Query 046230
Match_columns 489
No_of_seqs 343 out of 3182
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:25:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w8t_A SPT, serine palmitoyltr 100.0 4.7E-48 1.6E-52 397.5 38.1 371 67-470 46-418 (427)
2 3kki_A CAI-1 autoinducer synth 100.0 3E-46 1E-50 381.7 33.6 380 51-468 26-405 (409)
3 3tqx_A 2-amino-3-ketobutyrate 100.0 7E-45 2.4E-49 369.6 41.9 372 67-469 26-398 (399)
4 1fc4_A 2-amino-3-ketobutyrate 100.0 3.9E-43 1.3E-47 357.4 41.0 373 66-469 26-399 (401)
5 4atq_A 4-aminobutyrate transam 100.0 1.6E-43 5.6E-48 363.2 33.0 356 65-466 44-454 (456)
6 4ao9_A Beta-phenylalanine amin 100.0 3.1E-44 1.1E-48 367.0 26.1 342 65-468 67-447 (454)
7 1bs0_A Protein (8-amino-7-oxon 100.0 7.9E-42 2.7E-46 345.7 38.8 363 66-463 21-383 (384)
8 3a2b_A Serine palmitoyltransfe 100.0 1.2E-41 4E-46 346.2 39.5 371 66-470 25-395 (398)
9 4e3q_A Pyruvate transaminase; 100.0 3.9E-42 1.3E-46 354.2 33.9 351 66-467 48-468 (473)
10 2oat_A Ornithine aminotransfer 100.0 6.8E-42 2.3E-46 352.6 30.0 345 67-466 58-438 (439)
11 2bwn_A 5-aminolevulinate synth 100.0 5.3E-41 1.8E-45 341.8 35.4 354 98-467 44-400 (401)
12 1z7d_A Ornithine aminotransfer 100.0 1.2E-41 4.3E-46 350.1 29.0 349 67-470 47-432 (433)
13 3hmu_A Aminotransferase, class 100.0 3.1E-41 1.1E-45 350.5 30.8 352 66-468 36-453 (472)
14 3i5t_A Aminotransferase; pyrid 100.0 9.1E-41 3.1E-45 347.5 34.0 351 66-469 35-456 (476)
15 3tfu_A Adenosylmethionine-8-am 100.0 4.1E-40 1.4E-44 340.8 29.0 348 68-468 55-454 (457)
16 3gju_A Putative aminotransfera 100.0 1.1E-39 3.7E-44 338.3 32.0 354 66-468 32-457 (460)
17 3oks_A 4-aminobutyrate transam 100.0 6E-40 2.1E-44 339.3 28.9 353 65-466 41-450 (451)
18 4ffc_A 4-aminobutyrate aminotr 100.0 6.9E-40 2.4E-44 339.0 28.4 358 65-468 44-450 (453)
19 3nx3_A Acoat, acetylornithine 100.0 2.4E-39 8.1E-44 329.0 30.2 344 66-466 17-394 (395)
20 4a6r_A Omega transaminase; tra 100.0 3.6E-39 1.2E-43 334.3 30.6 352 66-468 31-450 (459)
21 3n5m_A Adenosylmethionine-8-am 100.0 1E-38 3.6E-43 330.2 31.9 355 66-466 30-451 (452)
22 3dod_A Adenosylmethionine-8-am 100.0 3.4E-39 1.2E-43 333.5 28.2 347 67-467 26-443 (448)
23 3i4j_A Aminotransferase, class 100.0 3.4E-38 1.2E-42 324.2 32.7 356 66-467 10-428 (430)
24 2pb2_A Acetylornithine/succiny 100.0 8.7E-39 3E-43 327.7 28.1 342 67-467 39-418 (420)
25 3dxv_A Alpha-amino-epsilon-cap 100.0 5.5E-39 1.9E-43 331.0 26.0 352 66-468 24-426 (439)
26 3l44_A Glutamate-1-semialdehyd 100.0 9.7E-39 3.3E-43 328.7 26.6 343 66-467 36-430 (434)
27 3k28_A Glutamate-1-semialdehyd 100.0 1.7E-38 5.9E-43 326.4 25.9 344 66-467 34-427 (429)
28 3ruy_A Ornithine aminotransfer 100.0 5.2E-38 1.8E-42 318.6 27.5 342 65-464 16-391 (392)
29 1ohv_A 4-aminobutyrate aminotr 100.0 4.8E-39 1.7E-43 334.1 19.5 353 66-467 44-471 (472)
30 4e77_A Glutamate-1-semialdehyd 100.0 8.3E-38 2.8E-42 321.3 28.2 344 66-466 34-428 (429)
31 3fq8_A Glutamate-1-semialdehyd 100.0 2.3E-37 7.8E-42 317.7 27.3 344 66-466 33-426 (427)
32 2yky_A Beta-transaminase; tran 100.0 5.5E-41 1.9E-45 345.3 0.0 340 66-467 81-460 (465)
33 2epj_A Glutamate-1-semialdehyd 100.0 2E-37 6.7E-42 319.0 26.0 343 67-467 38-431 (434)
34 4a0g_A Adenosylmethionine-8-am 100.0 7.7E-39 2.6E-43 350.3 14.3 352 68-468 357-829 (831)
35 4adb_A Succinylornithine trans 100.0 8.9E-37 3E-41 310.8 28.3 348 62-468 16-401 (406)
36 2cjg_A L-lysine-epsilon aminot 100.0 7.4E-37 2.5E-41 316.0 26.8 347 65-467 31-448 (449)
37 1zod_A DGD, 2,2-dialkylglycine 100.0 3.8E-36 1.3E-40 309.2 29.7 354 67-467 25-432 (433)
38 2ord_A Acoat, acetylornithine 100.0 7.3E-37 2.5E-41 310.8 23.4 341 66-466 21-396 (397)
39 2e7u_A Glutamate-1-semialdehyd 100.0 1.6E-36 5.5E-41 311.2 25.1 337 67-463 34-423 (424)
40 1sff_A 4-aminobutyrate aminotr 100.0 6.4E-36 2.2E-40 306.5 29.1 350 67-467 23-424 (426)
41 3a8u_X Omega-amino acid--pyruv 100.0 8.2E-36 2.8E-40 308.2 29.6 349 67-467 32-447 (449)
42 3nra_A Aspartate aminotransfer 100.0 4E-35 1.4E-39 298.6 31.3 339 101-467 40-405 (407)
43 1s0a_A Adenosylmethionine-8-am 100.0 6.7E-35 2.3E-39 299.5 32.0 342 71-466 29-423 (429)
44 2eo5_A 419AA long hypothetical 100.0 3.9E-35 1.3E-39 300.5 28.7 343 67-467 24-418 (419)
45 1vef_A Acetylornithine/acetyl- 100.0 3.1E-35 1.1E-39 298.6 26.8 338 66-464 26-394 (395)
46 2cy8_A D-phgat, D-phenylglycin 100.0 6.9E-35 2.4E-39 301.6 26.4 342 66-468 38-436 (453)
47 3dzz_A Putative pyridoxal 5'-p 100.0 8.7E-34 3E-38 287.0 31.3 356 67-467 9-389 (391)
48 3fdb_A Beta C-S lyase, putativ 100.0 1.1E-34 3.8E-39 292.3 24.2 344 72-466 10-375 (377)
49 3l8a_A METC, putative aminotra 100.0 8.2E-34 2.8E-38 290.7 30.5 354 69-465 43-420 (421)
50 2eh6_A Acoat, acetylornithine 100.0 3.9E-34 1.3E-38 288.2 25.0 335 67-463 10-374 (375)
51 3kax_A Aminotransferase, class 100.0 9.8E-33 3.3E-37 278.5 31.7 349 71-464 9-382 (383)
52 1c7n_A Cystalysin; transferase 100.0 9E-33 3.1E-37 280.7 31.0 353 67-468 5-394 (399)
53 2zc0_A Alanine glyoxylate tran 100.0 2.3E-32 7.8E-37 278.4 32.4 350 99-468 33-405 (407)
54 4dq6_A Putative pyridoxal phos 100.0 1.9E-32 6.5E-37 277.2 30.0 352 71-464 13-390 (391)
55 2z61_A Probable aspartate amin 100.0 1.5E-32 5.3E-37 276.2 29.1 329 99-465 28-369 (370)
56 3ly1_A Putative histidinol-pho 100.0 1.2E-31 4.1E-36 267.8 34.1 323 99-466 15-351 (354)
57 3aow_A Putative uncharacterize 100.0 5.5E-32 1.9E-36 279.4 32.5 350 99-467 75-445 (448)
58 1d2f_A MALY protein; aminotran 100.0 2.3E-31 8E-36 269.5 36.1 346 72-467 10-389 (390)
59 2zyj_A Alpha-aminodipate amino 100.0 1.9E-32 6.6E-37 278.2 27.7 342 99-467 31-393 (397)
60 2dou_A Probable N-succinyldiam 100.0 9.3E-32 3.2E-36 271.1 31.3 330 99-464 24-375 (376)
61 1vp4_A Aminotransferase, putat 100.0 3.4E-32 1.2E-36 279.0 28.3 351 99-468 42-419 (425)
62 1gd9_A Aspartate aminotransfer 100.0 3.1E-31 1.1E-35 268.4 33.6 337 100-468 26-387 (389)
63 1j32_A Aspartate aminotransfer 100.0 1.5E-31 5.2E-36 270.6 30.9 333 99-467 29-387 (388)
64 3piu_A 1-aminocyclopropane-1-c 100.0 1.5E-31 5.1E-36 275.1 31.1 340 111-468 43-433 (435)
65 2x5d_A Probable aminotransfera 100.0 1.6E-31 5.3E-36 272.9 30.1 338 99-469 36-400 (412)
66 1yiz_A Kynurenine aminotransfe 100.0 3.1E-31 1E-35 272.1 31.5 341 100-465 37-427 (429)
67 1o4s_A Aspartate aminotransfer 100.0 2.1E-31 7.3E-36 269.9 28.8 324 99-465 40-387 (389)
68 3qgu_A LL-diaminopimelate amin 100.0 7.3E-32 2.5E-36 278.5 25.8 342 99-467 68-440 (449)
69 1t3i_A Probable cysteine desul 100.0 1.1E-30 3.8E-35 266.6 33.1 340 99-468 26-414 (420)
70 3dyd_A Tyrosine aminotransfera 100.0 7.6E-31 2.6E-35 269.3 31.8 338 98-468 52-425 (427)
71 1v2d_A Glutamine aminotransfer 100.0 7.1E-31 2.4E-35 265.1 30.9 330 101-468 26-372 (381)
72 2gb3_A Aspartate aminotransfer 100.0 3.7E-31 1.3E-35 270.0 28.7 332 99-468 42-403 (409)
73 1kmj_A Selenocysteine lyase; p 100.0 1.6E-30 5.4E-35 264.1 33.3 339 99-467 21-405 (406)
74 2o1b_A Aminotransferase, class 100.0 3.6E-31 1.2E-35 269.7 27.7 334 99-466 46-402 (404)
75 3h14_A Aminotransferase, class 100.0 8.7E-31 3E-35 265.4 30.4 330 99-468 30-383 (391)
76 1u08_A Hypothetical aminotrans 100.0 1.4E-30 4.8E-35 263.4 31.3 330 100-462 30-385 (386)
77 3g0t_A Putative aminotransfera 100.0 1.9E-30 6.4E-35 266.8 31.5 336 99-466 43-436 (437)
78 3ffh_A Histidinol-phosphate am 100.0 4.2E-30 1.4E-34 257.6 33.3 317 99-463 31-362 (363)
79 3op7_A Aminotransferase class 100.0 1.2E-30 4E-35 262.8 29.1 327 100-468 27-372 (375)
80 3ei9_A LL-diaminopimelate amin 100.0 4.7E-31 1.6E-35 271.1 26.5 340 99-465 55-426 (432)
81 1xi9_A Putative transaminase; 100.0 5.5E-31 1.9E-35 268.3 26.7 333 99-467 37-403 (406)
82 3jtx_A Aminotransferase; NP_28 100.0 2.9E-30 9.9E-35 261.8 31.2 332 99-464 29-395 (396)
83 3fvs_A Kynurenine--oxoglutarat 100.0 7.8E-31 2.7E-35 268.4 26.9 342 99-466 27-421 (422)
84 3ezs_A Aminotransferase ASPB; 100.0 1.8E-30 6E-35 261.5 28.5 325 99-466 23-374 (376)
85 2o0r_A RV0858C (N-succinyldiam 100.0 3.2E-30 1.1E-34 263.1 30.0 334 101-467 26-396 (411)
86 2dr1_A PH1308 protein, 386AA l 100.0 2.1E-29 7E-34 254.3 35.5 297 145-469 52-381 (386)
87 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.1E-31 1.1E-35 266.3 21.9 322 116-467 21-370 (371)
88 3hdo_A Histidinol-phosphate am 100.0 6.9E-30 2.3E-34 255.9 30.8 324 99-465 25-353 (360)
89 1b5p_A Protein (aspartate amin 100.0 1.3E-29 4.4E-34 256.4 32.4 328 99-465 30-383 (385)
90 3e2y_A Kynurenine-oxoglutarate 100.0 2E-30 6.7E-35 264.3 26.6 337 99-462 22-408 (410)
91 3get_A Histidinol-phosphate am 100.0 8.1E-30 2.8E-34 255.7 30.4 317 100-464 30-364 (365)
92 3f9t_A TDC, L-tyrosine decarbo 100.0 1.2E-29 4E-34 256.6 31.4 326 108-465 32-396 (397)
93 1eg5_A Aminotransferase; PLP-d 100.0 1.1E-29 3.7E-34 256.0 30.6 335 101-468 3-377 (384)
94 3euc_A Histidinol-phosphate am 100.0 2.4E-29 8.2E-34 252.5 32.1 321 99-465 29-366 (367)
95 3ele_A Amino transferase; RER0 100.0 8.3E-30 2.8E-34 258.7 28.7 330 99-468 34-397 (398)
96 3zrp_A Serine-pyruvate aminotr 100.0 1.3E-28 4.3E-33 248.2 36.9 294 145-470 34-366 (384)
97 2r2n_A Kynurenine/alpha-aminoa 100.0 5.8E-29 2E-33 255.0 34.3 319 143-467 79-424 (425)
98 3cq5_A Histidinol-phosphate am 100.0 1.4E-28 4.9E-33 247.2 36.3 317 103-465 33-366 (369)
99 3isl_A Purine catabolism prote 100.0 8.6E-29 3E-33 252.4 34.2 327 113-471 15-394 (416)
100 1m32_A 2-aminoethylphosphonate 100.0 1.2E-29 4E-34 253.9 27.2 326 101-467 4-365 (366)
101 3nnk_A Ureidoglycine-glyoxylat 100.0 1.4E-28 4.9E-33 250.4 35.6 298 145-470 45-393 (411)
102 1bw0_A TAT, protein (tyrosine 100.0 1.4E-29 4.6E-34 258.7 28.1 338 100-468 33-414 (416)
103 3ftb_A Histidinol-phosphate am 100.0 1.2E-28 4.2E-33 246.5 34.1 318 99-466 25-360 (361)
104 3b46_A Aminotransferase BNA3; 100.0 6.8E-30 2.3E-34 263.7 25.5 333 99-462 56-442 (447)
105 3lws_A Aromatic amino acid bet 100.0 1.4E-30 4.8E-35 260.5 19.7 332 100-464 3-356 (357)
106 3t18_A Aminotransferase class 100.0 5.5E-29 1.9E-33 254.1 31.2 339 99-467 36-410 (413)
107 1iay_A ACC synthase 2, 1-amino 100.0 1.1E-28 3.7E-33 253.2 33.4 300 149-466 86-426 (428)
108 3rq1_A Aminotransferase class 100.0 1.3E-28 4.6E-33 251.6 33.5 343 99-468 37-416 (418)
109 3lvm_A Cysteine desulfurase; s 100.0 2.2E-29 7.6E-34 257.5 27.6 335 99-468 22-400 (423)
110 1lc5_A COBD, L-threonine-O-3-p 100.0 9.8E-29 3.3E-33 247.9 31.3 325 99-467 23-360 (364)
111 2x5f_A Aspartate_tyrosine_phen 100.0 1.9E-29 6.6E-34 258.9 26.3 332 100-467 47-429 (430)
112 3cai_A Possible aminotransfera 100.0 5.6E-29 1.9E-33 253.2 29.1 334 99-462 26-404 (406)
113 3b1d_A Betac-S lyase; HET: PLP 99.9 6.8E-33 2.3E-37 281.2 0.0 345 72-465 16-391 (392)
114 2vi8_A Serine hydroxymethyltra 100.0 3.4E-29 1.2E-33 254.5 26.6 338 99-467 23-387 (405)
115 1vjo_A Alanine--glyoxylate ami 100.0 9.7E-29 3.3E-33 250.3 29.7 292 145-464 66-392 (393)
116 3kgw_A Alanine-glyoxylate amin 100.0 3.5E-28 1.2E-32 245.7 33.1 296 145-468 55-389 (393)
117 3asa_A LL-diaminopimelate amin 100.0 3.8E-29 1.3E-33 254.3 25.7 340 99-467 32-393 (400)
118 1elu_A L-cysteine/L-cystine C- 100.0 1.1E-28 3.7E-33 249.3 28.4 317 115-462 27-387 (390)
119 3fkd_A L-threonine-O-3-phospha 100.0 3.3E-28 1.1E-32 242.6 30.4 329 73-466 3-341 (350)
120 4hvk_A Probable cysteine desul 100.0 2.7E-28 9.4E-33 245.2 29.2 322 116-468 12-374 (382)
121 4eb5_A Probable cysteine desul 100.0 1.7E-28 5.6E-33 247.3 27.3 331 102-468 3-374 (382)
122 3p1t_A Putative histidinol-pho 100.0 1.5E-27 5.2E-32 236.3 33.5 310 99-465 15-335 (337)
123 2z9v_A Aspartate aminotransfer 100.0 1.2E-27 4.1E-32 242.1 33.1 321 116-471 20-375 (392)
124 3tcm_A Alanine aminotransferas 100.0 1.7E-27 5.7E-32 249.1 34.6 333 117-471 108-498 (500)
125 1iug_A Putative aspartate amin 100.0 5.4E-28 1.8E-32 240.7 29.5 309 117-467 13-348 (352)
126 1qz9_A Kynureninase; kynurenin 100.0 8.3E-28 2.8E-32 245.3 30.8 327 99-468 28-403 (416)
127 2huf_A Alanine glyoxylate amin 100.0 1.4E-27 4.8E-32 241.6 30.8 298 145-470 51-386 (393)
128 2dkj_A Serine hydroxymethyltra 100.0 4E-28 1.4E-32 246.8 26.5 336 100-466 23-387 (407)
129 1svv_A Threonine aldolase; str 100.0 8.8E-28 3E-32 239.7 26.4 331 99-466 12-357 (359)
130 3f0h_A Aminotransferase; RER07 100.0 2E-27 6.9E-32 239.0 29.0 294 145-466 51-373 (376)
131 1jg8_A L-ALLO-threonine aldola 100.0 5E-28 1.7E-32 240.8 24.1 329 100-467 3-346 (347)
132 2rfv_A Methionine gamma-lyase; 100.0 1.1E-27 3.6E-32 243.5 26.3 312 118-463 36-396 (398)
133 2ch1_A 3-hydroxykynurenine tra 100.0 1.6E-26 5.4E-31 234.2 34.1 298 146-471 51-387 (396)
134 3gbx_A Serine hydroxymethyltra 100.0 1.2E-27 4.2E-32 244.1 25.6 333 105-467 36-396 (420)
135 3ecd_A Serine hydroxymethyltra 100.0 1E-26 3.5E-31 237.7 32.2 337 101-467 33-397 (425)
136 3vax_A Putative uncharacterize 100.0 4.3E-28 1.5E-32 246.0 20.6 342 90-466 11-399 (400)
137 1v72_A Aldolase; PLP-dependent 100.0 9.6E-28 3.3E-32 239.3 22.6 332 100-467 7-353 (356)
138 3ppl_A Aspartate aminotransfer 100.0 1.2E-27 4.2E-32 245.2 24.0 306 145-468 77-421 (427)
139 3ez1_A Aminotransferase MOCR f 100.0 3.4E-27 1.2E-31 241.6 27.0 343 101-468 26-416 (423)
140 1mdo_A ARNB aminotransferase; 100.0 1.2E-26 4.2E-31 234.8 30.3 318 101-467 9-386 (393)
141 2yrr_A Aminotransferase, class 100.0 6.2E-27 2.1E-31 232.8 27.5 292 145-466 32-352 (353)
142 1ajs_A Aspartate aminotransfer 100.0 5.8E-27 2E-31 238.9 27.9 333 99-467 29-411 (412)
143 1c4k_A Protein (ornithine deca 100.0 1.9E-28 6.6E-33 264.1 17.6 399 39-467 74-566 (730)
144 2bkw_A Alanine-glyoxylate amin 100.0 2.3E-26 7.8E-31 231.8 31.0 317 117-467 13-384 (385)
145 3n0l_A Serine hydroxymethyltra 100.0 3.2E-26 1.1E-30 233.5 32.2 336 101-467 26-389 (417)
146 1fg7_A Histidinol phosphate am 100.0 6.7E-26 2.3E-30 226.7 33.9 277 148-462 60-353 (356)
147 3uwc_A Nucleotide-sugar aminot 100.0 1.2E-26 4.1E-31 233.3 28.4 318 100-467 6-371 (374)
148 2oga_A Transaminase; PLP-depen 100.0 2.3E-27 7.8E-32 241.1 23.1 318 100-467 30-396 (399)
149 3e9k_A Kynureninase; kynurenin 100.0 6.2E-27 2.1E-31 242.7 26.7 319 117-467 80-461 (465)
150 1ax4_A Tryptophanase; tryptoph 100.0 6.8E-26 2.3E-30 234.9 34.5 339 99-468 42-442 (467)
151 2fnu_A Aminotransferase; prote 100.0 1.7E-26 5.8E-31 232.0 28.9 314 113-469 8-374 (375)
152 3dr4_A Putative perosamine syn 100.0 2.2E-26 7.5E-31 233.1 29.3 319 101-464 23-390 (391)
153 1b9h_A AHBA synthase, protein 100.0 2.4E-26 8.2E-31 232.4 29.6 310 117-466 16-387 (388)
154 3d6k_A Putative aminotransfera 100.0 4.3E-27 1.5E-31 240.9 24.2 342 102-467 34-418 (422)
155 3ihj_A Alanine aminotransferas 100.0 2.2E-26 7.4E-31 240.4 29.7 335 117-471 103-497 (498)
156 2q7w_A Aspartate aminotransfer 100.0 4.7E-27 1.6E-31 238.2 23.9 328 99-463 25-395 (396)
157 1cs1_A CGS, protein (cystathio 100.0 6.4E-26 2.2E-30 229.4 32.0 283 145-463 51-383 (386)
158 1e5e_A MGL, methionine gamma-l 100.0 1.7E-25 5.8E-30 227.7 35.0 311 117-467 33-395 (404)
159 4eu1_A Mitochondrial aspartate 100.0 9.7E-27 3.3E-31 237.2 25.1 323 100-464 41-408 (409)
160 1pff_A Methionine gamma-lyase; 100.0 1.8E-26 6.2E-31 228.2 26.0 278 150-463 2-330 (331)
161 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.3E-25 4.5E-30 232.1 33.5 334 99-468 41-432 (456)
162 3frk_A QDTB; aminotransferase, 100.0 1.9E-26 6.6E-31 232.0 26.5 303 118-465 17-366 (373)
163 1gc0_A Methionine gamma-lyase; 100.0 6.1E-26 2.1E-30 230.5 30.3 285 144-463 63-397 (398)
164 3mad_A Sphingosine-1-phosphate 99.9 5.1E-26 1.7E-30 238.9 29.7 341 103-469 94-471 (514)
165 3if2_A Aminotransferase; YP_26 99.9 1.4E-26 4.9E-31 238.4 24.9 341 100-468 31-441 (444)
166 2c81_A Glutamine-2-deoxy-scyll 99.9 1.7E-25 5.8E-30 228.6 32.7 317 117-468 15-415 (418)
167 2a7v_A Serine hydroxymethyltra 99.9 2.4E-26 8.3E-31 237.6 26.5 336 101-467 55-441 (490)
168 2ay1_A Aroat, aromatic amino a 99.9 7.9E-27 2.7E-31 236.4 22.5 328 99-463 25-392 (394)
169 3ffr_A Phosphoserine aminotran 99.9 6.3E-26 2.2E-30 226.5 28.7 311 116-464 15-361 (362)
170 3ke3_A Putative serine-pyruvat 99.9 4.3E-26 1.5E-30 230.1 26.8 295 146-468 35-377 (379)
171 1yaa_A Aspartate aminotransfer 99.9 4E-26 1.4E-30 232.8 26.6 331 99-466 28-410 (412)
172 3g7q_A Valine-pyruvate aminotr 99.9 4E-26 1.4E-30 232.9 25.7 336 99-467 30-413 (417)
173 3h7f_A Serine hydroxymethyltra 99.9 6.5E-26 2.2E-30 233.9 26.0 337 101-467 46-414 (447)
174 1uu1_A Histidinol-phosphate am 99.9 1.3E-25 4.4E-30 222.6 26.4 303 100-463 19-334 (335)
175 3mc6_A Sphingosine-1-phosphate 99.9 1.7E-25 5.9E-30 233.8 28.4 338 108-470 67-440 (497)
176 1qgn_A Protein (cystathionine 99.9 5.2E-25 1.8E-29 225.8 31.2 285 145-466 113-444 (445)
177 1wyu_B Glycine dehydrogenase s 99.9 2.4E-25 8.1E-30 231.3 29.0 322 116-466 78-440 (474)
178 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 6.1E-25 2.1E-29 225.9 31.1 319 99-465 30-434 (437)
179 4f4e_A Aromatic-amino-acid ami 99.9 1.2E-25 4.2E-30 229.9 25.7 326 100-464 49-419 (420)
180 1o69_A Aminotransferase; struc 99.9 1.3E-24 4.3E-29 220.5 32.9 316 113-465 7-385 (394)
181 3qhx_A Cystathionine gamma-syn 99.9 3.9E-25 1.3E-29 224.1 28.8 282 145-460 65-391 (392)
182 1rv3_A Serine hydroxymethyltra 99.9 1.2E-25 4E-30 234.1 25.1 336 101-466 45-430 (483)
183 2oqx_A Tryptophanase; lyase, p 99.9 5.6E-25 1.9E-29 228.0 29.8 336 99-468 40-443 (467)
184 2cb1_A O-acetyl homoserine sul 99.9 1.5E-24 5.1E-29 221.3 32.5 281 145-462 55-411 (412)
185 3vp6_A Glutamate decarboxylase 99.9 2.5E-24 8.6E-29 225.4 34.2 346 106-468 94-506 (511)
186 3nyt_A Aminotransferase WBPE; 99.9 1.5E-25 5.1E-30 225.1 23.9 300 118-463 16-360 (367)
187 3f6t_A Aspartate aminotransfer 99.9 1.1E-25 3.9E-30 236.8 24.0 334 101-470 104-528 (533)
188 3meb_A Aspartate aminotransfer 99.9 4.4E-25 1.5E-29 227.7 27.9 333 101-470 50-447 (448)
189 3fsl_A Aromatic-amino-acid ami 99.9 1.3E-25 4.4E-30 227.6 23.5 327 100-463 26-396 (397)
190 2po3_A 4-dehydrase; external a 99.9 1.5E-24 5.3E-29 222.0 31.3 308 117-467 31-386 (424)
191 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.1E-24 1.1E-28 217.1 33.0 308 111-460 8-389 (390)
192 3acz_A Methionine gamma-lyase; 99.9 3.8E-24 1.3E-28 216.6 33.4 279 145-460 58-386 (389)
193 3hbx_A GAD 1, glutamate decarb 99.9 5.7E-25 1.9E-29 229.9 26.5 328 117-469 69-446 (502)
194 2qma_A Diaminobutyrate-pyruvat 99.9 2E-24 6.9E-29 225.8 30.3 346 102-467 95-496 (497)
195 7aat_A Aspartate aminotransfer 99.9 5.7E-25 2E-29 223.3 25.1 325 101-464 29-400 (401)
196 3pj0_A LMO0305 protein; struct 99.9 2.9E-25 9.8E-30 221.9 20.7 293 143-463 45-358 (359)
197 3ndn_A O-succinylhomoserine su 99.9 2.6E-24 8.9E-29 219.3 28.0 283 144-464 79-413 (414)
198 3cog_A Cystathionine gamma-lya 99.9 2.5E-24 8.5E-29 218.9 26.8 283 145-464 66-399 (403)
199 4e1o_A HDC, histidine decarbox 99.9 2.4E-23 8E-28 216.6 34.0 306 144-467 116-478 (481)
200 1n8p_A Cystathionine gamma-lya 99.9 1.4E-24 4.9E-29 220.0 24.2 283 145-463 54-391 (393)
201 2fq6_A Cystathionine beta-lyas 99.9 3.1E-24 1E-28 218.6 25.6 284 145-462 81-413 (415)
202 3a9z_A Selenocysteine lyase; P 99.9 3.3E-24 1.1E-28 219.9 24.2 335 99-467 18-428 (432)
203 3jzl_A Putative cystathionine 99.9 1.9E-24 6.5E-29 219.2 21.8 244 147-422 60-339 (409)
204 3k40_A Aromatic-L-amino-acid d 99.9 2.9E-23 1E-27 215.4 31.0 344 105-467 71-471 (475)
205 2c0r_A PSAT, phosphoserine ami 99.9 2.3E-24 7.7E-29 215.8 21.5 310 116-467 15-361 (362)
206 2aeu_A Hypothetical protein MJ 99.9 2.6E-24 8.9E-29 216.7 22.0 287 145-468 57-372 (374)
207 2ctz_A O-acetyl-L-homoserine s 99.9 3.1E-23 1E-27 212.2 28.6 285 145-464 57-420 (421)
208 3nmy_A Xometc, cystathionine g 99.9 2.3E-23 8E-28 211.2 27.2 282 145-465 66-397 (400)
209 1ibj_A CBL, cystathionine beta 99.9 1.3E-23 4.3E-28 217.1 25.5 283 145-466 132-461 (464)
210 2okj_A Glutamate decarboxylase 99.9 1.7E-22 5.7E-27 211.6 34.2 302 145-467 131-502 (504)
211 3ri6_A O-acetylhomoserine sulf 99.9 1.9E-23 6.3E-28 213.6 26.0 283 145-464 81-429 (430)
212 2jis_A Cysteine sulfinic acid 99.9 1.7E-22 5.7E-27 212.1 34.0 305 143-466 145-514 (515)
213 1w23_A Phosphoserine aminotran 99.9 1.2E-24 4E-29 217.5 16.8 323 101-466 3-359 (360)
214 3i16_A Aluminum resistance pro 99.9 1.2E-23 4.2E-28 214.1 23.7 245 147-421 74-355 (427)
215 3hvy_A Cystathionine beta-lyas 99.9 1.8E-23 6.3E-28 212.8 24.3 245 147-421 75-355 (427)
216 3ju7_A Putative PLP-dependent 99.9 2.6E-22 8.9E-27 202.2 32.0 311 117-466 15-374 (377)
217 2dgk_A GAD-beta, GADB, glutama 99.9 9.9E-23 3.4E-27 210.4 29.6 325 117-468 55-435 (452)
218 2vyc_A Biodegradative arginine 99.9 1.7E-22 5.7E-27 219.8 28.1 308 144-467 203-605 (755)
219 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.3E-23 8E-28 214.5 20.2 286 145-468 56-354 (446)
220 2z67_A O-phosphoseryl-tRNA(SEC 99.9 5.6E-22 1.9E-26 204.9 29.8 297 145-464 132-455 (456)
221 3k7y_A Aspartate aminotransfer 99.9 3.9E-22 1.3E-26 202.4 27.5 283 149-466 75-404 (405)
222 1js3_A DDC;, DOPA decarboxylas 99.9 3.1E-21 1.1E-25 201.0 34.2 342 107-468 73-475 (486)
223 3ht4_A Aluminum resistance pro 99.9 1.4E-22 4.7E-27 207.2 23.4 244 146-421 65-344 (431)
224 3n75_A LDC, lysine decarboxyla 99.9 2.9E-22 9.9E-27 214.3 26.2 299 144-467 193-560 (715)
225 2fyf_A PSAT, phosphoserine ami 99.9 3E-22 1E-26 203.2 23.4 286 146-466 78-397 (398)
226 2zy4_A L-aspartate beta-decarb 99.9 3.5E-22 1.2E-26 210.4 23.8 334 102-472 106-527 (546)
227 3bwn_A AT1G70560, L-tryptophan 99.9 1.8E-22 6.2E-27 204.4 19.3 281 149-466 71-386 (391)
228 2hox_A ALLIIN lyase 1; cystein 99.9 1.6E-21 5.4E-26 199.7 18.9 325 99-465 55-423 (427)
229 1wyu_A Glycine dehydrogenase ( 99.9 8.2E-20 2.8E-24 187.7 26.8 289 141-464 103-437 (438)
230 4h51_A Aspartate aminotransfer 99.9 2.7E-19 9.1E-24 181.8 28.3 288 149-468 90-418 (420)
231 3e77_A Phosphoserine aminotran 99.8 1.8E-20 6.1E-25 187.4 16.6 328 103-468 11-376 (377)
232 3m5u_A Phosphoserine aminotran 99.8 1.5E-18 5.2E-23 172.7 24.3 320 100-466 4-359 (361)
233 3qm2_A Phosphoserine aminotran 99.8 6.8E-19 2.3E-23 176.9 17.5 317 112-467 34-385 (386)
234 3ou5_A Serine hydroxymethyltra 99.8 4.1E-17 1.4E-21 162.0 24.8 335 100-465 54-439 (490)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 6E-16 2E-20 154.4 25.2 294 159-474 129-468 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 5.8E-15 2E-19 149.3 28.6 301 146-468 98-444 (450)
237 2gjh_A Designed protein; oblig 50.5 35 0.0012 22.1 4.8 32 438-470 2-33 (62)
238 1zco_A 2-dehydro-3-deoxyphosph 49.7 95 0.0033 28.3 9.8 93 163-282 108-204 (262)
239 3nvt_A 3-deoxy-D-arabino-heptu 46.8 86 0.0029 30.4 9.5 59 216-282 261-323 (385)
240 1vr6_A Phospho-2-dehydro-3-deo 45.9 78 0.0027 30.3 8.8 59 216-282 225-287 (350)
241 1vs1_A 3-deoxy-7-phosphoheptul 45.4 69 0.0024 29.5 8.2 59 216-282 157-219 (276)
242 3mio_A DHBP synthase, 3,4-dihy 44.9 42 0.0014 29.4 6.1 36 240-275 158-194 (206)
243 1tks_A 3,4-dihydroxy-2-butanon 43.8 33 0.0011 30.1 5.3 35 240-274 159-193 (204)
244 1vhx_A Putative holliday junct 42.8 34 0.0012 28.4 5.1 53 216-280 43-101 (150)
245 1qys_A TOP7; alpha-beta, novel 38.1 64 0.0022 23.0 5.1 33 437-470 45-77 (106)
246 1snn_A DHBP synthase, 3,4-dihy 35.6 55 0.0019 29.1 5.5 35 240-275 178-212 (227)
247 1nxi_A Conserved hypothetical 35.2 1.7E+02 0.0059 23.4 8.7 98 372-471 16-115 (132)
248 3ghf_A Septum site-determining 34.6 1.7E+02 0.0057 23.0 7.8 62 207-274 17-78 (120)
249 1g57_A DHBP synthase, 3,4-dihy 34.6 73 0.0025 28.2 6.1 35 240-275 167-201 (217)
250 2q5c_A NTRC family transcripti 33.1 2.3E+02 0.0079 24.2 10.8 57 198-275 109-165 (196)
251 1iv0_A Hypothetical protein; r 33.1 75 0.0026 24.1 5.3 52 216-280 39-96 (98)
252 1nu0_A Hypothetical protein YQ 28.3 61 0.0021 26.4 4.3 53 216-280 41-99 (138)
253 2pju_A Propionate catabolism o 28.2 3.1E+02 0.011 24.2 11.3 86 168-274 90-176 (225)
254 4gqr_A Pancreatic alpha-amylas 26.8 26 0.00087 35.0 2.1 29 252-280 72-100 (496)
255 4fgs_A Probable dehydrogenase 25.4 1.5E+02 0.005 27.2 6.9 67 163-229 30-99 (273)
256 1qyd_A Pinoresinol-lariciresin 25.3 2E+02 0.0067 26.1 8.0 94 165-271 7-109 (313)
257 3kts_A Glycerol uptake operon 24.8 54 0.0019 28.4 3.5 43 215-275 17-59 (192)
258 1xp8_A RECA protein, recombina 23.2 4.5E+02 0.015 25.0 10.2 34 212-253 132-165 (366)
259 2qkf_A 3-deoxy-D-manno-octulos 23.2 2.8E+02 0.0095 25.4 8.3 91 163-280 107-200 (280)
260 1k4i_A 3,4-dihydroxy-2-butanon 23.2 1E+02 0.0036 27.4 5.0 35 240-275 167-212 (233)
261 3grp_A 3-oxoacyl-(acyl carrier 22.1 1.8E+02 0.006 26.1 6.8 66 163-228 28-96 (266)
262 3rwb_A TPLDH, pyridoxal 4-dehy 21.1 1.9E+02 0.0066 25.4 6.8 65 163-227 7-74 (247)
263 1g94_A Alpha-amylase; beta-alp 20.9 43 0.0015 33.2 2.4 28 253-280 61-88 (448)
264 1lwj_A 4-alpha-glucanotransfer 20.9 51 0.0017 32.5 2.9 27 254-280 67-93 (441)
265 4a1f_A DNAB helicase, replicat 20.7 5.3E+02 0.018 24.2 11.5 53 216-275 139-201 (338)
266 3gem_A Short chain dehydrogena 20.6 1.5E+02 0.0053 26.4 6.0 66 163-229 28-95 (260)
267 3pzt_A Endoglucanase; alpha/be 20.2 52 0.0018 31.1 2.7 22 258-280 106-127 (327)
268 3vup_A Beta-1,4-mannanase; TIM 20.1 55 0.0019 30.1 2.9 21 258-278 91-111 (351)
No 1
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=4.7e-48 Score=397.46 Aligned_cols=371 Identities=29% Similarity=0.505 Sum_probs=325.0
Q ss_pred cCCCcc-CCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPIS-SAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~-~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
+.+.+. +++|++++| | |+++|||++++|+|+.. +|.+.+++.+++.+++.+.++++...|..
T Consensus 46 ~~~~~~~~~~g~~~~~-~---------------g~~~id~~~~~~lg~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~G~~ 108 (427)
T 2w8t_A 46 FAIVMEQVKSPTEAVI-R---------------GKDTILLGTYNYMGMTF-DPDVIAAGKEALEKFGSGTCGSRMLNGTF 108 (427)
T ss_dssp TCCCCSEEEETTEEEE-T---------------TEEEEECSCCCTTCGGG-CHHHHHHHHHHHHHHCSCCCSCTTTTCCC
T ss_pred eeeeccccCCCceEee-C---------------CceEEEEECcccccCCC-CHHHHHHHHHHHHHhCCCCcccccccCCc
Confidence 345677 899999999 8 99999999999888764 58999999999999887777777778888
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
+.+.++++.|++++|.++++++++|++++..++.++.++|+.|+++.++|+++..+++..|++++.++++|+++|+++++
T Consensus 109 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~ 188 (427)
T 2w8t_A 109 HDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLG 188 (427)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999997
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIM 305 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~ 305 (489)
+. ++.++.+|+++++++++|.+.++++|+++|++||++||+||+|+.|.++++|++..+++++.+ ++|++
T Consensus 189 ~~---------~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~-~~di~ 258 (427)
T 2w8t_A 189 RL---------PKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEG-QIDFV 258 (427)
T ss_dssp TS---------CSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEE
T ss_pred hc---------cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCc-CCcEE
Confidence 52 011567888999999999999999999999999999999999998888888888777788864 67999
Q ss_pred EcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 306 MGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 306 ~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
++||||++|++|||+++++++++.+......+.++++++|+.++++.++|+.+. ..++++++++++.+++++.|
T Consensus 259 ~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~------~~~~~~~~~~~~~~~l~~~L 332 (427)
T 2w8t_A 259 VGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM------TAHEKRERLWSNARALHGGL 332 (427)
T ss_dssp EEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT------SCHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHH
Confidence 999999999889999999999988876554455666799999999999999872 34788999999999999999
Q ss_pred HhCCCeeeCCC-CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 386 QKMGFEVLGDN-DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 386 ~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+++|+++..+. .++++++.+.......++.+.|+++||.+.+..+|..|.+.+++||+++..+|++|+++++++|++++
T Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l 412 (427)
T 2w8t_A 333 KAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAG 412 (427)
T ss_dssp HHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHcCCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 99998886444 67888888865555778999999999999998888777777899999998899999999999999999
Q ss_pred HHhCCc
Q 046230 465 DLVGIK 470 (489)
Q Consensus 465 ~~~~~~ 470 (489)
+++...
T Consensus 413 ~~~~~~ 418 (427)
T 2w8t_A 413 RAVGVI 418 (427)
T ss_dssp HHHTCC
T ss_pred HHhCcc
Confidence 887654
No 2
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=3e-46 Score=381.70 Aligned_cols=380 Identities=19% Similarity=0.281 Sum_probs=326.6
Q ss_pred hHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHH
Q 046230 51 LEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKK 130 (489)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~ 130 (489)
+..++..++..... ....+..++.+.++++.+ |+++|||+|++|+|++.+ |.+.+++.+++++
T Consensus 26 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------g~~~ld~~s~~~l~~~~~-p~v~~a~~~~l~~ 88 (409)
T 3kki_A 26 LPDFIQNKIDHYIE-NYFDINKNGKHLVLGKQA---------------SPDDIILQSNDYLALANH-PLIKARLAKSLLE 88 (409)
T ss_dssp CCHHHHHHHHHHHH-HHTTTSTTSSCTTCCCCC---------------CTTSEECCCSCTTCCTTC-HHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHH-HHhhhccCCCeeeeCCCC---------------CCceEEeeccCccCCcCC-HHHHHHHHHHHHH
Confidence 33445554433222 223445577777777777 999999999999999864 8999999999999
Q ss_pred hCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEE
Q 046230 131 YSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIR 210 (489)
Q Consensus 131 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~ 210 (489)
|+.+..++....|..+...++++.++++++.+..+++++|++++..++.++.++||.|+++.++|+++..+++..|++++
T Consensus 89 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~ 168 (409)
T 3kki_A 89 EQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAH 168 (409)
T ss_dssp CCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEE
Confidence 88777777777788888899999999999999999999999999989999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
.++++|+++|++++.+. +.++|+++++++++|.+.++++|+++|++||++||+||+|+.|.+|++|.+
T Consensus 169 ~~~~~d~~~le~~l~~~------------~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~ 236 (409)
T 3kki_A 169 PFMHNNCDHLRMLIQRH------------GPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAG 236 (409)
T ss_dssp EECTTCHHHHHHHHHHH------------CSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCC
T ss_pred EecCCCHHHHHHHHHhc------------CCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 99999999999999863 346888899999999999999999999999999999999997779999888
Q ss_pred cccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
....+++. .++||+++||||++++.||++++++++++.+......+.++++.++..++++.++++.+. ..+++
T Consensus 237 ~~~~~~~~-~~~di~~~s~sK~~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~------~~~~~ 309 (409)
T 3kki_A 237 LLAELGLT-REVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIE------SADNR 309 (409)
T ss_dssp HHHHHTCG-GGCSEEEEESSSTTCSSCEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHH------HCHHH
T ss_pred chhhcCCC-CCCCEEEeecchhhCCCceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHh------cCHHH
Confidence 65677774 355899999999999878999999999998887766666777789999999999999874 23678
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCH
Q 046230 371 LARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTK 450 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~ 450 (489)
+++++++.+++++.|+++|+.+. ..++++++.+.......++.+.|+++||.+.+..+|..+.+.+++||+++..+|+
T Consensus 310 ~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~ 387 (409)
T 3kki_A 310 RQHLDRMARKLRIGLSQLGLTIR--SESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVND 387 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCC--CSSSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHHHcCCccC--CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCH
Confidence 88999999999999999998876 3678888888765556789999999999999988887778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 046230 451 EDLIKALEVISRVGDLVG 468 (489)
Q Consensus 451 edid~~l~~l~~~~~~~~ 468 (489)
+|+++++++|+++++...
T Consensus 388 e~i~~~~~~l~~~l~~~~ 405 (409)
T 3kki_A 388 EQIAKIIEVCSDAVNYGD 405 (409)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 999999999999988754
No 3
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=7e-45 Score=369.61 Aligned_cols=372 Identities=30% Similarity=0.547 Sum_probs=324.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
.+.++.+++|.++++ + |+++|||++++++|+. .+|.+.+++.+++.+++.+.+.++..+|..+
T Consensus 26 ~~~~~~~~~g~~v~~-~---------------g~~~id~~~~~~~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~ 88 (399)
T 3tqx_A 26 SERIITSPQNAEIKV-G---------------EKEVLNFCANNYLGLA-DHPALIKTAQTVVEQYGFGMASVRFICGTQT 88 (399)
T ss_dssp CCCCBCSCSSSEEEE-T---------------TEEEEECSSCCTTSCT-TCHHHHHHHHHHHHHHCSCCCSCCCCCCCBH
T ss_pred ccccccCCCCceEee-C---------------CeeEEEeeccCccccc-CCHHHHHHHHHHHHHhCCCCCCcCccccCch
Confidence 456788999999999 7 9999999999988874 4689999999999998877766777778888
Q ss_pred hHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHH
Q 046230 147 VHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLRE 226 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~ 226 (489)
...++++.++++++.++.+++++|++++..++.++.++|+.|+++.++|+++..+++..|++++.++++|+++|++.+++
T Consensus 89 ~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~ 168 (399)
T 3tqx_A 89 IHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKE 168 (399)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHh
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999987
Q ss_pred HHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEE
Q 046230 227 QIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMM 306 (489)
Q Consensus 227 ~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~ 306 (489)
...++ .++.+|+++++++++|.+.++++|.++|++||++||+||+|+.|.++.++.+..+.+++. .+.|+++
T Consensus 169 ~~~~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~di~~ 240 (399)
T 3tqx_A 169 ADEKG-------ARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVA-DRVDILT 240 (399)
T ss_dssp HHTTT-------CSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCT-TCCSEEE
T ss_pred hhccC-------CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC-CCCcEEE
Confidence 53221 256788899999999999999999999999999999999998777788887766777762 2348999
Q ss_pred cccccccC-CcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 307 GTFTKSFG-SCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 307 ~t~sK~~g-~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
+||||+++ ++|||+++++++++.+......+.++++.+++.++++.++++.+. ...++.+++++++.+++.+.|
T Consensus 241 ~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~l~~~L 315 (399)
T 3tqx_A 241 GTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-----TEGPQLRKQLQENSRYFRAGM 315 (399)
T ss_dssp EESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHH
T ss_pred ecchHhcccCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHH
Confidence 99999998 878999999999999987766555666799999999999999762 156889999999999999999
Q ss_pred HhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 386 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+++|+++. ...++++++.+.......++.+.|+++||.+.+..++..+.+.+++||+++..+|++++++++++|+++++
T Consensus 316 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 394 (399)
T 3tqx_A 316 EKLGFQLV-PGNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGK 394 (399)
T ss_dssp HHHTCCBC-CCSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCcC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 99998876 44577888877655567789999999999999887777677778999999989999999999999999998
Q ss_pred HhCC
Q 046230 466 LVGI 469 (489)
Q Consensus 466 ~~~~ 469 (489)
+++.
T Consensus 395 ~~~~ 398 (399)
T 3tqx_A 395 KLGA 398 (399)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 8763
No 4
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.9e-43 Score=357.40 Aligned_cols=373 Identities=29% Similarity=0.510 Sum_probs=312.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.++..+.+++|++++|.| |+++|||++++++|+. .+|.+.+++.+++.+++...+.++...|..
T Consensus 26 ~~~~~~~~~~g~~~~~~~---------------g~~~id~~~~~~~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~ 89 (401)
T 1fc4_A 26 KEERIITSAQQADITVAD---------------GSHVINFCANNYLGLA-NHPDLIAAAKAGMDSHGFGMASVRFICGTQ 89 (401)
T ss_dssp CCCCCBCSCSSSEEEBTT---------------SCEEEECCCSCTTSCT-TCHHHHHHHHHHHHHHCSCCCSCHHHHCCB
T ss_pred eeeeeeccCCCceEEeeC---------------CccEEEeeccCccccc-CCHHHHHHHHHHHHHhCCCCCCCCcccCCc
Confidence 467888999999999988 9999999888887753 358999999999998886554444444556
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
+...++++++|+++|.++.+++++|++++..++.++.++|+.|+++.++|+++..+++..|++++.++..|+++|++.++
T Consensus 90 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~ 169 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLK 169 (401)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHH
Confidence 77899999999999998889999999999888999999999999999999999999999999999999999999999997
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIM 305 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~ 305 (489)
+...++ .++.+|+++++++++|.+.++++|.++|++||++||+||+|+.|..+++|++..+.+++.+ +.|++
T Consensus 170 ~~~~~~-------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~ 241 (401)
T 1fc4_A 170 EAREAG-------ARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDII 241 (401)
T ss_dssp HHHHTT-------CSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEE
T ss_pred HhhccC-------CCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEE
Confidence 632211 1456788899999999999999999999999999999999976665667776555677764 56999
Q ss_pred Eccccccc-CCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 306 MGTFTKSF-GSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 306 ~~t~sK~~-g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
++||||++ |+.|||+++++++++.+......+.++.+.+++.++++.++|+.+. ..++.+++++++.+++.+.
T Consensus 242 ~~s~sK~~~~~~gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~l~~~ 315 (401)
T 1fc4_A 242 TGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE------AGSELRDRLWANARQFREQ 315 (401)
T ss_dssp EEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHH
T ss_pred EecchhhccCCCCEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHH
Confidence 99999999 7778999999999999887654343455689999999999999873 2467889999999999999
Q ss_pred HHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 385 L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
|+++|+.+. +..++++++.+.......++.+.|.++||.+.+..++..+.+.+++||+++..+|++++++++++|++++
T Consensus 316 L~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 394 (401)
T 1fc4_A 316 MSAAGFTLA-GADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIG 394 (401)
T ss_dssp HHHTTCCBC-CSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCccc-CCCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 999988876 4567788877754345678999999999999987666555556799999988899999999999999999
Q ss_pred HHhCC
Q 046230 465 DLVGI 469 (489)
Q Consensus 465 ~~~~~ 469 (489)
++++.
T Consensus 395 ~~~~~ 399 (401)
T 1fc4_A 395 KQLGV 399 (401)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 88764
No 5
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=1.6e-43 Score=363.24 Aligned_cols=356 Identities=17% Similarity=0.191 Sum_probs=280.4
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecc-cccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLG-SYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..+|..|.+++|+|+||+| |++||||. +.+...++|+||++++|+.+|+.++.+... ...
T Consensus 44 ~~~P~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~----~~~ 104 (456)
T 4atq_A 44 SGVPVYVEDADGGIIRDVD---------------GNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCF----MVT 104 (456)
T ss_dssp CSCSSCEEEEETTEEEETT---------------SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTT----TTS
T ss_pred CCCCCeEEeeecCEEEeCC---------------CCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCccc----Ccc
Confidence 4577888999999999999 99999994 457788898899999999999999754321 122
Q ss_pred cchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHhcCC----------
Q 046230 144 TLMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARGSGA---------- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~~g~---------- 207 (489)
.++...+|.++|+++.+. +.+++++||++||..+++ ...++..+|.....+|+.+...+..++.
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 356778899999999864 346667999999955554 4567888888899999988766655432
Q ss_pred ---eEEEecCC-----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 046230 208 ---TIRVFQHN-----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKY 269 (489)
Q Consensus 208 ---~~~~~~~~-----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~ 269 (489)
.+..+|.+ +.+.+++.++...... .+++.++||+||+++..|.+.| |++|+++|++|
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~ 259 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQI-----GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK 259 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHT-----CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhh-----cCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc
Confidence 23333332 3444555444322211 1357899999999999998754 99999999999
Q ss_pred CcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCH
Q 046230 270 KAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISP 345 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p 345 (489)
|++||+|||++ +|||+|.+ +++++|+.| ||+ |++|++|+ | |++++++++++.+....++.+|+ +||
T Consensus 260 gillI~DEV~t--G~GRtG~~~a~e~~gv~P---Div--t~gK~lgg-g~P~~av~~~~~i~~~~~~~~~~~Tf~--gnp 329 (456)
T 4atq_A 260 GIVFIADEVQS--GFCRTGEWFAVDHEGVVP---DII--TMAKGIAG-GLPLSAITGRADLLDAVHPGGLGGTYG--GNP 329 (456)
T ss_dssp TCEEEEECTTT--TTTTTSSSSGGGGTTCCC---SEE--EECGGGGT-TSSCEEEEEEHHHHTTSCTTSSCCSSS--SCH
T ss_pred CCceEeccccc--ccCCccccccccccCCCC---chh--hhhhcccC-cCCceeeEecHHHHhcccccCCCCCCC--CCh
Confidence 99999999999 99999998 889999999 999 99999986 5 99999999999888777776666 999
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--C-----CeeeCC--CCCCeEEEEeCCCC-------
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--G-----FEVLGD--NDSPVMPIMLYNPA------- 409 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g-----~~v~~~--~~~~~~~~~~~~~~------- 409 (489)
++|++++++|++| +.+++.+++++++++++++|+++ . .+++++ ..+.++.+.+..+.
T Consensus 330 la~aaala~L~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~ 402 (456)
T 4atq_A 330 VACAAALAAIDTM-------EQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAE 402 (456)
T ss_dssp HHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHH
T ss_pred HHHHhhHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHH
Confidence 9999999999999 56778999999999999999875 1 223322 23677777775432
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
....+.+.|+++|+++.+.+ ...+.|||+||+.+|+++||+++++|+++++.
T Consensus 403 ~~~~v~~~~~~~Gvl~~~~g-----~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 403 LTKAVAAACLKEGVIILTCG-----TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHHTTEECEEEC-----TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEecC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 24578999999999988533 23478999999999999999999999999875
No 6
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=3.1e-44 Score=366.99 Aligned_cols=342 Identities=13% Similarity=0.137 Sum_probs=272.4
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..||..|.+++|+|+||+| |++|||| ++++.+.++|+||+|++|+.+|+++..... +
T Consensus 67 ~~~P~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~-------~ 124 (454)
T 4ao9_A 67 APFPLTIARGEGAALWDAD---------------GHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLT-------G 124 (454)
T ss_dssp SSCCCEEEEEETTEEEETT---------------CCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCC-------S
T ss_pred CCCCccEEEeecCEEEECC---------------CCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCcc-------C
Confidence 3578889999999999999 9999999 556788899999999999999998743221 2
Q ss_pred cchhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhc-----CCeEEEecC
Q 046230 144 TLMVHNELEECVARFVGK-PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGS-----GATIRVFQH 214 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~-----g~~~~~~~~ 214 (489)
.+....+++++|++.++. +.+++++||++||..+++. .+++.++|.++..+|+.+....... ......+++
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356678999999998865 4555669999999666554 4577888888999998654322111 235677899
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
||++++++.+++. +.+.++||+||++++.|.+.| |++|+++|+|||++||+|||++ ||+|.+
T Consensus 205 nd~~~l~~~l~~~----------~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t----GR~G~~ 270 (454)
T 4ao9_A 205 NDAQTARAQIERH----------GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT----SRLAPH 270 (454)
T ss_dssp TCHHHHHHHHHHT----------GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG----GGGSTT
T ss_pred chHHHHHHHHhhc----------CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc----CCCccc
Confidence 9999999999874 246889999999999998877 9999999999999999999998 588887
Q ss_pred -cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC----CCcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 291 -VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC----PAHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 291 -~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~----~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
.++++|+.| ||+ |++|++|+ | |++++++++++.+.... ++.+| ++||++|++++++|+++
T Consensus 271 ~a~e~~gv~P---Di~--t~gK~lgg-G~Piga~~~~~ei~~~~~~~~~~~~h~~T~--~gnPla~AAala~L~~l---- 338 (454)
T 4ao9_A 271 GLANKLGIRS---DLT--TLGKYIGG-GMSFGAFGGRADVMALFDPRTGPLAHSGTF--NNNVMTMAAGYAGLTKL---- 338 (454)
T ss_dssp CHHHHHTCCC---SEE--EEEGGGGT-TSSCEEEEECHHHHGGGCTTTCSCCCCCTT--TTCHHHHHHHHHHHHHT----
T ss_pred cchhccCCCC---cEE--EeccccCC-CCcceeeeeHHHHHHHHhhccCCccccCCC--CCCHHHHHHHHHHHHHH----
Confidence 789999999 999 99999986 5 99999999999886533 23333 59999999999999998
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHHHHHhhCCceE
Q 046230 363 GSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFSRECLRQNVAV 425 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~Gi~v 425 (489)
..+++.+++++++++|+++|+++ ++.......+.++.+.+.... ....+...|+++||++
T Consensus 339 ---~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~ 415 (454)
T 4ao9_A 339 ---FTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYS 415 (454)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEEC
T ss_pred ---hccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEE
Confidence 55789999999999999999876 433222233667777664321 1236778899999988
Q ss_pred EeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 426 VTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 426 ~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.| . + ++.+++.||++|||+++++|++++.+.+
T Consensus 416 ~p-------~--~--~~~~s~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 416 SP-------R--G--FVVLSLPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp CT-------T--C--EEECCTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred cC-------C--C--CEEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence 62 1 1 3456778999999999999999998865
No 7
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=7.9e-42 Score=345.71 Aligned_cols=363 Identities=26% Similarity=0.456 Sum_probs=301.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.++..+.+++|.+++ .+ |+++|||+++.++|+.. +|.+.+++.+++++++.+.+.++..+|..
T Consensus 21 ~~~~~~~~~~g~~~~-~~---------------g~~~id~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~ 83 (384)
T 1bs0_A 21 RRRYPVAQGAGRWLV-AD---------------DRQYLNFSSNDYLGLSH-HPQIIRAWQQGAEQFGIGSGGSGHVSGYS 83 (384)
T ss_dssp CCCCCCSBCSSSEEE-ET---------------TEEEEECSCCCTTSGGG-CHHHHHHHHHHHHHHCSCCCSBTTTTCCC
T ss_pred cccccccCCCCceEE-EC---------------CceEEEeeccCccCCCC-CHHHHHHHHHHHHHhCCCCCCcCcccCCh
Confidence 455677899999999 56 89999998877667543 58999999999988776544444445667
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
+...++++.+++++|.++.+++++|++++..++.++.++|+.|+++.++|+++...++..|++++.++.+|+++|++.++
T Consensus 84 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~ 163 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLA 163 (384)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHH
Confidence 88899999999999998899999999999888899999999999999999999999999999999999999999999887
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIM 305 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~ 305 (489)
+. +..+++|+++++++++|.+.++++|.++|++||+++|+||+|+.|.++++|....+.++..+ |++
T Consensus 164 ~~----------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~---di~ 230 (384)
T 1bs0_A 164 SP----------CPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKP---ELL 230 (384)
T ss_dssp SC----------CSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCC---SEE
T ss_pred hc----------CCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCC---cEE
Confidence 52 11367888999999999999999999999999999999999987666666665445555444 899
Q ss_pred EcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 306 MGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 306 ~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
++||||++|++|||+++++++++.+......+.++++.+++.++++.++|+.+.. .+.++.+++++++.+++.+.|
T Consensus 231 ~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L 306 (384)
T 1bs0_A 231 VVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRS----DEGDARREKLAALITRFRAGV 306 (384)
T ss_dssp EEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeccchhhccCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhc----cccHHHHHHHHHHHHHHHHHH
Confidence 9999999998899999999999988775544444556899999999999998731 034678899999999999999
Q ss_pred HhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 386 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+++|+.+.+ ..++++++.+.......++.+.|.++||.+.+..++..+.+.+++||+++..+|++++++++++|+++
T Consensus 307 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 307 QDLPFTLAD-SCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp TTSSCEECS-CCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HhcCCcccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 999988764 45667667664334567899999999999998766655556689999999888999999999999864
No 8
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.2e-41 Score=346.25 Aligned_cols=371 Identities=30% Similarity=0.542 Sum_probs=305.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.++.++.+++|++++ .+ |+++|||+++++++++. ++.+.+++.++++++......++...|..
T Consensus 25 ~~~~~~~~~~g~~~~-~~---------------g~~~idl~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~ 87 (398)
T 3a2b_A 25 AYFRPIQSKQDTEVK-ID---------------GRRVLMFGSNSYLGLTT-DTRIIKAAQDALEKYGTGCAGSRFLNGTL 87 (398)
T ss_dssp CSSCCBCSCSSSEEE-ET---------------TEEEEECSCSCTTCGGG-CHHHHHHHHHHHHHHCSCCCSBTTTTCCC
T ss_pred cceeeecCCCCceEE-EC---------------CceEEEeecccccCCCC-CHHHHHHHHHHHHHcCCCCCCcCcccCCc
Confidence 567889999999999 77 89999998887767643 58999999999988765554445556778
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
++..++++.+++++|.++.+++++|++++..++.++.++|+.|+++.++|+++...++..|++++.++..|+++|+++++
T Consensus 88 ~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 167 (398)
T 3a2b_A 88 DIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLS 167 (398)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHH
Confidence 88999999999999998777788899999889999999999999999999999999999999999999999999999887
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIM 305 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~ 305 (489)
+.. +.++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.+.+++++....+.+++. ..+|++
T Consensus 168 ~~~---------~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~di~ 237 (398)
T 3a2b_A 168 RLP---------EDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLN-DDVDLI 237 (398)
T ss_dssp TSC---------SSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEE
T ss_pred hhc---------cCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCC-cCCeEE
Confidence 520 0145678889999999999999999999999999999999999776766665554555553 234899
Q ss_pred EcccccccCCcceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH
Q 046230 306 MGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385 (489)
Q Consensus 306 ~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (489)
++||||+++++|||+++++++++.+......+.++++.++..++++.++|+.+. +.++.+++++++.+++.+.|
T Consensus 238 ~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~------~~~~~~~~~~~~~~~l~~~L 311 (398)
T 3a2b_A 238 MGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQ------NEPEHIEKLWKNTDYAKAQL 311 (398)
T ss_dssp EEESSSTTCSSCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH------HCTHHHHHHHHHHHHHHHHH
T ss_pred EecccccccCCCcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHh------hCHHHHHHHHHHHHHHHHHH
Confidence 999999999878999999999998876543334445577877777888888752 34678899999999999999
Q ss_pred HhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 386 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+++|+++..+ .++++++.+.......++.+.|+++||.+.+...+..+.+.+++||+++..+|++++++++++|+++++
T Consensus 312 ~~~g~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 312 LDHGFDLGAT-ESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp HHTTCCBCSC-CSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcCCC-CCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 9998887654 477888777543456789999999999999866655444568999999877899999999999999999
Q ss_pred HhCCc
Q 046230 466 LVGIK 470 (489)
Q Consensus 466 ~~~~~ 470 (489)
+++.+
T Consensus 391 ~~~~~ 395 (398)
T 3a2b_A 391 QAEVE 395 (398)
T ss_dssp HCC--
T ss_pred HhCcc
Confidence 88764
No 9
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=3.9e-42 Score=354.24 Aligned_cols=351 Identities=14% Similarity=0.124 Sum_probs=273.2
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEec-ccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNL-GSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
..|.+|++++|+|+||+| |++|||+ ++.+...++|+||++++|+.+|++++..... .....
T Consensus 48 ~~P~vi~rg~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~---~~~~~ 109 (473)
T 4e3q_A 48 RGTVVVTHGEGPYIVDVN---------------GRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHA---FFGRM 109 (473)
T ss_dssp HCCEEEEEEETTEEEETT---------------CCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCC---CTTEE
T ss_pred CCCEEEEeeecCEEEeCC---------------CCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccc---ccccc
Confidence 357889999999999999 9999999 4557788898899999999999999653321 11124
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...+|.++|++..+. +.+++.+||++||..+++... ++..+|.....+|+.+...+..++..
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~ 189 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVF 189 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGG
T ss_pred CHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCcccccccccccccccc
Confidence 67778999999999875 466667999999976666532 33456778889999887777665421
Q ss_pred ------EEEecCC------------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 209 ------IRVFQHN------------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~~~------------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
...++.. ..+++++.+.+. .+...++||+||+++..|.+.| |+
T Consensus 190 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---------~~~~iAavi~EPiqg~gG~~~p~~~fl~ 260 (473)
T 4e3q_A 190 GLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE---------GADTIAGFFAEPVMGAGGVIPPAKGYFQ 260 (473)
T ss_dssp TCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred CCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh---------CCCceEEEEeCCccCCCCceeCCHHHHH
Confidence 1222211 123455555442 1247899999999999898754 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHh----
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKY---- 332 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~---- 332 (489)
+|+++|+|||++||+|||++ +|||+|++ .++++|+.| ||+ |++|++++.+ |++++++++++.+..
T Consensus 261 ~lr~lc~~~gilLI~DEV~t--GfGRtG~~fa~e~~gv~P---Di~--t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~ 333 (473)
T 4e3q_A 261 AILPILRKYDIPVISDEVIC--GFGRTGNTWGCVTYDFTP---DAI--ISSKNLTAGFFPMGAVILGPELSKRLETAIEA 333 (473)
T ss_dssp HHHHHHHHTTCCEEEECTTT--SSSTTSSSCHHHHTTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHhcccceEEeccCccc--cCCcccchhHHHhcCCCC---ChH--HhcccccCCCCCcccccccHHHHHHhcccccc
Confidence 99999999999999999999 99999998 889999999 999 9999998722 899999999988754
Q ss_pred ---hCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeC
Q 046230 333 ---TCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLY 406 (489)
Q Consensus 333 ---~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~ 406 (489)
..++++|+ +||++|++++++|+++ +.+++.+++++++++|+++|+++ ..+.++ ...+.++.+.+.
T Consensus 334 ~~~~~hg~T~~--Gnpla~Aaala~L~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~gielv 404 (473)
T 4e3q_A 334 IEEFPHGFTAS--GHPVGCAIALKAIDVV-------MNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAV 404 (473)
T ss_dssp HSCCCCCCTTT--TCHHHHHHHHHHHHHH-------HHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEEC
T ss_pred ccccccCCCCC--CCcchhhhhhhhhhhh-------ccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecceEEEEEEe
Confidence 23555555 9999999999999999 56788999999999999999986 221111 123566667653
Q ss_pred CC-----------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 407 NP-----------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 407 ~~-----------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+ .....+.+.|+++|+++.+. .+.+||+||+.+|++|+|+++++|+++++++
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~--------g~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 405 KDKASKTPFDGNLSVSERIANTCTDLGLICRPL--------GQSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp SBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE--------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCccccccccccHHHHHHHHHHHHHCCcEEEec--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 21 12457899999999999843 2689999999999999999999999998875
No 10
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=6.8e-42 Score=352.63 Aligned_cols=345 Identities=14% Similarity=0.150 Sum_probs=279.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
++..+.+++|+++||.| |++||||++ +++++++|.||++.+|+.++++++...+ +. ...
T Consensus 58 ~~~~~~~~~G~~~~d~~---------------g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~---~~--~~~ 117 (439)
T 2oat_A 58 LPVALERGKGIYLWDVE---------------GRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTS---RA--FYN 117 (439)
T ss_dssp CSCEEEEEEBTEEEETT---------------CCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEE
T ss_pred CCeeEEeeecCEEEECC---------------CCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCccc---Cc--cCC
Confidence 45556899999999999 999999966 6788999888999999999998865322 11 135
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc---------CCC-C-EEEEcCCCchHHHHHHHhcC--------
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM---------RKG-S-LIISDSLNHNSIVNGARGSG-------- 206 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~---------~~g-~-~Vl~~~~~h~~~~~~~~~~g-------- 206 (489)
+...+++++|+++++.+..+++++|++++..+++++. .+| + +|+.+..+|+.+...+...+
T Consensus 118 ~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 197 (439)
T 2oat_A 118 NVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGF 197 (439)
T ss_dssp SSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTS
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCC
Confidence 6789999999999998777888999999977777654 234 4 45555566777666666655
Q ss_pred ----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcc
Q 046230 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa 278 (489)
..+..++++|+++|+++++. .++++|++|++++++|.+. ++++|+++|++||++||+||+
T Consensus 198 ~p~~~~v~~~~~~d~~~le~~l~~------------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 265 (439)
T 2oat_A 198 GPFMPGFDIIPYNDLPALERALQD------------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEI 265 (439)
T ss_dssp CSCCTTEEEECSSCHHHHHHHTTS------------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCeEEeCCCCHHHHHHHhCC------------CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 56788899999999998852 2567889999999999876 699999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ ++|++|.+ ..+++++.| |++ ||||++++. +|++++++++++.+....+..+|+ +||+.++++.++
T Consensus 266 ~~--g~g~~g~~~~~~~~~~~~---Di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aaa~aa 336 (439)
T 2oat_A 266 QT--GLARTGRWLAVDYENVRP---DIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYG--GNPLGCRVAIAA 336 (439)
T ss_dssp TT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSST--TCHHHHHHHHHH
T ss_pred cc--CCccCCcchhHHHhCCCC---cEE--EecccccCCCCCeEEEEECHHHHhccCCCCcccCCC--cCHHHHHHHHHH
Confidence 98 79999987 558888877 888 999999763 499999999988876654555554 899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee--CCCCCCeEEEEeCCC--CcHHHHHHHHhhCCceEEeecC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL--GDNDSPVMPIMLYNP--AKIPAFSRECLRQNVAVVTVAF 430 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~--~~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~ 430 (489)
|+.+. .++..++++++++++++.|+++++++. ....+.++++.+... ....++.+.|+++||.+.+
T Consensus 337 l~~~~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~--- 406 (439)
T 2oat_A 337 LEVLE-------EENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKP--- 406 (439)
T ss_dssp HHHHH-------HTTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCB---
T ss_pred HHHHh-------hhhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEec---
Confidence 99883 346788999999999999998865432 123467888877654 3577899999999999884
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.+++||+++..+|++|+++++++|++++++
T Consensus 407 ----~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 407 ----THGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ----SSSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999998764
No 11
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=5.3e-41 Score=341.77 Aligned_cols=354 Identities=27% Similarity=0.448 Sum_probs=290.2
Q ss_pred ccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHh
Q 046230 98 KVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAI 177 (489)
Q Consensus 98 ~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~ 177 (489)
+|++++||+++++++++++ |.+.+++.+++++++.+..+++..++..+...++++++|++++.++.+++++|++++..+
T Consensus 44 ~g~~~i~~~~~~~~~~~~~-p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~ 122 (401)
T 2bwn_A 44 GKQDITVWCGNDYLGMGQH-PVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDAT 122 (401)
T ss_dssp CEEEEEECSCSCTTSGGGC-HHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHH
T ss_pred CCCcEEEeeCCCcccCCCC-HHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHH
Confidence 4899999999998898864 789999999999877655455555667788899999999999999999999999988777
Q ss_pred Hhhhc--CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC
Q 046230 178 LPVLM--RKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255 (489)
Q Consensus 178 ~~al~--~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~ 255 (489)
+.++. .+|+.|+++.++|+++...++..|++++.++++|+++|+++++.. .+.++.+|+++++++++|.
T Consensus 123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~---------~~~~~~~v~~~~~~nptG~ 193 (401)
T 2bwn_A 123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAAD---------DPAAPKLIAFESVYSMDGD 193 (401)
T ss_dssp HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHS---------CTTSCEEEEEESBCTTTCC
T ss_pred HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhh---------ccCCceEEEEecCcCCCCC
Confidence 66653 589999999999999999999999999999999999999998752 0124567889999999999
Q ss_pred CCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcceEEEeCHHHHHHHHhhCC
Q 046230 256 LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCP 335 (489)
Q Consensus 256 ~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~~~~l~~~~~ 335 (489)
+.|+++|+++|++||+++|+||+|+.|.+|++|.+.....++. .+.|++++||||+||++|||+++++++++.+.....
T Consensus 194 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~-~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~ 272 (401)
T 2bwn_A 194 FGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLM-HRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAP 272 (401)
T ss_dssp BCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCG-GGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCcc-ccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCc
Confidence 9999999999999999999999999888888887744555552 234899999999999879999999999998876554
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHH
Q 046230 336 AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 415 (489)
.+.++++.+++.++++.++++.+.. ...++.+++++++.+++.+.|+++|+.+..+ .++++++.+.......++.
T Consensus 273 ~~~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 347 (401)
T 2bwn_A 273 GFIFSTSLPPAIAAGAQASIAFLKT----AEGQKLRDAQQMHAKVLKMRLKALGMPIIDH-GSHIVPVVIGDPVHTKAVS 347 (401)
T ss_dssp HHHTSBCCCHHHHHHHHHHHHHHTS----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SSSCEEEECCCHHHHHHHH
T ss_pred CceecCCCCHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCeEEEEeCChHHHHHHH
Confidence 4445555778888889999998731 1236788999999999999999888877654 3567777765434566889
Q ss_pred HHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+ ++||.+.+..++..+.+.+++|++++..+|++|+++++++|+++++++
T Consensus 348 ~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 348 DMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 9997 679999887666555555799999998899999999999999887654
No 12
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=1.2e-41 Score=350.11 Aligned_cols=349 Identities=16% Similarity=0.184 Sum_probs=270.4
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccc-ccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGS-YNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
++..+.+++|+++||.| |++||||++ ++++.++|.||.+.+|+.++++++...+ +. ...
T Consensus 47 ~~~~~~~~~g~~~~d~~---------------G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~---~~--~~~ 106 (433)
T 1z7d_A 47 IPVVLKRAKGVFVYDVN---------------DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICS---RA--FFS 106 (433)
T ss_dssp EEEEEEEEEBTEEEETT---------------CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEE
T ss_pred CCceEEeeecCEEEECC---------------CCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCcc---CC--cCC
Confidence 34556899999999999 999999976 5778899888999999999998854321 11 246
Q ss_pred hhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc---------CCC-CEEEEcC-CCchHHHHHHHhcC--------
Q 046230 146 MVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM---------RKG-SLIISDS-LNHNSIVNGARGSG-------- 206 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~---------~~g-~~Vl~~~-~~h~~~~~~~~~~g-------- 206 (489)
+...+++++|+++++.+..+++++|++|+..+++++. .+| +.|++.. .+|+.+...+.+.+
T Consensus 107 ~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 186 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 186 (433)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccC
Confidence 7789999999999998888888999999977777643 244 6665555 55555555555544
Q ss_pred ----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcc
Q 046230 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~----~l~~i~~l~~~~~~~li~DEa 278 (489)
..+..++++|+++|+++++. .++++|+++++++++|.+. ++++|+++|++||++||+||+
T Consensus 187 ~p~~~~v~~~~~~d~~~le~~l~~------------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 254 (433)
T 1z7d_A 187 GPFAPQFSKVPYDDLEALEEELKD------------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEV 254 (433)
T ss_dssp -----CEEEECTTCHHHHHHHHTS------------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCeEEeCCCCHHHHHHHhCC------------CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 45677888999999998852 2567899999999999875 699999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ +||++|.+ ..+.+++.| |++ ||||++|+. +|++++++++++.+....+..+|+ +||+.++++.++
T Consensus 255 ~~--g~g~~g~~~~~~~~~~~~---di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aaa~aa 325 (433)
T 1z7d_A 255 QT--GLGRTGKLLCVHHYNVKP---DVI--LLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYG--GNPLAASICVEA 325 (433)
T ss_dssp TT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTT--TCHHHHHHHHHH
T ss_pred cc--CCCcCCcchhhHhcCCCC---CEE--EECccccCCCCCeEEEEECHHHHhhhccccccccCC--CCHHHHHHHHHH
Confidence 98 79999987 557888877 988 999999753 499999999988776554555554 899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeec
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVA 429 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~ 429 (489)
|+.+. .++..++++++++++++.|+++ +++.. ....+.++++.+... ....++.+.|+++||.+.+.
T Consensus 326 l~~~~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~- 397 (433)
T 1z7d_A 326 LNVLI-------NEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV- 397 (433)
T ss_dssp HHHHH-------HTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE-
T ss_pred HHHHH-------hccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC-
Confidence 99883 3467889999999999999886 55322 123467888877654 35778999999999998853
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
+.+++||++++.+|++|+++++++|+++++++..+
T Consensus 398 ------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 398 ------HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDER 432 (433)
T ss_dssp ------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred ------CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 35789999999999999999999999998876543
No 13
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=3.1e-41 Score=350.47 Aligned_cols=352 Identities=17% Similarity=0.185 Sum_probs=273.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.++||.| |++||||+++. ...++++||++++|+.++++++....+. ..+.
T Consensus 36 ~~p~~~~~~~G~~l~d~~---------------G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~---~~~~ 97 (472)
T 3hmu_A 36 EGTRVITRARGVWLNDSE---------------GEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTF---FKTT 97 (472)
T ss_dssp HCCEEEEEEEBTEEEETT---------------CCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSS---SSEE
T ss_pred CCCeeEEEeecCEEEECC---------------CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccc---cccC
Confidence 357789999999999999 99999997763 3456666899999999999986643321 1235
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC---------CCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR---------KGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~---------~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...+|+++|+++++. +.++++++|++++..+++++.. +.++|..+..+|+.+..+....+..
T Consensus 98 ~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~ 177 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQ 177 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccc
Confidence 77889999999999864 4666778999999877777653 4456667777787776666655431
Q ss_pred ------EEEec--C----CC-----------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHH
Q 046230 209 ------IRVFQ--H----NT-----------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPE 261 (489)
Q Consensus 209 ------~~~~~--~----~d-----------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~ 261 (489)
+..++ . ++ +++|++++++. .+.++++|++|++++++|.+.+ |++
T Consensus 178 ~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~---------~~~~~aavi~epv~~~gG~~~~~~~~l~~ 248 (472)
T 3hmu_A 178 SGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILEL---------GENRVAAFIAEPVQGAGGVIVAPDSYWPE 248 (472)
T ss_dssp TCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBSTTTCBCCCTTHHHH
T ss_pred cCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhc---------CCCCEEEEEEcCccCCCCcccCCHHHHHH
Confidence 22333 2 32 77888888652 1136789999999999999887 999
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh--CC
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT--CP 335 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~--~~ 335 (489)
|+++|++||++||+||||+ +||++|.. .++++++.| ||+ ||||++++.| |++++++++++.+... .+
T Consensus 249 l~~l~~~~gillI~DEv~~--gfgr~G~~~a~~~~~v~p---di~--t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~ 321 (472)
T 3hmu_A 249 IQRICDKYDILLIADEVIC--GFGRTGNWFGTQTMGIRP---HIM--TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNH 321 (472)
T ss_dssp HHHHHHHTTCEEEEECTTT--TTTTTSSSCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCC
T ss_pred HHHHHHHcCCEEEEEcccc--CCcccCccchhHHhCCCC---cee--eechhhhcCCcceEEEEECHHHHHhcccCCccc
Confidence 9999999999999999999 99999965 678899988 999 9999998744 9999999999999322 23
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH-HHHHHHHHHHHhC-CCee--eCCCCCCeEEEEeCCCC--
Q 046230 336 AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR-ENSNFFRSELQKM-GFEV--LGDNDSPVMPIMLYNPA-- 409 (489)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~-g~~v--~~~~~~~~~~~~~~~~~-- 409 (489)
+.+| ++||+++++++++|+.+ +.++++++++ ++++++++.|+++ .++. .....+.++.+.+....
T Consensus 322 ~~t~--~~np~a~aAa~aaL~~~-------~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~ 392 (472)
T 3hmu_A 322 GYTY--SGHPVAAAVALENLRIL-------EEENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKAS 392 (472)
T ss_dssp CCTT--TTCHHHHHHHHHHHHHH-------HHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSCGGG
T ss_pred cCCC--CCCHHHHHHHHHHHHHH-------HHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecCccc
Confidence 3334 49999999999999988 4467888999 9999999999876 2221 11234667777665321
Q ss_pred ----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 410 ----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 410 ----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
...++++.|+++||++.+. + +++||+|++.+|++++++++++|+++++++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 393 RAKFASEPGTIGYICRERCFANNLIMRHV-------G-DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp TCCBSSCTTHHHHHHHHHHHHTTBCCEEE-------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHCCcEEEec-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1567899999999999853 2 7899999999999999999999999987754
No 14
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=9.1e-41 Score=347.46 Aligned_cols=351 Identities=16% Similarity=0.144 Sum_probs=275.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
..|..+++++|.++||.| |++||||+|+. ...++++||+|++|+.++++++..++.. .+.
T Consensus 35 ~~p~~~~~~~G~~~~d~~---------------G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~----~~~ 95 (476)
T 3i5t_A 35 SAQPVLTHAEGIYVHTED---------------GRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW----YMA 95 (476)
T ss_dssp CCCCBEEEEEBTEEEETT---------------CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT----TCB
T ss_pred CCCeeEEEeecCEEEECC---------------CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccC----ccC
Confidence 457889999999999999 99999997763 3456666899999999999986543321 356
Q ss_pred chhHHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhhc---------CCCCEEEEcCCCchHHHHHHHhcCCe-----
Q 046230 145 LMVHNELEECVARFVG--KPAAIVFGMGYVTNSAILPVLM---------RKGSLIISDSLNHNSIVNGARGSGAT----- 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al~---------~~g~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (489)
++...+|+++|+++++ .+..+++++|++|+..+++++. ++..+|+.+..+|+.+..+....+..
T Consensus 96 ~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~ 175 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPN 175 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTT
T ss_pred CHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccc
Confidence 7888999999999985 4567777999999977777763 34456667777888777666655432
Q ss_pred -------EEEe--cC-----C-C--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHH
Q 046230 209 -------IRVF--QH-----N-T--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPE 261 (489)
Q Consensus 209 -------~~~~--~~-----~-d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~ 261 (489)
+..+ ++ + | +++||+++++. .+.++++|++|++++++|.+.+ |++
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~---------~~~~~aavi~ep~~~~~G~~~~~~~~L~~ 246 (476)
T 3i5t_A 176 FDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESL---------GPDTIAAFLAEPILASGGVIIPPAGYHAR 246 (476)
T ss_dssp SCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred cCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhc---------CCCCEEEEEECCccCCCCcccCCHHHHHH
Confidence 2222 23 2 1 77888888752 1136789999999999998766 999
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCc-ccc-ccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh--
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCE-LLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT-- 333 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~-~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~-- 333 (489)
|+++|++||++||+||||+ +||++|.. .++ ++++.| ||+ ||||++|+ | |++++++++++.+...
T Consensus 247 l~~lc~~~gillI~DEv~~--g~gr~G~~~~~~~~~~v~p---di~--t~sK~l~~-G~~plg~v~~~~~i~~~~~~~~~ 318 (476)
T 3i5t_A 247 FKAICEKHDILYISDEVVT--GFGRCGEWFASEKVFGVVP---DII--TFAKGVTS-GYVPLGGLAISEAVLARISGENA 318 (476)
T ss_dssp HHHHHHHTTCEEEEECTTT--TTTTTSSSCHHHHTTCCCC---SEE--EECGGGGT-TSSCCEEEEECHHHHHTTSGGGC
T ss_pred HHHHHHHcCCEEEEEeccc--CCccccCceeeecccCCCc---chh--hhhhhhcC-CCcCeEEEEECHHHHHHHhcCCc
Confidence 9999999999999999999 99999976 667 899988 998 99999986 5 8999999999988754
Q ss_pred -----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Cee--eCCCCCCeEEEEe
Q 046230 334 -----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEV--LGDNDSPVMPIML 405 (489)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v--~~~~~~~~~~~~~ 405 (489)
.++.+| ++||+++++++++|+.+ ..++++++++++++++++.|++++ ++. .....+.++++.+
T Consensus 319 ~~~~~~~~~t~--~~np~a~aAa~aaL~~~-------~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~ 389 (476)
T 3i5t_A 319 KGSWFTNGYTY--SNQPVACAAALANIELM-------EREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQC 389 (476)
T ss_dssp TTCEECCCCTT--TTCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEE
T ss_pred ccccccccCCC--CcCHHHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEE
Confidence 334444 49999999999999998 446789999999999999999762 221 1223466777766
Q ss_pred CCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 406 YNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 406 ~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.... ....+++.|+++||++.+. + +++||+|++.+|+++|++++++|+++++++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 390 LLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL-------G-DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp CCC-----CCHHHHHHHHHHHHHHHHTTEECEEE-------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccccccchhHHHHHHHHHHHHCCCEEEec-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5432 2567889999999999852 2 78999999999999999999999999877643
No 15
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.1e-40 Score=340.79 Aligned_cols=348 Identities=14% Similarity=0.140 Sum_probs=272.0
Q ss_pred CCCccCCCCCeEEEe-eccccCCcccccccCccc--eeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 68 GRPISSAPDAWFDVV-ERFSNDSNKTLKRTNKVN--RCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 68 ~~~i~~~~G~~i~~~-dr~~~~~~~~~~~~~~g~--~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
|.++.+++|+|+||. | |+ +||||+|+. ...++++||++.+|+.+++++++... ...+
T Consensus 55 ~~~~~~~~G~~l~d~~d---------------G~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~----~~~~ 115 (457)
T 3tfu_A 55 PVVAVAAHGAWLTLIRD---------------GQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVM----FGGL 115 (457)
T ss_dssp CEEEEEEEBTEEEEEET---------------TEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCC----SSSE
T ss_pred CceEEeeecCEEEEccC---------------CCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCcc----cccc
Confidence 567889999999999 9 99 999997653 34555568999999999999865432 1113
Q ss_pred cchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC---------CCCEEEEcCCCchHHHHHHHhcC------
Q 046230 144 TLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR---------KGSLIISDSLNHNSIVNGARGSG------ 206 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~---------~g~~Vl~~~~~h~~~~~~~~~~g------ 206 (489)
.++...+|+++|+++++. ++.+++++|++++..+++++.. +..+|..+..+|+.+.......+
T Consensus 116 ~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 195 (457)
T 3tfu_A 116 THEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMH 195 (457)
T ss_dssp ECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccc
Confidence 467889999999999963 5666778999999777776642 33455667777777666555522
Q ss_pred -------CeEEEecC-------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCCCCCC----hHHHHHHHH
Q 046230 207 -------ATIRVFQH-------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEGELCK----FPEIIAICK 267 (489)
Q Consensus 207 -------~~~~~~~~-------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G~~~~----l~~i~~l~~ 267 (489)
..+..++. +|+++|+++|++. +.++++|++|+ +++++|.+.+ +++|+++|+
T Consensus 196 ~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~----------~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~ 265 (457)
T 3tfu_A 196 SLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH----------AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICR 265 (457)
T ss_dssp ------CCCCEEECCCCSSCCHHHHHHHHHHHHHH----------GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHH
T ss_pred ccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC----------CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHH
Confidence 11222222 4788999988753 13678999999 9999998876 999999999
Q ss_pred HcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhh-----CCCcc
Q 046230 268 KYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYT-----CPAHL 338 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~-----~~~~~ 338 (489)
+||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++. .|++++++++++.+... .++.+
T Consensus 266 ~~gillI~DEv~~--g~gr~G~~~a~~~~~~~p---dii--t~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t 338 (457)
T 3tfu_A 266 RYEVLLIFDEIAT--GFGRTGALFAADHAGVSP---DIM--CVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPT 338 (457)
T ss_dssp HHTCEEEEECTTT--TTTTTSSSSTHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCT
T ss_pred HcCCEEEEEcCcc--CCccccchhHhHhcCCCc---eEE--EEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecC
Confidence 9999999999999 89999987 678899988 999 999999762 29999999999998632 23333
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Cee--eCCCCCCeEEEEeCCCCcHHHHH
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEV--LGDNDSPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v--~~~~~~~~~~~~~~~~~~~~~~~ 415 (489)
| ++||+++++++++|+.+ ..++.+++++++++++++.|+++. ++. .....+.++++.+..+....++.
