444334466666555555554333344444333333 355556677999999999999999999998766
Q ss_pred cCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEc
Q 046230 230 EGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 230 ~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DE 277 (489)
+| . =+++++.. ++++|+++|+.-+.-+
T Consensus 124 ~G---------~-~viVGg~~-----------~~~~A~~~gl~~v~i~ 150 (176)
T PF06506_consen 124 EG---------V-DVIVGGGV-----------VCRLARKLGLPGVLIE 150 (176)
T ss_dssp TT------------EEEESHH-----------HHHHHHHTTSEEEESS
T ss_pred cC---------C-cEEECCHH-----------HHHHHHHcCCcEEEEE
Confidence 54 2 24444322 4688899988665543
No 403
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=53.86 E-value=1.2e+02 Score=29.74 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=55.9
Q ss_pred HHHHHhCCCCEEEeCc-cHHHH-HHhHhhhcCCCCEEEEcCCCc---hHHHHHHHhcCCeEEEecCC--C-HHHHHHHHH
Q 046230 154 CVARFVGKPAAIVFGM-GYVTN-SAILPVLMRKGSLIISDSLNH---NSIVNGARGSGATIRVFQHN--T-PSHLEEVLR 225 (489)
Q Consensus 154 ~la~~~g~~~~i~~~s-G~~a~-~~~~~al~~~g~~Vl~~~~~h---~~~~~~~~~~g~~~~~~~~~--d-~~~Le~~l~ 225 (489)
.||+.+|+.+.|.=|. |-..+ .+++.++.+-.|+|.+..-.- ...+.-+++.|++++++... . -++..++++
T Consensus 96 LLAkrMGK~riIAETGAGQHGVAtAta~A~fgl~C~iYMGa~Dv~RQ~~NVfRM~LlGA~V~pV~sGs~TLKDA~neAlR 175 (396)
T COG0133 96 LLAKRMGKTRIIAETGAGQHGVATATAAALFGLECVIYMGAEDVERQALNVFRMRLLGAEVVPVTSGSGTLKDAINEALR 175 (396)
T ss_pred HHHHHhCCceEEeecCCCcccHHHHHHHHHhCCceEEEecchhhhhcccchhhhhhcCceEEEeccCCchHHHHHHHHHH
Confidence 4677888876665433 33333 555666777778887643221 12345678889999998765 2 356677777
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+....- ...-+++.++.++.
T Consensus 176 dWvtn~--------~~ThY~iGsa~GPH 195 (396)
T COG0133 176 DWVTNV--------EDTHYLIGSAAGPH 195 (396)
T ss_pred HHHhcc--------ccceEEEeeccCCC
Confidence 765442 33456666666544
No 404
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=53.39 E-value=13 Score=40.00 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=49.8
Q ss_pred cCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcceEEEeCHHHH
Q 046230 249 IYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCGGYIAGSKELI 327 (489)
Q Consensus 249 v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~GG~i~~~~~~~ 327 (489)
+.+.-|+...++++++-|+++||-+|+|=|+. .|++.|.+...+-+-. ....|.- ...+..+|. .=+..+++++.
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~--HF~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg~-~i~~~gr~EVR 281 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPN--HFPPDGNYLARFDGTFLYEHEDPR-RGEHTDWGT-AIFNYGRNEVR 281 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCC--cCCCCcchhhhcCCccccccCCcc-cccCCCccc-chhccCcHHHH
Confidence 34455677789999999999999999999999 8988877644222210 0111111 123444443 23334577777
Q ss_pred HHHHh
Q 046230 328 QYLKY 332 (489)
Q Consensus 328 ~~l~~ 332 (489)
+.+-.
T Consensus 282 ~Fll~ 286 (628)
T COG0296 282 NFLLA 286 (628)
T ss_pred HHHHH
Confidence 66543
No 405
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=48.65 E-value=65 Score=27.29 Aligned_cols=54 Identities=17% Similarity=0.221 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh-----HHHHHHHHHc-Cc-EEEEEcccc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF-----PEIIAICKKY-KA-YIYLDEAHS 280 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l-----~~i~~l~~~~-~~-~li~DEa~s 280 (489)
.+.+.|.+++++ +....+|++-+.++.|...+. +-..+|++++ ++ +..+||-+|
T Consensus 38 ~~~~~l~~li~~------------~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 38 KDIEELKKLIEE------------YQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCHHHHHHHHHH------------CCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred hHHHHHHHHHHH------------hCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 378888888887 466678888888888888663 2233445555 76 566999988
No 406
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=47.23 E-value=70 Score=32.60 Aligned_cols=45 Identities=24% Similarity=0.416 Sum_probs=25.7
Q ss_pred CCCccEEEEEcCcCCCCCCCCChHHHH-HHHHHcC-cEEEEEccccccccc
Q 046230 237 RPWKKIMVIVEGIYSMEGELCKFPEII-AICKKYK-AYIYLDEAHSIGAVG 285 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~l~~i~-~l~~~~~-~~li~DEa~s~g~~g 285 (489)
+|..+.++|++---. ...++.+. .|.+++- .|+++||+|++..+|
T Consensus 111 kp~~K~LYITPE~AA----t~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWG 157 (641)
T KOG0352|consen 111 KPTIKMLYITPEGAA----TDGFQKLLNGLANRDVLRYIVVDEAHCVSQWG 157 (641)
T ss_pred CCceeEEEEchhhhh----hhhHHHHHHHHhhhceeeeEEechhhhHhhhc
Confidence 356777777632111 11344444 4444443 489999999966554
No 407
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=46.72 E-value=4.1e+02 Score=28.70 Aligned_cols=113 Identities=19% Similarity=0.253 Sum_probs=57.4
Q ss_pred CCEE-EeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHH---HHHHHhcCCeEEEecCC-CHHHHHHHHHHHHhcCCCCC
Q 046230 162 PAAI-VFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSI---VNGARGSGATIRVFQHN-TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 162 ~~~i-~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~---~~~~~~~g~~~~~~~~~-d~~~Le~~l~~~~~~g~~~~ 235 (489)
.+++ ++.+|. -...--++++..+|-++++...= .-+ +..++..|.....+... +.++-...+... ..|
T Consensus 33 ~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSPLi-SLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l-~~g---- 106 (590)
T COG0514 33 KDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSPLI-SLMKDQVDQLEAAGIRAAYLNSTLSREERQQVLNQL-KSG---- 106 (590)
T ss_pred CcEEEEccCCCCcchHhhhHHHhcCCCEEEECchH-HHHHHHHHHHHHcCceeehhhcccCHHHHHHHHHHH-hcC----
Confidence 4444 345444 44566788888888666654331 111 23445556444443333 445545444432 222
Q ss_pred CCCCccEEEEE-cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 236 HRPWKKIMVIV-EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 236 ~~~~~~~~viv-e~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
.-+.+++. |...++ ..++.|. +-.-.++++||||++..+|.+=|.
T Consensus 107 ---~~klLyisPErl~~~----~f~~~L~---~~~i~l~vIDEAHCiSqWGhdFRP 152 (590)
T COG0514 107 ---QLKLLYISPERLMSP----RFLELLK---RLPISLVAIDEAHCISQWGHDFRP 152 (590)
T ss_pred ---ceeEEEECchhhcCh----HHHHHHH---hCCCceEEechHHHHhhcCCccCH
Confidence 23434432 333321 1122222 334469999999998888765554
No 408
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=44.21 E-value=1.4e+02 Score=27.45 Aligned_cols=91 Identities=15% Similarity=0.132 Sum_probs=51.3
Q ss_pred ccHHHHHHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 169 MGYVTNSAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
+|..+ ..++.+|..++ .+.+..+..-......++..|+.++..+.+|.+.|.++++. -.+++++-
T Consensus 7 tG~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g-------------~d~v~~~~ 72 (233)
T PF05368_consen 7 TGNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKG-------------VDAVFSVT 72 (233)
T ss_dssp TSHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTT-------------CSEEEEES
T ss_pred ccHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcC-------------CceEEeec
Confidence 34433 33444443333 34444444433445556677999998888999999999975 23344443
Q ss_pred CcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 248 GIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 248 ~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
+..+ .......+.+++.|++.|+-.+
T Consensus 73 ~~~~-~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 73 PPSH-PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SCSC-CCHHHHHHHHHHHHHHHT-SEE
T ss_pred Ccch-hhhhhhhhhHHHhhhccccceE
Confidence 3322 2223346789999999887444
No 409
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=43.11 E-value=1.9e+02 Score=28.20 Aligned_cols=121 Identities=14% Similarity=0.136 Sum_probs=64.1
Q ss_pred EEeCccHHHH-HHhHhhhcC--CCC-EEEEcCCCchHHHHHHHhc-C-CeEEEe--cCCCHHHHHHHHHHHHhcCCCCCC
Q 046230 165 IVFGMGYVTN-SAILPVLMR--KGS-LIISDSLNHNSIVNGARGS-G-ATIRVF--QHNTPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 165 i~~~sG~~a~-~~~~~al~~--~g~-~Vl~~~~~h~~~~~~~~~~-g-~~~~~~--~~~d~~~Le~~l~~~~~~g~~~~~ 236 (489)
+++|.|..=+ +..++-+.+ +.. ++..|.++|++....+... + .....+ ...|.+.+.+++++.