T Consensus 339 ~--~~n~~a~aaa~aaL~~~-------~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~~~~~~~ 409 (457)
T 3tfu_A 339 F--MANPLACAVSVASVELL-------LGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPVDLAVAT 409 (457)
T ss_dssp T--TTCHHHHHHHHHHHHHH-------HTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCCCHHHHH
T ss_pred C--CcCHHHHHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcccHHHHH
Confidence 4 49999999999999988 335678899999999999998862 221 11234677888887766678999
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.|+++||++.+. .+++||+|++.+|++|+++++++|++++++++
T Consensus 410 ~~l~~~Gv~v~~~--------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 410 PAALDRGVWLRPF--------RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHHHHTTEECCCB--------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHCCeEEEec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999998832 26899999999999999999999999998765
No 16
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.1e-39 Score=338.31 Aligned_cols=354 Identities=14% Similarity=0.079 Sum_probs=269.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|.++.++.|.+++|.| |++||||+++ ....++++||.+.+|+.+++++...... ...+.
T Consensus 32 ~~p~~~~~~~G~~~~d~~---------------G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~---~~~~~ 93 (460)
T 3gju_A 32 SPTRIMAGGEGVTVWDNN---------------GRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHA---YVGHG 93 (460)
T ss_dssp SCCCCEEEEEBTEEEETT---------------CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCC---CTTCC
T ss_pred CCceEEEEeeccEEEECC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccccc---ccccC
Confidence 455889999999999999 9999999776 3345666689999999999998764332 22345
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC--------CCC-EEEEcCCCchHHHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR--------KGS-LIISDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~--------~g~-~Vl~~~~~h~~~~~~~~~~g~------ 207 (489)
++...+++++|+++++. ++.+++++|++++..+++++.. +++ +|+.+..+|+.+..+..+.+.
T Consensus 94 ~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 173 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNA 173 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTT
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccc
Confidence 77889999999999753 4566678899999888777652 334 455566677776666655442
Q ss_pred ------eEEEec------CCC------------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----h
Q 046230 208 ------TIRVFQ------HNT------------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----F 259 (489)
Q Consensus 208 ------~~~~~~------~~d------------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l 259 (489)
.+..++ ++| +++||+++++. .+.++++|++|++++++|.+.+ +
T Consensus 174 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~---------~~~~~aaii~ep~~~~~G~~~~~~~~l 244 (460)
T 3gju_A 174 FDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE---------GPETIAAFIGEPILGTGGIVPPPAGYW 244 (460)
T ss_dssp TTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBSTTTSBCCCTTHH
T ss_pred cCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc---------CCCCEEEEEECCccCCCCCccCCHHHH
Confidence 223332 244 68888888742 1136789999999999998766 9
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh--
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT-- 333 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~-- 333 (489)
++|+++|++||++||+||+|+ +||++|.. .++++++.| |++ ||||++++.+ |++++++++++.+...
T Consensus 245 ~~l~~l~~~~~~llI~DEv~~--g~gr~g~~~~~~~~~~~p---di~--t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~ 317 (460)
T 3gju_A 245 EKIQAVLKKYDVLLVADEVVT--GFGRLGTMFGSDHYGIKP---DLI--TIAKGLTSAYAPLSGVIVADRVWQVLVQGSD 317 (460)
T ss_dssp HHHHHHHHHTTCEEEEECTTT--TTTTTSSSCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecccc--CCCcccccchHhhcCCCC---Cee--eeehhhcCCCCCeEEEEECHHHHHHHhcccc
Confidence 999999999999999999999 89999965 678889988 888 9999998722 9999999999998632
Q ss_pred -----CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEE
Q 046230 334 -----CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIM 404 (489)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~ 404 (489)
.+..++ +.||+++++++++|+.+ ..++.+++++++.+++++.|.+. +........+.++++.
T Consensus 318 ~~~~~~~~~t~--~~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~ 388 (460)
T 3gju_A 318 KLGSLGHGWTY--SAHPICVAAGVANLELI-------DEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVE 388 (460)
T ss_dssp HHCSCSCCCTT--TTCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEE
T ss_pred cccccccCCCC--CCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEE
Confidence 333344 49999999999999988 34567788888888888877543 2222222346677776
Q ss_pred eCCCC-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 405 LYNPA-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 405 ~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.... ...++.+.|+++||++.+.+ ..+++||+|++.+|++++++++++|+++++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 389 FVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP------QGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp ECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS------SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EccCccccccccchHHHHHHHHHHHHHCCeEEecCC------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 65322 25678999999999998643 247899999999999999999999999988753
No 17
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=6e-40 Score=339.32 Aligned_cols=353 Identities=16% Similarity=0.169 Sum_probs=270.1
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..+|..+.++.|.|+||.| |++||||+++ ....++|+||++.+|+.+++++..... ...+
T Consensus 41 ~~~p~~~~~g~G~~v~d~~---------------g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~----~~~~ 101 (451)
T 3oks_A 41 TTMPVYAVRAGGGIVEDVD---------------GNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTC----FMVT 101 (451)
T ss_dssp CSCSSCEEEEETTEEEETT---------------SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCT----TTTS
T ss_pred CCCCceEEEeecCEEEECC---------------CCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccccc----CCcc
Confidence 3677888999999999999 9999999765 345666668999999999998753211 1224
Q ss_pred cchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHHhcCC----------
Q 046230 144 TLMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGARGSGA---------- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~~~g~---------- 207 (489)
.++...+++++|+++++. ++.+++++|++|+..+++.+. ++..+|..+..+|+.+.....+.+.
T Consensus 102 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 181 (451)
T 3oks_A 102 PYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGP 181 (451)
T ss_dssp CCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCS
T ss_pred CCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCC
Confidence 577889999999999863 456777999999977776553 4445556677777776666555432
Q ss_pred ---eEEEecCC------------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHH
Q 046230 208 ---TIRVFQHN------------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEI 262 (489)
Q Consensus 208 ---~~~~~~~~------------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i 262 (489)
.+..++.+ +++.+++.|++.+. +.++++|++|+++++.|.+.+ +++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~--------~~~~aavi~ep~~~~gG~~~~~~~~l~~l 253 (451)
T 3oks_A 182 FAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG--------ADNLAAVVIEPIQGEGGFIVPADGFLPTL 253 (451)
T ss_dssp CCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC--------GGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred CCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC--------CCCEEEEEEcCCcCCCCccCCCHHHHHHH
Confidence 34555544 13334444543221 246889999999999998877 9999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcc
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHL 338 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~ 338 (489)
+++|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++ | |++++++++++.+....+..+
T Consensus 254 ~~l~~~~g~~lI~DEv~~--g~g~~g~~~~~~~~~~~p---di~--t~sK~l~~-G~~iG~v~~~~~~~~~~~~~~~~~t 325 (451)
T 3oks_A 254 LDWCRKNDVVFIADEVQT--GFARTGAMFACEHEGIDP---DLI--VTAKGIAG-GLPLSAVTGRAEIMDSPHVSGLGGT 325 (451)
T ss_dssp HHHHHHTTCEEEEECTTT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGT-TSSCEEEEEEHHHHTCSCTTSBCCS
T ss_pred HHHHHHcCCEEEEEeccc--CCCccccchhhhhcCCCC---Cee--eehhhhhC-CcceEEEEECHHHHhhhcCCCcCCC
Confidence 999999999999999999 89999986 678889888 998 99999987 7 999999999988876555544
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC-------
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN------- 407 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~------- 407 (489)
++ .||+.+++++++|+.+ ..++.+++++++++++++.|+++ +........+.++++.+..
T Consensus 326 ~~--~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 396 (451)
T 3oks_A 326 YG--GNPIACAAALATIETI-------ESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPD 396 (451)
T ss_dssp SS--SCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTSCCBC
T ss_pred CC--CCHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCccCCCC
Confidence 44 9999999999999988 33567888888888888888765 2222223346777877743
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.....++.+.|+++||.+.+.+. ..+++||++++.+|++++++++++|++++++
T Consensus 397 ~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 397 ADLTKALCAGAHAAGVIVLSCGT-----YGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHTTEECEEECT-----TSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCcEEecCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 22356799999999999986431 2378999999999999999999999998763
No 18
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=6.9e-40 Score=339.01 Aligned_cols=358 Identities=14% Similarity=0.119 Sum_probs=271.2
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
..+|..+.++.|.++||.| |++||||+++ ....++|+||++.+|+.+++++..... ...+
T Consensus 44 ~~~p~~~~~~~G~~v~d~~---------------G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~----~~~~ 104 (453)
T 4ffc_A 44 STAPVYAVDADGGVIVDAD---------------GNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTC----FMVT 104 (453)
T ss_dssp CSCSSCEEEEETTEEEETT---------------SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT----TTTS
T ss_pred CCCCceEEeeecCEEEeCC---------------CCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccc----cCcC
Confidence 3577888999999999999 9999999765 335566668999999999999863321 1224
Q ss_pred cchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHHhcCC----------
Q 046230 144 TLMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGARGSGA---------- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~~~g~---------- 207 (489)
.++...+|+++|+++++. ++.+++++|++|+..+++.+. ++..+|..+..+|+.+.....+.+.
T Consensus 105 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 184 (453)
T 4ffc_A 105 PYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGP 184 (453)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCC
Confidence 578889999999999873 456667899999977776553 4555666777777777666665442
Q ss_pred ---eEEEecCC----C------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcC
Q 046230 208 ---TIRVFQHN----T------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYK 270 (489)
Q Consensus 208 ---~~~~~~~~----d------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~ 270 (489)
.+..++.+ | .+.++..++...... .+..+++|++|+++++.|.+.+ +++|+++|++||
T Consensus 185 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i-----~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~ 259 (453)
T 4ffc_A 185 FAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI-----GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENG 259 (453)
T ss_dssp CCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT-----CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHT
T ss_pred CCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc-----CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcC
Confidence 34444443 3 234433322211110 0146889999999999998876 999999999999
Q ss_pred cEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHH
Q 046230 271 AYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPP 346 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~ 346 (489)
++||+||+|+ +||++|.. ..+++++.| |++ ||||++++ | ||+++++++++.+....+..+++ .||+
T Consensus 260 ~llI~DEv~~--g~g~~g~~~a~~~~~~~p---di~--t~sK~~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~--~~~~ 329 (453)
T 4ffc_A 260 VVFIADEVQT--GFARTGAWFASEHEGIVP---DIV--TMAKGIAG-GMPLSAVTGRAELMDAVYAGGLGGTYG--GNPV 329 (453)
T ss_dssp CEEEEECTTT--TTTTTSSSSTHHHHTCCC---SEE--EECGGGGT-TSSCEEEEEEHHHHTTSCTTSSCCSSS--SCHH
T ss_pred CEEEEecCcc--CCCcccccchhhhcCCCc---chH--hhhhhhcC-CcCeEEEEECHHHHhhhcccCcCCCCC--cCHH
Confidence 9999999999 89999976 678889988 888 99999987 7 99999999999887655555554 9999
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC-------CCcHHHHH
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN-------PAKIPAFS 415 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~-------~~~~~~~~ 415 (489)
++++++++|+.+ ..++.+++++++++++++.|+++ +........+.++++.+.. .....++.
T Consensus 330 ~~aaa~aal~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 402 (453)
T 4ffc_A 330 TCAAAVAALGVM-------RELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIA 402 (453)
T ss_dssp HHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHH
Confidence 999999999988 34567888888888888888765 2222223346777777743 12356889
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.|+++||.+.+.+. ..+++||++++.+|++++++++++|+++++++.
T Consensus 403 ~~l~~~Gv~v~~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 403 AEALSQGVLILTCGT-----FGNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp HHHHHTTEECCEECT-----TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCEEecCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999986432 237899999999999999999999999998764
No 19
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.4e-39 Score=329.00 Aligned_cols=344 Identities=13% Similarity=0.164 Sum_probs=272.1
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccc-cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNY-LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~-lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.++.|.+++|.| |++||||+++.+ ..+++.||++.+++.++++++..... .+.
T Consensus 17 ~~~~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~ 76 (395)
T 3nx3_A 17 RFDIVLEKGQGVYLFDDK---------------AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSN-----LYY 76 (395)
T ss_dssp SCSCBEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCT-----TSB
T ss_pred CCCceEEeeeeeEEEECC---------------CCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcccccc-----ccC
Confidence 467788999999999998 999999987633 34455579999999999987554321 134
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhc-------CCCCEEEE-cCCCchHHHHHHHhcC----------
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLM-------RKGSLIIS-DSLNHNSIVNGARGSG---------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~-------~~g~~Vl~-~~~~h~~~~~~~~~~g---------- 206 (489)
.+...+++++++++++.++.+++++|++++..+++++. .+++.|++ +..+|+.........+
T Consensus 77 ~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 3nx3_A 77 NENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKP 156 (395)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCS
T ss_pred CHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCC
Confidence 67889999999999998788888999999977776653 23455555 5555555544444332
Q ss_pred --CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccc
Q 046230 207 --ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 207 --~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s 280 (489)
..+..++++|+++|++++++ ++++|+++++++++|.+.+ +++|.++|++||++||+||+|+
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~ 223 (395)
T 3nx3_A 157 LISGVKFAKYNDISSVEKLVNE-------------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC 223 (395)
T ss_dssp CCSCEEEECTTCHHHHHTTCCT-------------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCCcEEeCCCCHHHHHHhccC-------------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 56778899999999987753 5678889999999999877 9999999999999999999999
Q ss_pred cccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH-HHHHHhhCCCcccccCCCHHHHHHHHHHH
Q 046230 281 IGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL-IQYLKYTCPAHLYATSISPPAAEQIISAI 355 (489)
Q Consensus 281 ~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~-~~~l~~~~~~~~~~~~~~p~~~aa~~a~L 355 (489)
+||++|.. ..+.+++.| |++ ||||++++ | |++++++++ ++.+....+..+++ .||+.++++.++|
T Consensus 224 --~~g~~g~~~~~~~~~~~~---d~~--t~sK~~~~-G~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~aal 293 (395)
T 3nx3_A 224 --GMGRSGKFFAYEHAQILP---DIM--TSAKALGC-GLSVGAFVINQKVASNSLEAGDHGSTYG--GNPLVCAGVNAVF 293 (395)
T ss_dssp --TTTTTSSSSGGGGGTCCC---SEE--EECGGGTT-TSCCEEEEECHHHHHHHSCTTCCSSCBS--CCHHHHHHHHHHH
T ss_pred --CCCcCCcchhHHhcCCCC---CEE--EecccccC-CCceEEEEEchhhhhhhcCCcccCCCCC--CCHHHHHHHHHHH
Confidence 89998876 567888877 888 99999976 6 999999998 88887655554444 8999999999999
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
+.+ ..++..++++++.+++++.|+++ +........+.++++.+.......++.+.|+++||.+.+.
T Consensus 294 ~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--- 363 (395)
T 3nx3_A 294 EIF-------KEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVAKVIQKCQENALLLISC--- 363 (395)
T ss_dssp HHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEE---
T ss_pred HHH-------HhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcchHHHHHHHHHHCCCEEecC---
Confidence 987 33567778888888888887764 2221222346778888776657889999999999999853
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.+++||+|+..+|++++++++++|++++++
T Consensus 364 ----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 364 ----GENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp ----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999998764
No 20
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=3.6e-39 Score=334.29 Aligned_cols=352 Identities=17% Similarity=0.141 Sum_probs=265.3
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.+++|.| |++||||+++ ....++++||++.+|+.+++++.....+. ..+.
T Consensus 31 ~~p~~~~~~~G~~~~d~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~---~~~~ 92 (459)
T 4a6r_A 31 AGARVMTRGEGVYLWDSE---------------GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTF---FKTT 92 (459)
T ss_dssp ---CCEEEEEBTEEEETT---------------CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTT---SSSC
T ss_pred cCCeeEEEeecCEEEECC---------------CCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccc---cccC
Confidence 467889999999999999 9999999776 33455666899999999999986533221 2245
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC--------CCCEEE-EcCCCchHHHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR--------KGSLII-SDSLNHNSIVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~--------~g~~Vl-~~~~~h~~~~~~~~~~g~------ 207 (489)
++...+++++|+++++. +..++.++|++++..+++++.. +++.|+ .+..+|+.........+.
T Consensus 93 ~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 172 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQ 172 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC--
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccc
Confidence 78889999999999864 4566668899999888777754 345555 555566655555554332
Q ss_pred ------eEEEec--C----C---C--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 208 ------TIRVFQ--H----N---T--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 208 ------~~~~~~--~----~---d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
.+..++ . + | +++||+++.+. .+.++++|++|++++++|.+.+ |+
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~---------~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 243 (459)
T 4a6r_A 173 GDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEI---------GADKVAAFVGEPIQGAGGVIVPPATYWP 243 (459)
T ss_dssp -CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred cCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHc---------CCCCEEEEEECCccCCCCcccCCHHHHH
Confidence 222333 2 2 2 77888888652 1136789999999999998877 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh---
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT--- 333 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~--- 333 (489)
+|+++|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++.| |++++++++++.+...
T Consensus 244 ~l~~l~~~~~~llI~DEv~~--g~gr~G~~~~~~~~~~~p---di~--t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~ 316 (459)
T 4a6r_A 244 EIERICRKYDVLLVADEVIC--GFGRTGEWFGHQHFGFQP---DLF--TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDF 316 (459)
T ss_dssp HHHHHHHHTTCEEEEECTTT--TTTTTSSSSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCEEEEecccc--CCCcccccchHhhcCCCC---Cee--ehhhhhcCCCCCccceeeCHHHHHHhhcCCCc
Confidence 99999999999999999999 89999965 678889988 898 9999998744 9999999999998732
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH-HHHHHHHHHH-HhC-CCe--eeCCCCCCeEEEEeCCC
Q 046230 334 CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR-ENSNFFRSEL-QKM-GFE--VLGDNDSPVMPIMLYNP 408 (489)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~-~~~~~l~~~L-~~~-g~~--v~~~~~~~~~~~~~~~~ 408 (489)
.+..+| +.||+++++++++|+.+ ..++.+++++ ++++++++.| +.+ +++ ......+.++++.+...
T Consensus 317 ~~~~t~--~~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~ 387 (459)
T 4a6r_A 317 NHGFTY--SGHPVCAAVAHANVAAL-------RDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKN 387 (459)
T ss_dssp HHHHHH--CSCHHHHHHHHHHHHHH-------HHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSB
T ss_pred ccCCCC--CCCHHHHHHHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecC
Confidence 222334 49999999999999988 3456778888 8888888888 544 221 11223466667766432
Q ss_pred C-----------cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 A-----------KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ~-----------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
. ...++++.|+++||++.+. + +++||+|++.+|++++++++++|+++++++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 388 KAKRELFPDFGEIGTLCRDIFFRNNLIMRAC-------G-DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp TTTTBCCSSTTHHHHHHHHHHHHTTEECEEE-------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHCCeEEecC-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1567899999999999953 2 7899999999999999999999999988764
No 21
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=1e-38 Score=330.20 Aligned_cols=355 Identities=14% Similarity=0.133 Sum_probs=267.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.+++|.| |++||||+++ +...++++||++.+|+.++++++.. .. ..+.
T Consensus 30 ~~p~~~~~~~G~~v~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~----~~~~ 89 (452)
T 3n5m_A 30 NSTTVGAKAEGCWVEDIQ---------------GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FP----MSQS 89 (452)
T ss_dssp GGCCEEEEEEBTEEEETT---------------CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CC----TTSE
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cc----cccC
Confidence 456788999999999999 9999999776 2234444579999999999988654 11 2245
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEeCccHHHHHHhHhhhc-----C---CCCEEE-EcCCCchHHHHHHHhcCCe------
Q 046230 145 LMVHNELEECVARFVGKP-AAIVFGMGYVTNSAILPVLM-----R---KGSLII-SDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~~~~~~al~-----~---~g~~Vl-~~~~~h~~~~~~~~~~g~~------ 208 (489)
++...+++++|+++++.+ +.+++++|++++..+++++. . +++.|+ .+..+|+.........+..
T Consensus 90 ~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 169 (452)
T 3n5m_A 90 HEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQY 169 (452)
T ss_dssp EHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTT
T ss_pred CHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhcccc
Confidence 788899999999998754 45556889999988777766 3 455555 5555566655555544321
Q ss_pred ------EEEec--------CCC---------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hH
Q 046230 209 ------IRVFQ--------HNT---------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FP 260 (489)
Q Consensus 209 ------~~~~~--------~~d---------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~ 260 (489)
+..++ ++| +++||+++++.. +.++++|++|++ ++ +|.+.| ++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~---------~~~~~~vi~ep~~~n-~G~~~~~~~~l~ 239 (452)
T 3n5m_A 170 EPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL---------SETIAAFIMEPIITG-GGILMAPQDYMK 239 (452)
T ss_dssp CCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC---------GGGEEEEEECSSBTT-TTCBCCCTTHHH
T ss_pred CCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC---------CCCEEEEEEccccCC-CCeeeCCHHHHH
Confidence 22222 345 899999987310 136788999999 89 998876 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh---
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY--- 332 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~--- 332 (489)
+|+++|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++ | |++++++++++.+..
T Consensus 240 ~l~~l~~~~~~llI~DEv~~--g~g~~g~~~~~~~~~~~~---di~--t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~ 311 (452)
T 3n5m_A 240 AVHETCQKHGALLISDEVIC--GFGRTGKAFGFMNYDVKP---DII--TMAKGITS-AYLPLSATAVKREIYEAFKGKGE 311 (452)
T ss_dssp HHHHHHHHHTCEEEEECTTT--TTTTTSSSSGGGGTTCCC---SEE--EECGGGGT-TSSCCEEEEEEHHHHGGGCSSST
T ss_pred HHHHHHHHcCCEEEEecchh--CCCcccccchhhhcCCCC---CEE--eecccccC-CCcceEEEEECHHHHHHHhhccC
Confidence 99999999999999999999 89999986 678889888 898 89999987 7 999999999998853
Q ss_pred hC-CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe--eeCCCCCCeEEEEeCC
Q 046230 333 TC-PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE--VLGDNDSPVMPIMLYN 407 (489)
Q Consensus 333 ~~-~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~--v~~~~~~~~~~~~~~~ 407 (489)
.. ..+..+.+.||+++++++++|+.+ ..++.+++++++++++++.|+++ +++ ......+.++++.+..
T Consensus 312 ~~~~~~~~t~~~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~ 384 (452)
T 3n5m_A 312 YEFFRHINTFGGNPAACALALKNLEII-------ENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVN 384 (452)
T ss_dssp TCSCCCCCSSTTCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEE
T ss_pred CCCccccCCCCCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEec
Confidence 11 111233359999999999999988 44567888999999999998875 322 1122345566665532
Q ss_pred C---------CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 408 P---------AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 408 ~---------~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
. ....++++.|+++||.+.+.+++. +...+++||+|++.+|++++++++++|++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 385 DKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT-AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp ETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS-TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1 123578999999999999876553 455789999999999999999999999998764
No 22
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=3.4e-39 Score=333.49 Aligned_cols=347 Identities=14% Similarity=0.104 Sum_probs=258.6
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
.|..+.+++|.++||.| |++||||+++ ....++++||++.+|+.+++++..... ...+.+
T Consensus 26 ~p~~~~~g~G~~v~d~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~----~~~~~~ 86 (448)
T 3dod_A 26 NPLIIESGTGIKVKDIN---------------GKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHST----LLGMTN 86 (448)
T ss_dssp SCCEEEEEEBTEEEETT---------------SCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCC----CSSSEE
T ss_pred CCceEEEeeeCEEEECC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc----ccccCC
Confidence 46778899999999999 9999999764 334455558999999999998754322 123457
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC----C----CCEEEEcCCC-chHHHHHHHhcCCe------
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR----K----GSLIISDSLN-HNSIVNGARGSGAT------ 208 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~----~----g~~Vl~~~~~-h~~~~~~~~~~g~~------ 208 (489)
+...+++++++++++. +..+++++|++|+..+++++.. + ++.|++..+. |+.+..+..+.+..
T Consensus 87 ~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 166 (448)
T 3dod_A 87 VPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVY 166 (448)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccc
Confidence 8889999999999853 5667778999999887777653 3 3666655554 55554444443321
Q ss_pred ------EEEecCC----------------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC-CCCCCCCC----hHH
Q 046230 209 ------IRVFQHN----------------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY-SMEGELCK----FPE 261 (489)
Q Consensus 209 ------~~~~~~~----------------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~-s~~G~~~~----l~~ 261 (489)
+..++.+ |+++||++|+.. +.++++|++|+++ +++|.+.+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~a~vi~ep~~~~~~G~~~~~~~~l~~ 236 (448)
T 3dod_A 167 GPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEH----------HEEIAALSIESMVQGASGMIVMPEGYLAG 236 (448)
T ss_dssp ------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHH----------GGGEEEEEEESSEESTTTCEECCTTHHHH
T ss_pred cCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhC----------CCCEEEEEEeCcccCCCCeecCCHHHHHH
Confidence 2223333 378899988742 1367889999999 99998866 999
Q ss_pred HHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHh----
Q 046230 262 IIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKY---- 332 (489)
Q Consensus 262 i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~---- 332 (489)
|+++|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++ | |++++++++++.+..
T Consensus 237 l~~l~~~~~~~lI~DEv~~--g~g~~g~~~a~~~~~~~~---di~--t~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~ 308 (448)
T 3dod_A 237 VRELCTTYDVLMIVDEVAT--GFGRTGKMFACEHENVQP---DLM--AAGKGITG-GYLPIAVTFATEDIYKAFYDDYEN 308 (448)
T ss_dssp HHHHHHHTTCEEEEECTTT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGG
T ss_pred HHHHHHHhCCEEEEecccc--CCCcccchhhhhhcCCCC---CEE--EecccccC-CcCceEEEEECHHHHHHhhhcccc
Confidence 9999999999999999999 89999987 678899988 888 99999976 4 899999999998865
Q ss_pred ---hCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe--eeCCCCCCeEEEEeC
Q 046230 333 ---TCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE--VLGDNDSPVMPIMLY 406 (489)
Q Consensus 333 ---~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~--v~~~~~~~~~~~~~~ 406 (489)
..+..++ ++||+.+++++++|+.+ ..++++++++++.+++++.|+++ +++ ......+.++++.+.
T Consensus 309 ~~~~~~~~t~--~~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~ 379 (448)
T 3dod_A 309 LKTFFHGHSY--TGNQLGCAVALENLALF-------ESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELV 379 (448)
T ss_dssp CCCCCCCCTT--TTCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEEC
T ss_pred CCcccccCCC--CcCHHHHHHHHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEc
Confidence 3333333 48999999999999988 34567888888888888888774 222 112234667777775
Q ss_pred CCCc-----------HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 407 NPAK-----------IPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 407 ~~~~-----------~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.... ..++++.|+++||.+.+. .+++||+|++.+|+++|++++++|+++++++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 380 RSKETKEPYPADRRIGYKVSLKMRELGMLTRPL--------GDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp SBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE--------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhHHHHHHHHHHHHCCcEEecc--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4322 467999999999999743 2789999999999999999999999998875
No 23
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=3.4e-38 Score=324.21 Aligned_cols=356 Identities=13% Similarity=0.099 Sum_probs=256.7
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
..+..+.++.|.+++|.| |++||||+++ ....+++.||++.+|+.+++++...... ..+.
T Consensus 10 ~~~~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~ 70 (430)
T 3i4j_A 10 KPYPVAVRGEGVFLYDDA---------------GRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHG----SQFS 70 (430)
T ss_dssp SCCCEEEEEEBTEEEETT---------------SCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCT----TTCE
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccc----cccC
Confidence 356788899999999998 9999999775 2233444479999999999988643221 1245
Q ss_pred chhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc--------CCCCEEEEcCCCchH-HHHHHHhcCC------
Q 046230 145 LMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM--------RKGSLIISDSLNHNS-IVNGARGSGA------ 207 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~--------~~g~~Vl~~~~~h~~-~~~~~~~~g~------ 207 (489)
.+...+++++++++++. ++.++.++|++++..+++++. .+++.|++..+.|+. ........+.
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 150 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARREL 150 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC--------------------
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccc
Confidence 77889999999999864 455666788999977777764 335666665555544 3333333221
Q ss_pred --------eEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC-CCCCCCC----hHHHHHHH
Q 046230 208 --------TIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS-MEGELCK----FPEIIAIC 266 (489)
Q Consensus 208 --------~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s-~~G~~~~----l~~i~~l~ 266 (489)
.+..++++ |+++||+++++. .+.++++|+++++++ ++|.+.+ +++|+++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~ 221 (430)
T 3i4j_A 151 YTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE---------GPETVAAFMAEPVVGASDAALAPAPGYYERVRDIC 221 (430)
T ss_dssp -----CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH---------CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHH
T ss_pred cCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhc---------CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHH
Confidence 23334444 448999998753 013678899999999 9998877 99999999
Q ss_pred HHcCcEEEEEcccccccccCCCCc-ccccc-CCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhh----CCC
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRG-VCELL-EVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYT----CPA 336 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~-~~~~~-~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~----~~~ 336 (489)
++||++||+||+|+ +||++|.. ..+++ ++.| |++ ||||++++ | ||+++++++++.+... .+.
T Consensus 222 ~~~~~~li~DEv~~--~~~~~g~~~~~~~~~~~~~---di~--t~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~ 293 (430)
T 3i4j_A 222 DEAGIIFIADEVMS--GMGRCGSPLALSRWSGVTP---DIA--VLGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHG 293 (430)
T ss_dssp HHHTCEEEEECTTT--TTTTTSSSSGGGGTTTCCC---SEE--EECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCC
T ss_pred HHcCCEEEEechhh--CCCcccchhhhhhhcCCCC---cEE--EEcccccC-CccccEEEEECHHHHHHHhccCCccccc
Confidence 99999999999999 89999876 66778 8877 888 89999987 7 9999999999999864 333
Q ss_pred cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----C-CeeeCCCCCCeEEEEeCC----
Q 046230 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----G-FEVLGDNDSPVMPIMLYN---- 407 (489)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~v~~~~~~~~~~~~~~~---- 407 (489)
.++ +.||+++++++++|+.+ ..++.+++++++.+++++.|+++ . +... ...+.++++.+.+
T Consensus 294 ~t~--~~~~~~~aaa~aal~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~ 363 (430)
T 3i4j_A 294 FTY--AGHPVSVAAGLSVLDIV-------EREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGVVLGDLATG 363 (430)
T ss_dssp CTT--TTCHHHHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEC-----
T ss_pred CCC--CCCHHHHHHHHHHHHHH-------HcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEecccccc
Confidence 334 48999999999999987 33567788888888888888764 2 2222 2336677776643
Q ss_pred -----CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 408 -----PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 408 -----~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+....++.+.|+++||.+.+..++..+.+.+++||++++.+|++++++++++|+++++++
T Consensus 364 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 364 QAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 222467999999999999976555555567899999999999999999999999998764
No 24
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=8.7e-39 Score=327.68 Aligned_cols=342 Identities=15% Similarity=0.130 Sum_probs=268.7
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
++..+.+++|+++||.| |++||||+++ +++|+ .||.+.+++.++++++.... . ..
T Consensus 39 ~~~~~~~~~g~~~~d~~---------------g~~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~--~---~~ 96 (420)
T 2pb2_A 39 ADFIPVKGKGSRVWDQQ---------------GKEYIDFAGGIAVTALGH--CHPALVEALKSQGETLWHTS--N---VF 96 (420)
T ss_dssp CCSCEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCCCCC--T---TS
T ss_pred CCceEEeeecCEEEECC---------------CCEEEEccccccccccCC--CCHHHHHHHHHHHHhccccc--C---cc
Confidence 67788999999999998 9999999766 55666 46899999999998865432 1 12
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC-------CC-CEEEE-cCCCchHHHHHHHhcCCe------
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR-------KG-SLIIS-DSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~-------~g-~~Vl~-~~~~h~~~~~~~~~~g~~------ 208 (489)
..+...+++++|++++|.++.+++++|++++..+++++.. +| +.|++ +..+|+.+...+...|..
T Consensus 97 ~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~ 176 (420)
T 2pb2_A 97 TNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGF 176 (420)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTS
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccC
Confidence 4678899999999999987778889999999888877653 45 35555 445566666666666653
Q ss_pred ------EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC----CChHHHHHHHHHcCcEEEEEcc
Q 046230 209 ------IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL----CKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 209 ------~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~----~~l~~i~~l~~~~~~~li~DEa 278 (489)
+..++++|+++|++++.+ ++++|+++++++++|.+ .++++|+++|++||++||+||+
T Consensus 177 ~p~~~~~~~~~~~d~~~le~~i~~-------------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev 243 (420)
T 2pb2_A 177 GPKPADIIHVPFNDLHAVKAVMDD-------------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEV 243 (420)
T ss_dssp SSCCSCEEEECTTCHHHHHHHCCT-------------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCeEEecCCCHHHHHHHhcc-------------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 677888899999988753 46688889999877762 5699999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ ++|++|+. ..+.+++.| |++ ||||++++ | |++++++++++.+....+..+++ +||+.++++.++
T Consensus 244 ~~--g~~~~g~~~~~~~~~~~~---dii--t~sK~l~~-G~~iG~~~~~~~l~~~l~~~~~~~t~~--~~~~~~aa~~a~ 313 (420)
T 2pb2_A 244 QC--GMGRTGDLFAYMHYGVTP---DIL--TSAKALGG-GFPVSAMLTTQEIASAFHVGSHGSTYG--GNPLACAVAGAA 313 (420)
T ss_dssp TT--TTTTTSSSSHHHHHTCCC---SEE--EECGGGGT-TSCCEEEEECHHHHTTCC----CCEEC--CCHHHHHHHHHH
T ss_pred Cc--CcccCCcHHHHHhcCCCC---CeE--EecccccC-CCceEEEEEhHHHHHhhcCCCcCcccC--cCHHHHHHHHHH
Confidence 98 79999986 357788877 888 89999985 6 99999998887775533444444 899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCCC--cHHHHHHHHhhCCceEEee
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNPA--KIPAFSRECLRQNVAVVTV 428 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi~v~~~ 428 (489)
|+.+ ..++..++++++++++++.|+++ +++.. ....+.++++.+.... ...++.+.|+++||.+.+.
T Consensus 314 L~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~ 386 (420)
T 2pb2_A 314 FDII-------NTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA 386 (420)
T ss_dssp HHHH-------SSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES
T ss_pred HHHH-------HhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC
Confidence 9988 33678899999999999999876 33321 1234677777775432 4678999999999999853
Q ss_pred cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 429 AFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 429 ~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+++||+|+..+|++|+++++++|+++++++
T Consensus 387 -------~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 387 -------GADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp -------STTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 24789999999999999999999999988754
No 25
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=5.5e-39 Score=330.98 Aligned_cols=352 Identities=15% Similarity=0.093 Sum_probs=274.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccc-cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNY-LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~-lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++..+.++.|.+++|.| |++||||+++.+ ..+++.||.+.+++.++++++.... ...+.
T Consensus 24 ~~~~~~~~~~G~~v~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~----~~~~~ 84 (439)
T 3dxv_A 24 FFPLAISGGRGARLIEEN---------------GRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGAT----ILSAS 84 (439)
T ss_dssp SSCCEEEEEEBTEEEETT---------------SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSC----SSSSE
T ss_pred CCCceEEEeeeCEEEeCC---------------CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc----ccccC
Confidence 367788999999999998 999999987765 3344457999999999998863221 23456
Q ss_pred chhHHHHHHHHHHHhC--C-CCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhcCCeE---------
Q 046230 145 LMVHNELEECVARFVG--K-PAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGSGATI--------- 209 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g--~-~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~g~~~--------- 209 (489)
.+.+.+++++++++++ . ++.+++++|++++..++++ +.+++++|+.+..+|+.+..+..+.+...
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 164 (439)
T 3dxv_A 85 NAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADG 164 (439)
T ss_dssp EHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------C
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCC
Confidence 8889999999999984 4 4667778999999777776 45677788888888888877776655432
Q ss_pred -----EEecCC----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcC
Q 046230 210 -----RVFQHN----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYK 270 (489)
Q Consensus 210 -----~~~~~~----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~ 270 (489)
..++++ |+++|++++++. .+.++++|+++++++++|.+.+ +++|+++|++||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---------~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 235 (439)
T 3dxv_A 165 LILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV---------PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHG 235 (439)
T ss_dssp EEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS---------CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCcEEcCCCcccccccHHHHHHHHHHHHHhc---------CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 234554 588898888521 0146789999999999999988 999999999999
Q ss_pred cEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHH
Q 046230 271 AYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPP 346 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~ 346 (489)
++||+||+|+ +||++|.. ..+.+++.| |++ ||||++++ | ||+++++++++.+....+. .+. .+|+
T Consensus 236 ~~li~DE~~~--g~g~~g~~~~~~~~~~~~---di~--s~sK~~~~-G~riG~~~~~~~~~~~~~~~~~~--~t~-~~~~ 304 (439)
T 3dxv_A 236 ILVVCDEVKV--GLARSGRLHCFEHEGFVP---DIL--VLGKGLGG-GLPLSAVIAPAEILDCASAFAMQ--TLH-GNPI 304 (439)
T ss_dssp CEEEEECTTT--CTTTTSSSSGGGGTTCCC---SEE--EECGGGGT-TSCCEEEEEEHHHHTSCSSSSCC--TTT-TCHH
T ss_pred CEEEEecccc--CCCcCchhhHHHhcCCCC---CEE--EEcchhcC-CcceEEEEECHHHHhhhcCCCcC--CCc-ccHH
Confidence 9999999999 79999985 668888887 888 99999986 7 9999999998887655333 344 8999
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeC--------CCCcHHHH
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLY--------NPAKIPAF 414 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~--------~~~~~~~~ 414 (489)
.+++++++|+.+ ..++.+++++++.+++++.|+++ +........+.++++.+. ......++
T Consensus 305 ~~~aa~aal~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 377 (439)
T 3dxv_A 305 SAAAGLAVLETI-------DRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKL 377 (439)
T ss_dssp HHHHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHH
T ss_pred HHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHH
Confidence 999999999987 33567888888888888888775 322222334667777662 23346689
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.|+++||.+.+.+ ...+++||+++..+|++++++++++|+++++++.
T Consensus 378 ~~~l~~~Gv~v~~~~-----~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 378 IYRAYQLGLVVYYVG-----MNGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHTEECEEES-----TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHCCcEEeecC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999653 1247899999999999999999999999998764
No 26
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=9.7e-39 Score=328.66 Aligned_cols=343 Identities=15% Similarity=0.150 Sum_probs=261.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.++||.| |++||||+++. ...+++.||++.+|+.+++.+.. .. ...
T Consensus 36 ~~p~~~~~~~G~~~~d~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~------~~~ 93 (434)
T 3l44_A 36 GAPIAMERGKGAYFWDVD---------------GNKYIDYLAAYGPIITGHAHPHITKAITTAAENGV-LY------GTP 93 (434)
T ss_dssp SCCCCEEEEEBTEEEETT---------------CCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCS-CC------SSC
T ss_pred CCCceEEEeecCEEEECC---------------CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc-CC------CCC
Confidence 577889999999999999 99999997663 35566668999999999998832 11 124
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhhhcC--CCCEEEE-cCCCchHHHHHHHhcC--------------
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPVLMR--KGSLIIS-DSLNHNSIVNGARGSG-------------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~al~~--~g~~Vl~-~~~~h~~~~~~~~~~g-------------- 206 (489)
.+...+|+++++++++ .++.++.++|++++..+++++.. +++.|++ +..+|+.+.......|
T Consensus 94 ~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 173 (434)
T 3l44_A 94 TALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGV 173 (434)
T ss_dssp CHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCC
Confidence 6777899999999985 45566668899999777776543 4555555 4555554432222111
Q ss_pred -----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 207 -----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
..+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+||
T Consensus 174 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DE 243 (434)
T 3l44_A 174 PQSIAQEVITVPFNNVETLKEALDKW----------GHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDE 243 (434)
T ss_dssp CHHHHTTEEEECTTCHHHHHHHHHHH----------GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEEC
T ss_pred CCcCCCceEecCcccHHHHHHHHHhC----------CCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 256778889999999999863 136789999999999998887 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhC---CCcccccCCCHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTC---PAHLYATSISPPAAEQ 350 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~---~~~~~~~~~~p~~~aa 350 (489)
+|+ +| ++|.. ..+++++.| |++ ||||++|+ | |++++++++++.+.... +..+ .+.||+++++
T Consensus 244 v~~--g~-~~g~~~~~~~~~~~~---di~--t~sK~~~~-G~~iG~~~~~~~i~~~~~~~~~~~~~~t--~~~~~~a~aa 312 (434)
T 3l44_A 244 VIT--AF-RFMYGGAQDLLGVTP---DLT--ALGKVIGG-GLPIGAYGGKKEIMEQVAPLGPAYQAGT--MAGNPASMAS 312 (434)
T ss_dssp TTT--TT-TSSSSCHHHHHTCCC---SEE--EEEGGGGT-TSSCEEEEECHHHHTTBTTTSSBCCCCT--TTTCHHHHHH
T ss_pred ccc--ce-eccccHHHHHcCCCC---Cee--ehhhhhcC-CcCeeeEEEcHHHHHhhccCCCcccCCC--CCcCHHHHHH
Confidence 999 88 88876 578889988 888 99999985 6 99999999998876532 2223 3599999999
Q ss_pred HHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHH
Q 046230 351 IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPA 413 (489)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~ 413 (489)
++++|+.+ ..++.+++++++++++++.|+++ ++.......+.++++.+.... ...+
T Consensus 313 a~aal~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (434)
T 3l44_A 313 GIACLEVL-------QQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGK 385 (434)
T ss_dssp HHHHHHHH-------TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHH
T ss_pred HHHHHHHH-------HcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHH
Confidence 99999988 23567888888888888888774 443222334667777664221 2357
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+.|+++||.+.+. +.+.+|++ +.+|++|+++++++|+++++++
T Consensus 386 ~~~~l~~~Gv~v~~~-------~~~~~rl~--~~~t~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 386 FFKLMLQEGVNLAPS-------KYEAWFLT--TEHTKEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp HHHHHHHTTEECCSS-------TTCCEECC--TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeec-------CCCcEEEe--cccCHHHHHHHHHHHHHHHHHH
Confidence 889999999998843 23467874 5899999999999999998875
No 27
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=1.7e-38 Score=326.39 Aligned_cols=344 Identities=13% Similarity=0.112 Sum_probs=263.5
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.++||.| |++||||+++. ...+++.||++.+|+.+++++.... ...
T Consensus 34 ~~p~~~~~~~G~~~~d~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-------~~~ 91 (429)
T 3k28_A 34 MNPLFMERGKGSKVYDID---------------GNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF-------GAP 91 (429)
T ss_dssp CCCCCEEEEEBTEEEETT---------------CCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC-------SSC
T ss_pred CCCceEEEeecCEEEECC---------------CCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc-------CCC
Confidence 567889999999999999 99999997764 3556666899999999999884321 124
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhhhc---CCCCEEEEcCCCchHHHHHHHhcC--------------
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPVLM---RKGSLIISDSLNHNSIVNGARGSG-------------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~al~---~~g~~Vl~~~~~h~~~~~~~~~~g-------------- 206 (489)
++...+|+++++++++ .++.+++++|++++..+++.+. ++..+|+.+..+|+.+...+...|
T Consensus 92 ~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 171 (429)
T 3k28_A 92 TEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGV 171 (429)
T ss_dssp CHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCC
Confidence 6777899999999985 4566667889999977776654 344455556666665433322222
Q ss_pred -----CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 207 -----~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
..+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+||
T Consensus 172 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE 241 (429)
T 3k28_A 172 PEGVAKNTITVAYNDLESVKYAFEQF----------GDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDE 241 (429)
T ss_dssp CHHHHTTEEEEETTCHHHHHHHHHHH----------GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred CCcccCceeecCCCCHHHHHHHHHhC----------CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 256678889999999999863 136788999999999999888 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCC-cccccCCCHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPA-HLYATSISPPAAEQII 352 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~-~~~~~~~~p~~~aa~~ 352 (489)
+|+ +| ++|.. ..+++++.| |++ ||||++|+ | ||+++++++++.+...... ...+.+.||+++++++
T Consensus 242 v~~--g~-~~g~~~~~~~~~~~~---di~--t~sK~~~~-G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~ 312 (429)
T 3k28_A 242 VMT--GF-RVAYNCGQGYYGVTP---DLT--CLGKVIGG-GLPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGY 312 (429)
T ss_dssp TTT--TT-TSSTTHHHHHHTCCC---SEE--EECGGGGT-TSCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHH
T ss_pred ccc--cc-ccCcchHHHHhCCCC---cee--hhhhhhcC-CCCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHH
Confidence 998 88 88876 678889888 888 99999986 6 9999999999887653211 1123358999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFS 415 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~ 415 (489)
++|+.+ . ++.+++++++++++++.|+++ +........+.++++.+.... ...++.
T Consensus 313 aal~~~-------~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (429)
T 3k28_A 313 ETLVQL-------T-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYY 384 (429)
T ss_dssp HHHHTC-------C-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHH
T ss_pred HHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHH
Confidence 999875 3 778899999999999999875 332222234566666654321 236788
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||.+.+. +.+.+|+ ++.+|++|+++++++|+++++++
T Consensus 385 ~~l~~~Gv~v~~~-------~~~~~r~--~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 385 REMVEQGVFLPPS-------QFEGLFL--STVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHTTEECCSS-------TTSCBCC--CTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCeEEecC-------CCCCEEE--ECCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999998842 3356777 45899999999999999998764
No 28
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=5.2e-38 Score=318.65 Aligned_cols=342 Identities=18% Similarity=0.176 Sum_probs=274.1
Q ss_pred cccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 65 DCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 65 ~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+.++..+.++.|.+++|.| |++||||+++ +.+++++.||.+.+++.++++++..... .+
T Consensus 16 ~~~~~~~~~~~g~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~ 75 (392)
T 3ruy_A 16 HPLPIVISKAEGVWVEDPE---------------GNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSR-----AF 75 (392)
T ss_dssp CCCSCEECEEEBTEEECTT---------------CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT-----TS
T ss_pred CCCCceEEeeeeCEEEeCC---------------CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccccc-----cc
Confidence 4567778899999999998 9999999654 5566777789999999999988654331 13
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCC----------CCEEEEcCCCchHHHHHH-HhcCC-----
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRK----------GSLIISDSLNHNSIVNGA-RGSGA----- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~----------g~~Vl~~~~~h~~~~~~~-~~~g~----- 207 (489)
..+...++++++++++|.+..+++++|++++..+++++..+ ++.|++..+.|++...++ ...+.
T Consensus 76 ~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T 3ruy_A 76 HSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKR 155 (392)
T ss_dssp EETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhcc
Confidence 46778999999999999888888899999997777766533 678888888876544443 33322
Q ss_pred -------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 208 -------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
.+..++++|+++|+++++. ++.+|+++++++++|.+.| +++|+++|++||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~D 222 (392)
T 3ruy_A 156 GFGPMLPGIIVIPYGDLEALKAAITP-------------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVAD 222 (392)
T ss_dssp TCCSCCSSEEEECTTCHHHHHHHCCT-------------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCCCCCeeeCcccHHHHHHHhcc-------------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 3677889999999998863 5678888999999999998 999999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCC---cceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQII 352 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~ 352 (489)
|+|+ ++|++|.. ..+.+++.+ |++ ||||++++ .+|++++++++++.+.......+++ .+++.++++.
T Consensus 223 e~~~--~~~~~g~~~~~~~~~~~~---d~~--~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~ 293 (392)
T 3ruy_A 223 EIQT--GLGRTGKVFACDWDNVTP---DMY--ILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFG--GNPLACAVSI 293 (392)
T ss_dssp CTTT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSST--TCHHHHHHHH
T ss_pred echh--CCCccccchhhhccCCCC---CEE--EEchhhhCChhhhEEEEECHHHHhhhccCCcCCCCC--CCHHHHHHHH
Confidence 9998 89998886 556777777 888 99999976 2499999999988877665554554 8999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee--eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV--LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF 430 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 430 (489)
++|+.+ ..++.+++++++.+++++.|++++.+. .....+.++++.+.. ...++.+.|+++||.+.+
T Consensus 294 ~~l~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~l~~~gi~v~~--- 361 (392)
T 3ruy_A 294 AALEVL-------EEEKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNE--PARPYCEQLKAAGLLCKE--- 361 (392)
T ss_dssp HHHHHH-------HHTTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESS--CSHHHHHHHHTTTEECCC---
T ss_pred HHHHHH-------HhhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcc--hHHHHHHHHHHCCcEEec---
Confidence 999987 336788999999999999999885321 122236666666654 567899999999999883
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.+++||+++..+|++|+++++++|++++
T Consensus 362 ----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 362 ----THENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ----BTTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 235789999999999999999999999875
No 29
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=4.8e-39 Score=334.11 Aligned_cols=353 Identities=15% Similarity=0.104 Sum_probs=254.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccc-cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNY-LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~-lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.++.++.+++|+|+||.| |++||||+++.+ +.++|+||++++|+.+++.+.+....+.......
T Consensus 44 ~~~~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~ 108 (472)
T 1ohv_A 44 HFFCNYEESRGNYLVDVD---------------GNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPP 108 (472)
T ss_dssp CCCBCGGGCBBTEEEBTT---------------SCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCB
T ss_pred cCCceEEEEEcCEEEeCC---------------CCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccH
Confidence 345678999999999999 999999976644 6677778999999999876532111111111123
Q ss_pred chhHHHHHHHHHHHh--CCCCEEEeCccHHHHHHhHhhhc---------------------------C--CCCEEEEcCC
Q 046230 145 LMVHNELEECVARFV--GKPAAIVFGMGYVTNSAILPVLM---------------------------R--KGSLIISDSL 193 (489)
Q Consensus 145 ~~~~~~l~~~la~~~--g~~~~i~~~sG~~a~~~~~~al~---------------------------~--~g~~Vl~~~~ 193 (489)
.++.+++++.|+++. +.+++++++||++||..+++++. + +.++|..+..
T Consensus 109 ~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~ 188 (472)
T 1ohv_A 109 ENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGA 188 (472)
T ss_dssp TTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTC
T ss_pred HHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCC
Confidence 445555555566666 34577778999999977776652 1 2356667778
Q ss_pred CchHHHHHHHhcCCeE-------------EEec-----------CC------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 194 NHNSIVNGARGSGATI-------------RVFQ-----------HN------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 194 ~h~~~~~~~~~~g~~~-------------~~~~-----------~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+|+.+..++.++|... ..++ +| |+++|+++|++....+ .++++
T Consensus 189 yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-------~~~~~ 261 (472)
T 1ohv_A 189 FHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKK-------KTVAG 261 (472)
T ss_dssp CCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCEEE
T ss_pred cccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCC-------CCEEE
Confidence 8888777776665321 1221 22 5778888887531110 15678
Q ss_pred EEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCC--CCCccEEEccccccc-CC
Q 046230 244 VIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVD--TADVDIMMGTFTKSF-GS 315 (489)
Q Consensus 244 vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~--p~~~Di~~~t~sK~~-g~ 315 (489)
|++|++++++|.+.+ +++|+++|++||++||+||||+ ++|++|.+ ..+.+++. | |++ ||||++ |
T Consensus 262 vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~--g~g~~g~~~~~~~~gv~~~~---Di~--t~sK~~l~- 333 (472)
T 1ohv_A 262 IIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT--GGGSTGKFWAHEHWGLDDPA---DVM--TFSKKMMT- 333 (472)
T ss_dssp EEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT--TTTTTSSSSGGGGGCCSSCC---SEE--EECGGGSS-
T ss_pred EEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc--CCCCCCCchhccccCCCCCC---CEE--EEcccccc-
Confidence 999999999998877 9999999999999999999999 79999975 67788876 6 988 999994 5
Q ss_pred cceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe--
Q 046230 316 CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE-- 391 (489)
Q Consensus 316 ~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-- 391 (489)
||+++ ++++. .+....+..++ ++||+.+++++++|+.+. .++..+++++++++++++|+++ +++
T Consensus 334 -GG~~~-~~~~~-~~~~~~~~~T~--~~~~~~~aaa~aal~~~~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (472)
T 1ohv_A 334 -GGFFH-KEEFR-PNAPYRIFNTW--LGDPSKNLLLAEVINIIK-------REDLLSNAAHAGKVLLTGLLDLQARYPQF 401 (472)
T ss_dssp -EEEEE-CGGGS-CSSSSSSCCSS--SSCHHHHHHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred -CCccC-chhhc-ccccccccCcc--CccHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 68877 66552 12122222222 589999999999999883 3457899999999999999876 232
Q ss_pred ee-CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 392 VL-GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 392 v~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+. ....+.++++.+........++++|+++||.+.+. +.+++||++++.+|++||++++++|+++++++
T Consensus 402 v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 402 ISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGC-------GDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp CEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEE-------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 10 11236677765543334568999999999999853 34789999999999999999999999988653
No 30
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=8.3e-38 Score=321.26 Aligned_cols=344 Identities=15% Similarity=0.187 Sum_probs=259.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.++.|.++||.| |++||||+++ +...++|.||++.+|+.+++++... . ...
T Consensus 34 ~~p~~~~~~~G~~~~d~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~------~~~ 91 (429)
T 4e77_A 34 GIPLFIERADGAYLFDVD---------------GKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLS-F------GAP 91 (429)
T ss_dssp SCCCCEEEEEBTEEEETT---------------CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC-C------SSC
T ss_pred CCCceEEEeecCEEEECC---------------CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcc-c------CCC
Confidence 467888999999999999 9999999765 3456777789999999999987432 1 123
Q ss_pred chhHHHHHHHHHHHhC-CCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHhc---------------
Q 046230 145 LMVHNELEECVARFVG-KPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARGS--------------- 205 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~~--------------- 205 (489)
++...+++++++++++ .++.++.++|++++..+++. ..+++.+|..+..+|+.+...+...
T Consensus 92 ~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 171 (429)
T 4e77_A 92 TEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGV 171 (429)
T ss_dssp CHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCC
Confidence 6778899999999985 45566668899999776663 3466667777777777665222111
Q ss_pred ----CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 206 ----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 206 ----g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
...+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+||
T Consensus 172 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DE 241 (429)
T 4e77_A 172 PTDFAKHTLTCTYNDLASVRQAFEQY----------PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDE 241 (429)
T ss_dssp CGGGGTTEEEECTTCHHHHHHHHHHS----------TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEE
T ss_pred CCccCCceeecCCCCHHHHHHHHHhc----------CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1245677889999999999762 136788999999999999888 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccc-ccCCCHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLY-ATSISPPAAEQII 352 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~-~~~~~p~~~aa~~ 352 (489)
+|+ +| ++|.. ..+++++.| |++ ||||++++ | |++++++++++.+......... +.++||+.++++.
T Consensus 242 v~~--g~-r~g~~~~~~~~~~~p---di~--t~sK~~~~-G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~ 312 (429)
T 4e77_A 242 VMT--GF-RVALAGAQDYYHVIP---DLT--CLGKIIGG-GMPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGF 312 (429)
T ss_dssp TTT--BT-TTBTTCHHHHTTCCC---SEE--EEEGGGGT-TSCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHH
T ss_pred ccc--Cc-ccCcchHHHhcCCCC---Cee--eecccccC-CCCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHH
Confidence 999 88 77765 678889888 888 99999985 5 9999999999887653221112 2259999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC--------------cHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA--------------KIPAF 414 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~--------------~~~~~ 414 (489)
++|+.+ ..++.+++++++.+++++.|+++ ++.......+.++++.+.... ...++
T Consensus 313 aal~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (429)
T 4e77_A 313 ACLTEI-------SQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRF 385 (429)
T ss_dssp HHHHHH-------TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHH
T ss_pred HHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHH
Confidence 999988 23567788888888888888764 544333344677777765431 23678
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.|+++||.+.+.+ ..++| ++..+|++|+++++++|++++++
T Consensus 386 ~~~l~~~Gi~v~~~~-------~~~~~--~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 386 FHLMLEEGVYLAPSA-------FEAGF--MSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHTTEECCSST-------TSCEE--CCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCeEEeecC-------CCCEE--EeccCCHHHHHHHHHHHHHHHHh
Confidence 999999999988432 23455 46789999999999999998754
No 31
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=2.3e-37 Score=317.74 Aligned_cols=344 Identities=19% Similarity=0.174 Sum_probs=261.4
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..++++.|.++||.| |++||||+++ ....+++.||.+.+|+.+++++... .+ ..
T Consensus 33 ~~p~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~------~~ 90 (427)
T 3fq8_A 33 GQPIVFDRVKDAYAWDVD---------------GNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS-FG------AP 90 (427)
T ss_dssp SCCCCEEEEEBTEEEETT---------------SCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC-CS------SC
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC-cC------CC
Confidence 467889999999999999 9999999765 3355666689999999999987432 11 14
Q ss_pred chhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHhH---hhhcCCCCEEEEcCCCchHHHHHHHhc---------------
Q 046230 145 LMVHNELEECVARFVGK-PAAIVFGMGYVTNSAIL---PVLMRKGSLIISDSLNHNSIVNGARGS--------------- 205 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~~---~al~~~g~~Vl~~~~~h~~~~~~~~~~--------------- 205 (489)
.+...+++++++++++. ++.++.++|++++..++ .++.+++++|+.+..+|+.+.......
T Consensus 91 ~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 170 (427)
T 3fq8_A 91 CALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGV 170 (427)
T ss_dssp CHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSS
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCC
Confidence 67889999999999864 45566688999996666 444566667777777776443221111
Q ss_pred ----CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 046230 206 ----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDE 277 (489)
Q Consensus 206 ----g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DE 277 (489)
+..+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+||
T Consensus 171 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE 240 (427)
T 3fq8_A 171 PKKTTANTLTTPYNDLEAVKALFAEN----------PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDE 240 (427)
T ss_dssp CHHHHTTEEEEETTCHHHHHHHHHHS----------TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred CCcccCceeecCCCCHHHHHHHHHhC----------CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1236778899999999999762 236789999999999999988 9999999999999999999
Q ss_pred ccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCC-cccccCCCHHHHHHHH
Q 046230 278 AHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPA-HLYATSISPPAAEQII 352 (489)
Q Consensus 278 a~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~-~~~~~~~~p~~~aa~~ 352 (489)
+|+ +| ++|.. ..+++++.| |++ ||||++++ | |++++++++++.+...... +..+.++||+.++++.
T Consensus 241 v~~--g~-~~g~~~~~~~~~~~~---di~--t~sK~~~~-G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~ 311 (427)
T 3fq8_A 241 VIT--GF-RIAYGGVQEKFGVTP---DLT--TLGKIIGG-GLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGI 311 (427)
T ss_dssp TTT--BT-TTBTTHHHHHTTCCC---SEE--EECGGGGT-TSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHH
T ss_pred ccc--cc-ccCcchhhHhcCCCC---Chh--hhhhhhhC-CcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHH
Confidence 999 88 77765 667888888 887 99999985 6 9999999999888653211 1122248999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCC-------------cHHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPA-------------KIPAFS 415 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~ 415 (489)
++|+.+. .++.+++++++.+++++.|+++ ++.......+.++++.+.... ...++.
T Consensus 312 aal~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (427)
T 3fq8_A 312 KTLELLR-------QPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFH 384 (427)
T ss_dssp HHHHHHT-------STTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHH
T ss_pred HHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHH
Confidence 9999872 3567788888888888888764 333222334667777664321 135789
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.|+++||.+.+.+. . |++++..+|++|+++++++|++++++
T Consensus 385 ~~l~~~Gi~v~~~~~-------~--r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 385 RGMLEQGIYLAPSQF-------E--AGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHTTEECCSSTT-------S--CEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCCC-------C--CEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 999999999884321 2 56667899999999999999998865
No 32
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=5.5e-41 Score=345.32 Aligned_cols=340 Identities=16% Similarity=0.140 Sum_probs=265.6
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
.+|..+.+++|+|+||+| |++||||+++. .+.++|+||+|++|+.+++.+ +... ...
T Consensus 81 ~~p~~~~~~~G~~l~D~d---------------G~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~-~~~~------~~~ 138 (465)
T 2yky_A 81 PFPLVIAQGTGSRFQDVD---------------GHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV-GLNL------STQ 138 (465)
Confidence 357888999999999999 99999997664 466777789999999999987 3221 124
Q ss_pred chhHHHHHHHHHHHh-CCCCEEEeCccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHH---HhcCC--eEEEecCC
Q 046230 145 LMVHNELEECVARFV-GKPAAIVFGMGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGA---RGSGA--TIRVFQHN 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~---~~~g~--~~~~~~~~ 215 (489)
++...+|+++|++++ +.+.+++++||++|+..+++.+ .++.++|.++..+|+.+...+ ...|. .+..++++
T Consensus 139 ~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~ 218 (465)
T 2yky_A 139 TENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYN 218 (465)
Confidence 677789999999999 5677788899999997776654 456667777888888766444 11233 45667889
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc-
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG- 290 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~- 290 (489)
|+++|++++++. +.++++|++|++++++|.+.+ +++|+++|++||++||+||+|+ + ++|.+
T Consensus 219 d~~~l~~~l~~~----------~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~---r~g~~~ 284 (465)
T 2yky_A 219 DVEGTADLLKRH----------GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S---RLSGGG 284 (465)
Confidence 999999999752 125678889999999997766 9999999999999999999999 4 56655
Q ss_pred cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh-----CCCcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 291 VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT-----CPAHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 291 ~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~-----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
..+++++.| ||+ ||||++|+ | ||+++++++++.+... .+..++ ++||+++++++++|+++
T Consensus 285 a~~~~gv~p---Di~--t~sK~lg~-G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~--~~npla~aAa~aaL~~l---- 352 (465)
T 2yky_A 285 AQEMLGISA---DLT--TLGKYIGG-GMSFGAFGGRRDLMERFDPARDGAFAHAGTF--NNNILTMSAGHAALTQI---- 352 (465)
Confidence 678888888 888 99999997 7 9999999999988761 122333 59999999999999998
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhC--CCee--eCCCCCCeEEEEeCC-C------------CcHHHHHHHHhhCCceE
Q 046230 363 GSSRGAQKLARIRENSNFFRSELQKM--GFEV--LGDNDSPVMPIMLYN-P------------AKIPAFSRECLRQNVAV 425 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v--~~~~~~~~~~~~~~~-~------------~~~~~~~~~l~~~Gi~v 425 (489)
..+++.+++++++++++++|+++ ++.+ .....+.++++.+.. + .....+.+.|+++||++
T Consensus 353 ---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v 429 (465)
T 2yky_A 353 ---YTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYL 429 (465)
Confidence 34578899999999999999886 2222 233456677776653 1 12457899999999999
Q ss_pred EeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 426 VTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 426 ~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.+++ . +++.+|++||++++++|+++++++
T Consensus 430 ~p~~~~--------~---~s~~~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 430 APRGMY--------A---LSLEIADAGRDAFAEALADFIGEQ 460 (465)
Confidence 864432 1 567899999999999999988765
No 33
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=2e-37 Score=318.97 Aligned_cols=343 Identities=18% Similarity=0.165 Sum_probs=261.8
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+|..+.+++|+++||.| |++||||+++ +++|+ .||.+.+++.+++++ +... .+
T Consensus 38 ~p~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~-~~~~------~~ 93 (434)
T 2epj_A 38 YPFYVKRGEGAYLYTVD---------------GARIVDLVLAYGPLILGH--KHPRVLEAVEEALAR-GWLY------GA 93 (434)
T ss_dssp SCCCEEEEEBTEEEETT---------------CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHT-CSCC------SS
T ss_pred CCeeEEeeecCEEEECC---------------CCEEEEcccchhcccCCC--CCHHHHHHHHHHHHh-CCCC------CC
Confidence 47788899999999998 9999999765 34555 579999999999987 3221 12
Q ss_pred cchhHHHHHHHHHHHh-CCCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHH-------------hcC
Q 046230 144 TLMVHNELEECVARFV-GKPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGAR-------------GSG 206 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~-------------~~g 206 (489)
..+...+++++|++++ +.+..+++++|++++..++++ +.+++++|+.+..+|+.+..... ..|
T Consensus 94 ~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g 173 (434)
T 2epj_A 94 PGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAG 173 (434)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTT
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCC
Confidence 4677899999999999 566677779999999777776 67777777777666664332111 123
Q ss_pred ------CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 207 ------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 207 ------~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
..+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+|
T Consensus 174 ~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~D 243 (434)
T 2epj_A 174 VPEAVARLTLVTPYNDVEALERVFAEY----------GDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILD 243 (434)
T ss_dssp CCHHHHTTEEEEETTCHHHHHHHHHHH----------GGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcccCceEecCCCCHHHHHHHHHhC----------CCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 246778889999999999753 125778999999999999888 999999999999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhhCCCcc-cccCCCHHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYTCPAHL-YATSISPPAAEQII 352 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~~~~~~-~~~~~~p~~~aa~~ 352 (489)
|+|+ ++ ++|.. ..+++++.| |++ ||||++++ ++|++++++++++.+......+. .+.++||+.++++.
T Consensus 244 Ev~~--g~-~~g~~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~ 315 (434)
T 2epj_A 244 EVVT--GF-RLGLEGAQGYFNIEG---DII--VLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGL 315 (434)
T ss_dssp ETTT--TT-TSSTTHHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHH
T ss_pred cchh--ce-eCCcchhhHHhCCCC---Cee--eecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHH
Confidence 9999 67 56654 567788877 888 99999987 23999999999887765221111 12258999999999
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC-------------CcHHHHH
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP-------------AKIPAFS 415 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~-------------~~~~~~~ 415 (489)
++|+.+. .++..++++++++++++.|+++ ++.......+.++++.+... ....++.
T Consensus 316 a~l~~~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 2epj_A 316 ATLKALE-------EEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLH 388 (434)
T ss_dssp HHHHHHH-------HSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHH
T ss_pred HHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHH
Confidence 9999883 3467888999999999999875 55322233467888877641 1356799
Q ss_pred HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 416 RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 416 ~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.|+++||.+.+.+ ..++ .++..+|++|+++++++|+++++++
T Consensus 389 ~~l~~~Gv~v~~~~-------~~~~--~~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 389 EEMLRRGVFIAPSN-------LEAV--FTGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHTTEECCSST-------TSCE--ECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEeccC-------CCcE--EEeccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999988432 1234 4567899999999999999998765
No 34
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=7.7e-39 Score=350.34 Aligned_cols=352 Identities=11% Similarity=0.044 Sum_probs=259.9
Q ss_pred CCCccCCCCC--eEEEeeccccCCcccccccCccc----eeEeccc-ccccCCCCC-CccchHHHHHHHHHhCCCCCCcc
Q 046230 68 GRPISSAPDA--WFDVVERFSNDSNKTLKRTNKVN----RCLNLGS-YNYLGFAAS-DEYCTPRVIESLKKYSPSTCSSR 139 (489)
Q Consensus 68 ~~~i~~~~G~--~i~~~dr~~~~~~~~~~~~~~g~----~~id~~s-~~~lg~~~~-~~~v~~a~~~~l~~~~~~~~~~~ 139 (489)
+.+|++++|. |+||.| |+ +|||++| .+..+++|+ ||++++|+.+|++++++...
T Consensus 357 p~~i~~a~G~g~~l~D~d---------------G~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~--- 418 (831)
T 4a0g_A 357 VTVIDSRCGENFSIYKAS---------------DNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMF--- 418 (831)
T ss_dssp CEEEEEEETTEEEEEEHH---------------HHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CeEEEEeeccceEEEECC---------------CCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccc---
Confidence 4568888885 899988 88 9999955 466778888 89999999999999876531
Q ss_pred cCCCcchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhh-c-----------------CCCCEEEEcCCCchHH
Q 046230 140 VDGGTLMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVL-M-----------------RKGSLIISDSLNHNSI 198 (489)
Q Consensus 140 ~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al-~-----------------~~g~~Vl~~~~~h~~~ 198 (489)
...+++...+|+++|+++++. +.+++++||++||..+++.. . ++.++|..+..+|+.+
T Consensus 419 -~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T 497 (831)
T 4a0g_A 419 -PENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDT 497 (831)
T ss_dssp -TTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSS
T ss_pred -cccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCc
Confidence 112578889999999999983 56777799999996665553 1 2345777899999999
Q ss_pred HHHHHhcCCe---------------E---------------EEec------------CCCH------------------H
Q 046230 199 VNGARGSGAT---------------I---------------RVFQ------------HNTP------------------S 218 (489)
Q Consensus 199 ~~~~~~~g~~---------------~---------------~~~~------------~~d~------------------~ 218 (489)
..++.++|.. + ..+| ++++ +
T Consensus 498 ~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (831)
T 4a0g_A 498 LGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSA 577 (831)
T ss_dssp HHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHH
T ss_pred eeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHH
Confidence 9888877531 0 0111 1232 3
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cc
Q 046230 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VC 292 (489)
Q Consensus 219 ~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~ 292 (489)
+|++.|++.+.. ..+.+.++||+||+ ++..|.+.+ |++|+++|++||++||+|||++ +|||+|++ ++
T Consensus 578 ~le~~l~~~~~~-----~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~t--GfGRtG~~fa~ 650 (831)
T 4a0g_A 578 YLSKHLQEHSGV-----RQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFT--GFWRLGVETTT 650 (831)
T ss_dssp HHHHHC--------------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTT--TTTTTSBSSTH
T ss_pred HHHHHHHhhhhh-----cCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcc--ccccCCCchhh
Confidence 455555431100 01357899999997 888887754 9999999999999999999999 99999987 78
Q ss_pred cccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhC------CCcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 293 ELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTC------PAHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 293 ~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~------~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
+++|+.| ||+ ||+|++|+ | |++++++++++.+.... ++++ .++||++|++++++|++++.
T Consensus 651 e~~gv~P---Dii--tlsK~L~g-G~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T--~~g~Pla~Aaala~L~~i~~-- 720 (831)
T 4a0g_A 651 ELLGCKP---DIA--CFAKLLTG-GMVPLAVTLATDAVFDSFSGDSKLKALLHGHS--YSAHAMGCATAAKAIQWFKD-- 720 (831)
T ss_dssp HHHSSCC---SEE--EECGGGGT-TSSCCEEEEECHHHHHTTCSSCGGGSCCCCCT--TTTCHHHHHHHHHHHHHHHC--
T ss_pred HhcCCCC---cEE--EEeccccc-CccCcEEEEECHHHHHHHhcccccccceeecC--CcccHHHHHHHHHHHHHHHh--
Confidence 9999999 999 99999987 6 99999999999886532 3444 45999999999999999943
Q ss_pred CCchHHHHHHHHHHHHHH--------HHHHHHhCCCeeeCCCCCCeEEEEeCCC--------CcHHHHHHHHhhCCceEE
Q 046230 363 GSSRGAQKLARIRENSNF--------FRSELQKMGFEVLGDNDSPVMPIMLYNP--------AKIPAFSRECLRQNVAVV 426 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~--------l~~~L~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~Gi~v~ 426 (489)
+++++++.+++++ +.+.+++..........+.++.+.+... ....++.+.|+++||++.
T Consensus 721 -----~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~ 795 (831)
T 4a0g_A 721 -----PETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTR 795 (831)
T ss_dssp -----TTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECC
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEE
Confidence 2233444333332 3344555543222223467777776432 235578999999999998
Q ss_pred eecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 427 TVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 427 ~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+. .+++||++++.+|++||++++++|.+++++++
T Consensus 796 p~--------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 796 PL--------GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp CB--------TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred ec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 32 37999999999999999999999999987654
No 35
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=8.9e-37 Score=310.84 Aligned_cols=348 Identities=16% Similarity=0.165 Sum_probs=271.3
Q ss_pred hhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCc
Q 046230 62 RIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSS 138 (489)
Q Consensus 62 ~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~ 138 (489)
+..+.++..+.++.|.++|+.+ |++||||+++ +++|+ .||.+.+++.++++++.....
T Consensus 16 ~~~~~~~~~~~~~~g~~~~~~~---------------g~~~lD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~-- 76 (406)
T 4adb_A 16 PVYAPAPFIPVRGEGSRLWDQQ---------------GKEYIDFAGGIAVNALGH--AHPELREALNEQASKFWHTGN-- 76 (406)
T ss_dssp SSCCCCSSCEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCT--
T ss_pred hhcCCCCceEEeeccCEEEeCC---------------CCEEEECCCchhhcccCC--CCHHHHHHHHHHHHhcccccC--
Confidence 3445667888999999999998 9999999877 66776 368999999999987433221
Q ss_pred ccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC-------CC-CEEEEcCCC-chHHHHHHHhcC---
Q 046230 139 RVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR-------KG-SLIISDSLN-HNSIVNGARGSG--- 206 (489)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~-------~g-~~Vl~~~~~-h~~~~~~~~~~g--- 206 (489)
....+...+++++++++++.++.+++++|++++..+++++.. ++ +.|++..+. |+.........+
T Consensus 77 ---~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~ 153 (406)
T 4adb_A 77 ---GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPA 153 (406)
T ss_dssp ---TSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGG
T ss_pred ---CcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCcc
Confidence 123567899999999999988888889999999777777643 33 555555555 444444444443
Q ss_pred ---------CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC----CChHHHHHHHHHcCcEE
Q 046230 207 ---------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL----CKFPEIIAICKKYKAYI 273 (489)
Q Consensus 207 ---------~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~----~~l~~i~~l~~~~~~~l 273 (489)
..+..++++|+++|+++++. ++.+|+++|+++.+|.+ .++++|.++|++||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~l 220 (406)
T 4adb_A 154 YSQDFAPLPADIRHAAYNDINSASALIDD-------------STCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALL 220 (406)
T ss_dssp GTGGGCSCCSSEEEECTTCHHHHHTTCST-------------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEE
T ss_pred ccccCCCCCCCceEeCCCcHHHHHHHhcC-------------CeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 46778888999999987753 45677777776655533 46999999999999999
Q ss_pred EEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHH
Q 046230 274 YLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAE 349 (489)
Q Consensus 274 i~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~a 349 (489)
|+||+|+ +++++|.. ..+.+++.+ |++ ||||++++ | ||+++++++++.+.......+++ .+++.++
T Consensus 221 i~De~~~--~~~~~g~~~~~~~~~~~~---d~~--t~sK~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 290 (406)
T 4adb_A 221 IFDEVQT--GVGRTGELYAYMHYGVTP---DLL--TTAKALGG-GFPVGALLATEECARVMTVGTHGTTYG--GNPLASA 290 (406)
T ss_dssp EEECTTT--TTTTTSSSSHHHHHTCCC---SEE--EECGGGGT-TSCCEEEEECHHHHHTCCTTSSCCSST--TCHHHHH
T ss_pred EEecccc--CCCccchhHHHHhcCCCC---CEE--EechhhcC-CCCeEEEEEcHHHHhhhccCCcCCCCC--CCHHHHH
Confidence 9999999 79998876 456778777 888 89999984 6 99999999998887665554454 8999999
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC----eeeCCCCCCeEEEEeCCCC--cHHHHHHHHhhCCc
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGF----EVLGDNDSPVMPIMLYNPA--KIPAFSRECLRQNV 423 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~----~v~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi 423 (489)
++.++|+.+ ..++.+++++++.+++++.|++++. .......+.++++.+.... ...++.+.|+++||
T Consensus 291 a~~~~l~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi 363 (406)
T 4adb_A 291 VAGKVLELI-------NTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGV 363 (406)
T ss_dssp HHHHHHHHH-------SSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTE
T ss_pred HHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCc
Confidence 999999987 3378889999999999999987621 1111223667777776543 57889999999999
Q ss_pred eEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 424 AVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 424 ~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+.+ .+.+++||+++..+|++++++++++|+++++++.
T Consensus 364 ~v~~-------~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 364 MVLI-------AGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp ECEE-------SSTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEee-------cCCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9984 2357899999999999999999999999998764
No 36
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=7.4e-37 Score=315.99 Aligned_cols=347 Identities=13% Similarity=0.132 Sum_probs=258.7
Q ss_pred cccCCCc--cCCCCCeEEE-eeccccCCcccccccCccceeEecccccc-cCCCCCCccch-H-HHHH---HHHHhCCCC
Q 046230 65 DCFGRPI--SSAPDAWFDV-VERFSNDSNKTLKRTNKVNRCLNLGSYNY-LGFAASDEYCT-P-RVIE---SLKKYSPST 135 (489)
Q Consensus 65 ~~~~~~i--~~~~G~~i~~-~dr~~~~~~~~~~~~~~g~~~id~~s~~~-lg~~~~~~~v~-~-a~~~---~l~~~~~~~ 135 (489)
..++.++ .++.|+++|| .| |++||||+++.+ ..++++||.+. + |+.+ ++++.....
T Consensus 31 ~~~~~~~~~~~~~g~~~~d~~~---------------g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~ 95 (449)
T 2cjg_A 31 DGLDIVLDLTRSGGSYLVDAIT---------------GRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSN 95 (449)
T ss_dssp CSCSSCBCTTTCBBTEEEBTTT---------------CCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCT
T ss_pred cCCCeeEEEeeeeeCEEEECCC---------------CcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4556665 5999999999 88 999999966533 56666689999 9 9999 887753211
Q ss_pred CCcccCCCcchhHHHHHHHHHHHhC---CCCEEEeCccHHHHHHhHhhh---cC-----------CCCEEEEcCC-CchH
Q 046230 136 CSSRVDGGTLMVHNELEECVARFVG---KPAAIVFGMGYVTNSAILPVL---MR-----------KGSLIISDSL-NHNS 197 (489)
Q Consensus 136 ~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~al---~~-----------~g~~Vl~~~~-~h~~ 197 (489)
+ .+.++...+++++|+++++ .++.+++++|++++..+++++ .+ +++.|++..+ +|+.
T Consensus 96 --~---~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~ 170 (449)
T 2cjg_A 96 --S---DVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGR 170 (449)
T ss_dssp --T---TCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCS
T ss_pred --c---ccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCc
Confidence 1 1346778999999999985 345666688999997666543 22 1666666554 5554
Q ss_pred HHHHHHhcC-------------CeEEEecCCC--HHH-------------HHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 198 IVNGARGSG-------------ATIRVFQHNT--PSH-------------LEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 198 ~~~~~~~~g-------------~~~~~~~~~d--~~~-------------Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
+...+...+ ..+..++++| .+. |++++++. +.++++|+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~----------~~~~~~vi~ep~ 240 (449)
T 2cjg_A 171 SGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR----------PHDIACFVAEPI 240 (449)
T ss_dssp STTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS----------TTTEEEEEECSE
T ss_pred ccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc----------CCceEEEEEeCc
Confidence 443333333 2566677777 443 77777541 135678999999
Q ss_pred CCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcceEEEeCH
Q 046230 250 YSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSK 324 (489)
Q Consensus 250 ~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~ 324 (489)
++++|.+.+ +++|+++|++||++||+||+|+ ++|++|.. ..+++++.| |++ ||||+| . -|++++++
T Consensus 241 ~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~--g~g~~g~~~~~~~~~~~~---di~--t~sK~l-~-iG~~~~~~ 311 (449)
T 2cjg_A 241 QGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT--GCGLTGTAWAYQQLDVAP---DIV--AFGKKT-Q-VCGVMAGR 311 (449)
T ss_dssp ETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT--TTTTTSSSSTHHHHTCCC---SEE--EECGGG-S-SEEEEECG
T ss_pred CCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc--CCCccCcceeecccCCCc---eEE--EecCcc-c-EEEEEECH
Confidence 999998777 9999999999999999999999 89999876 557788877 888 999999 4 57788888
Q ss_pred HHHHHHH-----hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----C--Ceee
Q 046230 325 ELIQYLK-----YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----G--FEVL 393 (489)
Q Consensus 325 ~~~~~l~-----~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g--~~v~ 393 (489)
++++.+. ...+.. +.++||+.++++.++|+.+ ..++..++++++++++++.|+++ . +...
T Consensus 312 ~~~~~l~~~~~~~~~~~~--t~~~n~~~~~aa~aal~~~-------~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~ 382 (449)
T 2cjg_A 312 RVDEVADNVFAVPSRLNS--TWGGNLTDMVRARRILEVI-------EAEGLFERAVQHGKYLRARLDELAADFPAVVLDP 382 (449)
T ss_dssp GGGGSTTCTTTSTTSSCC--SSSSCHHHHHHHHHHHHHH-------HHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE
T ss_pred HHhhhhhhcccCCccccc--CCCCCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Confidence 8887632 122223 3358999999999999988 33568889999999999999875 2 2222
Q ss_pred CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 394 GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...+.++++.+.......++.+.|+++||.+.+. +.+++||+|++.+|+++|++++++|+++++++
T Consensus 383 -~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 383 -RGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPA-------GADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp -EEETTEEEEECSSHHHHHHHHHHHHHTTEECEEE-------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -eeccEEEEEEECChHHHHHHHHHHHHCCeEEecC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2346677776654334568999999999999853 24789999999999999999999999998754
No 37
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=3.8e-36 Score=309.16 Aligned_cols=354 Identities=16% Similarity=0.131 Sum_probs=261.0
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
++..+.++.|+++||.| |++||||+++ +...+++.||++.+++.+++++++... ..+..
T Consensus 25 ~~~~~~~~~g~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-----~~~~~ 84 (433)
T 1zod_A 25 EPMIIERAKGSFVYDAD---------------GRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLF-----SEMLS 84 (433)
T ss_dssp CSSCCCEEEBTEEECTT---------------CCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC-----TTCCC
T ss_pred CCceEEEeecCEEEeCC---------------CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccc-----cccCC
Confidence 46678899999999998 9999999654 434555567999999999998864321 12346
Q ss_pred hhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc--CCCCEEE-EcCCCchHHHHHHHhc-------------CC
Q 046230 146 MVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM--RKGSLII-SDSLNHNSIVNGARGS-------------GA 207 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~--~~g~~Vl-~~~~~h~~~~~~~~~~-------------g~ 207 (489)
+...+++++++++++. +..+++++|++++..+++++. ..++.|+ .+..+|+.+....... +.
T Consensus 85 ~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGS 164 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTE
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCc
Confidence 7788999999999974 445555788999977776542 2244555 4545666655544432 22
Q ss_pred eEEEec------CC---------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHH
Q 046230 208 TIRVFQ------HN---------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKK 268 (489)
Q Consensus 208 ~~~~~~------~~---------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~ 268 (489)
..+.++ ++ |+++|++++++. .+.++++|+++++++++|.+.+ +++|+++|++
T Consensus 165 ~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---------~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~ 235 (433)
T 1zod_A 165 FAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ---------SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEA 235 (433)
T ss_dssp EEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH---------CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHH
T ss_pred eEecCCcccccccCCchhhhHHHHHHHHHHHHHhc---------CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 333222 23 378888888752 0135678889999999998766 9999999999
Q ss_pred cCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCC
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSIS 344 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~ 344 (489)
||++||+||+|+ +||++|.. ..+.+++.| |++ ||||+||+ | ||+++++++++.+.........+.+.|
T Consensus 236 ~~~~li~DEv~~--~~g~~g~~~~~~~~~~~~---di~--s~sK~~~~-G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~ 307 (433)
T 1zod_A 236 RGMLLILDEAQT--GVGRTGTMFACQRDGVTP---DIL--TLSKTLGA-GLPLAAIVTSAAIEERAHELGYLFYTTHVSD 307 (433)
T ss_dssp HTCEEEEECTTT--TTTTTSSSSTHHHHTCCC---SEE--EECHHHHT-TSSCEEEEECHHHHHHHHHTTCCCCCTTTTC
T ss_pred hCCEEEEecccc--CCCcCchHhHHhhcCCCC---CEE--EecccccC-CCCeeEEEEhHHHHHhhccCCCCCCCCCCcC
Confidence 999999999999 88888875 557778877 887 99999987 7 999999999998876432211233489
Q ss_pred HHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC--------CCcHH
Q 046230 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN--------PAKIP 412 (489)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~--------~~~~~ 412 (489)
|+.++++.++|+.+. .++..++++++++++++.|+++ +........+.++++.+.. .....
T Consensus 308 ~~~~~a~~aal~~~~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 380 (433)
T 1zod_A 308 PLPAAVGLRVLDVVQ-------RDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGA 380 (433)
T ss_dssp HHHHHHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECTTHHH
T ss_pred HHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHH
Confidence 999999999999883 3457888899999999999875 3211122346677776642 13367
Q ss_pred HHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 413 AFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
++.+.|+++||.+.+..... ..+++||+++..+|++++++++++|+++++++
T Consensus 381 ~~~~~l~~~Gv~v~~~~~~~---~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 381 KITRECMNLGLSMNIVQLPG---MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHTTEECCEECCTT---SCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEeccCCCC---CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 89999999999998744211 24789999999999999999999999988754
No 38
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=7.3e-37 Score=310.85 Aligned_cols=341 Identities=18% Similarity=0.227 Sum_probs=267.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (489)
.++..+.+++|+++||.+ |++||||+++ +++|++ +|++.+++.+++++++.... .
T Consensus 21 ~~~~~~~~~~g~~~~d~~---------------g~~~ld~~~~~~~~~lg~~--~~~v~~a~~~~~~~~~~~~~---~-- 78 (397)
T 2ord_A 21 RFPATFVYGKGSWIYDEK---------------GNAYLDFTSGIAVNVLGHS--HPRLVEAIKDQAEKLIHCSN---L-- 78 (397)
T ss_dssp CCSCEEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCBT--CHHHHHHHHHHHHHCSCCCT---T--
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCccccccccCCC--CHHHHHHHHHHHHhcccCcc---c--
Confidence 567788899999999988 9999999876 777773 68999999999988654321 1
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcC------C--CCEEEEcCCCchHHHHHHHhcCCe------
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMR------K--GSLIISDSLNHNSIVNGARGSGAT------ 208 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~------~--g~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (489)
...+...++++.+++++|.++.+++++|++++..++.++.. + +++|+.+..+|+.+...++..|.+
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~ 158 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPF 158 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGG
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhcccc
Confidence 13577899999999999987777888999999777777642 3 345556666667776677777776
Q ss_pred ------EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC-C---CChHHHHHHHHHcCcEEEEEcc
Q 046230 209 ------IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE-L---CKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 209 ------~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~-~---~~l~~i~~l~~~~~~~li~DEa 278 (489)
+..++++|+++|++.+++ ++.+|+++++++++|. + .++++|+++|++||++||+||+
T Consensus 159 ~p~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~ 225 (397)
T 2ord_A 159 EPLVPGFEYFEFNNVEDLRRKMSE-------------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEV 225 (397)
T ss_dssp CSCCTTEEEECTTCHHHHHHHCCT-------------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCCCCeeEecCCCHHHHHHHhhc-------------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 788899999999988753 4668888999999998 3 5699999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|+ +++++|+. ..+.+++.+ |++ ||||++++ | |+++++++++ .+.......++ +.+++.++++.++
T Consensus 226 ~~--~~~~~g~~~~~~~~~~~~---d~~--s~sK~~~~-G~r~G~~~~~~~~~-~l~~~~~~~~~--~~~~~~~~a~~~~ 294 (397)
T 2ord_A 226 QC--GMGRTGKLFAYQKYGVVP---DVL--TTAKGLGG-GVPIGAVIVNERAN-VLEPGDHGTTF--GGNPLACRAGVTV 294 (397)
T ss_dssp TT--TTTTTSSSSHHHHHTCCC---SEE--EECGGGGT-TSCCEEEEECSTTC-CCCTTSSCCSS--TTCHHHHHHHHHH
T ss_pred cc--CCccCccchhhhhhCCCC---Cee--eeccccCC-CcCeEEEEEchHhc-ccCCCCcCCCC--CCCHHHHHHHHHH
Confidence 98 78888875 335566656 887 99999985 5 9999888876 55432233333 4899999999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeee--CCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFEVL--GDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF 430 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 430 (489)
|+.+. .++.+++++++.+++++.|+++ ++++. ....+.++++.+.......++.+.|+++||.+.+.
T Consensus 295 l~~~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~-- 365 (397)
T 2ord_A 295 IKELT-------KEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPA-- 365 (397)
T ss_dssp HHHHT-------STTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEE--
T ss_pred HHHHH-------hCCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccC--
Confidence 99872 2467888999999999999876 34321 12346777777765556788999999999999853
Q ss_pred CCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 431 p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.+++||+++..+|++|+++++++|++++++
T Consensus 366 -----~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 366 -----GNNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp -----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----CCCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 2478999998899999999999999998753
No 39
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-36 Score=311.16 Aligned_cols=337 Identities=18% Similarity=0.214 Sum_probs=256.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
+|..+.+++|+++||.| |++||||+++ +++|+ .||.+.+|+.+++++ +... .+
T Consensus 34 ~p~~~~~~~g~~~~d~~---------------g~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~-~~~~------~~ 89 (424)
T 2e7u_A 34 TPPFLVRGEGAYVWDAD---------------GNRYLDYVMSWGPLILGH--AHPKVLARVRETLER-GLTF------GA 89 (424)
T ss_dssp CCCCEEEEEBTEEEETT---------------CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHT-CSCC------SS
T ss_pred CCeeEEeeecCEEEeCC---------------CCEEEEccccccccccCC--CCHHHHHHHHHHHHh-CCCC------CC
Confidence 46778899999999998 9999999765 45555 479999999999987 3221 13
Q ss_pred cchhHHHHHHHHHHHh-CCCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHHh-------------cC
Q 046230 144 TLMVHNELEECVARFV-GKPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGARG-------------SG 206 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~~-------------~g 206 (489)
..+...++++.+++++ +.+..+++++|++++..++++ +.+++++|+.+..+|+........ .|
T Consensus 90 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g 169 (424)
T 2e7u_A 90 PSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAG 169 (424)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTT
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCC
Confidence 4677899999999998 455666778899999777764 677766676666666543322211 12
Q ss_pred ------CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 046230 207 ------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLD 276 (489)
Q Consensus 207 ------~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~D 276 (489)
..+..++++|+++|++++++. +.++++|+++|+++++|.+.+ +++|+++ ++||++||+|
T Consensus 170 ~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~D 238 (424)
T 2e7u_A 170 VPEEYAKLTLVLEYNDPEGLREVLKRR----------GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIAD 238 (424)
T ss_dssp CCHHHHTTEEEECTTCHHHHHHHHHHH----------GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEE
T ss_pred CCCccCCceEeCCCCCHHHHHHHHHhC----------CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEe
Confidence 346778889999999999752 125678999999998998887 9999999 9999999999
Q ss_pred cccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCccc-ccCCCHHHHHHH
Q 046230 277 EAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLY-ATSISPPAAEQI 351 (489)
Q Consensus 277 Ea~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~-~~~~~p~~~aa~ 351 (489)
|+|+ +| ++|.. ..+++++.| |++ ||||++|+ | |++++++++++.+......+.. +.+.||+.++++
T Consensus 239 Ev~~--g~-~~g~~~~~~~~~~~~---di~--s~sK~l~~-G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa 309 (424)
T 2e7u_A 239 EVMT--GF-RLAFGGATELLGLKP---DLV--TLGKILGG-GLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAG 309 (424)
T ss_dssp CTTT--TT-TSSTTHHHHHHTCCC---SEE--EECGGGGT-TSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHH
T ss_pred cCcc--cc-ccchhHHHHHhCCCc---chh--hhhhhhhC-CcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHH
Confidence 9999 77 66654 567788887 888 99999986 5 9999999999887652211112 225899999999
Q ss_pred HHHHHHHHccCCCchH-HHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCC-------------CcHHH
Q 046230 352 ISAIKVILGEDGSSRG-AQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNP-------------AKIPA 413 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~-------------~~~~~ 413 (489)
.++|+.+ .. ++..++++++++++++.|+++ ++.......+.++++.+... ....+
T Consensus 310 ~aal~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 382 (424)
T 2e7u_A 310 LATLELL-------EENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKR 382 (424)
T ss_dssp HHHHHHH-------HHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHH
T ss_pred HHHHHHH-------HhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHH
Confidence 9999987 33 678899999999999999875 55322223467788877541 12457
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+.+.|+++||.+.+.+ ..++| +++.+|++++++++++|+++
T Consensus 383 ~~~~l~~~Gv~v~~~~-------~~~~~--~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 383 FFHGLLDRGIYWPPSN-------FEAAF--LSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp HHHHHHTTTEECCSSS-------SSCEE--CCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeccC-------CCceE--eeccCCHHHHHHHHHHHHHh
Confidence 8999999999998432 12344 56799999999999999875
No 40
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=6.4e-36 Score=306.55 Aligned_cols=350 Identities=16% Similarity=0.154 Sum_probs=260.8
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc---ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN---YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~---~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
++..+.+++|+++||.+ |+++|||+++. ++|+ .+|.+.+++.+++++++.... .++
T Consensus 23 ~~~~~~~~~g~~~~d~~---------------g~~~id~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~----~~~ 81 (426)
T 1sff_A 23 HPIFADRAENCRVWDVE---------------GREYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLSHTCF----QVL 81 (426)
T ss_dssp EEEEEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHTTTCSCCCT----TTE
T ss_pred CCceEEecccCEEEeCC---------------CCEEEEcccChhhcccCC--CCHHHHHHHHHHHHhCCCccc----ccc
Confidence 45667899999999988 99999997654 5555 468999999999877543221 234
Q ss_pred cchhHHHHHHHHHHHh-C-CCCEE-EeCccHHHHHHhHh---hhcCCCCEEEEcCCCchHHHHHHHhcCCe---------
Q 046230 144 TLMVHNELEECVARFV-G-KPAAI-VFGMGYVTNSAILP---VLMRKGSLIISDSLNHNSIVNGARGSGAT--------- 208 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~-g-~~~~i-~~~sG~~a~~~~~~---al~~~g~~Vl~~~~~h~~~~~~~~~~g~~--------- 208 (489)
..+...+|++.|++++ + .++.+ ++++|++++..++. ++.+++++|+.+..+|+.+...+...|..
T Consensus 82 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~ 161 (426)
T 1sff_A 82 AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGL 161 (426)
T ss_dssp ECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCC
T ss_pred CCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCchHhhhhcCCccccccccCC
Confidence 4677899999999999 5 32444 45677788877766 67788755555555666666666666643
Q ss_pred ----EEEecCC----------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcC
Q 046230 209 ----IRVFQHN----------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYK 270 (489)
Q Consensus 209 ----~~~~~~~----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~ 270 (489)
+..++.+ |+++|++++++.. .+.++++|+++++++++|.+.+ +++|.++|++||
T Consensus 162 ~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~ 233 (426)
T 1sff_A 162 MPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA--------APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHG 233 (426)
T ss_dssp CCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC--------CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHT
T ss_pred CCCCcEEeCCCccccccchHHHHHHHHHHHHhcc--------CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 5444432 6778888886410 0124567888888887997877 999999999999
Q ss_pred cEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHH
Q 046230 271 AYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPP 346 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~ 346 (489)
++||+||+|+ +|+++|.. ..+.+++.+ |++ ||||++|+ | ||+++++++++.+....... +.+.|++
T Consensus 234 ~~li~De~~~--~~~~~g~~~~~~~~~~~~---di~--s~sK~~~~-GlriG~~~~~~~~~~~l~~~~~~~--~~~~~~~ 303 (426)
T 1sff_A 234 IMLIADEVQS--GAGRTGTLFAMEQMGVAP---DLT--TFAKSIAG-GFPLAGVTGRAEVMDAVAPGGLGG--TYAGNPI 303 (426)
T ss_dssp CEEEEECTTT--TTTTTSSSSGGGGTTSCC---SEE--EECGGGGT-SSCCEEEEEEHHHHTTSCTTSBCC--SSSSCHH
T ss_pred CEEEEechhh--ccCcccchhhhhhcCCCC---CEE--EEcccccC-CCceEEEEEcHHHHhhhccCCcCc--CCCCCHH
Confidence 9999999999 78888875 446667666 888 99999998 8 99999999888775433333 3348999
Q ss_pred HHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Cee--eCCCCCCeEEEEeCC--------CCcHHHH
Q 046230 347 AAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEV--LGDNDSPVMPIMLYN--------PAKIPAF 414 (489)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v--~~~~~~~~~~~~~~~--------~~~~~~~ 414 (489)
.++++.++|+.+. .++..++++++++++++.|++++ ++. .....++++++.+.. .....++
T Consensus 304 ~~~a~~aal~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 376 (426)
T 1sff_A 304 ACVAALEVLKVFE-------QENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEI 376 (426)
T ss_dssp HHHHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHH
T ss_pred HHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHH
Confidence 9999999999883 23577888999999999998752 321 111237788887742 1245679
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.|+++||.+.+... ..+++||+++..+|++++++++++|+++++++
T Consensus 377 ~~~l~~~gi~v~~~~~-----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 377 VARARDKGLILLSCGP-----YYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp HHHHHHTTEECEEEST-----TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcEEecCCC-----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999996442 24789999998999999999999999998765
No 41
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=8.2e-36 Score=308.19 Aligned_cols=349 Identities=15% Similarity=0.106 Sum_probs=262.9
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc---ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN---YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG 143 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~---~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (489)
.+..+.+++|+++||.| |++|||++++. ++|++ ||++.+|+.+++++++ . +....+
T Consensus 32 ~~~~~~~~~g~~~~d~~---------------g~~~lD~~~~~~~~~lG~~--~~~v~~a~~~~~~~~~-~---~~~~~~ 90 (449)
T 3a8u_X 32 DPRLIVAAEGSWLVDDK---------------GRKVYDSLSGLWTCGAGHT--RKEIQEAVAKQLSTLD-Y---SPGFQY 90 (449)
T ss_dssp SCCCEEEEEBTEEEETT---------------CCEEEETTHHHHTCTTCBS--CHHHHHHHHHHTTTCS-C---CCSSSC
T ss_pred CCceEEeeecCEEEECC---------------CCEEEECCccHhhccCCCC--CHHHHHHHHHHHHhCC-C---cccccc
Confidence 46788999999999998 99999996553 45554 7899999999998754 1 111134
Q ss_pred cchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhcC--------CCCEEEE-cCCCchHHHHHHHhcCC-----
Q 046230 144 TLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLMR--------KGSLIIS-DSLNHNSIVNGARGSGA----- 207 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~~--------~g~~Vl~-~~~~h~~~~~~~~~~g~----- 207 (489)
..+...+++++|+++++. +..+++++|++++..+++++.. +++.|++ +..+|+.+...+...|.
T Consensus 91 ~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~ 170 (449)
T 3a8u_X 91 GHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRK 170 (449)
T ss_dssp CCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHT
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhcc
Confidence 567789999999999864 4556668899999777776653 5666665 55555555555655542
Q ss_pred ---------eEEEecC----C----C--------HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----
Q 046230 208 ---------TIRVFQH----N----T--------PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---- 258 (489)
Q Consensus 208 ---------~~~~~~~----~----d--------~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---- 258 (489)
..+.++. + | +++|+++|++. ++.++++|+++++++++|.+.+
T Consensus 171 ~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~---------~~~~~~~vi~~p~~~~tG~~~~~~~~ 241 (449)
T 3a8u_X 171 LFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELH---------DASNIAAVFVEPLAGSAGVLVPPEGY 241 (449)
T ss_dssp TTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHH---------CGGGEEEEEECSSBTTTTCBCCCTTH
T ss_pred ccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhc---------CCCCEEEEEEcCccCCCCCccCCHHH
Confidence 2222221 1 5 88888888752 0125678899999999998888
Q ss_pred hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCc---ceEEEeCHHHHHHHHhhC
Q 046230 259 FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKYTC 334 (489)
Q Consensus 259 l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~---GG~i~~~~~~~~~l~~~~ 334 (489)
+++|+++|++||++||+||+|+ +||++|.. ..+.+++.| |++ ||||+|++. .|++++++++++.+....
T Consensus 242 l~~l~~l~~~~~~~li~Dev~~--~~g~~g~~~~~~~~~~~~---di~--s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~ 314 (449)
T 3a8u_X 242 LKRNREICNQHNILLVFDEVIT--GFGRTGSMFGADSFGVTP---DLM--CIAKQVTNGAIPMGAVIASTEIYQTFMNQP 314 (449)
T ss_dssp HHHHHHHHHHHTCEEEEECTTT--TTTTTSSSSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCCEEEEecccc--CccccCcchhhhhcCCCC---CEE--EEcccccCCCCceEEEEECHHHHHHhhccC
Confidence 9999999999999999999999 88888874 557788877 888 999999862 288889999999887641
Q ss_pred C-------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ceee--CCCCCCeEEEE
Q 046230 335 P-------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FEVL--GDNDSPVMPIM 404 (489)
Q Consensus 335 ~-------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~v~--~~~~~~~~~~~ 404 (489)
. .+.++.++||+.++++.++|+.+. .++..++++++.+++++.|++++ ++.. ....+.++++.
T Consensus 315 ~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~ 387 (449)
T 3a8u_X 315 TPEYAVEFPHGYTYSAHPVACAAGLAALCLLQ-------KENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQ 387 (449)
T ss_dssp SCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEE
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEE
Confidence 1 112233589999999999999883 34678899999999999998863 3322 12346788887
Q ss_pred eCCCC-----cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYNPA-----KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~~~-----~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.... ...++.+.|+++||.+.+. + +++||+++..+|++++++++++|+++++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 388 IAPRDGDAIVRPFEAGMALWKAGFYVRFG-------G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp ECCBTTBSSHHHHHHHHHHHHHTEECEEE-------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EecCcccccccHHHHHHHHHHCCcEEecC-------C-CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 76432 1236899999999999853 2 789999999999999999999999998764
No 42
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4e-35 Score=298.60 Aligned_cols=339 Identities=13% Similarity=0.058 Sum_probs=262.6
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-----CCEEEeCccHHHHH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-----PAAIVFGMGYVTNS 175 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~ 175 (489)
++|||++++|.+++. +|.+.+++.+++.+.+.. .+....|..++.+++++.+++++|. +..+++++|++++.
T Consensus 40 ~~id~~~g~~~~~~~-~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVDAHEP-TPGAFDLFSAGVQSGGVQ--AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTTTSCC-CTTHHHHHHHHHHHTHHH--HSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCCCCCC-cHHHHHHHHHHHhcCCCC--CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 599999999887774 589999999998863210 1112235677888899999998886 35555667778888
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
.++.++.++|+.|+++.++|.++...++..|++++.++++ |+++|++.+++ +.++ |
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------------~~~~-v 183 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA------------GARV-F 183 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT------------TCCE-E
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh------------CCcE-E
Confidence 8889999999999999999999999999999999998872 88999998875 2444 4
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC--CCCCccEEEcccccccCCcc--
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV--DTADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v--~p~~~Di~~~t~sK~~g~~G-- 317 (489)
++..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|........+ ...+.+++++||||++|.+|
T Consensus 184 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~--~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 261 (407)
T 3nra_A 184 LFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYS--RLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYR 261 (407)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGC
T ss_pred EEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeee
Confidence 44556899999988 9999999999999999999999 555555542222222 12345789999999999768
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD 395 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~ 395 (489)
||+++++++++.+......+.++ .+++.++++.++|+. ...+.++.+++++++.+++++.|+++ ++.+..+
T Consensus 262 ~G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 334 (407)
T 3nra_A 262 LGVAFGSRAIIARMEKLQAIVSLR--AAGYSQAVLRGWFDE-----APGWMEDRIARHQAIRDELLHVLRGCEGVFARTP 334 (407)
T ss_dssp CEEEEECHHHHHHHHHHHHHHTSS--SCHHHHGGGGGTTCC-----CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCC
T ss_pred EEEEEcCHHHHHHHHHHHhhhccC--CChHHHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccC
Confidence 99999999999887765544443 677777776666542 22356788899999999999999998 8887666
Q ss_pred CCCCeEEEEeCC-CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 396 NDSPVMPIMLYN-PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 396 ~~~~~~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+++++++.+.. .....++.+.|+++ ||.+.+...+. +.+.+++||+++ .|+++|++++++|.++++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRis~~--~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 335 QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS-PHTADSVRLNFS--QDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC-TTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 666776666654 45677899999765 99999754333 456789999996 49999999999999998765
No 43
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=6.7e-35 Score=299.54 Aligned_cols=342 Identities=13% Similarity=0.102 Sum_probs=255.4
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEeccccc---ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchh
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN---YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMV 147 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~---~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (489)
+.++.|+++||.| |++|||++++. ++|+ .+|++.+++.++++++.....+ ....+.
T Consensus 29 ~~~~~g~~~~d~~---------------g~~ylD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~----~~~~~~ 87 (429)
T 1s0a_A 29 VVSAEGCELILSD---------------GRRLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFG----GITHAP 87 (429)
T ss_dssp EEEEEBTEEEETT---------------SCEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHHCSCCCCS----SEECHH
T ss_pred EEeeeeeEEEeCC---------------CCEEEEcCccHhhccCCC--CCHHHHHHHHHHHHhccccccc----ccCCHH
Confidence 7789999999998 99999997653 4554 4789999999999875432110 113566
Q ss_pred HHHHHHHHHHHhC--CCCEEEeCccHHHHHHhHhhhc---C----CCCEEEEcCC-CchHHHHHHHhc------------
Q 046230 148 HNELEECVARFVG--KPAAIVFGMGYVTNSAILPVLM---R----KGSLIISDSL-NHNSIVNGARGS------------ 205 (489)
Q Consensus 148 ~~~l~~~la~~~g--~~~~i~~~sG~~a~~~~~~al~---~----~g~~Vl~~~~-~h~~~~~~~~~~------------ 205 (489)
..+++++++++++ .++.+++++|++++..+++++. + +++.|++..+ +|+.....+...
T Consensus 88 ~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKG 167 (429)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTT
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccC
Confidence 7899999999996 3455566788899877766542 3 4777776665 555544444332
Q ss_pred ---CCeEEEec---------CCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc-CCCCCCCCC----hHHHHHHHHH
Q 046230 206 ---GATIRVFQ---------HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI-YSMEGELCK----FPEIIAICKK 268 (489)
Q Consensus 206 ---g~~~~~~~---------~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v-~s~~G~~~~----l~~i~~l~~~ 268 (489)
+...+.++ +.|+++|++++++. +.++++|+++++ ++++|.+.+ +++|+++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~ 237 (429)
T 1s0a_A 168 YLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH----------RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDR 237 (429)
T ss_dssp TSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH----------TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHH
T ss_pred CCCCceEeCCCcccccccchHHHHHHHHHHHHhC----------CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHH
Confidence 23444443 24788999988752 135678889999 899998777 9999999999
Q ss_pred cCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cc-eEEEeCHHHHHHHHhhC-CC--ccccc
Q 046230 269 YKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CG-GYIAGSKELIQYLKYTC-PA--HLYAT 341 (489)
Q Consensus 269 ~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~G-G~i~~~~~~~~~l~~~~-~~--~~~~~ 341 (489)
||++||+||+|+ +||++|.. ..+.+++.| |++ ||||+|++ .+ ||+++++++++.+.... .. ...+.
T Consensus 238 ~~~~li~De~~~--~~g~~g~~~~~~~~~~~~---d~~--t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~ 310 (429)
T 1s0a_A 238 EGILLIADEIAT--GFGRTGKLFACEHAEIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTF 310 (429)
T ss_dssp HTCEEEEECTTT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTT
T ss_pred cCCEEEEeehhh--CCcccchHHHhhhcCCCC---CEE--EecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCC
Confidence 999999999999 88888864 556677777 888 99999986 12 99999999999887531 11 11233
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHH
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (489)
+.|++.++++.++|+.+. .++..++++++++++++.|+++ ++.... ..+.++++.+.......++.+.
T Consensus 311 ~~n~~~~~a~~aal~~~~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~ 382 (429)
T 1s0a_A 311 MGNPLACAAANASLAILE-------SGDWQQQVADIEVQLREQLAPARDAEMVADVR-VLGAIGVVETTHPVNMAALQKF 382 (429)
T ss_dssp TTCHHHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEE-EETTEEEEEESSCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-EeeEEEEEEECCcccHHHHHHH
Confidence 489999999999999873 2457788999999999999886 222222 2356777777654567789999
Q ss_pred HhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 418 CLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 418 l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
|+++||.+.+. .+++||+++..+|++|+++++++|++++++
T Consensus 383 l~~~Gi~v~~~--------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 383 FVEQGVWIRPF--------GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp HHHTTEECCCB--------TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred HHHCCCEEecc--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999998741 268999999999999999999999988654
No 44
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.9e-35 Score=300.46 Aligned_cols=343 Identities=16% Similarity=0.178 Sum_probs=251.9
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEeccccc-ccCCCCC-CccchHHHHHHHHHhCCCCCCcccCCCc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYN-YLGFAAS-DEYCTPRVIESLKKYSPSTCSSRVDGGT 144 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~-~lg~~~~-~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (489)
++..+.++.|+++||.+ |++|||++++. ...+++. ||++.+|+.++++++.. .+.. .+.
T Consensus 24 ~~~~~~~~~g~~~~d~~---------------g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~-~~~~---~~~ 84 (419)
T 2eo5_A 24 FPLVIDHGEGVWIYDVD---------------GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH-AAAN---DFY 84 (419)
T ss_dssp CCCCEEEEEBTEEEETT---------------SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC-CSCS---CSC
T ss_pred CCceEEeeecCEEEECC---------------CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc-cccc---ccC
Confidence 56678899999999998 99999997654 2344444 68999999999987542 1111 234
Q ss_pred chhHHHHHHHHHHHhCCC--CEE-EeCccHHHHHHhHhhhcC-CCCEEEEcCC-CchHHHHHHHhcC-------------
Q 046230 145 LMVHNELEECVARFVGKP--AAI-VFGMGYVTNSAILPVLMR-KGSLIISDSL-NHNSIVNGARGSG------------- 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~~i-~~~sG~~a~~~~~~al~~-~g~~Vl~~~~-~h~~~~~~~~~~g------------- 206 (489)
++...++++++++++|.+ +.+ +.++|++++..+++++.. +++.|++..+ +|+.+.......+
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~ 164 (419)
T 2eo5_A 85 NIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFM 164 (419)
T ss_dssp CHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCC
T ss_pred CHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCC
Confidence 677889999999999863 344 457788888777776543 3666666554 5555555554433
Q ss_pred CeEEEecCCC---------------------HHHHH-HHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hH
Q 046230 207 ATIRVFQHNT---------------------PSHLE-EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FP 260 (489)
Q Consensus 207 ~~~~~~~~~d---------------------~~~Le-~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~ 260 (489)
..++.+++++ +++|+ +++++. . .+.++++|+++++++++|.+.+ ++
T Consensus 165 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~--~------~~~~~~~vi~~p~~~~tG~~~~~~~~l~ 236 (419)
T 2eo5_A 165 PGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNL--V------PPEEVAGIFFEPIQGEGGYVIPPKNFFA 236 (419)
T ss_dssp TTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHT--C------CGGGEEEEEECSSBTTTTSBCCCTTHHH
T ss_pred CCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhc--c------CCCCEEEEEEeCccCCCCCccCCHHHHH
Confidence 2455666543 45677 666531 0 0125678889999888998766 99
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCC
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCP 335 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~ 335 (489)
+|+++|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||+||+ | ||++++++++ .+ ...+
T Consensus 237 ~l~~l~~~~~~~li~DE~~~--~~g~~g~~~~~~~~~~~~---d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~ 306 (419)
T 2eo5_A 237 ELQKLAKKYGILLVDDEVQM--GLGRTGKLFAIENFNTVP---DVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMH 306 (419)
T ss_dssp HHHHHHHHHTCEEEEECTTT--TTTTTSSSSGGGGGTCCC---SEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-----
T ss_pred HHHHHHHHcCCEEEEecccc--CCccCcchhhHHhcCCCC---CEE--EecccccC-CccceEEEEEchHhh-cC-Cccc
Confidence 99999999999999999999 88888875 556778777 888 99999986 6 9999998877 55 3223
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC-CCcHHHH
Q 046230 336 AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN-PAKIPAF 414 (489)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~ 414 (489)
..+ .+.|++.++++.++|+.+ . +.+++++++++++++.|+++ +... ...+.++++.+.. ..... +
T Consensus 307 ~~t--~~~n~~~~~aa~aal~~~-------~--~~~~~~~~~~~~l~~~L~~~-~~~~-~~~g~~~~i~~~~~~~~~~-~ 372 (419)
T 2eo5_A 307 SNT--FGGNALACAIGSKVIDIV-------K--DLLPHVNEIGKIFAEELQGL-ADDV-RGIGLAWGLEYNEKKVRDR-I 372 (419)
T ss_dssp --C--CCCCHHHHHHHHHHHHHH-------H--HHHHHHHHHHHHHHHHHTTS-SSEE-EEETTEEEEECSCHHHHHH-H
T ss_pred CCC--CCCCHHHHHHHHHHHHHH-------H--HHHHHHHHHHHHHHHHHHHh-hhhe-EeeeEEEEEEEecCccHHH-H
Confidence 333 348999999999999976 2 28899999999999999887 3222 2336676666531 12345 8
Q ss_pred HHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 415 SRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 415 ~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.+.|+++||.+.+.+ .+++||+++..+|++++++++++|+++++++
T Consensus 373 ~~~l~~~Gv~v~~~~-------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 373 IGESFKRGLLLLPAG-------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp HHHHHHTTEECEEET-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCEEecCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999532 4789999999999999999999999988753
No 45
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=3.1e-35 Score=298.55 Aligned_cols=338 Identities=16% Similarity=0.140 Sum_probs=259.9
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (489)
.++..+.++.|+++||.+ |+++|||+++ +++|+ .+|.+.+++.++++++.... +.
T Consensus 26 ~~~~~~~~~~g~~~~d~~---------------g~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~---~~-- 83 (395)
T 1vef_A 26 KHDLLIVRGQGARVWDAE---------------GNEYIDCVGGYGVANLGH--GNPEVVEAVKRQAETLMAMP---QT-- 83 (395)
T ss_dssp CCSSCEEEEEBTEEEETT---------------SCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCC---TT--
T ss_pred CCCccEEecccCEEEeCC---------------CCEEEEccCccccccCCC--CCHHHHHHHHHHHHhCCCCc---cc--
Confidence 466778899999999988 9999999766 45555 46899999999998865432 11
Q ss_pred CcchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHHhHhhhc--CCCCEEEEcCC-CchHHHHHHHhcCCe---------
Q 046230 143 GTLMVHNELEECVARFVGK--PAAIVFGMGYVTNSAILPVLM--RKGSLIISDSL-NHNSIVNGARGSGAT--------- 208 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~al~--~~g~~Vl~~~~-~h~~~~~~~~~~g~~--------- 208 (489)
...+...++++.++++++. +..+++++|++++..++.++. .+++.|++..+ +|+.+...+...|+.
T Consensus 84 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~ 163 (395)
T 1vef_A 84 LPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPL 163 (395)
T ss_dssp SCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSC
T ss_pred cCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCC
Confidence 1357789999999999953 455666888888877777653 34555554444 556666666666664
Q ss_pred ---EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccc
Q 046230 209 ---IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSI 281 (489)
Q Consensus 209 ---~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s~ 281 (489)
+..++++|+++|++++++ ++.+|+++++++++|.+.+ +++|.++|++||++||+||+|+
T Consensus 164 ~~~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~- 229 (395)
T 1vef_A 164 VEPVEFIPYNDVEALKRAVDE-------------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT- 229 (395)
T ss_dssp SSCEEEECTTCHHHHHHHCCT-------------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-
T ss_pred CCCeeEeCCCcHHHHHHHhcc-------------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-
Confidence 566778899999988753 4567788999999999887 9999999999999999999999
Q ss_pred ccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHH
Q 046230 282 GAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKV 357 (489)
Q Consensus 282 g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (489)
++++.|.. ..+.+++.+ |++ ||||++++ | |++++++++++.+....... +.+.+++.++++.++|+.
T Consensus 230 -~~~~~g~~~~~~~~~~~~---d~~--s~sK~~~~-g~~~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~a~~~al~~ 300 (395)
T 1vef_A 230 -GMGRTGKRFAFEHFGIVP---DIL--TLAKALGG-GVPLGVAVMREEVARSMPKGGHGT--TFGGNPLAMAAGVAAIRY 300 (395)
T ss_dssp -TTTTTSSSSTHHHHTCCC---SEE--EECGGGGT-TSSCEEEEEEHHHHHTSCTTSSCC--SSTTCHHHHHHHHHHHHH
T ss_pred -CCccCCchhHhhhcCCCC---CEE--EEcccccC-CCceEEEEehHHHHhhhccCCcCC--CcCCCHHHHHHHHHHHHH
Confidence 68887765 345667666 888 99999987 5 99999988888775532222 334899999999999998
Q ss_pred HHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee--CCCCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcC
Q 046230 358 ILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL--GDNDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATP 434 (489)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~--~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~ 434 (489)
+ ..++..++++++.+++++.|++++.++. ....++++++.+... ..++.+.|+ ++||.+.+.
T Consensus 301 ~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--~~~l~~~l~~~~gi~v~~~------ 365 (395)
T 1vef_A 301 L-------ERTRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEK--AAPYIARLEKEHRVLALQA------ 365 (395)
T ss_dssp H-------HHHTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSC--SHHHHHHHHHHHCEECEES------
T ss_pred H-------HhCCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh--HHHHHHHHHHHCCeEEecC------
Confidence 7 2355788999999999999998864321 123467777777542 567899999 889999852
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 435 LLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+.+++||+++..+|++++++++++|++++
T Consensus 366 -~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 366 -GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp -STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 35789999998999999999999998875
No 46
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=6.9e-35 Score=301.64 Aligned_cols=342 Identities=19% Similarity=0.190 Sum_probs=247.8
Q ss_pred ccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccc---cccCCCCCCccchHHHHHHHHHhCCCCCCcccCC
Q 046230 66 CFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY---NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG 142 (489)
Q Consensus 66 ~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~---~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (489)
.+|..+.++.|.++||.| |++||||+++ +++|+ .||.+.+|+.+++++ +... .
T Consensus 38 ~~p~~~~~~~G~~~~d~~---------------g~~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~~-~~~~------~ 93 (453)
T 2cy8_A 38 PHGLFISDAQGVHKTDVD---------------GNVYLDFFGGHGALVLGH--GHPRVNAAIAEALSH-GVQY------A 93 (453)
T ss_dssp SCCCCEEEEEBTEEEETT---------------CCEEEESCTTTTSCTTCB--TCHHHHHHHHHHHTT-TCSS------C
T ss_pred CCCceEEEeecCEEEECC---------------CCEEEECcccHhhcccCC--CCHHHHHHHHHHHHh-CCCC------C
Confidence 357778899999999998 9999999766 45555 478999999999976 3221 1
Q ss_pred CcchhHHHHHHHHHHHh-CCCCEEEeCccHHHHHHhHhh---hcCCCCEEEEcCCCchHHHHHHH----------hcCC-
Q 046230 143 GTLMVHNELEECVARFV-GKPAAIVFGMGYVTNSAILPV---LMRKGSLIISDSLNHNSIVNGAR----------GSGA- 207 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~~~~a---l~~~g~~Vl~~~~~h~~~~~~~~----------~~g~- 207 (489)
+..++..++++.+++.+ +.+..+++++|++++..++++ +.+++++|+.+..+|+.+..... ..|.
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~ 173 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVL 173 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC--------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCC
Confidence 34566777777777776 445666678999999777776 77777677676555544332211 1132
Q ss_pred -----eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 046230 208 -----TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 208 -----~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa 278 (489)
.+..++++|+++|++++++. +.++++|+++++++++|.+.+ +++|+++|++||++||+||+
T Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv 243 (453)
T 2cy8_A 174 PETTANTLLIRPDDIEGMREVFANH----------GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEV 243 (453)
T ss_dssp --CGGGEEEECTTCHHHHHHHHHHH----------GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred ccccCceeecCCCCHHHHHHHHHhc----------CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 35667889999999999753 125678899999988898877 99999999999999999999
Q ss_pred cccccccCCCCc-cccccCCCCCCccEEEcccccccCC--cceEEEeCHHHHHHHHhh--C-CCcccccCCCHHHHHHHH
Q 046230 279 HSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKYT--C-PAHLYATSISPPAAEQII 352 (489)
Q Consensus 279 ~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~--~GG~i~~~~~~~~~l~~~--~-~~~~~~~~~~p~~~aa~~ 352 (489)
|+ ++ ++|.. ..+.+++.| |++ ||||++++ ++|++++++++++.+... . .....+.++||+.++++.
T Consensus 244 ~~--g~-~~g~~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~ 315 (453)
T 2cy8_A 244 IS--GF-RVGNHGMQALLDVQP---DLT--CLAKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAI 315 (453)
T ss_dssp TT--TT-TTCTTHHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHH
T ss_pred cc--cc-ccCchhhhHHhCCCC---cEE--EEChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHH
Confidence 99 77 66654 566788877 888 99999986 229999999998877541 1 111122358999999999
Q ss_pred HHHHH-HHccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC-----C--------------
Q 046230 353 SAIKV-ILGEDGSSRGAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN-----P-------------- 408 (489)
Q Consensus 353 a~L~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~-----~-------------- 408 (489)
++|+. + . ++..++++++++++++.|+++ ++.......+.++++.+.. .
T Consensus 316 aal~~~~-~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 387 (453)
T 2cy8_A 316 AAIDTIL-E-------DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDV 387 (453)
T ss_dssp HHHHHHH-H-------TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCH
T ss_pred HHHHHHh-h-------hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccH
Confidence 99997 5 1 346788888899999988775 5433223457788888764 1
Q ss_pred CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 409 AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
....++.+.|+++||.+.+ . +++| +++.+|++++++++++|+++++++.
T Consensus 388 ~~~~~l~~~l~~~Gv~v~~-------~--~~~~--l~~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 388 KMIAAMRMALILEGVDIGG-------R--GSVF--LSAQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp HHHHHHHHHHHHTTEECBT-------T--TEEE--CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEeC-------C--CCEE--eeccCCHHHHHHHHHHHHHHHHHHH
Confidence 1246799999999999841 1 2355 4679999999999999999988763
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=8.7e-34 Score=287.00 Aligned_cols=356 Identities=15% Similarity=0.028 Sum_probs=266.2
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
|+....++.|+++||.+ |+++|||+.++ ..++ .+|.+.+++.+++.+...+... ...+
T Consensus 9 f~~~~~~~~g~~~~d~~---------------g~~~i~~~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y~~-----~~~~ 66 (391)
T 3dzz_A 9 FTHVPKRQGNSIKWGVL---------------KEKELPMWIAE-MDFK-IAPEIMASMEEKLKVAAFGYES-----VPAE 66 (391)
T ss_dssp CSSCCCCCTTBTTTTTC---------------CTTCEECCSSC-CSSC-CCHHHHHHHHHHHTTCCCCCBC-----CCHH
T ss_pred cchhccCCCCccceecc---------------CCCceeccccC-CCCC-CCHHHHHHHHHHHhcCcCCCCC-----CCHH
Confidence 44445588999999998 89999997554 3444 3589999999988763222211 1344
Q ss_pred hHHHHHHHHHHHhC---CCCEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC--------
Q 046230 147 VHNELEECVARFVG---KPAAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-------- 214 (489)
Q Consensus 147 ~~~~l~~~la~~~g---~~~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-------- 214 (489)
+.+++++.+++..| .++.+++ ++|++++..++.++.++|+.|+++.++|.++...++..|++++.++.
T Consensus 67 l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 146 (391)
T 3dzz_A 67 YYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYS 146 (391)
T ss_dssp HHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEE
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCcee
Confidence 55556666666555 2345555 55577778899999999999999999999999999999999999887
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCcc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV 291 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~ 291 (489)
.|+++|++++++ .++.+|+++++++++|.+ .++++|+++|++||++||+||+|+ .+.+.|...
T Consensus 147 ~d~~~l~~~l~~------------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~ 212 (391)
T 3dzz_A 147 VNWADLEEKLAT------------PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG--DLVLTDEDI 212 (391)
T ss_dssp CCHHHHHHHHTS------------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCSSCCC
T ss_pred ecHHHHHHHHhc------------cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccc--cccCCCCCc
Confidence 488999998863 134456667789999999 669999999999999999999999 677666543
Q ss_pred ccccCCCC--CCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCc
Q 046230 292 CELLEVDT--ADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSS 365 (489)
Q Consensus 292 ~~~~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~ 365 (489)
.....+.. .+.++++.|+||++|.+| ||++++ +++++.+........ ..+.+++.++++.++|+... .
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~-----~ 286 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAG-IGEPNLLAIPAAIAAYEEGH-----D 286 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHT-CSSCCTTHHHHHHHHHHHCH-----H
T ss_pred eehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHhccH-----H
Confidence 22333321 222388999999998667 999987 889888876532111 12378888888888887531 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEE
Q 046230 366 RGAQKLARIRENSNFFRSELQK-M-GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARAR 441 (489)
Q Consensus 366 ~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iR 441 (489)
..++.+++++++.+++.+.|++ + |+.+..+.++.++++.+.. .....++.+.|+ ++||.+.+..... +.+.+++|
T Consensus 287 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iR 365 (391)
T 3dzz_A 287 WLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYR-GNGHEFVR 365 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGC-TTGGGEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEE
Confidence 4678889999999999999999 4 8888777767766666654 246788999996 7899999743222 23458999
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 442 ICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 442 i~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
|+++ ++++++++++++|.++++++
T Consensus 366 is~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 366 INLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp EECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred EEec--CCHHHHHHHHHHHHHHHHHh
Confidence 9986 79999999999999998765
No 48
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.1e-34 Score=292.30 Aligned_cols=344 Identities=14% Similarity=0.076 Sum_probs=260.4
Q ss_pred cCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHH
Q 046230 72 SSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNEL 151 (489)
Q Consensus 72 ~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l 151 (489)
.+++|+++||.+ |+++|||++++ ..++ .+|.+.+++.+++.+...... . .+ .++
T Consensus 10 ~~~~g~~~~d~~---------------g~~~idl~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y~---~-~~-----~~l 63 (377)
T 3fdb_A 10 LRARNTMKWTRY---------------GQGVLPLWVAE-SDFS-TCPAVLQAITDAVQREAFGYQ---P-DG-----SLL 63 (377)
T ss_dssp HHHTCCHHHHSS---------------CTTSEECCSSC-CCSC-CCHHHHHHHHHHHHTTCCSSC---C-SS-----CCH
T ss_pred hcCCCCceeecc---------------CCCeeeecccC-CCCC-CCHHHHHHHHHHHHcCCCCCC---C-CC-----HHH
Confidence 367899999998 99999997664 3444 468999999999886222211 1 12 356
Q ss_pred HHHHHHHhC--------CCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC---CHHHH
Q 046230 152 EECVARFVG--------KPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---TPSHL 220 (489)
Q Consensus 152 ~~~la~~~g--------~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~~L 220 (489)
++.++++++ .++.+++++|++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|
T Consensus 64 r~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l 143 (377)
T 3fdb_A 64 SQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDV 143 (377)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHH
Confidence 666666654 2345555667777888899999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC-CccccccC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG-RGVCELLE 296 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G-~~~~~~~~ 296 (489)
++.+++ +.+ ++++..+++++|.+.+ +++|+++|++||+++|+||+|+ .+.++| ........
T Consensus 144 ~~~l~~------------~~~-~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~ 208 (377)
T 3fdb_A 144 EKGFQA------------GAR-SILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHA--PLVFDGQHTVAAGVS 208 (377)
T ss_dssp HHHHHT------------TCC-EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTG--GGBSSSCCCCGGGSC
T ss_pred HHHhcc------------CCC-EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--hhhcCCCCCcccHHH
Confidence 998875 244 4555556899999875 7788888999999999999999 677766 33333333
Q ss_pred CCCCCccEEEcccccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLA 372 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~ 372 (489)
++..+.+++++||||++|.+| ||++. ++++++.+........ .+.+++.++++.++|+... .+.++.++
T Consensus 209 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~-----~~~~~~~~ 281 (377)
T 3fdb_A 209 DTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIK--DGASTLGLIAAEAAYRYGT-----DFLNQEVA 281 (377)
T ss_dssp HHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHH--CCCCHHHHHHHHHHHHHCH-----HHHHHHHH
T ss_pred ccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhc--CCCCHHHHHHHHHHHhccH-----HHHHHHHH
Confidence 322334688899999998778 87765 7899998876554333 3489999999899887531 24678889
Q ss_pred HHHHHHHHHHHHHHhC--CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCC
Q 046230 373 RIRENSNFFRSELQKM--GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHT 449 (489)
Q Consensus 373 ~~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t 449 (489)
+++++.+++.+.|++. ++.+..+.++.++++.+.......++.+.|+++ ||.+.+...+.. .+.+++||+++ .+
T Consensus 282 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~Ris~~--~~ 358 (377)
T 3fdb_A 282 YLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGE-DGTGFCRLNFA--TS 358 (377)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCG-GGTTEEEEECC--SC
T ss_pred HHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccC-CCCCEEEEEeC--CC
Confidence 9999999999999995 888887777777677776532235677888877 999997433222 24689999986 48
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046230 450 KEDLIKALEVISRVGDL 466 (489)
Q Consensus 450 ~edid~~l~~l~~~~~~ 466 (489)
++++++++++|.+++++
T Consensus 359 ~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 359 REVLEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998865
No 49
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=8.2e-34 Score=290.75 Aligned_cols=354 Identities=15% Similarity=0.083 Sum_probs=268.2
Q ss_pred CCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhH
Q 046230 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVH 148 (489)
Q Consensus 69 ~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (489)
....++.|+++||.+ ++|+++|||+..+ ..++ .+|.+.+++.+++++...+... ...++.
T Consensus 43 ~~~~~g~g~~~~d~~-------------~~g~~~i~~~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y~~-----~~~~l~ 102 (421)
T 3l8a_A 43 RPDRLNQFTYKWKTS-------------ENNPELLQMWVAD-MDFL-PVPEIKEAIINYGREHIFGYNY-----FNDDLY 102 (421)
T ss_dssp CCCCTTTTBTTTGGG-------------TTCTTCEECCSSC-CCSC-CCHHHHHHHHHHHHHCCSSCBC-----CCHHHH
T ss_pred ccccCCCCCcccccc-------------CCCCCeeecccCC-CCCC-CCHHHHHHHHHHHhcCCcCCCC-----CCHHHH
Confidence 455678899998876 1157899997554 4444 4689999999999873222211 124555
Q ss_pred HHHHHHHHHHhCC---CCEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------C
Q 046230 149 NELEECVARFVGK---PAAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------T 216 (489)
Q Consensus 149 ~~l~~~la~~~g~---~~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d 216 (489)
+++++.+++..+. ++.+++ ++|++++..+++++.++|+.|++..+.|+++...+...|.+++.++.+ |
T Consensus 103 ~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d 182 (421)
T 3l8a_A 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEID 182 (421)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECC
T ss_pred HHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeC
Confidence 6666667666662 344555 555668899999999999999999999999999999999998887753 8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCcccc
Q 046230 217 PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293 (489)
Q Consensus 217 ~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~ 293 (489)
+++|++++++ .++.+|+++++++++|.+ .++++|+++|++||++||+||+|+ +++++|.....
T Consensus 183 ~~~le~~i~~------------~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~--~~~~~g~~~~~ 248 (421)
T 3l8a_A 183 FEQLEKDIID------------NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ--DLALFGNTHHS 248 (421)
T ss_dssp HHHHHHHHHH------------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCC
T ss_pred HHHHHHHhhc------------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCcc
Confidence 9999999975 245677778999999988 569999999999999999999999 88888865444
Q ss_pred ccCCCC--CCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchH
Q 046230 294 LLEVDT--ADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRG 367 (489)
Q Consensus 294 ~~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~ 367 (489)
...+.+ .+.++++.|+||++|.+| |+++++ +++++.+......+. ..+.|++.++++.++|+.. ..+.
T Consensus 249 ~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~-~~~~n~~~~~a~~aal~~~-----~~~~ 322 (421)
T 3l8a_A 249 LNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANN-QHEVPTVGMIATQAAFQYG-----KPWL 322 (421)
T ss_dssp GGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT-CSCCCHHHHHHHHHHHHHC-----HHHH
T ss_pred HHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcc-cCCCCHHHHHHHHHHHhcc-----HHHH
Confidence 444443 244677889999998667 999988 899888876542221 1248999999999998853 1246
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEee
Q 046230 368 AQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 368 ~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~ 444 (489)
++++++++++.+++++.|+++ ++.+..+.++.+.++.+.. .....++.+.|+++ ||.+.+.... .+.+.+++||++
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f-~~~~~~~iRi~~ 401 (421)
T 3l8a_A 323 EELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHF-GKEGKYFARLNV 401 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGG-CGGGTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhh-CCCCCCEEEEEe
Confidence 788899999999999999986 8888777777766677654 23556789999855 9999973322 124568999998
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 046230 445 SASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 445 ~~~~t~edid~~l~~l~~~~~ 465 (489)
+ +++++|++++++|+++++
T Consensus 402 ~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 402 A--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp C--SCHHHHHHHHHHHHHHC-
T ss_pred c--CCHHHHHHHHHHHHHHHh
Confidence 6 799999999999998764
No 50
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3.9e-34 Score=288.17 Aligned_cols=335 Identities=16% Similarity=0.188 Sum_probs=254.7
Q ss_pred cCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccc-cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcc
Q 046230 67 FGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNY-LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTL 145 (489)
Q Consensus 67 ~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~-lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (489)
++..+.+++|.++++.+ |+.+|||+++.+ ..+++.+|.+.+++.+++++++.... .+ ..
T Consensus 10 ~~~~~~~~~g~~~~~~~---------------g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~----~y-~~ 69 (375)
T 2eh6_A 10 LPVKFVRGKGVYLYDEE---------------GKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSN----LY-EN 69 (375)
T ss_dssp EEEEEEEEEBTEEEETT---------------CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCT----TB-CC
T ss_pred CCccEEeeecCEEEeCC---------------CCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCc----cc-CC
Confidence 45668899999999988 999999987654 46664568999999999987643211 11 23
Q ss_pred hhHHHHHHHHHHHhCC-CCEEEeCccHHHHHHhHhh---hc---CCC-CEEEEcCCCchHH-HHHHHhcCC---------
Q 046230 146 MVHNELEECVARFVGK-PAAIVFGMGYVTNSAILPV---LM---RKG-SLIISDSLNHNSI-VNGARGSGA--------- 207 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~~~~a---l~---~~g-~~Vl~~~~~h~~~-~~~~~~~g~--------- 207 (489)
....++++.+++++|. ++.+++++|++++..++.+ +. ++| +.|++..+.|+.. .......+.
T Consensus 70 ~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 2eh6_A 70 PWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEP 149 (375)
T ss_dssp HHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCS
T ss_pred HHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCC
Confidence 5568999999999998 5556667788888666654 45 667 8888888775543 333333322
Q ss_pred ---eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccc
Q 046230 208 ---TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 208 ---~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~~l~~~~~~~li~DEa~s 280 (489)
.+..++++|+++|++++++ ++.+|+++++++++|.+.+ +++|.++|++||++||+||+|+
T Consensus 150 ~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~ 216 (375)
T 2eh6_A 150 LVPGFSYAKLNDIDSVYKLLDE-------------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT 216 (375)
T ss_dssp CCSSEEEECTTCHHHHHTTCCT-------------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCCceeCCCchHHHHHHHhcC-------------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc
Confidence 1666777899998887653 4557777899999999988 9999999999999999999999
Q ss_pred cccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 281 IGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 281 ~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
++++++.. ..+.++..+ |++ ||||++++ | |++++++++++.+........+ +.+++.++++.++|+
T Consensus 217 --~~~~~~~~~~~~~~~~~~---d~~--s~SK~~~~-g~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 286 (375)
T 2eh6_A 217 --GIGRTGEFYAYQHFNLKP---DVI--ALAKGLGG-GVPIGAILAREEVAQSFTPGSHGSTF--GGNPLACRAGTVVVD 286 (375)
T ss_dssp --TTTTTSSSSGGGGGTCCC---SEE--EECGGGGT-TSCCEEEEEEHHHHTTCCTTSCCCSS--TTCHHHHHHHHHHHH
T ss_pred --CCCCCCcchhhhhcCCCC---CEE--EEcccccC-CCCeEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHH
Confidence 68877754 344556545 888 99999985 5 9999998888777653333334 378999999999888
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLL 436 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~ 436 (489)
.+ . +..++++++.+++.+.|++++..... ..+.++++.+.. ...++.+.|.++||.+.+. +
T Consensus 287 ~~-------~--~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~--~~~~~~~~l~~~gi~~~~~-------~ 347 (375)
T 2eh6_A 287 EV-------E--KLLPHVREVGNYFKEKLKELGKGKVK-GRGLMLGLELER--ECKDYVLKALEKGLLINCT-------A 347 (375)
T ss_dssp HH-------H--HHHHHHHHHHHHHHHHHHHTTSSEEE-EETTEEEEECSS--CCHHHHHHHHHTTEECEEE-------T
T ss_pred HH-------H--HHHHHHHHHHHHHHHHHHHHhcCCce-EEEEEEEEEEcC--cHHHHHHHHHHCCCEEecC-------C
Confidence 75 2 77889999999999999998653332 346777777653 3567899999999999853 3
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 437 LARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+++||+++..+|++++++++++|+++
T Consensus 348 ~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 348 GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 578999998899999999999999875
No 51
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=9.8e-33 Score=278.50 Aligned_cols=349 Identities=11% Similarity=0.028 Sum_probs=253.5
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHH
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNE 150 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~ 150 (489)
..++.|+++||.+ .++++|||++++ ..++ .+|.+.+++.+++.+........ ..++.++
T Consensus 9 ~~~~~g~~~~d~~--------------~~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y~~~-----~~~~~~~ 67 (383)
T 3kax_A 9 NRRGTHSIKWDTY--------------KNEELIHAWIAD-MDFE-VPQPIQTALKKRIEHPIFGYTLP-----PENIGDI 67 (383)
T ss_dssp ----------CCC--------------SSSCCEECCCSS-CSSC-CCHHHHHHHHHHHHSCCCCCCCC-----CTTHHHH
T ss_pred eccCCCceeeecc--------------CCCCeeeccccc-CCCC-CCHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Confidence 3478899999843 058999998664 4454 35899999999987622222111 3566777
Q ss_pred HHHHHHHHhC---CCC-EEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHH
Q 046230 151 LEECVARFVG---KPA-AIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPS 218 (489)
Q Consensus 151 l~~~la~~~g---~~~-~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~ 218 (489)
+++.+++..| .++ .++.++|++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |++
T Consensus 68 l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 147 (383)
T 3kax_A 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFE 147 (383)
T ss_dssp HHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHH
T ss_pred HHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHH
Confidence 8888888777 234 4444566677788899999999999999999999999999999999988763 788
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCcccccc
Q 046230 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL 295 (489)
Q Consensus 219 ~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~ 295 (489)
+|++.+.. +.+ +|++.++++++|.+.+ +++|+++|++||++||+||+|+ .+.++|.......
T Consensus 148 ~l~~~l~~------------~~~-~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~ 212 (383)
T 3kax_A 148 HLEKQFQQ------------GVK-LMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHS--DIIYADHTHTPFA 212 (383)
T ss_dssp HHHHHHTT------------TCC-EEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCCGG
T ss_pred HHHHHhCc------------CCe-EEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccc--ccccCCCCceeHh
Confidence 99988832 234 4556778999999877 6777777999999999999999 7777765433333
Q ss_pred CCCC--CCccEEEcccccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHH
Q 046230 296 EVDT--ADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQ 369 (489)
Q Consensus 296 ~v~p--~~~Di~~~t~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (489)
.+.+ .+.+++++||||++|.+| ||+++ ++++++.+......+.+ .+.+++.++++.++|+.. ....++
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~-----~~~~~~ 286 (383)
T 3kax_A 213 SLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGF-HGLNIFAYTAMQSAYTEC-----NDWLNE 286 (383)
T ss_dssp GSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC-CCCCHHHHHHHHHHTTTC-----HHHHHH
T ss_pred hcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhccc-CCCCHHHHHHHHHHHHhh-----HHHHHH
Confidence 3332 234688899999999768 99988 68888888765432221 248888888888887642 124677
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeec
Q 046230 370 KLARIRENSNFFRSELQKM--GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICIS 445 (489)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~ 445 (489)
.+++++++.+++.+.|++. ++.+..+.++.++++.+.. .....++.+.|+ ++||.+.+..... +.+.+++|++++
T Consensus 287 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRi~~~ 365 (383)
T 3kax_A 287 IRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYG-LGGEEHIGINIG 365 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGC-TTCTTEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhc-CCCCCeEEEEEc
Confidence 8899999999999999984 8888777667766666654 246788999998 6799999743222 234689999986
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 046230 446 ASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 446 ~~~t~edid~~l~~l~~~~ 464 (489)
.+++++++++++|.+++
T Consensus 366 --~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 366 --CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp --SCHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHh
Confidence 69999999999998875
No 52
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=9e-33 Score=280.65 Aligned_cols=353 Identities=12% Similarity=0.033 Sum_probs=262.3
Q ss_pred cCCCcc-CCCCCeEEEeeccccCCcccccccCcc-------ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCc
Q 046230 67 FGRPIS-SAPDAWFDVVERFSNDSNKTLKRTNKV-------NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSS 138 (489)
Q Consensus 67 ~~~~i~-~~~G~~i~~~dr~~~~~~~~~~~~~~g-------~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~ 138 (489)
|+..+. ++.|+++||.+ | +++|||++++ .+++ .+|.+.+++.+++.+.....
T Consensus 5 ~~~~~~~~~~g~~~~d~~---------------g~~~g~~~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y--- 64 (399)
T 1c7n_A 5 FTTKISRKNLGSLKWDLM---------------YSQNPEVGNEVVPLSVAD-MEFK-NPPELIEGLKKYLDETVLGY--- 64 (399)
T ss_dssp SCCCCCCTTTTBHHHHHH---------------HHHCTTCCTTCCCCCSSS-CSSC-CCHHHHHHHHHHHHHCCCSS---
T ss_pred ccccccccCCCccccccc---------------hhhccccCCCceeeeecC-CCCC-CCHHHHHHHHHHHhcCCCCC---
Confidence 444444 78999999987 4 3789997654 5555 35889999999987521111
Q ss_pred ccCCCcchhHHHHHHHHHHHh----C--C-CCEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEE
Q 046230 139 RVDGGTLMVHNELEECVARFV----G--K-PAAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIR 210 (489)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~----g--~-~~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~ 210 (489)
+.. ..++++.+++++ | . ++.+++ ++|++++..++.++.++|+.|+++.++|+++...++..|++++
T Consensus 65 ----~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~ 138 (399)
T 1c7n_A 65 ----TGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKII 138 (399)
T ss_dssp ----BCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEE
T ss_pred ----CCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEE
Confidence 111 467888888775 5 2 344555 5557778888999999999999999999999999999999998
Q ss_pred EecC--------CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccc
Q 046230 211 VFQH--------NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAH 279 (489)
Q Consensus 211 ~~~~--------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~ 279 (489)
.++. .|+++|++.+++ .+..+|++..+++++|.+.+ +++|+++|++||++||+||+|
T Consensus 139 ~~~~~~~~g~~~~d~~~l~~~l~~------------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 206 (399)
T 1c7n_A 139 ECELLEKDGYYTIDFQKLEKLSKD------------KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIH 206 (399)
T ss_dssp ECCCEEETTEEECCHHHHHHHHTC------------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTT
T ss_pred ecccccCCCCEEEcHHHHHHHhcc------------CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 8775 368888888763 13345556778999999988 999999999999999999999
Q ss_pred ccccccCCCCccccccCCCC--CCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 280 SIGAVGKTGRGVCELLEVDT--ADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 280 s~g~~g~~G~~~~~~~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
+ .++.+|........+++ .+.+++++|+||++|.+| ||++++ +++++.+......+.+ .+.+++.++++.+
T Consensus 207 ~--~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~a~~~ 283 (399)
T 1c7n_A 207 F--DLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSG-MPFTTLGYKACEI 283 (399)
T ss_dssp T--TCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC-CCCCHHHHHHHHH
T ss_pred c--ccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhccc-CCCCHHHHHHHHH
Confidence 9 66666643223333322 234688899999999768 999986 6788888765443322 1378888888888
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCeEEEEeCCC-CcHHHHHHHHh-hCCceEEeec
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-M-GFEVLGDNDSPVMPIMLYNP-AKIPAFSRECL-RQNVAVVTVA 429 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~ 429 (489)
+|+.. ....++.+++++++.+++.+.|++ + ++.+..+.++.++++.+... ....++.+.|+ ++||.+.+..
T Consensus 284 ~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 358 (399)
T 1c7n_A 284 CYKEC-----GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGY 358 (399)
T ss_dssp HHHHC-----HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGG
T ss_pred HHhCC-----hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCcc
Confidence 88742 125677888899999999999998 6 78776666666666766532 45678999998 6799999743
Q ss_pred CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 430 ~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+. +...+++||+++ .+++++++++++|.++++++.
T Consensus 359 ~~~-~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 359 IFG-DGGIGFERINLA--APSSVIQESLERLNKALKDLK 394 (399)
T ss_dssp GGC-GGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred ccC-CCCCCeEEEEec--cCHHHHHHHHHHHHHHHHHHH
Confidence 222 234579999996 458999999999999998875
No 53
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2.3e-32 Score=278.43 Aligned_cols=350 Identities=18% Similarity=0.138 Sum_probs=256.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEe-Ccc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVF-GMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~-~sG 170 (489)
|+++|||+++.+--.++.++.+.+++.+++++.+... . ++......++++.+|+++ |. ++.+++ ++|
T Consensus 33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~----~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~ 107 (407)
T 2zc0_A 33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSV----M-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGG 107 (407)
T ss_dssp SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGG----S-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHH
T ss_pred CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhccccc----c-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCH
Confidence 6789999765432122235789999999988743111 1 222333478889999888 72 345555 555
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.++....++ ++.++++++
T Consensus 108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~------~~~~~v~~~ 181 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKG------QKVKLIYTI 181 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTT------CCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhccc------CCceEEEEC
Confidence 777888899999999999999999999999999999998888764 7899999887321111 123444467
Q ss_pred cCcCCCCCCCCChH---HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEE
Q 046230 247 EGIYSMEGELCKFP---EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYI 320 (489)
Q Consensus 247 e~v~s~~G~~~~l~---~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i 320 (489)
+.+++++|.+.+.+ +|+++|++||++||+||+|+ .+..+|........+++.+.+++++||||++| +| ||+
T Consensus 182 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 258 (407)
T 2zc0_A 182 PTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYN--FMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWI 258 (407)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCc--ccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEE
Confidence 88899999998865 99999999999999999999 55555543222233333334688899999999 46 999
Q ss_pred EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCC-chHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCC
Q 046230 321 AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS-SRGAQKLARIRENSNFFRSELQKM--GFEVLGDND 397 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~ 397 (489)
++++++++.+......+.++ .+++.++++.++|+... .. ...++.+++++++.+++.+.|++. ++.+..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 333 (407)
T 2zc0_A 259 IAEGEILKKVLMQKQPIDFC--APAISQYIALEYLKRGY---FEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIA 333 (407)
T ss_dssp ECCHHHHHHHHHHHTTTTSS--SCHHHHHHHHHHHHTTH---HHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSB
T ss_pred ecCHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHcCC---chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCC
Confidence 99999999888765554444 68888888888876420 00 134567788889999999999874 676655556
Q ss_pred CCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 398 SPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPAT-PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+.++++.+.......++.+.|.++ ||.+.+...+.. +.+.+++||+++.. |++++++++++|.++++++.
T Consensus 334 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 334 GMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp SSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 777778776555678899999999 999987432221 12457999999755 89999999999999987763
No 54
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.9e-32 Score=277.17 Aligned_cols=352 Identities=12% Similarity=-0.007 Sum_probs=263.7
Q ss_pred ccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHH
Q 046230 71 ISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNE 150 (489)
Q Consensus 71 i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~ 150 (489)
..++.|+++||.+... + + ++.+|||++++ .+++ .+|.+.+++.+++.+..... ..+..++..+
T Consensus 13 ~~~~~g~~~~d~~~~~--------~-~-~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y-----~~~~~~~~~~ 75 (391)
T 4dq6_A 13 DRSNNFSSKWSEMEKK--------Y-G-TNDLLPMWVAD-MDFK-AAPCIIDSLKNRLEQEIYGY-----TTRPDSYNES 75 (391)
T ss_dssp CCTTTTBHHHHCHHHH--------H-S-CSCSEECCSSS-CSSC-CCHHHHHHHHHHHTTCCCCC-----BCCCHHHHHH
T ss_pred ccccCCceeeeecccc--------c-C-CCCceeccccC-CCCC-CCHHHHHHHHHHHhCCCCCC-----CCCCHHHHHH
Confidence 3477899999986110 0 0 35569998665 3444 35889999999887622221 1134677778
Q ss_pred HHHHHHHHhC--C--CCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC---------CH
Q 046230 151 LEECVARFVG--K--PAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---------TP 217 (489)
Q Consensus 151 l~~~la~~~g--~--~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~ 217 (489)
+++.+++++| . +..++.++|++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+
T Consensus 76 l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~ 155 (391)
T 4dq6_A 76 IVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDY 155 (391)
T ss_dssp HHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCH
T ss_pred HHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeH
Confidence 8888888877 2 345555666777788899999999999999999999999999999999988765 77
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 218 SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 218 ~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
++|++++++ +.+|++.++++++|.+ .++++|+++|++||++||+||+|+ .+.++|......
T Consensus 156 ~~l~~~l~~--------------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~~~~ 219 (391)
T 4dq6_A 156 EDIENKIKD--------------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHS--DIILKKHKHIPM 219 (391)
T ss_dssp HHHHHHCTT--------------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCTTCCCCCG
T ss_pred HHHHHHhhc--------------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecccc--ccccCCCCccCH
Confidence 888876642 3456667779999998 558999999999999999999999 777776543334
Q ss_pred cCCCC--CCccEEEcccccccCCcc---eEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHH
Q 046230 295 LEVDT--ADVDIMMGTFTKSFGSCG---GYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGA 368 (489)
Q Consensus 295 ~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (489)
..+.+ .+.+++++|+||++|.+| ||+++++ ++++.+......+. ..+.+++.++++.++|+... ...+
T Consensus 220 ~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~-----~~~~ 293 (391)
T 4dq6_A 220 ASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRID-IKRNNCFSLVATEASYNNGE-----SWLE 293 (391)
T ss_dssp GGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT-CCCCCHHHHHHHHHHHHHCH-----HHHH
T ss_pred HHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHhchH-----HHHH
Confidence 44433 133588899999998767 9998875 88888776532221 22488889988888887531 2467
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEee
Q 046230 369 QKLARIRENSNFFRSELQKM--GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~ 444 (489)
+.+++++++.+++.+.|++. ++.+..+.++.++++.+.. .....++.+.|+++ ||.+.+..... +.+.+++|+++
T Consensus 294 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRis~ 372 (391)
T 4dq6_A 294 SFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFG-IGGSGYQRINL 372 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC-TTCTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhC-CCCCCeEEEEE
Confidence 78899999999999999984 8888777767766676654 45678899999998 99999733222 23468999999
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q 046230 445 SASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 445 ~~~~t~edid~~l~~l~~~~ 464 (489)
+ ++++++++++++|.+++
T Consensus 373 ~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 373 A--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp C--SCHHHHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHHh
Confidence 5 79999999999999876
No 55
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.5e-32 Score=276.17 Aligned_cols=329 Identities=17% Similarity=0.140 Sum_probs=248.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--------CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--------PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~sG 170 (489)
|+++|||+++.+ .++. ++.+.+++.+++++..... +......++++.+|++++. ++.+++++|
T Consensus 28 g~~~i~l~~~~~-~~~~-~~~v~~a~~~~~~~~~~~y-------~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 98 (370)
T 2z61_A 28 GKKVIHLEIGEP-DFNT-PKPIVDEGIKSLKEGKTHY-------TDSRGILELREKISELYKDKYKADIIPDNIIITGGS 98 (370)
T ss_dssp TCCCEECCCCSC-SSCC-CHHHHHHHHHHHHTTCCSC-------CCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSH
T ss_pred CCCEEEccCCCC-CCCC-CHHHHHHHHHHHHcCccCC-------CCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCCh
Confidence 678999976653 4443 5889999999887521111 1122347888888888741 345555667
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
++++..++.++.++|+.|+++.++|+++...++..|++++.++ .|+++|++.+++ +..+|++++++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-~d~~~l~~~l~~-------------~~~~v~~~~p~ 164 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD-FTVESLEEALSD-------------KTKAIIINSPS 164 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC-SSHHHHHHHCCS-------------SEEEEEEESSC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC-CCHHHHHHhccc-------------CceEEEEcCCC
Confidence 7888888999999999999999999999999999999999988 789998887753 33456667889
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
+++|.+.+++ |.++|++||++||+||+|+ .+..+|+.. ....++ ..+.|++++||||++|.+| ||+++++++
T Consensus 165 nptG~~~~~~-l~~~~~~~~~~li~De~~~--~~~~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 240 (370)
T 2z61_A 165 NPLGEVIDRE-IYEFAYENIPYIISDEIYN--GLVYEGKCY-SAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEI 240 (370)
T ss_dssp TTTCCCCCHH-HHHHHHHHCSEEEEECTTT--TCBSSSCCC-CGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHH
T ss_pred CCcCcccCHH-HHHHHHHcCCEEEEEcchh--hcccCCCCc-CHHHccCCCCcEEEEecChhccCCccceEEEEEECHHH
Confidence 9999999999 9999999999999999999 555555321 122221 2345899999999998778 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.+......+.+ +.|++.++++.++|+.+. ..+.++.+++++++.+++.+.|+++|+.+..+.++.++++.+.
T Consensus 241 ~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 314 (370)
T 2z61_A 241 IEAILKLQQNLFI--SAPTISQYAALKAFEKET----EREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIG 314 (370)
T ss_dssp HHHHHHHHHHHTS--SSCHHHHHHHGGGGSHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCS
T ss_pred HHHHHHHHhhccc--CCCHHHHHHHHHHHhccC----HHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecC
Confidence 9988765543333 488888888888876410 1145778889999999999999998888766655665555544
Q ss_pred CCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 407 ~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
. ...++.+.|+ ++||.+.+...+. +.+.+++||+++ ++++++++++++|.++++
T Consensus 315 ~--~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 315 E--DGREFAYKLLKEKFVALTPGIGFG-SKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp S--CHHHHHHHHHHHHCEECEEGGGGC-GGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred C--CHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 3 5678999998 6799999743222 123578999996 799999999999998764
No 56
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.2e-31 Score=267.85 Aligned_cols=323 Identities=11% Similarity=0.067 Sum_probs=251.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 176 (489)
|+++|||+++. ..++ .+|.+.+++.+++.+... . ......++++++|++++.+ ..+++++|++++..
T Consensus 15 ~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~-y--------~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~ 83 (354)
T 3ly1_A 15 TDNPIRINFNE-NPLG-MSPKAQAAARDAVVKANR-Y--------AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRA 83 (354)
T ss_dssp SSSCEECSSCC-CSSC-CCHHHHHHHHHTGGGTTS-C--------CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHH
T ss_pred CCceEEccCCC-CCCC-CCHHHHHHHHHHHhhCcC-C--------CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHH
Confidence 89999998664 3333 358899999888775211 1 1345689999999999953 44555666777788
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.+++. .++.+|++.++++
T Consensus 84 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~l~~p~n 152 (354)
T 3ly1_A 84 AIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY-----------SGPSIVYLVNPNN 152 (354)
T ss_dssp HHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC-----------SSCEEEEEESSCT
T ss_pred HHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC-----------CCCCEEEEeCCCC
Confidence 899999999999999999999999999999999999987 899999998731 1344555667899
Q ss_pred CCCCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---eEEEeCH
Q 046230 252 MEGELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK 324 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~ 324 (489)
++|.+.+.+++.++++. ||+++|+||+|+ .+...+.. .....+.. .+.+++++||||++|.+| ||+++++
T Consensus 153 ptG~~~~~~~l~~l~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 229 (354)
T 3ly1_A 153 PTGTITPADVIEPWIASKPANTMFIVDEAYA--EFVNDPRFRSISPMITQG-AENIILLKTFSKIHAMAGMRVGYAVAHP 229 (354)
T ss_dssp TTCCCCCHHHHHHHHHTCCTTEEEEEECTTG--GGCCCTTCCCSHHHHHTT-CSSEEEEEESSSTTCCGGGCCEEEECCH
T ss_pred CcCCCcCHHHHHHHHHhCCCCeEEEEeccHH--HhccccccCCHHHHhhhc-CCCEEEEeeChhhccChhhhheeeecCH
Confidence 99999998888888877 999999999999 66665542 22222211 134788999999998767 9999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM 404 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~ 404 (489)
++++.+...... + +.|++.++++.++|+.. ...++.+++++++.+++.+.|+++|+.+.. ..+.++++.
T Consensus 230 ~~~~~~~~~~~~--~--~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~ 298 (354)
T 3ly1_A 230 TVIALMGRYVAG--E--KINFSGVDAALASMNDS------AFITYSKKSNDVSRQILLKALEDLKLPYLP-SEGNFVFHQ 298 (354)
T ss_dssp HHHHHHGGGTTC--S--CCCHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC-CCSSEEEEE
T ss_pred HHHHHHHHhcCC--C--CCCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCeECC-CCceEEEEE
Confidence 999999876654 3 48899998888887632 256788899999999999999998887764 356666666
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.. ...++.+.|.++||.+. ..++ ...+++||+++ |++|+++++++|++++++
T Consensus 299 ~~~--~~~~~~~~l~~~gi~v~-g~~~---~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 299 LVV--PLKDYQTHMADAGVLIG-RAFP---PADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CSS--CHHHHHHHHHHTTEECC-CCCT---TCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred CCC--CHHHHHHHHHHCCEEEe-ecCC---CCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 553 67889999999999987 4433 24689999984 899999999999998864
No 57
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=5.5e-32 Score=279.38 Aligned_cols=350 Identities=13% Similarity=0.143 Sum_probs=257.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC--CCEEEeCccH-
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK--PAAIVFGMGY- 171 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~~~i~~~sG~- 171 (489)
+..+|||+++.+-.....++.+.+++.+++++.+... ..++......+|++.+++++ |. ++.+++++|+
T Consensus 75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~ 150 (448)
T 3aow_A 75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKA----LQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQ 150 (448)
T ss_dssp TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHH----HSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHH
T ss_pred CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHH----hCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHH
Confidence 3568999754321111124678899988887632100 11122223478888888888 75 4666666554
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
+++..++.+++++||.|+++.++|.++...++..|++++.++.+ |+++|+++++....++ ++.++++++.
T Consensus 151 ~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~------~~~k~v~~~~ 224 (448)
T 3aow_A 151 QALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQG------KKVKVVYTVP 224 (448)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTT------CCEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccC------CCCeEEEECC
Confidence 56688899999999999999999999999999999999888764 7899999887311111 1234444677
Q ss_pred CcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEE
Q 046230 248 GIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIA 321 (489)
Q Consensus 248 ~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~ 321 (489)
..++++|.+.+ +++|+++|++||++||+||+|+ .+..+|........+++.+.+|+++||||+++ +| ||++
T Consensus 225 ~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~--~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~ 301 (448)
T 3aow_A 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYG--ELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMV 301 (448)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCT--TCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEE
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCc--cccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEE
Confidence 88999998876 6799999999999999999999 55555554333444444556789999999999 68 9999
Q ss_pred eCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCC
Q 046230 322 GSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM---GFEVLGDNDS 398 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~v~~~~~~ 398 (489)
+++++++.+........++ .|++.++++.++|+... ...+.++.++.++++.+++.+.|++. |+.+..+.++
T Consensus 302 ~~~~l~~~l~~~~~~~~~~--~~~~~q~a~~~~L~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g 376 (448)
T 3aow_A 302 GDPGIIRKMEIAKQSTDLC--TNVFGQVVAWRYVDGGY---LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGG 376 (448)
T ss_dssp ECHHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBS
T ss_pred eCHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCcc
Confidence 9999999887655443343 68888888888876310 01145677788889999999999885 6877666678
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++++.+....+..++.++|.++||.+.+.. |...+.+.+++||+++. .++++|++++++|.+++++.
T Consensus 377 ~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 377 MFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp SEEEEECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 8888888655567889999999999999843 32222346899999975 58999999999999998765
No 58
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.3e-31 Score=269.48 Aligned_cols=346 Identities=12% Similarity=0.049 Sum_probs=242.9
Q ss_pred cCCCCCeEEEeeccccCCcccccccCccc-----eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcch
Q 046230 72 SSAPDAWFDVVERFSNDSNKTLKRTNKVN-----RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLM 146 (489)
Q Consensus 72 ~~~~G~~i~~~dr~~~~~~~~~~~~~~g~-----~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (489)
.++.|+++||.+ |+ ++|||++++ .+++ .+|.+.+++.+++.+..... +..
T Consensus 10 ~~~~~~~~~d~~---------------~~~~~~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y-------~~~- 64 (390)
T 1d2f_A 10 RHGTWCTQWDYV---------------ADRFGTADLLPFTISD-MDFA-TAPCIIEALNQRLMHGVFGY-------SRW- 64 (390)
T ss_dssp -----------------------------------CEECCSSS-CSSC-CCHHHHHHHHHHHTTCCCCC-------CCS-
T ss_pred ccCCCccchhhh---------------ccccCCCCeeEeeecC-CCCC-CCHHHHHHHHHHHhCCCCCC-------CCC-
Confidence 467899999987 54 799997654 3455 45889999999886411111 111
Q ss_pred hHHH-HHHHHHHHh----C--C-CCEEEeCc-cHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---
Q 046230 147 VHNE-LEECVARFV----G--K-PAAIVFGM-GYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH--- 214 (489)
Q Consensus 147 ~~~~-l~~~la~~~----g--~-~~~i~~~s-G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--- 214 (489)
..+ +++.+|+++ | . ++.+++++ |++++..++.++.++|+.|+++.++|+++...++..|++++.++.
T Consensus 65 -~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 143 (390)
T 1d2f_A 65 -KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ 143 (390)
T ss_dssp -CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEEC
T ss_pred -ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccC
Confidence 345 777777775 4 2 34555555 556678888999999999999999999999999999999888875
Q ss_pred -----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 215 -----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 215 -----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
.|+++|++.+++ .++.+|++..+++++|.+.+ +++|+++|++||++||+||+|+ .+.+
T Consensus 144 ~~~~~~d~~~l~~~l~~------------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~ 209 (390)
T 1d2f_A 144 ADGWFCDMGKLEAVLAK------------PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHM--DMVW 209 (390)
T ss_dssp SSSEECCHHHHHHHHTS------------TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTT--TCBC
T ss_pred CCccccCHHHHHHHhcc------------CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc--cccc
Confidence 378888888753 12344555577999998876 8999999999999999999999 6666
Q ss_pred CCCccccccCCCCCCccEEEcccccccCCcc---eEEEeC-HHHHHHHHhhCC-CcccccCCCHHHHHHHHHHHHHHHcc
Q 046230 287 TGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKYTCP-AHLYATSISPPAAEQIISAIKVILGE 361 (489)
Q Consensus 287 ~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~-~~~~~~l~~~~~-~~~~~~~~~p~~~aa~~a~L~~i~~~ 361 (489)
+|.......++++...|+ ++||||++|.+| ||++++ +++++.+..... ...+ .+.+++.++++.++|+..
T Consensus 210 ~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~--- 284 (390)
T 1d2f_A 210 GEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGL-SSPSVLALTAHIAAYQQG--- 284 (390)
T ss_dssp SSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCC-CSCCHHHHHHHHHHHHHC---
T ss_pred CCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhccc-CCCCHHHHHHHHHHHhcC---
Confidence 665544444454321255 779999999768 999985 788888766543 2333 147888888888888742
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCeEEEEeCCC-CcHHHHHHHHh-hCCceEEeecCCCcCCCC
Q 046230 362 DGSSRGAQKLARIRENSNFFRSELQK-M-GFEVLGDNDSPVMPIMLYNP-AKIPAFSRECL-RQNVAVVTVAFPATPLLL 437 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~ 437 (489)
....++.+++++++.+++.+.|++ + ++.+..+.++.++++.+... ....++.+.|. ++||.+.+...+. +...
T Consensus 285 --~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~-~~~~ 361 (390)
T 1d2f_A 285 --APWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG-EEGR 361 (390)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC-GGGT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC-CCCC
Confidence 114577888899999999999998 5 77776665566666766542 45678999999 5799999743222 2345
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 438 ARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++||+++ .+++++++++++|.++++++
T Consensus 362 ~~~Ris~~--~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 362 GFVRLNAG--CPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp TEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 78999996 46899999999999998764
No 59
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.9e-32 Score=278.19 Aligned_cols=342 Identities=15% Similarity=0.126 Sum_probs=253.3
Q ss_pred cceeEecccc--cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCcc-HHHH
Q 046230 99 VNRCLNLGSY--NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMG-YVTN 174 (489)
Q Consensus 99 g~~~id~~s~--~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~ 174 (489)
++++|||+++ ++.++ .++.+.+++.+++++.+.... .++......++++.+++++|.+ +.+++++| ++++
T Consensus 31 ~~~~i~l~~g~~~~~~~--~~~~v~~a~~~~~~~~~~~~~----~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al 104 (397)
T 2zyj_A 31 RPGILSFAGGLPAPELF--PKEEAAEAAARILREKGEVAL----QYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQAL 104 (397)
T ss_dssp STTCEEESSCCCCGGGC--CHHHHHHHHHHHHHHHHHHHT----SCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHH
T ss_pred CCCceecCCCCCCchhC--CHHHHHHHHHHHHHhcchhhh----CCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHH
Confidence 4568999754 33332 357899999998876421100 1111223489999999999853 55666555 5566
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
..++.++.++|+.|+++.+.|+++...++..|++++.++.+ |+++|++.+++. +.+++++++.++
T Consensus 105 ~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~-----------~~~~v~~~~~~~ 173 (397)
T 2zyj_A 105 DLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRE-----------RPRFLYLIPSFQ 173 (397)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHC-----------CCSCEEECCBSC
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhc-----------CCeEEEECCCCc
Confidence 88888899999999999999999999999999998888763 789999988751 234444678889
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC---CccEEEcccccccCCcc---eEEE
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA---DVDIMMGTFTKSFGSCG---GYIA 321 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~---~~Di~~~t~sK~~g~~G---G~i~ 321 (489)
+++|.+.+ +++|+++|++||++||+||+|+ .+..+|........+.+. +.+++++|+||++| +| ||++
T Consensus 174 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~ 250 (397)
T 2zyj_A 174 NPTGGLTPLPARKRLLQMVMERGLVVVEDDAYR--ELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAV 250 (397)
T ss_dssp TTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTT--TCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcc--cccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEe
Confidence 99999877 5599999999999999999999 666655432222222221 23588899999999 68 9999
Q ss_pred eCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCC
Q 046230 322 GSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM---GFEVLGDNDS 398 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~v~~~~~~ 398 (489)
+++++++.+......+.++ .|++.++++.++|+... . ...++.+++++++.+++.+.|++. |+.+..+.++
T Consensus 251 ~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~---~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g 324 (397)
T 2zyj_A 251 AHPEALQKLVQAKQGADLH--TPMLNQMLVHELLKEGF---S-ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG 324 (397)
T ss_dssp CCHHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHTTTH---H-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBS
T ss_pred cCHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHhCC---H-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCcc
Confidence 9999999887655444344 68888888877776320 0 245677888889999999999885 6887666667
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++++.+.......++.+.|.++||.+.+.. |...+.+.+++||+++. .|++++++++++|.++++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 325 MFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYAT-LDREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp SEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Confidence 8888877655567889999999999999743 22222346899999975 48999999999999988764
No 60
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=9.3e-32 Score=271.07 Aligned_cols=330 Identities=15% Similarity=0.086 Sum_probs=248.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CCC---C-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GKP---A-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~---~-~i~~~sG 170 (489)
|+++|||+++.+ .++ .+|.+.+++.+++++.. ...++......++++.+|+++ |.+ + .+++++|
T Consensus 24 g~~~idl~~~~~-~~~-~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g 95 (376)
T 2dou_A 24 GVGLIDLSIGST-DLP-PPEAPLKALAEALNDPT------TYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG 95 (376)
T ss_dssp TCCCEECSSCCC-CCC-CCHHHHHHHHHHTTCGG------GSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred CCCEEeccCCCC-CCC-CCHHHHHHHHHHHhCCC------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 788999976653 444 35888888888875410 111223345678999999987 763 3 5666555
Q ss_pred -HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 -YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 -~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++|+.|+++.++|+++...++..|++++.++. .|+++|++.+.. +..+|
T Consensus 96 ~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v 162 (376)
T 2dou_A 96 SQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWR-------------EAKVL 162 (376)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH-------------HEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc-------------CceEE
Confidence 56678888899999999999999999999999999999988875 378899888864 23455
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc--
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G-- 317 (489)
++..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|.. ..+..+. .+.+++++||||++|.+|
T Consensus 163 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r 238 (376)
T 2dou_A 163 LLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYV--DQVYEGEAPSPLALPGA--KERVVELFSLSKSYNLAGFR 238 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG--GGBSSSCCCCGGGSTTG--GGTEEEEEEHHHHHTCGGGC
T ss_pred EECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccch--hcccCCCCCChhhcCCC--CCcEEEEecchhhcCChhhe
Confidence 55567899999876 7899999999999999999999 55555432 2222221 234788899999998778
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+......+.+ +.+++.++++.++|+.. ....++.+++++++.+++.+.|+++ +.+..+.
T Consensus 239 ~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 310 (376)
T 2dou_A 239 LGFALGSEEALARLERVKGVIDF--NQYAGVLRMGVEALKTP-----KEVVRGYARVYRERALGMAEALKGV-LSLLPPR 310 (376)
T ss_dssp CEEEEECHHHHHHHHHHHHHHCC--CSCHHHHHHHHHHHTSC-----HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCC
T ss_pred eEEEecCHHHHHHHHHHHHhccc--CCCHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCC
Confidence 9999999999988765443333 37888888888887642 1246778888999999999999988 7776555
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.+.++++.+.......++.+.|+++||.+.+...+. +.+.+++||+++ .+++++++++++|.+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~-~~~~~~~Ris~~--~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 311 ATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFG-PGGKGFVRIALV--RPLEELLEAAKRIREAL 375 (376)
T ss_dssp BSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGC-GGGTTEEEEECC--SCHHHHHHHHHHHHHTC
T ss_pred eeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhC-CCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 667777777655567789999999999999743222 224579999995 48999999999998754
No 61
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.4e-32 Score=279.04 Aligned_cols=351 Identities=16% Similarity=0.150 Sum_probs=255.2
Q ss_pred cceeEeccccc--ccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC----CCEEEeC
Q 046230 99 VNRCLNLGSYN--YLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK----PAAIVFG 168 (489)
Q Consensus 99 g~~~id~~s~~--~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~ 168 (489)
++++|||+++. +.+++ ++.+.+++.+++++.+..... ++......++++.+|+++ |. ++.++++
T Consensus 42 ~~~~idl~~g~~~~~~~~--~~~v~~a~~~~~~~~~~~~~~----y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t 115 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETFP--RKELAEIAKEIIEKEYHYTLQ----YSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFT 115 (425)
T ss_dssp STTCEECCCCSCCGGGSC--HHHHHHHHHHHHHHSHHHHTS----CCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEE
T ss_pred CCCceeCCCCCCCcccCC--HHHHHHHHHHHHhhcchhhcC----CCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEe
Confidence 46799997553 33333 578999999998763210001 111222378888888888 73 3566666
Q ss_pred cc-HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 169 MG-YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 169 sG-~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+| ++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.+++...+++ .++.+++
T Consensus 116 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~----~~~~~~v 191 (425)
T 1vp4_A 116 VGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGK----IKQVKFI 191 (425)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTC----GGGEEEE
T ss_pred ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhccc----CCCceEE
Confidence 65 555688888999999999999999999999999999998888763 88999998876321100 0113333
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
+++..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|........+++.+.+|+++||||++| +|
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~ 268 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYG--ALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRI 268 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSST--TCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCE
T ss_pred EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCc--cccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccce
Confidence 467888999998876 6799999999999999999999 66555543222222223345788999999999 68
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-----CCee
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-----GFEV 392 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~v 392 (489)
||+++++++++.+......+.++ .|++.++++.++|+... .....++.+++++++.+++.+.|++. |+.+
T Consensus 269 G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~ 343 (425)
T 1vp4_A 269 GMVAGSKEFIRKIVQAKQSADLC--SPAITHRLAARYLERYD---LLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKW 343 (425)
T ss_dssp EEEECCHHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHHHSC---HHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEE
T ss_pred EEEeeCHHHHHHHHHHhhhhcCC--CCHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEE
Confidence 99999999999887655443333 68899998888887520 01145677888899999999999885 6777
Q ss_pred eCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec-CCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 393 LGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA-FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
..+..++++++.+.......++.+.|.++||.+.+.. |...+.+.+++||+++. .|++++++++++|.++++++.
T Consensus 344 ~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~e~i~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 344 VKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL-PPDEKIVEGIKRLREVVLEYG 419 (425)
T ss_dssp CCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 6666688888887654445678999999999999743 32222346899999975 489999999999999987764
No 62
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.1e-31 Score=268.39 Aligned_cols=337 Identities=16% Similarity=0.113 Sum_probs=248.5
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC----CC-EEEeCcc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK----PA-AIVFGMG 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~-~i~~~sG 170 (489)
+++|||+++. ..++ .++.+.+++.+++++..... +......++++.+|+++ |. ++ .++.++|
T Consensus 26 ~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~y-------~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~ 96 (389)
T 1gd9_A 26 KDVISLGIGE-PDFD-TPQHIKEYAKEALDKGLTHY-------GPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGA 96 (389)
T ss_dssp SSCEECCCCS-CSSC-CCHHHHHHHHHHHHTTCCSC-------CCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESST
T ss_pred cCeEecCCCC-CCCC-CCHHHHHHHHHHHhCCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCCh
Confidence 3588987554 2344 35889999999987632111 11122367888888877 62 34 5556777
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++.++|+.|+++.++|+++...++..|++++.++.+ |+++|++.+++ +..+
T Consensus 97 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------------~~~~ 163 (389)
T 1gd9_A 97 NQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD-------------KTRA 163 (389)
T ss_dssp THHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT-------------TEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc-------------CceE
Confidence 888888899989999999999999999999999999999888753 67777776643 2345
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G-- 317 (489)
|+++++++++|.+.+ +++|+++|++||+++|+||+|+ .+..+|........+. ..+.|++++|+||++|.+|
T Consensus 164 v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 241 (389)
T 1gd9_A 164 LIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE--HFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR 241 (389)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhh--hcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccc
Confidence 566788899998875 9999999999999999999999 5555554111122221 1345899999999999778
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+........++ .+++.++++.++|+.... ....++.+++++++.+++.+.|+++|+.+..+.
T Consensus 242 ~G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 316 (389)
T 1gd9_A 242 LGFVAAPSWIIERMVKFQMYNATC--PVTFIQYAAAKALKDERS---WKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPK 316 (389)
T ss_dssp CEEEECCHHHHHHHHHHHTTTTCS--CCHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred eEEEEECHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHhCCCc---chHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC
Confidence 99999999999888765544444 788888888888764310 013467788899999999999999988876665
Q ss_pred CCCeEEEEeCC-CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 397 DSPVMPIMLYN-PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++.++++.+.. .....++.+.|+ ++||.+.+...+. +.+.+++||+++ .+++++++++++|.+++++..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRi~~~--~~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 317 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFG-KAGEGYVRISYA--TAYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp BTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGC-GGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHTT
T ss_pred eeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhcc
Confidence 56655555532 345778999998 8899999743322 224578999996 499999999999999987643
No 63
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-31 Score=270.60 Aligned_cols=333 Identities=14% Similarity=0.142 Sum_probs=245.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEe-Ccc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVF-GMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~-~sG 170 (489)
|+++|||+++.+ .++ .+|.+.+++.+++++.... +....|. .++++.+++++ |. ++.+++ ++|
T Consensus 29 g~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~---y~~~~g~----~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 99 (388)
T 1j32_A 29 GIDVCSFSAGEP-DFN-TPKHIVEAAKAALEQGKTR---YGPAAGE----PRLREAIAQKLQRDNGLCYGADNILVTNGG 99 (388)
T ss_dssp TCCCEECCCSSC-SSC-CCHHHHHHHHHHHHTTCCS---CCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred CCCEEECCCCCC-CCC-CCHHHHHHHHHHHhcCCCC---CCCCCCC----HHHHHHHHHHHHHhcCCCCChhhEEEcCCH
Confidence 788999976653 344 3578999999888652111 1111233 66777777766 32 344555 556
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++..+|+.|+++.+.|+++...++..|++++.++.+ |+++|++.+++ ++.+
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------------~~~~ 166 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-------------KTKL 166 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-------------TEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-------------CceE
Confidence 778888899889999999999999999999999999999888764 67777776643 3445
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC--CCccEEEcccccccCCcc-
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT--ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p--~~~Di~~~t~sK~~g~~G- 317 (489)
|+++++++++|.+.+ +++|+++|++||+++|+||+|+ .+..+|........+.+ .+.|++++|+||++|++|
T Consensus 167 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 244 (388)
T 1j32_A 167 LVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE--KILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGW 244 (388)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTT
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccch--hcccCCCCCCCHHHccccccCCEEEEeechhccCCccc
Confidence 666778899999855 9999999999999999999999 56555543222333322 235889999999998768
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG 394 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~ 394 (489)
||+++++++++.+........++ .+++.++++.++|+.. ..+.++.+++++++.+++.+.|+++ |+.+..