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~--------- 73 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY--------- 73 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc---------
Confidence 4556665554 555555443 223 6889999999876654322 2 233333 334788888888763
Q ss_pred CCCccEEEE---Ec-----CcCCCCCCC----CChHHHHHHHHHcCc-----EEEEEcccccccccCCCCccccccCCCC
Q 046230 237 RPWKKIMVI---VE-----GIYSMEGEL----CKFPEIIAICKKYKA-----YIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 237 ~~~~~~~vi---ve-----~v~s~~G~~----~~l~~i~~l~~~~~~-----~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
+.-+|+ .| ++.++.-.+ .---.|.+.+++|.. .+=-||||+ .++.+.....+.-.+.|
T Consensus 74 ---~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG--~l~~~~~~FtE~tp~~P 148 (340)
T COG1088 74 ---QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG--DLGLDDDAFTETTPYNP 148 (340)
T ss_pred ---CCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc--cccCCCCCcccCCCCCC
Confidence 122232 22 122211000 112467788888873 233699998 66655433333333434
No 410
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=42.81 E-value=2.4e+02 Score=26.13 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=58.9
Q ss_pred EEEeCccHHHHHHhHhhhcCCC-------------CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHH
Q 046230 164 AIVFGMGYVTNSAILPVLMRKG-------------SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLR 225 (489)
Q Consensus 164 ~i~~~sG~~a~~~~~~al~~~g-------------~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~ 225 (489)
+.+++.|-..+.++..++...- |-.-...+|+-.....++..|.+++.+... ..++|.++|+
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~ 83 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALR 83 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHH
Confidence 3456777777766666653322 222233333444445556667777776544 4667777777
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
.. +.-.|+.+.+++.. -...+-.+|++.|+-++
T Consensus 84 ~l------------~~d~iv~GaI~s~y----qk~rve~lc~~lGl~~~ 116 (223)
T COG2102 84 RL------------KVDGIVAGAIASEY----QKERVERLCEELGLKVY 116 (223)
T ss_pred hC------------cccEEEEchhhhHH----HHHHHHHHHHHhCCEEe
Confidence 63 34467777777733 57899999999988554
No 411
>PRK07179 hypothetical protein; Provisional
Probab=42.54 E-value=3.8e+02 Score=27.14 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=25.2
Q ss_pred hHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc
Q 046230 51 LEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS 107 (489)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s 107 (489)
.+.++..++... ....+....+++|.++++.+ |+.||||++
T Consensus 29 ~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~---------------~~~YL~l~~ 69 (407)
T PRK07179 29 LDKYIEERVNKN-WNGKHLVLGKTPGPDAIILQ---------------SNDYLNLSG 69 (407)
T ss_pred HHHHHHHhhccC-cCCceEEeecCCCCcEEEee---------------cCCccCCCC
Confidence 444444443322 12233445678999999998 788888764
No 412
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=42.45 E-value=3e+02 Score=26.01 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEE----ecCCC----HHH
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRV----FQHNT----PSH 219 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~----~~~~d----~~~ 219 (489)
.++++..|+++...+.+++.+|+++. .++..+.+.. -.|++....+..... ...+..+.. +..+. -..
T Consensus 79 ~~IA~~Aa~lI~~g~~ifld~GTT~~-~la~~L~~~~~ltviTNsl~ia~~l~--~~~~~~vi~~GG~~~~~~~~~~G~~ 155 (253)
T COG1349 79 RAIAKAAATLIEDGDTIFLDAGTTTL-ALARALPDDNNLTVITNSLNIAAALL--EKPNIEVILLGGTVRKKSGSFVGPL 155 (253)
T ss_pred HHHHHHHHhhCCCCCEEEECCCcHHH-HHHHHhCcCCCeEEEeCCHHHHHHHH--hCCCCeEEEeCcEEEcCCCeEEcHH
Confidence 56777788888878899999998764 3455555444 356655554333322 111222211 11111 112
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH----HH-cCcEEEEEcccccccccCCCCc
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC----KK-YKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~----~~-~~~~li~DEa~s~g~~g~~G~~ 290 (489)
-.+.|+.. .-+++++-+.++....|...+-..-.+++ +. ...++++| |+ -||+.+..
T Consensus 156 a~~~l~~~----------~~d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~s--Kf~~~~~~ 217 (253)
T COG1349 156 AEEFLRQF----------NFDKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SS--KFGRVAPA 217 (253)
T ss_pred HHHHHHhC----------cccEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CC--ccCCceeE
Confidence 23334432 12566666777776666554422222222 22 35789999 66 66666544
No 413
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=41.49 E-value=3.7e+02 Score=27.53 Aligned_cols=59 Identities=20% Similarity=0.149 Sum_probs=39.0
Q ss_pred HHHhCCCCEEE-eCccHHHH-HHhHhhhcCCCCEEEEcCCCch---HHHHHHHhcCCeEEEecC
Q 046230 156 ARFVGKPAAIV-FGMGYVTN-SAILPVLMRKGSLIISDSLNHN---SIVNGARGSGATIRVFQH 214 (489)
Q Consensus 156 a~~~g~~~~i~-~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~---~~~~~~~~~g~~~~~~~~ 214 (489)
|+..|....|+ .++|-.+. .+++.+..+-.+.|+++...-. .....++..|++++.++.
T Consensus 105 A~~~G~~~vI~etgsGnhG~A~A~aaa~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~ 168 (402)
T PRK13028 105 AKRMGKKRLIAETGAGQHGVATATAAALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTR 168 (402)
T ss_pred HHHcCCCeEEEecCcHHHHHHHHHHHHHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcC
Confidence 44456554554 35666665 5555566777888888764333 345578999999999975
No 414
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=39.81 E-value=3.7e+02 Score=27.57 Aligned_cols=57 Identities=16% Similarity=0.350 Sum_probs=37.8
Q ss_pred CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC---C-----CCCCC----hHHHHHHHHHcCcEEE
Q 046230 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM---E-----GELCK----FPEIIAICKKYKAYIY 274 (489)
Q Consensus 207 ~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~---~-----G~~~~----l~~i~~l~~~~~~~li 274 (489)
..+..++..+++++.+.+++ .+..++|+++++++ . |++.- -.+|.++||++|+.++
T Consensus 147 ~~l~l~aEt~~e~I~~~l~~------------~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~f 214 (456)
T COG1066 147 NNLYLLAETNLEDIIAELEQ------------EKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIF 214 (456)
T ss_pred cceEEehhcCHHHHHHHHHh------------cCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEE
Confidence 44555666788888888876 24556777665543 2 43322 3689999999998655
Q ss_pred E
Q 046230 275 L 275 (489)
Q Consensus 275 ~ 275 (489)
.
T Consensus 215 i 215 (456)
T COG1066 215 I 215 (456)
T ss_pred E
Confidence 3
No 415
>TIGR01389 recQ ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ.
Probab=39.80 E-value=4.5e+02 Score=28.33 Aligned_cols=18 Identities=33% Similarity=0.514 Sum_probs=13.7
Q ss_pred CcEEEEEcccccccccCC
Q 046230 270 KAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~ 287 (489)
=-++|+||+|.+..+|..
T Consensus 128 l~~iViDEaH~i~~~g~~ 145 (591)
T TIGR01389 128 IALVAVDEAHCVSQWGHD 145 (591)
T ss_pred CCEEEEeCCcccccccCc
Confidence 358999999997666543
No 416
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.25 E-value=1.3e+02 Score=23.64 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=41.2
Q ss_pred CCchHHHHHHHhcCCeEEEe--cCC-CH--HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHH
Q 046230 193 LNHNSIVNGARGSGATIRVF--QHN-TP--SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICK 267 (489)
Q Consensus 193 ~~h~~~~~~~~~~g~~~~~~--~~~-d~--~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~ 267 (489)
..-..+...+.-.|.....+ +.. .. ..|++.+.+. +.++++++.+.. .-...+.+.|+
T Consensus 10 ~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~a------------D~VIv~t~~vsH-----~~~~~vk~~ak 72 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKA------------DLVIVFTDYVSH-----NAMWKVKKAAK 72 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCC------------CEEEEEeCCcCh-----HHHHHHHHHHH
Confidence 34445666677788888877 211 22 2366666541 344444544432 13789999999
Q ss_pred HcCcEEEEEc
Q 046230 268 KYKAYIYLDE 277 (489)
Q Consensus 268 ~~~~~li~DE 277 (489)
++|+.++.=.