T Consensus 245 r~G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 317 (388)
T 1j32_A 245 RVGFLAGPVPLVKAATKIQGHSTSN--VCTFAQYGAIAAYENS-----QDCVQEMLAAFAERRRYMLDALNAMPGLECPK 317 (388)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCS--CCHHHHHHHHHHHHSC-----SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC
T ss_pred ceEEEEeCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCC-----cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence 99999999998887654433333 7888888888887631 2356788899999999999999998 888766
Q ss_pred CCCCCeEEEEeCC-CCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 395 DNDSPVMPIMLYN-PAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 395 ~~~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.++.++++.+.. .....++.+.|++ +||.+.+..... ..+++|++++ ++++++++++++|.++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 318 PDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG---ADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT---CTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC---CCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 6556554444432 2456789999987 699999743221 1478999985 79999999999999988764
No 64
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.5e-31 Score=275.11 Aligned_cols=340 Identities=13% Similarity=0.084 Sum_probs=245.9
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCC-------Ccc--cCCCcchhHHHHHHHHHHHhC----------CCCEEEeCccH
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTC-------SSR--VDGGTLMVHNELEECVARFVG----------KPAAIVFGMGY 171 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~-------~~~--~~~g~~~~~~~l~~~la~~~g----------~~~~i~~~sG~ 171 (489)
+|++.+ +.+.+++.+.+.+.+.... ..+ ..++......+|++++|++++ .+..+++++|+
T Consensus 43 lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~ 121 (435)
T 3piu_A 43 MGLAEN-QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGAT 121 (435)
T ss_dssp CSSCCC-CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHH
T ss_pred eccccc-cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChH
Confidence 555554 4557777777776543111 001 122223334789999999987 34566667778
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH-hcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+++..++.++.++|+.|+++.++|+++..++. ..|++++.++++ |+++|++++++....+ .++.+
T Consensus 122 ~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-------~~~~~ 194 (435)
T 3piu_A 122 SANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRN-------LRVKG 194 (435)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTT-------CCEEE
T ss_pred HHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcC-------CCeEE
Confidence 88899999999999999999999999988887 789999999875 7899999998753322 24456
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC----------CCccEEEcccc
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT----------ADVDIMMGTFT 310 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p----------~~~Di~~~t~s 310 (489)
|+++++++++|.+.+ +++|+++|++||++||+||+|+ .++++|........+.+ .+.+++++|||
T Consensus 195 v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~s 272 (435)
T 3piu_A 195 VLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYS--GTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLS 272 (435)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG--GGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESS
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCcCHHHhccccccccccCCCCCEEEEEeee
Confidence 677778899998866 6899999999999999999999 54555543222211111 23348889999
Q ss_pred cccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 311 K~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
|+||.+| ||+++ ++++++.+...... + ..+++.++++.+.|+...- .....++.+++++++.+++++.|+
T Consensus 273 K~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~ 346 (435)
T 3piu_A 273 KDLGLPGFRVGAIYSNDDMVVAAATKMSSF--G--LVSSQTQHLLSAMLSDKKL--TKNYIAENHKRLKQRQKKLVSGLQ 346 (435)
T ss_dssp SSSCCGGGCEEEEEESCHHHHHHHHHHGGG--S--CCCHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCceeEEEEEeCCHHHHHHHHHHhhc--C--CCCHHHHHHHHHHhcChHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999768 99998 57777777654332 2 2677777777776653200 001345678888999999999999
Q ss_pred hCCCeeeCCCCCCeEEEEeCCCC------cHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 387 KMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 387 ~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
+.|+.+..+..++++++.+.... ...++.++|+++ ||.+.+...+. +.+.+++||+++.. |++++++++++
T Consensus 347 ~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRi~~~~~-~~e~i~~~l~~ 424 (435)
T 3piu_A 347 KSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH-CTEPGWFRVCFANL-PERTLDLAMQR 424 (435)
T ss_dssp TTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT-CSSTTEEEEECSSS-CHHHHHHHHHH
T ss_pred hcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC-CCCCCEEEEEeeCC-CHHHHHHHHHH
Confidence 99998877777788888876432 456788999888 99999743222 34568999999544 99999999999
Q ss_pred HHHHHHHhC
Q 046230 460 ISRVGDLVG 468 (489)
Q Consensus 460 l~~~~~~~~ 468 (489)
|.++++++.
T Consensus 425 l~~~l~~~~ 433 (435)
T 3piu_A 425 LKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999988763
No 65
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-31 Score=272.94 Aligned_cols=338 Identities=15% Similarity=0.144 Sum_probs=244.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC-----CCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK-----PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~s 169 (489)
|+++|||+++. ..++ .+|.+.+++.+++++.... .++......++++.+|+++ |. +..+++++
T Consensus 36 g~~~idl~~g~-~~~~-~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g 107 (412)
T 2x5d_A 36 GEDIIDLSMGN-PDGP-TPPHIVEKLCTVAQREDTH------GYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG 107 (412)
T ss_dssp TCCCEECSSCC-CCSC-CCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred CCCEEecCCCC-CCCC-CCHHHHHHHHHHHhCCCCC------CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence 78899997654 3444 3578888888877653111 1111222378888888888 63 24555566
Q ss_pred cHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 170 GYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-------PSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 170 G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
|++++..++.++.++|+.|+++.+.|+++...++..|++++.++.++ +++|++.+.. +.++
T Consensus 108 ~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~------------~~~~ 175 (412)
T 2x5d_A 108 SKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIP------------KPRM 175 (412)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEES------------CCSE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhccc------------CceE
Confidence 67788888999999999999999999999999999999999888753 3344433321 2344
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc-
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G- 317 (489)
++ +..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|........++. .+.|++++|+||++|.+|
T Consensus 176 v~-l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 252 (412)
T 2x5d_A 176 MI-LGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYA--DIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGW 252 (412)
T ss_dssp EE-EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTS
T ss_pred EE-ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCCChhhccCccCcEEEEecCccccCCccc
Confidence 44 4566889998876 7899999999999999999999 55555532112222221 245899999999998668
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........+ +.+++.++++.++|+.. ..+.++.+++++++.+++.+.|+++|+.+..+
T Consensus 253 r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 325 (412)
T 2x5d_A 253 RIGFMVGNPELVSALARIKSYHDY--GTFTPLQVAAIAALEGD-----QQCVRDIARQYQQRRDVLVKGLREAGWMVENP 325 (412)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHSC-----SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred ceEEEEcCHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC
Confidence 9999999999988765433233 48888888888888742 23567888999999999999999888887666
Q ss_pred CCCCeEEEEeCCCC---cHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 396 NDSPVMPIMLYNPA---KIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 396 ~~~~~~~~~~~~~~---~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
.++.++++.+.... ...++.+.|++ +||.+.+...+. +.+.+++||+++. +++++++++++|.+++++++.
T Consensus 326 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~ 400 (412)
T 2x5d_A 326 KASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFG-DYGDDHVRFALIE--NRDRLRQAVRGIKAMFRADGL 400 (412)
T ss_dssp SBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTTC
T ss_pred CeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcCC
Confidence 55767777775433 56789999976 599999743322 2345799999964 899999999999999988653
No 66
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.1e-31 Score=272.14 Aligned_cols=341 Identities=17% Similarity=0.207 Sum_probs=249.8
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEe-Ccc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVF-GMG 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~-~sG 170 (489)
.++|||+++.+ .++ .+|.+.+++.+++.+.+.....+....|. .++++.+++++ |. ++ .+++ ++|
T Consensus 37 ~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~----~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~ 110 (429)
T 1yiz_A 37 YKPLNLGQGFP-DYH-APKYALNALAAAANSPDPLANQYTRGFGH----PRLVQALSKLYSQLVDRTINPMTEVLVTVGA 110 (429)
T ss_dssp HCCEECCSSSC-SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCC----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHH
T ss_pred CCEEEecCCCC-CCC-CCHHHHHHHHHHHhccccCccCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCcCCEEEecCh
Confidence 46899976543 444 35889999999987632111111111233 66777777775 52 23 4555 555
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHHHHhcCCCCC
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---------------NTPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~Le~~l~~~~~~g~~~~ 235 (489)
++++..++.++.++|+.|++..+.|+++...++..|++++.++. .|+++|++.++.
T Consensus 111 ~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------- 181 (429)
T 1yiz_A 111 YEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE--------- 181 (429)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---------
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---------
Confidence 77778889999999999999999999999999999999888764 267777776642
Q ss_pred CCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEccccc
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTK 311 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK 311 (489)
++.+|+++++++++|.+.+ +++|+++|++||++||+||+|+ .++++|.+......+. ..++|++++|+||
T Consensus 182 ----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK 255 (429)
T 1yiz_A 182 ----KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYE--HMVFEPFEHIRICTLPGMWERTITIGSAGK 255 (429)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTSCCCCGGGSTTTGGGEEEEEEHHH
T ss_pred ----CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecccc--ccccCCCCCcChhhccCCcCceEEEecchh
Confidence 3455666788999999875 9999999999999999999999 7666665422233332 2356899999999
Q ss_pred ccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc--cCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 312 SFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG--EDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 312 ~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
++|++| ||+++++++++.+........++ .+++.++++.++|+.... .......++.+++++++.+++.+.|+
T Consensus 256 ~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 333 (429)
T 1yiz_A 256 TFSLTGWKIGWAYGPEALLKNLQMVHQNCVYT--CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLA 333 (429)
T ss_dssp HHTCGGGCCEEEESCHHHHHHHHHHHHTTTCC--CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcceEEEEeCHHHHHHHHHHHhhcccC--CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999778 99999999999887654433344 788889888888886210 01133577888999999999999999
Q ss_pred hCCCeeeCCCCCCeEEEEeCCC------------CcHHHHHHHHh-hCCceEEee-cCCCcC---CCCCeEEEeecCCCC
Q 046230 387 KMGFEVLGDNDSPVMPIMLYNP------------AKIPAFSRECL-RQNVAVVTV-AFPATP---LLLARARICISASHT 449 (489)
Q Consensus 387 ~~g~~v~~~~~~~~~~~~~~~~------------~~~~~~~~~l~-~~Gi~v~~~-~~p~~~---~~~~~iRi~~~~~~t 449 (489)
++|+.+..+.+++++++.+... ....++.++|+ ++||.+.+. .|...+ .+.+++||+++ .+
T Consensus 334 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~ 411 (429)
T 1yiz_A 334 EVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KK 411 (429)
T ss_dssp HHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SC
T ss_pred hCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CC
Confidence 9898887666677888877643 34567888887 689999873 232211 12579999996 59
Q ss_pred HHHHHHHHHHHHHHHH
Q 046230 450 KEDLIKALEVISRVGD 465 (489)
Q Consensus 450 ~edid~~l~~l~~~~~ 465 (489)
+++|++++++|+++++
T Consensus 412 ~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 412 DENLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999988753
No 67
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-31 Score=269.89 Aligned_cols=324 Identities=20% Similarity=0.207 Sum_probs=242.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---C-CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---P-AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~-~~i~~~sG 170 (489)
|+++|||+++.+ .++. ++.+.+++.+++++..... +......++++.+|+++ |. + ..+++++|
T Consensus 40 g~~~i~l~~~~~-~~~~-~~~v~~a~~~~~~~~~~~y-------~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~ 110 (389)
T 1o4s_A 40 GEDVINLTAGEP-DFPT-PEPVVEEAVRFLQKGEVKY-------TDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGA 110 (389)
T ss_dssp TCCCEECCCSSC-SSCC-CHHHHHHHHHHHTTCCCCC-------CCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHH
T ss_pred CCCEEEccCCCC-CCCC-CHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCH
Confidence 678999976653 3443 5789999998886532111 11222377888888877 53 2 44445666
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.+++ ++.+
T Consensus 111 t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------------~~~~ 177 (389)
T 1o4s_A 111 KQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-------------KTKA 177 (389)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-------------TEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-------------CceE
Confidence 777888888889999999999999999999999999999888764 66777766643 3345
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc-
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
|+++++++++|.+.+ +++|+++|++||++||+||+|+ .+...|.. .....+ ..+.|++++||||++|.+|
T Consensus 178 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~--~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~ 253 (389)
T 1o4s_A 178 VLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYD--SLVYTDEFTSILDVSE--GFDRIVYINGFSKSHSMTGW 253 (389)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TSBCSSCCCCHHHHCS--SSTTEEEEEESTTTTTCGGG
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCCHhhcCC--CCCcEEEEeechhhcCCccc
Confidence 666788899999877 9999999999999999999999 55554432 222211 1345899999999998778
Q ss_pred --eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 318 --GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 318 --G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
||+++++++++.+........+ +.+++.++++.++|+. ..++.+++++++.+++.+.|+++|+.+..+
T Consensus 254 r~G~l~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 323 (389)
T 1o4s_A 254 RVGYLISSEKVATAVSKIQSHTTS--CINTVAQYAALKALEV--------DNSYMVQTFKERKNFVVERLKKMGVKFVEP 323 (389)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHTC--SCCHHHHHHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ceEEEEeCHHHHHHHHHHhhhccc--CCCHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence 9999999999888765443333 3778877777776542 157788999999999999999998887666
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 396 NDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.++.++++.+. ....++.++|+ ++||.+.+...+.. .+++|++++ .+++++++++++|.++++
T Consensus 324 ~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 324 EGAFYLFFKVR--GDDVKFCERLLEEKKVALVPGSAFLK---PGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp SBSSEEEEECS--SCHHHHHHHHHHHHCEECEEGGGGTC---TTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred CcceEEEEeCC--CCHHHHHHHHHHHCCEEEeCchhcCC---CCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 55666666664 45678999998 78999997432221 358999996 499999999999998764
No 68
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=7.3e-32 Score=278.49 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=250.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C-CCCEEEeCccHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G-KPAAIVFGMGYVT 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g-~~~~i~~~sG~~a 173 (489)
|+++|||+++ +.+++. +|.+.+++.+++.+++..... ..++......+|++++++++ + .++.+++++|+.+
T Consensus 68 ~~~~i~l~~g-~~~~~~-~~~v~~a~~~~~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~ 143 (449)
T 3qgu_A 68 DAKIISLGIG-DTTEPL-PKYIADAMAKAAAGLATREGY--SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKC 143 (449)
T ss_dssp TCCCEECSSC-CCCCCC-CHHHHHHHHHHHHGGGGSCCC--CCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHH
T ss_pred CCCEEEeeCC-CCCCCC-CHHHHHHHHHHHHhhccccCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHH
Confidence 7889999865 456653 589999999999875421111 12223344589999999998 4 3467777777766
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCe----------EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGAT----------IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~----------~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+..++.++.++||.|+++.++|.++...++..|++ ++.+++++.+.+...+.+. ++.++
T Consensus 144 al~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~- 212 (449)
T 3qgu_A 144 DIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA----------KRTDI- 212 (449)
T ss_dssp HHHHHHHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC----------CCCSE-
T ss_pred HHHHHHHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc----------CCCCE-
Confidence 63334888899999999999999999999999988 8888887543332212110 13444
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G-- 317 (489)
|+++.+++++|.+.+ +++|+++|++||++||+||+|+ .++.+|........++. .+++|+++||||++|.+|
T Consensus 213 v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~--~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 290 (449)
T 3qgu_A 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA--LYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVR 290 (449)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG--GGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchH--hhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccce
Confidence 444578999998876 8899999999999999999999 66666543222333321 345788999999999768
Q ss_pred -eEEEeCHHHHH--------HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 318 -GYIAGSKELIQ--------YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 318 -G~i~~~~~~~~--------~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
||+++++++++ .+....... ..+.+++.++++.++|+... ..+.++.+++++++.+++++.|+++
T Consensus 291 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 291 LGWTVVPKALKYANGEPVHADWNRVMTTC--FNGASNIVQAGGLACLQPEG----LKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp CEEEECCTTCBCTTSCBHHHHHHHHHHHS--CCCCCHHHHHHHHHHTSHHH----HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCHHHHhhhhhhHHHHHHHHhhcc--cCCCCHHHHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999988765 232222111 12478888888888876421 1156788899999999999999999
Q ss_pred CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
|+.+..+.+++++++.+. .....++++.|+++ ||.+.+...+. +.+.+++||++ ..|+++|++++++|++++++.
T Consensus 365 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~-~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 365 GFSVYGGDDAPYIWVGFP-GKPSWDVFAEILERCNIVTTPGSGYG-PAGEGFVRASA--FGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp TCCEEESSSSSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEEC--CSCHHHHHHHHHHHHHHHC--
T ss_pred CCeeeCCCCeeEEEEECC-CCCHHHHHHHHHHHCCEEEecchHhC-CCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHhc
Confidence 998877777888888887 55678899999887 99999744322 34568999996 569999999999999987543
No 69
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.1e-30 Score=266.58 Aligned_cols=340 Identities=14% Similarity=0.153 Sum_probs=250.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCc--chhHHHHHHHHHHHhCC---CCEEEeCccHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGT--LMVHNELEECVARFVGK---PAAIVFGMGYVT 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~---~~~i~~~sG~~a 173 (489)
|+++++|+++.+ + +.++.+.+++.++++++..........++. .+...++++.++++++. +..+++++|+++
T Consensus 26 g~~~i~l~~~~~-~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a 102 (420)
T 1t3i_A 26 GHPLVYLDNAAT-S--QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEA 102 (420)
T ss_dssp TEECEECBTTTC-C--CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHH
T ss_pred CCceEEecCCcc-C--CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHH
Confidence 678899876554 2 346899999999998754221111111222 35678999999999998 455666777888
Q ss_pred HHHhHhhh----cCCCCEEEEcCCCchH----HHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 174 NSAILPVL----MRKGSLIISDSLNHNS----IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 174 ~~~~~~al----~~~g~~Vl~~~~~h~~----~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
+..++.++ .++|+.|+++.+.|++ +...++..|++++.++.+ |+++|++++++ +
T Consensus 103 ~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------------~ 169 (420)
T 1t3i_A 103 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-------------K 169 (420)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-------------T
T ss_pred HHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-------------C
Confidence 88888888 7899999999999998 445566779998888763 78888877743 3
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GY 319 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~ 319 (489)
+.+|+++++++++|.+.++++|.++|++||+++|+||+|+.|.... +.... ++|+++.|++|.+|+.| |+
T Consensus 170 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~------~~~~~---~~di~~~s~sK~~~~~g~G~ 240 (420)
T 1t3i_A 170 TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL------DVQLI---DCDWLVASGHKMCAPTGIGF 240 (420)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC------CHHHH---TCSEEEEEGGGTTSCTTCEE
T ss_pred ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC------chhhc---CCCEEEEehhhhcCCCceEE
Confidence 4577788999999999999999999999999999999999553211 11111 23899999999888877 99
Q ss_pred EEeCHHHHHHHHhhCCCc------------------ccccCCCHHHHHHHHH-HHHHHHccCCCchHHHHHHHHHHHHHH
Q 046230 320 IAGSKELIQYLKYTCPAH------------------LYATSISPPAAEQIIS-AIKVILGEDGSSRGAQKLARIRENSNF 380 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~~------------------~~~~~~~p~~~aa~~a-~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
+++++++++.+......+ .+..+.+++.+++++. +++.+... ..++.+++++++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~----~~~~~~~~~~~~~~~ 316 (420)
T 1t3i_A 241 LYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDL----GMENIHNYEVELTHY 316 (420)
T ss_dssp EEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHH
T ss_pred EEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHH
Confidence 999999988876543321 1222344555544444 77776310 347788999999999
Q ss_pred HHHHHHhC-CCeeeCCC-----CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC----CC-CCeEEEeecCCCC
Q 046230 381 FRSELQKM-GFEVLGDN-----DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP----LL-LARARICISASHT 449 (489)
Q Consensus 381 l~~~L~~~-g~~v~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~----~~-~~~iRi~~~~~~t 449 (489)
+.+.|+++ |+.+..+. .+.++.+.+.. ....++.+.|.++||.+.+...+..+ .+ .+++||+++..+|
T Consensus 317 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~ 395 (420)
T 1t3i_A 317 LWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG-LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNT 395 (420)
T ss_dssp HHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT-BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCC
T ss_pred HHHHHHhCCCeEEeCCCccccccCCEEEEEECC-CCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCC
Confidence 99999998 88877654 36677666643 35678899999999999864322211 12 5789999988889
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 046230 450 KEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 450 ~edid~~l~~l~~~~~~~~ 468 (489)
++|+++++++|+++++.++
T Consensus 396 ~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 396 KEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 70
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.6e-31 Score=269.26 Aligned_cols=338 Identities=14% Similarity=0.085 Sum_probs=254.6
Q ss_pred ccceeEecccccccC--CCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEEeC
Q 046230 98 KVNRCLNLGSYNYLG--FAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIVFG 168 (489)
Q Consensus 98 ~g~~~id~~s~~~lg--~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~ 168 (489)
.++++|||+++++.. -...++.+.+++.+++.+.... .++......++++.+|++++ .++.++++
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~ 125 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN------GYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTS 125 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS------SCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEES
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC------CCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEec
Confidence 378899998766442 2223688999999988873211 11222334899999999998 23455556
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+|++++..++.++.++|+.|+++.++|..+...++..|++++.++.+ |+++|++.+++ ++
T Consensus 126 g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~ 192 (427)
T 3dyd_A 126 GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-------------KT 192 (427)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT-------------TE
T ss_pred CcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc-------------CC
Confidence 67788888999999999999999999999999999999998887753 67777776643 23
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
.+|++..+++++|.+.+ +++|+++|++||+++|+||+|+ .++++|........+.+....|+++||||.|+.+|
T Consensus 193 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~--~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~ 270 (427)
T 3dyd_A 193 ACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYG--DMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGW 270 (427)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTT--TCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGG
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCch--hhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCc
Confidence 45555666899999999 9999999999999999999999 77777754333333333222477899999998888
Q ss_pred --eEEEeC-------HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 318 --GYIAGS-------KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 318 --G~i~~~-------~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
||++++ +++++.+...... .+ +.+++.++++.++|+.. ...+.++.+++++++.+++.+.|+++
T Consensus 271 riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~--~~~~~~~~a~~~~L~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (427)
T 3dyd_A 271 RLGWILIHDRRDIFGNEIRDGLVKLSQR-IL--GPCTIVQGALKSILCRT----PGEFYHNTLSFLKSNADLCYGALAAI 343 (427)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHH-HC--CSCHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ceEEEEecCcchhhHHHHHHHHHHHHhc-cC--CCCHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999886 5677777654321 23 38889999999988743 11256778899999999999999998
Q ss_pred -CCeeeCCCCCCeEEEEeCC-----CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 389 -GFEVLGDNDSPVMPIMLYN-----PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 389 -g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
|+.+..+.+++++++.+.. .....+++++|+ ++||.+.+...+. ..+++||+++ +++++|++++++|.
T Consensus 344 ~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~---~~~~iRis~~--~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 344 PGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE---YPNFIRVVIT--VPEVMMLEACSRIQ 418 (427)
T ss_dssp TTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT---CTTEEEEESC--SCHHHHHHHHHHHH
T ss_pred CCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC---CCCeEEEEEC--CCHHHHHHHHHHHH
Confidence 8887767778777776642 245678888886 6799999744322 2579999984 89999999999999
Q ss_pred HHHHHhC
Q 046230 462 RVGDLVG 468 (489)
Q Consensus 462 ~~~~~~~ 468 (489)
++++++.
T Consensus 419 ~~l~~~~ 425 (427)
T 3dyd_A 419 EFCEQHY 425 (427)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988764
No 71
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=7.1e-31 Score=265.10 Aligned_cols=330 Identities=18% Similarity=0.155 Sum_probs=245.4
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAIL 178 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~ 178 (489)
.+|||+++.. .++ .++.+.+++.+++++ ... ++......++++.++++++.+ +.++.++|++++..++
T Consensus 26 ~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~-~~~-------y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~ 95 (381)
T 1v2d_A 26 GAVNLGQGFP-SNP-PPPFLLEAVRRALGR-QDQ-------YAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLL 95 (381)
T ss_dssp TCEECCCCSC-SSC-CCHHHHHHHHHHTTT-SCS-------CCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHH
T ss_pred CeEEecCCCC-CCC-CCHHHHHHHHHHHHH-hcC-------CCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHH
Confidence 4789875532 344 357889999888765 211 122223489999999999864 4555566778888888
Q ss_pred hhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 179 PVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 179 ~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++..+|+.|+++.++|+++...++..|++++.++.+ |+++|++.+.. +..+|++++++
T Consensus 96 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~ 162 (381)
T 1v2d_A 96 QSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTP-------------RTRALLLNTPM 162 (381)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCT-------------TEEEEEEESSC
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCc-------------CCEEEEECCCC
Confidence 8888999999999999999999899999999888764 67787776632 34556667889
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCH
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK 324 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~ 324 (489)
+++|.+.+ +++|+++|++||+++|+||+|+.+.+|..+...... ..++|++++|+||++|.+| ||+++++
T Consensus 163 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~----~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 238 (381)
T 1v2d_A 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF----APERTFTVGSAGKRLEATGYRVGWIVGPK 238 (381)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH----CTTTEEEEEEHHHHTTCGGGCCEEEECCT
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh----cCCCEEEEeechhhcCCcccceEEEEeCH
Confidence 99999876 899999999999999999999933334333332222 1345899999999998777 9999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM 404 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~ 404 (489)
++++.+........+ +.+++.++++.++|+... .....++.+++++++.+++.+.|++.|+.+..+.+++++++.
T Consensus 239 ~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 313 (381)
T 1v2d_A 239 EFMPRLAGMRQWTSF--SAPTPLQAGVAEALKLAR---REGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAE 313 (381)
T ss_dssp TTHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEE
T ss_pred HHHHHHHHHHhhccc--CCCcHHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEe
Confidence 998888754432223 378888888888888541 022567889999999999999999999988776667777776
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPAT-PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+... + +.+.|.++||.+.+...+.. +.+.+++||+++. +++++++++++|.+++++..
T Consensus 314 ~~~~-~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r 372 (381)
T 1v2d_A 314 LPGW-D---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNSPR 372 (381)
T ss_dssp CTTC-C---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC----
T ss_pred cChH-h---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhcc
Confidence 6543 2 66777889999997432221 2346799999964 99999999999999876643
No 72
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.7e-31 Score=269.97 Aligned_cols=332 Identities=17% Similarity=0.134 Sum_probs=247.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--------CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--------PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~sG 170 (489)
|+++|||+++.+ +++ .++.+.+++ +++++..... +......++++.++++++. ++.+++++|
T Consensus 42 g~~~i~l~~~~~-~~~-~~~~v~~a~-~~l~~~~~~y-------~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 111 (409)
T 2gb3_A 42 GVRIHHLNIGQP-DLK-TPEVFFERI-YENKPEVVYY-------SHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGG 111 (409)
T ss_dssp TCEEEECSSCCC-CSC-CCTHHHHHH-HHTCCSSCCC-------CCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHH
T ss_pred CCCEEeccCCCC-CCC-CCHHHHHHH-HHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCH
Confidence 788999987654 444 357888888 8775421111 1122236888888888742 355566777
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC------HHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT------PSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d------~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++|+.|+++.++|.++...++..|++++.++.++ +++|++.+++ ++.+|
T Consensus 112 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~-------------~~~~v 178 (409)
T 2gb3_A 112 SEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINE-------------RTKGI 178 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCT-------------TEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCc-------------CCeEE
Confidence 8888888899999999999999999999999999999999988763 5566655532 34456
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---e
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
+++++++++|.+.+ +++|+++|++||++||+||+|+ .+..+|+......++ .+.|++++||||++|.+| |
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~--~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G 254 (409)
T 2gb3_A 179 VLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYS--EIVFRGEFASALSIE--SDKVVVIDSVSKKFSACGARVG 254 (409)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCSSCCCCGGGSC--CTTEEEEEESTTTTTCGGGCCE
T ss_pred EECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECccc--ccccCCCCCCccccC--CCCEEEEecchhccCCccceEE
Confidence 66788899998854 8999999999999999999999 555554322112222 234899999999998777 9
Q ss_pred EEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-eCCC
Q 046230 319 YIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV-LGDN 396 (489)
Q Consensus 319 ~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v-~~~~ 396 (489)
++++++ ++++.+......++ +.+++.++++.++|+.. ....++.+++++++.+++.+.|+++|+.+ ..+.
T Consensus 255 ~~~~~~~~l~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 326 (409)
T 2gb3_A 255 CLITRNEELISHAMKLAQGRL---APPLLEQIGSVGLLNLD-----DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPS 326 (409)
T ss_dssp EEECSCHHHHHHHHHHHHHSC---CCCHHHHHHHHHHHTCC-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCS
T ss_pred EEEECcHHHHHHHHHHHhccC---CCCHHHHHHHHHHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCC
Confidence 999998 99988876543332 48888888888887531 12467788889999999999999988877 5555
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHhhC------CceEEeec-CCC-cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 397 DSPVMPIMLYNPAKIPAFSRECLRQ------NVAVVTVA-FPA-TPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~l~~~------Gi~v~~~~-~p~-~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++.++++.+. .....++.++|+++ ||.+.+.. |.. .+.+.+++||+++ +|++++++++++|+++++++.
T Consensus 327 ~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 327 GAFYITAELP-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp BSSEEEEECS-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEeC-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 5666666665 34577899999987 99999732 221 1234689999986 899999999999999988763
No 73
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.6e-30 Score=264.12 Aligned_cols=339 Identities=15% Similarity=0.137 Sum_probs=245.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCc--ccCCCcchhHHHHHHHHHHHhCC--CCEEEe-CccHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSS--RVDGGTLMVHNELEECVARFVGK--PAAIVF-GMGYVT 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~--~~~~g~~~~~~~l~~~la~~~g~--~~~i~~-~sG~~a 173 (489)
|+.+++|..+.. + +.++.+.+++.++++++......+ ...+...+...++++.++++++. ++.+++ ++|+++
T Consensus 21 g~~~i~l~~~~~-~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a 97 (406)
T 1kmj_A 21 GLPLAYLDSAAS-A--QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG 97 (406)
T ss_dssp TEECEECCTTTC-C--CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHH
T ss_pred CCceEEecCCcc-C--CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHH
Confidence 555666543322 2 346889999999998753221111 11112356678999999999998 345555 666688
Q ss_pred HHHhHhhh----cCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 174 NSAILPVL----MRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 174 ~~~~~~al----~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
+..++.++ .++|+.|+++.+.|++... .++..|++++.++.+ |+++|++.+.+ +
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-------------~ 164 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE-------------K 164 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-------------T
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-------------C
Confidence 88888888 7899999999999887543 356679998888764 68888887753 4
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GY 319 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~ 319 (489)
+.+|+++++++++|.+.++++|.++|++||+++|+||+|+.|.. . .+.... ++|++++|++|.+|++| |+
T Consensus 165 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~---~---~~~~~~---~~d~~~~s~~K~~g~~G~G~ 235 (406)
T 1kmj_A 165 TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHH---P---VDVQAL---DCDFYVFSGHKLYGPTGIGI 235 (406)
T ss_dssp EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTS---C---CCHHHH---TCSEEEEEGGGTTSCTTCEE
T ss_pred CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCC---C---Cccccc---CCCEEEEEchhccCCCCcEE
Confidence 56778899999999999999999999999999999999985432 1 111112 23999999999999888 99
Q ss_pred EEeCHHHHHHHHhhCCCc-------------------ccccCCCHHHHHHHH-HHHHHHHccCCCchHHHHHHHHHHHHH
Q 046230 320 IAGSKELIQYLKYTCPAH-------------------LYATSISPPAAEQII-SAIKVILGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~~-------------------~~~~~~~p~~~aa~~-a~L~~i~~~~~~~~~~~~~~~~~~~~~ 379 (489)
+++++++++.+.....+. .+..+.+++.+++++ ++++.+... ..++.+++++++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~----~~~~~~~~~~~~~~ 311 (406)
T 1kmj_A 236 LYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL----GLNNIAEYEQNLMH 311 (406)
T ss_dssp EEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHH
T ss_pred EEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHc----CHHHHHHHHHHHHH
Confidence 999999998876543221 121223444444444 788876311 34678889999999
Q ss_pred HHHHHHHhC-CCeeeCCC-CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC-----CCCCeEEEeecCCCCHHH
Q 046230 380 FFRSELQKM-GFEVLGDN-DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP-----LLLARARICISASHTKED 452 (489)
Q Consensus 380 ~l~~~L~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~-----~~~~~iRi~~~~~~t~ed 452 (489)
++.+.|+++ |+.+..+. .+.++.+.+. .....++.+.|.++||.+.+......+ ...+++||+++..+|++|
T Consensus 312 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~ 390 (406)
T 1kmj_A 312 YALSQLESVPDLTLYGPQNRLGVIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEE 390 (406)
T ss_dssp HHHHHHTTSTTEEEESCTTCCSEEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHH
T ss_pred HHHHHHhcCCCeEEecCCCcCCEEEEEEC-CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHH
Confidence 999999998 88877652 4666666654 335678899999999999874432211 114789999998889999
Q ss_pred HHHHHHHHHHHHHHh
Q 046230 453 LIKALEVISRVGDLV 467 (489)
Q Consensus 453 id~~l~~l~~~~~~~ 467 (489)
+++++++|+++++.+
T Consensus 391 i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 391 VDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998765
No 74
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=3.6e-31 Score=269.69 Aligned_cols=334 Identities=14% Similarity=0.107 Sum_probs=248.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CCC----CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GKP----AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~----~~i~~~sG 170 (489)
|+++|||+++.+ .++ .+|.+.+++.+++++... ..++......++++.+|+++ |.+ +.+++++|
T Consensus 46 g~~~idl~~g~~-~~~-~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G 117 (404)
T 2o1b_A 46 PLPLINMAVGIP-DGP-TPQGIIDHFQKALTIPEN------QKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYG 117 (404)
T ss_dssp SSCCEECCCCSC-SSC-CCHHHHHHHHHHTTCHHH------HSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESS
T ss_pred CCCEEecCCcCC-CCC-CCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCC
Confidence 678999976643 344 357889998888743100 00111122377888888887 753 45666555
Q ss_pred -HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 -YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 -~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.++. +..+
T Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------------~~~~ 184 (404)
T 2o1b_A 118 TKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID-------------KTKL 184 (404)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH-------------HEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc-------------CceE
Confidence 566788899999999999999999999999999999999888753 67888888864 2345
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G-- 317 (489)
|++..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|+. .....+. ..+.|++++||||+||.+|
T Consensus 185 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 261 (404)
T 2o1b_A 185 IYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYG--AFGFDAKN-PSILASENGKDVAIEIYSLSKGYNMSGFR 261 (404)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTT--TCBSSSCC-CCGGGSTTHHHHEEEEEESTTTTTCGGGC
T ss_pred EEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccch--hcccCCCC-CChhhcCCCCCCEEEEEecchhccCchhh
Confidence 555677889999875 7899999999999999999999 55554432 1122221 1245789999999998768
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+......+.+ +.+++.++++.++|+.. ....++.+++++++.+++.+.|+++|+.+..+.
T Consensus 262 ~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 334 (404)
T 2o1b_A 262 VGFAVGNKDMIQALKKYQTHTNA--GMFGALQDAAIYALNHY-----DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAK 334 (404)
T ss_dssp CEEEEECHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCC
T ss_pred eEeEecCHHHHHHHHHHHhhccC--CCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence 9999999999988765443333 48889998888888752 125677888899999999999999988877666
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.++++.+.......++.++|++ +||.+.+...+. +.+.+++||+++. +++++++++++|.+++++
T Consensus 335 ~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~-~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 335 GGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFG-ENGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp BSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGC-GGGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred cceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhC-cCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 666677777655566789999884 699999743222 2245799999964 889999999999887654
No 75
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8.7e-31 Score=265.38 Aligned_cols=330 Identities=15% Similarity=0.141 Sum_probs=243.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC-------C-CCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG-------K-PAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~-~~~i~~~sG 170 (489)
|+++|||+++. ..++. +|.+.+++.+++.+..... +......++++.++++++ . +..+++++|
T Consensus 30 g~~~i~l~~g~-~~~~~-~~~v~~a~~~~~~~~~~~y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~ 100 (391)
T 3h14_A 30 GRRIIHMEVGQ-PGTGA-PRGAVEALAKSLETDALGY-------TVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGS 100 (391)
T ss_dssp TCCCEECCCSS-CSSCS-CHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSH
T ss_pred CCCeEEccCCC-CCCCC-CHHHHHHHHHHHhcCCCCC-------CCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecCh
Confidence 78999998654 33443 5789999988886522111 111223677777777763 2 345555667
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++. +.+ +
T Consensus 101 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---------------~~~-~ 164 (391)
T 3h14_A 101 SGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---------------DLA-G 164 (391)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---------------CCS-E
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---------------CCe-E
Confidence 777888899999999999999999999999999999999998876 55555443 133 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
|+++++++++|.+.+ +++|+++|++||+++|+||+|+ .+..+|... ..... .+.+++++|+||++|.+|
T Consensus 165 v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~G~r~ 239 (391)
T 3h14_A 165 LMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH--GIEYEAKAV-TALEL--TDECYVINSFSKYFSMTGWRV 239 (391)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCTTSCC
T ss_pred EEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch--hcccCCCCc-Chhhc--CCCEEEEEechhccCCcccee
Confidence 555678899999987 8999999999999999999999 666655431 11222 233688999999998668
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-eCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEV-LGDN 396 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v-~~~~ 396 (489)
||+++++++++.+......+.++ .+++.++++.++|+. ....++.+++++++.+++.+.|+++++.. ..+.
T Consensus 240 G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 311 (391)
T 3h14_A 240 GWMVVPEDQVRVVERIAQNMFIC--APHASQVAALAALDC------DAELQANLDVYKANRKLMLERLPKAGFTRIAPPD 311 (391)
T ss_dssp EEEECCGGGHHHHHHHHHHTTCC--CCHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCC
T ss_pred EEEEeCHHHHHHHHHHHhhhccC--CCHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC
Confidence 99999999999887655443333 788888888888761 12567888999999999999999987765 3445
Q ss_pred CCCeEEEEeCC-CCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 397 DSPVMPIMLYN-PAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++.++++.+.. .....++.+.|+++ ||.+.+...+..+.+.+++||+++. +++++++++++|.+++++..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 312 GAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp BTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC-
T ss_pred eeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 56677776654 45678899998886 9999984443333456899999964 89999999999999987654
No 76
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-30 Score=263.42 Aligned_cols=330 Identities=15% Similarity=0.217 Sum_probs=244.1
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEe-Ccc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVF-GMG 170 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~-~sG 170 (489)
..+|||+++.+ .++ .+|.+.+++.+++++.... +....|. .++++.+++++ |. ++ .+++ ++|
T Consensus 30 ~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~---y~~~~g~----~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~ 100 (386)
T 1u08_A 30 HQAINLSQGFP-DFD-GPRYLQERLAHHVAQGANQ---YAPMTGV----QALREAIAQKTERLYGYQPDADSDITVTAGA 100 (386)
T ss_dssp TTCEECCCSSC-SSC-CCHHHHHHHHHHHHTTCCS---CCCTTCC----HHHHHHHHHHHHHHHSCCCCTTTTEEEESSH
T ss_pred CCeEEecCCCC-CCC-CCHHHHHHHHHHHHhhccC---CCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCCEEEcCCh
Confidence 45889976543 444 3588999999988752111 1111133 67777777774 52 23 4555 556
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++|+.|+++.+.|+++...++..|++++.++.+ |+++|++.+.. +..+|
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------------~~~~v 167 (386)
T 1u08_A 101 TEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSE-------------RTRLV 167 (386)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCT-------------TEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcc-------------cCEEE
Confidence 677788888889999999999999999999999999999888763 67888877642 34455
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEcccccccCCcc---
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~sK~~g~~G--- 317 (489)
+++++++++|.+.+ +++|+++|++||+++|+||+|+ .+..+|........+. ..+.|++++|+||++|++|
T Consensus 168 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 245 (386)
T 1u08_A 168 ILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYE--HINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKV 245 (386)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTT--TCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCC
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEcccc--ccccCCCCCcChhcccCccCcEEEEecchhhcCCcccce
Confidence 66688999999876 7999999999999999999999 6666554322222221 1234899999999999778
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND 397 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 397 (489)
||+++++++++.+........++ .+++.++++.++|+.. ....++.+++++++.+++.+.|+++|+.+..+.+
T Consensus 246 G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 318 (386)
T 1u08_A 246 GYCVAPAPISAEIRKVHQYLTFS--VNTPAQLALADMLRAE-----PEHYLALPDFYRQKRDILVNALNESRLEILPCEG 318 (386)
T ss_dssp EEEECCHHHHHHHHHHHHHHTSS--CCHHHHHHHHHHHHHC-----THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCB
T ss_pred EEEEcCHHHHHHHHHHHHhhccC--CChHHHHHHHHHHhCC-----cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCc
Confidence 99999999999887654332333 7888888888888753 2256778899999999999999998988876666
Q ss_pred CCeEEEEeCCC--CcHHHHHHHHh-hCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 398 SPVMPIMLYNP--AKIPAFSRECL-RQNVAVVTV-AFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 398 ~~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
++++++.+... ....++.++|+ ++||.+.+. .|...+.+.+++||+++ .++++|++++++|.+
T Consensus 319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 77888777643 45778888887 579999974 34333345689999995 599999999999853
No 77
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.98 E-value=1.9e-30 Score=266.78 Aligned_cols=336 Identities=13% Similarity=0.040 Sum_probs=249.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhC-CCCCCcccCCCcchhHHHHHHHHHHHhC-------CCCEEE-eCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYS-PSTCSSRVDGGTLMVHNELEECVARFVG-------KPAAIV-FGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~-~~s 169 (489)
|+++|||+++.+ .++ .+|.+.+++.+++.+.. ... +......++++.+|++++ .++.++ +++
T Consensus 43 g~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~y-------~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g 113 (437)
T 3g0t_A 43 GTKFCRMEMGVP-GLP-APQIGIETEIQKLREGVASIY-------PNLDGLPELKQEASRFAKLFVNIDIPARACVPTVG 113 (437)
T ss_dssp TCCCEECCCCSC-CSC-CCHHHHHHHHHHHHHTGGGSC-------CCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESH
T ss_pred CCCEEeccCcCC-CCC-CCHHHHHHHHHHHhCCcCcCC-------CCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCC
Confidence 788999987653 344 35889999999987511 111 111223688888888876 234444 455
Q ss_pred cHHHHHHhHhhhc--CCCC--EEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 170 GYVTNSAILPVLM--RKGS--LIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 170 G~~a~~~~~~al~--~~g~--~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
|++++..++.++. ++|+ .|+++.++|.++...++..|++++.++.+ |+++|+++++. ++
T Consensus 114 ~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~ 182 (437)
T 3g0t_A 114 SMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQT-----------GQ 182 (437)
T ss_dssp HHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT-----------TC
T ss_pred HHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc-----------CC
Confidence 6667788889988 9999 99999999999999999999999888764 67888887743 13
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-c-------ccccCCCCCCccEEEcc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-V-------CELLEVDTADVDIMMGT 308 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~-------~~~~~v~p~~~Di~~~t 308 (489)
.+++++ ..+++++|.+.+ +++|+++|++||++||+||+|+ .+...+.. . ....+ ..+.+++++|
T Consensus 183 ~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s 257 (437)
T 3g0t_A 183 FCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF--GMDFRKDYSHPGEPLYQPSVAN--YTDNYILALS 257 (437)
T ss_dssp CCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCCTTSCCCSTTSSCCCCCGGG--TCSCEEEEEE
T ss_pred ceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh--hcccCCCcCcccccchhhccCC--CCCcEEEEEc
Confidence 444444 455899999877 7889999999999999999999 43333322 2 12211 1344788999
Q ss_pred cccccCCcc---eEEEeCHHHHH-H-----------------HHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchH
Q 046230 309 FTKSFGSCG---GYIAGSKELIQ-Y-----------------LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRG 367 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~~~~~~~-~-----------------l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~ 367 (489)
+||.+|.+| ||+++++++++ . +........ .+.+++.++++.++|+.... .....
T Consensus 258 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~--~~~~~ 333 (437)
T 3g0t_A 258 SSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALS--SGATHSAQWGMAAMLKACND--GEYNF 333 (437)
T ss_dssp STTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHH--SSSCHHHHHHHHHHHHHHHT--TSCCH
T ss_pred CccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhc--CCCCHHHHHHHHHHHhCcHh--HHHHH
Confidence 999999768 99999999888 6 544333222 34889999999999887521 11127
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeee------CC-CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeE
Q 046230 368 AQKLARIRENSNFFRSELQKMGFEVL------GD-NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARA 440 (489)
Q Consensus 368 ~~~~~~~~~~~~~l~~~L~~~g~~v~------~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~i 440 (489)
++.+++++++.+++.+.|+++|+.+. .+ ..++++++.+. .....++.+.|.++||.+.+...+.. ...+.+
T Consensus 334 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~-~~~~~i 411 (437)
T 3g0t_A 334 RDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGS-KRNEAM 411 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET-TCCHHHHHHHHHHTTEECEESTTTTC-CCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC-CCCHHHHHHHHHHcCeEEeeccccCC-CCCCEE
Confidence 88999999999999999999998877 23 66778888776 55678999999999999997443322 223679
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 441 RICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 441 Ri~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
|++++ ..|++++++++++|.+++++
T Consensus 412 Ris~~-~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 412 RICTS-LLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEECS-SSCGGGHHHHHHHHHHHHHH
T ss_pred EEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 99997 44999999999999988753
No 78
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.98 E-value=4.2e-30 Score=257.61 Aligned_cols=317 Identities=15% Similarity=0.107 Sum_probs=243.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 176 (489)
++++|||+++.. .++ .+|.+.+++.+++..+... ......+++++++++++.+ ..++.++|++++..
T Consensus 31 ~~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~y---------~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~ 99 (363)
T 3ffh_A 31 LTKITKLSSNEN-PLG-TSKKVAAIQANSSVETEIY---------PDGWASSLRKEVADFYQLEEEELIFTAGVDELIEL 99 (363)
T ss_dssp CSCCEECSSCSC-TTC-CCHHHHHHHHTCBSCCCBC-------------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCceEEccCCCC-CCC-CCHHHHHHHHHHHHHhhcC---------CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHH
Confidence 467999986632 233 2477777777765432111 1233489999999999953 44555666777888
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.+++ ++.+|+++++++
T Consensus 100 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~~p~n 166 (363)
T 3ffh_A 100 LTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDE-------------KTTIVWICNPNN 166 (363)
T ss_dssp HHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCT-------------TEEEEEEESSCT
T ss_pred HHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhccc-------------CCCEEEEeCCCC
Confidence 889999999999999999999999999999999999887 88898887753 345666678899
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEcccccccccCCCCc--cccccCCCCCCccEEEcccccccCCcc---eEEEeCH
Q 046230 252 MEGELCKFPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRG--VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSK 324 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~--~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~ 324 (489)
++|.+.+++++.++++.+ |+++|+||+|+ .++. |.. .....+. .+.+|+++||||.+|.+| ||+++++
T Consensus 167 ptG~~~~~~~l~~l~~~~~~~~~li~De~~~--~~~~-~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 241 (363)
T 3ffh_A 167 PTGNYIELADIQAFLDRVPSDVLVVLDEAYI--EYVT-PQPEKHEKLVRT--YKNLIITRTFSKIYGLASARVGYGIADK 241 (363)
T ss_dssp TTCCCCCHHHHHHHHTTSCTTSEEEEECTTG--GGCS-SCCCCCGGGGGT--CTTEEEEEESSSTTCCSSCCCEEEEECH
T ss_pred CcCCCcCHHHHHHHHHhCCCCcEEEEeCchH--hhcC-ccccCHHHHhhc--CCCEEEEeechhhhcCchhceeeeecCH
Confidence 999999999999999888 99999999999 5555 432 2222222 233688899999998768 9999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh-CCCeeeCCCCCCeEEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-MGFEVLGDNDSPVMPI 403 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~v~~~~~~~~~~~ 403 (489)
++++.+...... ++ .|++.++++.++|+.. ...++.+++++++.+++.+.|++ .|+.+.+. .+.++++
T Consensus 242 ~~~~~l~~~~~~--~~--~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~ 310 (363)
T 3ffh_A 242 EIIRQLNIVRPP--FN--TTSIGQKLAIEAIKDQ------AFIGECRTSNANGIKQYEAFAKRFEKVKLYPA-NGNFVLI 310 (363)
T ss_dssp HHHHHHHHTCCS--CC--CBHHHHHHHHHHHHCH------HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-CSSEEEE
T ss_pred HHHHHHHHhCCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHhhCCCceECCC-CCeEEEE
Confidence 999999876653 33 8899999999988632 25678889999999999999999 68887644 4666666
Q ss_pred EeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 404 MLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+.. ...++.+.|.++||.+.+...+. ..+++||+++ |++|+++++++|+++
T Consensus 311 ~~~~--~~~~~~~~l~~~gi~v~~g~~~~---~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 311 DLGI--EAGTIFSYLEKNGYITRSGAALG---FPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp ECSS--CHHHHHHHHHHTTEECEETTTTT---CTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred ECCC--CHHHHHHHHHHCCeEEEeCccCC---CCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 6643 67889999999999999744332 2579999985 999999999999875
No 79
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.98 E-value=1.2e-30 Score=262.83 Aligned_cols=327 Identities=14% Similarity=0.154 Sum_probs=249.0
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC---CCEEEeCccHHHHHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK---PAAIVFGMGYVTNSA 176 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~ 176 (489)
..+.+++.++++.++.+. .+++.+++....... +......++++.++++++. +..+++++|++++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~y-------~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~ 96 (375)
T 3op7_A 27 VSISSLTLEELFALSGTN---PEDFYKKLQGTKLNY-------GWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLL 96 (375)
T ss_dssp CSCCCCCHHHHHHHHTCC---HHHHHHHHHTSCCSS-------CCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHH
T ss_pred CCCCCccHHHHHhhcccc---hHHHHHHHhcCCcCC-------CCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHH
Confidence 445556666666666442 267777776532222 2233348999999999742 466667778888999
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
++.++.++||.|+++.++|.++...++..|++++.++.+ |+++|+++++. ++.+|+++++
T Consensus 97 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~ 163 (375)
T 3op7_A 97 VLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-------------TTKMICINNA 163 (375)
T ss_dssp HHHHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-------------TCCEEEEESS
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-------------CCeEEEEcCC
Confidence 999999999999999999999999999999999888764 78888887753 3345667788
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCccEEEcccccccCCcc---eEEEe
Q 046230 250 YSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG 322 (489)
Q Consensus 250 ~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~ 322 (489)
++++|.+.+ +++|+++|++||++||+||+|+ .++..+.. ..+.. +.+++++||||++|.+| ||+++
T Consensus 164 ~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~--~~~~~~~~~~~~~~-----~~~i~~~s~sK~~~~~G~r~G~v~~ 236 (375)
T 3op7_A 164 NNPTGAVMDRTYLEELVEIASEVGAYILSDEVYR--SFSELDVPSIIEVY-----DKGIAVNSLSKTYSLPGIRIGWVAA 236 (375)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSC--CCSSSCCCCHHHHC-----TTEEEEEESSSSSSCGGGCCEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--cccccCCCchhhhc-----CCEEEEeEChhhcCCcccceEEEEe
Confidence 999999999 9999999999999999999999 55554322 22222 23678889999999668 99999
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeE
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVM 401 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~ 401 (489)
++++++.++.....+.++ .+++.++++.++|+... ...++.+++++++.+++.+.|++. ++.+..+.++...
T Consensus 237 ~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 309 (375)
T 3op7_A 237 NHQVTDILRDYRDYTMIC--AGVFDDLVAQLALAHYQ-----EILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTS 309 (375)
T ss_dssp CHHHHHHHTTTGGGTTSC--CCHHHHHHHHHHHHTHH-----HHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCE
T ss_pred CHHHHHHHHHHHhhhccC--CCcHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEE
Confidence 999999997665544443 78888888888887542 145667778899999999999987 6776666667777
Q ss_pred EEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 402 PIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++.+..+....++++.|+ ++||.+.+...+. ..+++|+++ ..+.+++++++++|.++++++.
T Consensus 310 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~--~~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 310 FVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFE---RDGYVRLGF--ACEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp EEEECCSSCHHHHHHHHHHHHCEECEEGGGGT---CTTEEEECC--CSCHHHHHHHHHHHHHHHGGGC
T ss_pred eEEcCCCCCHHHHHHHHHHhCCEEEeChhhhC---CCCeEEEEe--cCCHHHHHHHHHHHHHHHHHHh
Confidence 788877777788888885 6799999744322 257899998 4566999999999999998764
No 80
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.98 E-value=4.7e-31 Score=271.08 Aligned_cols=340 Identities=14% Similarity=0.145 Sum_probs=245.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----C-CCCEEEeCccHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----G-KPAAIVFGMGYVT 173 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g-~~~~i~~~sG~~a 173 (489)
++++|||+++++. ++ .+|.+.+++.+++++++...+.. .++......+|++.+++++ + .++.+++++|+.+
T Consensus 55 ~~~~i~l~~~~~~-~~-~~~~v~~a~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~ 130 (432)
T 3ei9_A 55 DAQVISLGIGDTT-EP-IPEVITSAMAKKAHELSTIEGYS--GYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKC 130 (432)
T ss_dssp TCCCEECSSCCCC-SC-CCHHHHHHHHHHHHHTTSTTTCC--CCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHH
T ss_pred CCCeEEccCCCCC-CC-CCHHHHHHHHHHHhcccccCCcc--CCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHH
Confidence 6789999988777 55 35899999999999865432211 2233344588999999986 4 3577888888887
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCC------------eEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVNGARGSGA------------TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+..++.++.++||.|+++.++|.++...++..|+ .++.++.++...+...+++. ++.+
T Consensus 131 al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~ 200 (432)
T 3ei9_A 131 DISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTV----------GRTD 200 (432)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGC----------CCCS
T ss_pred HHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhC----------CCCC
Confidence 7555688889999999999999999999888774 56667665332221112110 1344
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG- 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G- 317 (489)
+ |++..++|++|.+.+ +++|+++|++||++||+||+|+.+.++..+.......+. .+.+|+++||||+||.+|
T Consensus 201 ~-v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~ 277 (432)
T 3ei9_A 201 I-IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGA--EEVAMETASFSNYAGFTGV 277 (432)
T ss_dssp E-EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTG--GGTEEEEEESHHHHCTTTT
T ss_pred E-EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCC--CCeEEEEecchhccCCccc
Confidence 4 444577999998865 778888899999999999999943333222223322221 244799999999999778
Q ss_pred --eEEEeCHHH--------HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 --GYIAGSKEL--------IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 --G~i~~~~~~--------~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
||+++++++ ++.+........ .+.+++.++++.+++.... ..+.++.+++++++.+++++.|++
T Consensus 278 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~~ 351 (432)
T 3ei9_A 278 RLGWTVIPKKLLYSDGFPVAKDFNRIICTCF--NGASNISQAGALACLTPEG----LEAMHKVIGFYKENTNIIIDTFTS 351 (432)
T ss_dssp CCEEEECCTTCBCTTSCBHHHHHHHHHHHSC--CCSCHHHHHHHHHHSSHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEChHHhhcchHHHHHHHHHHhcccc--CCCCHHHHHHHHHHHhccc----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887 666654432211 2378888888888774210 114678889999999999999999
Q ss_pred CCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 388 MGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 388 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+|+.+..+..++++++.+. .....++.+.|+++ ||.+.+...+. +.+.+++||++ ..++++|++++++|++--+
T Consensus 352 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~-~~~~~~iRis~--~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 352 LGYDVYGGKNAPYVWVHFP-NQSSWDVFAEILEKTHVVTTPGSGFG-PGGEGFVRVSA--FGHRENILEACRRFKQLYK 426 (432)
T ss_dssp TTCCEEECSSSSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEEC--CSCHHHHHHHHHHHHHHHT
T ss_pred CCceecCCCcceEEEEECC-CCCHHHHHHHHHHHCCEEEeCchHhC-CCCCCEEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 9998877667888888876 44567788888876 99999744332 44578999997 5699999999999987544
No 81
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.98 E-value=5.5e-31 Score=268.34 Aligned_cols=333 Identities=14% Similarity=0.107 Sum_probs=245.7
Q ss_pred cceeEeccccccc--CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC------C--CCEEEeC
Q 046230 99 VNRCLNLGSYNYL--GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG------K--PAAIVFG 168 (489)
Q Consensus 99 g~~~id~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~--~~~i~~~ 168 (489)
|+++|||+++.+. .++. ++.+.+++.+++.+..... +......++++.++++++ . +..++++
T Consensus 37 g~~~i~l~~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~y-------~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~ 108 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQP-PEHMKEAYCKAIKEGHNYY-------GDSEGLPELRKAIVEREKRKNGVDITPDDVRVTA 108 (406)
T ss_dssp TCCCEECCCCCGGGTTCCC-CHHHHHHHHHHHHTTCCSC-------CCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred CCCEEEecCCCCCcCCCCC-CHHHHHHHHHHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcC
Confidence 6789999866553 4553 5789999999887522111 112223678888888762 2 3445556
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+|++++..++.++.++|+.|+++.++|.++...++..|++++.++.+ |+++|++.+++ ++
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------------~~ 175 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-------------RT 175 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-------------TE
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-------------Cc
Confidence 66778888888889999999999999999999999999998887653 67888877653 33
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCc-cEEEcccccccCCcc
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADV-DIMMGTFTKSFGSCG 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~-Di~~~t~sK~~g~~G 317 (489)
.+|+++++++++|.+.+ +++|+++|++||++||+||+|+ .+...+.. .....++ .+. ||+++||||++|++|
T Consensus 176 ~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~--~~~~~~~~-~~~~~~~-~~~~~i~~~s~sK~~~~~G 251 (406)
T 1xi9_A 176 KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD--LMTYEGEH-ISPGSLT-KDVPVIVMNGLSKVYFATG 251 (406)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTT--TCBSSSCC-CCHHHHC-SSSCEEEEEESTTTTCCGG
T ss_pred eEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcc--ccccCCCC-CCHHHcC-CCceEEEEeccccccCCCc
Confidence 45566788999999876 9999999999999999999999 44443322 1112222 344 789999999998767
Q ss_pred ---eEEE--eCH----HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 318 ---GYIA--GSK----ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 318 ---G~i~--~~~----~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
|+++ +++ ++++.+....... + +.+++.++++.++|+.. ....++.+++++++.+++.+.|+++
T Consensus 252 ~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~--~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 252 WRLGYMYFVDPENKLSEVREAIDRLARIR-L--CPNTPAQFAAIAGLTGP-----MDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp GCCEEEEEECTTCTTHHHHHHHHHHHHHT-C--CSCSHHHHHHHHHHHSC-----CHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cEEEEEEEecCchhHHHHHHHHHHHHHhh-c--CCCHHHHHHHHHHHhCC-----cHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9998 888 9998887644322 3 37788888888888632 2246778899999999999999998
Q ss_pred -CCeeeCCCCCCeEEEEeCC--CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 389 -GFEVLGDNDSPVMPIMLYN--PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 389 -g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++.+..+.++.++++.+.. .....++.+.|+ ++||.+.+..... +.+.+++||+++ ++++++++++++|.+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~-~~~~~~lRis~~--~~~~~i~~~~~~l~~~l 400 (406)
T 1xi9_A 324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG-EYGAGHFRAVFL--PPIEILEEAMDRFEKFM 400 (406)
T ss_dssp TTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGC-GGGTTBEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred CCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcC-CCCCCEEEEEec--CCHHHHHHHHHHHHHHH
Confidence 7777655556655555543 345778999998 7899998743222 123578999996 89999999999999998
Q ss_pred HHh
Q 046230 465 DLV 467 (489)
Q Consensus 465 ~~~ 467 (489)
+++
T Consensus 401 ~~~ 403 (406)
T 1xi9_A 401 KER 403 (406)
T ss_dssp HHC
T ss_pred HHH
Confidence 765
No 82
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.98 E-value=2.9e-30 Score=261.78 Aligned_cols=332 Identities=17% Similarity=0.122 Sum_probs=240.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC----CC-EEEe-CccHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK----PA-AIVF-GMGYV 172 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~-~i~~-~sG~~ 172 (489)
|+++|||+++. ..++ .+|.+.+++.+++..... +....|..++.+++++.+.+..|. ++ .+++ ++|++
T Consensus 29 g~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~----y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~ 102 (396)
T 3jtx_A 29 GMEAVPLHIGE-PKHP-TPKVITDALTASLHELEK----YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSRE 102 (396)
T ss_dssp TCCCEECSCCS-CCSC-CCHHHHHHHHHTGGGGGS----CCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHH
T ss_pred CCCeEEeCCcC-CCCC-CCHHHHHHHHHHhhhccC----CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHH
Confidence 89999998665 3444 357888888887754211 111223433334444444443352 33 5555 55556
Q ss_pred HHHHhHhhhcCCC-----CEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKG-----SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g-----~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
++..++.++.++| +.|+++.++|.++...++..|++++.++.+ |+++|++.+.+ ..+
T Consensus 103 al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~------------~~~ 170 (396)
T 3jtx_A 103 ALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK------------RTK 170 (396)
T ss_dssp HHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH------------TEE
T ss_pred HHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc------------CcE
Confidence 6788888998886 799999999999999999999999988763 77899988875 244
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC-ccc--cc---cCCCCCCccEEEcccccc
Q 046230 242 IMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR-GVC--EL---LEVDTADVDIMMGTFTKS 312 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~-~~~--~~---~~v~p~~~Di~~~t~sK~ 312 (489)
+|++.++++++|.+.+ +++|+++|++||++||+||+|+ .+..+|. ... .. ++.+ .+.+++++||||+
T Consensus 171 -~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~ 246 (396)
T 3jtx_A 171 -LVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYS--EIYFDGNKPLGCLQAAAQLGRS-RQKLLMFTSLSKR 246 (396)
T ss_dssp -EEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTT--TCCSTTCCCCCHHHHHHHTTCC-CTTEEEEEESTTT
T ss_pred -EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCchHHhhhhhcccc-cCcEEEEeccccc
Confidence 4545577999999977 5569999999999999999999 6666662 211 10 1111 2447889999999
Q ss_pred cCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 046230 313 FGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 313 ~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
++.+| ||+++++++++.+........ .+.|++.++++.++|+. ....++.+++++++.+++.+.|++.
T Consensus 247 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~l~~~- 317 (396)
T 3jtx_A 247 SNVPGLRSGFVAGDAELLKNFLLYRTYHG--SAMSIPVQRASIAAWDD------EQHVIDNRRLYQEKFERVIPILQQV- 317 (396)
T ss_dssp SSCGGGCCEEEEECHHHHHHHHHHHHHHT--CCCCHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred cCCcccceEEEEeCHHHHHHHHHHHhhcc--cCCCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 98878 999999999998876544332 34889999988888863 2356788889999999999999886
Q ss_pred CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCc-----CCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 390 FEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPAT-----PLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 390 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~-----~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+.+..+.+++++++.+.. ....++.+.|++ +||.+.+...+.. +.+.+++||+++ .+++++++++++|.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 318 FDVKLPDASFYIWLKVPD-GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSL 394 (396)
T ss_dssp SCCCCCSSSSEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred CCccCCCeeEEEEEECCC-CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 445555667777777654 456788888865 5999998544332 245689999985 4999999999999876
Q ss_pred H
Q 046230 464 G 464 (489)
Q Consensus 464 ~ 464 (489)
+
T Consensus 395 l 395 (396)
T 3jtx_A 395 Y 395 (396)
T ss_dssp C
T ss_pred h
Confidence 4
No 83
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.98 E-value=7.8e-31 Score=268.36 Aligned_cols=342 Identities=13% Similarity=0.147 Sum_probs=248.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC----C-----CCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG----K-----PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~-----~~~i~~~s 169 (489)
+..+|||++++ ..++ .+|.+.+++.+++.+.. ....+....|. .++++.++++++ . ++.+++++
T Consensus 27 ~~~~i~l~~g~-~~~~-~~~~v~~a~~~~~~~~~-~~~~y~~~~g~----~~lr~~la~~~~~~~g~~~~~~~~i~~~~g 99 (422)
T 3fvs_A 27 EHDVVNLGQGF-PDFP-PPDFAVEAFQHAVSGDF-MLNQYTKTFGY----PPLTKILASFFGELLGQEIDPLRNVLVTVG 99 (422)
T ss_dssp TSCCEECCCSS-CSSC-CCHHHHHHHHHHHHSCG-GGGSCCCTTCC----HHHHHHHHHHHHHHHTCCCCHHHHEEEESH
T ss_pred cCCceEeCCCC-CCCC-CCHHHHHHHHHHHhCCC-ccCCCCCCCCC----HHHHHHHHHHHHHhhCCCCCCCCcEEEECC
Confidence 35689997654 3444 35889999999887521 00111111233 566666666654 2 23455566
Q ss_pred cHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----------------CHHHHHHHHHHHHhcCC
Q 046230 170 GYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----------------TPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 170 G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----------------d~~~Le~~l~~~~~~g~ 232 (489)
|++++..++.++..+|+.|++..++|.++...++..|++++.++.+ |+++|++.++.
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~------ 173 (422)
T 3fvs_A 100 GYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------ 173 (422)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT------
T ss_pred hHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC------
Confidence 6677788889999999999999999999999999999998887754 66777766542
Q ss_pred CCCCCCCccEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcc
Q 046230 233 PRTHRPWKKIMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGT 308 (489)
Q Consensus 233 ~~~~~~~~~~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t 308 (489)
++.+|+++++++++|.+. ++++|+++|++||+++|+||+|+ .+.++|........+.. .+.+++++|
T Consensus 174 -------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S 244 (422)
T 3fvs_A 174 -------RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ--WMVYDGHQHISIASLPGMWERTLTIGS 244 (422)
T ss_dssp -------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCCGGGSTTTGGGEEEEEE
T ss_pred -------CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch--hhccCCCCCCChhhcccccCcEEEEec
Confidence 345666778899999998 49999999999999999999999 77766654222223321 245688899
Q ss_pred cccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc--cCCCchHHHHHHHHHHHHHHHHH
Q 046230 309 FTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG--EDGSSRGAQKLARIRENSNFFRS 383 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~--~~~~~~~~~~~~~~~~~~~~l~~ 383 (489)
+||.+|.+| ||+++++++++.+........++ .+++.++++.++|+.... .....+.++.+++++++.+++.+
T Consensus 245 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (422)
T 3fvs_A 245 AGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFH--CPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIR 322 (422)
T ss_dssp HHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCC--CCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCccceEEEEEeCHHHHHHHHHHHhhccCC--CCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999778 99999999999887655443444 788999988888874100 01233678889999999999999
Q ss_pred HHHhCCCeeeCCCCCCeEEEEeCCC----Cc---------HHHHHHHHhh-CCceEEeecCCCc----CCCCCeEEEeec
Q 046230 384 ELQKMGFEVLGDNDSPVMPIMLYNP----AK---------IPAFSRECLR-QNVAVVTVAFPAT----PLLLARARICIS 445 (489)
Q Consensus 384 ~L~~~g~~v~~~~~~~~~~~~~~~~----~~---------~~~~~~~l~~-~Gi~v~~~~~p~~----~~~~~~iRi~~~ 445 (489)
.|+++|+.+..+.++.++++.+... .. ..++++.|++ +||.+.+...... +.+.+++||+++
T Consensus 323 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~ 402 (422)
T 3fvs_A 323 SLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402 (422)
T ss_dssp HHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC
T ss_pred HHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec
Confidence 9999999887777788777765321 00 4577887665 5999997332211 345789999985
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 046230 446 ASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 446 ~~~t~edid~~l~~l~~~~~~ 466 (489)
.|+++|++++++|++++++
T Consensus 403 --~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 403 --KDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp --CCHHHHHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHHHHHHhh
Confidence 4999999999999998764
No 84
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.98 E-value=1.8e-30 Score=261.53 Aligned_cols=325 Identities=13% Similarity=0.040 Sum_probs=238.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (489)
| ++|||+++. ..++ .||.+.+++.+++.... . +....|. .++++.+|+++ |. ++ .++.++|
T Consensus 23 g-~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~-~---y~~~~g~----~~lr~~la~~l~~~~g~~~~~~~i~~t~g~ 91 (376)
T 3ezs_A 23 K-RGLDLGIGE-PQFE-TPKFIQDALKNHTHSLN-I---YPKSAFE----ESLRAAQRGFFKRRFKIELKENELISTLGS 91 (376)
T ss_dssp S-CCCBCSSCC-CCSC-CCHHHHHHHHTTGGGGG-S---CCCTTCC----HHHHHHHHHHHHHHHSCCCCGGGEEEESSS
T ss_pred C-CEEEeCCCC-CCCC-CCHHHHHHHHHhhhhcC-C---CCCCCCC----HHHHHHHHHHHHHHhCCCCCHHHEEECcCc
Confidence 6 899997664 3343 35788888887763211 1 1111233 56666666665 63 34 4455666
Q ss_pred HHHHHHhHhhhcCC--CCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHH----HHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRK--GSLIISDSLNHNSIVNGARGSGATIRVFQHNTPS----HLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~--g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~----~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++ |+.|+++.++|.++...++..|++++.++.++.+ +|++.+.. +.+ +|
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~------------~~~-~v 158 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQ------------EVD-LV 158 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHH------------HCS-EE
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhcc------------CCC-EE
Confidence 77778889999999 9999999999999999999999999999876432 56666654 234 44
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cccccC---CCCCCccEEEcccccccCCc
Q 046230 245 IVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VCELLE---VDTADVDIMMGTFTKSFGSC 316 (489)
Q Consensus 245 ive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~~~~~---v~p~~~Di~~~t~sK~~g~~ 316 (489)
++..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|.. .....+ .+..+.+++++||||++|.+
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 236 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYS--EIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAP 236 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccch--hhccCCCCCCHHHccccccccccCcEEEEecchhccCCc
Confidence 45567899999877 7788888999999999999999 66666533 111111 00134478899999999877
Q ss_pred c---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 046230 317 G---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL 393 (489)
Q Consensus 317 G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~ 393 (489)
| ||+++++++++.+........++ .+++.++++.++|+.. ...++.+++++++.+++.+.|+ ++.
T Consensus 237 G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~--~~~-- 304 (376)
T 3ezs_A 237 GLRSGFIAGDSRLLEKYKAFRAYLGYT--SANAIQKASEAAWLDD------RHAEFFRNIYANNLKLARKIFK--NTL-- 304 (376)
T ss_dssp GGCCEEEEECHHHHHHHHHHHTTTCCC--CCHHHHHHHHHHHHCS------HHHHHHHHHHHHHHHHHHHHST--TCC--
T ss_pred cceeEEEeeCHHHHHHHHHHHhhhcCC--CChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHhc--CCC--
Confidence 8 99999999999988766544444 8999999988888742 2467788888999999999887 654
Q ss_pred CCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 394 GDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPAT-PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+..+.++++.+. ...++.+.|++ +||.+.+...+.. +...+++||+++ .|++++++++++|.+++++
T Consensus 305 ~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 305 IYPYSFYVYLPVQ---NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp CCSBSSEEEEECS---CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred CCCcceEEEEECC---CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence 4455777777665 56789999998 7999998443332 345689999985 4999999999999998754
No 85
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.2e-30 Score=263.08 Aligned_cols=334 Identities=15% Similarity=0.120 Sum_probs=242.8
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CC-EEEe-CccH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PA-AIVF-GMGY 171 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~-~sG~ 171 (489)
.+|||+++.. .++ .+|.+.+++.+++++... .+....|. .++++.+++++ |. ++ .+++ ++|+
T Consensus 26 ~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~---~y~~~~g~----~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~ 96 (411)
T 2o0r_A 26 GAVNLGQGFP-DED-GPPKMLQAAQDAIAGGVN---QYPPGPGS----APLRRAIAAQRRRHFGVDYDPETEVLVTVGAT 96 (411)
T ss_dssp TCEESSCSSC-SSC-CCHHHHHHHHHHHHTTCC---SCCCTTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHH
T ss_pred CeeeccCcCC-CCC-CCHHHHHHHHHHHhcCCC---CCCCCCCC----HHHHHHHHHHHHHHcCCCCCCCceEEEeCCHH
Confidence 4788875542 344 358899999999876211 11111223 67777777775 53 23 4555 5567
Q ss_pred HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 172 VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH--------NTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+++..++.++.++|+.|+++.+.|+++...++..|++++.++. .|+++|++.++. ++.+
T Consensus 97 ~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------------~~~~ 163 (411)
T 2o0r_A 97 EAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP-------------RTRA 163 (411)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-------------TEEE
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-------------CceE
Confidence 7788888888999999999999999999999999999888775 378888877743 3445
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc--
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG-- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G-- 317 (489)
|+++++++++|.+.+ +++|+++|++||++||+||+|+ .+..+|........++. .+.|++++|+||++|.+|
T Consensus 164 v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 241 (411)
T 2o0r_A 164 LIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE--HLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWK 241 (411)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTC
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCcChhhccCCCCCEEEEeechhhcCCccce
Confidence 666788999999876 5999999999999999999999 55555543222333321 356899999999999667
Q ss_pred -eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 046230 318 -GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~ 396 (489)
||+++++++++.+........++ .+++.++++.++|+.. ....++.+++++++.+++.+.|+++|+.+..+.
T Consensus 242 ~G~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 314 (411)
T 2o0r_A 242 IGWACGPAELIAGVRAAKQYLSYV--GGAPFQPAVALALDTE-----DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSY 314 (411)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTSC--CCTTHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC
T ss_pred EEEEeeCHHHHHHHHHHHhhccCC--CChHHHHHHHHHHhCC-----hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCC
Confidence 99999999998887654332333 5667777788888753 114577888999999999999998898887666
Q ss_pred CCCeEEEEeCCC--CcHHHHHHHHh-hCCceEEeecCCCcCC----------CCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNP--AKIPAFSRECL-RQNVAVVTVAFPATPL----------LLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 397 ~~~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~p~~~~----------~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.+.++++.+... ....++.++|+ ++||.+.+......+. +.+++||+++ .+++++++++++|.++
T Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~ 392 (411)
T 2o0r_A 315 GTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSVL 392 (411)
T ss_dssp BSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--SCHHHHHHHHHHHGGG
T ss_pred eeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 677777777541 34678888887 5699999743211111 3578999984 5899999999999887
Q ss_pred HHHh
Q 046230 464 GDLV 467 (489)
Q Consensus 464 ~~~~ 467 (489)
+++.
T Consensus 393 ~~~~ 396 (411)
T 2o0r_A 393 AERP 396 (411)
T ss_dssp GC--
T ss_pred Hhcc
Confidence 6543
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.1e-29 Score=254.28 Aligned_cols=297 Identities=15% Similarity=0.191 Sum_probs=234.0
Q ss_pred chhHHHHHHHHHHHhCCC--CEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchH--HHHHHHhcCCeEEEecC-----
Q 046230 145 LMVHNELEECVARFVGKP--AAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNS--IVNGARGSGATIRVFQH----- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~--~~~~~~~~g~~~~~~~~----- 214 (489)
.+...++++.+++++|.+ +.+++ ++|++++..++.++.++|+.|++..+.|.+ +...++..|++++.++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 131 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKA 131 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCC
Confidence 567789999999999976 54555 667777888888888999999999999998 77778888999988886
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
.|+++|++.+++. .++.+|+++++++++|.+.++++|.++|++||++||+||+|+.|.+.
T Consensus 132 ~d~~~l~~~l~~~-----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--------- 191 (386)
T 2dr1_A 132 VKPEDLDDALRKN-----------PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGAD--------- 191 (386)
T ss_dssp CCHHHHHHHHHHC-----------TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBC---------
T ss_pred CCHHHHHHHHhcC-----------CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcc---------
Confidence 4889999988641 13445666789999999999999999999999999999999955431
Q ss_pred cCCCCCCccEEEcccccccCCc-c-eEEEeCHHHHHHHHh----------------h--CCCcccccCCCHHHHHHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGSC-G-GYIAGSKELIQYLKY----------------T--CPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~~~~~~l~~----------------~--~~~~~~~~~~~p~~~aa~~a~ 354 (489)
.++...++|++++|++|+++++ | |++++++++++.+.. . ... ...+.+++.++++.++
T Consensus 192 ~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~ 269 (386)
T 2dr1_A 192 IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKES--TPSTPPMPQVFGINVA 269 (386)
T ss_dssp CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSS--CSSCCCHHHHHHHHHH
T ss_pred ccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCC--CCCCCCHHHHHHHHHH
Confidence 1222224599999999999865 5 999999998887732 1 111 1224788889999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN---DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
|+.+... +..++.+++++++.+++.+.|+++|+.+..+. .+.++++.+.......++.++|.++||.+.+...+
T Consensus 270 l~~~~~~---g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~ 346 (386)
T 2dr1_A 270 LRIIEKM---GGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGS 346 (386)
T ss_dssp HHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGG
T ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccc
Confidence 9876310 02467899999999999999999988876553 36677777765556788999999999999864322
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (489)
...+++||+++..+|++|+++++++|++++++++.
T Consensus 347 ---~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 347 ---VKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp ---GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 24578999998889999999999999999987754
No 87
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=3.1e-31 Score=266.35 Aligned_cols=322 Identities=16% Similarity=0.221 Sum_probs=239.5
Q ss_pred CCccchHHHHHHHHHhCC-CCC-CcccCCCcchhHHHHHHH-HHHHhCCCCEEEeCcc-HHHHHHhHhhhcCCCCEEEEc
Q 046230 116 SDEYCTPRVIESLKKYSP-STC-SSRVDGGTLMVHNELEEC-VARFVGKPAAIVFGMG-YVTNSAILPVLMRKGSLIISD 191 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~-~~~-~~~~~~g~~~~~~~l~~~-la~~~g~~~~i~~~sG-~~a~~~~~~al~~~g~~Vl~~ 191 (489)
.++.+.+++.+++..... ..+ .+...++..+...++++. ++++++.+ .+++++| ++++..++.++.++|+.|+++
T Consensus 21 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~ 99 (371)
T 2e7j_A 21 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMD 99 (371)
T ss_dssp CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEc
Confidence 357888888887765321 011 112222345667899999 99999988 7777666 677888888889999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEec--CC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHH
Q 046230 192 SLNHNSIVNGARGSGATIRVFQ--HN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264 (489)
Q Consensus 192 ~~~h~~~~~~~~~~g~~~~~~~--~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~ 264 (489)
.++|+++...++..|++++.++ .+ |+++|++.+++.... .++.+|+++++++++|.+.++++|.+
T Consensus 100 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~--------~~~~~v~~~~~~nptG~~~~~~~i~~ 171 (371)
T 2e7j_A 100 ENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR--------GEVVLALITYPDGNYGNLPDVKKIAK 171 (371)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT--------SCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred cCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc--------CCeEEEEEECCCCCCcccCCHHHHHH
Confidence 9999999999999999999998 66 899999999753110 14557888999999999999999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-c-eEEEeCHHHHHH-HHhhCCCccc--
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAGSKELIQY-LKYTCPAHLY-- 339 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~~~~~~-l~~~~~~~~~-- 339 (489)
+|++||+++|+||+|+.|.... .. ..+ .+ |++++|++|+++++ | |++++++++++. +.....++..
T Consensus 172 ~~~~~~~~li~D~a~~~~~~~~---~~-~~~--~~---di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 242 (371)
T 2e7j_A 172 VCSEYDVPLLVNGAYAIGRMPV---SL-KEI--GA---DFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEV 242 (371)
T ss_dssp HHHTTTCCEEEECTTTBTTBCC---CH-HHH--TC---SEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBG
T ss_pred HHHHcCCeEEEECccccCCCCC---Ch-hhc--CC---CEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCccccc
Confidence 9999999999999999543321 11 111 23 89999999998753 3 999999988777 6554432222
Q ss_pred ---ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH--HHHHHHHHHHHHhCCCeeeCCC--CCCeEEEEeCCCCcHH
Q 046230 340 ---ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI--RENSNFFRSELQKMGFEVLGDN--DSPVMPIMLYNPAKIP 412 (489)
Q Consensus 340 ---~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~g~~v~~~~--~~~~~~~~~~~~~~~~ 412 (489)
..+.++..++++.++++.+. . +..+++ +++.+++.+.|+++|+.+..+. .++++++.+. ...
T Consensus 243 ~~~~~~~~~~~~~a~~~~l~~~~-------~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---~~~ 311 (371)
T 2e7j_A 243 ELLGCTARGATIITLMASFPHVR-------E-RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE---VLY 311 (371)
T ss_dssp GGTTCCCCSHHHHHHHHHHHHHH-------H-HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH---HHH
T ss_pred ccccCCcCHHHHHHHHHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC---CHH
Confidence 34577788888888888772 2 667788 8999999999999888887653 4667777664 567
Q ss_pred HHHHHHhhCCceEEeecCCCc---CCCCCeEE-EeecCC-CCHHHHHHHHHHHHHHHHHh
Q 046230 413 AFSRECLRQNVAVVTVAFPAT---PLLLARAR-ICISAS-HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~p~~---~~~~~~iR-i~~~~~-~t~edid~~l~~l~~~~~~~ 467 (489)
++.+.|.++||.+.+ ..+.. ....+++| ++++.. +|++++++++++|+++++++
T Consensus 312 ~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 312 EISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 899999988999986 22111 11257899 999877 89999999999999998764
No 88
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=6.9e-30 Score=255.93 Aligned_cols=324 Identities=17% Similarity=0.196 Sum_probs=245.0
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC--CCEEEeCccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK--PAAIVFGMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~ 176 (489)
|+.+|||+++.+ .++ .+|.+.+++.+++.+.+.....+ + .....++++++|+++|. +..+++++|++++..
T Consensus 25 ~~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~~y----~-~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~ 97 (360)
T 3hdo_A 25 IASWIKLNTNEN-PYP-PSPEVVKAILEELGPDGAALRIY----P-SASSQKLREVAGELYGFDPSWIIMANGSDEVLNN 97 (360)
T ss_dssp CTTSEECSSCCC-SSC-CCHHHHHHHHHHHTTTCGGGGSC----C-CSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred ccceeeccCCCC-CCC-CCHHHHHHHHHHHhcccchhhcC----C-CCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 788999987653 344 35889999999887632111111 1 11237999999999984 355555777778888
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~ 256 (489)
++.++.++||.|+++.++|.++...++..|++++.++.++...++++++. ...+ +++++.+++++|.+
T Consensus 98 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~-----------~~~~-~v~i~~p~nptG~~ 165 (360)
T 3hdo_A 98 LIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPER-----------YEGK-VFFLTTPNAPLGPS 165 (360)
T ss_dssp HHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSS-----------BCSS-EEEEESSCTTTCCC
T ss_pred HHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhh-----------cCCC-EEEEeCCCCCCCCC
Confidence 99999999999999999999999999999999999987643222211111 1233 66667789999999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhh
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT 333 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~ 333 (489)
.++++|.++|+++|++||+||+|+ .+... ......+. .+.+++++||||++|.+| ||+++++++++.+...
T Consensus 166 ~~~~~l~~l~~~~~~~li~De~~~--~~~~~--~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~ 239 (360)
T 3hdo_A 166 FPLEYIDELARRCAGMLVLDETYA--EFAES--NALELVRR--HENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKI 239 (360)
T ss_dssp CCHHHHHHHHHHBSSEEEEECTTG--GGSSC--CCTHHHHH--CSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHCCCEEEEECChH--hhCCc--chhHHhcc--CCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHh
Confidence 999999999999999999999999 55332 22222221 233688899999998767 9999999999999876
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHH
Q 046230 334 CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPA 413 (489)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 413 (489)
... ++ .|++.++++.++|+.. ++.++.+++++++.+++.+.|+++|+.+.. ..+.++++.+. .....+
T Consensus 240 ~~~--~~--~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 307 (360)
T 3hdo_A 240 RDH--YN--LDRLAQAACVAALRDQ------AYLSECCRRIRETREWFTTELRSIGYDVIP-SQGNYLFATPP-DRDGKR 307 (360)
T ss_dssp SCS--CC--SCHHHHHHHHHHHHCH------HHHHHHHHHHHHHHHHHHHHHHHTTCEECC-CSSSEEEEECT-TCCHHH
T ss_pred CCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCEEcC-CCccEEEEECC-CCCHHH
Confidence 643 33 8899999999988742 146788899999999999999999888754 45666666554 346788
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+.+.|.++||.+.+... +...+++||+++ |++|+++++++|+++.+
T Consensus 308 l~~~l~~~gi~v~~~~~---~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 308 VYDGLYARKVLVRHFSD---PLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHHTTEECBCCCS---TTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCEEEEECCC---CCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 99999999999986433 344589999984 89999999999988764
No 89
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.97 E-value=1.3e-29 Score=256.43 Aligned_cols=328 Identities=18% Similarity=0.177 Sum_probs=239.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEe-Ccc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVF-GMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~-~sG 170 (489)
|+.+|||+++++ .++. ++.+.+++.+++++... .+....|. .++++.+++++ |. ++.+++ ++|
T Consensus 30 ~~~~i~l~~~~~-~~~~-~~~v~~a~~~~~~~~~~---~y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~ 100 (385)
T 1b5p_A 30 GVDLVALTAGEP-DFDT-PEHVKEAARRALAQGKT---KYAPPAGI----PELREALAEKFRRENGLSVTPEETIVTVGG 100 (385)
T ss_dssp TCCCEECCCSSC-SSCC-CHHHHHHHHHHHHTTCC---SCCCTTCC----HHHHHHHHHHHHHTTCCCCCGGGEEEESHH
T ss_pred CCCEEEecCCCC-CCCC-CHHHHHHHHHHHhcCCC---CCCCCCCC----HHHHHHHHHHHHHHhCCCCChHHEEEcCCh
Confidence 456889976654 3332 47788888888765211 11111233 67777777776 32 244555 555
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
++++..++.++.++||.|+++.++|..+...++..|++++.++.+ |+++|++++.. +.+ +
T Consensus 101 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------------~~~-~ 167 (385)
T 1b5p_A 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------------RTK-A 167 (385)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT------------TEE-E
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC------------CCE-E
Confidence 677788889999999999999999999999999999999888863 56677665542 234 4
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---
Q 046230 244 VIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG--- 317 (489)
Q Consensus 244 vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G--- 317 (489)
|++.++++++|.+.+ +++|+++|++||++||+||+|+ .+...| .......+++ +.+|+++||||.+|.+|
T Consensus 168 v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~~~~G~Ri 243 (385)
T 1b5p_A 168 LVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYE--HLLYEG-EHFSPGRVAP-EHTLTVNGAAKAFAMTGWRI 243 (385)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBSSS-CCCCGGGTCT-TTEEEEEESTTTTTCGGGCC
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccch--hcccCC-CCCCHHHcCC-CCEEEEEechhhcCCcccce
Confidence 555567899999866 8999999999999999999999 554444 2222333444 55899999999999778
Q ss_pred eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHH---HHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 046230 318 GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKV---ILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG 394 (489)
Q Consensus 318 G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~---i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~ 394 (489)
||+++++++++.+........+ +.+++.+.++.++|+. .. .+.++.+++++++.+++.+.|+++|+.+..