T Consensus 73 k~~ip~~~~~ 82 (97)
T PF10087_consen 73 KYGIPIIYSR 82 (97)
T ss_pred HcCCcEEEEC
Confidence 9999877543
No 417
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=38.73 E-value=91 Score=26.19 Aligned_cols=53 Identities=23% Similarity=0.299 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh-----HHHHHHHHHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF-----PEIIAICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l-----~~i~~l~~~~~~-~li~DEa~s 280 (489)
+.+.|.+++++ +....||++-+.+|.|+..+. +-..+|++++++ +.++||-+|
T Consensus 36 ~~~~l~~~i~~------------~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKE------------WTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHH------------cCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 46677777776 455678888788899988762 223334444565 677999988
No 418
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=38.26 E-value=76 Score=25.23 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=41.6
Q ss_pred EEeCCCCcHHHHHHHHhhCCceEEeecC-CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 403 IMLYNPAKIPAFSRECLRQNVAVVTVAF-PATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
+.+....+...|+..+.+.|..+..... .......-.+.++....++.+.|......|.++.++.+..|
T Consensus 30 ~~f~~~~~~~~f~~~~~~~g~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~I~~~~~~l~~lA~~~~g~Y 99 (104)
T PF06877_consen 30 FYFEDEEDAEKFAEELEKLGYEVESAEEDEEDGDGPYCLDISREMVLDYEDINAITQELEDLAKEFGGEY 99 (104)
T ss_dssp EEES-HHHHHHHHHHHHHHS---B----B-SS-SSBEEEEEEEEE-S-HHHHHHHHHHHHHHHHHHT-EE
T ss_pred EEeCCHHHHHHHHHHHHHCCCEEEEeecccCCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHHHhCcEe
Confidence 4455666788999999999988764222 11111123466666677899999999999999998887554
No 419
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=36.97 E-value=79 Score=28.53 Aligned_cols=41 Identities=27% Similarity=0.408 Sum_probs=25.3
Q ss_pred ccEEEEEcCcCC--CCCCCCChHHHHHHHHHcCcEEEEEcccccccc
Q 046230 240 KKIMVIVEGIYS--MEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV 284 (489)
Q Consensus 240 ~~~~vive~v~s--~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~ 284 (489)
...++++...++ +.+....-++|.++++++|+ +.+.++|++
T Consensus 15 ~~illl~g~e~~~~p~~~~e~a~~vld~a~~~gv----~~iitLgG~ 57 (188)
T TIGR00162 15 TDLIILVGNTQSLSPEGQYELVNAIIDVAKKYGA----RMIYTLGGY 57 (188)
T ss_pred CCEEEEEcCCCCCChhhHHHHHHHHHHHHHHcCC----CEEEEecCC
Confidence 345556655533 34444456899999999998 344455544
No 420
>smart00642 Aamy Alpha-amylase domain.
Probab=36.83 E-value=25 Score=30.99 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=23.7
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
|+...++++++.|+++|+-+|+|=|..
T Consensus 67 Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 67 GTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 455669999999999999999999965
No 421
>TIGR03586 PseI pseudaminic acid synthase.
Probab=35.63 E-value=4.2e+02 Score=26.24 Aligned_cols=89 Identities=18% Similarity=0.258 Sum_probs=53.4
Q ss_pred EEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 164 AIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 164 ~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.+-+.||-..|.-++..+.+.|.-|+...+. .++++++.+++.....| ..-+
T Consensus 113 ~~KI~S~~~~n~~LL~~va~~gkPvilstG~--------------------~t~~Ei~~Av~~i~~~g--------~~~i 164 (327)
T TIGR03586 113 AYKIASFEITDLPLIRYVAKTGKPIIMSTGI--------------------ATLEEIQEAVEACREAG--------CKDL 164 (327)
T ss_pred EEEECCccccCHHHHHHHHhcCCcEEEECCC--------------------CCHHHHHHHHHHHHHCC--------CCcE
Confidence 5666777777766666666666555554432 24566666665543333 2124
Q ss_pred EEEcCc--CCCCCCCCChHHHHHHHHHcCcEE-EEEcccccc
Q 046230 244 VIVEGI--YSMEGELCKFPEIIAICKKYKAYI-YLDEAHSIG 282 (489)
Q Consensus 244 vive~v--~s~~G~~~~l~~i~~l~~~~~~~l-i~DEa~s~g 282 (489)
++.+.+ |...=...+|..|..+.++++..+ +.| |+.|
T Consensus 165 ~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G 204 (327)
T TIGR03586 165 VLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLG 204 (327)
T ss_pred EEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCc
Confidence 443332 221212356999999999999888 777 8744
No 422
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=35.45 E-value=38 Score=28.36 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=19.4
Q ss_pred CccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc
Q 046230 239 WKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa 278 (489)
...++|++.+. .+-++++++|++|++.|+.=..
T Consensus 81 ~~P~iIvt~~~-------~~p~~l~e~a~~~~ipll~t~~ 113 (127)
T PF02603_consen 81 NPPCIIVTRGL-------EPPPELIELAEKYNIPLLRTPL 113 (127)
T ss_dssp T-S-EEEETTT----------HHHHHHHHHCT--EEEESS
T ss_pred CCCEEEEECcC-------CCCHHHHHHHHHhCCcEEEcCC
Confidence 35566666654 3789999999999998775443
No 423
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=35.38 E-value=4.9e+02 Score=26.41 Aligned_cols=129 Identities=16% Similarity=0.184 Sum_probs=72.1
Q ss_pred CCccchHHHHHHHHH----hCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEeCccHHHH--HHhHhhhcCCCCEE
Q 046230 116 SDEYCTPRVIESLKK----YSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVFGMGYVTN--SAILPVLMRKGSLI 188 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~----~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~--~~~~~al~~~g~~V 188 (489)
..|+..+.+.+.+++ +++.........|+. ...++..++.++.. ++++++.+|.=.. .-++..+ +..-.+
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsG--t~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~-g~~v~~ 108 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSG--TLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY-GAEVVV 108 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCc--HHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh-CCceEE
Confidence 356666766666655 343321222222221 16788999999975 5667778886554 2233322 222223
Q ss_pred EEcCCCch----HHHHHHH-hcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC
Q 046230 189 ISDSLNHN----SIVNGAR-GSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255 (489)
Q Consensus 189 l~~~~~h~----~~~~~~~-~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~ 255 (489)
+....... .+...+. -...+.+.+.|+ +++++-++++++ -+++|++.|.|..|.
T Consensus 109 ~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~-------------g~l~iVDaVsS~Gg~ 175 (383)
T COG0075 109 LEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH-------------GALLIVDAVSSLGGE 175 (383)
T ss_pred EeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc-------------CCEEEEEecccCCCc
Confidence 32222221 1333333 224556666665 778888888762 468889999998887
Q ss_pred CCChH
Q 046230 256 LCKFP 260 (489)
Q Consensus 256 ~~~l~ 260 (489)
..+..
T Consensus 176 ~~~vd 180 (383)
T COG0075 176 PLKVD 180 (383)
T ss_pred ccchh
Confidence 65554
No 424
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=35.23 E-value=5.1e+02 Score=27.14 Aligned_cols=54 Identities=20% Similarity=0.319 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC-cEEEEE
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK-AYIYLD 276 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~-~~li~D 276 (489)
|.--+++.|++....| ++..++|..--.+..|....+-+|.++|+++. +||..-
T Consensus 275 Dhh~feKiideDlaag-------kkPLilia~iGasi~GqnDmi~kildi~eahakfWLHas 329 (838)
T KOG0630|consen 275 DHHLFEKIIDEDLAAG-------KKPLILIADIGASICGQNDMILKILDICEAHAKFWLHAS 329 (838)
T ss_pred cHHHHHHHHHHHHhCC-------CCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeec
Confidence 5667899998887765 33444443333455788888999999999997 777653
No 425
>PRK05638 threonine synthase; Validated
Probab=34.69 E-value=2.7e+02 Score=28.80 Aligned_cols=60 Identities=13% Similarity=0.074 Sum_probs=42.9
Q ss_pred CCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHH
Q 046230 160 GKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 160 g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~L 220 (489)
+....+..++|-.+. .++..+..+-...|+++...-..-...++..|++++.++- +.++.
T Consensus 111 g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~-~~~~~ 171 (442)
T PRK05638 111 AANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGE-SVDEA 171 (442)
T ss_pred CCCEEEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECC-CHHHH
Confidence 444555568887777 5555566677788888887666677788999999998864 34433
No 426
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=34.08 E-value=70 Score=25.25 Aligned_cols=88 Identities=17% Similarity=0.256 Sum_probs=54.1
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
...++...+.|+.|+ .+-++...++...++.+.+..|-+.++++.|+....-. +. ||+.-.|
T Consensus 8 ~~~L~~avkTGkvil----G~k~tiK~lk~gkaKliiiAsN~P~~~k~~ieyYAkLs--------~i------pV~~y~G 69 (100)
T COG1911 8 EKELKLAVKTGKVIL----GSKRTIKSLKLGKAKLIIIASNCPKELKEDIEYYAKLS--------DI------PVYVYEG 69 (100)
T ss_pred HHHHHHHHhcCCEEE----ehHHHHHHHHcCCCcEEEEecCCCHHHHHHHHHHHHHc--------CC------cEEEecC
Confidence 344555567788877 34567778888888988899998888888887642110 11 2222223
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 255 ELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
+-.+|-.++.--..-+++.|.|+-.|
T Consensus 70 t~~eLG~~cgkpf~v~~laIiD~G~S 95 (100)
T COG1911 70 TSVELGTVCGKPFRVAALAIIDEGDS 95 (100)
T ss_pred CceeHHhhhCCCceEEEEEEecCchh
Confidence 33344444433344578888888655
No 427
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=33.39 E-value=2.8e+02 Score=26.23 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=52.7
Q ss_pred EEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 164 AIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 164 ~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.|++-.||...-.++..+...+.++++-...|+.-...-...+..++.=+..|.++|++.|+++ .. -
T Consensus 2 ~ILvlgGTtE~r~la~~L~~~g~v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~------------~i-~ 68 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLAEAGYVIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLREN------------GI-D 68 (249)
T ss_pred EEEEEechHHHHHHHHHHHhcCCEEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhC------------CC-c
Confidence 3556678887777777777777644444444443332222123333333344888888888762 23 3
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
.|++..+.-. ..==+.+.+.|++.|+.++
T Consensus 69 ~vIDATHPfA--~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 69 AVIDATHPFA--AEISQNAIEACRELGIPYL 97 (249)
T ss_pred EEEECCCchH--HHHHHHHHHHHhhcCcceE
Confidence 4445433100 0002567788888887655
No 428
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=32.89 E-value=1.2e+02 Score=25.68 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh-----HHHHHHHHHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF-----PEIIAICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l-----~~i~~l~~~~~~-~li~DEa~s 280 (489)
+.+.|.+.+++ +....||++-+.++.|...+. +-+.+|.+++++ +.++||-+|
T Consensus 42 ~~~~l~~~i~~------------~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 42 DWDRLEKLIKE------------WQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred HHHHHHHHHHH------------hCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 36677777776 455678888777888888662 222233334454 677999988
No 429
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=32.62 E-value=29 Score=33.75 Aligned_cols=28 Identities=18% Similarity=0.535 Sum_probs=23.0
Q ss_pred CChHHHHHHHH-HcCcEEEEEcccccccc
Q 046230 257 CKFPEIIAICK-KYKAYIYLDEAHSIGAV 284 (489)
Q Consensus 257 ~~l~~i~~l~~-~~~~~li~DEa~s~g~~ 284 (489)
..|++|+++|. .++.+||+||+|....+
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~akn~ 187 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAKNL 187 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcCCC
Confidence 45999999995 47889999999985554
No 430
>PLN03244 alpha-amylase; Provisional
Probab=32.44 E-value=46 Score=36.84 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=28.0
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCC
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTG 288 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G 288 (489)
|+...|+++++.|++.|+-||+|=|++ .+++.+
T Consensus 438 GTPeDLK~LVD~aH~~GI~VILDvV~N--H~~~d~ 470 (872)
T PLN03244 438 GTPDDFKRLVDEAHGLGLLVFLDIVHS--YAAADE 470 (872)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecCc--cCCCcc
Confidence 444569999999999999999999998 666655
No 431
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=32.40 E-value=1e+02 Score=27.98 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=28.6
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
..+.||+|-+ +..|.+...+++.++|+|||+.+|
T Consensus 156 ~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 156 KPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred CCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEE
Confidence 4577888755 458999999999999999998776
No 432
>PRK04346 tryptophan synthase subunit beta; Validated
Probab=32.12 E-value=5.7e+02 Score=26.12 Aligned_cols=71 Identities=23% Similarity=0.204 Sum_probs=44.4
Q ss_pred HHHhCCCCEEE-eCccHHHH-HHhHhhhcCCCCEEEEcCCCch---HHHHHHHhcCCeEEEecCC--CHH-HHHHHHHH
Q 046230 156 ARFVGKPAAIV-FGMGYVTN-SAILPVLMRKGSLIISDSLNHN---SIVNGARGSGATIRVFQHN--TPS-HLEEVLRE 226 (489)
Q Consensus 156 a~~~g~~~~i~-~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~---~~~~~~~~~g~~~~~~~~~--d~~-~Le~~l~~ 226 (489)
|+..|+...|. .++|-.+. .+...+..+-.++|+++...-. .....++..|++++.++.. +++ +..++++.
T Consensus 101 A~~~Gk~~vIaetgaGnhG~A~A~~aa~~Gl~c~I~mp~~d~~rq~~nv~~m~~lGA~Vv~v~~g~~~l~da~~ea~~~ 179 (397)
T PRK04346 101 AKRMGKKRIIAETGAGQHGVATATAAALLGLECVIYMGAEDVERQALNVFRMKLLGAEVVPVTSGSRTLKDAVNEALRD 179 (397)
T ss_pred HHHcCCCeEEEecCcHHHHHHHHHHHHHcCCcEEEEecCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 45566655555 35666665 5556666777888888764322 2345688999999998752 443 34455544
No 433
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=31.50 E-value=94 Score=27.19 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=43.7
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCC
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G 254 (489)
..++..+..++-.|..-.-+...... ..+.+++.....|.+.+.+++.. -+.++..+.+...
T Consensus 12 ~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~------------~d~vi~~~~~~~~--- 73 (183)
T PF13460_consen 12 RALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKG------------ADAVIHAAGPPPK--- 73 (183)
T ss_dssp HHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTT------------SSEEEECCHSTTT---
T ss_pred HHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhh------------cchhhhhhhhhcc---
Confidence 45555655555444332222333333 55677777777799888888874 1333222322211
Q ss_pred CCCChHHHHHHHHHcCc
Q 046230 255 ELCKFPEIIAICKKYKA 271 (489)
Q Consensus 255 ~~~~l~~i~~l~~~~~~ 271 (489)
.....+.+.+.|++.|+
T Consensus 74 ~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred ccccccccccccccccc
Confidence 23346788888887664
No 434
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=30.71 E-value=6.6e+02 Score=27.49 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=0.0
Q ss_pred CCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS 315 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~ 315 (489)
||-+..-++++.-.+++-|....+++|+++|+++++ |.+ .+
T Consensus 72 HRqKADEaY~iGk~l~PV~AYL~ideii~iak~~~v-------------------------------dav--------HP 112 (1176)
T KOG0369|consen 72 HRQKADEAYLIGKGLPPVGAYLAIDEIISIAKKHNV-------------------------------DAV--------HP 112 (1176)
T ss_pred hhhccccceecccCCCchhhhhhHHHHHHHHHHcCC-------------------------------Cee--------cC
Q ss_pred cc-eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee
Q 046230 316 CG-GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEV 392 (489)
Q Consensus 316 ~G-G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v 392 (489)
| |++.-+.++.+........++.- .-+-+..+++....+-..+ |.++
T Consensus 113 -GYGFLSErsdFA~av~~AGi~fiGP-----------------------------speVi~~mGDKv~AR~~Ai~agVpv 162 (1176)
T KOG0369|consen 113 -GYGFLSERSDFAQAVQDAGIRFIGP-----------------------------SPEVIDSMGDKVAARAIAIEAGVPV 162 (1176)
T ss_pred -CccccccchHHHHHHHhcCceEeCC-----------------------------CHHHHHHhhhHHHHHHHHHHcCCCc
Q ss_pred eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe-ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 393 LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT-VAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++...+|+ ....+..+.+.+.|.-+.. ..|.....+ +|. ..+-||+++..++
T Consensus 163 VPGTpgPi--------tt~~EA~eF~k~yG~PvI~KAAyGGGGRG---mRv----Vr~~e~vee~f~R 215 (1176)
T KOG0369|consen 163 VPGTPGPI--------TTVEEALEFVKEYGLPVIIKAAYGGGGRG---MRV----VRSGEDVEEAFQR 215 (1176)
T ss_pred cCCCCCCc--------ccHHHHHHHHHhcCCcEEEeecccCCCcc---eEE----eechhhHHHHHHH
No 435
>PRK08329 threonine synthase; Validated
Probab=30.67 E-value=4.9e+02 Score=25.87 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=39.9
Q ss_pred CCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC
Q 046230 160 GKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
Q Consensus 160 g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 215 (489)
|....+..++|-.+. .+...+..+-...|+++...-..-...++..|++++.++.+
T Consensus 103 g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~ 159 (347)
T PRK08329 103 GINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEGD 159 (347)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 444555567787776 55555566777888888766556677788899999988754
No 436
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=30.66 E-value=1.1e+02 Score=31.07 Aligned_cols=37 Identities=16% Similarity=0.369 Sum_probs=28.5
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~ 279 (489)
-.++|+.+ |. -|.+.+.+.++++||+.|+.+++|-=-
T Consensus 144 ~~~vVLSD--Y~-KG~L~~~q~~I~~ar~~~~pVLvDPKg 180 (467)
T COG2870 144 FDALVLSD--YA-KGVLTNVQKMIDLAREAGIPVLVDPKG 180 (467)
T ss_pred CCEEEEec--cc-cccchhHHHHHHHHHHcCCcEEECCCC
Confidence 45555554 33 467778999999999999999999653
No 437
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=30.05 E-value=3.5e+02 Score=26.52 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=55.9
Q ss_pred EEEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 164 AIVFGMGYVTN-SAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 164 ~i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
.|+++.|+.=+ +..+..|...| ++|+.|+..-+....-.+.. .+.+.-+..|-+.|++.+.++ +.