T Consensus 244 G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 316 (385)
T 1b5p_A 244 GYACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASR-----AFVEMAREAYRRRRDLLLEGLTALGLKAVR 316 (385)
T ss_dssp EEEECCHHHHHHHHHHHHTTTC--SCCHHHHHHHHHHHHCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred EEEEeCHHHHHHHHHHHhhccC--CCCHHHHHHHHHHHhCCCcch-----HHHHHHHHHHHHHHHHHHHHHHHCCCeecC
Confidence 9999999999888765433222 3778888877777753 11 145678889999999999999988888776
Q ss_pred CCCCCeEEEEeC-CCCcHHHHHHHHhhCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 395 DNDSPVMPIMLY-NPAKIPAFSRECLRQNVAVVTV-AFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 395 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
+.+++++++.+. ......++.+.|.++||.+.+. .|.. .+++||++. ++++++++++++|.++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~----~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 317 PSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAA----FGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp CSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTC----TTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred CCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCC----CCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 666766666664 2345778999999999999973 3321 478999985 899999999999877653
No 90
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.97 E-value=2e-30 Score=264.26 Aligned_cols=337 Identities=15% Similarity=0.148 Sum_probs=245.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC------C---CCEEEeCc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG------K---PAAIVFGM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~---~~~i~~~s 169 (489)
+..+|||++++ ..++ .+|.+.+++.+++.+... .. ++......++++.+|++++ . +..++.++
T Consensus 22 ~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~--~~----y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g 93 (410)
T 3e2y_A 22 DPSVVNLGQGF-PDIS-PPSYVKEELSKAAFIDNM--NQ----YTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVG 93 (410)
T ss_dssp STTSEECSSCC-CCSC-CCHHHHHHHHHHHTCGGG--GS----CCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESH
T ss_pred CCCeEEecCCC-CCCC-CCHHHHHHHHHHHhCccc--cC----CCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 45689998655 3444 358899999988875311 01 1111123677888888765 1 34444455
Q ss_pred cHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----------------CHHHHHHHHHHHHhcCCC
Q 046230 170 GYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----------------TPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 170 G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----------------d~~~Le~~l~~~~~~g~~ 233 (489)
|++++..++.++.++|+.|++..++|..+...+...|++++.++.+ |+++|++.++.
T Consensus 94 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~------- 166 (410)
T 3e2y_A 94 AYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS------- 166 (410)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-------
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC-------
Confidence 6677888899999999999999999999999999999998888764 67777776642
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC-CCCccEEEccc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD-TADVDIMMGTF 309 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~-p~~~Di~~~t~ 309 (489)
+..+|+++++++++|.+. ++++|+++|++||+++|+||+|+ .+.++|........+. ..+.+++++||
T Consensus 167 ------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 238 (410)
T 3e2y_A 167 ------KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE--WLVYTGHTHVKIATLPGMWERTITIGSA 238 (410)
T ss_dssp ------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT--TCBCTTCCCCCGGGSTTCGGGEEEEEEH
T ss_pred ------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh--hcccCCCCCCCHHHcCCccCeEEEEecc
Confidence 345666778999999984 69999999999999999999999 7777665422222222 12446888999
Q ss_pred ccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc--cCCCchHHHHHHHHHHHHHHHHHH
Q 046230 310 TKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG--EDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 310 sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
||.+|.+| ||+++++++++.+........++ .+++.++++.++|+.... .......++.+++++++.+++.+.
T Consensus 239 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (410)
T 3e2y_A 239 GKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYT--CATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRL 316 (410)
T ss_dssp HHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCC--CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCceEEEEEECHHHHHHHHHHHHhhccC--CChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999778 99999999999887655443444 788999988888874110 012336778889999999999999
Q ss_pred HHhCCCeeeCCCCCCeEEEEeCCCC-----------cHHHHHHHHh-hCCceEEeecCCCc----CCCCCeEEEeecCCC
Q 046230 385 LQKMGFEVLGDNDSPVMPIMLYNPA-----------KIPAFSRECL-RQNVAVVTVAFPAT----PLLLARARICISASH 448 (489)
Q Consensus 385 L~~~g~~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~-~~Gi~v~~~~~p~~----~~~~~~iRi~~~~~~ 448 (489)
|+++|+.+..+.++.++++.+.... ...++.+.++ ++||.+.+...... +.+.+++||++ .+
T Consensus 317 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~--~~ 394 (410)
T 3e2y_A 317 LNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF--IK 394 (410)
T ss_dssp HHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEEC--CC
T ss_pred HHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEE--cC
Confidence 9999998877777887777664211 1236777665 55999998432221 12468999998 45
Q ss_pred CHHHHHHHHHHHHH
Q 046230 449 TKEDLIKALEVISR 462 (489)
Q Consensus 449 t~edid~~l~~l~~ 462 (489)
|+++|++++++|++
T Consensus 395 ~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 KDSTLDAAEEIFRA 408 (410)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999875
No 91
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=8.1e-30 Score=255.75 Aligned_cols=317 Identities=15% Similarity=0.150 Sum_probs=241.3
Q ss_pred ceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHH
Q 046230 100 NRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSA 176 (489)
Q Consensus 100 ~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ 176 (489)
+++|||+++ +.++ .+|.+.+++.+++..+.... .....++++++|++++.+ ..+++++|++++..
T Consensus 30 ~~~i~l~~~~~~~~---~~~~v~~a~~~~~~~~~~y~---------~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~ 97 (365)
T 3get_A 30 KEVIKLASNENPFG---TPPKAIECLRQNANKAHLYP---------DDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEF 97 (365)
T ss_dssp SCCEECSSCCCTTC---SCHHHHHHHHHHGGGTTSCC---------CTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CceEEecCCCCCCC---CCHHHHHHHHHHHHhhccCC---------CCChHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 679999866 4333 35889999998887422111 111268999999999953 44555666777788
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++.++|+.|+++.++|.++...++..|++++.++. .|+++|++.++. ++.+|++..+++
T Consensus 98 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~p~n 164 (365)
T 3get_A 98 AIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKD-------------EIKLIFLCLPNN 164 (365)
T ss_dssp HHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTT-------------TEEEEEEESSCT
T ss_pred HHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhCC-------------CCCEEEEcCCCC
Confidence 88999999999999999999999999999999999986 245566665542 344566677889
Q ss_pred CCCCCCChHHHHHHHH--HcCcEEEEEccccccccc---CCCC--ccccccCCCCCCccEEEcccccccCCcc---eEEE
Q 046230 252 MEGELCKFPEIIAICK--KYKAYIYLDEAHSIGAVG---KTGR--GVCELLEVDTADVDIMMGTFTKSFGSCG---GYIA 321 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~--~~~~~li~DEa~s~g~~g---~~G~--~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~ 321 (489)
++|.+.+.+++.++++ ++|+++|+||+|+ .+. ..+. ......+. .+.+++++||||++|.+| ||++
T Consensus 165 ptG~~~~~~~l~~l~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 165 PLGECLDASEATEFIKGVNEDCLVVIDAAYN--EFASFKDSKKHLEPCELIKE--FDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp TTCCCCCHHHHHHHHHTSCTTSEEEEECTTH--HHHHHHCGGGCCCHHHHHHH--CTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCcCHHHHHHHHHhCCCCcEEEEeCccH--HHhcccCCcccccHhHHhcc--CCCEEEEeecchHhcCcchheEEEE
Confidence 9999999888888887 7799999999999 443 2111 12222221 234788999999998667 9999
Q ss_pred eCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeE
Q 046230 322 GSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVM 401 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~ 401 (489)
+++++++.+...... ++ .|++.++++.++|+.. .+.++.+++++++.+++.+.|+++|+.+.+. .+.++
T Consensus 241 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~ 309 (365)
T 3get_A 241 ANANIISAFYKLRAP--FN--VSNLALKAAVAAMDDD------EFTEKTLENNFSQMELYKEFAKKHNIKIIDS-YTNFI 309 (365)
T ss_dssp ECHHHHHHHHHHSCT--TC--SCHHHHHHHHHHHTCH------HHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEE
T ss_pred cCHHHHHHHHHhcCC--CC--cCHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC-CCeEE
Confidence 999999999876654 33 8888888888888632 2567888999999999999999999887654 45666
Q ss_pred EEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 402 PIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++.+... ...++.+.|.++||.+.+...+. .+++|++++ |++|+++++++|++++
T Consensus 310 ~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~----~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 310 TYFFDEK-NSTDLSEKLLKKGIIIRNLKSYG----LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEECSSS-CHHHHHHHHHTTTEECEECGGGT----CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred EEECCCC-CHHHHHHHHHHCCEEEEECccCC----CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 6666544 67889999999999999744332 589999985 8999999999998875
No 92
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=1.2e-29 Score=256.60 Aligned_cols=326 Identities=13% Similarity=0.061 Sum_probs=235.3
Q ss_pred ccccCCCCC--CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC-E-EEeCccHHHHHHhHhhhcC
Q 046230 108 YNYLGFAAS--DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPA-A-IVFGMGYVTNSAILPVLMR 183 (489)
Q Consensus 108 ~~~lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~-i~~~sG~~a~~~~~~al~~ 183 (489)
.+|+|.+.. +|.+.+++.+++.+..... ....+..+...++++.++++++.+. . +++++|++++..++.++..
T Consensus 32 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~ 108 (397)
T 3f9t_A 32 GNIFGSMCSNVLPITRKIVDIFLETNLGDP---GLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKN 108 (397)
T ss_dssp TCBCSCSCCCCCTHHHHHHHHHTTCCTTSG---GGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCcHHHHHHHHHHHhhcCCCc---ccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHH
Confidence 344554433 5778888887776532111 1112456777889999999998753 3 5667788888888887765
Q ss_pred C-------------CCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 184 K-------------GSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 184 ~-------------g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
+ |+.|+++.++|+++...++..|++++.++.+ |+++|++.+++. ++.+|+
T Consensus 109 ~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------------~~~~v~ 176 (397)
T 3f9t_A 109 IWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDY------------DVDGII 176 (397)
T ss_dssp HHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHS------------CCCEEE
T ss_pred HHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhc------------CCeEEE
Confidence 5 9999999999999999999999999999876 899999998761 344566
Q ss_pred EcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcc-----ccccCCCCCCccEEEcccccccCCcc--e
Q 046230 246 VEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGV-----CELLEVDTADVDIMMGTFTKSFGSCG--G 318 (489)
Q Consensus 246 ve~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~-----~~~~~v~p~~~Di~~~t~sK~~g~~G--G 318 (489)
++++.+++|.+.++++|.++|++||++||+||+|+.+.++..+.+. ...+++.. ++|+++.|++|++++++ |
T Consensus 177 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g 255 (397)
T 3f9t_A 177 GIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSG 255 (397)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCE
T ss_pred EECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCce
Confidence 6677899999999999999999999999999999966566555421 01222222 45899999999985432 7
Q ss_pred EEEeC-HHHHHHHHhhCCCccc-------cc--CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 046230 319 YIAGS-KELIQYLKYTCPAHLY-------AT--SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM 388 (489)
Q Consensus 319 ~i~~~-~~~~~~l~~~~~~~~~-------~~--~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (489)
+++.+ +.+.+.+......... ++ ..++..+.++++.+... ..++.+++++++.+++.+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 256 GILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGRE-------GQRKIVNECMENTLYLYKKLKEN 328 (397)
T ss_dssp EEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHHC
Confidence 76664 5555544322211111 11 12334444444444322 56788899999999999999999
Q ss_pred CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 389 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
|+.+..+..++++.+.+.. ..++.+.|.++||.+.+... .+++||+++..+|++|+++++++|+++++
T Consensus 329 g~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~~~~------~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 329 NFKPVIEPILNIVAIEDED---YKEVCKKLRDRGIYVSVCNC------VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp TCCBSSCCSSSEEEEECTT---HHHHHHHHHHTTCBCEECSS------SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred CCEEEcCCCccEEEEEeCC---HHHHHHHHHhCCeEEeccCC------CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 8887666667776665432 67899999999999986432 37899999988999999999999998764
No 93
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.97 E-value=1.1e-29 Score=255.96 Aligned_cols=335 Identities=13% Similarity=0.170 Sum_probs=241.7
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHh
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAI 177 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~ 177 (489)
.|+|++++ ++.++.+.+++.+++.+ |+.........++......++++.+++++|.+ ..++.++|++++..+
T Consensus 3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~ 77 (384)
T 1eg5_A 3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWI 77 (384)
T ss_dssp EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHH
T ss_pred EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHH
Confidence 36666532 23468999999999886 33222111111233566789999999999965 445556677888888
Q ss_pred Hhhhc----CCCCEEEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 178 LPVLM----RKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 178 ~~al~----~~g~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
+.++. ++|+.|+++.+.|+++...+ +..|++++.++.+ |+++|++.+++ ++.+|+
T Consensus 78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~~~~v~ 144 (384)
T 1eg5_A 78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-------------DTFLVS 144 (384)
T ss_dssp HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-------------TEEEEE
T ss_pred HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-------------CCeEEE
Confidence 88887 78999999999999886665 6679999888763 77888877643 345666
Q ss_pred EcCcCCCCCCCCChHHHHHHHHHcC--cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEe
Q 046230 246 VEGIYSMEGELCKFPEIIAICKKYK--AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAG 322 (489)
Q Consensus 246 ve~v~s~~G~~~~l~~i~~l~~~~~--~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~ 322 (489)
++++++++|.+.++++|.++|++|| ++||+||+|++|.. . +++...+.|+++.|++|++|++| |++++
T Consensus 145 ~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~---~------~~~~~~~~di~~~s~sK~~g~~G~G~~~~ 215 (384)
T 1eg5_A 145 IMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKI---P------FSLEKLEVDYASFSAHKFHGPKGVGITYI 215 (384)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTS---C------CCCTTTCCSEEEEEGGGGTSCTTCEEEEE
T ss_pred EECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCc---c------cCchhcCCCEEEecHHHhcCCCceEEEEE
Confidence 7789999999999999999999999 99999999985432 1 11211235999999999999888 99999
Q ss_pred CHHH--HHHHHhhCC-CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---
Q 046230 323 SKEL--IQYLKYTCP-AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--- 396 (489)
Q Consensus 323 ~~~~--~~~l~~~~~-~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--- 396 (489)
++++ .+.+..... ......+.+++.++++.++|+.+.. ..++.+++++++.+++.+.|++.|+.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 290 (384)
T 1eg5_A 216 RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVE-----ELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEIS 290 (384)
T ss_dssp CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSB
T ss_pred cCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccC
Confidence 8875 222211100 0012235788888888889887531 4678899999999999999998888876543
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC----------------CCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 397 DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP----------------LLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~----------------~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
...++++.+. .....++.+.|.++||.+.+......+ ...+++||+++..+|++|+++++++|
T Consensus 291 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 369 (384)
T 1eg5_A 291 LPNTLSVSFP-NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKI 369 (384)
T ss_dssp CTTEEEEECT-TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEeC-CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHH
Confidence 1345666554 335778999999999999863211100 01368999998789999999999999
Q ss_pred HHHHHHhC
Q 046230 461 SRVGDLVG 468 (489)
Q Consensus 461 ~~~~~~~~ 468 (489)
+++++++.
T Consensus 370 ~~~~~~~~ 377 (384)
T 1eg5_A 370 EEILSFLD 377 (384)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHH
Confidence 99998764
No 94
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=2.4e-29 Score=252.47 Aligned_cols=321 Identities=14% Similarity=0.156 Sum_probs=245.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-C-CEEEe-CccHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-P-AAIVF-GMGYVTNS 175 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~-~~i~~-~sG~~a~~ 175 (489)
.+++|||+++. ..++ .+|.+.+++.+++.+..... ++ .....++++++|+++|. + +.+++ ++|++++.
T Consensus 29 ~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~~------y~-~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~ 99 (367)
T 3euc_A 29 SHGLVKLDAME-NPYR-LPPALRSELAARLGEVALNR------YP-VPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIIS 99 (367)
T ss_dssp CTTCEECCSSC-CCCC-CCHHHHHHHHHHHHHHHTTC------SC-CCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHH
T ss_pred CCCeeEccCCC-CCCC-CCHHHHHHHHHHhhhhhhhc------CC-CCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHH
Confidence 46799998664 3344 35899999999988532111 01 12348999999999997 2 45555 55566678
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++.++|+.|++..++|.++...++..|++++.++.+ |+++|++.+++. +.+ +|++.+++
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----------~~~-~v~~~~~~ 167 (367)
T 3euc_A 100 MLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEH-----------QPA-IVYLAYPN 167 (367)
T ss_dssp HHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHH-----------CCS-EEEEESSC
T ss_pred HHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhcc-----------CCC-EEEEcCCC
Confidence 8888999999999999999999988899999999988754 889999998763 234 55556889
Q ss_pred CCCCCCCC---hHHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEe
Q 046230 251 SMEGELCK---FPEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG 322 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~ 322 (489)
+++|.+.+ +++|+++|++| |+++|+||+|+ .++..+. ....+. .+.+++++||||+ +.+| ||+++
T Consensus 168 nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~--~~~~~~~--~~~~~~--~~~~i~~~s~sK~-~~~G~r~G~~~~ 240 (367)
T 3euc_A 168 NPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQ--PFAQESW--MSRLTD--FGNLLVMRTVSKL-GLAGIRLGYVAG 240 (367)
T ss_dssp TTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTC--CSSSCCS--GGGGGT--CTTEEEEEECCCT-TSCSCCEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcch--hhcccch--HHHHhh--CCCEEEEecchhh-cccccCceeeee
Confidence 99999854 78889999999 99999999999 5653332 112222 2346888899999 7667 99999
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeE
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVM 401 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~ 401 (489)
++++++.+...... ++ .|++.++++.++|+.. .+.++.+++++++.+++.+.|+++ |+.+. +..+.++
T Consensus 241 ~~~~~~~~~~~~~~--~~--~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~ 309 (367)
T 3euc_A 241 DPQWLEQLDKVRPP--YN--VNVLTEATALFALEHV------AVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFL 309 (367)
T ss_dssp CHHHHHHHGGGCCS--SC--CCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEE
T ss_pred CHHHHHHHHHhCCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEE
Confidence 99999999876653 33 8899999988888752 146788899999999999999998 88864 4456666
Q ss_pred EEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 402 PIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
++.+. ...++.+.|.++||.+.+...+. +...+++||+++ |++|+++++++|+++++
T Consensus 310 ~~~~~---~~~~l~~~l~~~gi~v~~~~~~~-~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 310 LARVP---DAAQTFDRLLARKVLIKNVSKMH-PLLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp EEECS---CHHHHHHHHHTTTEECEECGGGC-GGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred EEECC---CHHHHHHHHHHCCeEEEECCccC-CCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 66664 67789999999999999743322 344689999984 99999999999998753
No 95
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.97 E-value=8.3e-30 Score=258.70 Aligned_cols=330 Identities=14% Similarity=0.151 Sum_probs=236.5
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCC-CCCcccCCCcchhHHHHHHHHHHHh----C---CCCEEEe-Cc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPS-TCSSRVDGGTLMVHNELEECVARFV----G---KPAAIVF-GM 169 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~----g---~~~~i~~-~s 169 (489)
++++|||++++ ..++ .+|.+.+++.+++++.+.. ...+....|. .++++.+++++ | .++.+++ ++
T Consensus 34 ~~~~i~l~~~~-~~~~-~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~----~~lr~~la~~l~~~~g~~~~~~~i~~~~g 107 (398)
T 3ele_A 34 KENVYDFSIGN-PSIP-APQIVNDTIKELVTDYDSVALHGYTSAQGD----VETRAAIAEFLNNTHGTHFNADNLYMTMG 107 (398)
T ss_dssp GGGCEECCSCC-CCSC-CCHHHHHHHHHHHHHSCHHHHHSCCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred CCCeEEeecCC-CCCC-CCHHHHHHHHHHHhcCCccccCCcCCCCCc----HHHHHHHHHHHHHHhCCCCChHHEEEccC
Confidence 57899998653 4444 3588999999998873211 0111112234 55666666654 4 2344555 55
Q ss_pred cHHHHHHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 170 GYVTNSAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 170 G~~a~~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
|++++..++.++.++| +.|+++.++|.++...++..|++++.++.+ |+++|+++++. +..
T Consensus 108 ~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------------~~~ 174 (398)
T 3ele_A 108 AAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA-------------HTR 174 (398)
T ss_dssp HHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT-------------TEE
T ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc-------------CCC
Confidence 5777888999999999 999999999999999999999999999876 77888877643 344
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHH------cCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc
Q 046230 243 MVIVEGIYSMEGELCK---FPEIIAICKK------YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 243 ~vive~v~s~~G~~~~---l~~i~~l~~~------~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
+|++.++++++|.+.+ +++|+++|++ ||++||+||+|+ .+..+|.......+. .+.+++++||||++
T Consensus 175 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~ 250 (398)
T 3ele_A 175 GVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYR--EIVYDGIKVPFVTKY--YDNTLVCYSYSKSL 250 (398)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTT--TCBCTTCCCCCGGGT--CSSEEEEEESTTTS
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEecccc--ccccCCCCcCChHhh--cCCeEEEEehhhcC
Confidence 5666678999999988 7788899999 999999999999 676666432222222 23478899999999
Q ss_pred CCcc---eEEEeCHHHH------HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 314 GSCG---GYIAGSKELI------QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 314 g~~G---G~i~~~~~~~------~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
|.+| ||++++++++ +.+....... ...+.+++.++++.+.++. ...+++++++.+++.+.
T Consensus 251 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~----------~~~~~~~~~~~~~l~~~ 319 (398)
T 3ele_A 251 SLPGERIGYVLVPDEVYDKAELYAAVCGAGRAL-GYVCAPSLFQKMIVKCQGA----------TGDINAYKENRDLLYEG 319 (398)
T ss_dssp SCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHT-TCCCSCHHHHHHHTTCTTC----------CCCHHHHHHHHHHHHHH
T ss_pred CCccceeEEEEEcchhhhHHHHHHHHHHHhhhc-cccCCCHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHH
Confidence 9668 9999988743 3332221111 1123566666665554431 11467888899999999
Q ss_pred HHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 385 L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
|+++|+.+..+.++.++++.+... ...++.+.|.++||.+.+...+. ..+++||+++ +++++|++++++|.+++
T Consensus 320 L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~---~~~~iRis~~--~~~e~i~~~l~~l~~~l 393 (398)
T 3ele_A 320 LTRIGYHCFKPDGAFYMFVKALED-DSNAFCEKAKEEDVLIVAADGFG---CPGWVRISYC--VDREMIKHSMPAFEKIY 393 (398)
T ss_dssp HHHHTCCEECCSBSSEEEEECSSS-CHHHHHHHHHTTTEECEESGGGT---CTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred HHHcCCeecCCCeeEEEEEEcCCC-CHHHHHHHHHHCCEEEeCccccC---CCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 999898887777777677776543 57789999999999999743322 2479999984 79999999999999998
Q ss_pred HHhC
Q 046230 465 DLVG 468 (489)
Q Consensus 465 ~~~~ 468 (489)
+++.
T Consensus 394 ~~~~ 397 (398)
T 3ele_A 394 KKYN 397 (398)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8763
No 96
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=1.3e-28 Score=248.18 Aligned_cols=294 Identities=19% Similarity=0.219 Sum_probs=229.2
Q ss_pred chhHHHHHHHHHHHhCCCC----EEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchH--HHHHHHhcCCeEEEecCC---
Q 046230 145 LMVHNELEECVARFVGKPA----AIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNS--IVNGARGSGATIRVFQHN--- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~--~~~~~~~~g~~~~~~~~~--- 215 (489)
.+...++++.++++++.+. .++.++|++++. ++.++.++||.|++..+.|.+ +...++..|++++.++.+
T Consensus 34 ~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 112 (384)
T 3zrp_A 34 VEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGD 112 (384)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTC
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCC
Confidence 5677899999999999763 444466777778 888999999999999888866 444456779999988865
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccc
Q 046230 216 --TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293 (489)
Q Consensus 216 --d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~ 293 (489)
|+++|++.+++ .++.+|+++++++++|.+.|+++|.++|++||++||+||+|+.|..
T Consensus 113 ~~d~~~l~~~i~~------------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--------- 171 (384)
T 3zrp_A 113 YVKPGEVEEEVRK------------SEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAE--------- 171 (384)
T ss_dssp CCCHHHHHHHHHH------------SCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTS---------
T ss_pred CCCHHHHHHHHHh------------CCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCc---------
Confidence 89999999876 2456778889999999999999999999999999999999985533
Q ss_pred ccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHH-Hh------------hC---------CCcccccCCCHHHHH
Q 046230 294 LLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYL-KY------------TC---------PAHLYATSISPPAAE 349 (489)
Q Consensus 294 ~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l-~~------------~~---------~~~~~~~~~~p~~~a 349 (489)
..++...++|+++.|++|+++ +.| |++++++++++.+ .. .. ....+ .+.++..++
T Consensus 172 ~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 250 (384)
T 3zrp_A 172 EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYF-ATPPVHVIL 250 (384)
T ss_dssp CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCS-SCCCHHHHH
T ss_pred cccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcC-CCCCHHHHH
Confidence 122222245999999999985 556 9999999988877 11 10 11111 246777788
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC----CCCeEEEEeCCCCcHHHHHHHHhhCCceE
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN----DSPVMPIMLYNPAKIPAFSRECLRQNVAV 425 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 425 (489)
++.++++.+... ..++.+++++++.+++.+.|+++|+.+..+. .+.++++.+.. ....++.+.|.++||.+
T Consensus 251 a~~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v 325 (384)
T 3zrp_A 251 QLAEAFRLIEKE----GIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-ADPQKVLAGTVNEGVEF 325 (384)
T ss_dssp HHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-SCHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-CCHHHHHHHHHHCCEEE
Confidence 888888876321 2578899999999999999999988876654 35666676655 56788999999999999
Q ss_pred EeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 426 VTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 426 ~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
.+..+. +. +++||+++..+|++|+++++++|++++++++.+
T Consensus 326 ~~g~~~--~~--~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 326 APGVHP--AF--KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp EECCCT--TC--CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ecCCCC--Cc--CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 964421 11 789999988899999999999999999988754
No 97
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.97 E-value=5.8e-29 Score=255.01 Aligned_cols=319 Identities=15% Similarity=0.138 Sum_probs=229.6
Q ss_pred CcchhHHHHHHHHHHHhCCC----------CEEEeCccHH-HHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEE
Q 046230 143 GTLMVHNELEECVARFVGKP----------AAIVFGMGYV-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRV 211 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~----------~~i~~~sG~~-a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~ 211 (489)
|..++.+.+++.+++..|.+ +.+++++|++ ++..++.+++++||.|+++.++|..+...++..|++++.
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN 158 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence 55555555555555555643 4777777754 568888999999999999999999999999999999988
Q ss_pred ecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccc
Q 046230 212 FQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAV 284 (489)
Q Consensus 212 ~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~ 284 (489)
++.+ |+++|++.+++...........+..+++++++.+++++|.+.+ +++|+++|++||++||+||+|+ .+
T Consensus 159 v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~--~~ 236 (425)
T 2r2n_A 159 VASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY--FL 236 (425)
T ss_dssp ECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG--GG
T ss_pred eCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcc--cc
Confidence 8763 7888988886310000000000123444455788999999987 4599999999999999999999 66
Q ss_pred cCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHcc
Q 046230 285 GKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGE 361 (489)
Q Consensus 285 g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~ 361 (489)
...|........+++.+.+|+++||||+++ +| ||+++++++++.+........++ .+++.++++.++|+.+..+
T Consensus 237 ~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~ 313 (425)
T 2r2n_A 237 QFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLH--PSTFNQLMISQLLHEWGEE 313 (425)
T ss_dssp BSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCS--SCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHhcccc
Confidence 655544333344444455799999999998 68 99999999999887655443344 7888888888888753100
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhC--CC-eeeCCCCCCeEEEEeCCCCcHHH-HHHHHhhCCceEEeecCCCcC--C
Q 046230 362 DGSSRGAQKLARIRENSNFFRSELQKM--GF-EVLGDNDSPVMPIMLYNPAKIPA-FSRECLRQNVAVVTVAFPATP--L 435 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~v~~~~~p~~~--~ 435 (489)
....+.++.+++++++.+++.+.|++. |+ .+..+.+++++++.+.......+ +.+.|.++||.+.+...+..+ .
T Consensus 314 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~ 393 (425)
T 2r2n_A 314 GFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSA 393 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCC
Confidence 001145667788889999999999884 66 34556678888888865444445 578888999999984332221 2
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 436 LLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+.+++||+++ ..+++++++++++|.+++++.
T Consensus 394 ~~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 394 PSPYLRASFS-SASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp CCCEEEEECS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeC-CCCHHHHHHHHHHHHHHHHHh
Confidence 3578999996 369999999999999988653
No 98
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=1.4e-28 Score=247.21 Aligned_cols=317 Identities=15% Similarity=0.169 Sum_probs=241.7
Q ss_pred EecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHH------hCC-CCEEEeCccHHH-H
Q 046230 103 LNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARF------VGK-PAAIVFGMGYVT-N 174 (489)
Q Consensus 103 id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~------~g~-~~~i~~~sG~~a-~ 174 (489)
|||+++.+ .++ .+|.+.+++.+++++.+..... ++... ..++++.++++ ++. ++.+++++|+++ +
T Consensus 33 idl~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~~----y~~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al 105 (369)
T 3cq5_A 33 IRLNTNEN-PYP-PSEALVADLVATVDKIATELNR----YPERD-AVELRDELAAYITKQTGVAVTRDNLWAANGSNEIL 105 (369)
T ss_dssp EECSSCCC-CSC-CCHHHHHHHHHHHHHHGGGTTS----CCCTT-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred eeccCCCC-CCC-CCHHHHHHHHHHHHhccccccc----CCCcc-HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHH
Confidence 89987654 444 3589999999999875221111 11111 25888888888 443 456777666554 5
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
..++.++.++|+.|+++.+.|+++...++..|++++.++.+ |+++|++.+++. +..+|+++++
T Consensus 106 ~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------------~~~~v~~~~~ 173 (369)
T 3cq5_A 106 QQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK------------QPDIVFVTTP 173 (369)
T ss_dssp HHHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH------------CCSEEEEESS
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc------------CCCEEEEeCC
Confidence 78888899999999999999999999999999999888764 688898888652 2235556899
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCC-ccEEEcccccccCCcc---eEEEeCHH
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTAD-VDIMMGTFTKSFGSCG---GYIAGSKE 325 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~-~Di~~~t~sK~~g~~G---G~i~~~~~ 325 (489)
++++|.+.+++++.++|+++++++|+||+|+ .++.+.. .....+. .+ .+++++||||++|.+| ||++++++
T Consensus 174 ~nptG~~~~~~~l~~l~~~~~~~li~De~~~--~~~~~~~-~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 248 (369)
T 3cq5_A 174 NNPTGDVTSLDDVERIINVAPGIVIVDEAYA--EFSPSPS-ATTLLEK--YPTKLVVSRTMSKAFDFAGGRLGYFVANPA 248 (369)
T ss_dssp CTTTCCCCCHHHHHHHHHHCSSEEEEECTTG--GGCCSCC-GGGGTTT--CTTTEEEEEESSSTTSCGGGCCEEEEECTH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEECCch--hhcCCcc-hHHHHhh--CCCCEEEEEechHhcCCcccceEEEEeCHH
Confidence 9999999999999999999999999999999 5543311 1222121 12 4688899999999768 99999999
Q ss_pred HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEe
Q 046230 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIML 405 (489)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~ 405 (489)
+++.+...... ++ .|++.++++.++|+.. ++.++.+++++++.+++.+.|++.|+.+.+ ..++++++.+
T Consensus 249 ~~~~l~~~~~~--~~--~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~ 317 (369)
T 3cq5_A 249 FIDAVMLVRLP--YH--LSALSQAAAIVALRHS------ADTLGTVEKLSVERVRVAARLEELGYAVVP-SESNFVFFGD 317 (369)
T ss_dssp HHHHHHTTSCT--TC--SCHHHHHHHHHHHHTH------HHHHTHHHHHHHHHHHHHHHHHHHTCEEEC-CSSSEEEEEC
T ss_pred HHHHHHHcCCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHhCCCEECC-CCCeEEEEEC
Confidence 99988765543 33 8899999888888742 145678889999999999999988888764 4567777665
Q ss_pred CCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 406 YNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
. ....++.+.|.++||.+.+.+ ..+++||+++ +++|+++++++|+++++
T Consensus 318 ~--~~~~~l~~~l~~~gi~v~~~~------~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 318 F--SDQHAAWQAFLDRGVLIRDVG------IAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp C--SSHHHHHHHHHHTTEECBCCS------CTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred C--CCHHHHHHHHHHCCEEEEECC------CCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 4 456789999999999998541 2478999995 89999999999998764
No 99
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=8.6e-29 Score=252.37 Aligned_cols=327 Identities=15% Similarity=0.183 Sum_probs=247.8
Q ss_pred CCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC--EE-EeCccHHHHHHhHhhhcCCCCEEE
Q 046230 113 FAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPA--AI-VFGMGYVTNSAILPVLMRKGSLII 189 (489)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i-~~~sG~~a~~~~~~al~~~g~~Vl 189 (489)
+++.+..+.+++.+++.+...+... ....+...++++.++++++.+. .+ +.++|++++..++.++.++||.|+
T Consensus 15 ~~p~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl 90 (416)
T 3isl_A 15 MTPGPVEVDPRVLRVMSTPVVGQFD----PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVL 90 (416)
T ss_dssp CSSSSCCCCHHHHHHTTSCCCCTTS----HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred ecCCCcCcCHHHHHHhcccCCCCcc----HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEE
Confidence 4444566778888888764322211 1125667899999999999753 33 346777888888888899999999
Q ss_pred EcCCCchH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHH
Q 046230 190 SDSLNHNS--IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEI 262 (489)
Q Consensus 190 ~~~~~h~~--~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i 262 (489)
+..+.|.+ +...++..|++++.++.+ |+++|++++++. ++.+|+++++++++|.+.++++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------------~~~~v~~~~~~nptG~~~~l~~i 158 (416)
T 3isl_A 91 IPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKV------------KPKIVAMVHGETSTGRIHPLKAI 158 (416)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCHHH
T ss_pred EecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhC------------CCcEEEEEccCCCCceecCHHHH
Confidence 99999987 556778889999988876 899999999752 34567778899999999999999
Q ss_pred HHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhC------
Q 046230 263 IAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTC------ 334 (489)
Q Consensus 263 ~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~------ 334 (489)
.++|++||+++|+||+|+.|.+. .++...++|+++.|++|++ |+.| |+++.++++++.+....
T Consensus 159 ~~l~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw 229 (416)
T 3isl_A 159 GEACRTEDALFIVDAVATIGGCE---------VKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGI 229 (416)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-------
T ss_pred HHHHHHcCCEEEEECCccccCCC---------cchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccc
Confidence 99999999999999999865431 2222234599999999985 6656 99999999998886421
Q ss_pred ------------------------------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 335 ------------------------------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 335 ------------------------------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
.......+.+...++++.++++.+... ..++.+++++++.+++.+.
T Consensus 230 ~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~----g~~~~~~~~~~~~~~l~~~ 305 (416)
T 3isl_A 230 ATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE----GLETRFERHRHHEAALAAG 305 (416)
T ss_dssp -----------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHH
Confidence 111112246777888888888876320 2578899999999999999
Q ss_pred HHhCCCeeeCCCC---CCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHH-HHHHHHH
Q 046230 385 LQKMGFEVLGDND---SPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKED-LIKALEV 459 (489)
Q Consensus 385 L~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~ed-id~~l~~ 459 (489)
|++.|+.+..+.. +.++++.+.......++.+.|+++ ||.+.+.. .+...+++||+++...|++| +++++++
T Consensus 306 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~---~~~~~~~iRi~~~~~~~~~e~i~~~~~~ 382 (416)
T 3isl_A 306 IKAMGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSF---GPLAGKIWRIGTMGYSCRKENVLFVLAG 382 (416)
T ss_dssp HHHTTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCC---STTTTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred HHHcCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCC---CCCCCCEEEEecccCCCcHHHHHHHHHH
Confidence 9999888765543 567777776556788999999988 99988532 13456799999976667766 9999999
Q ss_pred HHHHHHHhCCcc
Q 046230 460 ISRVGDLVGIKY 471 (489)
Q Consensus 460 l~~~~~~~~~~~ 471 (489)
|++++++++.+.
T Consensus 383 l~~~~~~~~~~~ 394 (416)
T 3isl_A 383 LEAVLLRHNAGI 394 (416)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHcCCCc
Confidence 999999987654
No 100
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=1.2e-29 Score=253.88 Aligned_cols=326 Identities=13% Similarity=0.144 Sum_probs=234.9
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCccHHHHHH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMGYVTNSA 176 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ 176 (489)
+++||+.+ . ...+|++.+++.++ ++... ... ..+...++++++++++|.+ ..+++++|++++..
T Consensus 4 ~~~~~~~g-p---~~~~~~v~~a~~~~---~~~~~--~~~---~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~ 71 (366)
T 1m32_A 4 NYLLLTPG-P---LTTSRTVKEAMLFD---SCTWD--DDY---NIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEA 71 (366)
T ss_dssp -CEECSSS-S---CCCCHHHHHTTCCC---CCTTS--HHH---HTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHH
T ss_pred ccccccCC-C---cCCCHHHHHHHhhh---hcCCC--HHH---HHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHH
Confidence 36777633 1 22357777776653 22110 000 1156689999999999953 24555777888888
Q ss_pred hHhhhcCCCCEEE-EcCCCchH-HHHHHHhcCCeEEEecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 177 ILPVLMRKGSLII-SDSLNHNS-IVNGARGSGATIRVFQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 177 ~~~al~~~g~~Vl-~~~~~h~~-~~~~~~~~g~~~~~~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
++.++..+|+.|+ .+.++|++ +...+...|++++.++. .|+++|++++++. .+..+|++...
T Consensus 72 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~~~~~ 140 (366)
T 1m32_A 72 VLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD-----------PTISHIAMVHS 140 (366)
T ss_dssp HHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC-----------TTCCEEEEESE
T ss_pred HHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC-----------CCeEEEEEecc
Confidence 8888888888655 55688876 44556777888887765 4889999988762 12335556677
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHH
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELI 327 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~ 327 (489)
.+++|.+.++++|.++|++||++||+||+|+.|... +++...++|++++|++|++ |+.| |+++++++++
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~ 211 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP---------MDIAALHIDYLISSANKCIQGVPGFAFVIAREQKL 211 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHH
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccCcC---------ccccccCccEEEecCcccccCCCceEEEEECHHHH
Confidence 789999999999999999999999999999855321 1222223499999999988 6657 9999999988
Q ss_pred HHHHhhCCCccc----------------ccCCCHHHHHHHHHHHHHHHccCCCch--HHHHHHHHHHHHHHHHHHHHhCC
Q 046230 328 QYLKYTCPAHLY----------------ATSISPPAAEQIISAIKVILGEDGSSR--GAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 328 ~~l~~~~~~~~~----------------~~~~~p~~~aa~~a~L~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
+.+......+.+ ..+.++..++++.++|+.+.. . .++.+++++++.+++.+.|+++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-----~g~~~~~~~~~~~~~~~l~~~L~~~~ 286 (366)
T 1m32_A 212 AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAK-----EGGVAARHQRYQQNQRSLVAGMRALG 286 (366)
T ss_dssp TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH-----ccCHhHHHHHHHHHHHHHHHHHHHCC
Confidence 776543221111 135788888889999987732 2 46788999999999999999988
Q ss_pred CeeeCC---CCCCeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 390 FEVLGD---NDSPVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 390 ~~v~~~---~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+.+..+ ..+.++++.+.. .....++.+.|.++||.+.+...+ ..+++|++++..+|++|+++++++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 287 FNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS----QSDCFRIGNIGEVYAADITALLTAIRTAM 362 (366)
T ss_dssp CCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCS----SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred CeeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCC----CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 877554 234477777654 456788999999999999863322 45789999998889999999999999886
Q ss_pred HHh
Q 046230 465 DLV 467 (489)
Q Consensus 465 ~~~ 467 (489)
+++
T Consensus 363 ~~~ 365 (366)
T 1m32_A 363 YWT 365 (366)
T ss_dssp TTC
T ss_pred Hhc
Confidence 543
No 101
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=1.4e-28 Score=250.37 Aligned_cols=298 Identities=19% Similarity=0.256 Sum_probs=233.8
Q ss_pred chhHHHHHHHHHHHhCCCC--EEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchH--HHHHHHhcCCeEEEecCC----
Q 046230 145 LMVHNELEECVARFVGKPA--AIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNS--IVNGARGSGATIRVFQHN---- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~--~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~--~~~~~~~~g~~~~~~~~~---- 215 (489)
.+...++++.++++++.+. .+++ ++|++++..++.++.++|+.|++..+.|.+ +...++..|++++.++.+
T Consensus 45 ~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 124 (411)
T 3nnk_A 45 THYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEV 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCC
Confidence 4567899999999999753 2444 567888888889999999999999999987 777788889999988876
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 216 -TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 216 -d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
|+++|++++++. ++.+|+++++++++|.+.|+++|.++|++||+++|+||+|+.|.. .
T Consensus 125 ~d~~~l~~~i~~~------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~---------~ 183 (411)
T 3nnk_A 125 FTPDQVEDAVKRI------------RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGN---------P 183 (411)
T ss_dssp CCHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTB---------C
T ss_pred CCHHHHHHHHhhC------------CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCc---------c
Confidence 899999999762 344667778899999999999999999999999999999985432 1
Q ss_pred cCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhC----------------------------------CCcc
Q 046230 295 LEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTC----------------------------------PAHL 338 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~----------------------------------~~~~ 338 (489)
++....++|+++.|++|++ |+.| |+++.++++++.+.... ....
T Consensus 184 ~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 263 (411)
T 3nnk_A 184 LETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERL 263 (411)
T ss_dssp CCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCC
T ss_pred cchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccC
Confidence 2222234589999999985 5556 99999999999887543 0001
Q ss_pred cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC---CCeEEEEeCCCCcHHHHH
Q 046230 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND---SPVMPIMLYNPAKIPAFS 415 (489)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~ 415 (489)
...+.+...++++.++++.+..+ ..++.+++++++.+++.+.|+++|+.+..+.. +.++++.+.......++.
T Consensus 264 ~~~~~~~~~~~a~~~al~~~~~~----g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 339 (411)
T 3nnk_A 264 NHHTEATTALFGARECARLILQE----GLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGINGDQAR 339 (411)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCCCHHHHH
Confidence 12346788888888888876320 25688899999999999999999888765432 556677665556778999
Q ss_pred HHHhhC-CceEEeecCCCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 416 RECLRQ-NVAVVTVAFPATPLLLARARICI-SASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 416 ~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
+.|+++ ||.+.+. + .+...+++||++ +..+|++|+++++++|++++++++.+
T Consensus 340 ~~l~~~~gi~v~~g-~--~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 393 (411)
T 3nnk_A 340 KLMLEDFGIEIGTS-F--GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP 393 (411)
T ss_dssp HHHHHHHSEEEEEC-C--GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCeEEeCc-c--CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 999887 9999853 2 233457999998 77789999999999999999988754
No 102
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.97 E-value=1.4e-29 Score=258.75 Aligned_cols=338 Identities=11% Similarity=0.091 Sum_probs=242.4
Q ss_pred ceeEecccccc---cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC------------C-CC
Q 046230 100 NRCLNLGSYNY---LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG------------K-PA 163 (489)
Q Consensus 100 ~~~id~~s~~~---lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------------~-~~ 163 (489)
+++|||+++++ ..++ .++.+.+++.+++.+.... .++......++++.+|++++ . ++
T Consensus 33 ~~~i~l~~g~p~~~~~~~-~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~ 105 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLL-TSAAQIKKLKEAIDSQECN------GYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD 105 (416)
T ss_dssp SCCEECCCCCTTTTSCSC-CCHHHHHHHHHHHHTTCSS------SCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG
T ss_pred CCeEEecCcCCCcccCCC-CCHHHHHHHHHHhhCCccC------CcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc
Confidence 56899976653 2343 3588999999988763111 11222334788999999887 2 34
Q ss_pred EEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCC
Q 046230 164 AIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 164 ~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~ 235 (489)
.+++ ++|++++..++.++.++|+.|++..++|+++...++..|++++.++.+ |+++|++.++.
T Consensus 106 ~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------- 176 (416)
T 1bw0_A 106 NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD--------- 176 (416)
T ss_dssp GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT---------
T ss_pred eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc---------
Confidence 4555 555667788888999999999999999999999999999998887642 67788777643
Q ss_pred CCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC----ccccccCCCCCCccEEEcc
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR----GVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~----~~~~~~~v~p~~~Di~~~t 308 (489)
..+++++ ..+++++|.+.+ +++|+++|++||++||+||+|+ .+..+|. ......++++.+.+++++|
T Consensus 177 ---~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s 250 (416)
T 1bw0_A 177 ---KTKLLIV-TNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYA--GMVFKGKDPNATFTSVADFETTVPRVILGG 250 (416)
T ss_dssp ---TEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTT--TCBCCSSCTTCCCCCTTSSCCSCCEEEEEE
T ss_pred ---CCeEEEE-eCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCCCCCCccCHHHccCCCcEEEEec
Confidence 2344444 446889999988 9999999999999999999999 5655554 3223334433333688899
Q ss_pred cccccCCcc---eEEEeCHH--HHHHHHhhCCC-cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHH
Q 046230 309 FTKSFGSCG---GYIAGSKE--LIQYLKYTCPA-HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~~~~--~~~~l~~~~~~-~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
|||+++.+| ||++++++ +++.+...... .....+.|++.++++.++|+.+ .....++.+++++++.+++.
T Consensus 251 ~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~l~ 326 (416)
T 1bw0_A 251 TAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNT----PQEHLDQIVAKIEESAMYLY 326 (416)
T ss_dssp STTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHHH
Confidence 999998777 99987653 44433211000 0012247888999988888742 11246778889999999999
Q ss_pred HHHHhC-CCeeeCCCCCCeEEEEeCC-----CCcHHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHH
Q 046230 383 SELQKM-GFEVLGDNDSPVMPIMLYN-----PAKIPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIK 455 (489)
Q Consensus 383 ~~L~~~-g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~ 455 (489)
+.|+++ |+.+..+.+++++++.+.. .....++.+.|+ ++||.+.+...+. ..+++||++ .++++++++
T Consensus 327 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~iRis~--~~~~e~l~~ 401 (416)
T 1bw0_A 327 NHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH---APGFTRLTT--TRPVEVYRE 401 (416)
T ss_dssp HHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT---CTTEEEEEC--CSCHHHHHH
T ss_pred HHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC---CCCeEEEEe--cCCHHHHHH
Confidence 999988 8877666667777776642 145678888885 7799999743222 246899999 478999999
Q ss_pred HHHHHHHHHHHhC
Q 046230 456 ALEVISRVGDLVG 468 (489)
Q Consensus 456 ~l~~l~~~~~~~~ 468 (489)
++++|.+++++.+
T Consensus 402 ~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 402 AVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 103
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=1.2e-28 Score=246.54 Aligned_cols=318 Identities=16% Similarity=0.153 Sum_probs=235.7
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-CCEEEe-CccHHHHH
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-PAAIVF-GMGYVTNS 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~-~sG~~a~~ 175 (489)
|+++|||+++ ++++ .+|.+.+++.++++++.... .....++++++|++++. ++.+++ ++|++++.
T Consensus 25 ~~~~idl~~~~~~~~---~~~~v~~a~~~~~~~~~~y~---------~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~ 92 (361)
T 3ftb_A 25 GRELLDYSSNINPLG---IPKSFLNNIDEGIKNLGVYP---------DVNYRRLNKSIENYLKLKDIGIVLGNGASEIIE 92 (361)
T ss_dssp ---CEETTCCCCTTC---SCHHHHTTHHHHHHGGGSCC---------CTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHH
T ss_pred CCCEEEecCCCCCCC---CCHHHHHHHHHHHHHhcCCC---------CccHHHHHHHHHHHhCCCcceEEEcCCHHHHHH
Confidence 8899999866 4443 25889999999988732111 12348999999999985 356666 55566667
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++ +.|+++.++|.++...++..|++++.++.+ ++++|++.+++ .+ +|++..++
T Consensus 93 ~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-------------~~-~v~i~~p~ 154 (361)
T 3ftb_A 93 LSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-------------VD-SVIIGNPN 154 (361)
T ss_dssp HHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-------------CS-EEEEETTB
T ss_pred HHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-------------CC-EEEEeCCC
Confidence 777777 889999999999999999999999988754 55677766542 23 45566668
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCC-CCccccccCCCCCCccEEEcccccccCCcc---eEEE-e
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKT-GRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIA-G 322 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~-G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~-~ 322 (489)
+++|.+.+ +++|+++|++||+++|+||+|+ .+..+ +.......+. .+.+++++|+||.+|.+| ||++ +
T Consensus 155 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~g~~~~~ 230 (361)
T 3ftb_A 155 NPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFI--EFTGDPSSSFVGEIKN--YSCLFIIRAMTKFFAMPGIRFGYGITN 230 (361)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSG--GGTCCTTSSSGGGTTT--CSSEEEEEESSSTTSCGGGCCEEEEES
T ss_pred CCCCCCCCHHHHHHHHHHhhhcCCEEEEECcch--hhcCCcccchhHhccc--CCCEEEEeeChhhcCCCCcceeEEEeC
Confidence 99999876 7788888999999999999999 55543 2223333332 233588899999999767 9988 8
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe-eeCCCCCCe
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE-VLGDNDSPV 400 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-v~~~~~~~~ 400 (489)
++++++.+...... + +.|++.++++.++|+.. ...++.+++++++.+++.+.|+++ ++. +..+ .+.+
T Consensus 231 ~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~ 299 (361)
T 3ftb_A 231 NKEIAAKIKAKQNP--W--NINCFAEMAAINCLKDT------NYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-HANF 299 (361)
T ss_dssp CHHHHHHHHTTSCT--T--CSCHHHHHHHHHTSSCH------HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-SSSE
T ss_pred CHHHHHHHHhhCCC--C--CCCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-CCeE
Confidence 99999999876543 3 48899988888887631 256788899999999999999998 676 5544 4666
Q ss_pred EEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 401 MPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 401 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+++.+.. ....++.+.|.++||.+.+..... +.+.+++|++++ +++++++++++|+++.+.
T Consensus 300 ~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~-~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 300 VLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFI-GLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp EEEEESS-SCHHHHHHHHHTTTEECEECTTST-TCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCC-CCHHHHHHHHHHCCeEEeeCccCC-CCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 7776654 467889999999999999743221 345689999984 889999999999887653
No 104
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.8e-30 Score=263.71 Aligned_cols=333 Identities=14% Similarity=0.152 Sum_probs=241.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC---CCEEEe-Ccc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK---PAAIVF-GMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~-~sG 170 (489)
++++|||+++. ..++ .++.+.+++.+++++.+.. .+....|. .++++.+++++ |. ++.+++ ++|
T Consensus 56 ~~~~i~l~~g~-~~~~-~~~~v~~a~~~~~~~~~~~--~Y~~~~g~----~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~ 127 (447)
T 3b46_A 56 GRELINLGQGF-FSYS-PPQFAIKEAQKALDIPMVN--QYSPTRGR----PSLINSLIKLYSPIYNTELKAENVTVTTGA 127 (447)
T ss_dssp TSCCEECCCCS-CSSC-CCHHHHHHHHHHTTSGGGG--SCCCTTCC----HHHHHHHHHHHTTTTTSCCCGGGEEEESHH
T ss_pred CCCeEEccCCC-CCCC-CCHHHHHHHHHHHhCcCCC--CCCCCCCC----HHHHHHHHHHHHHhcCCCCChhhEEEeCCH
Confidence 67899997543 2444 3588999998888652211 11111233 67777887776 32 134555 555
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-----------------CCHHHHHHHHHHHHhcCCC
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-----------------NTPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-----------------~d~~~Le~~l~~~~~~g~~ 233 (489)
++++..++.++.++||.|++..++|.++...++..|++++.++. .|+++|++.+..
T Consensus 128 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------- 200 (447)
T 3b46_A 128 NEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS------- 200 (447)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-------
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-------
Confidence 77788889999999999999999999999999999998887653 266777766542
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC--CCCccEEEcc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELC---KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD--TADVDIMMGT 308 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~---~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~--p~~~Di~~~t 308 (489)
++.+|+++++++++|.+. ++++|+++|++||++||+||+|+ .+..+|... ....++ ..+.|++++|
T Consensus 201 ------~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~--~~~~~g~~~-~~~~~~~~~~~~~i~i~S 271 (447)
T 3b46_A 201 ------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE--HLYFTDSFT-RIATLSPEIGQLTLTVGS 271 (447)
T ss_dssp ------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT--TCBCSSCCC-CGGGSCHHHHTTEEEEEE
T ss_pred ------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch--hcccCCCCc-CHHHcCCCCCCcEEEEec
Confidence 344566678899999885 48999999999999999999999 665555221 111221 1234899999
Q ss_pred cccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 309 FTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 309 ~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
+||++|.+| ||+++ ++++++.+........++ .+++.++++.++|+.... ....++.+++++++.+++.+.
T Consensus 272 ~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~a~~~aL~~~~~---~~~~~~~~~~~~~~~~~l~~~ 346 (447)
T 3b46_A 272 AGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFA--SPSPLQEACANSINDALK---IGYFEKMRQEYINKFKIFTSI 346 (447)
T ss_dssp HHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSS--CCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHH
T ss_pred CchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCC--CChHHHHHHHHHHhCCcc---hHHHHHHHHHHHHHHHHHHHH
Confidence 999999778 99999 999999887654333343 788888888888886410 124677889999999999999
Q ss_pred HHhCCCeeeCCCCCCeEEEEeCCC---------------CcHHHHHHHHh-hCCceEEee-cCCCcC---CCCCeEEEee
Q 046230 385 LQKMGFEVLGDNDSPVMPIMLYNP---------------AKIPAFSRECL-RQNVAVVTV-AFPATP---LLLARARICI 444 (489)
Q Consensus 385 L~~~g~~v~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~-~~Gi~v~~~-~~p~~~---~~~~~iRi~~ 444 (489)
|+++|+.+..+.++.++++.+... ....+++++|+ ++||.+.+. .|...+ .+.+++||++
T Consensus 347 L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~ 426 (447)
T 3b46_A 347 FDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAV 426 (447)
T ss_dssp HHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEEC
T ss_pred HHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEE
Confidence 999998887777788877776532 34568888887 479999873 232211 1368999999
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 046230 445 SASHTKEDLIKALEVISR 462 (489)
Q Consensus 445 ~~~~t~edid~~l~~l~~ 462 (489)
+ .++++|++++++|.+
T Consensus 427 ~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 427 C--KDDAYLENAVERLKL 442 (447)
T ss_dssp C--SCHHHHHHHHHHGGG
T ss_pred e--CCHHHHHHHHHHHHH
Confidence 5 589999999999976
No 105
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=1.4e-30 Score=260.50 Aligned_cols=332 Identities=11% Similarity=0.054 Sum_probs=239.6
Q ss_pred ceeEe-cccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 100 NRCLN-LGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 100 ~~~id-~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
++++| |++++|+|++++ |.+.+++.++++.++.. .....++..+...+|+++++++++.+..+++++|++++..++
T Consensus 3 ~~~~~~~~~~~~l~~~~~-p~~~~~~~~~~~~~~~~--~~~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al 79 (357)
T 3lws_A 3 NRLRTSFQQTTGQISGHG-KRNVGVLKTAFAAVADE--MASDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVAL 79 (357)
T ss_dssp CHHHHHHHTCSEESSBSS-CCBHHHHHHHHTTSCTT--CBCEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred chhhhHHHhhcccccCCC-CCCHHHHHHHHHHhhcc--cCcccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHH
Confidence 56677 689999999976 78999998888876522 233445666778999999999999998899999999998888
Q ss_pred hhhcCCCC--EEEEcCCCchHHHH---HHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 179 PVLMRKGS--LIISDSLNHNSIVN---GARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 179 ~al~~~g~--~Vl~~~~~h~~~~~---~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
.++..+++ .|+++.++|.+... .....|+.++.++.+ |+++|+++. + +.+|+++++
T Consensus 80 ~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--------------~-~~~v~~~~p 144 (357)
T 3lws_A 80 RIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALP--------------D-IACLLLELP 144 (357)
T ss_dssp HHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCC--------------S-CSEEEEESS
T ss_pred HHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCc--------------C-cceEEEEcc
Confidence 88888777 89999888877644 345668888888754 667766541 2 346777888
Q ss_pred CCCC-CCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEEEeCH
Q 046230 250 YSME-GELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSK 324 (489)
Q Consensus 250 ~s~~-G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~ 324 (489)
++++ |.+.+ +++|+++|++||++||+||+|..+..+..|....+.. ...|+++.|+||+| |+.||++++++
T Consensus 145 ~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~sK~~~~~~gg~~~~~~ 220 (357)
T 3lws_A 145 QREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA----GLFDSIYISFYKGLGGIAGAILAGPA 220 (357)
T ss_dssp BGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH----TTSSEEEEESSSTTCCSSCEEEEECH
T ss_pred cccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH----hcCCEEEEeccccCCCCceEEEEcCH
Confidence 8876 87765 8999999999999999999987332222222222221 12377888999999 66569999999
Q ss_pred HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee-CCCCCCeEE
Q 046230 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL-GDNDSPVMP 402 (489)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~-~~~~~~~~~ 402 (489)
++++.+......+..+.......++++.++|+.. .+.+++..++.+++.+.|+++ |+.+. .+..+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 291 (357)
T 3lws_A 221 AFCQTARIWKRRYGGDLISLYPYIVSADYYYELR---------KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFH 291 (357)
T ss_dssp HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHH---------TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEE
Confidence 9998886433211111223344455555666643 223445677888999999998 88873 456788888
Q ss_pred EEeCCC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCC---CCHHHHHHHHHHHHHHH
Q 046230 403 IMLYNP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISAS---HTKEDLIKALEVISRVG 464 (489)
Q Consensus 403 ~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~---~t~edid~~l~~l~~~~ 464 (489)
+.+... ....++.+.|.++||.+.+..++. | +..++|+++... .+++++++++++|.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~-~-~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 292 LHFDGQAADISPKLEQVQEETGLGFVGYLVDK-D-GYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp EEEESCHHHHHHHHHHHHHHHCEESCSCCEEC-S-SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred EEecCChHHHHHHHHHHHHhcCeEEecccccC-C-CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 877654 235678899999999998753332 2 446899988643 68899999999998764
No 106
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.97 E-value=5.5e-29 Score=254.06 Aligned_cols=339 Identities=14% Similarity=0.120 Sum_probs=232.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHh----CCC---CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFV----GKP---AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g~~---~~i~~~sG 170 (489)
|+.+|||++++|++.... ..+.+++.+++.+... ....+....|. .++++.+++++ +.+ +.+++++|
T Consensus 36 ~~~~i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~Y~~~~g~----~~lr~~la~~~~~~~~~~~~~~i~~t~g~ 110 (413)
T 3t18_A 36 REAVINAALGTLLDDKGK-IIALPSVYDRLDEMDRSHIASYAPIEGE----KDYRKIVIDTLFGPYKPEGYISAIATPGG 110 (413)
T ss_dssp GGGCEECCSCCCBCTTSC-BCCCHHHHHHHHHSCHHHHHSCCCTTCC----HHHHHHHHHHHHGGGCCSSEEEEEEESHH
T ss_pred ccceEeccccCccCCCCC-cCChHHHHHHHHhcCcccccCcCCCCCC----HHHHHHHHHHHhcccCccccCcEEEcCcc
Confidence 678999998888776544 2233333444433211 00011112244 56666666654 333 44455666
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC------CCHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++||.|+++.++|..+...++..|++++.++. .|+++|++.+++.... ..++++
T Consensus 111 ~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--------~~~~~v 182 (413)
T 3t18_A 111 TGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRD--------SDRIAS 182 (413)
T ss_dssp HHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHH--------CSEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhc--------CCCEEE
Confidence 77788889999999999999999999999999999999999875 1789999998763221 245567
Q ss_pred EEcCc-CCCCCCCCCh---HHHHHHHH------HcCcEEEEEcccccccccCCCCcc---cc-ccCCCCCCccEEEcccc
Q 046230 245 IVEGI-YSMEGELCKF---PEIIAICK------KYKAYIYLDEAHSIGAVGKTGRGV---CE-LLEVDTADVDIMMGTFT 310 (489)
Q Consensus 245 ive~v-~s~~G~~~~l---~~i~~l~~------~~~~~li~DEa~s~g~~g~~G~~~---~~-~~~v~p~~~Di~~~t~s 310 (489)
+++++ +|++|.+.+. ++|+++|+ +||++||+||+|+ .++.+|... .. ..++.++...|+++|||
T Consensus 183 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 260 (413)
T 3t18_A 183 LINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL--EFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMS 260 (413)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG--GGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHH
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc--cccCChhhHHHHHHHHhhcCCCeeEEEEEecC
Confidence 77766 8999999885 45556666 8999999999998 888777532 22 22333321237889999
Q ss_pred cccCCcc---eEEEe---CHHHHHHHHhhCCCcccc--cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG---SKELIQYLKYTCPAHLYA--TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 311 K~~g~~G---G~i~~---~~~~~~~l~~~~~~~~~~--~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
|++|.+| ||+++ ++++++.+.........+ .+.+++.++++.++|+...-.....+.++.+++++++.+++.
T Consensus 261 K~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 340 (413)
T 3t18_A 261 KSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFV 340 (413)
T ss_dssp HHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999778 99998 899999887643322111 236777777777666421000000134567788899999999
Q ss_pred HHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 383 SELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 383 ~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
+.|+++|+.+..+.++.++++.+ ....++.+.|.++||.+.+ +.+++||+++ ..+++++ +++|.+
T Consensus 341 ~~l~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~~--------g~~~iRis~~-~~~~~~~---l~~l~~ 405 (413)
T 3t18_A 341 TAAKENKLTMIPYFGGFFTFIPT---DKAFDIVKDLEKENIFTIP--------SAKGIRVAIC-GVGEEKI---PKLVQR 405 (413)
T ss_dssp HHHHHTTCCCBCCCSSSCEEEEC---SCHHHHHHHHHHTTEECEE--------CSSEEEECTT-TSCGGGH---HHHHHH
T ss_pred HHHHHcCCCccCCCceEEEEeCC---CCHHHHHHHHHhCCEEEec--------CCCceEEEEe-eCCHHHH---HHHHHH
Confidence 99999998887776676665543 3567889999999999995 2478999987 4455555 777777
Q ss_pred HHHHh
Q 046230 463 VGDLV 467 (489)
Q Consensus 463 ~~~~~ 467 (489)
+++++
T Consensus 406 ~l~~~ 410 (413)
T 3t18_A 406 LAFYT 410 (413)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 107
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.97 E-value=1.1e-28 Score=253.15 Aligned_cols=300 Identities=14% Similarity=0.136 Sum_probs=220.6
Q ss_pred HHHHHHHHHHhC--------C-CCEEEeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH-hcCCeEEEecCC--
Q 046230 149 NELEECVARFVG--------K-PAAIVFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN-- 215 (489)
Q Consensus 149 ~~l~~~la~~~g--------~-~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-~~g~~~~~~~~~-- 215 (489)
.++++.+|++++ . ++.+++++|+ +++..++.+++++|+.|+++.++|+++...+. ..|++++.++.+
T Consensus 86 ~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~ 165 (428)
T 1iay_A 86 PEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESS 165 (428)
T ss_dssp HHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCc
Confidence 788888888875 2 3556666665 56688889999999999999999999877554 679999888753
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 216 -----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
|+++|++.+++....+ .+..+|++.++++++|.+.+ +++|+++|++||++||+||+|+ .++.+
T Consensus 166 ~~~~~d~~~l~~~l~~~~~~~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~--~~~~~ 236 (428)
T 1iay_A 166 NNFKITSKAVKEAYENAQKSN-------IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYA--ATVFD 236 (428)
T ss_dssp TTTCCCHHHHHHHHHHHHHTT-------CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTG--GGCCS
T ss_pred cCCcCCHHHHHHHHHHHHhcC-------CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccc--ccccC
Confidence 7889998887532221 13445566677899999988 9999999999999999999999 55554
Q ss_pred CCccccccC---------CCCCCccEEEcccccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 046230 288 GRGVCELLE---------VDTADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISA 354 (489)
Q Consensus 288 G~~~~~~~~---------v~p~~~Di~~~t~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~ 354 (489)
|........ +.++. .+++.||||+||.+| ||+++ ++++++.+...... + +.+++.++++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~-viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~a~~~~ 311 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDL-VHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF--G--LVSTQTQYFLAAM 311 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTS-EEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT--S--CCCHHHHHHHHHH
T ss_pred CCCccCHHHhccccccccCCCCc-EEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc--c--cCCHHHHHHHHHH
Confidence 432111111 12311 288899999999778 99998 68888888754332 2 3778888887777
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCC------cHHHHHHHHhhC-CceEEe
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRECLRQ-NVAVVT 427 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~-Gi~v~~ 427 (489)
|+... ......++.+++++++.+++.+.|+++|+.+..+..+.++++.+.... ...++.+.|+++ ||.+.+
T Consensus 312 l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~ 389 (428)
T 1iay_A 312 LSDEK--FVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSP 389 (428)
T ss_dssp TTCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred hcChH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeC
Confidence 75320 000134678888899999999999999888766556777777765321 345789999987 999997
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
...... .+.+++||+++ .+|++++++++++|++++++
T Consensus 390 ~~~~~~-~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 390 GSSFEC-QEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp GGGGTC-SSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred chhhCC-CCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 432221 23578999997 68999999999999998764
No 108
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.97 E-value=1.3e-28 Score=251.59 Aligned_cols=343 Identities=13% Similarity=0.113 Sum_probs=237.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHh----CCC---CEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFV----GKP---AAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g~~---~~i~~~sG 170 (489)
|+.+|||+.++|+..... +.+.+++.+++.+... ....+....|. .++++.+++++ +.+ ..+++++|
T Consensus 37 ~~~~i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~i~~t~g~ 111 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGN-LVFLKTVKEEYLSLSDSEHVGYAPIAGI----PDFLCAAEKECFGNFRPEGHIRSIATAGG 111 (418)
T ss_dssp GGGCEECCSSCCBCTTSC-BCCCHHHHHHHHTCCHHHHHSCCCTTCC----HHHHHHHHHHHHGGGCCSSEEEEEEESHH
T ss_pred CCCeEECCCCcccCCCCC-ccccHHHHHHHHHhcccccCCCCCCCCh----HHHHHHHHHHHhcccCccccccEEECCch
Confidence 568999987776554433 2233444444433211 00011111233 67777777765 333 44445666
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEE
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMV 244 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~v 244 (489)
++++..++.++.++||.|+++.++|..+...++..|++++.++.+ |+++|++.+++.... ..+.++
T Consensus 112 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~--------~~~~~v 183 (418)
T 3rq1_A 112 TGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAK--------QTNVVV 183 (418)
T ss_dssp HHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHH--------CSEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhcc--------CCCEEE
Confidence 677788899999999999999999999999999999999998752 789999998763221 245567
Q ss_pred EEcCc-CCCCCCCCC---hHHHHHHHH------HcCcEEEEEcccccccccCCCCcc----ccccCCCCCCccEEEcccc
Q 046230 245 IVEGI-YSMEGELCK---FPEIIAICK------KYKAYIYLDEAHSIGAVGKTGRGV----CELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 245 ive~v-~s~~G~~~~---l~~i~~l~~------~~~~~li~DEa~s~g~~g~~G~~~----~~~~~v~p~~~Di~~~t~s 310 (489)
+++++ ++++|.+.+ +++|+++|+ +||++||+||+|+ .++.+|... ....++.++-+.|+++|||
T Consensus 184 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 261 (418)
T 3rq1_A 184 IFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL--DYSGEKDEVRAFFNKFSHLPKEILTCVCYSLS 261 (418)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG--GGSSCHHHHHGGGGGGTTCCTTEEEEEEEEST
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc--cccCChHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence 77766 899999988 455666666 8999999999998 787776421 1222333311127889999
Q ss_pred cccCCcc---eEEEe---CHHHHHHHHhhCCCccc--ccCCCHHHHHHHHHHHHHHHc-cCCCchHHHHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG---SKELIQYLKYTCPAHLY--ATSISPPAAEQIISAIKVILG-EDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 311 K~~g~~G---G~i~~---~~~~~~~l~~~~~~~~~--~~~~~p~~~aa~~a~L~~i~~-~~~~~~~~~~~~~~~~~~~~l 381 (489)
|++|.+| ||+++ ++++++.+......... ..+.+++.++++.+.|+...- +....+.++.+++++++.+++
T Consensus 262 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 341 (418)
T 3rq1_A 262 KGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIF 341 (418)
T ss_dssp TTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999778 99998 89999988764322111 123677777777776642100 000002345678889999999
Q ss_pred HHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 046230 382 RSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVIS 461 (489)
Q Consensus 382 ~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (489)
.+.|+++|+++..+.++.++++.+ ....++++.|.++||.+.+. .+++||+++ .+|++++++++++|+
T Consensus 342 ~~~L~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~g--------~~~iRis~~-~~~~~~i~~~~~~l~ 409 (418)
T 3rq1_A 342 KQEAAQVGLPMLPYRGGFFITIPT---DSANAICEELKKEHIYVIAL--------ANGIRIAAC-GIPKCQMTGLAEKIY 409 (418)
T ss_dssp HHHHHHHTCCCCCCCSSSEEEEEC---TTHHHHHHHHHHTTEECEEC--------SSEEEEEGG-GSCHHHHTTHHHHHH
T ss_pred HHHHHhcCCCCCCCCceEEEEcCC---CCHHHHHHHHHhCCEEEecC--------CCCeEEEEe-cCCHHHHHHHHHHHH
Confidence 999999898887776676655544 25678899999999999852 367999985 579999999999999
Q ss_pred HHHHHhC
Q 046230 462 RVGDLVG 468 (489)
Q Consensus 462 ~~~~~~~ 468 (489)
+++++++
T Consensus 410 ~~l~~~~ 416 (418)
T 3rq1_A 410 NAMKSLG 416 (418)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9998764
No 109
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=2.2e-29 Score=257.52 Aligned_cols=335 Identities=14% Similarity=0.197 Sum_probs=243.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHH--H-hCCCCC-CcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLK--K-YSPSTC-SSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYV 172 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~--~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ 172 (489)
+.-|+|+.+. ++.+|.+.+++.+++. + ++.... ......+..+...++++.++++++.+ ..++.++|++
T Consensus 22 ~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~ 96 (423)
T 3lvm_A 22 LPIYLDYSAT-----TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATE 96 (423)
T ss_dssp SSEECBTTTC-----CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHH
T ss_pred CCEeecCCCc-----CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHH
Confidence 4556676533 2346888888888877 3 332221 12222233566789999999999976 5666677788
Q ss_pred HHHHhHhhhc----CCCCEEEEcCCCchHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 173 TNSAILPVLM----RKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 173 a~~~~~~al~----~~g~~Vl~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
++..++.++. ++|+.|+++.+.|+++...+ ...|++++.++.+ |+++|++++++ +
T Consensus 97 a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~ 163 (423)
T 3lvm_A 97 SDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-------------D 163 (423)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-------------T
T ss_pred HHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-------------C
Confidence 8887777776 37999999999999987776 4459999998876 78888887753 4
Q ss_pred cEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eE
Q 046230 241 KIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GY 319 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~ 319 (489)
+.+|+++++++++|.+.++++|+++|++||++||+||+|+.|.+. +++...++|+++.|++|.+|+.| |+
T Consensus 164 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~g~G~ 234 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP---------IDLSQLKVDLMSFSGHKIYGPKGIGA 234 (423)
T ss_dssp EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTSCCSEEEEESTTTTSCSSCEE
T ss_pred cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------cChhhcCCCEEEechHHhcCCCCeEE
Confidence 567888999999999999999999999999999999999854321 11211234999999999988877 99
Q ss_pred EEeCHHHHHHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 046230 320 IAGSKELIQYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL 393 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~ 393 (489)
++++++.++.+.....+ .....+.++..++++.++++.+.. ..++.+++++++.+++++.|+++ |+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 309 (423)
T 3lvm_A 235 LYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKE-----EMATEMERLRGLRNRLWNGIKDIEEVYLN 309 (423)
T ss_dssp EEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred EEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 99988766655433221 012234678888888888887632 35788899999999999999988 88877
Q ss_pred CCCC---CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc------------C----CCCCeEEEeecCCCCHHHHH
Q 046230 394 GDND---SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT------------P----LLLARARICISASHTKEDLI 454 (489)
Q Consensus 394 ~~~~---~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~------------~----~~~~~iRi~~~~~~t~edid 454 (489)
.+.. ..++.+.+ ......++.+.|.+ |.+.+..+... + ...+.+||+++..+|++|++
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~ 386 (423)
T 3lvm_A 310 GDLEHGAPNILNVSF-NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID 386 (423)
T ss_dssp SCSTTBCTTEEEEEE-TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHH
T ss_pred CCccccCCCeEEEEe-CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHH
Confidence 6543 34566666 34456778888877 66654221110 0 01478999999899999999
Q ss_pred HHHHHHHHHHHHhC
Q 046230 455 KALEVISRVGDLVG 468 (489)
Q Consensus 455 ~~l~~l~~~~~~~~ 468 (489)
+++++|+++++++.
T Consensus 387 ~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 387 YTIELVRKSIGRLR 400 (423)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998775
No 110
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=9.8e-29 Score=247.90 Aligned_cols=325 Identities=16% Similarity=0.117 Sum_probs=234.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCcc-HHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMG-YVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~~~ 176 (489)
|+++|||+++. ..++ .+|.+.+++.+++++.. .. + .....++++++|++++.+ +.+++++| ++++..
T Consensus 23 ~~~~idl~~~~-~~~~-~~~~v~~a~~~~~~~~~-~y-------~-~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 23 PDQLLDFSANI-NPLG-MPVSVKRALIDNLDCIE-RY-------P-DADYFHLHQALARHHQVPASWILAGNGETESIFT 91 (364)
T ss_dssp GGGSEECSSCC-CTTC-CCHHHHHHHHHTGGGGG-SC-------C-CTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred ccceEEecccc-CCCC-CCHHHHHHHHHHHHHhh-cC-------C-CCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHH
Confidence 78899997654 3344 45888999888876521 11 1 112489999999999864 55666555 566677
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCC---HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT---PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d---~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
++.++ +++.|+++.++|+++...++..|++++.++.++ .+.+++.++.. . ++.++ |++..+++++
T Consensus 92 ~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~-~--------~~~~~-v~i~~p~npt 159 (364)
T 1lc5_A 92 VASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEAL-T--------PDLDC-LFLCTPNNPT 159 (364)
T ss_dssp HHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHC-C--------TTCCE-EEEESSCTTT
T ss_pred HHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhc-c--------CCCCE-EEEeCCCCCC
Confidence 77777 679999999999999999999999999888763 11123333321 0 12344 4445558899
Q ss_pred CCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEE-eCHHH
Q 046230 254 GELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIA-GSKEL 326 (489)
Q Consensus 254 G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~-~~~~~ 326 (489)
|.+.+ +++|+++|++||+++|+||+|+ .++.++....+..+. .+.|++++|+||++|.+| ||++ +++++
T Consensus 160 G~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 235 (364)
T 1lc5_A 160 GLLPERPLLQAIADRCKSLNINLILDEAFI--DFIPHETGFIPALKD--NPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA 235 (364)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTG--GGSTTCCCSGGGCTT--CTTEEEEEESTTTTTCTTTCCEEEECCCHHH
T ss_pred CCCCCHHHHHHHHHHhhhcCcEEEEECcCh--hhccCccchhhHhcc--CCCEEEEEECchhhcCCccceEEEEECCHHH
Confidence 99988 8999999999999999999999 555544433333222 334788999999998667 9999 99999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEe
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIML 405 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~ 405 (489)
++.+...... + +.|++.++++.++|+.- ...++.+++++++.+++.+.|+++ |+.+.+ ..++++++.+
T Consensus 236 ~~~l~~~~~~--~--~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~ 304 (364)
T 1lc5_A 236 MARMRRQQMP--W--SVNALAALAGEVALQDS------AWQQATWHWLREEGARFYQALCQLPLLTVYP-GRANYLLLRC 304 (364)
T ss_dssp HHHHHHHSCT--T--CSCHHHHHHHHHGGGCH------HHHHHHHHHHHHHHHHHHHHHHTSTTEEECC-CSSSEEEEEE
T ss_pred HHHHHHhCCC--C--CCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHhcCCCCEECC-CCCeEEEEEC
Confidence 9988876542 3 37888888888877631 146778888899999999999988 877754 4566777666
Q ss_pred CCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 406 YNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. ...++.+.|.++||.+.+..... +.+.+++||+++ +++|+++++++|+++++++
T Consensus 305 ~~--~~~~l~~~l~~~gi~v~~g~~~~-~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 305 ER--EDIDLQRRLLTQRILIRSCANYP-GLDSRYYRVAIR---SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp SC--TTCCHHHHHHTTTEECEECTTST-TCCTTEEEEECC---CHHHHHHHHHHHHHHC---
T ss_pred CC--cHHHHHHHHHHCCcEEeeCcccC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHhhcc
Confidence 53 23468889999999999743221 234579999973 6899999999999887654
No 111
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=1.9e-29 Score=258.89 Aligned_cols=332 Identities=14% Similarity=0.111 Sum_probs=243.6
Q ss_pred ceeEecccccccCCCCCCccc--hHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh-----CCC-CE---EEe-
Q 046230 100 NRCLNLGSYNYLGFAASDEYC--TPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV-----GKP-AA---IVF- 167 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v--~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-----g~~-~~---i~~- 167 (489)
+++|||+++.+..++. +|.+ .+++.+++.+.. .. .++......++++.+|+++ +.+ +. +++
T Consensus 47 ~~~i~l~~g~~~~~~~-~~~~~~~~a~~~~~~~~~--~~----~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t 119 (430)
T 2x5f_A 47 STTYNATIGMATNKDG-KMFASSLDAMFNDLTPDE--IF----PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVT 119 (430)
T ss_dssp TCSEECCCSSCEETTE-ECCCHHHHTTBSSCCGGG--TS----SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEE
T ss_pred CCcEEeeeeeccCCCC-chhhHHHHHHHHhcCccc--cc----ccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEc
Confidence 4589998665422332 4666 666666554311 11 1111222478999999998 642 33 455
Q ss_pred CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh-cCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 046230 168 GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG-SGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
Q Consensus 168 ~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~-~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~ 240 (489)
++|++++..++.++.++||.|+++.++|+++...++. .|++++.++.+ |+++|++.+++. +.+
T Consensus 120 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~ 189 (430)
T 2x5f_A 120 NALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY----------NKD 189 (430)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC----------CSS
T ss_pred CCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc----------CCC
Confidence 5557777888999999999999999999999999998 99999888752 678899888752 113
Q ss_pred cEEEEEcCcCCCCCCCCC---hHHHHHHHHH-----cCcEEEEEcccccccccCCCCc---cc-cccCCCCCCc-cEEEc
Q 046230 241 KIMVIVEGIYSMEGELCK---FPEIIAICKK-----YKAYIYLDEAHSIGAVGKTGRG---VC-ELLEVDTADV-DIMMG 307 (489)
Q Consensus 241 ~~~vive~v~s~~G~~~~---l~~i~~l~~~-----~~~~li~DEa~s~g~~g~~G~~---~~-~~~~v~p~~~-Di~~~ 307 (489)
+.++++..+++++|.+.+ +++|+++|++ ||+++|+||+|+ .+...|.. .. ...+..+.++ +|+++
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY--GLFYEDVYTQSLFTALTNLHSNAILPIRLD 267 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTT--TCBCSSSCCSCHHHHHHTTCCTTEEEEEEE
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcc--cccCCcccchHHHHHHhhccCCcceEEEEE
Confidence 344455555999999988 8999999999 999999999999 66655542 12 2222222111 57789
Q ss_pred ccccccCCcc---eEEEe---CHHHHHHHHhhCCC----cccccCCCHHHHHHHHHHHH-H---HHccCCCchHHHHHHH
Q 046230 308 TFTKSFGSCG---GYIAG---SKELIQYLKYTCPA----HLYATSISPPAAEQIISAIK-V---ILGEDGSSRGAQKLAR 373 (489)
Q Consensus 308 t~sK~~g~~G---G~i~~---~~~~~~~l~~~~~~----~~~~~~~~p~~~aa~~a~L~-~---i~~~~~~~~~~~~~~~ 373 (489)
||||+||.+| ||+++ ++++++.+...... ..+ +.|++.++++.++|+ . +. ..++.+++
T Consensus 268 s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~------~~~~~~~~ 339 (430)
T 2x5f_A 268 GATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNIS--SGPLPTQSAVKHVLKNNKQFDK------EIEQNIQT 339 (430)
T ss_dssp EHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHSCHHHHH------HHHHHHHH
T ss_pred ecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccC--CCChHHHHHHHHHHccChHHHH------HHHHHHHH
Confidence 9999999778 99999 99999888754322 223 388999999988887 3 31 33458888
Q ss_pred HHHHHHHHHHHHH----hCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCC
Q 046230 374 IRENSNFFRSELQ----KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASH 448 (489)
Q Consensus 374 ~~~~~~~l~~~L~----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~ 448 (489)
++++.+++.+.|+ +.|+.+..+.++.++++.+. .....++.+.|++ +||.+.+. +.+++||+++. .
T Consensus 340 ~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g-------~~~~iRis~~~-~ 410 (430)
T 2x5f_A 340 LKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL-------NATDIRIAFSC-V 410 (430)
T ss_dssp HHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC-------SSSEEEEEGGG-S
T ss_pred HHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC-------CCCeEEEEEec-C
Confidence 9999999999998 66888776666677788776 4567789999998 89999853 35789999974 5
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q 046230 449 TKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 449 t~edid~~l~~l~~~~~~~ 467 (489)
+++++++++++|.++++++
T Consensus 411 ~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 411 EKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp CGGGHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998765
No 112
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5.6e-29 Score=253.18 Aligned_cols=334 Identities=10% Similarity=0.084 Sum_probs=240.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCC--cchhHHHHHHHHHHHhCCC-CEEEeCcc-HHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGG--TLMVHNELEECVARFVGKP-AAIVFGMG-YVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~ 174 (489)
+..++|++++. ..++.+.+++.+++.++.....+ ...++ ..+...++++.+++++|.+ +.+++++| ++++
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al 99 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVG-AHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLL 99 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCS-SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHH
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCC-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHH
Confidence 45677765432 34688999999999874322111 11111 2466789999999999975 55666555 5555
Q ss_pred HHhHhhh---cCCCCEEEEcCCCchHHHHHHHh----cCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 175 SAILPVL---MRKGSLIISDSLNHNSIVNGARG----SGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 175 ~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
..++.++ .++|+.|+++.+.|.++...+.. .|++++.++.+ |+++|++.+++ ++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~-------------~~ 166 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK-------------ST 166 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT-------------TE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC-------------Cc
Confidence 6667666 68899999999999987655543 68999988876 78899887743 45
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcce-EE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGG-YI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~GG-~i 320 (489)
.+|+++++++++|.+.|+++|.++|+++|+++|+||+|+.|..... . ..+ ++|+++.|++|.+|+.+| ++
T Consensus 167 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~---~-~~~-----~~d~~~~s~~K~~g~~~G~~~ 237 (406)
T 3cai_A 167 RLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD---I-RET-----DADVVTVNAHAWGGPPIGAMV 237 (406)
T ss_dssp EEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC---H-HHH-----CCSEEEEEGGGGTSCSCEEEE
T ss_pred eEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC---c-hhc-----CCCEEEeehhhhcCCCcCeEE
Confidence 5777889999999999999999999999999999999985432111 1 112 238999999999886448 99
Q ss_pred EeCHHHHHHHHhhCCCc------cc-ccCCCHHHHHHHHHHHHHHHccCCC-----------chHHHHHHHHHHHHHHHH
Q 046230 321 AGSKELIQYLKYTCPAH------LY-ATSISPPAAEQIISAIKVILGEDGS-----------SRGAQKLARIRENSNFFR 382 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~------~~-~~~~~p~~~aa~~a~L~~i~~~~~~-----------~~~~~~~~~~~~~~~~l~ 382 (489)
++++++++.+......+ .+ ..+.++..++++.++++.+... +. ...++.+++++++.+++.
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (406)
T 3cai_A 238 FRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAAL-DESARGSRRERLAVSMQSADAYLNRVFDYLM 316 (406)
T ss_dssp ESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTS-STTCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHh-ccccccchhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99998887775443211 01 2346777887888888877421 10 025778888999999999
Q ss_pred HHHHhC-CCeeeCCC--CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC------CcCCCCCeEEEeecCCCCHHHH
Q 046230 383 SELQKM-GFEVLGDN--DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP------ATPLLLARARICISASHTKEDL 453 (489)
Q Consensus 383 ~~L~~~-g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p------~~~~~~~~iRi~~~~~~t~edi 453 (489)
+.|+++ |+.+..+. .++++++.+.. ....++.+.|.++||.+.+...+ ..+...+++||+++..+|++|+
T Consensus 317 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i 395 (406)
T 3cai_A 317 VSLRSLPLVMLIGRPEAQIPVVSFAVHK-VPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEV 395 (406)
T ss_dssp HHHHTCTTEEECCCCSSBCSEEEEEETT-BCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHH
T ss_pred HHHhcCCCeEEcCCccccCCEEEEEECC-cCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHH
Confidence 999997 77776543 35567776653 45678999999999999864310 1112347899999988999999
Q ss_pred HHHHHHHHH
Q 046230 454 IKALEVISR 462 (489)
Q Consensus 454 d~~l~~l~~ 462 (489)
++++++|++
T Consensus 396 ~~~~~~l~~ 404 (406)
T 3cai_A 396 DQLVRALAS 404 (406)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999875
No 113
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.94 E-value=6.8e-33 Score=281.15 Aligned_cols=345 Identities=13% Similarity=0.063 Sum_probs=251.9
Q ss_pred cCCCCCeEEEeeccccCCcccccccCccc--eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHH
Q 046230 72 SSAPDAWFDVVERFSNDSNKTLKRTNKVN--RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHN 149 (489)
Q Consensus 72 ~~~~G~~i~~~dr~~~~~~~~~~~~~~g~--~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (489)
.++.|+++||.+ |+ ++|||+++++ +++. +|.+.+++.+++.+...+. .+...
T Consensus 16 ~~~~g~~~~d~~---------------g~~~~~i~l~~~~~-~~~~-~~~v~~a~~~~~~~~~~~y---------~~~~~ 69 (392)
T 3b1d_A 16 RLSHHTYKWKET---------------ETDPQLLPAWIADM-DFEV-MPEVKQAIHDYAEQLVYGY---------TYASD 69 (392)
Confidence 468899999998 77 9999987664 5654 5889999999886521111 11146
Q ss_pred HHHHHHHHHhCC-------CCEEEeC-ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------
Q 046230 150 ELEECVARFVGK-------PAAIVFG-MGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------ 215 (489)
Q Consensus 150 ~l~~~la~~~g~-------~~~i~~~-sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------ 215 (489)
++++.+++++.. ++.++++ +|++++..++.++..+|+.|+++.++|+++...++..|++++.++.+
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 149 (392)
T 3b1d_A 70 ELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLF 149 (392)
Confidence 677777776531 3455554 55667788888889999999999999999998888888888877662
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 216 --TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 216 --d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
|+++|++.+++. +..+|+++++++++|.+.+ +++|+++|++||++||+||+|+ .+.++|..
T Consensus 150 ~~d~~~l~~~l~~~------------~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~g~~ 215 (392)
T 3b1d_A 150 QIDFEQLENDIVEN------------DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQ--DLTLFGHE 215 (392)
Confidence 567777777531 2234556778899998865 9999999999999999999999 77766654
Q ss_pred cccccCCCC--CCccEEEcccccccCCcc---eEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCC
Q 046230 291 VCELLEVDT--ADVDIMMGTFTKSFGSCG---GYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS 364 (489)
Q Consensus 291 ~~~~~~v~p--~~~Di~~~t~sK~~g~~G---G~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~ 364 (489)
....+.+.+ .+.+++++||||++|.+| ||+++++ ++++.+......+.++ +.+++.++++.++|+.. .