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~------------~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEEN------------KI 68 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhc------------CC
Confidence 36667666665 66666665544 67788888777654433322 344455556888899988873 22
Q ss_pred EEEE--------EcCcCCCCCC----CCChHHHHHHHHHcCc
Q 046230 242 IMVI--------VEGIYSMEGE----LCKFPEIIAICKKYKA 271 (489)
Q Consensus 242 ~~vi--------ve~v~s~~G~----~~~l~~i~~l~~~~~~ 271 (489)
-+|+ -|++..|.-. +.---.|.+.|+++|+
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv 110 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGV 110 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCC
Confidence 2333 2444432100 1113478899999986
No 438
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=29.20 E-value=2.7e+02 Score=28.77 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=46.6
Q ss_pred HHHHHhCCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC
Q 046230 154 CVARFVGKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
Q Consensus 154 ~la~~~g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 215 (489)
+..+++.....+..|+|..+. .+...+..+=..+|+++...-..-...++..|++++.++.+
T Consensus 145 ~~~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~ 207 (431)
T TIGR02035 145 KFKDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESD 207 (431)
T ss_pred hhhhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344555555666678898887 55566667778888898887777888899999999888754
No 439
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=29.03 E-value=3.1e+02 Score=28.10 Aligned_cols=56 Identities=11% Similarity=0.075 Sum_probs=43.6
Q ss_pred CCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC
Q 046230 160 GKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
Q Consensus 160 g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 215 (489)
.....+..|+|..+. .+...+..+-..+|+++...-..-...++..|++++.++.+
T Consensus 133 ~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~ 189 (404)
T cd06447 133 SQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETD 189 (404)
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCC
Confidence 334456668898887 56666667778899999888888888999999999988743
No 440
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=28.96 E-value=5.8e+02 Score=25.24 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=59.4
Q ss_pred HHHHHHhCCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeE-EEecCCCHHHHHHHHHHHHhc
Q 046230 153 ECVARFVGKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATI-RVFQHNTPSHLEEVLREQIAE 230 (489)
Q Consensus 153 ~~la~~~g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~-~~~~~~d~~~Le~~l~~~~~~ 230 (489)
.+|-++......++++|=+.-. .-.+..+--+--.|.+.+.++..+..-+...+-++ ......++++++++++-....
T Consensus 93 ~~Lke~a~~~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~E~~~~plik~iA~~~kPiIlSTGma~~~ei~~av~~~r~~ 172 (347)
T COG2089 93 AQLKEYARKRGIIFFSSPFDLTAVDLLESLNPPAYKIASGEINDLPLIKYIAKKGKPIILSTGMATIEEIEEAVAILREN 172 (347)
T ss_pred HHHHHHHHHcCeEEEecCCCHHHHHHHHhcCCCeEEecCccccChHHHHHHHhcCCCEEEEcccccHHHHHHHHHHHHhc
Confidence 3344444444556665544332 33344443344456666667666655544444332 224456778888877766555
Q ss_pred CCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 046230 231 GQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKA 271 (489)
Q Consensus 231 g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~ 271 (489)
|.+ ..+++=+-+.|...=.-.+|+.|.++..++++
T Consensus 173 g~~------~i~LLhC~s~YPap~ed~NL~~i~~l~~~Fn~ 207 (347)
T COG2089 173 GNP------DIALLHCTSAYPAPFEDVNLKAIPKLAEAFNA 207 (347)
T ss_pred CCC------CeEEEEecCCCCCCHHHhhHHHHHHHHHHhCC
Confidence 422 23333333344322123458888888888865
No 441
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=28.43 E-value=56 Score=30.11 Aligned_cols=22 Identities=18% Similarity=0.480 Sum_probs=17.5
Q ss_pred hHHHHHHHHHcCcEEEEEcccc
Q 046230 259 FPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s 280 (489)
.+++.++|++|++.+|+++=.-
T Consensus 54 a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 54 AEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHHHhCCeEEecCcHH
Confidence 5799999999999777766433
No 442
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=27.80 E-value=80 Score=30.44 Aligned_cols=54 Identities=26% Similarity=0.430 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC--cEEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK--AYIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~--~~li~DEa~s 280 (489)
....+++++++.+.+. .+.++|+++-..- +.=+..|.+.|.+.+ +||++|+.+.
T Consensus 131 ~~p~IKE~vR~~I~~A-------~kVIAIVMD~FTD----~dIf~DLleAa~kR~VpVYiLLD~~~~ 186 (284)
T PF07894_consen 131 GQPHIKEVVRRMIQQA-------QKVIAIVMDVFTD----VDIFCDLLEAANKRGVPVYILLDEQNL 186 (284)
T ss_pred CCCCHHHHHHHHHHHh-------cceeEEEeecccc----HHHHHHHHHHHHhcCCcEEEEechhcC
Confidence 4445555555555442 5677888764432 234788999997776 6899999865
No 443
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=27.74 E-value=1.2e+02 Score=24.66 Aligned_cols=45 Identities=24% Similarity=0.163 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
++++|++++.+ ..-.+++++-++ |.+.-.++..+++++.++=+++
T Consensus 50 ~~eEle~~lee-------------~~E~ivvGTG~~--G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 50 ALEELEELLEE-------------GPEVIVVGTGQS--GMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred CHHHHHHHHhc-------------CCcEEEEecCce--eEEEeCHHHHHHHHhcCCeEEE
Confidence 79999999986 222455554333 6677789999999999966554
No 444
>PRK07476 eutB threonine dehydratase; Provisional
Probab=27.22 E-value=6e+02 Score=24.87 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=38.3
Q ss_pred EEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC
Q 046230 164 AIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
Q Consensus 164 ~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 215 (489)
.+..++|..+. .+...+..+-...|+++...-......++..|++++.++.+
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 70 VVTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred EEEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 45557777776 55555556777888888877777778889999999888754
No 445
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=27.13 E-value=5.9e+02 Score=24.99 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=21.4
Q ss_pred CChHHHHHHHHHcCcEEEEEcccc
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
..+.+|.++|+++|+.+++|-...
T Consensus 146 d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 146 DAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred HHHHHHHHHHHhcCCeEEEECChH
Confidence 358999999999999999998765
No 446
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=26.79 E-value=4.2e+02 Score=22.96 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCC-CCEEEEcCCCc
Q 046230 148 HNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRK-GSLIISDSLNH 195 (489)
Q Consensus 148 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~-g~~Vl~~~~~h 195 (489)
-.+++++.++++...+.|++.+|+.... +++.+..+ +-.|++.+..-
T Consensus 6 K~~IA~~A~~~I~~~~~Ifld~GtT~~~-la~~L~~~~~ltVvTnsl~i 53 (161)
T PF00455_consen 6 KRAIARKAASLIEDGDTIFLDSGTTTLE-LAKYLPDKKNLTVVTNSLPI 53 (161)
T ss_pred HHHHHHHHHHhCCCCCEEEEECchHHHH-HHHHhhcCCceEEEECCHHH
Confidence 4567788888888889999999987653 34444444 55666665543
No 447
>TIGR00614 recQ_fam ATP-dependent DNA helicase, RecQ family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=25.98 E-value=7.6e+02 Score=25.65 Aligned_cols=17 Identities=41% Similarity=0.544 Sum_probs=13.3
Q ss_pred CcEEEEEcccccccccC
Q 046230 270 KAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~ 286 (489)
=.++|+||+|.+..+|.
T Consensus 128 i~~iViDEaH~i~~~g~ 144 (470)
T TIGR00614 128 ITLIAVDEAHCISQWGH 144 (470)
T ss_pred cCEEEEeCCcccCcccc
Confidence 35899999999766654
No 448
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=25.65 E-value=1.6e+02 Score=26.81 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=27.8
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
..+++++|-+ +..|.+..++++.+++++|++.++.
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4567888766 4589999999999999999998873
No 449
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=25.37 E-value=4.9e+02 Score=23.24 Aligned_cols=87 Identities=11% Similarity=0.151 Sum_probs=41.3
Q ss_pred HHhHhhhcC--CCCEEEEcCCCchHHHHHHHh--cCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 175 SAILPVLMR--KGSLIISDSLNHNSIVNGARG--SGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 175 ~~~~~al~~--~g~~Vl~~~~~h~~~~~~~~~--~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.-++..+.. ++..|++...+-.+.....+. ....+..+|.+.+...++.|+.. ....+|++|+-
T Consensus 38 ~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D~~~~~~rfl~~~-----------~P~~~i~~EtE- 105 (186)
T PF04413_consen 38 RPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLDFPWAVRRFLDHW-----------RPDLLIWVETE- 105 (186)
T ss_dssp HHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---SSHHHHHHHHHHH-------------SEEEEES---
T ss_pred HHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCccCHHHHHHHHHHh-----------CCCEEEEEccc-
Confidence 445555554 455666555444444333332 24556678888888889988874 35677888752
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEE-Ecccc
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYL-DEAHS 280 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~-DEa~s 280 (489)
-.+.+...|++.|+.+++ +.--+
T Consensus 106 -------lWPnll~~a~~~~ip~~LvNarls 129 (186)
T PF04413_consen 106 -------LWPNLLREAKRRGIPVVLVNARLS 129 (186)
T ss_dssp ---------HHHHHH-----S-EEEEEE---
T ss_pred -------cCHHHHHHHhhcCCCEEEEeeeec
Confidence 467899999999986554 43333
No 450
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=25.24 E-value=1.1e+02 Score=28.95 Aligned_cols=36 Identities=11% Similarity=0.156 Sum_probs=24.5
Q ss_pred EEEEcCcCCCC-CCCCChHHHHHHHHHcCcEEEEEcc
Q 046230 243 MVIVEGIYSME-GELCKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 243 ~vive~v~s~~-G~~~~l~~i~~l~~~~~~~li~DEa 278 (489)
++++.|-.+-. +....+++|.+.+++.++.+++|.=
T Consensus 104 avVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 104 AVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 45555544432 2223378999999999999999964
No 451
>PRK13509 transcriptional repressor UlaR; Provisional
Probab=24.83 E-value=5.9e+02 Score=23.96 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCC
Q 046230 148 HNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSL 193 (489)
Q Consensus 148 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~ 193 (489)
-..+++..++++...+.|++.+|+.+.. +++.+...+-.|++.+.
T Consensus 80 K~~IA~~Aa~~I~~g~~Ifld~GsT~~~-la~~L~~~~ltVvTnsl 124 (251)
T PRK13509 80 KVRIAKAASQLCNPGESVVINCGSTAFL-LGRELCGKPVQIITNYL 124 (251)
T ss_pred HHHHHHHHHHhCCCCCEEEECCcHHHHH-HHHHhCCCCeEEEeCCH
Confidence 3567777888888889999999998753 44444444445555544
No 452
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=24.25 E-value=39 Score=32.48 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=23.3
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
|+...++++++.|+++|+-||+|=|..
T Consensus 49 Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 49 GTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred chhhhhhhhhhccccccceEEEeeecc
Confidence 334558999999999999999999976
No 453
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=24.23 E-value=6.7e+02 Score=24.74 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=37.8
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCC-CchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 046230 171 YVTNSAILPVLMRKGSLIISDSL-NHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~-~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~ 232 (489)
.++..+++.++.++..+|-+-+. +|-.+...+...++.++....+|++.+.++.......|-
T Consensus 139 ~evleaale~~~g~~pLInSat~en~~~i~~lA~~y~~~Vva~s~~Dln~ak~L~~~l~~~Gi 201 (319)
T PRK04452 139 AEVLEKVAEAAEGERCLLGSAEEDNYKKIAAAAMAYGHAVIAWSPLDINLAKQLNILLTELGV 201 (319)
T ss_pred HHHHHHHHHHhCCCCCEEEECCHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHHHHHHHHHcCC
Confidence 44446666666666556554443 455555666667777777666777777766665544443
No 454
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=23.91 E-value=2.2e+02 Score=29.59 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=26.8
Q ss_pred ChHHHHHHHHHcCcEEEEEcc----------cccccccCCCCcccc
Q 046230 258 KFPEIIAICKKYKAYIYLDEA----------HSIGAVGKTGRGVCE 293 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa----------~s~g~~g~~G~~~~~ 293 (489)
--++|+++++.+|+.++.-.+ ..+|++|-||..+..
T Consensus 245 A~~~L~af~E~~~iPv~ETQaGKsal~~dhplNlG~vGvTGt~AAN 290 (617)
T COG3962 245 AREALRAFAETHGIPVVETQAGKSALAWDHPLNLGGVGVTGTLAAN 290 (617)
T ss_pred HHHHHHHHHHhcCCceEeccCCcccccccCccccccccccchHHHH
Confidence 478999999999999886443 346777888776443
No 455
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=23.65 E-value=1.6e+02 Score=27.28 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC----------CChHHHHHHHHHcCcEEEE
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL----------CKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~----------~~l~~i~~l~~~~~~~li~ 275 (489)
+++++++.++....+ .+.-+|+++++....... .-+..|.++|+++|+.+++
T Consensus 107 ~~~~l~~~i~~~~~~--------~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKE--------HGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHh--------cCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 678888877765443 234577788776542111 1157888999999986664
No 456
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=23.25 E-value=1.6e+02 Score=22.31 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcC
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDS 192 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~ 192 (489)
++|.+.+.+-+|.+..+..+|+..-. ..++.-|..+|+.+..+.
T Consensus 23 ~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~ 67 (78)
T PF10678_consen 23 EELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDD 67 (78)
T ss_pred HHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCC
Confidence 78999999999998888776655433 666777778888877654
No 457
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=23.21 E-value=3.6e+02 Score=22.74 Aligned_cols=65 Identities=18% Similarity=0.361 Sum_probs=38.7
Q ss_pred EEEeCccHHHH-HHhHhhhcCCCC-EEEEcCCC-----chHHHHHHHhcCCeEEEecC--CCHHHHHHHHHHHH
Q 046230 164 AIVFGMGYVTN-SAILPVLMRKGS-LIISDSLN-----HNSIVNGARGSGATIRVFQH--NTPSHLEEVLREQI 228 (489)
Q Consensus 164 ~i~~~sG~~a~-~~~~~al~~~g~-~Vl~~~~~-----h~~~~~~~~~~g~~~~~~~~--~d~~~Le~~l~~~~ 228 (489)
.++++.|+... ..+...+...|. .|+....+ .......+...+..+..++. .+.+++++.+++..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 45667777776 777777776644 43333322 22233334445666666654 48888888888765
No 458
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=23.10 E-value=2e+02 Score=26.17 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=28.2
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
..+.+++|-+ +..|.+...+++.++|++|++.+|
T Consensus 157 ~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 3467777765 458999999999999999999876
No 459
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=22.96 E-value=7.3e+02 Score=24.34 Aligned_cols=112 Identities=22% Similarity=0.186 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCC-CEEEeCccHHHH----HHhHhhhcCCCCEEEEcCCC--ch--HHHHHHHhcCCeEEEecCC-CH-
Q 046230 149 NELEECVARFVGKP-AAIVFGMGYVTN----SAILPVLMRKGSLIISDSLN--HN--SIVNGARGSGATIRVFQHN-TP- 217 (489)
Q Consensus 149 ~~l~~~la~~~g~~-~~i~~~sG~~a~----~~~~~al~~~g~~Vl~~~~~--h~--~~~~~~~~~g~~~~~~~~~-d~- 217 (489)
..|+=.+.+.+... +.++.-.|.++| .+++.+..+-+++.+.+... |. ..+.-..+.|+.++.++.. |+
T Consensus 50 RKLefll~eal~~g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~ 129 (323)
T COG2515 50 RKLEFLLGEALRKGADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIG 129 (323)
T ss_pred HHHHHHHhhhhhcCCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChh
Confidence 45655565555443 456666667777 22333344556666666554 11 1223345568887776544 33
Q ss_pred --HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh---HHHHHHHHH
Q 046230 218 --SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF---PEIIAICKK 268 (489)
Q Consensus 218 --~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l---~~i~~l~~~ 268 (489)
..++....+...+| .+-.+|.++-.|+.|..-.. .||.+.+++
T Consensus 130 ~~~~~~~~~e~~~~~g--------~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 130 INASAEELAEEVRKQG--------GKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred hchhhHHHHHHHHhcC--------CCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 22333332222222 34456656556776666554 455555554
No 460
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=22.90 E-value=6.6e+02 Score=23.87 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=44.3
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--CHHHHHHHHHH
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--TPSHLEEVLRE 226 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--d~~~Le~~l~~ 226 (489)
..+.++||-.+- .+...-+.+=...|+++...--+-..+.+..|++++.+... +-|.+.+.+.+
T Consensus 75 gvithSSGNHaqAlalaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~~~sRE~va~~lte 141 (323)
T KOG1251|consen 75 GVITHSSGNHAQALALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPTVESRESVAKDLTE 141 (323)
T ss_pred ceEeecCCcHHHHHHHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCccchHHHHHHHHHH
Confidence 466778998776 33333455666788888887778888889999999887543 45555555544
No 461
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=22.23 E-value=1.8e+02 Score=21.96 Aligned_cols=45 Identities=22% Similarity=0.281 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCEEEeCccHHHH-HHhHhhhcCCCCEEEEcCC
Q 046230 149 NELEECVARFVGKPAAIVFGMGYVTN-SAILPVLMRKGSLIISDSL 193 (489)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~ 193 (489)
++|++.+.+-+|.+..+-.+|...-. ..++.-|.++|+.+-.+..