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~-----~ 289 (392)
T 3b1d_A 216 HVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHH-EVSSLGYIATETAYRYG-----K 289 (392)
Confidence 333444433 345688899999998668 9998864 5888887665544322 36788888888887632 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCeEEEEeCCC-CcHHHHHHHHh-hCCceEEeecCCCcCCCCCeE
Q 046230 365 SRGAQKLARIRENSNFFRSELQK-M-GFEVLGDNDSPVMPIMLYNP-AKIPAFSRECL-RQNVAVVTVAFPATPLLLARA 440 (489)
Q Consensus 365 ~~~~~~~~~~~~~~~~l~~~L~~-~-g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~i 440 (489)
...++.+++++++.+++.+.|++ + ++.+..+.++.++++.+... ....++.+.|+ ++||.+.+...+. +.+.+++
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~-~~~~~~i 368 (392)
T 3b1d_A 290 PWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG-SEGELHA 368 (392)
Confidence 25677788889999999999987 5 77776665565555555432 34567889997 6799999743322 2356789
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 441 RICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 441 Ri~~~~~~t~edid~~l~~l~~~~~ 465 (489)
||+++ .+++++++++++|.++++
T Consensus 369 Ri~~~--~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 369 RLNIA--APKSLVEEICKRIVCCLP 391 (392)
Confidence 99985 478999999999988764
No 114
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=3.4e-29 Score=254.53 Aligned_cols=338 Identities=18% Similarity=0.189 Sum_probs=241.3
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCcchhHHH----HHHHHHHHhCCCCEEE-eCccHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGTLMVHNE----LEECVARFVGKPAAIV-FGMGYV 172 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~~i~-~~sG~~ 172 (489)
++.++|+++++++ +|.+.+++.+++. .++.+.++++...|. ....+ +++.+++++|.+...+ +++|++
T Consensus 23 ~~~~~~~~~~~~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~ 96 (405)
T 2vi8_A 23 HAKIELIASENFV-----SRAVMEAQGSVLTNKYAEGYPGRRYYGGC-EYVDIVEELARERAKQLFGAEHANVQPHSGAQ 96 (405)
T ss_dssp HHSEECCTTCCCC-----CHHHHHHHTSGGGGCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH
T ss_pred hcceeeccCcccC-----CHHHHHHHHHHhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceEEEecCcHH
Confidence 3457888777766 5889999999885 444333222222222 22334 4469999999876654 689999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHHH-H--HHhcC--CeEEEecC------CCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIVN-G--ARGSG--ATIRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~~-~--~~~~g--~~~~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
++..++.++.++|+.|+++.++|+++.. . +...| ..++.++. .|+++|++.+.+. +.+
T Consensus 97 a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~~ 165 (405)
T 2vi8_A 97 ANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLH-----------RPK 165 (405)
T ss_dssp HHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH-----------CCS
T ss_pred HHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhc-----------CCe
Confidence 9988889989999999999999987643 1 12223 36666653 2789999988752 234
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-CcceEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCGGYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~GG~i 320 (489)
++++.++. .|...++++|.++|++||++||+||+|+.|..+. +. . ..++ ...|++++|+||+++ +.||++
T Consensus 166 ~v~~~~~~---~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~--~-~~~~--~~~di~~~s~sK~~~g~~gG~~ 236 (405)
T 2vi8_A 166 LIVAAAAA---YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA-GL--H-PNPV--PYAHFVTTTTHKTLRGPRGGMI 236 (405)
T ss_dssp EEEECCSS---CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TS--S-CCST--TTCSEEEEESSSTTCCCSCEEE
T ss_pred EEEEeCCC---CCccCCHHHHHHHHHHcCCEEEEEcccccccccc-Cc--C-CCcc--ccCCEEEEeccccCCCCCCeEE
Confidence 44432333 3556689999999999999999999999554322 11 1 1222 134899999999997 767999
Q ss_pred EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCC
Q 046230 321 AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-NDSP 399 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~~~ 399 (489)
++++++++.+......+.++ +.++..++++.++++.+.. ...++.+++++++.+++.+.|+++|+.+..+ ..++
T Consensus 237 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~aa~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 311 (405)
T 2vi8_A 237 LCQEQFAKQIDKAIFPGIQG-GPLMHVIAAKAVAFGEALQ----DDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNH 311 (405)
T ss_dssp EECHHHHHHHHHHHTTTTCS-SCCHHHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSS
T ss_pred EEcHHHHHHHHhhhcccccC-CCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCce
Confidence 99999998887654333332 3467778877888887631 1457889999999999999999999888754 3577
Q ss_pred eEEEEeCC-CCcHHHHHHHHhhCCceEEeecCC---CcCCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHHh
Q 046230 400 VMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFP---ATPLLLARARICISA----SHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 400 ~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p---~~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~~ 467 (489)
++++.+.. .....++.+.|.++||.+.+...| ..+...+.+|++++. .+|++|+++++++|+++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 312 LLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp EEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 77777753 235678899998899999975432 112234689999986 689999999999999988654
No 115
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.97 E-value=9.7e-29 Score=250.30 Aligned_cols=292 Identities=15% Similarity=0.202 Sum_probs=226.8
Q ss_pred chhHHHHHHHHHHHhCCC-C-EEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchH--HHHHHHhcCCeEEEecC-----
Q 046230 145 LMVHNELEECVARFVGKP-A-AIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNS--IVNGARGSGATIRVFQH----- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~-~-~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~--~~~~~~~~g~~~~~~~~----- 214 (489)
.++..++++.+++++|.+ + .+++ ++|++++..++.++..+|+.|++..+.|.+ +...++..|++++.++.
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 145 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEV 145 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCC
Confidence 467789999999999975 4 5555 566777888888889999999999999998 88888888999988874
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
.|+++|++.+++. +..+|+++++++++|.+.++++|.++|++||++||+||+|++|.. .
T Consensus 146 ~d~~~l~~~l~~~------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~---~------ 204 (393)
T 1vjo_A 146 FSLEELRTALETH------------RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGV---P------ 204 (393)
T ss_dssp CCHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTS---C------
T ss_pred CCHHHHHHHHhhC------------CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCc---C------
Confidence 4889999988752 233677789999999999999999999999999999999995432 1
Q ss_pred cCCCCCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhC---CCc--------------cccc-CCCHHHHHHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTC---PAH--------------LYAT-SISPPAAEQIISA 354 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~---~~~--------------~~~~-~~~p~~~aa~~a~ 354 (489)
.++...++|++++|++|+++++| |++++++++++.+.... ..+ .+.. +.+++.++++.++
T Consensus 205 ~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~a 284 (393)
T 1vjo_A 205 IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREA 284 (393)
T ss_dssp CCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHH
T ss_pred CcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHH
Confidence 11222345999999999997655 99999999998885421 111 1122 5788899999999
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC---CCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND---SPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAF 430 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~ 430 (489)
|+.+.. ...++.+++++++.+++.+.|+++|+++..+.+ ..++++.+.......++.+.|.++ ||.+.+...
T Consensus 285 l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 360 (393)
T 1vjo_A 285 LRLIAQ----EGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLG 360 (393)
T ss_dssp HHHHHH----HCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCG
T ss_pred HHHHHH----ccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCcc
Confidence 987631 134678899999999999999998888765432 356666665455678899999998 999996432
Q ss_pred CCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHH
Q 046230 431 PATPLLLARARICI-SASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 431 p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~ 464 (489)
+ ...+++||++ +...+++++++++++|++++
T Consensus 361 ~---~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 361 E---LAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp G---GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred c---cCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 2 2357899995 45667888999999998875
No 116
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=3.5e-28 Score=245.73 Aligned_cols=296 Identities=16% Similarity=0.187 Sum_probs=227.8
Q ss_pred chhHHHHHHHHHHHhCCC--CEE-EeCccHHHHHHhHhhhcCCCCEEEEcCCCchH--HHHHHHhcCCeEEEecCC----
Q 046230 145 LMVHNELEECVARFVGKP--AAI-VFGMGYVTNSAILPVLMRKGSLIISDSLNHNS--IVNGARGSGATIRVFQHN---- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~~i-~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~--~~~~~~~~g~~~~~~~~~---- 215 (489)
.+...++++.++++++.+ +.+ +.++|++++..++.++.++|+.|++..+.|.+ +...+...|++++.++.+
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 134 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEH 134 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCC
Confidence 456688999999999875 234 44778888888899999999999998877753 355677789998888743
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 216 -TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 216 -d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
|+++|++.+++. +..+|+++++++++|.+.++++|.++|++||++||+||+|++|.. .
T Consensus 135 ~d~~~l~~~i~~~------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~---------~ 193 (393)
T 3kgw_A 135 YTLQEVEEGLAQH------------KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGV---------P 193 (393)
T ss_dssp CCHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTS---------C
T ss_pred CCHHHHHHHHhhC------------CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCc---------c
Confidence 889999999762 344667778899999999999999999999999999999985532 2
Q ss_pred cCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhCCCc---------------------ccccCCCHHHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTCPAH---------------------LYATSISPPAAEQI 351 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~~~~---------------------~~~~~~~p~~~aa~ 351 (489)
++++..++|+++.|++|++ |+.| |++++++++++.+....... ....+.++..++++
T Consensus 194 ~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 273 (393)
T 3kgw_A 194 IYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCL 273 (393)
T ss_dssp CCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH
T ss_pred cchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHH
Confidence 2222234589999999988 4556 99999999999887533211 11234678888888
Q ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC----CCeEEEEeCCCCcHHHHHHHHhhC-CceEE
Q 046230 352 ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND----SPVMPIMLYNPAKIPAFSRECLRQ-NVAVV 426 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~ 426 (489)
.++++.+..+ ..++.+++++++.+++.+.|+++|+.+..... ..++++.+.......++.+.|+++ ||.+.
T Consensus 274 ~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 349 (393)
T 3kgw_A 274 RESLALIAEQ----GLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEIS 349 (393)
T ss_dssp HHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECB
T ss_pred HHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEe
Confidence 8888876321 35788999999999999999999887753222 345556665556678899999998 99998
Q ss_pred eecCCCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 427 TVAFPATPLLLARARICI-SASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 427 ~~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+... +...+++|+++ +...|++|+++++++|+++++++.
T Consensus 350 ~g~~---~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 350 GGLG---PTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp CCCG---GGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred CCcc---cCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 5332 33467999998 666799999999999999998775
No 117
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=3.8e-29 Score=254.28 Aligned_cols=340 Identities=17% Similarity=0.157 Sum_probs=234.7
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHH--hC--CCCEEEeCccHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARF--VG--KPAAIVFGMGYVTN 174 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~--~g--~~~~i~~~sG~~a~ 174 (489)
|+++|||+++.+ .++ .+|.+.+++.+++++.+.... ...++......++++.+|++ .| .++.+++++|++++
T Consensus 32 ~~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~a 107 (400)
T 3asa_A 32 QHTVINLSIGDT-TQP-LNASVAEAFASSIARLSSPTT--CRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVD 107 (400)
T ss_dssp TSCCEECSSCCC-CCC-CCHHHHHHHHHHHHHHTSSSC--CCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred CCceEeccCCCC-CCC-CCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHH
Confidence 567899976653 343 358899999999987643211 11122223458999999999 46 34667777776554
Q ss_pred -HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCe-EEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 175 -SAILPVLMRKGSLIISDSLNHNSIVNGARGSGAT-IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 175 -~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~-~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
..+ ..+..+|+.|+++.++|.++...++..|.+ ++.++.++...+...+++. +..++ |++.+++++
T Consensus 108 l~~~-~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~----------~~~~~-v~l~~p~np 175 (400)
T 3asa_A 108 LFRL-LSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED----------THIDI-LCLCSPNNP 175 (400)
T ss_dssp HHHH-HHHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT----------CCCSE-EEEESSCTT
T ss_pred HHHH-HHHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc----------cCccE-EEEeCCCCC
Confidence 444 455578999999999999999888889998 8888765321111001000 12344 444578899
Q ss_pred CCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC-CCccEEEcccccccCCcc---eEEEeCHH
Q 046230 253 EGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT-ADVDIMMGTFTKSFGSCG---GYIAGSKE 325 (489)
Q Consensus 253 ~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p-~~~Di~~~t~sK~~g~~G---G~i~~~~~ 325 (489)
+|.+.+ +++|+++|+++|+++|+||+|+ .++..|........++. .+.+++++||||++|.+| ||++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~ 253 (400)
T 3asa_A 176 TGTVLNKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQE 253 (400)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTG--GGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTT
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEchhh--hhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChh
Confidence 999877 6789999999999999999999 66665543222333321 234588899999999768 99999988
Q ss_pred H-------HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 046230 326 L-------IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDS 398 (489)
Q Consensus 326 ~-------~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 398 (489)
+ ++.+........+ .+.|++.++++.++|+.. +.++.+++++++.+++.+.|+++|+.+..+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 325 (400)
T 3asa_A 254 LTYADGHFVIQDWERFLSTTF-NGASIPAQEAGVAGLSIL-------PQLEAIHYYRENSDLLRKALLATGFEVFGGEHA 325 (400)
T ss_dssp CBCTTSCBHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHT-------TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred hccchhhhHHHHHHHHhccCc-cCCChHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCc
Confidence 7 5655432221222 237888888888887742 456788899999999999999999988766667
Q ss_pred CeEEEE-eCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIM-LYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~-~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++++. +.......++.+.|+++ ||.+.+...+. +.+.+++||++ ..|++++++++++|++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~-~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 326 PYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFG-RSGSGFVRFSS--LGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp SEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGC-GGGTTCEEEEC--CSCHHHHHHHHHHHHC-----
T ss_pred eEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhC-CCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhh
Confidence 888887 65443445688888765 99999743222 23457899994 689999999999999887654
No 118
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=1.1e-28 Score=249.33 Aligned_cols=317 Identities=17% Similarity=0.211 Sum_probs=234.6
Q ss_pred CCCccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhh-cCCCCEEEE
Q 046230 115 ASDEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILPVL-MRKGSLIIS 190 (489)
Q Consensus 115 ~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al-~~~g~~Vl~ 190 (489)
+.++.+.+++.+++.+... +..+............++++.+++++|.+ ..++.++|++++..++.++ .++|+.|++
T Consensus 27 ~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~ 106 (390)
T 1elu_A 27 ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILL 106 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEE
Confidence 3457899999999887421 11000011011356789999999999975 4555577788888888888 789999999
Q ss_pred cCCCchHHHHH----HHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh
Q 046230 191 DSLNHNSIVNG----ARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF 259 (489)
Q Consensus 191 ~~~~h~~~~~~----~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l 259 (489)
+.++|+++... ++..|++++.++.+ |+++|++.+.+ ++.+|+++++++++|.+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~~~~nptG~~~~~ 173 (390)
T 1elu_A 107 TDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-------------KTRLVILSHLLWNTGQVLPL 173 (390)
T ss_dssp ETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-------------TEEEEEEESBCTTTCCBCCH
T ss_pred ecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-------------CceEEEEeccccCCceecCH
Confidence 99999997654 45679999888863 45666665532 45677789999999999999
Q ss_pred HHHHHHHH----HcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccc-ccCCcc-eEEEeCHHHHHHHHhh
Q 046230 260 PEIIAICK----KYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTK-SFGSCG-GYIAGSKELIQYLKYT 333 (489)
Q Consensus 260 ~~i~~l~~----~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK-~~g~~G-G~i~~~~~~~~~l~~~ 333 (489)
++|.++|+ +||+++|+||+|++|... .++...++|++++|++| .+|+.| |++++++++++.+...
T Consensus 174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~ 244 (390)
T 1elu_A 174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPT 244 (390)
T ss_dssp HHHHHHHHHCCSSSCCEEEEECTTTBTTBC---------CCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCC
T ss_pred HHHHHHHhhhhhhcCcEEEEEcccccCCcC---------CChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCc
Confidence 99999999 999999999999854321 12222234999999999 556667 9999999888776542
Q ss_pred CCCc-------------------cc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046230 334 CPAH-------------------LY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV 392 (489)
Q Consensus 334 ~~~~-------------------~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v 392 (489)
..++ .+ ..+.++..++++.++++.+... +..++.+++++++.+++.+.|+++ |+.+
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 321 (390)
T 1elu_A 245 YVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQ---GTAEERYQAICQRSEFLWRGLNQLPHVHC 321 (390)
T ss_dssp SCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred cccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 2110 11 1246777788888888876321 136778999999999999999998 8887
Q ss_pred eCC--CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 393 LGD--NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 393 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
..+ ..+.++.+.+.......++.+.|.++||.+.+.. ..+++||+++..+|++|+++++++|++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~------~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 322 LATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA------DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp SCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET------TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred ecCccccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC------CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 642 3466777766544567789999999999998643 347899999889999999999999865
No 119
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.3e-28 Score=242.64 Aligned_cols=329 Identities=12% Similarity=0.076 Sum_probs=232.8
Q ss_pred CCCCCeEEEeeccccCCcccccccCccceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHH
Q 046230 73 SAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNEL 151 (489)
Q Consensus 73 ~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l 151 (489)
++.|.++++.+ |+++|||+++ ++++ .+|.+.+++.+++..+.. . +.. ...++
T Consensus 3 ~~~g~~~~~~~---------------g~~~id~~~~~~~~~---~~~~v~~a~~~~~~~~~~-y-------~~~-~~~~l 55 (350)
T 3fkd_A 3 FGHGDEGITPL---------------SSEIVNFSTTVWTDG---DKDHLEKHLVENLNCIRH-Y-------PEP-DAGTL 55 (350)
T ss_dssp ----------------------------CCEECSCCSCCCS---CCHHHHHHHHHTGGGGGS-C-------CCT-TCHHH
T ss_pred ccccchHhhhc---------------cccEEEccCCCCCCC---CCHHHHHHHHHhHhHHhc-C-------CCC-cHHHH
Confidence 45677888887 8999999866 3333 357888888887743211 1 111 12689
Q ss_pred HHHHHHHhCCC-CEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-CCHHHHHHHHHHHH
Q 046230 152 EECVARFVGKP-AAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-NTPSHLEEVLREQI 228 (489)
Q Consensus 152 ~~~la~~~g~~-~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~Le~~l~~~~ 228 (489)
++++|++++.+ +.+++ ++|++++..++.++. ||.|+++.++|.++...++..|++++.++. ++.+.+..
T Consensus 56 r~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~------ 127 (350)
T 3fkd_A 56 RQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF------ 127 (350)
T ss_dssp HHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC------
T ss_pred HHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc------
Confidence 99999999864 45555 555566677777777 899999999999999999999999999988 54333221
Q ss_pred hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC-cEEEEEcccccccccCCCCccccccCCCCCCccEEEc
Q 046230 229 AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK-AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMG 307 (489)
Q Consensus 229 ~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~-~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~ 307 (489)
++.+ +|++..+++++|.+.+++++.++++.++ .+||+||+|+ .++..+.......+ ..+.+++++
T Consensus 128 ---------~~~~-~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~--~~~~~~~~~~~~~~--~~~~~i~~~ 193 (350)
T 3fkd_A 128 ---------SNMD-FCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYV--SFTTEEVIRPADIK--GRKNLVMVY 193 (350)
T ss_dssp ---------TTCS-EEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTT--TSCSSCCCCGGGGT--TCSSEEEEE
T ss_pred ---------CCCC-EEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchh--hhccCcchhhHHhh--cCCCEEEEe
Confidence 1234 4556788999999999999999999886 7999999998 67766654322222 234468899
Q ss_pred ccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 308 TFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 308 t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
||||.+|.+| ||+++++++++.+...... + +.+++.++++.++|+... ...+ .+++..++.+++.+.
T Consensus 194 S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~~~~l~~~ 263 (350)
T 3fkd_A 194 SFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP--W--AVNALAIEAAKFILIHPA-----QFTL-PIRKWQRNTVDFITA 263 (350)
T ss_dssp ESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT--T--CSCHHHHHHHHHHHHCTT-----TTCC-CHHHHHHHHHHHHHH
T ss_pred cCchhccCcchheEeEEeCHHHHHHHHHhCCC--C--CCCHHHHHHHHHHHhCHH-----HHHH-HHHHHHHHHHHHHHH
Confidence 9999999767 9999999999999876543 2 388888888888887431 1122 233334888999999
Q ss_pred HHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 385 LQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 385 L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
|+++ ++.+.+ ..+.++++.+... ...++.+.|.+ +||.+.+...+. +.+.+++||+++ +++++++++++|++
T Consensus 264 L~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~-~~~~~~iRis~~---~~~~~~~l~~al~~ 337 (350)
T 3fkd_A 264 LNRLDGVEVHP-SGTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFR-GLDESYVRITTQ---RPAQNQLFIKALET 337 (350)
T ss_dssp HHHSTTEEECC-CSSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTST-TCCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred HhcCCCcEECC-CCCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCC-CCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 9998 887754 4466677777654 67889999999 899999743322 345689999984 88999999999988
Q ss_pred HHHH
Q 046230 463 VGDL 466 (489)
Q Consensus 463 ~~~~ 466 (489)
+.++
T Consensus 338 ~~~~ 341 (350)
T 3fkd_A 338 FLEK 341 (350)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 7654
No 120
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=2.7e-28 Score=245.21 Aligned_cols=322 Identities=17% Similarity=0.167 Sum_probs=234.4
Q ss_pred CCccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhhhc----CCCCEE
Q 046230 116 SDEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPVLM----RKGSLI 188 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~al~----~~g~~V 188 (489)
.+|.+.+++.+++.+... .........+..+...++++.++++++.+ +.+++ ++|++++..++.++. ++|+.|
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~v 91 (382)
T 4hvk_A 12 VDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHI 91 (382)
T ss_dssp CCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEE
T ss_pred CCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEE
Confidence 368899999999877322 11111112234566779999999999975 44555 555667788888887 899999
Q ss_pred EEcCCCchHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH
Q 046230 189 ISDSLNHNSIVNGARG---SGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP 260 (489)
Q Consensus 189 l~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~ 260 (489)
+++.+.|+++...+.. .|++++.++.+ |+++|++.+++ ++.+|+++++++++|.+.+++
T Consensus 92 i~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~~~~nptG~~~~~~ 158 (382)
T 4hvk_A 92 LVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-------------DTILVSVQHANNEIGTIQPVE 158 (382)
T ss_dssp EEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-------------TEEEEECCSBCTTTCBBCCHH
T ss_pred EECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-------------CceEEEEECCCCCceeeCCHH
Confidence 9999999998776555 58999988865 78888887753 456888899999999999999
Q ss_pred HHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCCc--
Q 046230 261 EIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPAH-- 337 (489)
Q Consensus 261 ~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~~-- 337 (489)
+|.++|++||+ +|+||+|+.|.+. +++...++|+++.|++|.+|+.| |+++.+++. .+.......
T Consensus 159 ~i~~l~~~~~~-li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~ 226 (382)
T 4hvk_A 159 EISEVLAGKAA-LHIDATASVGQIE---------VDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQ 226 (382)
T ss_dssp HHHHHHSSSSE-EEEECTTTBTTBC---------CCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCT
T ss_pred HHHHHHHHcCE-EEEEhHHhcCCCC---------CCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCC
Confidence 99999999999 9999999855331 11111134899999999988777 888776654 121111100
Q ss_pred ---ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC---CCeEEEEeCCCCc
Q 046230 338 ---LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND---SPVMPIMLYNPAK 410 (489)
Q Consensus 338 ---~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~---~~~~~~~~~~~~~ 410 (489)
....+.++..++++.++++.+.. ..++.+++++++.+++.+.|+++ ++.+..+.. ..++.+.+. ...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 300 (382)
T 4hvk_A 227 ENGLRSGSENVPSIVGFGKAAEITAM-----EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIE 300 (382)
T ss_dssp GGGTSCSCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TCC
T ss_pred cCccccCCcCHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-CCC
Confidence 01234677888888888886531 55788999999999999999987 777765432 235556554 345
Q ss_pred HHHHHHHHhhCCceEEeecCCCcCC----------C------CCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 411 IPAFSRECLRQNVAVVTVAFPATPL----------L------LARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p~~~~----------~------~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
..++.+.|.++||.+.+...+..+. + .+++||+++..+|++|+++++++|+++++++.
T Consensus 301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~ 374 (382)
T 4hvk_A 301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999998643222111 0 57899999988999999999999999988764
No 121
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.97 E-value=1.7e-28 Score=247.27 Aligned_cols=331 Identities=17% Similarity=0.163 Sum_probs=238.3
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHhCCCCCC-cccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhH
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCS-SRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAIL 178 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~ 178 (489)
|+|++++ ++.++.+.+++.+++.+......+ +....+..+...++++.+++++|.+ +.+++ ++|++++..++
T Consensus 3 yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 77 (382)
T 4eb5_A 3 YFDYTSA-----KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAI 77 (382)
T ss_dssp BCBTTTC-----CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHH
T ss_pred eeccCCC-----CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHH
Confidence 5666533 234789999999998863211111 1111123467789999999999975 45555 66778888888
Q ss_pred hhhc----CCCCEEEEcCCCchHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 179 PVLM----RKGSLIISDSLNHNSIVNGARG---SGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 179 ~al~----~~g~~Vl~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
.++. ++|+.|+++.+.|+++...+.. .|++++.++.+ |+++|++.+++ ++.+|++
T Consensus 78 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~~~~v~~ 144 (382)
T 4eb5_A 78 IGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-------------DTILVSV 144 (382)
T ss_dssp HHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-------------TEEEEEC
T ss_pred HHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-------------CCeEEEE
Confidence 8887 8999999999999998777654 58898888763 78888877643 3457788
Q ss_pred cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHH
Q 046230 247 EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKE 325 (489)
Q Consensus 247 e~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~ 325 (489)
+++++++|.+.++++|.++|++||++ |+||+|++|... .+.... ++|++++|++|.+|+.| |+++.+++
T Consensus 145 ~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~------~~~~~~---~~di~~~s~sK~~g~~g~G~~~~~~~ 214 (382)
T 4eb5_A 145 QHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIE------VDVEKI---GADMLTISSNDIYGPKGVGALWIRKE 214 (382)
T ss_dssp CSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBC------CCHHHH---TCSEEEEETGGGTCCSSCEEEEEETT
T ss_pred eccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcc------cCcccc---CCCEEEeehHHhcCCCceEEEEEccc
Confidence 89999999999999999999999999 999999854221 011111 23899999999988777 88888765
Q ss_pred HHHHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC--
Q 046230 326 LIQYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND-- 397 (489)
Q Consensus 326 ~~~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~-- 397 (489)
. .+.....+ .....+.++..++++.++++.+.. ..++.+++++++.+++.+.|+++ |+.+..+..
T Consensus 215 ~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 287 (382)
T 4eb5_A 215 A--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAM-----EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKR 287 (382)
T ss_dssp C--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSB
T ss_pred c--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccC
Confidence 3 11111110 011224667777777888887631 35778899999999999999988 777765432
Q ss_pred -CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcC----------------CCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 398 -SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATP----------------LLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 398 -~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~----------------~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
+.++++.+. .....++.+.|.++||.+.+..+.... .+.+.+||+++..+|++|+++++++|
T Consensus 288 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (382)
T 4eb5_A 288 LPNNVNVRFS-YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp CTTEEEEEET-TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEeC-CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHH
Confidence 456667665 345778999999999999863321100 12578999998889999999999999
Q ss_pred HHHHHHhC
Q 046230 461 SRVGDLVG 468 (489)
Q Consensus 461 ~~~~~~~~ 468 (489)
++++++++
T Consensus 367 ~~~~~~~~ 374 (382)
T 4eb5_A 367 PGVIERLR 374 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 122
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=1.5e-27 Score=236.27 Aligned_cols=310 Identities=13% Similarity=0.125 Sum_probs=233.5
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-H
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~ 175 (489)
.+++|||+++ |+++. +|.+.+++.+++..+... ......++++.+|++++.+ +.+++++|+++. .
T Consensus 15 ~~~~i~l~~n~~~~~~---~~~v~~a~~~~~~~~~~y---------~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~ 82 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAV---EPRVQAAIAAAAARINRY---------PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 82 (337)
T ss_dssp CCCCEECSSCCCCSCC---CHHHHHHHHHHGGGTTSC---------CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred CCCceEeeCCCCCCCC---CHHHHHHHHHhhhhhccC---------CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHH
Confidence 5679999877 66653 378889988877653211 1345689999999999975 577787777655 6
Q ss_pred HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 176 AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 176 ~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
.++.++ +|+.|+++.++|.++...++..|++++.++.+ |+++|++. .++.++++.+++
T Consensus 83 ~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---------------~~~~~v~i~~p~ 145 (337)
T 3p1t_A 83 RISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---------------SRDDCVVLANPS 145 (337)
T ss_dssp HHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---------------CTTEEEEEESSC
T ss_pred HHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---------------cCCCEEEEeCCC
Confidence 666666 89999999999999999999999999988754 66666543 123467778889
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHHH
Q 046230 251 SMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELI 327 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~ 327 (489)
+++|.+.+++++.++|+++++ +|+||+|+ .++..+.... ...+.+++++||||.+|.+| ||++++++++
T Consensus 146 nptG~~~~~~~l~~l~~~~~~-~ivDea~~--~~~~~~~~~~-----~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~ 217 (337)
T 3p1t_A 146 NPTGQALSAGELDQLRQRAGK-LLIDETYV--DYSSFRARGL-----AYGENELVFRSFSKSYGLAGLRLGALFGPSELI 217 (337)
T ss_dssp TTTCCCCCHHHHHHHHHHCSE-EEEECTTG--GGSSCSSSCC-----CCBTTEEEEEESSSTTCCTTTCCEEEECCHHHH
T ss_pred CCCCCCCCHHHHHHHHHhCCc-EEEECCCh--hhcccccccc-----ccCCCEEEEeeCchhccCcchheEEEEeCHHHH
Confidence 999999999999999999997 55699998 6665443211 11334799999999998667 9999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC
Q 046230 328 QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN 407 (489)
Q Consensus 328 ~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~ 407 (489)
+.+...... + +.+++.++++.++|+.. ...++.++++.++.+++.+.|+++|+.+..+. +.++++....
T Consensus 218 ~~l~~~~~~--~--~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~ 286 (337)
T 3p1t_A 218 AAMKRKQWF--C--NVGTLDLHALEAALDND------RAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENAA 286 (337)
T ss_dssp HHHHTTSCT--T--CSCHHHHHHHHHHHTCH------HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCS-SSEEEEECTT
T ss_pred HHHHhhcCC--C--CCCHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHCcCEECCCC-CeEEEEEcCC
Confidence 988765432 2 37788887777777532 13466777888889999999999988876544 5555555432
Q ss_pred CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
..++.+.|.++||.+.+...+.. .+++|++++ +++++++++++|+++.+
T Consensus 287 ---~~~~~~~l~~~gi~v~~g~~~~~---~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 287 ---GERTLRFLRERGIQVKDAGQFGL---HHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp ---THHHHHHHHHTTEECEEGGGGTC---CSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHCCeEEEECccCCC---CCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 35678888999999997543322 479999984 79999999999987653
No 123
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=1.2e-27 Score=242.10 Aligned_cols=321 Identities=13% Similarity=0.103 Sum_probs=235.8
Q ss_pred CCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhhhcCCCCEEEEcCC
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPVLMRKGSLIISDSL 193 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~ 193 (489)
.++.+.+++.+++.. . ......+...++++.++++++.+ +.+++ ++|++++..++.++.++|+.|+++.+
T Consensus 20 ~~~~v~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~ 91 (392)
T 2z9v_A 20 AYPEVLRGLGRTVLY----D----YDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLAS 91 (392)
T ss_dssp CCHHHHHHTTSCCCC----T----TSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEES
T ss_pred CCHHHHHHHhccccc----c----ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecC
Confidence 356666666554432 1 01123456789999999999975 45555 66778888888888899999999999
Q ss_pred CchHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH
Q 046230 194 NHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC 266 (489)
Q Consensus 194 ~h~~~~--~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~ 266 (489)
.|.+.. ..++..|++++.++.+ |+++|++.+++. .++.+|+++++++++|.+.++++|.++|
T Consensus 92 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----------~~~~~v~~~~~~nptG~~~~l~~i~~l~ 160 (392)
T 2z9v_A 92 GVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH-----------PEITVVSVCHHDTPSGTINPIDAIGALV 160 (392)
T ss_dssp SHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC-----------TTCCEEEEESEEGGGTEECCHHHHHHHH
T ss_pred CcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC-----------CCCcEEEEeccCCCCceeccHHHHHHHH
Confidence 988763 2234468888888753 789999988641 1334677789999999999999999999
Q ss_pred HHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhC----------
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTC---------- 334 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~---------- 334 (489)
++||+++|+||+|++|.... +.... ++|++++|++|++ |+.| |++++++++++.++...
T Consensus 161 ~~~~~~li~D~a~~~g~~~~------~~~~~---~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 231 (392)
T 2z9v_A 161 SAHGAYLIVDAVSSFGGMKT------HPEDC---KADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSI 231 (392)
T ss_dssp HHTTCEEEEECTTTBTTBSC------CGGGG---TCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCS
T ss_pred HHcCCeEEEEcccccCCccc------ccccc---cceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccH
Confidence 99999999999998543211 11111 2489999999976 4557 99999999988886421
Q ss_pred --------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CC---CCCeEE
Q 046230 335 --------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG-DN---DSPVMP 402 (489)
Q Consensus 335 --------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~-~~---~~~~~~ 402 (489)
.......+.++..++++.++|+.+... ..++.+++++++.+++++.|+++|+.+.. +. .+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~----g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 307 (392)
T 2z9v_A 232 VDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNE----GPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTA 307 (392)
T ss_dssp GGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEE
T ss_pred HHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEE
Confidence 011122346777777788888876320 15678899999999999999998887765 32 466777
Q ss_pred EEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecC-CCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 403 IMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISA-SHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~-~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
+.+.......++.++|.++ ||.+.+... +...+.+||++.. .+|++|+++++++|++++++++.+.
T Consensus 308 ~~~~~~~~~~~l~~~L~~~~gi~v~~g~~---~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 375 (392)
T 2z9v_A 308 VRTPDGVDEKALRQAARARYGVVFSSGRG---ETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGRKL 375 (392)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCG---GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EECCCCCCHHHHHHHHHhcCCEEEecCCC---CCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCCCc
Confidence 7765455678899999998 999986332 2345789999644 7999999999999999999887654
No 124
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.96 E-value=1.7e-27 Score=249.14 Aligned_cols=333 Identities=12% Similarity=0.086 Sum_probs=233.5
Q ss_pred CccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHh----C----CCCEEEeCccHHHHHHhHhhhc-CCCC
Q 046230 117 DEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFV----G----KPAAIVFGMGYVTNSAILPVLM-RKGS 186 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sG~~a~~~~~~al~-~~g~ 186 (489)
++.+.+++.+++.+.+. +...+....|. .++++.+++++ | .++.+++++|++++..++.++. ++||
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 183 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGI----HGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKD 183 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCC----HHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcCh----HHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCC
Confidence 45677777777776532 33334444455 56666666665 3 2344445556677788888887 8999
Q ss_pred EEEEcCCCchHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-
Q 046230 187 LIISDSLNHNSIVNGARGSGATIRVFQ-------HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK- 258 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~- 258 (489)
.|+++.++|.++...++..|++++.++ ..|+++|++.|++...++ .+..+|++.+.+|++|.+.+
T Consensus 184 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-------~~~k~ivl~~p~NPtG~~~s~ 256 (500)
T 3tcm_A 184 GILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRG-------INVRALVVINPGNPTGQVLAE 256 (500)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTT-------CEEEEEEEESSCTTTCCCCCH
T ss_pred EEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcC-------CCceEEEEECCCCCCcccCCH
Confidence 999999999999999999999999887 348999999998754332 12334444577899998866
Q ss_pred --hHHHHHHHHHcCcEEEEEcccccccccCCCCc--cc---cccCC-CCCCccEEEccccccc-CCcc---eEEEe---C
Q 046230 259 --FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG--VC---ELLEV-DTADVDIMMGTFTKSF-GSCG---GYIAG---S 323 (489)
Q Consensus 259 --l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~--~~---~~~~v-~p~~~Di~~~t~sK~~-g~~G---G~i~~---~ 323 (489)
+++|+++|++||+++|+||+|....++..... .. ..++. ......|+++||||+| |.+| ||+++ +
T Consensus 257 ~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 336 (500)
T 3tcm_A 257 ENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS 336 (500)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC
Confidence 77888889999999999999994444322221 11 12222 1111247789999999 7667 99987 8
Q ss_pred HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH-----------HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 046230 324 KELIQYLKYTCPAHLYATSISPPAAEQIISAIK-----------VILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE 391 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~-----------~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 391 (489)
+++++.+..... ...+.+++.++++..+|+ +.. +.++++++++++.+++.+.|+++ |+.
T Consensus 337 ~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~l~~~L~~~~g~~ 407 (500)
T 3tcm_A 337 APVREQIYKIAS---VNLCSNITGQILASLVMNPPKASDESYASYKA------EKDGILASLARRAKALEHAFNKLEGIT 407 (500)
T ss_dssp TTHHHHHHHHHH---TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHH------HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHh---cccCCCHHHHHHHHHHhcCccccchhHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 889888876442 122366666666666654 221 45778889999999999999998 888
Q ss_pred eeCCCCCCeEEEEeCCCCc------------HHHHH-HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHH
Q 046230 392 VLGDNDSPVMPIMLYNPAK------------IPAFS-RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 392 v~~~~~~~~~~~~~~~~~~------------~~~~~-~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
+..+.++.++++.+..+.. ...++ +.|.++||.+++...+..+.+.+++|++++ +++++++++++
T Consensus 408 ~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~ 485 (500)
T 3tcm_A 408 CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVIS 485 (500)
T ss_dssp CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHH
T ss_pred EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHH
Confidence 8777767665544443322 12233 445556999998655554456789999996 89999999999
Q ss_pred HHHHHHHHhCCcc
Q 046230 459 VISRVGDLVGIKY 471 (489)
Q Consensus 459 ~l~~~~~~~~~~~ 471 (489)
+|.++++++..++
T Consensus 486 ~l~~~~~~~~~~~ 498 (500)
T 3tcm_A 486 RFTVFHEAFMSEY 498 (500)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998876554
No 125
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=5.4e-28 Score=240.75 Aligned_cols=309 Identities=12% Similarity=0.107 Sum_probs=228.4
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCC
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVF-GMGYVTNSAILPVLMRKGSLIISDSLN 194 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~ 194 (489)
+|.+.+++.+++.. . ......+...++++.+++++|.+ +.+++ ++|++++..++.++.++|+.|++..+.
T Consensus 13 ~~~v~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 84 (352)
T 1iug_A 13 HPKALEALARPQLH----H----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYG 84 (352)
T ss_dssp CHHHHHHHHSCCCC----T----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred CHHHHHHhccCCCC----c----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCC
Confidence 46666666555431 1 11123456689999999999976 45555 577788888888888999999999999
Q ss_pred chHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHH
Q 046230 195 HNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICK 267 (489)
Q Consensus 195 h~~~~--~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~ 267 (489)
|+++. ..++..|++++.++.+ |+++|++ . ++.+|+++++++++|.+.++++|.++|+
T Consensus 85 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~-------------~~~~v~~~~~~nptG~~~~l~~i~~l~~ 148 (352)
T 1iug_A 85 KFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---E-------------GYAGLLLVHSETSTGALADLPALARAFK 148 (352)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---S-------------SCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred chhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---c-------------CCcEEEEEEecCCcceecCHHHHHHHHH
Confidence 98865 3335578998888764 4555544 1 2336677889999999999999999999
Q ss_pred Hc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHH---------HH---
Q 046230 268 KY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQY---------LK--- 331 (489)
Q Consensus 268 ~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~---------l~--- 331 (489)
+| |+++|+||+|++|... +++...++|++++|++|++ |+.| |+++.++++++. +.
T Consensus 149 ~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T 1iug_A 149 EKNPEGLVGADMVTSLLVGE---------VALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLAREL 219 (352)
T ss_dssp HHCTTCEEEEECTTTBTTBC---------CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHH
T ss_pred hhCCCCEEEEECCccccCcc---------eeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHH
Confidence 99 9999999999854321 1111113489999999965 5557 999999887654 21
Q ss_pred -hhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC-CCCeEEEEeCCCC
Q 046230 332 -YTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN-DSPVMPIMLYNPA 409 (489)
Q Consensus 332 -~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~-~~~~~~~~~~~~~ 409 (489)
...... ...+.++..++++.++++.+.. +.++.+++++++.+++.+.|+++|+.+..+. .+.++++.+....
T Consensus 220 ~~~~~~~-~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T 1iug_A 220 KAQKEGE-SAWTPAINLVLAVAAVLEEVLP-----RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGV 293 (352)
T ss_dssp HHHTTTC-CSSCCCHHHHHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTC
T ss_pred hhcccCC-CCCCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCC
Confidence 111111 2334788888888889987632 3578889999999999999999988876653 5667777776445
Q ss_pred cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
...++.+.|.++||.+.+... +...+++||+++..+|++|+++++++|+++++++
T Consensus 294 ~~~~~~~~l~~~gi~v~~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 294 PYARVKEAFAQRGAVIAGGQG---PLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp CHHHHHHHHHTTTEECEECCG---GGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEEeCCC---ccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 678899999999999986431 2345789999988889999999999999998776
No 126
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=8.3e-28 Score=245.30 Aligned_cols=327 Identities=15% Similarity=0.150 Sum_probs=236.9
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccH-HHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGY-VTNS 175 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~ 175 (489)
+..|+|+++. + +.++.+.+++.+++.+ ++......+...+..+...++++.+++++|.+ +.+++++|+ +++.
T Consensus 28 ~~~yld~~~~---~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~ 102 (416)
T 1qz9_A 28 GVIYLDGNSL---G--ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLF 102 (416)
T ss_dssp TCEECCTTTS---C--CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHH
T ss_pred CeEeecCCCc---C--CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHH
Confidence 5678887533 2 3468899999999975 33221111111234567789999999999975 456565554 4455
Q ss_pred HhHhhhc------CCCC-EEEEcCCCchHHHHHHH----hc--CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 176 AILPVLM------RKGS-LIISDSLNHNSIVNGAR----GS--GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 176 ~~~~al~------~~g~-~Vl~~~~~h~~~~~~~~----~~--g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
.++.++. .+|+ +|+++.++|+++...+. .. |++++.++. +++|++.+.+ ++.
T Consensus 103 ~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~l~~~i~~-------------~~~ 167 (416)
T 1qz9_A 103 KVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--PEELPQAIDQ-------------DTA 167 (416)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--GGGHHHHCST-------------TEE
T ss_pred HHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--HHHHHHHhCC-------------Cce
Confidence 6677665 7787 57888889998665432 23 889888887 7888877643 456
Q ss_pred EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcc--eE
Q 046230 243 MVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG--GY 319 (489)
Q Consensus 243 ~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G--G~ 319 (489)
+|+++++++++|.+.++++|.++|++||+++|+||+|++|... ... ..+ . +|+++.|++|++ ++.| |+
T Consensus 168 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~-~~~--~---~d~~~~s~~K~l~~g~~~~g~ 238 (416)
T 1qz9_A 168 VVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVP---VDL-HQA--G---ADYAIGCTYKYLNGGPGSQAF 238 (416)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---CCH-HHH--T---CSEEEECSSSTTCCCTTCCCE
T ss_pred EEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcC---CCh-hhc--C---CCEEEecCcccCCCCCCCeEE
Confidence 7888999999999999999999999999999999999854321 111 111 2 389999999997 3334 89
Q ss_pred EEeCHHHHHHHHhhCCCc--------------------cc-ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 320 IAGSKELIQYLKYTCPAH--------------------LY-ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 320 i~~~~~~~~~l~~~~~~~--------------------~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
++.++++++.+.....++ .+ ..+.++..++++.++|+.+. ....++.+++++++.
T Consensus 239 l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~ 314 (416)
T 1qz9_A 239 VWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA----QTDMASLRRKSLALT 314 (416)
T ss_dssp EEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT----TSCHHHHHHHHHHHH
T ss_pred EEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHH
Confidence 999998877665432211 11 12467888888888998873 124678899999999
Q ss_pred HHHHHHHHhC----CCeeeCCC----CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeec-CCCC
Q 046230 379 NFFRSELQKM----GFEVLGDN----DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICIS-ASHT 449 (489)
Q Consensus 379 ~~l~~~L~~~----g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~-~~~t 449 (489)
+++.+.|+++ |+.+..+. .++++++.+.. ..++.+.|.++||.+.. ...+.+||+++ ..+|
T Consensus 315 ~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~gi~~~~-------~~~~~lRis~~~~~~t 384 (416)
T 1qz9_A 315 DLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---GYAVIQALIDRGVIGDY-------REPRIMRFGFTPLYTT 384 (416)
T ss_dssp HHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---HHHHHHHHHTTTEECEE-------ETTTEEEEECCTTTCC
T ss_pred HHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---HHHHHHHHHhCCcEecc-------CCCCeEEEeCcccCCC
Confidence 9999999987 88876653 35666666542 67899999999998752 23578999997 4889
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 046230 450 KEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 450 ~edid~~l~~l~~~~~~~~ 468 (489)
++|+++++++|++++++..
T Consensus 385 ~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 385 FTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999999988754
No 127
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=1.4e-27 Score=241.63 Aligned_cols=298 Identities=19% Similarity=0.184 Sum_probs=223.3
Q ss_pred chhHHHHHHHHHHHhCCCC--EEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHH--HHHHhcCCeEEEecC-----
Q 046230 145 LMVHNELEECVARFVGKPA--AIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIV--NGARGSGATIRVFQH----- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~--~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~--~~~~~~g~~~~~~~~----- 214 (489)
.+...++++.+++++|.+. .+++ ++|++++..++.++.++|+.|++..+.|.+.. ..++..|++++.++.
T Consensus 51 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 130 (393)
T 2huf_A 51 LKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQS 130 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCC
Confidence 4567899999999999753 5655 66778888888888899999999999988742 233557888888874
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccc
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
.|+++|++.+++. +..+|++.++++++|.+.++++|.++|++||+++|+||+|++|.. .
T Consensus 131 ~d~~~l~~~i~~~------------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~---------~ 189 (393)
T 2huf_A 131 LSLDEIRDALLIH------------KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGA---------P 189 (393)
T ss_dssp CCHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB---------C
T ss_pred CCHHHHHHHHhcc------------CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC---------C
Confidence 4889999988752 233566678899999999999999999999999999999985432 1
Q ss_pred cCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHhhC---CCcc-----------------c-ccCCCHHHHHHH
Q 046230 295 LEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKYTC---PAHL-----------------Y-ATSISPPAAEQI 351 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~~~---~~~~-----------------~-~~~~~p~~~aa~ 351 (489)
.++...++|+++.|++|++ |++| |++++++++++.+.... .++. + ..+.+...++++
T Consensus 190 ~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 269 (393)
T 2huf_A 190 MFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGL 269 (393)
T ss_dssp CCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHH
T ss_pred cchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHH
Confidence 1222223599999999986 5567 99999999999887541 1211 0 123566677777
Q ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---CCCeEEEEeCCCCcHHHHHHHHhhC-CceEEe
Q 046230 352 ISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN---DSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVT 427 (489)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~ 427 (489)
.++|+.+... ..++.+++++++.+++.+.|+++|+.+..+. .+.++++.+.......++.+.|+++ ||.+.+
T Consensus 270 ~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~ 345 (393)
T 2huf_A 270 REAIAMACEE----GLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISG 345 (393)
T ss_dssp HHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEec
Confidence 7788876310 2567889999999999999999988776543 2346667665445677899999876 999885
Q ss_pred ecCCCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 428 VAFPATPLLLARARICI-SASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
... +...+++||++ +...+++++++++++|++++++++.+
T Consensus 346 g~~---~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 346 GLG---PTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPD 386 (393)
T ss_dssp CCG---GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC-
T ss_pred Ccc---cccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 321 12457899999 54568999999999999999887654
No 128
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.96 E-value=4e-28 Score=246.82 Aligned_cols=336 Identities=20% Similarity=0.194 Sum_probs=238.0
Q ss_pred ceeEeccc-ccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHH----HHHHHHhCCCCE-EEeCccHH
Q 046230 100 NRCLNLGS-YNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELE----ECVARFVGKPAA-IVFGMGYV 172 (489)
Q Consensus 100 ~~~id~~s-~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i~~~sG~~ 172 (489)
+++||+.+ .+++ +|.+.+++.+++.+ +....+.+....|.. ....++ +.+++++|.+.. +++++|++
T Consensus 23 ~~~i~~~~~~~~~-----~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~-~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~ 96 (407)
T 2dkj_A 23 REGLELIASENFV-----SKQVREAVGSVLTNKYAEGYPGARYYGGCE-VIDRVESLAIERAKALFGAAWANVQPHSGSQ 96 (407)
T ss_dssp HTSEECCTTCCCC-----CHHHHHHHTSGGGGCCCCEETTEESSSCCH-HHHHHHHHHHHHHHHHHTCSEEECCCSSHHH
T ss_pred hcceeeccCCCCC-----CHHHHHHHHhhhhcCcccCCCcccccCCch-HHHHHHHHHHHHHHHHhCCCcceEEecchHH
Confidence 56888853 3544 58899999998865 333332222222332 222333 589999998765 66799999
Q ss_pred HHHHhHhhhcCCCCEEEEcCCCchHHH---HHHHhcCC--eEEEec------CCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 173 TNSAILPVLMRKGSLIISDSLNHNSIV---NGARGSGA--TIRVFQ------HNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 173 a~~~~~~al~~~g~~Vl~~~~~h~~~~---~~~~~~g~--~~~~~~------~~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
++..++.++.++|+.|+++.++|+++. ..++..|. ..+.++ ..|+++|++.+++. +.+
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----------~~~ 165 (407)
T 2dkj_A 97 ANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH-----------RPK 165 (407)
T ss_dssp HHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH-----------CCS
T ss_pred HHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc-----------CCe
Confidence 888888888899999999999998773 33333344 444453 13789999988752 244
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-CcceEE
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCGGYI 320 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~GG~i 320 (489)
++++.++.+ |...++++|.++|++||++||+||+|+.|.. ..|... ...+ ..|++++|+||+++ +.||++
T Consensus 166 ~v~~~~p~~---~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-~~~~~~-~~~~----~~di~~~s~sK~l~g~~~G~~ 236 (407)
T 2dkj_A 166 VIVAGASAY---PRFWDFKAFREIADEVGAYLVVDMAHFAGLV-AAGLHP-NPLP----YAHVVTSTTHKTLRGPRGGLI 236 (407)
T ss_dssp EEEECCSSC---CSCCCHHHHHHHHHHHTCEEEEECTTTHHHH-HTTCSC-CCTT----TCSEEEEESSGGGCCCSCEEE
T ss_pred EEEEecccc---CCCCCHHHHHHHHHHcCCEEEEEcccccccc-ccCccC-Cccc----cccEEEEeccccCCCCCceEE
Confidence 444434544 3678899999999999999999999995332 233211 1111 24999999999995 445999
Q ss_pred EeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CCCC
Q 046230 321 AGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLG-DNDS 398 (489)
Q Consensus 321 ~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~-~~~~ 398 (489)
+++ +++++.+......+. ..+.++..++++.++|+.+.. ...++.+++++++.+++.+.|+++|+++.. +..+
T Consensus 237 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 311 (407)
T 2dkj_A 237 LSNDPELGKRIDKLIFPGI-QGGPLEHVIAGKAVAFFEALQ----PEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDN 311 (407)
T ss_dssp EESCHHHHHHHHHHHTTTT-CSSCCHHHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSS
T ss_pred EECCHHHHHHHHhhhcccc-cCCCcHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCc
Confidence 999 899988876543332 234677777778888887521 255788999999999999999999988865 3467
Q ss_pred CeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCC---cCCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 046230 399 PVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPA---TPLLLARARICISA----SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 399 ~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~---~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~ 466 (489)
+++++.+.. .....++.+.|.++||.+.+...|. .+...+.+|++++. .+|++|+++++++|++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 312 HLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp SEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 787877753 2356789999999999999754321 12235789999875 38999999999999999876
No 129
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=8.8e-28 Score=239.72 Aligned_cols=331 Identities=16% Similarity=0.131 Sum_probs=231.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CE-EEeCccHHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AA-IVFGMGYVTNSA 176 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~-i~~~sG~~a~~~ 176 (489)
...+++|++ ++.+ +.+|.+.+++.+++.+|+.+. |..++..++++.+++++|.+ +. ++.++|++++..
T Consensus 12 ~p~~i~l~~-~~~~--~~~~~v~~a~~~~~~~~~~~~-------g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~ 81 (359)
T 1svv_A 12 KPKPYSFVN-DYSV--GMHPKILDLMARDNMTQHAGY-------GQDSHCAKAARLIGELLERPDADVHFISGGTQTNLI 81 (359)
T ss_dssp ---CEECSC-SCSS--CCCHHHHHHHHHHTTCCCCST-------TCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHH
T ss_pred CCeeEEecC-CCcC--CCCHHHHHHHHHHHhhccccc-------cccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHH
Confidence 345888876 4455 346889999999887654332 55788899999999999864 34 445777888888
Q ss_pred hHhhhcCCCCEEEEcCCCchHHHH--HHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 177 ILPVLMRKGSLIISDSLNHNSIVN--GARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 177 ~~~al~~~g~~Vl~~~~~h~~~~~--~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
++.++.++|+.|+++.+.|+++.. .++..|++++.++.+ |+++|++.+++... .++ .+..+|+++++
T Consensus 82 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~-----~~~-~~~~~v~~~~~- 154 (359)
T 1svv_A 82 ACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRS-----EHM-VIPKLVYISNT- 154 (359)
T ss_dssp HHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCS-----TTS-CEEEEEEEESS-
T ss_pred HHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHh-----ccC-CCceEEEEEcC-
Confidence 999999999999999999999877 377889999999876 58999998876200 001 13456666666
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHH
Q 046230 251 SMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKEL 326 (489)
Q Consensus 251 s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~ 326 (489)
+++|.+.+ +++|+++|++||++||+||+|..-.+|..+... ...++. ...|+++.+.+|..++.| |+++.++++
T Consensus 155 ~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~-~~~d~~~~s~~K~g~~~~~g~l~~~~~~ 232 (359)
T 1svv_A 155 TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIA-RLTDMFYIGATKAGGMFGEALIILNDAL 232 (359)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHH-HHCSEEEEECTTTTCSSCEEEEECSGGG
T ss_pred CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhh-hcCCEEEEecccCCCCCceEEEEEcccH
Confidence 67999988 999999999999999999999411123332211 111110 123888889999876667 899999988
Q ss_pred HHHHHhhC--CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEE
Q 046230 327 IQYLKYTC--PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM 404 (489)
Q Consensus 327 ~~~l~~~~--~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~ 404 (489)
++.+.... .+..+. .++...+++.+ .+. ....++.+++++++.+++.+.|+..|+.+..+.+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~l~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 303 (359)
T 1svv_A 233 KPNARHLIKQRGALMA--KGWLLGIQFEV---LMK----DNLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPI 303 (359)
T ss_dssp CTTHHHHHHHTTCCCT--TTHHHHHHHHH---HTS----TTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBE
T ss_pred HHHHHHHHhcCCcccc--cchhhHHHHHH---HHh----hhhHHHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEE
Confidence 77665431 222222 23333333322 231 12456788999999999999996558888766667665554
Q ss_pred eCCCCcHHHHHHHHhhC-CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 405 LYNPAKIPAFSRECLRQ-NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+. .++.++|+++ ||.+... .+.+.+++||+++..+|++|+++++++|++++++
T Consensus 304 ~~-----~~~~~~l~~~~gi~v~~~----~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 304 LE-----NTMIAELNNDFDMYTVEP----LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EE-----HHHHHHHTTTEECEEEEE----ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred cC-----HHHHHHHHHhcCEEEEec----ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 42 4789999999 9998421 1234578999998889999999999999987754
No 130
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=2e-27 Score=239.03 Aligned_cols=294 Identities=13% Similarity=0.052 Sum_probs=216.1
Q ss_pred chhHHHHHHHHHHHhCCC---CEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHH--HHHHhcCCeEEEecCC---
Q 046230 145 LMVHNELEECVARFVGKP---AAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIV--NGARGSGATIRVFQHN--- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~--~~~~~~g~~~~~~~~~--- 215 (489)
.+...++++.+++++|.+ +.+++ ++|++++..++.++.++||.|++..+.|.+.. ..+...|++++.++.+
T Consensus 51 ~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 130 (376)
T 3f0h_A 51 SSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGK 130 (376)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence 466788999999999875 34554 55588888889999999998888876554432 3456668888877653
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccc
Q 046230 216 --TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293 (489)
Q Consensus 216 --d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~ 293 (489)
|+++|++.+.. ++.+|++.++++++|.+.|+++|+++|++||+++|+||+|+.+.. .- ..+
T Consensus 131 ~~d~~~l~~~~~~-------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~--~~--~~~ 193 (376)
T 3f0h_A 131 KLTKEKLYEYDNQ-------------NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD--PF--NMN 193 (376)
T ss_dssp CCCHHHHHTTTTS-------------CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS--CC--CHH
T ss_pred CCCHHHHHHhhcc-------------CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCc--cc--ccc
Confidence 67777765422 344677778889999999999999999999999999999994432 11 111
Q ss_pred ccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCCCcc---------------cccCCCHHHHHHHHHHHH
Q 046230 294 LLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCPAHL---------------YATSISPPAAEQIISAIK 356 (489)
Q Consensus 294 ~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~~~~---------------~~~~~~p~~~aa~~a~L~ 356 (489)
.+ ++|+++.|++|+++ ++| |+++.++++++.+........ ...+.+...++++.++++
T Consensus 194 ~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 268 (376)
T 3f0h_A 194 EC-----GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLK 268 (376)
T ss_dssp HH-----TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred cc-----CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHH
Confidence 12 24899999999998 556 899999999988875322110 112355556677778888
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC-CceEEeecCCCcCC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPATPL 435 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~ 435 (489)
.+.. .+..++.+++.+++.+++.+.|+++++.+..+..++.+..+........++.+.|.++ ||.+.+.. .+.
T Consensus 269 ~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~---~~~ 342 (376)
T 3f0h_A 269 EIKK---HGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNG---GEM 342 (376)
T ss_dssp HHHH---TTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECC---GGG
T ss_pred HHHH---hcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCc---ccc
Confidence 7632 1125778888999999999999998887765544444444444455678899999998 99998642 123
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 436 LLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
..+++||+++..+|++|+++++++|++++++
T Consensus 343 ~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 343 KDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp TTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 4578999999889999999999999998764
No 131
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.96 E-value=5e-28 Score=240.83 Aligned_cols=329 Identities=19% Similarity=0.191 Sum_probs=225.8
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP 179 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~ 179 (489)
.++|||+++.... + ++.+.+++.+.+ ... ..++..+...+|++++|+++|.+..+++++|++++..++.
T Consensus 3 ~~~i~~~~~~~~~-p--~~~~~~a~~~~~----~~~----~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~ 71 (347)
T 1jg8_A 3 HMMIDLRSDTVTK-P--TEEMRKAMAQAE----VGD----DVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIM 71 (347)
T ss_dssp --CEECSCGGGCC-C--CHHHHHHHHTCC----CCC----GGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred ceEEEeccccCCC-C--CHHHHHHHhcCC----CCC----cccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHH
Confidence 4678997664432 2 245555554321 111 1223455678999999999999988999999999988888
Q ss_pred hhcCCCCEEEEcCCCchHHHH---HHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCC
Q 046230 180 VLMRKGSLIISDSLNHNSIVN---GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYS 251 (489)
Q Consensus 180 al~~~g~~Vl~~~~~h~~~~~---~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s 251 (489)
++.++||.|+++.++|.+... .+...|++++.+ .+ |+++|++++++... + ..++.+|+++++++
T Consensus 72 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~------~-~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 72 AHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNI------H-FPRTSLIAIENTHN 143 (347)
T ss_dssp HHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCT------T-SCCEEEEEEESSBT
T ss_pred HhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccc------c-ccCceEEEEecccc
Confidence 888999999999999987653 456779988887 43 77888877642000 0 01456788899999
Q ss_pred CC-CCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEeCHHH
Q 046230 252 ME-GELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKEL 326 (489)
Q Consensus 252 ~~-G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~~~~~ 326 (489)
++ |.+.+ +++|+++|++||+++|+||+|..+.++..+...... . ...|.++.|+||+++++ |+++++++++
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~-~---~~~d~~~~s~sK~l~~~~G~~~~~~~~~ 219 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEY-A---GYADSVMFCLSKGLCAPVGSVVVGDRDF 219 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHH-H---HTCSEEEEESSSTTCCSSCEEEEECHHH
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHh-c---ccccEEEEecccccCCCceEEEEcCHHH
Confidence 98 98866 579999999999999999998643322222211111 1 12366677999999853 3467889888
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee-CCCCCCeEEEEe
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL-GDNDSPVMPIML 405 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~-~~~~~~~~~~~~ 405 (489)
++.+......+..+...++..++++..+|+... +.+++..++.+++++.|+++|+.+. .+..+.++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 290 (347)
T 1jg8_A 220 IERARKARKMLGGGMRQAGVLAAAGIIALTKMV---------DRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRT 290 (347)
T ss_dssp HHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS---------TTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEEC
T ss_pred HHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEc
Confidence 877654322221122345666666677776431 1223344567888888888777652 344567777766
Q ss_pred CC-CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 406 YN-PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 406 ~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.. .....++.++|.++||.+.+.+ .+++|++++..+|++|+++++++|+++++++
T Consensus 291 ~~~~~~~~~~~~~l~~~gi~v~~~~-------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 291 DNLKVNAHGFIEALRNSGVLANAVS-------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp TTSSSCHHHHHHHHHHHTEECEEEE-------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHCCCEEecCC-------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 53 3457889999999999998532 3689999988899999999999999987653
No 132
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=1.1e-27 Score=243.53 Aligned_cols=312 Identities=15% Similarity=0.140 Sum_probs=223.1
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchH
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNS 197 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~ 197 (489)
+.+.+++.+++..+...........+..+...++++++++++|.++.+++++|++++..++.++.++|+.|+++.+.|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~ 115 (398)
T 2rfv_A 36 TFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGC 115 (398)
T ss_dssp BCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHH
T ss_pred ccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCccc
Confidence 44555555555532211111111123467789999999999999989999999999988999989999999999999999
Q ss_pred HHHHH----HhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEE
Q 046230 198 IVNGA----RGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYI 273 (489)
Q Consensus 198 ~~~~~----~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~l 273 (489)
+...+ ...|.+++.++.+|+++|++.+++ ++.+|+++++++++|.+.++++|.++|++||+++
T Consensus 116 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 182 (398)
T 2rfv_A 116 THAFLSHSMPKFGINVRFVDAAKPEEIRAAMRP-------------ETKVVYIETPANPTLSLVDIETVAGIAHQQGALL 182 (398)
T ss_dssp HHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCT-------------TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCC-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEE
Confidence 88776 778999999999999999887753 4567778999999999999999999999999999
Q ss_pred EEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc----ceEEEeCHHHHH-HHHhhCCCccc-ccCCCHHH
Q 046230 274 YLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC----GGYIAGSKELIQ-YLKYTCPAHLY-ATSISPPA 347 (489)
Q Consensus 274 i~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~----GG~i~~~~~~~~-~l~~~~~~~~~-~~~~~p~~ 347 (489)
|+||+|+.+.++. . ... ++|+++.|++|+|+++ ||++++++++++ .++..... + +.+.+++.
T Consensus 183 i~De~~~~~~~~~---~----~~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 250 (398)
T 2rfv_A 183 VVDNTFMSPYCQQ---P----LQL---GADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKD--ITGGCMSPFN 250 (398)
T ss_dssp EEECTTTCTTTCC---G----GGG---TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHH--TTCCCCCHHH
T ss_pred EEECCCcccccCC---c----hhh---CCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHh--CCCCCCCHHH
Confidence 9999999554421 1 122 2389999999999755 399999998887 55543222 2 33588999
Q ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC---------------CeeeC---CCCCCeEEEEeCCC-
Q 046230 348 AEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG---------------FEVLG---DNDSPVMPIMLYNP- 408 (489)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------------~~v~~---~~~~~~~~~~~~~~- 408 (489)
++++.++|+.+ +.+.+++.++.+.+.+.|++.+ +.+.. ...++++++.+...
T Consensus 251 ~~~~~~~l~~~---------~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 321 (398)
T 2rfv_A 251 AWLTLRGVKTL---------GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 321 (398)
T ss_dssp HHHHHHHHTTH---------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred HHHHHhhhhhH---------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH
Confidence 99888888743 4556677778888888887753 11111 12467777766532
Q ss_pred CcHHHHHHHHhhCCceEEeecC------CCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 409 AKIPAFSRECLRQNVAVVTVAF------PAT--------------PLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~------p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
.....+.+.+...|+.+.+... |.. ....+.+||+++..++++++++++++|+++
T Consensus 322 ~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 322 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1233444444444665543211 100 112589999999999999999998888754
No 133
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=1.6e-26 Score=234.15 Aligned_cols=298 Identities=15% Similarity=0.153 Sum_probs=224.3
Q ss_pred hhHHHHHHHHHHHhCCC-C-EEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHH--HHHHhcCCeEEEecC-----C
Q 046230 146 MVHNELEECVARFVGKP-A-AIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIV--NGARGSGATIRVFQH-----N 215 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~-~-~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~--~~~~~~g~~~~~~~~-----~ 215 (489)
....++++.++++++.+ + .+++ ++|++++..++.++..+|+.|++..+.|.++. ..++..|++++.++. .
T Consensus 51 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 130 (396)
T 2ch1_A 51 RTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPF 130 (396)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCC
Confidence 45789999999999975 3 5666 55677788888888999999999999999874 366778999988874 4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL 295 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~ 295 (489)
|+++|++.+++. +..+|++.++++++|.+.++++|.++|++||+++|+||+|++|.. ..
T Consensus 131 d~~~l~~~l~~~------------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~---------~~ 189 (396)
T 2ch1_A 131 SLETLARAIELH------------QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGV---------PF 189 (396)
T ss_dssp CHHHHHHHHHHH------------CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB---------CC
T ss_pred CHHHHHHHHHhC------------CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCC---------cc
Confidence 889999988752 234566678889999999999999999999999999999985422 11
Q ss_pred CCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhC---CC------------------cccccCCCHHHHHHHH
Q 046230 296 EVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTC---PA------------------HLYATSISPPAAEQII 352 (489)
Q Consensus 296 ~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~---~~------------------~~~~~~~~p~~~aa~~ 352 (489)
++...++|+++.|++|+++ +.| |+++.++++++.+.... .. .....+.+...++++.
T Consensus 190 ~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 269 (396)
T 2ch1_A 190 YMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALR 269 (396)
T ss_dssp CTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHH
T ss_pred chhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHH
Confidence 2222234899899999875 445 89999999888875421 00 0011235677778888
Q ss_pred HHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC----CCeEEEEeCCCCcHHHHHHHHhhC-CceEEe
Q 046230 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND----SPVMPIMLYNPAKIPAFSRECLRQ-NVAVVT 427 (489)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~ 427 (489)
++|+.+.. ...++.+++++++++++.+.|+++|+.+..+.+ +.++++.+.......++.++|+++ ||.+.+
T Consensus 270 ~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~ 345 (396)
T 2ch1_A 270 EALAQIAE----EGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQG 345 (396)
T ss_dssp HHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBC
T ss_pred HHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEec
Confidence 88887621 145678899999999999999998888765543 236666665445678899999886 999875
Q ss_pred ecCCCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 046230 428 VAFPATPLLLARARICI-SASHTKEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (489)
... +...+++|+++ +..+|++|+++++++|+++++++...+
T Consensus 346 g~~---~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~~ 387 (396)
T 2ch1_A 346 GLG---PTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDY 387 (396)
T ss_dssp CCG---GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTC
T ss_pred Ccc---ccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCccE
Confidence 221 23457899999 557799999999999999999876443
No 134
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=1.2e-27 Score=244.10 Aligned_cols=333 Identities=17% Similarity=0.219 Sum_probs=217.2
Q ss_pred cccccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCc--c-hhHHHHHHHHHHHhCCCCE-EEeCccHHHHHHhHh
Q 046230 105 LGSYNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGT--L-MVHNELEECVARFVGKPAA-IVFGMGYVTNSAILP 179 (489)
Q Consensus 105 ~~s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~--~-~~~~~l~~~la~~~g~~~~-i~~~sG~~a~~~~~~ 179 (489)
+++.|+ .||.+.+++.+++. .++.+..++....+. . ......++.++++++.+.. +++++|++++..++.
T Consensus 36 ~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~ 110 (420)
T 3gbx_A 36 IASENY-----TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYT 110 (420)
T ss_dssp CTTCCC-----CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHH
T ss_pred eccCCC-----CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHH
Confidence 355555 26899999999884 443333332222221 1 2233355788999998755 557999999988889
Q ss_pred hhcCCCCEEEEcCCCchHHH-HHH--HhcC--CeEEEecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 180 VLMRKGSLIISDSLNHNSIV-NGA--RGSG--ATIRVFQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 180 al~~~g~~Vl~~~~~h~~~~-~~~--~~~g--~~~~~~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
++.++||.|+++.++|+++. .+. ...| ...+.++. .|+++|++++++. ..+++++.++.
T Consensus 111 ~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~~~v~~~~~~ 179 (420)
T 3gbx_A 111 ALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH-----------KPKMIIGGFSA 179 (420)
T ss_dssp HHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH-----------CCSEEEECCTT
T ss_pred HhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc-----------CCeEEEEecCc
Confidence 99999999999999998743 222 2223 23333322 4899999999763 23444433443
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-CCcceEEEeCH---H
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCGGYIAGSK---E 325 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~GG~i~~~~---~ 325 (489)
+ |...++++|+++|++||++||+||+|+.|.+ ..|.... .. ..+||+++|+||++ |+.||++++++ +
T Consensus 180 ~---~~~~~l~~l~~l~~~~~~~li~De~~~~~~~-~~~~~~~-~~----~~~di~~~s~sK~~~g~~gg~~~~~~~~~~ 250 (420)
T 3gbx_A 180 Y---SGVVDWAKMREIADSIGAYLFVDMAHVAGLI-AAGVYPN-PV----PHAHVVTTTTHKTLAGPRGGLILAKGGDEE 250 (420)
T ss_dssp C---CSCCCHHHHHHHHHHTTCEEEEECTTTHHHH-HTTSSCC-ST----TTSSEEEEESSGGGCSCSCEEEEESSCCHH
T ss_pred c---CCccCHHHHHHHHHHcCCEEEEECCcchhce-ecccCCc-cc----ccCCEEEeecccCCCCCCceEEEEcCCcHH
Confidence 3 4578899999999999999999999875543 2232111 11 12589999999999 55579999987 8
Q ss_pred HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCeEEEE
Q 046230 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-NDSPVMPIM 404 (489)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~~~~~~~~ 404 (489)
+++.+.........++ .+...++++..++..+. ..+.+++++++.++.+++++.|++.|+.+... ..++++++.
T Consensus 251 ~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 325 (420)
T 3gbx_A 251 LYKKLNSAVFPSAQGG-PLMHVIAGKAVALKEAM----EPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLD 325 (420)
T ss_dssp HHHHHHHHHC----CC-CCHHHHHHHHHHHHHTT----SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEE
T ss_pred HHHHhhhhcCCCCCCC-cchhHHHHHHHHHHHHH----hHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEE
Confidence 8887765443332222 33333444343443321 22457889999999999999999999988653 457777777
Q ss_pred eCC-CCcHHHHHHHHhhCCceEEeecCCC---cCCCCCeEEEeecCC----CCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYN-PAKIPAFSRECLRQNVAVVTVAFPA---TPLLLARARICISAS----HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~---~~~~~~~iRi~~~~~----~t~edid~~l~~l~~~~~~~ 467 (489)
+.. ......+.+.|.++||.+.+..+|. .+.+.+.+||+++.. .+++++++++++|++++++.
T Consensus 326 ~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 326 LVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 654 3356778888888999999854442 233456699998754 56899999999999998764
No 135
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1e-26 Score=237.69 Aligned_cols=337 Identities=18% Similarity=0.191 Sum_probs=219.0
Q ss_pred eeEecc-cccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCc--chhHHHHH-HHHHHHhCCCCEEE-eCccHHHH
Q 046230 101 RCLNLG-SYNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGT--LMVHNELE-ECVARFVGKPAAIV-FGMGYVTN 174 (489)
Q Consensus 101 ~~id~~-s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~--~~~~~~l~-~~la~~~g~~~~i~-~~sG~~a~ 174 (489)
+.+++. +.|++ ||.+.+++.+++. .|+.+..+.+...+. .+...++. +.++++++.+...+ +++|++++
T Consensus 33 ~~i~l~~~~~~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~ 107 (425)
T 3ecd_A 33 SQVELIASENIV-----SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQAN 107 (425)
T ss_dssp HSEECCTTCCCC-----CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred cceeeecccCCC-----CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHH
Confidence 456664 34444 6899999999884 454443333322222 22445554 77889999887644 79999999
Q ss_pred HHhHhhhcCCCCEEEEcCCCchH-HHHHHH--hcCC--eEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 175 SAILPVLMRKGSLIISDSLNHNS-IVNGAR--GSGA--TIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~-~~~~~~--~~g~--~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
..++.++.++||.|+++.++|++ ...+.. ..|. .++.++.+ |+++|++++.+. +.++
T Consensus 108 ~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~~~- 175 (425)
T 3ecd_A 108 GAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH-----------KPSL- 175 (425)
T ss_dssp HHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHH-----------CCSE-
T ss_pred HHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc-----------CCcE-
Confidence 88899899999999999999988 323332 3444 44455544 899999999752 2444
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC-cceEEEe
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-CGGYIAG 322 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-~GG~i~~ 322 (489)
|++++..+ |...++++|.++|++||++||+||+|+.|.+ ..|.... .. ..+||+++|+||++++ .||++++
T Consensus 176 v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~-~~~~~~~-~~----~~~di~~~s~sK~l~g~~~g~~~~ 247 (425)
T 3ecd_A 176 IIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVI-AAGRHAN-PV----EHAHVVTSTTHKTLRGPRGGFVLT 247 (425)
T ss_dssp EEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHH-HTTSSCC-GG----GTCSEEEEESSGGGCCCSCEEEEE
T ss_pred EEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhh-hcccccC-ch----hcCcEEEecCCcccCCCCcEEEEe
Confidence 44443333 5678999999999999999999999875543 2332211 11 1248999999999953 3699998
Q ss_pred C-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCe
Q 046230 323 S-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-NDSPV 400 (489)
Q Consensus 323 ~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~~~~ 400 (489)
+ +++.+.+.........+ +.++..++++.+++..+. ....++.++++.++.+++++.|++.|+.+..+ ..+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~a~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 322 (425)
T 3ecd_A 248 NDEEIAKKINSAVFPGLQG-GPLMHVIAGKAVAFGEAL----TDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHL 322 (425)
T ss_dssp SCHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSE
T ss_pred CCHHHHHHHHhhhCccccC-CccHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceE
Confidence 8 57777776543332222 234444444444443331 12456888999999999999999999988653 45777
Q ss_pred EEEEeCC-CCcHHHHHHHHhhCCceEEeecCCC---cCCCCCeEEEeec----CCCCHHHHHHHHHHHHHHHHHh
Q 046230 401 MPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPA---TPLLLARARICIS----ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 401 ~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~---~~~~~~~iRi~~~----~~~t~edid~~l~~l~~~~~~~ 467 (489)
+++.+.. ......+.+.|.++||.+.+..+|. .+...+++|++++ ..++++++++++++|+++++..
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 323 LLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 7777653 3356778888988999999654443 2334578999944 4456999999999999999876
No 136
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=4.3e-28 Score=246.01 Aligned_cols=342 Identities=16% Similarity=0.156 Sum_probs=218.1
Q ss_pred cccccccCccceeEecccccccCCCCCCccchHHHHHHHHHh-CCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEE-E
Q 046230 90 NKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKY-SPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAI-V 166 (489)
Q Consensus 90 ~~~~~~~~~g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i-~ 166 (489)
.+.++...++.-|+|+.++. ..+|.+.+++.+++.+. +..........+..+...++++.++++++.+ +.+ +
T Consensus 11 ~~~~~~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~ 85 (400)
T 3vax_A 11 SSGLVPRGSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIF 85 (400)
T ss_dssp -----------CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccCCCcccCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEE
Confidence 34555555577788876432 23688999999998763 2221111111123456789999999999975 444 4
Q ss_pred eCccHHHHHHhHhhhc----CCCC-EEEEcCCCchHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHHHHhcCCC
Q 046230 167 FGMGYVTNSAILPVLM----RKGS-LIISDSLNHNSIVNGARG---SGATIRVFQHN-----TPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 167 ~~sG~~a~~~~~~al~----~~g~-~Vl~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~ 233 (489)
.++|++++..++.++. ++|| .|+++.+.|+++...+.. .|++++.++.+ |+++|++++++
T Consensus 86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------- 158 (400)
T 3vax_A 86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP------- 158 (400)
T ss_dssp ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT-------
T ss_pred eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC-------
Confidence 4566778888888887 8999 999999999998766554 58999988876 78888877643
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
++.+|+++++++++|.+.++++|.++|++||++||+||+|+.|... .++... +|++++|++|.+
T Consensus 159 ------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~---------~~~~~~-~d~~~~s~~K~~ 222 (400)
T 3vax_A 159 ------DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVP---------GDLTTP-IDMISISGHKIG 222 (400)
T ss_dssp ------TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSG---------GGGGSC-CSEEEEETGGGT
T ss_pred ------CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCC---------cChhhc-CcEEEEeHHHhC
Confidence 4567888999999999999999999999999999999999854321 112111 489999999988
Q ss_pred CCcc-eEEE-eCH-HHH---HHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHH
Q 046230 314 GSCG-GYIA-GSK-ELI---QYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 314 g~~G-G~i~-~~~-~~~---~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
|+.| |+++ .++ ++. +.+...... .....+.++..++++.++++.+.. ..++.+++++++.+++.
T Consensus 223 g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~ 297 (400)
T 3vax_A 223 APKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEA-----EHAQWQVAAQDLRSRLL 297 (400)
T ss_dssp SCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHH-----SHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHH
Confidence 8766 7777 665 111 111111110 011234677788888888887632 45788999999999999
Q ss_pred HHHHhCCCeeeCCCC---CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCC------------cCCC----CCeEEEe
Q 046230 383 SELQKMGFEVLGDND---SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPA------------TPLL----LARARIC 443 (489)
Q Consensus 383 ~~L~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~------------~~~~----~~~iRi~ 443 (489)
+.|+..|+.+..+.. +.++.+.+. .....++.+.|. +||.+.+..... .+.. .+++||+
T Consensus 298 ~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls 375 (400)
T 3vax_A 298 AGLASTSFQVNGDQDHVVPHILNLSFE-DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFS 375 (400)
T ss_dssp HHHTTTTCEECSCTTSBCTTEEEEECT-TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEE
T ss_pred HhhCCCCEEEeCCcccCCCCEEEEEeC-CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEE
Confidence 999933888765543 346666554 346778999999 999876421000 0011 4899999
Q ss_pred e-cCCCCHHHHHHHHHHHHHHHHH
Q 046230 444 I-SASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 444 ~-~~~~t~edid~~l~~l~~~~~~ 466 (489)
+ +..+|++++++++++|+++++.
T Consensus 376 ~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 376 WTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEC--------------------
T ss_pred ccCCCCCHHHHHHHHHHHHHHhcc
Confidence 9 9999999999999999987653
No 137
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.96 E-value=9.6e-28 Score=239.31 Aligned_cols=332 Identities=14% Similarity=0.091 Sum_probs=228.4
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCE-EEeCccHHHHHHhH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAA-IVFGMGYVTNSAIL 178 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~-i~~~sG~~a~~~~~ 178 (489)
..+|||+++++. +.+|++.+++.+++..+ ...++..+...++++.+++++|.+.. +++++|++++..++
T Consensus 7 ~~~id~~~~~~~---~~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al 76 (356)
T 1v72_A 7 PPALGFSSDNIA---GASPEVAQALVKHSSGQ-------AGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCL 76 (356)
T ss_dssp CCCCBCSCGGGC---CCCHHHHHHHHHTTSSC-------CCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHH
T ss_pred CceEeeccCCcc---CCCHHHHHHHHhhccCc-------ccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHH
Confidence 468999876542 23588888888775211 12234567789999999999996554 55688889998888
Q ss_pred hhhcCCCCEEEEcCCCchHHHHH--HHhc--CCeEEEecCC----CHHHHHH-HHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 179 PVLMRKGSLIISDSLNHNSIVNG--ARGS--GATIRVFQHN----TPSHLEE-VLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 179 ~al~~~g~~Vl~~~~~h~~~~~~--~~~~--g~~~~~~~~~----d~~~Le~-~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
.++.++|+.|+++.++|+++... +... |++++.++.+ |+++|++ ++++... .+ ..++.+|+++++
T Consensus 77 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~-----~~-~~~~~~v~~~~~ 150 (356)
T 1v72_A 77 SAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGD-----VH-TTQPACVSITQA 150 (356)
T ss_dssp HTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTC-----TT-SCEEEEEEEESS
T ss_pred HHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchh-----hc-cCCceEEEEEcC
Confidence 88889999999999999987765 6666 9999888875 7888887 6653100 00 013456666766
Q ss_pred CCCCCCC---CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHH
Q 046230 250 YSMEGEL---CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKE 325 (489)
Q Consensus 250 ~s~~G~~---~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~ 325 (489)
++ +|.+ .++++|+++|++||++||+||+|..+.+...|... ..+++. ...|+++.|++|+.++.| |+++++++
T Consensus 151 ~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~-~~~d~~~~s~sK~g~~~G~g~~~~~~~ 227 (356)
T 1v72_A 151 TE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEMTWK-AGVDALSFGATKNGVLAAEAIVLFNTS 227 (356)
T ss_dssp CT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTTTGG-GTCCEEEECCGGGTCSSCEEEEESSGG
T ss_pred CC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHhhhh-hcCCEEEEecccCCCcCccEEEEECHH
Confidence 54 8984 55899999999999999999999733221112111 112211 134788889999944445 68888999
Q ss_pred HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEE
Q 046230 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIM 404 (489)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~ 404 (489)
+++.+...... .+. .+.....++.++++.+. .+...+..+++.++.+++++.|+++ |+.+..+..++++++.
T Consensus 228 ~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 300 (356)
T 1v72_A 228 LATEMSYRRKR--AGH-LSSKMRFLSAQIDAYLT----DDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCR 300 (356)
T ss_dssp GHHHHHHHHHH--TTC-CCSSTHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEE
T ss_pred HHhhHHHHhhc--cCc-hhhhHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEE
Confidence 88876543210 011 11111223334455552 1233457788899999999999986 8887666677777766
Q ss_pred eCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+. .++.+.|.++||.+.+..++ .+++|++++..+|++++++++++|++++++.
T Consensus 301 ~~-----~~~~~~l~~~gi~v~~g~~~-----~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 301 LD-----SAMIDALLKAGFGFYHDRWG-----PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp EC-----HHHHHHHHHTTCBCBCSSSS-----TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred cC-----HHHHHHHHhcCeEEeccccC-----CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 53 37899999999999853321 5789999988999999999999999876543
No 138
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.2e-27 Score=245.25 Aligned_cols=306 Identities=12% Similarity=0.018 Sum_probs=220.2
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEeCccHHHHH---HhHhhhcC--C----------CCEEEEcCCCchHHHHHHHhcCCe
Q 046230 145 LMVHNELEECVARFVGKP-AAIVFGMGYVTNS---AILPVLMR--K----------GSLIISDSLNHNSIVNGARGSGAT 208 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~~---~~~~al~~--~----------g~~Vl~~~~~h~~~~~~~~~~g~~ 208 (489)
.....+|++.+|++++.+ +.+++++|++.+. .++.++.. + |+.|+++.++|..+...++..|++
T Consensus 77 ~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~ 156 (427)
T 3ppl_A 77 LDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFE 156 (427)
T ss_dssp SSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCE
T ss_pred CCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCE
Confidence 334489999999999864 6777777765543 67777766 5 899999999999999999999999
Q ss_pred EEEecCC----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChH---HHHHHH-HHcCcEEEEEcccc
Q 046230 209 IRVFQHN----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP---EIIAIC-KKYKAYIYLDEAHS 280 (489)
Q Consensus 209 ~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~---~i~~l~-~~~~~~li~DEa~s 280 (489)
++.++.+ |+++|+++++. +..++++++...++++|.+.+.+ +|+++| ++||+++|+||+|+
T Consensus 157 ~~~v~~~~~g~d~~~l~~~l~~-----------~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~ 225 (427)
T 3ppl_A 157 MISVPMNEDGPDMDAVEELVKN-----------PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA 225 (427)
T ss_dssp EEEEEEETTEECHHHHHHHTTS-----------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred EEEeCCCCCCCCHHHHHHHHhc-----------CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc
Confidence 9888765 78888887742 12444444557889999998865 899999 99999999999999
Q ss_pred cccccCCCCccccccCC----CCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHH
Q 046230 281 IGAVGKTGRGVCELLEV----DTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 281 ~g~~g~~G~~~~~~~~v----~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
...++..+......+++ +..+.+|+++||||++ ++| ||+++++++++.+........+ +.+++.+.++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~G~r~G~~~~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~ 302 (427)
T 3ppl_A 226 VHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKIT-LAGAGVSFFLTSAENRKWYTGHAGIRGI--GPNKVNQLAHAR 302 (427)
T ss_dssp TCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTS-CTTSSCEEEECCHHHHHHHHHHHHHHCS--CCCHHHHHHHHH
T ss_pred ccccCCCCCCccchhhhhhccCCCCcEEEEechhhcc-CcCccEEEEEcCHHHHHHHHHHhhcccC--CCCHHHHHHHHH
Confidence 33354444322233332 1234579999999994 446 9999999999988765543333 367777777766
Q ss_pred HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh----C-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEee
Q 046230 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQK----M-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTV 428 (489)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 428 (489)
.|+... .......+.++.++++.+.+.+.|.+ + ++.+..+.++.++++.+... ...++.+.|.++||.+.+.
T Consensus 303 ~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~ 379 (427)
T 3ppl_A 303 YFGDAE--GVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-TASRVAELAKEAGIALTGA 379 (427)
T ss_dssp HHCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-CHHHHHHHHHHTTEECCCT
T ss_pred HHhChh--hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-hHHHHHHHHHHCCCEEecC
Confidence 664210 00013455666677777777777655 3 46666666788888887654 5778899999999999972
Q ss_pred c--CCCc-CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 429 A--FPAT-PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 429 ~--~p~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+ |+.. ....+++||+++. .++++|++++++|.++++++.
T Consensus 380 g~~~~~~~~~~~~~~Ris~~~-~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 380 GSSYPLRQDPENKNLRLAPSL-PPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp TTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCCCCCCCeEEEECCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 2 2211 1356899999954 499999999999999988764
No 139
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.96 E-value=3.4e-27 Score=241.56 Aligned_cols=343 Identities=11% Similarity=0.052 Sum_probs=234.8
Q ss_pred eeEecccccccCCCC-----CCccchHHHH--HHHHHhCCCCCCcccCC-CcchhHHHHHHHHHHHhCCC-CEEEeCccH
Q 046230 101 RCLNLGSYNYLGFAA-----SDEYCTPRVI--ESLKKYSPSTCSSRVDG-GTLMVHNELEECVARFVGKP-AAIVFGMGY 171 (489)
Q Consensus 101 ~~id~~s~~~lg~~~-----~~~~v~~a~~--~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g~~-~~i~~~sG~ 171 (489)
..|||+ .|.+. .++.+.+++. +.++ .+... ..+ +......+|++.+|++++.+ +.+++++|+
T Consensus 26 ~~i~l~----~g~p~~~~~~~~~~v~~a~~~~~~~~-~~~~~----~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~ 96 (423)
T 3ez1_A 26 LNLNMQ----RGQPADADFDLSNGLLTVLGAEDVRM-DGLDL----RNYPGGVAGLPSARALFAGYLDVKAENVLVWNNS 96 (423)
T ss_dssp CCEESC----CCCCCHHHHHTTGGGGGSCCGGGCEE-TTEET----TSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSC
T ss_pred ceEecC----CCCCChHhCCCcHHHHHHHhhhHHhh-cchhh----hCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCc
Confidence 367887 44443 2346777764 3333 12111 122 22333489999999999864 567776666
Q ss_pred H-HHH--HhHhhhcC--C---------CCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCC
Q 046230 172 V-TNS--AILPVLMR--K---------GSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 172 ~-a~~--~~~~al~~--~---------g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~ 233 (489)
+ ++. .++.++.. + |+.|+++.++|..+...++..|++++.++.+ |+++|++++++.