T Consensus 21 ~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgKfi~~~~g 66 (77)
T TIGR03853 21 ESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGKFIESDGG 66 (77)
T ss_pred HHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCCEeecCCc
Confidence 78999999999998777666655433 6667777788888776543
No 462
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=22.14 E-value=1.5e+02 Score=28.55 Aligned_cols=118 Identities=19% Similarity=0.335 Sum_probs=62.6
Q ss_pred CCCCCCCC-----hHHHHHHHHHcCc--EEEEEcccccccccCCCCccc--------cccCCCCCCccEEEcccccccCC
Q 046230 251 SMEGELCK-----FPEIIAICKKYKA--YIYLDEAHSIGAVGKTGRGVC--------ELLEVDTADVDIMMGTFTKSFGS 315 (489)
Q Consensus 251 s~~G~~~~-----l~~i~~l~~~~~~--~li~DEa~s~g~~g~~G~~~~--------~~~~v~p~~~Di~~~t~sK~~g~ 315 (489)
.+-|...| --++.++++|++. +.++|-.-..-+.+..-+|.. +..+++- -+++-..+- |+
T Consensus 126 rNFGm~~PeGyRKAlRlm~~AekF~lPiitfIDT~GAypG~~AEErGQ~eAIA~nL~em~~Lkv---PiI~iVIGE--Gg 200 (317)
T COG0825 126 RNFGMPRPEGYRKALRLMKLAEKFGLPIITFIDTPGAYPGIGAEERGQSEAIARNLREMARLKV---PIISIVIGE--GG 200 (317)
T ss_pred hcCCCCCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcchhhcccHHHHHHHHHHHhCCCC---CEEEEEecC--CC
Confidence 34455445 3478899999985 566887755335554433321 2234431 244222233 55
Q ss_pred cceEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC
Q 046230 316 CGGYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGF 390 (489)
Q Consensus 316 ~GG~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 390 (489)
.||+++. ..+.+-.+. +++ | +..+|-.||+++- ....+.....+....-...|+++|+
T Consensus 201 SGGALAi~vad~V~mle---~s~-y-SVisPEG~AsILW------------kD~~ka~eAAe~mkita~dLk~lgi 259 (317)
T COG0825 201 SGGALAIGVADRVLMLE---NST-Y-SVISPEGCASILW------------KDASKAKEAAEAMKITAHDLKELGI 259 (317)
T ss_pred chhhHHhhHHHHHHHHH---hce-e-eecChhhhhhhhh------------cChhhhHHHHHHcCCCHHHHHhCCC
Confidence 4666532 222222222 222 2 2378888887764 2344555566666666677788765
No 463
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=22.05 E-value=75 Score=33.97 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=27.8
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcccccccccCCC
Q 046230 253 EGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTG 288 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G 288 (489)
-|+...++++++.|+++|+-+|+|-|+. .++..+
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~N--H~~~~~ 189 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYN--HFGPEG 189 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccC--CCCCcc
Confidence 3556679999999999999999999987 555544
No 464
>PRK08638 threonine dehydratase; Validated
Probab=21.79 E-value=7e+02 Score=24.62 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=38.6
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 215 (489)
..+..++|..+. .+...+..+-...|+++..........++..|++++.++.+
T Consensus 77 ~vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 130 (333)
T PRK08638 77 GVVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDN 130 (333)
T ss_pred eEEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcC
Confidence 344557777776 45555556777888888887777778889999999887643
No 465
>PRK00083 frr ribosome recycling factor; Reviewed
Probab=21.71 E-value=4.8e+02 Score=23.43 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=43.9
Q ss_pred eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 400 VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+-+..+++.....+..+++..++-+.|.. .++.||+.+| ..|+|--..++..+.+..++.
T Consensus 64 ~l~I~p~D~~~i~~I~kAI~~s~lgl~P~~------dg~~Iri~iP-~lT~E~R~elvK~~k~~~E~a 124 (185)
T PRK00083 64 TLLIQPWDKSMLKAIEKAIRASDLGLNPSN------DGTVIRLPIP-PLTEERRKELVKQVKKEAEEA 124 (185)
T ss_pred EEEEEeCCHhHHHHHHHHHHHCCCCCCccc------CCCEEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 344555666667788889998888777422 3468999986 688888888887777766553
No 466
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=21.63 E-value=2.7e+02 Score=23.78 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH-HHHHHH----HHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP-EIIAIC----KKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~-~i~~l~----~~~~~-~li~DEa~s 280 (489)
+.+.|.+++++ +....|+++-+.+|+|...+.. .+.+++ +++++ ..+.||=-|
T Consensus 41 ~~~~l~~li~~------------~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 41 DFNALLKLVKE------------YQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hHHHHHHHHHH------------hCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 67788888887 4667788888889999887733 233333 33454 556788765
No 467
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=21.42 E-value=6.6e+02 Score=24.06 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=65.1
Q ss_pred CcccCCCcchhHHHHHHHHHHHhCCC------------------CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHH
Q 046230 137 SSRVDGGTLMVHNELEECVARFVGKP------------------AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSI 198 (489)
Q Consensus 137 ~~~~~~g~~~~~~~l~~~la~~~g~~------------------~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~ 198 (489)
+++.+.|..+-...+-.+.++-.|.+ |.+-+...-+.|..+++.+.+.++-|+.-+.-+.
T Consensus 86 SPYsFQGlge~gL~~l~~a~~~~Gl~vvtEvm~~~~~e~~~~y~DilqvGARNMQNF~LLke~G~~~kPvLLKRg~~a-- 163 (286)
T COG2876 86 SPYSFQGLGEEGLKLLKRAADETGLPVVTEVMDVRDVEAAAEYADILQVGARNMQNFALLKEVGRQNKPVLLKRGLSA-- 163 (286)
T ss_pred CcccccccCHHHHHHHHHHHHHcCCeeEEEecCHHHHHHHHhhhhHHHhcccchhhhHHHHHhcccCCCeEEecCccc--
Confidence 44555565555555666666666653 2233344445555555555444444444433332
Q ss_pred HHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCCC---CCCCChHHHHHHHHHcCcEEE
Q 046230 199 VNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSME---GELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 199 ~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~~---G~~~~l~~i~~l~~~~~~~li 274 (489)
..+++-.+-+...++| +.-+|++| ++-+-+ -...++..+..+.+.-...+|
T Consensus 164 -----------------TieEwL~AAEYI~s~G--------N~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVi 218 (286)
T COG2876 164 -----------------TIEEWLNAAEYILSHG--------NGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVI 218 (286)
T ss_pred -----------------cHHHHHHHHHHHHhCC--------CCcEEEEecccccccccccceechHHHHHHHhhcCCCEE
Confidence 2333333333333443 23355555 333322 223568999999999999999
Q ss_pred EEcccccc
Q 046230 275 LDEAHSIG 282 (489)
Q Consensus 275 ~DEa~s~g 282 (489)
+|-.|+.|
T Consensus 219 vDpSH~~G 226 (286)
T COG2876 219 VDPSHATG 226 (286)
T ss_pred ECCCCccc
Confidence 99999844
No 468
>TIGR00284 dihydropteroate synthase-related protein. This protein has been found so far only in the Archaea, and in particular in those archaea that lack a bacterial-type dihydropteroate synthase. The central region of this protein shows considerable homology to the amino-terminal half of dihydropteroate synthases, while the carboxyl-terminal region shows homology to the small, uncharacterized protein slr0651 of Synechocystis PCC6803.