T Consensus 97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~------ 170 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTD------ 170 (423)
T ss_dssp HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHHSC------
T ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCCCCCHHHHHHHHhhC------
Confidence 5 445 78888777 7 5999999999999999999999999888764 889999988621
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCCChH---HHHHHH-HHcCcEEEEEcccccccccC-CCCccccccCC----CCCCccE
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELCKFP---EIIAIC-KKYKAYIYLDEAHSIGAVGK-TGRGVCELLEV----DTADVDI 304 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~~l~---~i~~l~-~~~~~~li~DEa~s~g~~g~-~G~~~~~~~~v----~p~~~Di 304 (489)
++.++++++..+++++|.+.+.+ +|+++| ++||++||+||+|+...+.. .+......+++ +..+.+|
T Consensus 171 ----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (423)
T 3ez1_A 171 ----PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAF 246 (423)
T ss_dssp ----TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEE
T ss_pred ----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEE
Confidence 12344444557899999998865 888898 99999999999999444433 22222223322 1234579
Q ss_pred EEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHH
Q 046230 305 MMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFF 381 (489)
Q Consensus 305 ~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (489)
+++||||++ .+| ||+++++++++.+........+ +.+++.+.++.+.|+.+.+ ......++.++.++++.+.+
T Consensus 247 ~~~S~sK~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l 322 (423)
T 3ez1_A 247 VFASTSKIT-FAGAGLGFVASSEDNIRWLSKYLGAQSI--GPNKVEQARHVKFLTEYPG-GLEGLMRDHAAIIAPKFRAV 322 (423)
T ss_dssp EEEESTTTS-CSSSSCEEEEECHHHHHHHHHHHHHSCS--CCCHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCchhhc-cCCcceEEEEeCHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHhccc-hHHHHHHHHHHHHHHHHHHH
Confidence 999999984 336 9999999999988765543333 3788888888777764100 00013344455555566665
Q ss_pred HHHHHh----CC--CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec-CCC--cCCCCCeEEEeecCCCCHHH
Q 046230 382 RSELQK----MG--FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA-FPA--TPLLLARARICISASHTKED 452 (489)
Q Consensus 382 ~~~L~~----~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~p~--~~~~~~~iRi~~~~~~t~ed 452 (489)
.+.|.+ +| +.+..+.+++++++.+... ....+.+.|.++||.+.+.+ +.. .+...+++||+++.. ++++
T Consensus 323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~ 400 (423)
T 3ez1_A 323 DEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEE 400 (423)
T ss_dssp HHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHH
T ss_pred HHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHH
Confidence 555544 55 6666666778888887654 56788899999999999722 211 123568999999644 9999
Q ss_pred HHHHHHHHHHHHHHhC
Q 046230 453 LIKALEVISRVGDLVG 468 (489)
Q Consensus 453 id~~l~~l~~~~~~~~ 468 (489)
+++++++|.++++++.
T Consensus 401 i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 401 VRTAMQVVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 140
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=1.2e-26 Score=234.81 Aligned_cols=318 Identities=16% Similarity=0.146 Sum_probs=235.4
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhh
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPV 180 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~a 180 (489)
++|||++ +.-++++.+++.+++++... +..+...++++.+|++++.+..+++++|++++..++.+
T Consensus 9 ~~i~~~~------p~~~~~~~~a~~~~~~~~~~---------~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~ 73 (393)
T 1mdo_A 9 DFLPFSR------PAMGAEELAAVKTVLDSGWI---------TTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMA 73 (393)
T ss_dssp CCBCSCC------CCCCHHHHHHHHHHHHHTCC---------SSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHH
T ss_pred cccccCC------CCCCHHHHHHHHHHHhcCCc---------CCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHH
Confidence 3567664 22347788999888877321 12456789999999999998888889999999888888
Q ss_pred h-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 181 L-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 181 l-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+ .++|+.|+++.+.|.++...++..|++++.++.+ |+++|++.+++ ++.+|++.+ ++
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~---~~ 137 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-------------QTKAIIPVH---YA 137 (393)
T ss_dssp TTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-------------TEEEECCBC---GG
T ss_pred cCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-------------CceEEEEeC---CC
Confidence 8 8899999999999999999999999999888743 67888877653 234454443 57
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCC-cceEEEeC-HHHHHH
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGS-CGGYIAGS-KELIQY 329 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~-~GG~i~~~-~~~~~~ 329 (489)
|.+.++++|.++|++||+++|+||+|+.|.. ..++. ++. .|+++.||+ |++++ .||+++++ +++++.
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~----~~~----~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~ 208 (393)
T 1mdo_A 138 GAPADLDAIYALGERYGIPVIEDAAHATGTS-YKGRH----IGA----RGTAIFSFHAIKNITCAEGGIVVTDNPQFADK 208 (393)
T ss_dssp GCCCCHHHHHHHHHHHTCCBCEECTTCTTCE-ETTEE----TTS----SSEEEEECCTTSSSCSSSCEEEEESCHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECccccCCe-ECCee----cCC----CCeEEEeCCCCCccccccceEEEeCCHHHHHH
Confidence 8889999999999999999999999996532 23321 222 389999999 99964 23899886 788888
Q ss_pred HHhhCCC---------------ccc-----c--cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 330 LKYTCPA---------------HLY-----A--TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 330 l~~~~~~---------------~~~-----~--~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
+...... +.+ + ..++++.++.+...++.+ ++..++.+++.+++++.|++
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~ 279 (393)
T 1mdo_A 209 LRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKL---------DALNARRAAIAAQYHQAMAD 279 (393)
T ss_dssp HHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhc
Confidence 7654321 111 0 135777777777776643 56777888899999999999
Q ss_pred CCCeeeCC------CCCCeEEEEeCC---CCcHHHHHHHHhhCCceEEeecCC--------------CcCC----CCCeE
Q 046230 388 MGFEVLGD------NDSPVMPIMLYN---PAKIPAFSRECLRQNVAVVTVAFP--------------ATPL----LLARA 440 (489)
Q Consensus 388 ~g~~v~~~------~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~v~~~~~p--------------~~~~----~~~~i 440 (489)
+++.+... ..++++++.+.. .....++.+.|.++||.+.+...| ..|. ..+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (393)
T 1mdo_A 280 LPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERIC 359 (393)
T ss_dssp SSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEE
T ss_pred CCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEE
Confidence 88665421 234567777653 346778999999999999864433 1111 13579
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 441 RICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 441 Ri~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
|+++...+|++|+++++++|+++++..
T Consensus 360 Ri~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 360 SLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999988899999999999999887654
No 141
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=6.2e-27 Score=232.85 Aligned_cols=292 Identities=19% Similarity=0.161 Sum_probs=217.5
Q ss_pred chhHHHHHHHHHHHhCCC---CEEEeC-ccHHHHHHhHhhhcCCCCEEEEcCCCchHH--HHHHHhcCCeEEEecC----
Q 046230 145 LMVHNELEECVARFVGKP---AAIVFG-MGYVTNSAILPVLMRKGSLIISDSLNHNSI--VNGARGSGATIRVFQH---- 214 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~--~~~~~~~g~~~~~~~~---- 214 (489)
.+...++++.+++++|.+ +.++++ +|++++..++.++.+ +.|++..+.|+++ ...++..|++++.++.
T Consensus 32 ~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 109 (353)
T 2yrr_A 32 LRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGE 109 (353)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCC
Confidence 455789999999999973 566664 556777777877766 6677777777764 3445677999888875
Q ss_pred -CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccc
Q 046230 215 -NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293 (489)
Q Consensus 215 -~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~ 293 (489)
.|+++|++.+++. ++.+|+++++++++|.+.++++|.++|++||+++|+||+|++|.. ...
T Consensus 110 ~~d~~~l~~~l~~~------------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~---~~~--- 171 (353)
T 2yrr_A 110 PVDPEAVARALKRR------------RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGML---PFS--- 171 (353)
T ss_dssp CCCHHHHHHHHHHS------------CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS---CCC---
T ss_pred CCCHHHHHHHHHhC------------CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccc---ccc---
Confidence 3789999988751 234667789999999999999999999999999999999974422 111
Q ss_pred ccCCCCCCccEEEccccccc-CCcc-eEEEeCHHHHHHHHh-h------------CCCcccccCCCHHHHHHHHHHHHHH
Q 046230 294 LLEVDTADVDIMMGTFTKSF-GSCG-GYIAGSKELIQYLKY-T------------CPAHLYATSISPPAAEQIISAIKVI 358 (489)
Q Consensus 294 ~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~~~~~~~~l~~-~------------~~~~~~~~~~~p~~~aa~~a~L~~i 358 (489)
.... ++|+++.|++|++ |++| |++++++++++.++. . .....+..+.++..++++.++++.+
T Consensus 172 ~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 248 (353)
T 2yrr_A 172 MRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLV 248 (353)
T ss_dssp HHHH---TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHH
T ss_pred cccc---CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 2389999999976 4457 999999998877641 0 0011122346777888888888876
Q ss_pred HccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCC
Q 046230 359 LGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLL 436 (489)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~ 436 (489)
... ..++.+++++++.+++.+.|+++|+.+..+. .+.++++.+.......++.+.|.++||.+.+...+ ..
T Consensus 249 ~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~---~~ 321 (353)
T 2yrr_A 249 LEE----GVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGP---TR 321 (353)
T ss_dssp HHH----CHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGG---GT
T ss_pred HHh----hHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccc---cC
Confidence 321 2567889999999999999999888876543 45666777654556788999999999999863321 23
Q ss_pred CCeEEEeecCCCCHHHHH-HHHHHHHHHHHH
Q 046230 437 LARARICISASHTKEDLI-KALEVISRVGDL 466 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid-~~l~~l~~~~~~ 466 (489)
.+++|++++..+|++|++ +++++|+++++.
T Consensus 322 ~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 322 GQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp TTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 578999997788999999 999999988753
No 142
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.96 E-value=5.8e-27 Score=238.91 Aligned_cols=333 Identities=12% Similarity=0.061 Sum_probs=229.3
Q ss_pred cceeEecccccccCCC---CCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh-CC-------CCEEE-
Q 046230 99 VNRCLNLGSYNYLGFA---ASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV-GK-------PAAIV- 166 (489)
Q Consensus 99 g~~~id~~s~~~lg~~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~-------~~~i~- 166 (489)
|+.+|||+++.|+... ..+|.+.+++.+++++.+. .. .++......++++.+++++ +. ++.++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~----~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~ 103 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSL-NH----EYLPILGLAEFRTCASRLALGDDSPALQEKRVGGV 103 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTC-CC----CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhh-cc----CCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEE
Confidence 6779999887765532 2346777777776632111 11 1122233488999999998 42 44555
Q ss_pred -eCccHHHHHHhHh--hhcCCC-----CEEEEcCCCchHHHHHHHhcCCe-EEEecC---C----CHHHHHHHHHHHHhc
Q 046230 167 -FGMGYVTNSAILP--VLMRKG-----SLIISDSLNHNSIVNGARGSGAT-IRVFQH---N----TPSHLEEVLREQIAE 230 (489)
Q Consensus 167 -~~sG~~a~~~~~~--al~~~g-----~~Vl~~~~~h~~~~~~~~~~g~~-~~~~~~---~----d~~~Le~~l~~~~~~ 230 (489)
+++|++++..++. ++..+| +.|+++.++|+++...++..|++ ++.++. + |+++|++.+++.
T Consensus 104 ~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 180 (412)
T 1ajs_A 104 QSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA--- 180 (412)
T ss_dssp EEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS---
T ss_pred ECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC---
Confidence 5667777766543 445788 89999999999999999999999 888876 3 788999888752
Q ss_pred CCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC---Cc-cccccCCCCCCcc
Q 046230 231 GQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG---RG-VCELLEVDTADVD 303 (489)
Q Consensus 231 g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G---~~-~~~~~~v~p~~~D 303 (489)
+ .+..++++..+++++|.+.+ +++|+++|++||++||+||+|+ .++.+| .. ....+...+ +.+
T Consensus 181 ------~-~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~-~~~ 250 (412)
T 1ajs_A 181 ------P-EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ--GFASGNLEKDAWAIRYFVSEG-FEL 250 (412)
T ss_dssp ------C-TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT--TTTTSCHHHHTHHHHHHHHTT-CCE
T ss_pred ------C-CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc--cccCCcccccchHHHHHhccC-CcE
Confidence 1 13456667888999998855 6799999999999999999999 777766 22 122121122 225
Q ss_pred EEEcccccccCCcc---eEEEe---CHH----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc-cCCCchHHHHHH
Q 046230 304 IMMGTFTKSFGSCG---GYIAG---SKE----LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG-EDGSSRGAQKLA 372 (489)
Q Consensus 304 i~~~t~sK~~g~~G---G~i~~---~~~----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~-~~~~~~~~~~~~ 372 (489)
|++.||||++|++| ||+++ +++ +++.+..... ..++ ..+++.++++.++|+...- .......++.++
T Consensus 251 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 328 (412)
T 1ajs_A 251 FCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVR-VTWS-NPPAQGARIVARTLSDPELFHEWTGNVKTMAD 328 (412)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHH-TTTS-SCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHh-cccC-CCChHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence 88999999999888 99998 887 4444443111 1121 2577788888888864300 000014567888
Q ss_pred HHHHHHHHHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCC
Q 046230 373 RIRENSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASH 448 (489)
Q Consensus 373 ~~~~~~~~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~ 448 (489)
+++++.+++.+.|++++ +.+..+.++.++++.+ ....+.+.+.++||.+.+ .+||+++ .+
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gv~v~~-----------~~Ris~~-~~ 392 (412)
T 1ajs_A 329 RILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL----NPKQVEYLINQKHIYLLP-----------SGRINMC-GL 392 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC----CHHHHHHHHHTTCEECCT-----------TSEEEGG-GC
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC----CHHHHHHHHHhCCEEecC-----------CcEEEee-eC
Confidence 99999999999999986 6655555565543322 234444555677999872 2699986 35
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q 046230 449 TKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 449 t~edid~~l~~l~~~~~~~ 467 (489)
|++++++++++|+++++++
T Consensus 393 ~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 393 TTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp CTTTHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 143
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.96 E-value=1.9e-28 Score=264.14 Aligned_cols=399 Identities=13% Similarity=0.065 Sum_probs=254.4
Q ss_pred CCCCCCccc-ccChHHHHHHHHHhhhhcccCCCccCCCCCeEEEeeccccCCcccccccCccceeEecccccccCCCCCC
Q 046230 39 NNLQGYAPI-CLGLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASD 117 (489)
Q Consensus 39 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~i~~~dr~~~~~~~~~~~~~~g~~~id~~s~~~lg~~~~~ 117 (489)
...+||.|+ +++|++||.|+++.++.++|++ .+...+..+.+...+++..+..++. ...-|+.. +
T Consensus 74 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~----~~~pi~~al~~~~~~~~~~~~~Pgh---------~~g~~~~~-~ 139 (730)
T 1c4k_A 74 KKIFHIIDLENKFDATVNAREIETAVNNYEDS----ILPPFFKSLKEYVSRYLIQFDCPGH---------QGGQYYRK-H 139 (730)
T ss_dssp TTCCEEEECC--CCSTTHHHHHHHHHHHHHHH----HSCHHHHHHHHHHTSCCCCCSSSTT---------TTTTTGGG-S
T ss_pred hhcCeeEecccCCcHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHhcCCcccccCcc---------ccccccCC-c
Confidence 456799999 9999999999999999999976 2444444443333332222222210 00011110 1
Q ss_pred ccchHHHHHHH----HHhCCCC--CCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEE
Q 046230 118 EYCTPRVIESL----KKYSPST--CSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIIS 190 (489)
Q Consensus 118 ~~v~~a~~~~l----~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~ 190 (489)
| +-+.+.+.+ -+..... .......+....+.++++.+|+++|.+.++++++|+ ++|.+++.+++++||.|++
T Consensus 140 p-~g~~~~~~~g~~~~~~di~~~~~~l~~l~~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv 218 (730)
T 1c4k_A 140 P-AGREFYDFFGETVFRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLF 218 (730)
T ss_dssp H-HHHHHHHHHCSHHHHSCCCTTSGGGCBTTTTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred c-hhhHHHhhcchhhhhHHhhhhhccCCCccCChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 111222222 1111111 011122344567899999999999999999898887 6679999999999999999
Q ss_pred cCCCchHHHHH-HHhcCCeEEEecC----------CCHHHH-HHHHHHHHhcCCCC-CCCCCc-cEEEEEcCcCCCCCCC
Q 046230 191 DSLNHNSIVNG-ARGSGATIRVFQH----------NTPSHL-EEVLREQIAEGQPR-THRPWK-KIMVIVEGIYSMEGEL 256 (489)
Q Consensus 191 ~~~~h~~~~~~-~~~~g~~~~~~~~----------~d~~~L-e~~l~~~~~~g~~~-~~~~~~-~~~vive~v~s~~G~~ 256 (489)
+.++|.++..+ ++++|+.++.++. -|+++| ++.|++.+.+.+|. .+.++. ++++++.+ +.+|.+
T Consensus 219 ~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p--n~~G~v 296 (730)
T 1c4k_A 219 DRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG--TYDGTI 296 (730)
T ss_dssp ETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB--CTTSEE
T ss_pred cCCchHHHHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC--CCCCee
Confidence 99999999998 8899999877643 178888 33333332211000 001112 55666655 358999
Q ss_pred CChHHHHHHHHHcCcEEEEEcccccc-cccCCCCc--cc--cccCCCCCCccEEEcccccccCCc--ceEEEeCHHH---
Q 046230 257 CKFPEIIAICKKYKAYIYLDEAHSIG-AVGKTGRG--VC--ELLEVDTADVDIMMGTFTKSFGSC--GGYIAGSKEL--- 326 (489)
Q Consensus 257 ~~l~~i~~l~~~~~~~li~DEa~s~g-~~g~~G~~--~~--~~~~v~p~~~Di~~~t~sK~~g~~--GG~i~~~~~~--- 326 (489)
.++++|+++|++||++|++||||+.+ .++..+++ .. +.++.+ ...++++.|+||++++. ||++..+++.
T Consensus 297 ~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D-~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g 375 (730)
T 1c4k_A 297 YNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPE-DPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG 375 (730)
T ss_dssp ECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTT-SCEEEEEECHHHHSSCCTTCEEEEEECGGGTT
T ss_pred cCHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCC-CCCEEEEECCCCCCCCCCCEEEEEecchhhcC
Confidence 99999999999999999999999733 23332221 11 112332 11139999999999764 3666443222
Q ss_pred ----H--HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh--CCCeeeCCC--
Q 046230 327 ----I--QYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK--MGFEVLGDN-- 396 (489)
Q Consensus 327 ----~--~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~v~~~~-- 396 (489)
+ ..+.... ....+++.++..+++..++++.+.. ..+++.++++.++.+++++.|++ .|+.+..+.
T Consensus 376 ~~~~i~~~~~~~~~-~~~~stsp~~~~iaal~aA~~~l~~----~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~ 450 (730)
T 1c4k_A 376 QLRYCDHKHFNNSF-NLFMSTSPFYPMYAALDVNAAMQEG----EAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVV 450 (730)
T ss_dssp STTCCCHHHHHHHH-HHHSCSSCCHHHHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEE
T ss_pred cccccCHHHHHHHH-HHhCCCCCcHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccc
Confidence 1 1222111 1123456788888888888887731 13577889999999999999998 488775431
Q ss_pred -----------------------------------CCC--e----EEEEeCC-----------CCcHHHHHHHHhhCCce
Q 046230 397 -----------------------------------DSP--V----MPIMLYN-----------PAKIPAFSRECLRQNVA 424 (489)
Q Consensus 397 -----------------------------------~~~--~----~~~~~~~-----------~~~~~~~~~~l~~~Gi~ 424 (489)
.+. + +.+.... ......+.+.|.++||.
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~ 530 (730)
T 1c4k_A 451 NGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGII 530 (730)
T ss_dssp TTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCC
T ss_pred ccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcE
Confidence 110 1 2233311 23567899999999998
Q ss_pred EEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 425 VVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 425 v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+... +.+++|++++..+|++++++++++|.++.+.+
T Consensus 531 v~~~-------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 531 PEKS-------DLNSILFLMTPAETPAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp CSEE-------CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEC-------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8632 35789999999999999999999999988765
No 144
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=2.3e-26 Score=231.82 Aligned_cols=317 Identities=15% Similarity=0.142 Sum_probs=223.7
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-----CEEEe-CccHHHHHHhHhhhc---CCCCE
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-----AAIVF-GMGYVTNSAILPVLM---RKGSL 187 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~-~sG~~a~~~~~~al~---~~g~~ 187 (489)
+..+.+++.+++.+.......+ .......++++.++++++.. +.+++ ++|++++..++.++. ++|+.
T Consensus 13 p~~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~ 88 (385)
T 2bkw_A 13 PIILSGAVQKALDVPSLGHTSP----EFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKN 88 (385)
T ss_dssp SCCCCHHHHHTTSCCCCCTTSH----HHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCE
T ss_pred CcCchHHHHHHHhccccccCCH----HHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCe
Confidence 3445566666665533221110 11234567889999998863 44544 677888888888887 88998
Q ss_pred EEEc-CCCchHH-HHHHHhcCCeEEEecC-C-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh
Q 046230 188 IISD-SLNHNSI-VNGARGSGATIRVFQH-N-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF 259 (489)
Q Consensus 188 Vl~~-~~~h~~~-~~~~~~~g~~~~~~~~-~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l 259 (489)
|++. .++|+.. ...++..|++++.++. + |+++|++++++ .++.+|+++++++++|.+.++
T Consensus 89 vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~------------~~~~~v~~~~~~nptG~~~~l 156 (385)
T 2bkw_A 89 VLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ------------NSYGAVTVTHVDTSTAVLSDL 156 (385)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH------------SCCSEEEEESEETTTTEECCH
T ss_pred EEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc------------CCCCEEEEEccCCCcCeEcCH
Confidence 7665 5555554 3567778999998887 3 78999998875 133466778899999999999
Q ss_pred HHHHHHHHHc--CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHH-HHHh--
Q 046230 260 PEIIAICKKY--KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQ-YLKY-- 332 (489)
Q Consensus 260 ~~i~~l~~~~--~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~-~l~~-- 332 (489)
++|.++|++| |+++|+||+|+.|.. .+++...++|+++.|++|+++ ++| |++++++++++ .++.
T Consensus 157 ~~i~~~~~~~~~~~~li~D~a~~~~~~---------~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~ 227 (385)
T 2bkw_A 157 KAISQAIKQTSPETFFVVDAVCSIGCE---------EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSK 227 (385)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTTTTTS---------CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHH
T ss_pred HHHHHHHHhhCCCCEEEEECccccCCc---------cccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhcc
Confidence 9999999999 999999999985432 112222235899999999875 567 99999988876 4421
Q ss_pred --------------------hCCC-cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHH-HhCCC
Q 046230 333 --------------------TCPA-HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL-QKMGF 390 (489)
Q Consensus 333 --------------------~~~~-~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g~ 390 (489)
...+ ..+..+.++..++++.++|+.+... ..++.+++++++.+++.+.| +++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~ 303 (385)
T 2bkw_A 228 NGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEE----GLHKRWDLHREMSDWFKDSLVNGLQL 303 (385)
T ss_dssp HCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHc----cHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 0000 0111247777888888888876310 24677889999999999999 88888
Q ss_pred eeeCC-----CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEe-ec---CCCCHHHHHHHHHHHH
Q 046230 391 EVLGD-----NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARIC-IS---ASHTKEDLIKALEVIS 461 (489)
Q Consensus 391 ~v~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~-~~---~~~t~edid~~l~~l~ 461 (489)
.+..+ ..++++++.+.. ..++.+.|.++||.+.+...+ +...+.+|++ ++ ..+|++|+++++++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~--~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~ 378 (385)
T 2bkw_A 304 TSVSRYPSNMSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIHK--DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIK 378 (385)
T ss_dssp EESSCSSSTTBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCCT--TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred eecccCcccccCCceEEEecCC---HHHHHHHHHHCCeEEeCCCCc--ccCCCEEEEEccccccccCCHHHHHHHHHHHH
Confidence 87642 246677777643 678999999999999853321 1235789999 54 2479999999999999
Q ss_pred HHHHHh
Q 046230 462 RVGDLV 467 (489)
Q Consensus 462 ~~~~~~ 467 (489)
++++++
T Consensus 379 ~~~~~~ 384 (385)
T 2bkw_A 379 LALQRK 384 (385)
T ss_dssp HHTTC-
T ss_pred HHHHhc
Confidence 887543
No 145
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.95 E-value=3.2e-26 Score=233.54 Aligned_cols=336 Identities=17% Similarity=0.181 Sum_probs=227.6
Q ss_pred eeEec-ccccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCcchhHHH----HHHHHHHHhCCCCE-EEeCccHHH
Q 046230 101 RCLNL-GSYNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGTLMVHNE----LEECVARFVGKPAA-IVFGMGYVT 173 (489)
Q Consensus 101 ~~id~-~s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~~-i~~~sG~~a 173 (489)
+.|++ ++.|++ +|.+.+++.+++. .++.+..+++...+ .....+ +++.+++++|.+.. +++++|+++
T Consensus 26 ~~i~l~~~~~~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a 99 (417)
T 3n0l_A 26 EGLEMIASENFT-----LPEVMEVMGSILTNKYAEGYPGKRYYGG-CEFVDEIETLAIERCKKLFNCKFANVQPNSGSQA 99 (417)
T ss_dssp HSEECCTTCCCC-----CHHHHHHHTBGGGGCCCCEETTEESSSC-CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHH
T ss_pred cCeeeecccCCC-----CHHHHHHHhhhhhccccccCCCcccccc-chHHHHHHHHHHHHHHHHhCCCCcceEeccHHHH
Confidence 45666 444543 5889999998884 34433333222222 233344 44588999998755 888999999
Q ss_pred HHHhHhhhcCCCCEEEEcCCCchHHHH---HHHhc--CCeEEEecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 174 NSAILPVLMRKGSLIISDSLNHNSIVN---GARGS--GATIRVFQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 174 ~~~~~~al~~~g~~Vl~~~~~h~~~~~---~~~~~--g~~~~~~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
+..++.++.++||.|+++.++|+++.. ..... +..++.++. .|+++|++++++. +.+++
T Consensus 100 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~~~v 168 (417)
T 3n0l_A 100 NQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE-----------KPKLI 168 (417)
T ss_dssp HHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH-----------CCSEE
T ss_pred HHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc-----------CCeEE
Confidence 988999999999999999999987544 22333 334555554 3899999999742 24444
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc-ceEEEe
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAG 322 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-GG~i~~ 322 (489)
+ +.+.. .|...++++|.++|++||++||+||+|+.|.+. .|.. ... ....||+++|+||+|+++ ||++++
T Consensus 169 ~-~~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~----~~~-~~~~di~~~s~sK~l~g~~~G~~~~ 239 (417)
T 3n0l_A 169 V-CGASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVV-AGEH----PSP-FPYAHVVSSTTHKTLRGPRGGIIMT 239 (417)
T ss_dssp E-ECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHH-TTSS----CCC-TTTCSEEEEESSTTTCSCSCEEEEE
T ss_pred E-ECCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhh-cccC----CCc-cccceEEEeeCccccCCCCeeEEEE
Confidence 4 43322 388999999999999999999999998755432 1211 111 013589999999999543 699999
Q ss_pred C-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCe
Q 046230 323 S-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-NDSPV 400 (489)
Q Consensus 323 ~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-~~~~~ 400 (489)
+ +++++.+........ ..+.++..++++.+++..+. ..+.++.++++.++.+++.+.|++.|+.+... ..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~~~~~~aa~~~a~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 314 (417)
T 3n0l_A 240 NDEELAKKINSAIFPGI-QGGPLMHVIAAKAVGFKFNL----SDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHL 314 (417)
T ss_dssp SCHHHHHHHHHHHTTTT-CSSCCHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSE
T ss_pred CCHHHHHHHhhhhCCcc-cCCcHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceE
Confidence 8 788888876543322 22356667777777776541 12457888999999999999999988887642 34556
Q ss_pred EEEEeCCC-CcHHHHHHHHhhCCceEEeecCCCc---CCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHHh
Q 046230 401 MPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPAT---PLLLARARICISA----SHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 401 ~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~~---~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~~ 467 (489)
+++.+... .....+.+.|.++||.+.+...|.. +...+.+|++++. .++++++++++++|.+++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 315 VLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp EEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 66666433 3567888889899999997555533 3345779998753 367999999999999998754
No 146
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.95 E-value=6.7e-26 Score=226.74 Aligned_cols=277 Identities=17% Similarity=0.195 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHhCCC-CEEEeCccH-HHHHHhHhhhcCCC-CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHH
Q 046230 148 HNELEECVARFVGKP-AAIVFGMGY-VTNSAILPVLMRKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSH 219 (489)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~~~~al~~~g-~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~ 219 (489)
..++++.+|++++.+ +.+++++|+ +++..++.++.++| +.|++..++|.++...++..|++++.++.+ |+++
T Consensus 60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 139 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQG 139 (356)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHH
T ss_pred HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHH
Confidence 479999999999865 567776664 55688888998999 999999999999999999999999888764 5666
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh---HHHHHHHHHcCcEEEEEcccccccccCCCCccccccC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF---PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLE 296 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l---~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~ 296 (489)
|++.++ +.+ +|++.++++++|.+.+. ++|+++|+ +|+++|+||+|+ .+++ +.......+
T Consensus 140 l~~~i~-------------~~~-~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~--~~~~-~~~~~~~~~ 201 (356)
T 1fg7_A 140 ISDKLD-------------GVK-VVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYI--EFCP-QASLAGWLA 201 (356)
T ss_dssp HHTSCT-------------TEE-EEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTG--GGSG-GGCSGGGTT
T ss_pred HHHHhc-------------CCC-EEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccch--hhcC-CCcHHHHHh
Confidence 655442 133 45556788999999874 55566666 999999999999 5552 111222222
Q ss_pred CCCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
..+.+++++||||++|.+| ||+++++++++.+......+ +.|++.++++.++|+... ..+.++.+++
T Consensus 202 --~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~----~~~~~~~~~~ 271 (356)
T 1fg7_A 202 --EYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY----PLSTPVADIAAQALSPQG----IVAMRERVAQ 271 (356)
T ss_dssp --TCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS----CSCHHHHHHHHHHTSHHH----HHHHHHHHHH
T ss_pred --hCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCcc----HHHHHHHHHH
Confidence 1234788999999999778 99999999999988765543 388888888888876431 0025778888
Q ss_pred HHHHHHHHHHHHHhCC--CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe-ecCCCcCCCCCeEEEeecCCCCH
Q 046230 374 IRENSNFFRSELQKMG--FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT-VAFPATPLLLARARICISASHTK 450 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~p~~~~~~~~iRi~~~~~~t~ 450 (489)
++++.+++.+.|++++ +.+ .+..++++++.+. ...++.++|.++||.+.+ ..++. ..+++||+++ ++
T Consensus 272 ~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~---~~~~l~~~L~~~gI~v~~~g~~~~---~~~~iRis~~---~~ 341 (356)
T 1fg7_A 272 IIAEREYLIAALKEIPCVEQV-FDSETNYILARFK---ASSAVFKSLWDQGIILRDQNKQPS---LSGCLRITVG---TR 341 (356)
T ss_dssp HHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET---THHHHHHHHHHTTEECEECTTSTT---CTTEEEEECC---CH
T ss_pred HHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCCC---CCCeEEEEeC---CH
Confidence 9999999999999986 343 3445777777665 567899999999999997 33322 1368999984 68
Q ss_pred HHHHHHHHHHHH
Q 046230 451 EDLIKALEVISR 462 (489)
Q Consensus 451 edid~~l~~l~~ 462 (489)
+|+++++++|++
T Consensus 342 ~e~~~~~~~l~~ 353 (356)
T 1fg7_A 342 EESQRVIDALRA 353 (356)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 147
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.2e-26 Score=233.30 Aligned_cols=318 Identities=14% Similarity=0.091 Sum_probs=229.7
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP 179 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~ 179 (489)
..++|++ .+.+...+ +.+++.+.+.... ++..+...++++.++++++.++.+++++|++++..++.
T Consensus 6 ~~~~~l~----~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~ 71 (374)
T 3uwc_A 6 VPYSYLE----RQFADIEP-YLNDLREFIKTAD---------FTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFK 71 (374)
T ss_dssp BCSCCHH----HHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH
T ss_pred ceeeccc----cCCCCchH-HHHHHHHHHHcCC---------cccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHH
Confidence 4466665 33333333 6666666665521 12356678999999999999988999999999988888
Q ss_pred hh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 180 VL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 180 al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
++ .++|+.|+++.++|+++...++..|++++.++.+ |+++|++.+++ ++.+|+ +.+++
T Consensus 72 ~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-------------~~~~v~---~~n~~ 135 (374)
T 3uwc_A 72 MLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITD-------------KTKAIM---PVHYT 135 (374)
T ss_dssp HTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT-------------TEEEEC---CBCGG
T ss_pred HcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC-------------CceEEE---EeCCc
Confidence 88 8999999999999999999999999999999876 88888877643 333444 56789
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCCc--ceEEEeC-HHHHH
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGSC--GGYIAGS-KELIQ 328 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~~--GG~i~~~-~~~~~ 328 (489)
|.+.++++|.++|++||+++|+||+|+.|.. ..+ ...+..+ |+++.|++ |++++. ||+++++ +++.+
T Consensus 136 G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~-~~~----~~~~~~~---d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~ 207 (374)
T 3uwc_A 136 GNIADMPALAKIAKKHNLHIVEDACQTILGR-IND----KFVGSWG---QFACFSLHPLKNLNVWSDAGVIITHSDEYAE 207 (374)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETT----EETTSSS---SEEEEECSSSSSSCCSSCCEEEEESCHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCEEEEeCCCccCce-eCC----eeccccc---cEEEEeCCCCCcCCccceeEEEEeCCHHHHH
Confidence 9999999999999999999999999995533 111 1222223 89988877 999874 4888765 56766
Q ss_pred HHHhhCCC----------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeeeCCC
Q 046230 329 YLKYTCPA----------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG--FEVLGDN 396 (489)
Q Consensus 329 ~l~~~~~~----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~v~~~~ 396 (489)
.+...... ..+...++++.++.....++ ..++..++.+++.+++++.|++++ +.+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 208 KLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN---------QLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp HHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG---------GHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 66543321 11222467777776666554 346788888999999999999885 6553222
Q ss_pred CC-----CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc---C-----------------CCCCeEEEeecCCCCHH
Q 046230 397 DS-----PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT---P-----------------LLLARARICISASHTKE 451 (489)
Q Consensus 397 ~~-----~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~---~-----------------~~~~~iRi~~~~~~t~e 451 (489)
.. ..+++.. ....++.+.|.++||.+.+...+.. | ...+.+|++++..+|++
T Consensus 279 ~~~~~~~~~~~~~~---~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~e 355 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV---KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEE 355 (374)
T ss_dssp TTEECCCSSEEEEE---TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHH
T ss_pred CCCceeeEEEEEEc---CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHH
Confidence 11 2233332 2567899999999999885331111 0 01268999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 046230 452 DLIKALEVISRVGDLV 467 (489)
Q Consensus 452 did~~l~~l~~~~~~~ 467 (489)
||++++++|++++++.
T Consensus 356 di~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 356 EINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 148
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.95 E-value=2.3e-27 Score=241.09 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=233.7
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHh
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILP 179 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~ 179 (489)
+++|||+++... + ++.+.+++.+++.+.. ++..+...+++++++++++.++.+++++|++++..++.
T Consensus 30 ~~~id~~~~~~~-~---~~~v~~a~~~~~~~~~---------y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~ 96 (399)
T 2oga_A 30 VPFLDLKAAYEE-L---RAETDAAIARVLDSGR---------YLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALR 96 (399)
T ss_dssp BCSCCHHHHHHH-T---HHHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHH
T ss_pred CcccccCcCCCC-C---CHHHHHHHHHHHhcCC---------CCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHH
Confidence 568998644221 2 2788999998887521 11235668999999999999888889999999988888
Q ss_pred hh-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCC
Q 046230 180 VL-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252 (489)
Q Consensus 180 al-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~ 252 (489)
++ .++|+.|+++.+.|+++...++..|++++.++.+ |+++|++.+++ ++.+|++ .++
T Consensus 97 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------------~~~~v~~---~n~ 160 (399)
T 2oga_A 97 GLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP-------------RTRALLP---VHL 160 (399)
T ss_dssp HTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-------------TEEEECC---BCG
T ss_pred HhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-------------CCeEEEE---eCC
Confidence 88 8899999999999999999999999999888643 67888877643 2344443 356
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCCcc--eEEEeC-HHHH
Q 046230 253 EGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGSCG--GYIAGS-KELI 327 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~~G--G~i~~~-~~~~ 327 (489)
+|.+.++++|.++|+++|+++|+||+|+.|.. .++.. ++.-+ |+++.|+ +|++|++| |+++.+ ++++
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-~~~~~----~~~~~---di~~~S~~~sK~~~~~G~~g~~~~~~~~~~ 232 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGAR-YRGRR----IGAGS---SVAAFSFYPGKNLGCFGDGGAVVTGDPELA 232 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCE-ETTEE----TTCTT---CEEEEECCTTSSSCCSSCCEEEEESCHHHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCc-cCCee----ccccc---CEEEEeCCCCccCCcCCceEEEEeCCHHHH
Confidence 89999999999999999999999999985533 23322 22113 8998898 79998754 888886 8888
Q ss_pred HHHHhhCCC-c---------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC
Q 046230 328 QYLKYTCPA-H---------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDN 396 (489)
Q Consensus 328 ~~l~~~~~~-~---------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~ 396 (489)
+.+...... . .+...++++.++++.++|+.+ ++..++.+++.+++++.|+++ |+.+....
T Consensus 233 ~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 303 (399)
T 2oga_A 233 ERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL---------DSWNGRRSALAAEYLSGLAGLPGIGLPVTA 303 (399)
T ss_dssp HHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHTTTCTTCBCCCCC
T ss_pred HHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCCccccCCC
Confidence 777543211 0 111247889898888888755 456777788899999999887 66653222
Q ss_pred -C-CCe---EEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCC--------C-------------CCeEEEeecCCCCH
Q 046230 397 -D-SPV---MPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPL--------L-------------LARARICISASHTK 450 (489)
Q Consensus 397 -~-~~~---~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~--------~-------------~~~iRi~~~~~~t~ 450 (489)
. .++ +++. .....++.+.|.++||.+.+ +++.... + .+.+||+++..+|+
T Consensus 304 ~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~v~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~ 379 (399)
T 2oga_A 304 PDTDPVWHLFTVR---TERRDELRSHLDARGIDTLT-HYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLER 379 (399)
T ss_dssp TTEECCCSSEEEE---CSSHHHHHHHHHHTTBCCBC-SCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCH
T ss_pred CCCcceeEEEEEE---CCCHHHHHHHHHHCCCceec-CCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCH
Confidence 1 221 2222 13567899999999999975 3321100 0 25799999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 046230 451 EDLIKALEVISRVGDLV 467 (489)
Q Consensus 451 edid~~l~~l~~~~~~~ 467 (489)
+|+++++++|+++++++
T Consensus 380 edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 380 PQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988754
No 149
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=6.2e-27 Score=242.73 Aligned_cols=319 Identities=12% Similarity=0.088 Sum_probs=230.9
Q ss_pred CccchHHHHHHHHHhCCCCCC-cc-cCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHHH-HHhHhhhcCC---CCEEE
Q 046230 117 DEYCTPRVIESLKKYSPSTCS-SR-VDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVTN-SAILPVLMRK---GSLII 189 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~-~~-~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a~-~~~~~al~~~---g~~Vl 189 (489)
++.+.+++.+++..++..... .. ...+..+..+++++++++++|.+ +.+++++|++++ ..++.++..+ ++.|+
T Consensus 80 p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl 159 (465)
T 3e9k_A 80 PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKIL 159 (465)
T ss_dssp ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEE
T ss_pred hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEE
Confidence 567888888888765422111 11 11233466688999999999975 567776666555 7778888654 45699
Q ss_pred EcCCCchHHHH----HHHhcCCeE-----EEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC
Q 046230 190 SDSLNHNSIVN----GARGSGATI-----RVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255 (489)
Q Consensus 190 ~~~~~h~~~~~----~~~~~g~~~-----~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~ 255 (489)
++.+.|++... .++..|..+ ...+.+ |+++|+++|+++. .++++|+++++++++|.
T Consensus 160 ~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~----------~~~~lv~~~~~~n~tG~ 229 (465)
T 3e9k_A 160 LEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG----------DSIAVILFSGVHFYTGQ 229 (465)
T ss_dssp EETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG----------GGEEEEEEESBCTTTCB
T ss_pred EcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC----------CCeEEEEEeCcccCcce
Confidence 99999998544 455577763 233332 7899999997531 25678889999999999
Q ss_pred CCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc--CCcc-eEEEeCHHHHHHHHh
Q 046230 256 LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF--GSCG-GYIAGSKELIQYLKY 332 (489)
Q Consensus 256 ~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~--g~~G-G~i~~~~~~~~~l~~ 332 (489)
+.++++|.++|++||+++|+|++|+.|.+. .++...++|++++|++|.+ |+.| |+++.++++++.+..
T Consensus 230 ~~~l~~i~~la~~~g~~vi~D~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~ 300 (465)
T 3e9k_A 230 HFNIPAITKAGQAKGCYVGFDLAHAVGNVE---------LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP 300 (465)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTSC---------CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCC
T ss_pred eecHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCC
Confidence 999999999999999999999999965431 1111123489999999999 4434 899999888765543
Q ss_pred hCCCcc---------------c--------ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh--
Q 046230 333 TCPAHL---------------Y--------ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-- 387 (489)
Q Consensus 333 ~~~~~~---------------~--------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 387 (489)
...++. + ..+.+++.+++..++++.+... ..++++++..++.+++.+.|++
T Consensus 301 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~ 376 (465)
T 3e9k_A 301 ALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA----TMKALRKKSVLLTGYLEYLIKHNY 376 (465)
T ss_dssp SSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222210 0 0156788888889999887421 2578899999999999999998
Q ss_pred ---------CCCeeeCCC----CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee-cCCCCHHHH
Q 046230 388 ---------MGFEVLGDN----DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICI-SASHTKEDL 453 (489)
Q Consensus 388 ---------~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~-~~~~t~edi 453 (489)
.|+.+..+. .+.++++.+. ....++.+.|.++||.+.. ...+++||++ +..+|++|+
T Consensus 377 ~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~~-------~~~~~iRis~~~~~~t~edi 447 (465)
T 3e9k_A 377 GKDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCDK-------RNPNGIRVAPVPLYNSFHDV 447 (465)
T ss_dssp C---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECEE-------ETTTEEEEBCCTTTCCHHHH
T ss_pred cccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEec-------CCCCEEEEeCcccCCCHHHH
Confidence 578777654 3667777665 3345789999999999872 2347899998 899999999
Q ss_pred HHHHHHHHHHHHHh
Q 046230 454 IKALEVISRVGDLV 467 (489)
Q Consensus 454 d~~l~~l~~~~~~~ 467 (489)
++++++|++++++.
T Consensus 448 ~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 448 YKFTNLLTSILDSA 461 (465)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988654
No 150
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=6.8e-26 Score=234.87 Aligned_cols=339 Identities=11% Similarity=0.128 Sum_probs=232.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|+.||||.+ +++. +.+.+++.+++.. +.. .++..+...+++++++++++.++.+++++|++++..++
T Consensus 42 g~~ylD~~~----~~~~--~~v~~a~~~~~~~-~~~------~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 42 SAVYIDLLT----DSGT--NAMSDHQWAAMIT-GDE------AYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILF 108 (467)
T ss_dssp GGCSEECSC----SSSC--CCEEHHHHHHHHT-CCC------CSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHH
T ss_pred Cceeeeccc----CcCC--HHHHHHHHHHHhh-ccc------ccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHH
Confidence 788999863 3332 6788988888764 211 12334566899999999999988888888999998888
Q ss_pred hhhcC----CCCE---EEEcCCCchHHHHHHHhcCCeEEEec------------C---CCHHHHHHHHHHHHhcCCCCCC
Q 046230 179 PVLMR----KGSL---IISDSLNHNSIVNGARGSGATIRVFQ------------H---NTPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 179 ~al~~----~g~~---Vl~~~~~h~~~~~~~~~~g~~~~~~~------------~---~d~~~Le~~l~~~~~~g~~~~~ 236 (489)
.++.. +||. |++..+.|..+...+...|+.++.++ . .|+++|++++++..
T Consensus 109 ~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-------- 180 (467)
T 1ax4_A 109 PVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG-------- 180 (467)
T ss_dssp HHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--------
T ss_pred HHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--------
Confidence 88887 8986 77775555777777888888877542 1 27899999997630
Q ss_pred CCCccEEEEEcCcCCCC-CCCC---ChHHHHHHHHHcCcEEEEEccccc-ccc-------cCCCCcccccc-CCCCCCcc
Q 046230 237 RPWKKIMVIVEGIYSME-GELC---KFPEIIAICKKYKAYIYLDEAHSI-GAV-------GKTGRGVCELL-EVDTADVD 303 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~-G~~~---~l~~i~~l~~~~~~~li~DEa~s~-g~~-------g~~G~~~~~~~-~v~p~~~D 303 (489)
+.++.+|+++++++++ |.+. ++++|+++|++||++||+||+|.+ +.+ +..|....+.. +. ....|
T Consensus 181 -~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d 258 (467)
T 1ax4_A 181 -ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM-YKYAD 258 (467)
T ss_dssp -GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHH-GGGCS
T ss_pred -CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhh-ccccc
Confidence 0146788889999998 6664 478999999999999999999875 222 33332211110 00 01237
Q ss_pred EEEcccccccCCc-ceEEEeC-H-HHHHHHHhhC----CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 304 IMMGTFTKSFGSC-GGYIAGS-K-ELIQYLKYTC----PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 304 i~~~t~sK~~g~~-GG~i~~~-~-~~~~~l~~~~----~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
+++.|+||++|.+ ||+++++ + ++++.+.... ....++ ..+...++++..+|+.+ ..++.+++..+
T Consensus 259 ~~~~s~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~ 330 (467)
T 1ax4_A 259 ALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYG-GLAGRDMAAMVQGLEEG-------TEEEYLHYRIG 330 (467)
T ss_dssp EEEEETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTT-TCCHHHHHHHHHHHHHT-------TCHHHHHHHHH
T ss_pred eEEEeccccCCCCcceEEEeCCHHHHHHHHHhhccccccccccC-CccchHHHHHHHHHHHh-------hhhhHHHHHHH
Confidence 8888999999887 7888887 6 8887765432 111222 12333333333356543 12345555667
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCeEEEE-------eCC-CCcHHHHHHHH-hhCCceEEeec-C--CC-------cCCCC
Q 046230 377 NSNFFRSELQKMGFEVLGDNDSPVMPIM-------LYN-PAKIPAFSREC-LRQNVAVVTVA-F--PA-------TPLLL 437 (489)
Q Consensus 377 ~~~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~-~~~~~~~~~~l-~~~Gi~v~~~~-~--p~-------~~~~~ 437 (489)
+.+++.+.|++.++++..+.++..+++. +.. .....++.++| .++||.+.+.+ + .. .+...
T Consensus 331 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~ 410 (467)
T 1ax4_A 331 QVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADM 410 (467)
T ss_dssp HHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSC
T ss_pred HHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccccccccccccccc
Confidence 8899999998888887766777777776 221 12456899999 77899998722 1 10 01124
Q ss_pred CeEEEeec-CCCCHHHHHHHHHHHHHHHHHhC
Q 046230 438 ARARICIS-ASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 438 ~~iRi~~~-~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+++||+++ ..+|++|+++++++|+++++++.
T Consensus 411 ~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 411 EFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp CEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 79999998 45999999999999999988753
No 151
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=1.7e-26 Score=232.04 Aligned_cols=314 Identities=16% Similarity=0.119 Sum_probs=227.4
Q ss_pred CCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh---cCCCCEEE
Q 046230 113 FAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL---MRKGSLII 189 (489)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al---~~~g~~Vl 189 (489)
.+..+|.+.+++.+++.+. ... ..+...++++.++++++.+..+++++|++++..++.++ .++|+.|+
T Consensus 8 ~~~~~~~v~~a~~~~~~~~-~~~--------~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSK-QLT--------QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSS-CCS--------SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCCCHHHHHHHHHHHHcC-ccc--------CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 3444788999998888652 111 13456899999999999987777788899998888888 78999999
Q ss_pred EcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHH
Q 046230 190 SDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264 (489)
Q Consensus 190 ~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~ 264 (489)
++.+.|+++...+...|++++.++.+ |+++|++.+.+ +.++++++.+ +|.+.++++|.+
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~------------~~~~v~~~~~----tG~~~~l~~i~~ 142 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINE------------RTKAIVSVDY----AGKSVEVESVQK 142 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT------------TEEEEEEECG----GGCCCCHHHHHH
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc------------CceEEEEeCC----cCCccCHHHHHH
Confidence 99999999999999999999888764 67777776643 2344444433 788999999999
Q ss_pred HHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCCcc-eEEEe-C-HHHHHHHHhhCCCc--
Q 046230 265 ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGSCG-GYIAG-S-KELIQYLKYTCPAH-- 337 (489)
Q Consensus 265 l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~~G-G~i~~-~-~~~~~~l~~~~~~~-- 337 (489)
+|++||+++|+||+|+.|... .+. .++..+ |+.+.||| |++|+ | |+++. + +++++.+.......
T Consensus 143 l~~~~~~~li~D~a~~~~~~~-~~~----~~~~~~---~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (375)
T 2fnu_A 143 LCKKHSLSFLSDSSHALGSEY-QNK----KVGGFA---LASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGML 213 (375)
T ss_dssp HHHHHTCEEEEECTTCTTCEE-TTE----ETTSSS---SEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEE
T ss_pred HHHHcCCEEEEECccccCCeE-CCe----eccccC---CeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCc
Confidence 999999999999999965432 111 122112 56767888 99987 6 66655 4 77887776543211
Q ss_pred ------------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC-----CCCC
Q 046230 338 ------------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD-----NDSP 399 (489)
Q Consensus 338 ------------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~-----~~~~ 399 (489)
.+...++++.++++...++ ..++..++.+++.+++.+.|+++ |+.+..+ ....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 284 (375)
T 2fnu_A 214 KKDFFEGEVKSIGHNFRLNEIQSALGLSQLK---------KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNH 284 (375)
T ss_dssp ESSSSCEEESSCCCBCCCCHHHHHHHHHHHT---------THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCS
T ss_pred cccccccccccccccCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceE
Confidence 1112467777766665544 34678889999999999999998 7776543 1233
Q ss_pred eEEEEeCCC-C-cHHHHHHHHhhCCceEEeecCCCc--------------C----CCCCeEEEeecCCCCHHHHHHHHHH
Q 046230 400 VMPIMLYNP-A-KIPAFSRECLRQNVAVVTVAFPAT--------------P----LLLARARICISASHTKEDLIKALEV 459 (489)
Q Consensus 400 ~~~~~~~~~-~-~~~~~~~~l~~~Gi~v~~~~~p~~--------------~----~~~~~iRi~~~~~~t~edid~~l~~ 459 (489)
++++.+... . ...++.+.|.++||.+.....|.. | ...+.+||+++..+|++|+++++++
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~ 364 (375)
T 2fnu_A 285 LYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHS 364 (375)
T ss_dssp CEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred EEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHH
Confidence 445655432 2 567899999999999883221210 0 0126799999888999999999999
Q ss_pred HHHHHHHhCC
Q 046230 460 ISRVGDLVGI 469 (489)
Q Consensus 460 l~~~~~~~~~ 469 (489)
|+++++++++
T Consensus 365 l~~~~~~~~~ 374 (375)
T 2fnu_A 365 VLKTFESFKI 374 (375)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhcC
Confidence 9999887654
No 152
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=2.2e-26 Score=233.05 Aligned_cols=319 Identities=16% Similarity=0.184 Sum_probs=230.2
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhh
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPV 180 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~a 180 (489)
.++++. ++.+.-++.+.+++.+.+...... +..+...++++.+|++++.++.+++++|++++..++.+
T Consensus 23 ~~~~l~----~~~p~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~ 90 (391)
T 3dr4_A 23 DLPRIS----VAAPRLDGNERDYVLECMDTTWIS--------SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVA 90 (391)
T ss_dssp -----C----CCCCCCCSSHHHHHHHHHHHTCCS--------SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHH
T ss_pred CCceec----cCCCCCCHHHHHHHHHHHHcCCcc--------CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHH
Confidence 345544 444444678888888888762111 23566789999999999999899999999999888888
Q ss_pred h-cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 181 L-MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 181 l-~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+ .++|+.|+++.+.|.++...++..|++++.++.+ |+++|++.+++ ++.+|++ .+++
T Consensus 91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-------------~~~~v~~---~n~t 154 (391)
T 3dr4_A 91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITP-------------RTKAIMP---VHLY 154 (391)
T ss_dssp HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT-------------TEEEECC---BCGG
T ss_pred cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCC-------------CceEEEE---ECCC
Confidence 8 8999999999999999999999999999998765 77888876643 3344443 3578
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCC-cceEEEeC-HHHHHH
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGS-CGGYIAGS-KELIQY 329 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~-~GG~i~~~-~~~~~~ 329 (489)
|.+.++++|.++|++||++||+||+|+.|... .+. ..+.-+ |+.+.||+ |++++ .||+++.+ +++++.
T Consensus 155 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~~~---di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~ 226 (391)
T 3dr4_A 155 GQICDMDPILEVARRHNLLVIEDAAEAVGATY-RGK----KSGSLG---DCATFSFFGNAIITTGEGGMITTNDDDLAAK 226 (391)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE-TTE----ETTSSS---SEEEEECBTTSSSCCBSCEEEEESCHHHHHH
T ss_pred CChhhHHHHHHHHHHcCCEEEEECcccccceE-CCe----eecccC---CEEEEECCCCCcCCcCCeEEEEECCHHHHHH
Confidence 99999999999999999999999999965431 111 122212 66666766 99975 23887765 557666
Q ss_pred HHhhCC-Cc-----------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC--
Q 046230 330 LKYTCP-AH-----------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD-- 395 (489)
Q Consensus 330 l~~~~~-~~-----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~-- 395 (489)
+..... +. .+...++++.+++++..++. .++..++.+++.+++++.|+++|+.+...
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~---------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 297 (391)
T 3dr4_A 227 MRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLER---------VDEHLAARERVVGWYEQKLARLGNRVTKPHV 297 (391)
T ss_dssp HHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHT---------HHHHHHHHHHHHHHHHHHHGGGTTSEECCCC
T ss_pred HHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhhcCCccccCcCC
Confidence 543221 10 01134777777777766653 46788888999999999999888776544
Q ss_pred -----CCCCeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCCc--C---------------CCCCeEEEeecCCCCHH
Q 046230 396 -----NDSPVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPAT--P---------------LLLARARICISASHTKE 451 (489)
Q Consensus 396 -----~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~--~---------------~~~~~iRi~~~~~~t~e 451 (489)
....++++.+.. .....++.+.|.++||.+.+...|.. | .....+|+++...+|++
T Consensus 298 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~e 377 (391)
T 3dr4_A 298 ALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEA 377 (391)
T ss_dssp CTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHH
T ss_pred CCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHH
Confidence 122346777765 45678899999999999996432211 0 01357999999999999
Q ss_pred HHHHHHHHHHHHH
Q 046230 452 DLIKALEVISRVG 464 (489)
Q Consensus 452 did~~l~~l~~~~ 464 (489)
||++++++|++++
T Consensus 378 di~~~~~~l~~~l 390 (391)
T 3dr4_A 378 DIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998653
No 153
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.95 E-value=2.4e-26 Score=232.43 Aligned_cols=310 Identities=14% Similarity=0.104 Sum_probs=227.6
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNH 195 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h 195 (489)
.|++.+++.+++++... .+...+...++++.+|++++.++.+++++|++++..++.++ .++|+.|+++.+.|
T Consensus 16 ~~~~~~a~~~~l~~~~~-------~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~ 88 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQW-------WRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTF 88 (388)
T ss_dssp CHHHHHHHHHHHHTSCC-------BTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHcCCe-------eecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence 37788888888876211 11234567899999999999999999999999998888888 78999999999999
Q ss_pred hHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc
Q 046230 196 NSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY 269 (489)
Q Consensus 196 ~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~ 269 (489)
.++...++..|++++.++.+ |+++|+++++. ++.+|+ +.+++|.+.++++|.++|++|
T Consensus 89 ~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-------------~~~~v~---~~n~tG~~~~l~~i~~la~~~ 152 (388)
T 1b9h_A 89 ISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-------------RTKVIM---PVHMAGLMADMDALAKISADT 152 (388)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-------------TEEEEC---CBCGGGCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-------------CceEEE---EeCCccCcCCHHHHHHHHHHc
Confidence 99999999999999988753 67888877743 334444 567789999999999999999
Q ss_pred CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCC-cceEEEeCHH-H--HHHHHhhCC-C------
Q 046230 270 KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGS-CGGYIAGSKE-L--IQYLKYTCP-A------ 336 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~-~GG~i~~~~~-~--~~~l~~~~~-~------ 336 (489)
|++||+||+|+.|.. ..|.... .+ + |+.+.||| |++++ .||+++++++ + ++.+..... +
T Consensus 153 ~~~li~D~a~~~g~~-~~~~~~~-~~---~---~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (388)
T 1b9h_A 153 GVPLLQDAAHAHGAR-WQGKRVG-EL---D---SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDR 224 (388)
T ss_dssp TCCBCEECTTCTTCE-ETTEEGG-GS---S---SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCS
T ss_pred CCEEEEecchhcCCc-cCCeecc-cc---c---ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCc
Confidence 999999999996532 2333211 11 1 56666887 77743 3499998875 6 566543221 0
Q ss_pred -c---c--cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC------CCCCeEEE
Q 046230 337 -H---L--YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD------NDSPVMPI 403 (489)
Q Consensus 337 -~---~--~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~------~~~~~~~~ 403 (489)
+ . +...++++.++++...++.+ ++.+++.+++.+++.+.|+++ |+.+... ..++++++
T Consensus 225 ~~~~~~~g~~~~~~~~~~a~~~~~~~~l---------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (388)
T 1b9h_A 225 RYFHKIAGSNMRLNEFSASVLRAQLARL---------DEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMF 295 (388)
T ss_dssp SCCCCSCCCBCBCBHHHHHHHHHHHTTH---------HHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEE
T ss_pred cceeecccccCCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEE
Confidence 0 0 11136777777666666543 567888889999999999988 7877642 33567777
Q ss_pred EeCCC--CcHHHHHHHHhhCCceEEeecCCCc--C--------C----------------CCCeEEEeecCCC-CHHHHH
Q 046230 404 MLYNP--AKIPAFSRECLRQNVAVVTVAFPAT--P--------L----------------LLARARICISASH-TKEDLI 454 (489)
Q Consensus 404 ~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~--~--------~----------------~~~~iRi~~~~~~-t~edid 454 (489)
.+... ....++.+.|.++||.+.+...|.. + . ..+.+||++...+ |++|++
T Consensus 296 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~ 375 (388)
T 1b9h_A 296 RIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELH 375 (388)
T ss_dssp ECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHH
T ss_pred EeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHH
Confidence 77543 1467899999999999986433310 0 0 0136999998889 999999
Q ss_pred HHHHHHHHHHHH
Q 046230 455 KALEVISRVGDL 466 (489)
Q Consensus 455 ~~l~~l~~~~~~ 466 (489)
+++++|++++++
T Consensus 376 ~~~~~l~~~~~~ 387 (388)
T 1b9h_A 376 ATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 154
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.95 E-value=4.3e-27 Score=240.91 Aligned_cols=342 Identities=12% Similarity=0.028 Sum_probs=233.4
Q ss_pred eEecccccccC---CCCCCccchHHHHHHHH-HhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeCccHHH-H-
Q 046230 102 CLNLGSYNYLG---FAASDEYCTPRVIESLK-KYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFGMGYVT-N- 174 (489)
Q Consensus 102 ~id~~s~~~lg---~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~~a-~- 174 (489)
.|||+.+.+ . ++ .++.+.+++.+++. ..+... ..|+......+|++.+|++++.+ +.|++++|++. +
T Consensus 34 ~i~l~~g~~-~~~~~~-~~~~~~~a~~~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~ 107 (422)
T 3d6k_A 34 SLDLTRGKP-SAEQLD-LSNDLLSLPGGDFRTKDGVDC----RNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIM 107 (422)
T ss_dssp CEECCCCSC-CHHHHH-TTGGGGGCSTTCCBCTTCCBT----TSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHH
T ss_pred eEeCCCCCC-ChhhCC-CcHHHHHHHHHHHhhccchhh----hCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHH
Confidence 688874433 1 22 13466666654421 111111 11222233489999999999865 67777777664 4
Q ss_pred -HHhHhhhcCC------------CCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHhcCCCCCCC
Q 046230 175 -SAILPVLMRK------------GSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTHR 237 (489)
Q Consensus 175 -~~~~~al~~~------------g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~~g~~~~~~ 237 (489)
..++.++..+ ++.|+++.|+|..+...++..|++++.++.+ |+++|++.+++.
T Consensus 108 l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~---------- 177 (422)
T 3d6k_A 108 FDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKDP---------- 177 (422)
T ss_dssp HHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHTST----------
T ss_pred HHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhcC----------
Confidence 3555666554 3479999999999999999999999888763 788888887531
Q ss_pred CCccEEEEEcCcCCCCCCCCChH---HHHHHHH-HcCcEEEEEcccccccccCCCCccccccC----CCCCCccEEEccc
Q 046230 238 PWKKIMVIVEGIYSMEGELCKFP---EIIAICK-KYKAYIYLDEAHSIGAVGKTGRGVCELLE----VDTADVDIMMGTF 309 (489)
Q Consensus 238 ~~~~~~vive~v~s~~G~~~~l~---~i~~l~~-~~~~~li~DEa~s~g~~g~~G~~~~~~~~----v~p~~~Di~~~t~ 309 (489)
..++++++..+++++|.+.+.+ +|+++|+ +||+++|+||+|+.+.++.+|........ .+..+.+|+++||
T Consensus 178 -~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 256 (422)
T 3d6k_A 178 -QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSST 256 (422)
T ss_dssp -TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEES
T ss_pred -CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcCh
Confidence 2344444678899999998855 8888888 99999999999985456555532222211 1223447899999
Q ss_pred ccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHH
Q 046230 310 TKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386 (489)
Q Consensus 310 sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (489)
||+ +.+| ||+++++++++.+......+.+ +.+++.++++.++|+... ....+.++.++.++++.+++.+.|+
T Consensus 257 SK~-~~~GlriG~~~~~~~l~~~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~ 331 (422)
T 3d6k_A 257 SKI-THAGSGVSFFASSKENIEWYASHANVRGI--GPNKLNQLAHAQFFGDVA--GLKAHMLKHAASLAPKFERVLEILD 331 (422)
T ss_dssp TTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCS--CCCHHHHHHHHHHHCSHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh-cCcccceEEEEeCHHHHHHHHHHHHhhcC--CCCHHHHHHHHHHHhCcc--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 5447 9999999999988765543333 378888888877765210 0001345566777777777777776
Q ss_pred h----CC-CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec--CCCcC-CCCCeEEEeecCCCCHHHHHHHHH
Q 046230 387 K----MG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA--FPATP-LLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 387 ~----~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~p~~~-~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
+ +| +.+..+.+++++++.+... ....+.+.|.++||.+.+.+ |+..+ ...+++||+++. .++++++++++
T Consensus 332 ~~l~~~~~~~~~~p~~g~~~~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~ 409 (422)
T 3d6k_A 332 SRLSEYGVAKWTSPTGGYFISVDVVPG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMD 409 (422)
T ss_dssp HHHGGGTCEEECCCSBSSCEEEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHH
T ss_pred HhcCcCCceEEeCCCcceEEEEECCCC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHH
Confidence 5 34 5555566677888887644 46678888999999999732 32111 235799999976 89999999999
Q ss_pred HHHHHHHHh
Q 046230 459 VISRVGDLV 467 (489)
Q Consensus 459 ~l~~~~~~~ 467 (489)
+|+++++++
T Consensus 410 ~l~~~l~~~ 418 (422)
T 3d6k_A 410 GFATCVLMA 418 (422)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
No 155
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=240.42 Aligned_cols=335 Identities=14% Similarity=0.113 Sum_probs=224.1
Q ss_pred CccchHHHHHHHHHhCC-CCCCcccCCCcchhHHHHHHHHHHHh-CC---CCEEEeCcc-HHHHHHhHhhhcCCCC----
Q 046230 117 DEYCTPRVIESLKKYSP-STCSSRVDGGTLMVHNELEECVARFV-GK---PAAIVFGMG-YVTNSAILPVLMRKGS---- 186 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~-g~---~~~i~~~sG-~~a~~~~~~al~~~g~---- 186 (489)
+..+.+++.+++++.+. +...+....|..++.+++++.+.+.. |. ++.+++++| ++++..++.++..+|+
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d 182 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRT 182 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSE
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCC
Confidence 45666888888887542 22333334455333444444444333 33 355666555 5556888888888865
Q ss_pred EEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC-
Q 046230 187 LIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK- 258 (489)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~- 258 (489)
.|+++.++|..+...++..|+.++.++++ |+++|++.+++.... .++.+|++.+.+|++|.+.+
T Consensus 183 ~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~--------~~~k~i~l~np~NPTG~v~s~ 254 (498)
T 3ihj_A 183 GVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH--------CDPKVLCIINPGNPTGQVQSR 254 (498)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT--------SEEEEEEEESSCTTTCCCCCH
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc--------CCCeEEEEECCCCCCCCcCCH
Confidence 99999999999999999999999998876 889999999874110 02334444488999998865
Q ss_pred --hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC----CC---CC-ccEEEccccccc-CCcc---eEEE---
Q 046230 259 --FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV----DT---AD-VDIMMGTFTKSF-GSCG---GYIA--- 321 (489)
Q Consensus 259 --l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v----~p---~~-~Di~~~t~sK~~-g~~G---G~i~--- 321 (489)
+++|+++|++||++||+||+|....++..... .....+ .+ ++ ..|+++||||++ |.+| ||++
T Consensus 255 ~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~ 333 (498)
T 3ihj_A 255 KCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRF-HSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVIN 333 (498)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC-CCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEES
T ss_pred HHHHHHHHHHHHcCcEEEEEcCccccccCCCCCc-CCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEec
Confidence 78899999999999999999994444321111 111111 00 11 137889999999 6567 9998
Q ss_pred eCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHH-----------HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-C
Q 046230 322 GSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK-----------VILGEDGSSRGAQKLARIRENSNFFRSELQKM-G 389 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~-----------~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 389 (489)
+++++++.+...... ..+.+.+.++++.++++ .+. +.++.+++++++.+++.+.|+++ |
T Consensus 334 ~~~~l~~~l~~~~~~---~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~------~~~~~~~~l~~~~~~l~~~L~~~~g 404 (498)
T 3ihj_A 334 LHPEIKGQLVKLLSV---RLCPPVSGQAAMDIVVNPPVAGEESFEQFSR------EKESVLGNLAKKAKLTEDLFNQVPG 404 (498)
T ss_dssp CCHHHHHHHHHHHHH---SCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH------HHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CCHHHHHHHHHHHhc---cCCCCHHHHHHHHHHhcCCccCcccHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 689999888765321 12245555555555442 111 34567788999999999999998 8
Q ss_pred CeeeCCCCCCeEEEEeCCCC-----------cHHHH-H-HHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHH
Q 046230 390 FEVLGDNDSPVMPIMLYNPA-----------KIPAF-S-RECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKA 456 (489)
Q Consensus 390 ~~v~~~~~~~~~~~~~~~~~-----------~~~~~-~-~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~ 456 (489)
+.+..+.++.++++.+..+. ...++ + +.|.++||.+.+...+..+.+.+++|+++ .+++++++++
T Consensus 405 ~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~~~~e~l~~~ 482 (498)
T 3ihj_A 405 IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI--LPPVEKLKTV 482 (498)
T ss_dssp EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--CSCHHHHHHH
T ss_pred cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe--CCCHHHHHHH
Confidence 88877766766665554332 22333 4 44556799999855444445678999999 4899999999
Q ss_pred HHHHHHHHHHhCCcc
Q 046230 457 LEVISRVGDLVGIKY 471 (489)
Q Consensus 457 l~~l~~~~~~~~~~~ 471 (489)
+++|.++++++..++
T Consensus 483 i~~L~~~~~~~~~~~ 497 (498)
T 3ihj_A 483 LQKVKDFHINFLEKY 497 (498)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998775443
No 156
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.95 E-value=4.7e-27 Score=238.16 Aligned_cols=328 Identities=13% Similarity=0.053 Sum_probs=224.5
Q ss_pred cceeEecccccccCCC---CCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh---C-----CCCEEE-
Q 046230 99 VNRCLNLGSYNYLGFA---ASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV---G-----KPAAIV- 166 (489)
Q Consensus 99 g~~~id~~s~~~lg~~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g-----~~~~i~- 166 (489)
++++|||+++.|++.. +.+|.+.+++.+++++.. .. .++......++++.+++++ + .++.++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~----~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~ 98 (396)
T 2q7w_A 25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET--TK----NYLGIDGIPEFGRCTQELLFGKGSALINDKRARTA 98 (396)
T ss_dssp ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCC--CC----CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred CCCceecccccccCCCCCccCcHHHHHHHHhhcCccc--cc----CCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEE
Confidence 5679999988765442 235788999888876531 11 1122333488999999987 2 234444
Q ss_pred -eCccHHHHHHhHhhh--cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHHHHhcCCCCCC
Q 046230 167 -FGMGYVTNSAILPVL--MRKGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 167 -~~sG~~a~~~~~~al--~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~Le~~l~~~~~~g~~~~~ 236 (489)
+++|++++..++.++ ..+|+.|+++.++|+++...++..|++++.++. + |+++|++.+++.
T Consensus 99 ~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--------- 169 (396)
T 2q7w_A 99 QTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA--------- 169 (396)
T ss_dssp EESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC---------
T ss_pred ecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC---------
Confidence 566677777666655 368999999999999999999999999998887 4 788998888641
Q ss_pred CCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC--Cc-cccccCCCCCCccEEEcccc
Q 046230 237 RPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG--RG-VCELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G--~~-~~~~~~v~p~~~Di~~~t~s 310 (489)
+.++.++++...++++|.+.+ +++|+++|++||+++|+||+|+ .++.+| .. ....++..+ +.+++++|||
T Consensus 170 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~s 245 (396)
T 2q7w_A 170 -QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ--GFARGLEEDAEGLRAFAAMH-KELIVASSYS 245 (396)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT--TSSSCHHHHTHHHHHHHHHC-SCEEEEEECT
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc--cccCCccchhHHHHHHHhcC-CcEEEEEecc
Confidence 113567778889999998865 6789999999999999999999 666653 21 122122111 2368899999
Q ss_pred cccCCcc---eEEEe---CH----HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH-ccCCCchHHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG---SK----ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVIL-GEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 311 K~~g~~G---G~i~~---~~----~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~ 379 (489)
|++|++| ||+++ ++ ++++.+...... .++ +.+++.++++.++|+... .+......++.+++++++.+
T Consensus 246 K~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (396)
T 2q7w_A 246 XNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRA-NYS-NPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQ 323 (396)
T ss_dssp TTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHT-TTS-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHH
T ss_pred ccccccccccceEEEEcCCHHHHHHHHHHHHHHHhh-ccC-CCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999778 99986 55 455555432211 122 258888888888775320 00000145667788899999
Q ss_pred HHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHH
Q 046230 380 FFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIK 455 (489)
Q Consensus 380 ~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~ 455 (489)
++.+.|++++ +.+..+.++.++++.+ ....+.+.|.++||.+.+ .+||+++. .|++++++
T Consensus 324 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gv~v~~-----------~~Ris~~~-~~~e~i~~ 387 (396)
T 2q7w_A 324 LFVNTLQEKGANRDFSFIIKQNGMFSFSGL----TKEQVLRLREEFGVYAVA-----------SGRVNVAG-MTPDNMAP 387 (396)
T ss_dssp HHHHHHHHTTCCSCCTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT-----------TCEEEGGG-CCTTTHHH
T ss_pred HHHHHHHhcCCCCCcceecCCCceEEEecC----CHHHHHHHHHhcCeeecC-----------CceEEEee-cCHHHHHH
Confidence 9999999986 6655445565533322 234566666678999872 27999974 49999999
Q ss_pred HHHHHHHH
Q 046230 456 ALEVISRV 463 (489)
Q Consensus 456 ~l~~l~~~ 463 (489)
++++|+++
T Consensus 388 ~~~~l~~~ 395 (396)
T 2q7w_A 388 LCEAIVAV 395 (396)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
No 157
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=6.4e-26 Score=229.35 Aligned_cols=283 Identities=11% Similarity=0.131 Sum_probs=215.0
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
.+...+++++++++++.++.+++++|++++..++.++.++|+.|+++.+.|+++...+ +..|+++..++.+|+++|
T Consensus 51 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l 130 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQAL 130 (386)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHH
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHH
Confidence 4566899999999999989999999999998888888899999999999999865543 566899999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+++ ++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.+.+ . .. ...
T Consensus 131 ~~~i~~-------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~--~-~~----~~~--- 187 (386)
T 1cs1_A 131 RAALAE-------------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPAL--Q-NP----LAL--- 187 (386)
T ss_dssp HHHHHT-------------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT--C-CG----GGG---
T ss_pred HHhhcc-------------CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc--C-Cc----ccc---
Confidence 998864 345677889999999999999999999999999999999994432 1 11 122
Q ss_pred CccEEEcccccccCCcc----eEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
++|+++.|++|+++++| |++++++ ++++.+...... ++.+.++..++++.++++.+ +.+.+++.
T Consensus 188 ~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~ 256 (386)
T 1cs1_A 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN--IGVTGGAFDSYLLLRGLRTL---------VPRMELAQ 256 (386)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH--HTCBCCHHHHHHHHHHHTTH---------HHHHHHHH
T ss_pred CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhcccHH---------HHHHHHHH
Confidence 24899999999997654 8898875 888888765433 23448888888777776643 55677788
Q ss_pred HHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCC------
Q 046230 376 ENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP------ 431 (489)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p------ 431 (489)
++.+.+.+.|++++ +. + .. ...++++.+.+... ...+.+.|.++||.+....+.
T Consensus 257 ~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~~~~~~g~~~sl~ 334 (386)
T 1cs1_A 257 RNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLGGLSLFTLAESLGGVESLI 334 (386)
T ss_dssp HHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--HHHHHHHHHTCSSSEEBSCCCSSSCEE
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--HHHHHHHHHhCCcceEcccCCCcceee
Confidence 88888888888763 21 1 11 12367777776533 567788888889988742111
Q ss_pred ---C------c--------CCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 432 ---A------T--------PLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 432 ---~------~--------~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
. . ....+++||+++...++++++.+.++|+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 335 SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 0 0 122589999999888888888887777654
No 158
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.95 E-value=1.7e-25 Score=227.68 Aligned_cols=311 Identities=14% Similarity=0.121 Sum_probs=225.0
Q ss_pred CccchHHHHHHHHHhCCCCCCc-ccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSS-RVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNH 195 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h 195 (489)
++.+.+++.+.++.+....... +.. ...+...++++.+|+++|.++.+++++|++++..++.++.++||.|+++.+.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y 111 (404)
T 1e5e_A 33 STFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTILKAGDHLISDECLY 111 (404)
T ss_dssp SBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCC
T ss_pred CccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 4556667666665332211111 111 22456679999999999999899999999888888998899999999999999
Q ss_pred hHHHH----HHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH-cC
Q 046230 196 NSIVN----GARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK-YK 270 (489)
Q Consensus 196 ~~~~~----~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~-~~ 270 (489)
+++.. .++..|++++.++.+|+++|++.+++ ++.+|++++++|++|.+.++++|.++|++ +|
T Consensus 112 ~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-------------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~ 178 (404)
T 1e5e_A 112 GCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKP-------------NTKIVYFETPANPTLKIIDMERVCKDAHSQEG 178 (404)
T ss_dssp HHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTT
T ss_pred hhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-------------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcC
Confidence 99887 67888999999999999999987753 45577789999999999999999999999 99
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc----ceEEEeCHHHHH-HHHhhCCCcccccCCCH
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC----GGYIAGSKELIQ-YLKYTCPAHLYATSISP 345 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~----GG~i~~~~~~~~-~l~~~~~~~~~~~~~~p 345 (489)
+++|+||+|+.+.+. ... .. +.|+++.|+||+|+++ ||++++++++++ .+......+ ++...++
T Consensus 179 ~~li~De~~~~~~~~---~~~----~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~-~g~~~~~ 247 (404)
T 1e5e_A 179 VLVIADNTFCSPMIT---NPV----DF---GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDI-TGSVISP 247 (404)
T ss_dssp CEEEEECTTTCTTTC---CGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCC-CCCCCCH
T ss_pred CEEEEECCCchhhhC---Ccc----cc---CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhC-CCCCCCH
Confidence 999999999944321 111 12 3489999999999876 499999999888 787655432 1445889
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCC
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYN 407 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~ 407 (489)
..++++.++|+. .+.+.++..++.+.+.+.|++.. +. + .. ...+.++.+.+..
T Consensus 248 ~~~~~~~~~l~~---------~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 318 (404)
T 1e5e_A 248 HDAWLITRGLST---------LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS 318 (404)
T ss_dssp HHHHHHHHHHTT---------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred HHHHHHHHhHhH---------HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC
Confidence 888888888763 35566777778888878777653 11 1 00 1125566665542
Q ss_pred CCcHHHHHHHHhhCCceEEeecCC---------CcC------------CC--CCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 408 PAKIPAFSRECLRQNVAVVTVAFP---------ATP------------LL--LARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~p---------~~~------------~~--~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
....+.+.+.+.||.+....+. +.+ .+ .+.+||+++. |+++++++.|++++
T Consensus 319 --~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al 392 (404)
T 1e5e_A 319 --GFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGL 392 (404)
T ss_dssp --HHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHH
Confidence 2234555556669855543221 110 12 5799999964 88999999999988
Q ss_pred HHh
Q 046230 465 DLV 467 (489)
Q Consensus 465 ~~~ 467 (489)
+.+
T Consensus 393 ~~~ 395 (404)
T 1e5e_A 393 DAL 395 (404)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 159
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.95 E-value=9.7e-27 Score=237.15 Aligned_cols=323 Identities=15% Similarity=0.088 Sum_probs=226.2
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh-CCC------CEE---EeCc
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV-GKP------AAI---VFGM 169 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~------~~i---~~~s 169 (489)
..+|||++++|+++... |.+.+++.++.. .....+ +......++++.+++++ +.+ +.+ .+.+
T Consensus 41 ~~~i~l~~g~~~d~~~~-~~v~~a~~~a~~---~~~~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~ 112 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQ-PFVLECVKQATL---GTNMDY----APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLG 112 (409)
T ss_dssp SSCEECCCSSCCCTTSC-CCCCHHHHTCCC---CSCCCC----CCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESH
T ss_pred cCceeeeeeEEECCCCC-EeecHHHHhcCc---cccccC----CCCCCcHHHHHHHHHHHcCCCchhhccCceeeeeccc
Confidence 56899999998888754 678888887721 111111 12223378999999986 532 333 3566
Q ss_pred cHHHHH---HhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 170 GYVTNS---AILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 170 G~~a~~---~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
|++++. .++.++.++||.|+++.++|.++...++..|++++.++.+ |+++|++.+++. +.
T Consensus 113 g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~ 182 (409)
T 4eu1_A 113 GTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKA----------PE 182 (409)
T ss_dssp HHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHS----------CT
T ss_pred chHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhC----------CC
Confidence 666663 3466677899999999999999999999999999998762 789999988752 13
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC-----CccccccCCCCCCccEEEccccc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG-----RGVCELLEVDTADVDIMMGTFTK 311 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G-----~~~~~~~~v~p~~~Di~~~t~sK 311 (489)
+++++++...+|++|.+.+ +++|+++|++||+++|+||+|+ .++..+ .......+..+ ..|+++||||
T Consensus 183 ~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~~~~--~~i~~~S~SK 258 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ--GFATGQLDYDAFVPRHLVDMVP--NLIVAQSFSK 258 (409)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT--TTTTSCHHHHTHHHHHHHTTSS--CCEEEEECTT
T ss_pred CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc--ccccCCcccchHHHHHHHhhCC--cEEEEecCcc
Confidence 5667777888999999877 6679999999999999999999 666655 12222333322 2588899999
Q ss_pred ccCCcc---eEE---EeCHH----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH--ccCCCchHHHHHHHHHHHHH
Q 046230 312 SFGSCG---GYI---AGSKE----LIQYLKYTCPAHLYATSISPPAAEQIISAIKVIL--GEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 312 ~~g~~G---G~i---~~~~~----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~--~~~~~~~~~~~~~~~~~~~~ 379 (489)
++|.+| ||+ +++++ +++.+........ .+.+++.++++.++|+... .+ .....++.+++++++.+
T Consensus 259 ~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~ 335 (409)
T 4eu1_A 259 NFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY--NNPPLYGAWVVSSILKDPQLTAL-WKKELKQMSSRIAEVRK 335 (409)
T ss_dssp TSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH--SSCCHHHHHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred cccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc--CCCChHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999889 995 56777 6565554332222 2356777777777776210 00 00135678889999999
Q ss_pred HHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhh-CCceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 380 FFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLR-QNVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 380 ~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
++.+.|+++| +.+..+.++.++++ .. . .++...+++ +||.+.+ ..||+++ .+++++++
T Consensus 336 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~ll~~~gv~v~p-----------~~Ri~~~-~~~~~~i~ 398 (409)
T 4eu1_A 336 RLVSELKACGSVHDWSHIERQVGMMAYT--GL--T-REQVELLRSEYHIYMTL-----------NGRAAVS-GLNSTNVE 398 (409)
T ss_dssp HHHHHHHHTTCCSCCHHHHHSCSSEEEC--CC--C-HHHHHHHHHHHCEECCT-----------TCEEEGG-GCCTTTHH
T ss_pred HHHHHHHhcCCCCCcceecCCceEEEEe--CC--C-HHHHHHHHHcCCEEEcC-----------CCEEEEE-ecCHhhHH
Confidence 9999999987 55555555654432 22 2 345666664 5999883 1488885 57788899
Q ss_pred HHHHHHHHHH
Q 046230 455 KALEVISRVG 464 (489)
Q Consensus 455 ~~l~~l~~~~ 464 (489)
+++++|++++
T Consensus 399 ~~~~~l~~~l 408 (409)
T 4eu1_A 399 YVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 160
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=1.8e-26 Score=228.23 Aligned_cols=278 Identities=16% Similarity=0.174 Sum_probs=210.8
Q ss_pred HHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHHHHHHH
Q 046230 150 ELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHLEEVLR 225 (489)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~Le~~l~ 225 (489)
++++++|+++|.++.+++++|++++..++.++.++|+.|+++.+.|+++...+ ...|++++.++..|++++++.++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999998888888899999999999999987765 34799999999999999988775
Q ss_pred HHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH-cCcEEEEEcccccccccCCCCccccccCCCCCCccE
Q 046230 226 EQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK-YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDI 304 (489)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~-~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di 304 (489)
+ ++.+|+++++++++|.+.++++|.++|++ +|+++|+||+|+.|.+.. . ... ++|+
T Consensus 82 ~-------------~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~---~----~~~---~~d~ 138 (331)
T 1pff_A 82 P-------------NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN---P----LDL---GVDI 138 (331)
T ss_dssp T-------------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC---G----GGG---TCSE
T ss_pred C-------------CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC---h----hhc---CCcE
Confidence 3 45677789999999999999999999999 999999999999654421 1 111 2489
Q ss_pred EEcccccccCCc----ceEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHH
Q 046230 305 MMGTFTKSFGSC----GGYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 305 ~~~t~sK~~g~~----GG~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~ 379 (489)
++.|++|+|+++ +|++++++ ++++.++.....+ ++.+.++..++++.++++.+ +.+.++..++.+
T Consensus 139 ~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~ 208 (331)
T 1pff_A 139 VVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDI-TGAIISPHDAWLITRGTLTL---------DMRVKRAAENAQ 208 (331)
T ss_dssp EEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCC-CCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHH
T ss_pred EEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhh-cCCCCCHHHHHHHHcCcchH---------HHHHHHHHHHHH
Confidence 999999999865 47999998 9999888765541 23358888887777777644 344555556666
Q ss_pred HHHHHHHhC---------------CCeeeC---CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec---------CCC
Q 046230 380 FFRSELQKM---------------GFEVLG---DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA---------FPA 432 (489)
Q Consensus 380 ~l~~~L~~~---------------g~~v~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------~p~ 432 (489)
.+.+.|++. ++.+.. ...++++.+.+. ...++.+.|.++||.+.... +|.
T Consensus 209 ~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~ 285 (331)
T 1pff_A 209 KVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD---GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPA 285 (331)
T ss_dssp HHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS---SHHHHHHHHHTCSSSEECSSCCSSSCEEECHH
T ss_pred HHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC---CHHHHHHHHHhCCCceeccCCCCcceeeecch
Confidence 666666543 111111 124667777664 45678888888899887542 111
Q ss_pred c--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 433 T--------------PLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 433 ~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
. ....+.+|++++..+|++++++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 286 SMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred hhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1 122589999999999999999999998753
No 161
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.95 E-value=1.3e-25 Score=232.10 Aligned_cols=334 Identities=9% Similarity=0.060 Sum_probs=225.5
Q ss_pred cceeEecccc-cccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHh
Q 046230 99 VNRCLNLGSY-NYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAI 177 (489)
Q Consensus 99 g~~~id~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~ 177 (489)
|..|+||.++ +.. .+.+++.+++.. +.. .++..+...+|++++|++++.++.+++++|++++..+
T Consensus 41 ~~~ylD~~~~~~~~-------~~~~~~~~a~~~-~~~------~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~a 106 (456)
T 2ez2_A 41 KDIYIDLLTDSGTN-------AMSDKQWAGMMM-GDE------AYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLL 106 (456)
T ss_dssp GGCSEECSCSSSCC-------CCCHHHHHHHTT-CCC------CSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHH
T ss_pred ccceeeeccccCCc-------cCCHHHHHHhhc-chh------hcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHH
Confidence 6778998633 211 123455555542 211 1233566789999999999999888889999999888
Q ss_pred HhhhcCCCCEEEEcCCCc-hHHHHHHHhcCCeEEEecCC---------------CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 178 LPVLMRKGSLIISDSLNH-NSIVNGARGSGATIRVFQHN---------------TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 178 ~~al~~~g~~Vl~~~~~h-~~~~~~~~~~g~~~~~~~~~---------------d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+.++.++|| +++.++| +++...+...|++++.++.+ |+++|++++.+.. +...