Probab=21.36 E-value=5.8e+02 Score=26.98 Aligned_cols=117 Identities=14% Similarity=0.167 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhCC-CCEEEeCccHH-----HHHHhHhhhcCC-CCEEEEcCCCchHHHHHHHhcCCeEEE-ecCCCHHHH
Q 046230 149 NELEECVARFVGK-PAAIVFGMGYV-----TNSAILPVLMRK-GSLIISDSLNHNSIVNGARGSGATIRV-FQHNTPSHL 220 (489)
Q Consensus 149 ~~l~~~la~~~g~-~~~i~~~sG~~-----a~~~~~~al~~~-g~~Vl~~~~~h~~~~~~~~~~g~~~~~-~~~~d~~~L 220 (489)
.++.++..++... .+.|=++.++. ...-++.++... +..|.+|+.+......+++. |+.++. +.....+.+
T Consensus 165 ~~i~~~A~~~~~~GADIIDIG~~st~p~~~~v~~~V~~l~~~~~~pISIDT~~~~v~eaAL~a-GAdiINsVs~~~~d~~ 243 (499)
T TIGR00284 165 DGIEGLAARMERDGADMVALGTGSFDDDPDVVKEKVKTALDALDSPVIADTPTLDELYEALKA-GASGVIMPDVENAVEL 243 (499)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCcHHHHHHHHHHHHhhCCCcEEEeCCCHHHHHHHHHc-CCCEEEECCccchhHH
Confidence 3344444444432 24444444332 234555555554 45577777776666666665 777654 111123334
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCc-EEEEEcccc
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~-~li~DEa~s 280 (489)
...+.+ ....+|++.. + .......+.+.++.|+++|+ -+|+|-..+
T Consensus 244 ~~l~a~------------~g~~vVlm~~-~-~~~~~~~l~~~ie~a~~~Gi~~IIlDPglg 290 (499)
T TIGR00284 244 ASEKKL------------PEDAFVVVPG-N-QPTNYEELAKAVKKLRTSGYSKVAADPSLS 290 (499)
T ss_pred HHHHHH------------cCCeEEEEcC-C-CCchHHHHHHHHHHHHHCCCCcEEEeCCCC
Confidence 443443 1334555542 1 12223568899999999999 899998764
No 469
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=21.33 E-value=5.1e+02 Score=24.55 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=17.6
Q ss_pred ChHHHHHHHHHcCcEEEEEc
Q 046230 258 KFPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DE 277 (489)
.+.++++.+++++..+|+|-
T Consensus 107 ~~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 107 SFKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred HHHHHHHHHHhcCCCEEEEh
Confidence 37889999999999999995
No 470
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=21.16 E-value=5.2e+02 Score=23.01 Aligned_cols=61 Identities=11% Similarity=0.145 Sum_probs=43.4
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
..+-+..+++.....+..++.+.++-+.|. ..++.||+.+| ..|+|-=..++..+.+..++
T Consensus 54 ~~l~I~p~D~~~~~~I~kAI~~s~lglnP~------~dg~~Iri~iP-~lT~E~RkelvK~~k~~~E~ 114 (176)
T TIGR00496 54 RTLVIQPFDKSNINAIEKAIQRSDLGLNPN------NDGSVIRVNFP-PLTEERRKELVKHAKKIAEQ 114 (176)
T ss_pred CEEEEecCChhhHHHHHHHHHHCCCCCCcc------cCCCEEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 345555667777788899999998887742 23468999986 57887777777777666554
No 471
>PRK13453 F0F1 ATP synthase subunit B; Provisional
Probab=21.11 E-value=1.5e+02 Score=26.14 Aligned_cols=20 Identities=15% Similarity=0.393 Sum_probs=16.3
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 046230 3 SIPYLTALTTYFSYGLLFVF 22 (489)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (489)
.++|++++++-++|+||+++
T Consensus 15 ~~~~~t~~~~iInFliL~~l 34 (173)
T PRK13453 15 GVEWGTVIVTVLTFIVLLAL 34 (173)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 46788999999999887765
No 472
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=20.97 E-value=2.5e+02 Score=26.46 Aligned_cols=53 Identities=21% Similarity=0.220 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC--CC-C-------hHHHHHHHHHcCcEEEE
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE--LC-K-------FPEIIAICKKYKAYIYL 275 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~--~~-~-------l~~i~~l~~~~~~~li~ 275 (489)
+++++++.++....+. .+.-+|+++.++-+... .. . .++|.++|+++|+.+|+
T Consensus 113 ~~~~i~~~i~~~~~~~-------~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 113 TIDDIESKIRRLKREG-------KKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp BHHHHHHHHHHHHHHS-------TTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHHHHHHHHHHHHhhc-------cCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 7888888888765442 24457777766544321 11 1 46899999999999887
No 473
>PLN02672 methionine S-methyltransferase
Probab=20.91 E-value=6.8e+02 Score=29.34 Aligned_cols=114 Identities=13% Similarity=0.150 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhCC--------CCEEEeCccHHHHHHhHhhh------cCCCCEEEEcCCCchHHHHHHHhcC--------
Q 046230 149 NELEECVARFVGK--------PAAIVFGMGYVTNSAILPVL------MRKGSLIISDSLNHNSIVNGARGSG-------- 206 (489)
Q Consensus 149 ~~l~~~la~~~g~--------~~~i~~~sG~~a~~~~~~al------~~~g~~Vl~~~~~h~~~~~~~~~~g-------- 206 (489)
..++..+|.|+.. +.++++.+-..|+..+++.+ +..+-.- .-+..+...+...+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 504 (1082)
T PLN02672 429 KRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTR----WLPKKWLTSLAIENATSDSKSD 504 (1082)
T ss_pred hHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhc----cCCHHHHhHhhhhcccccCccC
Confidence 6788888888753 46777899888886555543 3333111 11112222222222
Q ss_pred CeEEEe--cCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc
Q 046230 207 ATIRVF--QHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 207 ~~~~~~--~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~ 279 (489)
..+..+ |+. -+.+.++|++. +.-+|++.--....-+..-++.|.+.+++.|+.|++|+.-
T Consensus 505 ~~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 505 DVITVIEAPRQ-SDLVIELIKKL------------KPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred CeEEEEeCCCc-chHHHHHHHhC------------CCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhh
Confidence 222222 222 23556666653 3335554332221112234889999999999999999873
No 474
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.69 E-value=2.3e+02 Score=26.38 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=27.6
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
.+.+++|- .+.+|.+..++++.++|++|++.+|
T Consensus 173 P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 173 PAGVLCEL-MNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred ceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEE
Confidence 46777775 4567999999999999999998775
No 475
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.69 E-value=2.4e+02 Score=26.04 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=27.8
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
.+.+++|-+ +..|.+..++++.+++++|++.++
T Consensus 168 p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 168 EAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred ceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 467777764 567999999999999999999875
No 476
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=20.64 E-value=76 Score=34.99 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=31.8
Q ss_pred EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 243 MVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 243 ~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
...+++-|+..|.+..++++++-|++.|+-||+|-|+.
T Consensus 231 y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV~N 268 (688)
T TIGR02100 231 FFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDVVYN 268 (688)
T ss_pred ccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 44467777655777889999999999999999999976
No 477
>cd00520 RRF Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of protein synthesis. RRF is believed to bind the ribosome at the A-site in a manner that mimics tRNA, but the specific mechanisms remain unclear. RRF is essential for bacterial growth. It is not necessary for cell growth in archaea or eukaryotes, but is found in mitochondria or chloroplasts of some eukaryotic species.
Probab=20.62 E-value=5.5e+02 Score=22.87 Aligned_cols=61 Identities=13% Similarity=0.150 Sum_probs=43.0
Q ss_pred eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 400 VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+-+..++......+..++++.++-+.|. ..++.||+.+| ..|+|--..++..+.+..++.
T Consensus 60 ~l~I~p~D~~~i~~I~kAI~~s~l~l~P~------~dg~~iri~iP-~lT~E~R~~lvK~~k~~~E~~ 120 (179)
T cd00520 60 TIVINPFDKSAIKAIEKAILNSDLGLNPN------NDGAVIRVNLP-PLTEERRKELVKDAKKIAEEA 120 (179)
T ss_pred EEEEeecchhhHHHHHHHHHHCCCCCCcC------cCCCEEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 45555566666778888888888877742 12358999975 688888777777777665553
No 478
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional
Probab=20.48 E-value=1.1e+03 Score=25.52 Aligned_cols=17 Identities=41% Similarity=0.597 Sum_probs=13.1
Q ss_pred cEEEEEcccccccccCC
Q 046230 271 AYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~ 287 (489)
.++|+||+|.+..+|..
T Consensus 141 ~~iVIDEaH~i~~~G~~ 157 (607)
T PRK11057 141 ALLAVDEAHCISQWGHD 157 (607)
T ss_pred CEEEEeCccccccccCc
Confidence 58999999997666543
No 479
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=20.41 E-value=74 Score=33.38 Aligned_cols=29 Identities=14% Similarity=0.091 Sum_probs=24.7
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 252 MEGELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
.-|+...|+++++.|+++|+.||+|-|.-
T Consensus 76 ~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 76 KYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred CcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34556679999999999999999999954
No 480
>PRK11633 cell division protein DedD; Provisional
Probab=20.29 E-value=2.5e+02 Score=26.21 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=39.0
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+...+..+...|...|+-....- ..+..+.+.|+.+....++++++.++..|++.
T Consensus 159 n~~~A~~l~~kL~~~G~~Ay~~~--~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 159 NADKVNEIVAKLRLSGYRVYTVP--STPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred CHHHHHHHHHHHHHCCCeeEEEe--eecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 44567789999999988766321 11222345666666689999999999999875
No 481
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=20.27 E-value=9.9e+02 Score=24.89 Aligned_cols=36 Identities=3% Similarity=-0.120 Sum_probs=23.4
Q ss_pred ccEEEEEcCcCCCCCCCCC--------hHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGIYSMEGELCK--------FPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~--------l~~i~~l~~~~~~~li~ 275 (489)
..+.++.+...+..|...| ......||++.|+.+|.
T Consensus 210 ~~vgiL~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVp 253 (454)
T PRK05906 210 EVVGIVGDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIA 253 (454)
T ss_pred CEEEEEeCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEE
Confidence 4555666554433454433 57888899999988876
No 482
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=20.16 E-value=1.8e+02 Score=28.65 Aligned_cols=52 Identities=19% Similarity=0.423 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCccEEEEE--------cCcCCCCCCCCChHHHHHHHHHcCcEEEEE
Q 046230 217 PSHLEEVLREQIAEGQPRTHRPWKKIMVIV--------EGIYSMEGELCKFPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 217 ~~~Le~~l~~~~~~g~~~~~~~~~~~~viv--------e~v~s~~G~~~~l~~i~~l~~~~~~~li~D 276 (489)
.+..++.|++..+.| -+++.+-+ ++.+.-+|. .+|.+.+++|+++|.++|+-
T Consensus 23 ~~~W~~~l~k~ka~G-------~n~v~~yv~W~~he~~~g~~df~g~-~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 23 PEYWRDRLQKMKAAG-------LNTVSTYVPWNLHEPEEGQFDFTGN-RDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp GGGHHHHHHHHHHTT--------SEEEEE--HHHHSSBTTB---SGG-G-HHHHHHHHHHTT-EEEEE
T ss_pred hhHHHHHHHHHHhCC-------cceEEEeccccccCCCCCcccccch-hhHHHHHHHHHHcCcEEEec
Confidence 566677777665554 23333333 344444433 57999999999999998865
Done!