T Consensus 107 l~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t---------~~~~ 175 (456)
T 2ez2_A 107 SQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG---------AENI 175 (456)
T ss_dssp HHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC---------GGGE
T ss_pred HHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcc---------ccce
Confidence 888899999 4556666 88888889999998876432 7899999887630 0123
Q ss_pred EEEEEcCcCC-CCCCCCC---hHHHHHHHHHcCcEEEEEccccccc--------ccCCCCcccc---ccCCCCCCccEEE
Q 046230 242 IMVIVEGIYS-MEGELCK---FPEIIAICKKYKAYIYLDEAHSIGA--------VGKTGRGVCE---LLEVDTADVDIMM 306 (489)
Q Consensus 242 ~~vive~v~s-~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~--------~g~~G~~~~~---~~~v~p~~~Di~~ 306 (489)
.+|++++..+ ++|.+.+ +++|+++|++||++||+||+|+.|. +...|....+ ..+..+ |+++
T Consensus 176 ~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~---d~~~ 252 (456)
T 2ez2_A 176 AYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYA---DGCT 252 (456)
T ss_dssp EEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTC---SEEE
T ss_pred eEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccC---CEEE
Confidence 5666665555 8998876 9999999999999999999999541 4455543211 123223 7776
Q ss_pred cccccccCCc-ceEEEe-CHHHHHHHHhhCC---CcccccCCCHHHHHH-HHHHHHHHHccCCCchHHHHHHHHHHHHHH
Q 046230 307 GTFTKSFGSC-GGYIAG-SKELIQYLKYTCP---AHLYATSISPPAAEQ-IISAIKVILGEDGSSRGAQKLARIRENSNF 380 (489)
Q Consensus 307 ~t~sK~~g~~-GG~i~~-~~~~~~~l~~~~~---~~~~~~~~~p~~~aa-~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.|++|.++.+ ||++++ ++++++.+..... ++....+.++..+++ +.+.++.+ . ++..++..++.++
T Consensus 253 ~S~kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~-------~-~~~~~~~~~~~~~ 324 (456)
T 2ez2_A 253 MSGKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAM-------Q-YEYIEHRVKQVRY 324 (456)
T ss_dssp EETTTTTCCSSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHT-------C-HHHHHHHHHHHHH
T ss_pred EeCcccCCCCceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHh-------H-HHHHHHHHHHHHH
Confidence 6778876643 599988 6888887654221 110011234433333 44444432 1 4667777888899
Q ss_pred HHHHHHhCCCeeeCCCCCCeEEEEeC---CCCc-----HHHHHHHH-hhCCceEEeecC---CC-------cCCCCCeEE
Q 046230 381 FRSELQKMGFEVLGDNDSPVMPIMLY---NPAK-----IPAFSREC-LRQNVAVVTVAF---PA-------TPLLLARAR 441 (489)
Q Consensus 381 l~~~L~~~g~~v~~~~~~~~~~~~~~---~~~~-----~~~~~~~l-~~~Gi~v~~~~~---p~-------~~~~~~~iR 441 (489)
+++.|++.|+++..+.+++++++.+. .... ...+++.| .++||.+.+.+. +. ...+.+++|
T Consensus 325 l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iR 404 (456)
T 2ez2_A 325 LGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVR 404 (456)
T ss_dssp HHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEE
T ss_pred HHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEE
Confidence 99999988887766666777777652 1112 23347777 567998765321 10 012347899
Q ss_pred EeecCC-CCHHHHHHHHHHHHHHHHHhC
Q 046230 442 ICISAS-HTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 442 i~~~~~-~t~edid~~l~~l~~~~~~~~ 468 (489)
|+++.. +|++++++++++|++++++..
T Consensus 405 is~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 405 LTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp EECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 999876 899999999999999987653
No 162
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=1.9e-26 Score=231.96 Aligned_cols=303 Identities=17% Similarity=0.114 Sum_probs=221.4
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
+++.+++.+++.... ++..+...++++.+|++++.++.+++++|++++..++.++ .++||.|+++.++|.
T Consensus 17 ~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~ 87 (373)
T 3frk_A 17 YEIKFKFEEIYKRNW---------FILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFI 87 (373)
T ss_dssp HHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCT
T ss_pred HHHHHHHHHHHHCCC---------ccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 556666666665521 1235677999999999999998999999999998888888 899999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...++..|++++.++.+ |+++|++++++ ++.+|+ +.+++|...++++|.++|++||
T Consensus 88 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-------------~~~~v~---~~n~~G~~~~l~~i~~l~~~~~ 151 (373)
T 3frk_A 88 ATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-------------KTKAII---AVHLYGQPADMDEIKRIAKKYN 151 (373)
T ss_dssp HHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-------------TEEEEE---EECCTTCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-------------CCeEEE---EECCCcCcccHHHHHHHHHHcC
Confidence 9999999999999988765 78888877643 333444 4567899999999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCCc--ceEEEeC-HHHHHHHHhhCCC---------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGSC--GGYIAGS-KELIQYLKYTCPA--------- 336 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~~--GG~i~~~-~~~~~~l~~~~~~--------- 336 (489)
++||+||+|+.|.. ..++ ..+..+ |+++.||+ |++++. ||+++++ +++++.++.....
T Consensus 152 ~~li~D~a~~~g~~-~~~~----~~~~~~---d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 223 (373)
T 3frk_A 152 LKLIEDAAQAHGSL-YKGM----KVGSLG---DAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHI 223 (373)
T ss_dssp CEEEEECTTCTTCE-ETTE----ETTSSS---SEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCC
T ss_pred CEEEEECCcccCCE-ECCE----eccccc---cEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccc
Confidence 99999999996654 3332 222223 88888877 999763 4888876 5576665532211
Q ss_pred -cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC-----CCeEEEEeCCCCc
Q 046230 337 -HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND-----SPVMPIMLYNPAK 410 (489)
Q Consensus 337 -~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~-----~~~~~~~~~~~~~ 410 (489)
..+...++++.++.+...++. .++..++.+++.+++++.|+++++.+..... ...+++... .
T Consensus 224 ~~g~~~~~~~~~aa~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 291 (373)
T 3frk_A 224 YKGFNSRLDELQAGFLRVKLKY---------LDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE---K 291 (373)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHT---------HHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES---S
T ss_pred cccccCCCCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC---C
Confidence 012234688887777776664 3667888899999999999887744322211 122333332 5
Q ss_pred HHHHHHHHhhCCceEEeec-CCCc--C-----------------CCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVA-FPAT--P-----------------LLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~-~p~~--~-----------------~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
..++.+.|.++||.+.+.. .|.. | ...+.+|+++...+|++|+++++++|+++..
T Consensus 292 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 292 RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 6789999999999988532 1110 0 0116899999999999999999999987654
No 163
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=6.1e-26 Score=230.52 Aligned_cols=285 Identities=16% Similarity=0.185 Sum_probs=216.2
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHH
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSH 219 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 219 (489)
..+...++++++++++|.++++++++|++++..++.++.++|+.|+++.+.|+++...+ ...|.++..++.+|+++
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 142 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQA 142 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 46778999999999999999999999999998899988899999999999999987766 56789999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
|++.+++ ++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.+.++. . ...
T Consensus 143 l~~~i~~-------------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~---~----~~~-- 200 (398)
T 1gc0_A 143 LEAAMTP-------------ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR---P----LEL-- 200 (398)
T ss_dssp HHHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC---G----GGG--
T ss_pred HHHhcCC-------------CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC---c----hhh--
Confidence 9887753 45678889999999999999999999999999999999999554421 1 112
Q ss_pred CCccEEEcccccccCCc----ceEEEeCHHHHH-HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSC----GGYIAGSKELIQ-YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~----GG~i~~~~~~~~-~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
++|+++.|++|+++++ ||+++++++.++ .+...... .++.+++|..++++.++++.+ +.+.++.
T Consensus 201 -~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~ 269 (398)
T 1gc0_A 201 -GADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD-MTGAVLSPHDAALLMRGIKTL---------NLRMDRH 269 (398)
T ss_dssp -TCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH-HTCCCCCHHHHHHHHHHHTTH---------HHHHHHH
T ss_pred -CceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc-cCCCCCCHHHHHHHHhccchH---------HHHHHHH
Confidence 2489999999999865 499999988765 45433322 134458898888888887643 5677788
Q ss_pred HHHHHHHHHHHHhCC-C--------------eeeC---CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecC------
Q 046230 375 RENSNFFRSELQKMG-F--------------EVLG---DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAF------ 430 (489)
Q Consensus 375 ~~~~~~l~~~L~~~g-~--------------~v~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------ 430 (489)
.++.+.+.+.|++++ + .+.. ...++++.+.+.. ....+.+.+.+.|+.+....+
T Consensus 270 ~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl 347 (398)
T 1gc0_A 270 CANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESL 347 (398)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCE
T ss_pred HHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCccee
Confidence 888888888888752 1 1111 1246777776642 233455666677888765221
Q ss_pred ---CC------cC--------CCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 431 ---PA------TP--------LLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 431 ---p~------~~--------~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
|. .| ...+.+||+++..+++++++.+.++|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 348 AQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp EECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 11 01 12589999999999999999999988764
No 164
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=5.1e-26 Score=238.86 Aligned_cols=341 Identities=13% Similarity=0.048 Sum_probs=239.9
Q ss_pred EecccccccCCC-CCCccchHHHHHHHHHhCCCCC-CcccCCCcchhHHHHHHHHHHHhCCC----CE--EEeCccHHHH
Q 046230 103 LNLGSYNYLGFA-ASDEYCTPRVIESLKKYSPSTC-SSRVDGGTLMVHNELEECVARFVGKP----AA--IVFGMGYVTN 174 (489)
Q Consensus 103 id~~s~~~lg~~-~~~~~v~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~----~~--i~~~sG~~a~ 174 (489)
+++.+..++|.. +.++.+.+++.+++..+..... .+....+...+..++++.+++++|.+ .. +++++|++++
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~ 173 (514)
T 3mad_A 94 PAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173 (514)
T ss_dssp HHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHH
T ss_pred CCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHH
Confidence 445556667753 2356778888888876432221 11222233455567778889998876 33 6668888888
Q ss_pred HHhHhhhcCCC--------CEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 175 SAILPVLMRKG--------SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 175 ~~~~~al~~~g--------~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
..++.++..++ +.|+++.+.|.++...++..|+.++.++.+ |+++|++++++ ++
T Consensus 174 ~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-------------~~ 240 (514)
T 3mad_A 174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITP-------------NT 240 (514)
T ss_dssp HHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCT-------------TE
T ss_pred HHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhcc-------------CC
Confidence 88888887655 899999999999999999999999999876 88999988754 45
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccc---cCCCCccccccCCCCCCccEEEccccccc-CCcc
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV---GKTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG 317 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~---g~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G 317 (489)
.+|+++++++++|.+.++++|.++|++||++||+||+|+.+.+ +..|.... .++....++|+++.+++|++ ++.|
T Consensus 241 ~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~-~~~~~~~g~d~~~~s~~K~l~~~~~ 319 (514)
T 3mad_A 241 VVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVP-PFDFRLEGVTSVSADTHKYGYGAKG 319 (514)
T ss_dssp EEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCC-CCSTTSTTCCEEEECTTTTTCCCSS
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCC-cccccCCCCcEEEECchhccCCCCC
Confidence 6778889999999999999999999999999999999983322 33343211 22223345689999999995 4444
Q ss_pred -eEEEeCHHHHHHHHhh-CCC--------cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 046230 318 -GYIAGSKELIQYLKYT-CPA--------HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK 387 (489)
Q Consensus 318 -G~i~~~~~~~~~l~~~-~~~--------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (489)
|+++.+++.+...... ... .....+.+....++..++++.+.. ...+++++++.++++++.+.|++
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~----~~~~~~~~~~~~~~~~l~~~L~~ 395 (514)
T 3mad_A 320 TSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGE----EGYLDATRRILQAADRLKAGVRA 395 (514)
T ss_dssp CEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHhh
Confidence 8887776554432110 000 011122344444555556655521 14578899999999999999999
Q ss_pred C-CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeec-CCCCHHHHHHHHHHHHHHHH
Q 046230 388 M-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICIS-ASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 388 ~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~ 465 (489)
+ ++.+..+. ..++++.. ......++.+.|.++||.+....+ .+.+|++++ ...+++++++++++|+++++
T Consensus 396 ~~g~~~~~~~-~~~~~~~~-~~~~~~~l~~~L~~~Gi~v~g~~~------~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 396 IPSLKILGDP-LWVIAVAS-DELNIYQVMEEMAGRGWRLNGLHR------PPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp STTCEESSCC-SSEEEEEC-SSSCHHHHHHHHHTTTCBCEEETT------TTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred CCCeEEeCCC-eEEEEEeC-CCCCHHHHHHHHHhcCCEeccCCC------CCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 8 88877655 34555544 334677899999999998853333 257999987 44567999999999999998
Q ss_pred HhCC
Q 046230 466 LVGI 469 (489)
Q Consensus 466 ~~~~ 469 (489)
++..
T Consensus 468 ~~~~ 471 (514)
T 3mad_A 468 QVRA 471 (514)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7643
No 165
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=1.4e-26 Score=238.42 Aligned_cols=341 Identities=11% Similarity=0.041 Sum_probs=229.9
Q ss_pred ceeE-ecccccccCCCCCCccchHHHHHHHHHhCCC-------C--CCcccCCCcchhHHHHHHHHHHHh------CC--
Q 046230 100 NRCL-NLGSYNYLGFAASDEYCTPRVIESLKKYSPS-------T--CSSRVDGGTLMVHNELEECVARFV------GK-- 161 (489)
Q Consensus 100 ~~~i-d~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~-------~--~~~~~~~g~~~~~~~l~~~la~~~------g~-- 161 (489)
..+| ||+ .|.+..+|.+.+++.+++.+.... . ......++......++++.+|+++ +.
T Consensus 31 ~~~i~~l~----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~ 106 (444)
T 3if2_A 31 DQPVNMLG----GGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTS 106 (444)
T ss_dssp SSCCEECS----CCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred chhhhccC----CCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCH
Confidence 4578 887 344433466778888777764222 1 011122333344578999999887 22
Q ss_pred CCEEEeCccHHHHHHhHhhhcCCCC--------------EEEE-cCCCchHHHHH------HHhcCCeEEEecC------
Q 046230 162 PAAIVFGMGYVTNSAILPVLMRKGS--------------LIIS-DSLNHNSIVNG------ARGSGATIRVFQH------ 214 (489)
Q Consensus 162 ~~~i~~~sG~~a~~~~~~al~~~g~--------------~Vl~-~~~~h~~~~~~------~~~~g~~~~~~~~------ 214 (489)
++.+++++|++++..++.++.++|+ .|++ ..+.|..+... ....+..++.++.
T Consensus 107 ~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 186 (444)
T 3if2_A 107 ENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGF 186 (444)
T ss_dssp GGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEE
T ss_pred HHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCc
Confidence 3455556667777888888888887 5665 48888877653 2334666666652
Q ss_pred ----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCC
Q 046230 215 ----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKT 287 (489)
Q Consensus 215 ----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~ 287 (489)
-|+++|+++++.. . .++.+|++..+++++|.+.+ +++|+++|++||++||+||+|+. +..
T Consensus 187 ~~~~~d~~~l~~~l~~~-~---------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~--~~~- 253 (444)
T 3if2_A 187 FKYRVDFEALENLPALK-E---------GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGM--PFP- 253 (444)
T ss_dssp EEEECCHHHHHTCHHHH-T---------TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCT--TTT-
T ss_pred cccCCCHHHHHHHHHhc-C---------CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCC--ccc-
Confidence 2888998876431 0 23455666667899999988 89999999999999999999972 211
Q ss_pred CCccccccCC--CCCCccEEEcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccC
Q 046230 288 GRGVCELLEV--DTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 288 G~~~~~~~~v--~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
+.. ..+. ...+.+++++||||. +++| ||+++++++++.+........++ .+++.++++.+.++...
T Consensus 254 ~~~---~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~--- 324 (444)
T 3if2_A 254 NII---YSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLA--PTRFGAAIATPLVANDR--- 324 (444)
T ss_dssp CCB---CSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSS--CCCHHHHHHHHHHHTSH---
T ss_pred ccc---cccccccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCC--CChHHHHHHHHHHHcCc---
Confidence 100 1111 113457899999997 6557 99999999999887665443333 67777777777665320
Q ss_pred CCchHHH-HHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCcC--
Q 046230 363 GSSRGAQ-KLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPATP-- 434 (489)
Q Consensus 363 ~~~~~~~-~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~-- 434 (489)
......+ .++.++++.+.+.+.|++. ++.+..+..++++++.+.. .....++.+.|.++||.+.+...+...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~ 404 (444)
T 3if2_A 325 IKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVD 404 (444)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCC
Confidence 0001122 5566777778888877663 5667666778888888775 457788999999999999984432211
Q ss_pred -----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 435 -----LLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 435 -----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
...+++||+++. |+++|++++++|.++++++.
T Consensus 405 ~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 405 VSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp CTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHH
Confidence 123689999974 99999999999999987753
No 166
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.95 E-value=1.7e-25 Score=228.65 Aligned_cols=317 Identities=16% Similarity=0.170 Sum_probs=231.0
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNH 195 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h 195 (489)
+|++.+++.+++++...+ .+....|..++..++++.+++++|.++.+++++|++++..++.++ .++|+.|+++.+.|
T Consensus 15 ~~~~~~a~~~~~~~~~~~--~~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~ 92 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWA--ISGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTW 92 (418)
T ss_dssp CHHHHHHHHHHHHHTCCS--TTSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHhcCCcc--ccCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence 578999999999874322 112334667778999999999999988899999999998888888 78999999999999
Q ss_pred hHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc
Q 046230 196 NSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY 269 (489)
Q Consensus 196 ~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~ 269 (489)
.++...++..|++++.++.+ |+++|++.+++ ++.+|++. +++|...++++|.++|++|
T Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~---~~~G~~~~~~~i~~~~~~~ 156 (418)
T 2c81_A 93 IATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-------------KTKAIIPV---HLFGSMANMDEINEIAQEH 156 (418)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-------------TEEEECCB---CCTTCCCCHHHHHHHHHHT
T ss_pred HhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-------------CCeEEEEe---CCcCCcccHHHHHHHHHHC
Confidence 99999999999999988765 67777766642 23445443 4689999999999999999
Q ss_pred CcEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCC-cceEEEeC-HHHHHHHHhhCCC---------
Q 046230 270 KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGS-CGGYIAGS-KELIQYLKYTCPA--------- 336 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~-~GG~i~~~-~~~~~~l~~~~~~--------- 336 (489)
|++||+||+|+.+.. ..+.. .+.-+ |+.+.|| +|++|+ .||+++++ +++++.+......
T Consensus 157 ~~~li~D~a~~~~~~-~~~~~----~~~~~---~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 228 (418)
T 2c81_A 157 NLFVIEDCAQSHGSV-WNNQR----AGTIG---DIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSS 228 (418)
T ss_dssp TCEEEEECTTCTTCE-ETTEE----TTSSS---SEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGG
T ss_pred CCEEEEECcccccCc-cCCEe----ccccc---ceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 999999999995531 23322 11112 5666688 999987 23899984 7887776542211
Q ss_pred -----cc----------cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCC--
Q 046230 337 -----HL----------YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDS-- 398 (489)
Q Consensus 337 -----~~----------~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~-- 398 (489)
+. +...++++.++.....++ ..++..++.+++.+++.+.|+++ |+.+.....+
T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~---------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 299 (418)
T 2c81_A 229 ELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ---------ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVS 299 (418)
T ss_dssp GCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT---------THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEE
T ss_pred ccccchhhccccccccCcCCCcCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCc
Confidence 11 111245555544444444 34667888888999999999988 7877633222
Q ss_pred ----CeEEEEeCC----CCcHHHHHHHHhhC-Cce---EEeecCCCc--CC----------------------C------
Q 046230 399 ----PVMPIMLYN----PAKIPAFSRECLRQ-NVA---VVTVAFPAT--PL----------------------L------ 436 (489)
Q Consensus 399 ----~~~~~~~~~----~~~~~~~~~~l~~~-Gi~---v~~~~~p~~--~~----------------------~------ 436 (489)
+++++.+.. .....++.+.|.++ ||. +.+...|.. |. +
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (418)
T 2c81_A 300 RQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSE 379 (418)
T ss_dssp ECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHH
T ss_pred ccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHH
Confidence 355566653 44678899999999 999 775432311 00 0
Q ss_pred ---CCeEEEeecCCC-CHHHHHHHHHHHHHHHHHhC
Q 046230 437 ---LARARICISASH-TKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 437 ---~~~iRi~~~~~~-t~edid~~l~~l~~~~~~~~ 468 (489)
.+.+||+++..+ |++|+++++++|++++++++
T Consensus 380 ~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 380 RASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp HHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 258999999999 99999999999999987654
No 167
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.95 E-value=2.4e-26 Score=237.63 Aligned_cols=336 Identities=17% Similarity=0.180 Sum_probs=217.2
Q ss_pred eeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHH----HHHHHHhCCCC----EEE-eCc
Q 046230 101 RCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELE----ECVARFVGKPA----AIV-FGM 169 (489)
Q Consensus 101 ~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~----~i~-~~s 169 (489)
+.|++ .|.||+ +|.|.+|+...+.+ |+.+..+++...|. +...+++ +++++++|.+. +.+ ++|
T Consensus 55 ~~i~lias~n~~-----~~~V~eA~~~~l~~~y~~G~~g~r~~~G~-~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~s 128 (490)
T 2a7v_A 55 RGLELIASENFC-----SRAALEALGSCLNNKYSEGYPGKRYYGGA-EVVDEIELLCQRRALEAFDLDPAQWGVNVQPYS 128 (490)
T ss_dssp HSEECCTTCCCC-----CHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSS
T ss_pred cCceEECCCCCC-----CHHHHHHHHHHHcCCCccCCCcccccCcc-HHHHHHHHHHHHHHHHHcCCCcccCceEEeCCc
Confidence 34555 566663 58899998887754 66666666655554 2334555 89999999875 444 469
Q ss_pred cHHHHHHhHhhhcCCCCEEEEcCCCchHHHH--------HHHhcCCeE--EEec------CCCHHHHHHHHHHHHhcCCC
Q 046230 170 GYVTNSAILPVLMRKGSLIISDSLNHNSIVN--------GARGSGATI--RVFQ------HNTPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 170 G~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~--------~~~~~g~~~--~~~~------~~d~~~Le~~l~~~~~~g~~ 233 (489)
|+++|..++.+++++||.|+++.+.|++... .+..+|..+ +.++ +.|+++|+++++..
T Consensus 129 Gt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~------ 202 (490)
T 2a7v_A 129 GSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF------ 202 (490)
T ss_dssp HHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHH------
T ss_pred hHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc------
Confidence 9999999999999999999999998865321 233455433 3333 23899999998753
Q ss_pred CCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc
Q 046230 234 RTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
+.+++++..+.+ |...++++|+++|++||++|++|++|..|.++ .|.... .+ ..+|+++.|++|+|
T Consensus 203 -----~~klIi~~~s~~---~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~-~g~~~~-~~----~~aDiv~~S~hK~l 268 (490)
T 2a7v_A 203 -----RPRLIIAGTSAY---ARLIDYARMREVCDEVKAHLLADMAHISGLVA-AKVIPS-PF----KHADIVTTTTHKTL 268 (490)
T ss_dssp -----CCSEEEECCSSC---CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHH-TTSSCC-GG----GTCSEEEEESSGGG
T ss_pred -----CCcEEEEcCCCC---CCcccHHHHHHHHHHcCCEEEEcccccccccc-CCcCCC-CC----CCCCEEEECCcccC
Confidence 234433333343 34678999999999999999999999866443 222111 11 13599999999999
Q ss_pred -CCcceEEEeCHH---------------HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Q 046230 314 -GSCGGYIAGSKE---------------LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIREN 377 (489)
Q Consensus 314 -g~~GG~i~~~~~---------------~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (489)
|+.||+++++++ +.+.++....+...+ +.++..+++..+++..+.. .+.++..+++.++
T Consensus 269 ~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qg-gp~~~~iaAla~Al~~~~~----~~~~~~~~~~~~n 343 (490)
T 2a7v_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQG-GPHNHAIAAVAVALKQACT----PMFREYSLQVLKN 343 (490)
T ss_dssp CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCC-SCCHHHHHHHHHHHHHHHS----HHHHHHHHHHHHH
T ss_pred ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCC-CchHHHHHHHHHHHHHHhh----hhHHHHHHHHHHH
Confidence 455799988763 456665443322222 2455556666666665521 1347788999999
Q ss_pred HHHHHHHHHhCCCeeeC-CCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCC--cCCCCCeEEEeecC----CCC
Q 046230 378 SNFFRSELQKMGFEVLG-DNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPA--TPLLLARARICISA----SHT 449 (489)
Q Consensus 378 ~~~l~~~L~~~g~~v~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~--~~~~~~~iRi~~~~----~~t 449 (489)
.+++++.|++.|+.+.. ..+++++++.+... ....++.+.|.++||.+.....|. .|...+.+||+.++ .++
T Consensus 344 a~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~ 423 (490)
T 2a7v_A 344 ARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFR 423 (490)
T ss_dssp HHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCC
T ss_pred HHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCC
Confidence 99999999999998864 34578888887643 356778888988999998643333 24456789997653 478
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 046230 450 KEDLIKALEVISRVGDLV 467 (489)
Q Consensus 450 ~edid~~l~~l~~~~~~~ 467 (489)
++|++++++.|.++++..
T Consensus 424 ~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 424 EDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999988643
No 168
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.95 E-value=7.9e-27 Score=236.41 Aligned_cols=328 Identities=12% Similarity=0.073 Sum_probs=227.1
Q ss_pred cceeEecccccccCCC---CCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh-CC---CC-EEE--eC
Q 046230 99 VNRCLNLGSYNYLGFA---ASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV-GK---PA-AIV--FG 168 (489)
Q Consensus 99 g~~~id~~s~~~lg~~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~---~~-~i~--~~ 168 (489)
+..+|||+++.|++.. ..++.+.+++.+++++ + .... ++......++++.+|+++ +. ++ .++ ++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~----y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~ 98 (394)
T 2ay1_A 25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET-E-TTKT----YAGLSGEPEFQKAMGELILGDGLKSETTATLATV 98 (394)
T ss_dssp CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH-C-CCCC----CCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEE
T ss_pred CccccccccceeeCCCCCccCcHHHHHHHHHhcCC-c-ccCC----CCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecC
Confidence 5678999988775432 2357888888888765 2 1111 122233478999999987 43 34 444 56
Q ss_pred ccHHHHHHhHhhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHHHHhcCCCCCCCCC
Q 046230 169 MGYVTNSAILPVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
Q Consensus 169 sG~~a~~~~~~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~Le~~l~~~~~~g~~~~~~~~ 239 (489)
+|++++..++.++.. +|+.|+++.++|+++...++..|++++.++. + |+++|++.+++. +.
T Consensus 99 g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~ 168 (394)
T 2ay1_A 99 GGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA----------KK 168 (394)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC----------CT
T ss_pred CchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC----------CC
Confidence 677777777766654 8999999999999999999999999988887 3 788999888651 12
Q ss_pred ccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC--Cc-cccccCCCCCCccEEEccccccc
Q 046230 240 KKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG--RG-VCELLEVDTADVDIMMGTFTKSF 313 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G--~~-~~~~~~v~p~~~Di~~~t~sK~~ 313 (489)
++.++++.++++++|.+.+ +++|+++|++||+++|+||+|+ .++.+| .. ....+.... +.+++++||||++
T Consensus 169 ~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~ 245 (394)
T 2ay1_A 169 GDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQ--GFGDGLEEDAAGTRLIASRI-PEVLIAASCSKNF 245 (394)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCT--TSSSCHHHHHHHHHHHHHHC-SSEEEEEECTTTT
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCcc--ccccCcccchHHHHHHhhcC-CCEEEEEeccCCC
Confidence 3567778999999998876 6789999999999999999999 666654 11 121121111 1257889999999
Q ss_pred CCcc---eEEEe---CHHHHHHHHh----hCCCcccccCCCHHHHHHHHHHHHHHH-ccCCCchHHHHHHHHHHHHHHHH
Q 046230 314 GSCG---GYIAG---SKELIQYLKY----TCPAHLYATSISPPAAEQIISAIKVIL-GEDGSSRGAQKLARIRENSNFFR 382 (489)
Q Consensus 314 g~~G---G~i~~---~~~~~~~l~~----~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~~l~ 382 (489)
|.+| ||+++ ++++++.+.. .... .++ ..+++.++++.++|+... .+......++.+++++++.+++.
T Consensus 246 ~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~-~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 323 (394)
T 2ay1_A 246 GIYRERTGCLLALCADAATRELAQGAMAFLNRQ-TYS-FPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLA 323 (394)
T ss_dssp TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHT-TTS-SCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCccceEEEEeCCHHHHHHHHHHHHHHHhh-hcC-CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9778 99987 6765544321 1111 122 247778888888776320 00000145678888999999999
Q ss_pred HHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHH
Q 046230 383 SELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALE 458 (489)
Q Consensus 383 ~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (489)
+.|++++ +.+..+.++.++++.+ ....+.+.|.++||.+.+ .+||+++ .+|+++++++++
T Consensus 324 ~~L~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~l~~~gi~v~~-----------~~Ris~~-~~~~~~i~~~~~ 387 (394)
T 2ay1_A 324 GELRDLSGSDRFGFVAEHRGMFSRLGA----TPEQVKRIKEEFGIYMVG-----------DSRINIA-GLNDNTIPILAR 387 (394)
T ss_dssp HHHHHHHTSSTTTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT-----------TCEEEGG-GCCTTTHHHHHH
T ss_pred HHHHhcCCCCCeeEEcCCceEEEeeCC----CHHHHHHHHHhCCEEecC-----------CCeEEee-cCCHhhHHHHHH
Confidence 9998875 6555445566544322 234566677788999872 2699987 579999999999
Q ss_pred HHHHH
Q 046230 459 VISRV 463 (489)
Q Consensus 459 ~l~~~ 463 (489)
+|+++
T Consensus 388 ~l~~~ 392 (394)
T 2ay1_A 388 AIIEV 392 (394)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99875
No 169
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=6.3e-26 Score=226.52 Aligned_cols=311 Identities=11% Similarity=0.029 Sum_probs=226.3
Q ss_pred CCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC--CEE-EeCccHHHHHHhHhhhcCCCCEEEEcC
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP--AAI-VFGMGYVTNSAILPVLMRKGSLIISDS 192 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i-~~~sG~~a~~~~~~al~~~g~~Vl~~~ 192 (489)
-++.+.+++.+++.+...+.. . ......+...++++.+++++|.+ +.+ ++++|++++..++.++..+ +.+++..
T Consensus 15 ~~~~v~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~ 91 (362)
T 3ffr_A 15 LYPTVRQHMITALDEKIGVIS-H-RSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVN 91 (362)
T ss_dssp CCTTHHHHHHHHHHTTTTTSC-T-TSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEEC
T ss_pred CCHHHHHHHHHHhcCCccCcC-C-CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcC
Confidence 367899998888876221111 1 11123466788999999999863 444 4466777788888888887 6677777
Q ss_pred CCchH-HHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH
Q 046230 193 LNHNS-IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC 266 (489)
Q Consensus 193 ~~h~~-~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~ 266 (489)
+.|+. ....+...|++++.++.+ |+++|+ +. .++.+|++.++++++|.+.++++|.++|
T Consensus 92 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-------------~~~~~v~~~~~~nptG~~~~l~~i~~la 156 (362)
T 3ffr_A 92 GSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-------------ADAEIICLTHNETSSGVSMPVEDINTFR 156 (362)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-------------TTCCEEEEESEETTTTEECCHHHHTTSG
T ss_pred cHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-------------CCccEEEEEcCCCCcceeCCHHHHHHHH
Confidence 66663 334566779988888754 677776 21 2344566667899999999999999999
Q ss_pred HHc-CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHHHHHhhCC-----Cc-
Q 046230 267 KKY-KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKYTCP-----AH- 337 (489)
Q Consensus 267 ~~~-~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~~l~~~~~-----~~- 337 (489)
++| |+++|+|++|+.|.. ..++ .++|+++.|++|+++ ++| |+++.++++++.+..... .+
T Consensus 157 ~~~p~~~li~D~a~~~~~~---------~~~~--~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~ 225 (362)
T 3ffr_A 157 DKNKDALIFVDAVSSLPYP---------KFDW--TKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTY 225 (362)
T ss_dssp GGSTTSEEEEECTTTTTSS---------CCCT--TSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCST
T ss_pred HhCCCCEEEEecccccCCc---------ccCh--hHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCccc
Confidence 999 999999999985432 1112 225899999999998 667 899999998887765321 00
Q ss_pred -------------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC----CCCC
Q 046230 338 -------------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD----NDSP 399 (489)
Q Consensus 338 -------------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~----~~~~ 399 (489)
....+.+...++++.++++.+..+ ..++.+++++++.+++.+.|+++ |+.+..+ ....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 301 (362)
T 3ffr_A 226 HTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI----SADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT 301 (362)
T ss_dssp TSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred ccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc----cHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence 012346777777777888876321 25788899999999999999999 8887652 2356
Q ss_pred eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 400 VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
++++.+.. ...++.+.|.++||.+.+... +...+++|+++...+|++|+++++++|++++
T Consensus 302 ~~~~~~~~--~~~~~~~~l~~~gi~~~~g~~---~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 302 TIVANTTM--LPGEINKILEPFDMAVGAGYG---SKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEEEESS--CHHHHHHHHGGGTEEEEECSG---GGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEecCC--CHHHHHHHHHHCCeEEecCcc---ccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 67777665 678999999999999985321 2345799999988899999999999998764
No 170
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=4.3e-26 Score=230.14 Aligned_cols=295 Identities=15% Similarity=0.079 Sum_probs=213.7
Q ss_pred hhHHHHHHHHHHHhCCCCEEEe-CccHHHHHHhHhhhcCCCCEEEEcCCCchHHH--HHHHhcC--CeEEEec-------
Q 046230 146 MVHNELEECVARFVGKPAAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIV--NGARGSG--ATIRVFQ------- 213 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~--~~~~~~g--~~~~~~~------- 213 (489)
+...++++.++++++.++.+++ ++|++++.+++..+ .+|+.|++..+.|.+.. ..+...| ..++.++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 113 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDT 113 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccc
Confidence 4557889999999998777766 58888886666554 58888888777776543 2233344 3555543
Q ss_pred -------CCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccc
Q 046230 214 -------HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGA 283 (489)
Q Consensus 214 -------~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~ 283 (489)
..|++++++.+++. +..+|++..+.+++|.+.| +++|+++|++||+++|+|++++ |.
T Consensus 114 ~~~~~~~~~d~~~l~~~i~~~------------~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~ 180 (379)
T 3ke3_A 114 EAPKPFAPVDIETAVAKIKED------------KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC 180 (379)
T ss_dssp SSCCCEECCCHHHHHHHHHHH------------TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT
T ss_pred cccCCCCCCCHHHHHHHHhhc------------CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC
Confidence 35889999998652 2334666677788899999 9999999999999999999987 52
Q ss_pred ccCCCCccccccCCCCCCccEEEcccccccCC-cc-eEEEeCHHHHHHHHhhC-CCcc-------------------ccc
Q 046230 284 VGKTGRGVCELLEVDTADVDIMMGTFTKSFGS-CG-GYIAGSKELIQYLKYTC-PAHL-------------------YAT 341 (489)
Q Consensus 284 ~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~-~G-G~i~~~~~~~~~l~~~~-~~~~-------------------~~~ 341 (489)
.. ...+.+ ++|+++.|++|++++ .| |+++.++++++.+.... .++. +..
T Consensus 181 ~~----~~~~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 251 (379)
T 3ke3_A 181 VW----LDMKEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHA 251 (379)
T ss_dssp CC----CCHHHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSS
T ss_pred cc----cccccc-----CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCC
Confidence 20 011222 348888899999964 35 89999999998886522 1111 222
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC--CCCeEEEEeCCCCcHHHHHHHHh
Q 046230 342 SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN--DSPVMPIMLYNPAKIPAFSRECL 419 (489)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 419 (489)
+.|+..++++.++|+.+..+ ..++..++.+++.+++++.|+++|+.+..+. .++++....... ....+.+.|.
T Consensus 252 t~~~~~~~a~~aal~~~~~~----g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~L~ 326 (379)
T 3ke3_A 252 TMPTDSLRQFRDAILEAKEI----GFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTER-DDMHKGSAFA 326 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC-HHHHSSHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCC-cchHHHHHHH
Confidence 57888888899999988421 2468889999999999999999998876543 255444433322 2223367888
Q ss_pred hCCceEEeecCCCc--CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 420 RQNVAVVTVAFPAT--PLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 420 ~~Gi~v~~~~~p~~--~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
++||.+.+...+.+ |...+++||+++..+|++||++++++|+++++++.
T Consensus 327 ~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 327 EAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp HTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999987554433 44468999999989999999999999999988764
No 171
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.95 E-value=4e-26 Score=232.79 Aligned_cols=331 Identities=12% Similarity=0.034 Sum_probs=227.1
Q ss_pred cceeEecccccccCCCCC---CccchHHHHH-HHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEE-
Q 046230 99 VNRCLNLGSYNYLGFAAS---DEYCTPRVIE-SLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIV- 166 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~---~~~v~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~- 166 (489)
|+.+|||+++.|+.+..+ ++.+.+++.+ ++.. + ... .++......++++.+++++.. ++.++
T Consensus 28 ~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~-~-~~~----~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~ 101 (412)
T 1yaa_A 28 RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS-S-YNH----EYLGITGLPSLTSNAAKIIFGTQSDALQEDRVIS 101 (412)
T ss_dssp CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCT-T-CCC----CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCc-c-ccc----CCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEE
Confidence 567999998888666432 4556666666 5432 1 111 112223347899999998832 34444
Q ss_pred --eCccHHHHHHh--HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC-C------CHHHHHHHHHHHHhcCCCCC
Q 046230 167 --FGMGYVTNSAI--LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH-N------TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 167 --~~sG~~a~~~~--~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~-~------d~~~Le~~l~~~~~~g~~~~ 235 (489)
+++|++++..+ +.....+|+.|+++.++|.++...++..|++++.++. + |+++|++.+++.
T Consensus 102 ~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-------- 173 (412)
T 1yaa_A 102 VQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKA-------- 173 (412)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS--------
T ss_pred EeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC--------
Confidence 45566666554 3344468999999999999999999999999988877 2 788999888752
Q ss_pred CCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCC---C--ccccccCCCCCC--ccEE
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTG---R--GVCELLEVDTAD--VDIM 305 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G---~--~~~~~~~v~p~~--~Di~ 305 (489)
+..++++++...++++|.+.+ +++|+++|++||+++|+||+|+ .++..+ . ...+..... .+ .+|+
T Consensus 174 --~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~ 248 (412)
T 1yaa_A 174 --PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ--GFATGDLDKDAYAVRLGVEKL-STVSPVFV 248 (412)
T ss_dssp --CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT--TTSSSCHHHHTHHHHHHHHHT-TTTCCEEE
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc--cccCCcccchhHHHHHHHhcC-CCCcceEE
Confidence 113566777899999998865 6789999999999999999998 666554 2 121222221 11 3688
Q ss_pred EcccccccCCcc---eEEE--e-----CHH----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc-cCCCchHHHH
Q 046230 306 MGTFTKSFGSCG---GYIA--G-----SKE----LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG-EDGSSRGAQK 370 (489)
Q Consensus 306 ~~t~sK~~g~~G---G~i~--~-----~~~----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~-~~~~~~~~~~ 370 (489)
++||||.+|++| ||++ + +++ +++.+....... + .+.+++.++++.++|+...- +....+.++.
T Consensus 249 ~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1yaa_A 249 CQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSE-V-SNPPAYGAKIVAKLLETPELTEQWHKDMVTM 326 (412)
T ss_dssp EEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTT-T-SSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred EeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhc-c-CCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999888 9998 7 566 777776532211 1 23577888888887764300 0000145778
Q ss_pred HHHHHHHHHHHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecC
Q 046230 371 LARIRENSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISA 446 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~ 446 (489)
+++++++.+++.+.|++++ +.+..+.++.++++ . .....+.+.+.++||.+.+ .+||+++
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~-----------~~Ris~~- 390 (412)
T 1yaa_A 327 SSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFT--G--LTPQMVKRLEETHAVYLVA-----------SGRASIA- 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEEC--C--CCHHHHHHHHHHHCEECCT-----------TSEEEGG-
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEee--C--CCHHHHHHHHHhCCEEecc-----------CcEEEEc-
Confidence 8899999999999999876 66655555554332 2 2244564444567999872 4899997
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 046230 447 SHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 447 ~~t~edid~~l~~l~~~~~~ 466 (489)
.+|++++++++++|+++++.
T Consensus 391 ~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 391 GLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp GCCTTTHHHHHHHHHHHHHH
T ss_pred cCCHhHHHHHHHHHHHHHHh
Confidence 36999999999999998864
No 172
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.95 E-value=4e-26 Score=232.87 Aligned_cols=336 Identities=10% Similarity=0.022 Sum_probs=219.8
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCC--CcccCCCcchhHHHHHHHHHHHh------CC-CCEEEe-C
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTC--SSRVDGGTLMVHNELEECVARFV------GK-PAAIVF-G 168 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~------g~-~~~i~~-~ 168 (489)
+..++||+ .|.+...|.+.+++.+++.+...... .....++......++++.+|+++ +. ++.+++ +
T Consensus 30 ~~~~i~l~----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~ 105 (417)
T 3g7q_A 30 TPGAIMLG----GGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTN 105 (417)
T ss_dssp --CCEECS----CCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred CCCceEec----CcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeC
Confidence 35688987 44443334445666655554210000 00011223334478888898887 22 244555 5
Q ss_pred ccHHHHHHhHhhhcCCCC-----EEEEc-CCCchHHHHHHHh------cCCeEEEecCC------CHHHHHHHHHHHHhc
Q 046230 169 MGYVTNSAILPVLMRKGS-----LIISD-SLNHNSIVNGARG------SGATIRVFQHN------TPSHLEEVLREQIAE 230 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~-----~Vl~~-~~~h~~~~~~~~~------~g~~~~~~~~~------d~~~Le~~l~~~~~~ 230 (489)
+|++++..++.++.++|+ .|++. .++|..+...+.. .+..+..++.+ |+++|+ +.
T Consensus 106 G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~----- 178 (417)
T 3g7q_A 106 GSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG----- 178 (417)
T ss_dssp CHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-----
T ss_pred CcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-----
Confidence 566777888899988876 78886 8999887655422 13344444433 677776 22
Q ss_pred CCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCC--CCCCccEE
Q 046230 231 GQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEV--DTADVDIM 305 (489)
Q Consensus 231 g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v--~p~~~Di~ 305 (489)
.++.+|++.++++++|.+.+ +++|+++|++||+++|+||+|+ .+.. +. ...+. ...+.+|+
T Consensus 179 --------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~--~~~~-~~---~~~~~~~~~~~~~i~ 244 (417)
T 3g7q_A 179 --------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG--VPFP-GI---IFSEARPLWNPNIIL 244 (417)
T ss_dssp --------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTC--TTTT-CC---BCSCCCCCCCTTEEE
T ss_pred --------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCc--cccc-cc---cccccccCCCCCEEE
Confidence 24556777778899999988 8999999999999999999997 3211 10 01111 11345788
Q ss_pred EcccccccCCcc---eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHH-HHHHHHHHHHHH
Q 046230 306 MGTFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQ-KLARIRENSNFF 381 (489)
Q Consensus 306 ~~t~sK~~g~~G---G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~-~~~~~~~~~~~l 381 (489)
++|||| ++++| ||+++++++++.+......+.++ .+++.++++.+.|+... ......+ .+++++++.+.+
T Consensus 245 ~~s~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~ 318 (417)
T 3g7q_A 245 CMSLSK-LGLPGSRCGIIIANDKTITAIANMNGIISLA--PGGMGPAMMCEMIKRND---LLRLSETVIKPFYYQRVQQT 318 (417)
T ss_dssp EEESGG-GTCTTSCCEEEECCHHHHHHHHHHHHHHCCC--CCSHHHHHHHHHHHTTC---HHHHHHHTHHHHHHHHHHHH
T ss_pred EEechh-ccCCCcceEEEEeCHHHHHHHHHhhcceeeC--CCcHHHHHHHHHHcCcc---hHHHHHHHHHHHHHHHHHHH
Confidence 999999 56667 99999999999887765443333 67777877777775320 0001122 556677788888
Q ss_pred HHHHHhC----CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCcC-C-----CCCeEEEeecCCCCH
Q 046230 382 RSELQKM----GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPATP-L-----LLARARICISASHTK 450 (489)
Q Consensus 382 ~~~L~~~----g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~-~-----~~~~iRi~~~~~~t~ 450 (489)
.+.|++. ++.+..+.++.++++.+.. .....++.+.|.++||.+.+....... . ..+++||+++. |+
T Consensus 319 ~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~ 396 (417)
T 3g7q_A 319 IAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EP 396 (417)
T ss_dssp HHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CH
T ss_pred HHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CH
Confidence 8888763 5777777778888887765 457788999999999999984322211 1 15799999963 99
Q ss_pred HHHHHHHHHHHHHHHHh
Q 046230 451 EDLIKALEVISRVGDLV 467 (489)
Q Consensus 451 edid~~l~~l~~~~~~~ 467 (489)
++|++++++|.++++++
T Consensus 397 ~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 397 DKIEAGVKILAEEIERA 413 (417)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 173
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=6.5e-26 Score=233.89 Aligned_cols=337 Identities=18% Similarity=0.177 Sum_probs=227.4
Q ss_pred eeEecc-cccccCCCCCCccchHHHHHHHH-HhCCCCCCcccCCCcchhH--HHHH-HHHHHHhCCCCEEE-eCccHHHH
Q 046230 101 RCLNLG-SYNYLGFAASDEYCTPRVIESLK-KYSPSTCSSRVDGGTLMVH--NELE-ECVARFVGKPAAIV-FGMGYVTN 174 (489)
Q Consensus 101 ~~id~~-s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~--~~l~-~~la~~~g~~~~i~-~~sG~~a~ 174 (489)
..|++. +.|++ +|.+.+++.+++. .|+.+..+++...|..... ++++ +++++++|.+...+ ++||++++
T Consensus 46 ~~i~l~~~~~~~-----~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~ 120 (447)
T 3h7f_A 46 DTLEMIASENFV-----PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQAN 120 (447)
T ss_dssp HSEECCTTCCCC-----CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred CceeEecCCCCC-----CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHH
Confidence 456664 33433 5899999998885 5655544444444443333 4555 89999999987777 79999999
Q ss_pred HHhHhhhcCCCCEEEEcCCCchH-HHHHH--Hh--cCCeEEEecC------CCHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 175 SAILPVLMRKGSLIISDSLNHNS-IVNGA--RG--SGATIRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~-~~~~~--~~--~g~~~~~~~~------~d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
..++.++.++||.|++..+.|++ +..+. .. .+..+..++. .|+++|++++++. ..+++
T Consensus 121 ~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~~~i 189 (447)
T 3h7f_A 121 AAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEF-----------RPKVI 189 (447)
T ss_dssp HHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHH-----------CCSEE
T ss_pred HHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhc-----------CCeEE
Confidence 98999999999999999999876 22111 11 2344555542 3899999998653 23444
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccC-CcceEEEe
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCGGYIAG 322 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~GG~i~~ 322 (489)
++..+.++ ++ .++++|+++|++||++||+||+|+.|.. ..|.. .+.. ...|+++.|+||+++ +.||++++
T Consensus 190 ~~~~~~~~-~~--~~l~~i~~l~~~~g~lli~Dea~~~g~~-~~g~~----~~~~-~~~di~~~s~sK~l~G~~gG~i~~ 260 (447)
T 3h7f_A 190 IAGWSAYP-RV--LDFAAFRSIADEVGAKLLVDMAHFAGLV-AAGLH----PSPV-PHADVVSTTVHKTLGGGRSGLIVG 260 (447)
T ss_dssp EEECSSCC-SC--CCHHHHHHHHHHHTCEEEEECTTTHHHH-HTTSS----CCST-TTCSEEEEESSGGGCCCSCEEEEE
T ss_pred EEcCCCCC-Cc--cCHHHHHHHHHHcCCEEEEECCchhhhh-cCCCC----CCCC-CCCcEEEecCCcCCCCCCeEEEEE
Confidence 44345543 33 3999999999999999999999875432 23321 1111 235899999999996 44699999
Q ss_pred CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-----CCeeeC-CC
Q 046230 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-----GFEVLG-DN 396 (489)
Q Consensus 323 ~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~v~~-~~ 396 (489)
++++++.+......+.+++ .+...++++.+++..+. ..+.++.++++.++.+++.+.|++. |+++.. ..
T Consensus 261 ~~~~~~~l~~~~~~~~~~~-~~~~~~~a~~~a~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~ 335 (447)
T 3h7f_A 261 KQQYAKAINSAVFPGQQGG-PLMHVIAGKAVALKIAA----TPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGT 335 (447)
T ss_dssp CGGGHHHHHHHHTTTTCSS-CCHHHHHHHHHHHHHTT----SHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSC
T ss_pred CHHHHHHHhhhcCCcccCC-ccHHHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCC
Confidence 9999988876544443432 33334445555555441 2245778899999999999999988 888764 23
Q ss_pred CCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCC---cCCCCCeEEEeecCC----CCHHHHHHHHHHHHHHHHHh
Q 046230 397 DSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPA---TPLLLARARICISAS----HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 397 ~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~---~~~~~~~iRi~~~~~----~t~edid~~l~~l~~~~~~~ 467 (489)
.++++++.+... .....+.+.|.++||.+.....|. .|...+.+||+++.. +|++|+++++++|+++++..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 336 DVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp SSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 566666666433 245566677777799988311111 233457799988654 78999999999999998754
No 174
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.94 E-value=1.3e-25 Score=222.59 Aligned_cols=303 Identities=16% Similarity=0.151 Sum_probs=221.4
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhC---C-CCEEEeCcc-HHHH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVG---K-PAAIVFGMG-YVTN 174 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~-~~~i~~~sG-~~a~ 174 (489)
.++|||+++.+ .++ .++.+.+++.+++.+.+... ++. ....++++.+|++++ . ++.+++++| ++++
T Consensus 19 ~~~i~l~~~~~-~~~-~~~~v~~a~~~~~~~~~~~~------y~~-~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al 89 (335)
T 1uu1_A 19 RDKTYLALNEN-PFP-FPEDLVDEVFRRLNSDALRI------YYD-SPDEELIEKILSYLDTDFLSKNNVSVGNGADEII 89 (335)
T ss_dssp CCSEEESSCCC-SSC-CCHHHHHHHHHTCCGGGGGS------CCC-SSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHH
T ss_pred CcceECCCCCC-CCC-CCHHHHHHHHHHhhhhhhhc------CCC-CchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHH
Confidence 35899976543 333 35788888888774321110 111 124899999999998 3 456666655 5555
Q ss_pred HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCc
Q 046230 175 SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGI 249 (489)
Q Consensus 175 ~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v 249 (489)
..++.++ |+.|+++ ++|+++...++..|++++.++.+ |+++| . +.++ |++..+
T Consensus 90 ~~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~------------~~~~-v~l~~p 147 (335)
T 1uu1_A 90 YVMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV-----G------------EGDV-VFIPNP 147 (335)
T ss_dssp HHHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC-----C------------TTEE-EEEESS
T ss_pred HHHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc-----C------------CCCE-EEEeCC
Confidence 7777777 7899999 99999999899999999888764 23333 1 2344 444445
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---eEEEeCHHH
Q 046230 250 YSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKEL 326 (489)
Q Consensus 250 ~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~ 326 (489)
++++|.+.+.+++.++++..| ++|+||+|+ .++.. ...+.++. .+.+++++||||++|.+| ||+++++++
T Consensus 148 ~nptG~~~~~~~l~~l~~~~~-~li~De~~~--~~~~~--~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 220 (335)
T 1uu1_A 148 NNPTGHVFEREEIERILKTGA-FVALDEAYY--EFHGE--SYVDFLKK--YENLAVIRTFSKAFSLAAQRVGYVVASEKF 220 (335)
T ss_dssp CTTTCCCCCHHHHHHHHHTTC-EEEEECTTH--HHHCC--CCGGGGGT--CSSEEEEEESTTTTTCGGGCCEEEEECHHH
T ss_pred CCCCCCCCCHHHHHHHHHhCC-EEEEECcch--hhcch--hHHHHhhh--CCCEEEEecchhhcCCcccCeEEEEeCHHH
Confidence 899999999999999999989 999999999 44422 22222222 334788999999999778 999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeC
Q 046230 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLY 406 (489)
Q Consensus 327 ~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~ 406 (489)
++.+...... + +.|++.++++.++|+.. ++.++.+++++++.+++.+.|+++|+.+.+ ..++++++.+.
T Consensus 221 ~~~l~~~~~~--~--~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~ 289 (335)
T 1uu1_A 221 IDAYNRVRLP--F--NVSYVSQMFAKVALDHR------EIFEERTKFIVEERERMKSALREMGYRITD-SRGNFVFVFME 289 (335)
T ss_dssp HHHHHHHSCT--T--CSCHHHHHHHHHHHHTH------HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC-CCSSEEEEECC
T ss_pred HHHHHHhcCC--C--CcCHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHCCcEEcC-CCCeEEEEECC
Confidence 9988876543 3 38888888888888742 146778889999999999999988877643 45667666654
Q ss_pred CCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
. ....++.+.|.++||.+.+ ..+++||+++ +++|+++++++|+++
T Consensus 290 ~-~~~~~~~~~l~~~gi~v~~--------~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 290 K-EEKERLLEHLRTKNVAVRS--------FREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp T-HHHHHHHHHHHHHTEEEEE--------ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred C-CCHHHHHHHHHHCCEEEEE--------CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 3 3456799999999999985 2468999984 478899999998753
No 175
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.7e-25 Score=233.83 Aligned_cols=338 Identities=13% Similarity=0.095 Sum_probs=237.5
Q ss_pred ccccCC-CCCCccchHHHHHHHHHhCCCC-CCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCccHHHHHHhHhhh
Q 046230 108 YNYLGF-AASDEYCTPRVIESLKKYSPST-CSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMGYVTNSAILPVL 181 (489)
Q Consensus 108 ~~~lg~-~~~~~~v~~a~~~~l~~~~~~~-~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~~~al 181 (489)
.+++|. .+.++.+.+++.+++.++.... ..+....|..++..++.+.+++++|.+ ..++.++|++++..++.++
T Consensus 67 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~ 146 (497)
T 3mc6_A 67 GKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSA 146 (497)
T ss_dssp TCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHH
T ss_pred CCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 444554 2234788899999988854322 112222344566677888889998876 4555677788887777776
Q ss_pred cC-----CC---CEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc
Q 046230 182 MR-----KG---SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE 247 (489)
Q Consensus 182 ~~-----~g---~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive 247 (489)
.. +| +.|+++.+.|.++...++..|+.++.++.+ |+++|++++.+ ++.+|+++
T Consensus 147 ~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------------~~~~v~~~ 213 (497)
T 3mc6_A 147 KMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINK-------------NTVLLVGS 213 (497)
T ss_dssp HHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCS-------------SEEEEEEE
T ss_pred HHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhh-------------CCEEEEEE
Confidence 53 44 799999999999999999999999988754 47788877643 45678888
Q ss_pred CcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccc---CCCCccccccCCCCCCccEEEccccccc-CCcc-eEEEe
Q 046230 248 GIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVG---KTGRGVCELLEVDTADVDIMMGTFTKSF-GSCG-GYIAG 322 (489)
Q Consensus 248 ~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g---~~G~~~~~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~ 322 (489)
.+.+++|.+.++++|.++|++||++||+||+|+.+.+. ..|.+....++....++|+++.+++|.+ ++.| |+++.
T Consensus 214 ~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~ 293 (497)
T 3mc6_A 214 APNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMY 293 (497)
T ss_dssp TTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEEC
T ss_pred CCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEe
Confidence 89999999999999999999999999999999822111 1222211122332345699999999997 5545 88888
Q ss_pred CHHHHHHHHhhC-CCc--------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe
Q 046230 323 SKELIQYLKYTC-PAH--------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM--GFE 391 (489)
Q Consensus 323 ~~~~~~~l~~~~-~~~--------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 391 (489)
+++.+....... ..+ .+..+.+....++..++++.+.. ...++.+++..++.+++++.|++. |+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~~~g~~ 369 (497)
T 3mc6_A 294 RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE----NGYIESCQEIVGAAMKFKKYIQENIPDLD 369 (497)
T ss_dssp SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 766554332111 110 11112233345555566665521 145778889999999999999994 898
Q ss_pred eeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 392 VLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 392 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
+..++...++.+... .....++.+.|.++||.+....+| +.+|++++ .+|++++++++++|+++++++..+
T Consensus 370 ~~~~~~~~~v~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~------~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 370 IMGNPRYSVISFSSK-TLNIHELSDRLSKKGWHFNALQKP------VALHMAFT-RLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp ECSCCCSSEEEEECT-TTTHHHHHHHHHTTTCBCEECCSS------CCEEEECC-TTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred EecCCCeeEEEEeCC-CCCHHHHHHHHHhCCEEEecCCCC------CeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 876666666655433 345788999999999998754433 35899998 789999999999999999887643
No 176
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=5.2e-25 Score=225.83 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=216.7
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|+++|.++++++++|++++..++.++.++||.|++..+.|+++... +...|++++.++.+|+++|
T Consensus 113 ~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 192 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGAL 192 (445)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHH
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 567789999999999998999999999989888998889999999999999987764 4557999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+++++. +...+|+++++.|++|.+.++++|.++|++||+++|+||+|+.+.+. .....
T Consensus 193 ~~ai~~------------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-------~~~~~--- 250 (445)
T 1qgn_A 193 ELALNQ------------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-------KALAL--- 250 (445)
T ss_dssp HHHHHH------------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-------CTTTT---
T ss_pred HHHhcc------------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-------Ccccc---
Confidence 999976 23267888999999999999999999999999999999999844321 11222
Q ss_pred CccEEEcccccccCCc----ceEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
++|+++.|++|.+|+. +|++++++++++.+..... .++...+|..+..++..|+.+ ..++++..+
T Consensus 251 g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~--~~g~~~~~~~a~~~~~~l~~l---------~~r~~~~~~ 319 (445)
T 1qgn_A 251 GADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHH--ILGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 319 (445)
T ss_dssp TCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHGGGH---------HHHHHHHHH
T ss_pred CCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHH--HhCCCCCHHHHHHHHHhHHHH---------HHHHHHHHH
Confidence 3499999999999875 4999999999888865432 245557888777777766643 556777788
Q ss_pred HHHHHHHHHHhC-CC-eeeCC----------------CCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCC-----
Q 046230 377 NSNFFRSELQKM-GF-EVLGD----------------NDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPA----- 432 (489)
Q Consensus 377 ~~~~l~~~L~~~-g~-~v~~~----------------~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~----- 432 (489)
+.+++.+.|++. ++ .+..+ ..+.++.+.+... .....+.+.|...++.+...+..+
T Consensus 320 ~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p 399 (445)
T 1qgn_A 320 TALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQP 399 (445)
T ss_dssp HHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECH
T ss_pred HHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecc
Confidence 889999999887 34 33322 2467888887643 235566666654455443322111
Q ss_pred ---------------cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 433 ---------------TPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 433 ---------------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.....+.+||++. .||+|++++.|+++++.
T Consensus 400 ~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 400 AIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp HHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 1122479999986 46899999999998864
No 177
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.94 E-value=2.4e-25 Score=231.34 Aligned_cols=322 Identities=17% Similarity=0.155 Sum_probs=226.4
Q ss_pred CCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEe-CccHHHHHHhHhhh----cCCCC----
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVF-GMGYVTNSAILPVL----MRKGS---- 186 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~~~~al----~~~g~---- 186 (489)
.+|.+.+++.+.+..|.. ........|..++..++++.+++++|.+..+++ ++|++++..++.++ ..+||
T Consensus 78 ~~p~v~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r 156 (474)
T 1wyu_B 78 YNPKLHEEAARLFADLHP-YQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTR 156 (474)
T ss_dssp CCCHHHHHHHHTTSSCCT-TSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CCHHHHHHHHHHHHhcCC-CCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 357777777765322211 100002335567788999999999998876656 66777775544443 34666
Q ss_pred -EEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC-CCh
Q 046230 187 -LIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL-CKF 259 (489)
Q Consensus 187 -~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~-~~l 259 (489)
.|+++.+.|+++...++..|.+++.++.+ |+++|++++.+ ++++|++.+. +++|.+ .++
T Consensus 157 ~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~-------------~t~~v~~~~p-n~~G~~~~~l 222 (474)
T 1wyu_B 157 RVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGP-------------HVAALMLTNP-NTLGLFERRI 222 (474)
T ss_dssp CEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCST-------------TEEEEEECSS-CTTSCCCTTH
T ss_pred CEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC-------------CceEEEEECC-CCCcccCCCH
Confidence 89999999999999999999999999876 88899888753 3556666665 568988 699
Q ss_pred HHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCc------c-eEEEeCHHHHHHHHh
Q 046230 260 PEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC------G-GYIAGSKELIQYLKY 332 (489)
Q Consensus 260 ~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~------G-G~i~~~~~~~~~l~~ 332 (489)
++|.++|++||+++|+||+|+.+.+|.. + ...++ +|++++|++|+|+.+ | |++++++++++.+..
T Consensus 223 ~~i~~l~~~~g~~li~Dea~~~~~~g~~-~--~~~~g-----~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~ 294 (474)
T 1wyu_B 223 LEISRLCKEAGVQLYYDGANLNAIMGWA-R--PGDMG-----FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPV 294 (474)
T ss_dssp HHHHHHHHHHTCEEEEEGGGGGGTTTTC-C--HHHHT-----CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCS
T ss_pred HHHHHHHHHcCCEEEEeCchhhhhccCC-C--cccCC-----CcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCC
Confidence 9999999999999999999985544321 1 11122 399999999999644 3 999999988776641
Q ss_pred h-----CCCcc------------cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 046230 333 T-----CPAHL------------YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD 395 (489)
Q Consensus 333 ~-----~~~~~------------~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~ 395 (489)
. ...+. .+.+.+++.++++++.++.+- .+..++..+++.++++++.+.|+++|+.+...
T Consensus 295 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g----~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 370 (474)
T 1wyu_B 295 PLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG----LEGLKKAAALAVLNARYLKELLKEKGYRVPYD 370 (474)
T ss_dssp CEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC
T ss_pred CeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCC
Confidence 0 00000 112367777888888777541 11345668889999999999999988876322
Q ss_pred CCCC-eEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 396 NDSP-VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 396 ~~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.... .+.+.+.......++.++|.++||.+....||. ...+.+||+++..+|++++++++++|++++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~--~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 371 GPSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPL--IVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp SSCCSCEEEBCSTTCCHHHHHHHHHHTTCCCCEESCST--TSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred CCcceEEEEEcCCCCCHHHHHHHHHHCCcccccccccc--ccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 2111 123333334567889999999999864344442 23578999998888999999999999998876
No 178
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.94 E-value=6.1e-25 Score=225.92 Aligned_cols=319 Identities=16% Similarity=0.149 Sum_probs=226.1
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|+++|+|+++++ ++++.+++.+++.+... .......++++.+|++++.++.+++++|++++..++
T Consensus 30 ~~~~i~~~~~~~------~~~~~~a~~~~~~~~~~---------~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al 94 (437)
T 3bb8_A 30 GKSVVPPSGKVI------GTKELQLMVEASLDGWL---------TTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLAL 94 (437)
T ss_dssp TTSCBCSCCCCC------CHHHHHHHHHHHHHCCC---------BSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CCccccCCCCCC------CHHHHHHHHHHHHcCCc---------CCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHH
Confidence 666777653332 47888999988876321 123567899999999999998899999999998888
Q ss_pred hhh---------cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEE
Q 046230 179 PVL---------MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIM 243 (489)
Q Consensus 179 ~al---------~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~ 243 (489)
.++ .++|+.|+++.+.|.++...+...|++++.++.+ |+++|++.+.. ..+++
T Consensus 95 ~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~------------~~~~v 162 (437)
T 3bb8_A 95 TALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD------------KTKAI 162 (437)
T ss_dssp HHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCT------------TEEEE
T ss_pred HHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC------------CCeEE
Confidence 877 7889999999999999999999999999888654 78888887753 24445
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCC---cceEE
Q 046230 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS---CGGYI 320 (489)
Q Consensus 244 vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~---~GG~i 320 (489)
++++ +.|...++++|.++|+++|+++|+||+|+.|... .++ .++..+ |+++.||+|+.+. .||++
T Consensus 163 ~~~~----~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~~~---d~~~~s~~~~k~l~~g~gg~~ 230 (437)
T 3bb8_A 163 MIAH----TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGK----MAGTFG---DIGTVSFYPAKHITMGEGGAV 230 (437)
T ss_dssp EEEC----GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTE----ETTSSS---SEEEEECSTTSSSCCSSCEEE
T ss_pred EEeC----CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCe----eccccc---CEEEEECcCCcCCCCCCeEEE
Confidence 5544 2466789999999999999999999999966443 332 223223 7877787554432 23999
Q ss_pred EeCHHHHH-HHHh---hCCC----------------------------------cccccCCCHHHHHHHHHHHHHHHccC
Q 046230 321 AGSKELIQ-YLKY---TCPA----------------------------------HLYATSISPPAAEQIISAIKVILGED 362 (489)
Q Consensus 321 ~~~~~~~~-~l~~---~~~~----------------------------------~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (489)
+++++.+. .+.. .... ..+...++++.+++++++|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~---- 306 (437)
T 3bb8_A 231 FTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERI---- 306 (437)
T ss_dssp EESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHH----
T ss_pred EeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHH----
Confidence 98855443 3221 1110 0011235688888888887754
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC-----C-CeEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCCc
Q 046230 363 GSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDND-----S-PVMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPAT 433 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~-----~-~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~ 433 (489)
++..++.+++.+++++.|+++ |+.+.+... + ..+.+.+.. .....++.+.|.++||.+.+...|..
T Consensus 307 -----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~ 381 (437)
T 3bb8_A 307 -----EEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNL 381 (437)
T ss_dssp -----HHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSG
T ss_pred -----HHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCccc
Confidence 556666788899999999988 765543211 2 123443432 24577899999999999986433221
Q ss_pred ---CCC------------------CCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 434 ---PLL------------------LARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 434 ---~~~------------------~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
|.. .+.+||++...+|++|+++++++|+++++
T Consensus 382 ~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 382 TRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp GGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred ccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 210 12599999999999999999999988753
No 179
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.94 E-value=1.2e-25 Score=229.86 Aligned_cols=326 Identities=14% Similarity=0.093 Sum_probs=221.0
Q ss_pred ceeEeccccccc---CCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CC--EEEe
Q 046230 100 NRCLNLGSYNYL---GFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PA--AIVF 167 (489)
Q Consensus 100 ~~~id~~s~~~l---g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~--~i~~ 167 (489)
..+|||+.+.|+ +....++.+.+++.+++++... ..+....|. .++++.+++++.. ++ .+++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~~~i~~ 122 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLP--RGYLPIDGI----AAYDASVQKLLLGDDSPLIAAGRVVTAQ 122 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCC--CCCCCTTCC----HHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCC--CCCCCCCCc----HHHHHHHHHHhcCCCccccccCceEEEE
Confidence 468999866443 3232246888888888876211 111122344 6777777777632 34 5666
Q ss_pred Cc-cHHHHHHh--HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHHHHhcCCCCCCC
Q 046230 168 GM-GYVTNSAI--LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH----N---TPSHLEEVLREQIAEGQPRTHR 237 (489)
Q Consensus 168 ~s-G~~a~~~~--~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~Le~~l~~~~~~g~~~~~~ 237 (489)
++ |++++..+ +.++.++||.|+++.++|.++...++..|++++.++. + |+++|++.+++.
T Consensus 123 t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---------- 192 (420)
T 4f4e_A 123 ALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY---------- 192 (420)
T ss_dssp EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC----------
T ss_pred CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC----------
Confidence 55 55566666 4466789999999999999999999999999999887 3 788999888642
Q ss_pred CCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC----ccccccCCCCCCccEEEcccc
Q 046230 238 PWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR----GVCELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 238 ~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~----~~~~~~~v~p~~~Di~~~t~s 310 (489)
+.++.++++.+++|++|.+.+ +++|+++|++||+++|+||+|+ .+...+. ......+. .+.+|+++|||
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~--~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~S 268 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQ--GFGESIEADAAAVRLFAAA--NLNVFVSSSFS 268 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT--TSSSCTTGGGHHHHHHHHT--TCCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccc--cccCCcchhhHHHHHHHhc--CCCEEEEEeCC
Confidence 125678888999999998855 7799999999999999999998 6666542 12222222 23478999999
Q ss_pred cccCCcc---eEEEe---CHHHHHHH----HhhCCCcccccCCCHHHHHHHHHHHHHH--HccCCCchHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG---SKELIQYL----KYTCPAHLYATSISPPAAEQIISAIKVI--LGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 311 K~~g~~G---G~i~~---~~~~~~~l----~~~~~~~~~~~~~~p~~~aa~~a~L~~i--~~~~~~~~~~~~~~~~~~~~ 378 (489)
|.+|++| ||++. ++++++.+ ....... + .+.++..++++.+.|+.. .. ....+.++.+++++++.
T Consensus 269 K~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~ 345 (420)
T 4f4e_A 269 KSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTN-Y-SNPPTHGGAIVAAVLASPELRA-SWVQELGEMRDRIRAMR 345 (420)
T ss_dssp TTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT-T-SSCCSHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred ccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcc-c-CCCCHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999878 98753 56655543 2211111 1 124455555555544421 00 00114577889999999
Q ss_pred HHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 379 NFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 379 ~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
+++.+.|+++ ++.+..+.++.++++.+ ....+.+.|.++||.+.+ . .|++++ .+++++++
T Consensus 346 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~l~~~gI~v~~-------~----~Ris~~-~~~~~~i~ 409 (420)
T 4f4e_A 346 NGLVERLKAAGIERDFSFINAQRGMFSYSGL----TSAQVDRLREEFGIYAVS-------T----GRICVA-ALNTRNLD 409 (420)
T ss_dssp HHHHHHHHHTTCSSCCTHHHHSCSSEEECCC----CHHHHHHHHHHHCEECCT-------T----SEEEGG-GCCTTTHH
T ss_pred HHHHHHHHhcCCCCCceeECCCccEEEEeCC----CHHHHHHHHHhCCEEecC-------C----CeEEEe-cCCHHHHH
Confidence 9999999987 56665555665544322 345566677778999883 1 399985 56888899
Q ss_pred HHHHHHHHHH
Q 046230 455 KALEVISRVG 464 (489)
Q Consensus 455 ~~l~~l~~~~ 464 (489)
+++++|++++
T Consensus 410 ~~~~~l~~~l 419 (420)
T 4f4e_A 410 VVANAIAAVL 419 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 180
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=1.3e-24 Score=220.49 Aligned_cols=316 Identities=15% Similarity=0.183 Sum_probs=224.6
Q ss_pred CCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEc
Q 046230 113 FAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISD 191 (489)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~ 191 (489)
.+.-+|++.+++.+++.+ +... . ..+...++++.+|++++.+..+++++|++++..++.++ .++|+.|+++
T Consensus 7 ~p~~~~~v~~a~~~~~~~-~~~~-----~--~g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~ 78 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKS-NYIA-----P--LGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLAS 78 (394)
T ss_dssp -----CCHHHHHHHHHHH-TTTS-----C--TTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHc-CCcc-----C--CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 333357899999998876 2110 0 12456899999999999988888899999998888888 8899999999
Q ss_pred CCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHH
Q 046230 192 SLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAIC 266 (489)
Q Consensus 192 ~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~ 266 (489)
.++|.++...++..|++++.++.+ |+++|++.+++. +.++.+|++.+ ++|...++++|.++|
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~~~v~~~~---~~G~~~~l~~i~~l~ 145 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKEC----------EKKPKALILTH---LYGNAAKMDEIVEIC 145 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHC----------SSCCCEEEEEC---GGGCCCCHHHHHHHH
T ss_pred CCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcc----------cCCceEEEEEC---CCCChhhHHHHHHHH
Confidence 999999999999999999988754 788999888751 01233444444 578899999999999
Q ss_pred HHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeC-HHHHHHHHhhCCCcc-----c
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGS-KELIQYLKYTCPAHL-----Y 339 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~-~~~~~~l~~~~~~~~-----~ 339 (489)
++||++||+||+|+.|.. +.|...... .++|+...|.+|.+++.+ |+++++ +++++.+........ +
T Consensus 146 ~~~~~~li~Dea~~~g~~-~~~~~~~~~-----~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~ 219 (394)
T 1o69_A 146 KENDIVLIEDAAEALGSF-YKNKALGTF-----GEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHY 219 (394)
T ss_dssp HHTTCEEEEECTTCTTCE-ETTEETTSS-----SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSC
T ss_pred HHcCCEEEEECcCcccce-eCCcccccc-----cCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccc
Confidence 999999999999986533 333321111 234777555589887544 999995 888888865432110 1
Q ss_pred -------ccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC----CC-CeEEEEeCC
Q 046230 340 -------ATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN----DS-PVMPIMLYN 407 (489)
Q Consensus 340 -------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~----~~-~~~~~~~~~ 407 (489)
...++++.++.++..++.+ ++.+++++++.+++++.|+++ +.+.+.. .+ .++++.+..
T Consensus 220 ~~~~~g~~~~~~~~~aa~~l~~l~~l---------~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~ 289 (394)
T 1o69_A 220 EHLDYGYNYRLSNVLGAIGVAQMEVL---------EQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINF 289 (394)
T ss_dssp CCSSCCCBCBCCHHHHHHHHHHHTTH---------HHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESC
T ss_pred cccccCcccCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecc
Confidence 0125777777777666644 567899999999999999988 6655432 12 256666653
Q ss_pred C---------------------CcHHHHHHHHhhCCceEEeecCCC--cCCCC---------------CeEEEeecCCCC
Q 046230 408 P---------------------AKIPAFSRECLRQNVAVVTVAFPA--TPLLL---------------ARARICISASHT 449 (489)
Q Consensus 408 ~---------------------~~~~~~~~~l~~~Gi~v~~~~~p~--~~~~~---------------~~iRi~~~~~~t 449 (489)
. ....++.+.|.++||.+.+...|. .|... ..+++.....+|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 369 (394)
T 1o69_A 290 DKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMS 369 (394)
T ss_dssp CGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCC
T ss_pred hhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCC
Confidence 2 156689999999999998653331 11100 345565677899
Q ss_pred HHHHHHHHHHHHHHHH
Q 046230 450 KEDLIKALEVISRVGD 465 (489)
Q Consensus 450 ~edid~~l~~l~~~~~ 465 (489)
++|+++++++|+++++
T Consensus 370 ~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 370 KDDVYEISKLILKSIK 385 (394)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 181
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.94 E-value=3.9e-25 Score=224.07 Aligned_cols=282 Identities=14% Similarity=0.141 Sum_probs=214.5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
.+...+++++||++++.++.+++++|++++..++.++.++|+.|++..+.|+++...+ ...|.++..++.+|+++|
T Consensus 65 ~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 144 (392)
T 3qhx_A 65 NPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAV 144 (392)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHH
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHH
Confidence 5667899999999999999999999999998889888999999999999999877665 567999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++++++ ++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.+... ...+..+
T Consensus 145 ~~~i~~-------------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-------~~~~~~~- 203 (392)
T 3qhx_A 145 RAAIRP-------------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-------QPLSLGA- 203 (392)
T ss_dssp HHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-------CGGGGTC-
T ss_pred HHhhCC-------------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-------ChHHhCC-
Confidence 988754 4567789999999999999999999999999999999999843221 1223333
Q ss_pred CccEEEcccccccCCc----ceEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
|+++.|++|.+|+. ||+++++ +++++.+...... ++...+|..+++++..++.+ ..+.++..
T Consensus 204 --di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~--~g~~~~~~~~~~~~~~l~~l---------~~~~~~~~ 270 (392)
T 3qhx_A 204 --DVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNG--AGAVPGPFDAYLTMRGLKTL---------VLRMQRHS 270 (392)
T ss_dssp --SEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHTTH---------HHHHHHHH
T ss_pred --cEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhhHH---------HHHHHHHH
Confidence 99999999999875 4888887 6888877655432 34458898888888877744 56678888
Q ss_pred HHHHHHHHHHHhC-CCe-eeC----------------CCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeec------C
Q 046230 376 ENSNFFRSELQKM-GFE-VLG----------------DNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVA------F 430 (489)
Q Consensus 376 ~~~~~l~~~L~~~-g~~-v~~----------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~------~ 430 (489)
++.+.+.+.|++. ++. +.. ...+.++++.+... .....|.+.|...|+.+...+ .
T Consensus 271 ~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~ 350 (392)
T 3qhx_A 271 ENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEH 350 (392)
T ss_dssp HHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEEC
T ss_pred HHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeC
Confidence 8889999999876 221 211 11256788887652 445677777776666654322 1
Q ss_pred CCc-----------CCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 431 PAT-----------PLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 431 p~~-----------~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
|.. ....+.+||+++...++++++.+.++|
T Consensus 351 ~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 351 PSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp GGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred cccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 211 124678999998777777666666554
No 182
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.94 E-value=1.2e-25 Score=234.07 Aligned_cols=336 Identities=18% Similarity=0.167 Sum_probs=227.1
Q ss_pred eeEecc-cccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCc---chhHHHHHHHHHHHhCCCC-----EEEeCcc
Q 046230 101 RCLNLG-SYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGT---LMVHNELEECVARFVGKPA-----AIVFGMG 170 (489)
Q Consensus 101 ~~id~~-s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~---~~~~~~l~~~la~~~g~~~-----~i~~~sG 170 (489)
..|+|. |.++ .++.+.+++.+.+.+ |..+..+.+...|. ..+..++++++++++|.+. .++++||
T Consensus 45 ~~i~L~a~e~~-----~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sG 119 (483)
T 1rv3_A 45 VGLELIASENF-----ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSG 119 (483)
T ss_dssp SSEECCTTCCC-----CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSH
T ss_pred cCeEEEcCCCC-----CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCc
Confidence 467773 3332 257888888877765 32222222222221 2233445588999999762 4888999
Q ss_pred HHHHHHhHhhhcCCCCEEEEcCCCchHHHH--------HHHhcC--CeEEEecC------CCHHHHHHHHHHHHhcCCCC
Q 046230 171 YVTNSAILPVLMRKGSLIISDSLNHNSIVN--------GARGSG--ATIRVFQH------NTPSHLEEVLREQIAEGQPR 234 (489)
Q Consensus 171 ~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~--------~~~~~g--~~~~~~~~------~d~~~Le~~l~~~~~~g~~~ 234 (489)
+++|..++.++.++||.|++..+.|+++.. ++..+| ...++++. .|+++|++++.+.
T Consensus 120 s~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~------- 192 (483)
T 1rv3_A 120 SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLF------- 192 (483)
T ss_dssp HHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhc-------
Confidence 988888888999999999999998887643 223334 45555532 2889999999742
Q ss_pred CCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccccc-
Q 046230 235 THRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSF- 313 (489)
Q Consensus 235 ~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~- 313 (489)
+.+ +|++ +..+++ .+.++++|+++|+++|++||+|++|..|.+.. |.... .++ ..|+++.|++|+|
T Consensus 193 ----~tk-lIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~-~~~~~-p~~----~~div~~s~~K~l~ 259 (483)
T 1rv3_A 193 ----HPK-LIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA-GVVPS-PFE----HCHVVTTTTHKTLR 259 (483)
T ss_dssp ----CCS-EEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH-TSSCC-GGG----TCSEEEEESSGGGC
T ss_pred ----CCc-EEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc-CCCCC-CCC----CCcEEEecCcccCC
Confidence 344 4445 555655 78899999999999999999999998654321 11100 011 4589999999998
Q ss_pred CCcceEEEeCHH---------------HHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 314 GSCGGYIAGSKE---------------LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 314 g~~GG~i~~~~~---------------~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
|+.||+++++++ +.+.+........ ..+.+...+++..++++.+. ..+.++.++++.++.
T Consensus 260 GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~-~g~~~~~~iaal~~Al~~~~----~~~~~~~~~~~~~~~ 334 (483)
T 1rv3_A 260 GCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGL-QGGPHNHAIAGVAVALKQAM----TPEFKEYQRQVVANC 334 (483)
T ss_dssp CCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTT-CCSCCHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHH
T ss_pred CCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcc-cCCccHHHHHHHHHHHHHHh----ChhHHHHHHHHHHHH
Confidence 555799988764 3444433222211 22345556666667777662 224578889999999
Q ss_pred HHHHHHHHhCCCeeeCCC-CCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCC--CcCCCCCeEEEeecCCCC----H
Q 046230 379 NFFRSELQKMGFEVLGDN-DSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFP--ATPLLLARARICISASHT----K 450 (489)
Q Consensus 379 ~~l~~~L~~~g~~v~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p--~~~~~~~~iRi~~~~~~t----~ 450 (489)
+++.+.|+++|+.+..+. .++++++.+.. .....++.+.|.+.||.+.....| ..+.+.+.+||+++..+| +
T Consensus 335 ~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ 414 (483)
T 1rv3_A 335 RALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLE 414 (483)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCH
T ss_pred HHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCH
Confidence 999999999999887543 34566666543 235677888888889999832112 123456799999986556 9
Q ss_pred HHHHHHHHHHHHHHHH
Q 046230 451 EDLIKALEVISRVGDL 466 (489)
Q Consensus 451 edid~~l~~l~~~~~~ 466 (489)
+|+++++++|.++++.
T Consensus 415 edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 415 KDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999876
No 183
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.94 E-value=5.6e-25 Score=227.99 Aligned_cols=336 Identities=15% Similarity=0.127 Sum_probs=219.6
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAIL 178 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~ 178 (489)
|+.||||.+. ++. |.+.+++.+++.. +. ..++..+...+++++++++++.++.+++++|++|+..++
T Consensus 40 ~~~ylD~~~~----~~~--~~v~~a~~~~l~~-~~------~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 40 EDVFIDLLTD----SGT--GAVTQSMQAAMMR-GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYI 106 (467)
T ss_dssp GGCSEECSCC----SSC--SCCCHHHHHHTTS-CC------CCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHH
T ss_pred CCeeEecccC----CCc--HHHHHHHHHHhcc-Cc------ceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHH
Confidence 6789999633 322 6889999888753 21 122345566899999999999988888899999998888
Q ss_pred hhhcCC-----C----CEEEEcCCCchHH-HHHHHhcCCeEEEe------c------C---CCHHHHHHHHHHHHhcCCC
Q 046230 179 PVLMRK-----G----SLIISDSLNHNSI-VNGARGSGATIRVF------Q------H---NTPSHLEEVLREQIAEGQP 233 (489)
Q Consensus 179 ~al~~~-----g----~~Vl~~~~~h~~~-~~~~~~~g~~~~~~------~------~---~d~~~Le~~l~~~~~~g~~ 233 (489)
.++.++ | |.|+.. .+|+.. .......++.+... + . .|+++|++++++..
T Consensus 107 ~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~----- 180 (467)
T 2oqx_A 107 PVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG----- 180 (467)
T ss_dssp HHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC-----
T ss_pred HHHhccccccCCCCccceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC-----
Confidence 887766 7 777776 566443 33344455554431 1 1 17899999997520
Q ss_pred CCCCCCccEEEEEcCcCCCC-CCCCC---hHHHHHHHHHcCcEEEEEccccc-ccc-------cCCCCcccccc--CCCC
Q 046230 234 RTHRPWKKIMVIVEGIYSME-GELCK---FPEIIAICKKYKAYIYLDEAHSI-GAV-------GKTGRGVCELL--EVDT 299 (489)
Q Consensus 234 ~~~~~~~~~~vive~v~s~~-G~~~~---l~~i~~l~~~~~~~li~DEa~s~-g~~-------g~~G~~~~~~~--~v~p 299 (489)
+.++++|+++++++++ |.+.+ +++|+++|++||++||+|++|.+ +.+ +..|....... ..
T Consensus 181 ----~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~-- 254 (467)
T 2oqx_A 181 ----PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETY-- 254 (467)
T ss_dssp ----GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHG--
T ss_pred ----CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhh--
Confidence 0145678888888876 76644 88999999999999999999875 332 44444322111 00
Q ss_pred CCccEEEcccccccCCc-ceEEEeCHH-HHHH---HHhh---CCCc-ccccCCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 300 ADVDIMMGTFTKSFGSC-GGYIAGSKE-LIQY---LKYT---CPAH-LYATSISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~-GG~i~~~~~-~~~~---l~~~---~~~~-~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
...|+++.|++|++|.+ ||+++++++ +++. ++.. ..+. .++ ..+...+++....++.. ..++.
T Consensus 255 ~~~d~~~~s~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~l~~~-------~~~~~ 326 (467)
T 2oqx_A 255 KYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDG-------MNLDW 326 (467)
T ss_dssp GGCSEEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC-CCCHHHHHHHHHHHHHT-------TCHHH
T ss_pred ccCCeEEEecccccCCCCceEEEecChhHHHHHHHHHHhhhccCCccccc-chhhhHHHHHHHhhHhh-------hhHHH
Confidence 11267778999999876 788888766 4443 3322 1111 111 12222222222222321 11345
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC---CCc-----HHHHHHHH-hhCCceEEeecC------C----
Q 046230 371 LARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN---PAK-----IPAFSREC-LRQNVAVVTVAF------P---- 431 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~---~~~-----~~~~~~~l-~~~Gi~v~~~~~------p---- 431 (489)
+++..++++++.+.|+++|+++. +.++.++++.+.. ... ..++++.| .++||.+.+.+. |
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~ 405 (467)
T 2oqx_A 327 LAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGK 405 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccc
Confidence 66678889999999999888777 6667777777631 111 45568888 788999987331 1
Q ss_pred CcCCCCCeEEEeecCC-CCHHHHHHHHHHHHHHHHHhC
Q 046230 432 ATPLLLARARICISAS-HTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~~ 468 (489)
..+...+++||+++.. +|++||++++++|++++++..
T Consensus 406 ~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 0112347999999988 999999999999999987653
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=1.5e-24 Score=221.29 Aligned_cols=281 Identities=18% Similarity=0.217 Sum_probs=211.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
.+...+++++++++++.++.+++++|++++..++.++.++|+.|+++.+.|+++...+ +..|.+++.++.+ +++|
T Consensus 55 ~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l 133 (412)
T 2cb1_A 55 DPTAKALEERLKALEGALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAV 133 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHH
Confidence 4678999999999999998888899999998888888899999999999999877654 3468888888765 7888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+++ ++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.+ +.... ..+.
T Consensus 134 ~~~i~~-------------~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~--~~~~~----~~~~--- 191 (412)
T 2cb1_A 134 REALSA-------------KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAA--GALCR----PLAW--- 191 (412)
T ss_dssp HHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTT--TTSCC----GGGG---
T ss_pred HHHhcc-------------CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccc--cccCC----cccc---
Confidence 877643 4567788999999999999999999999999999999999844 21111 1222
Q ss_pred CccEEEcccccccCCcc----eEEEeCH---------------------------HHHHHHHhhCCCcccccCCCHHHHH
Q 046230 301 DVDIMMGTFTKSFGSCG----GYIAGSK---------------------------ELIQYLKYTCPAHLYATSISPPAAE 349 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~G----G~i~~~~---------------------------~~~~~l~~~~~~~~~~~~~~p~~~a 349 (489)
++|+++.|++|+++++| |+++.++ ++.+.++.... ..++..++|..++
T Consensus 192 ~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~~~g~~~~~~~a~ 270 (412)
T 2cb1_A 192 GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-SLCGMALSPFNAY 270 (412)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-TTTCCCCCHHHHH
T ss_pred CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-HhcCCCCChHHhH
Confidence 24999999999997644 4445552 44555554321 1123347888888
Q ss_pred HHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeee-CC----------------CCCCeEEEEeCCCCcH
Q 046230 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVL-GD----------------NDSPVMPIMLYNPAKI 411 (489)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~-~~----------------~~~~~~~~~~~~~~~~ 411 (489)
.+...++.+ +.+.++..++.+++.+.|.+. ++.++ .+ ..+.++.+.+ . ..
T Consensus 271 ~~~~~l~~l---------~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~--~~ 338 (412)
T 2cb1_A 271 LLFQGLETV---------ALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G--DL 338 (412)
T ss_dssp HHHHHGGGH---------HHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S--SH
T ss_pred HHHcCCchH---------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C--CH
Confidence 877777644 566777888999999999987 66533 11 2466888887 3 45
Q ss_pred HHHHHHHhhCCceEEee---------cCCCcCC--------------CCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 412 PAFSRECLRQNVAVVTV---------AFPATPL--------------LLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~---------~~p~~~~--------------~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
..+.+.|.+.||.+ .. ..|+.+. ..+.+|++++..+++++++.+.++|++
T Consensus 339 ~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 339 ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 66777777789998 54 2443211 158999999999999999999998864
No 185
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.94 E-value=2.5e-24 Score=225.38 Aligned_cols=346 Identities=15% Similarity=0.155 Sum_probs=225.9
Q ss_pred ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC----CEEEeCccHHHHHHhHhh
Q 046230 106 GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP----AAIVFGMGYVTNSAILPV 180 (489)
Q Consensus 106 ~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~~~a 180 (489)
.+..|+|+-...+.....+.+.+.. ++.+...+....+...+..++.+.+++++|.+ ..+++++|+++|..++.+
T Consensus 94 ~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~ 173 (511)
T 3vp6_A 94 GHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMA 173 (511)
T ss_dssp TSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHH
T ss_pred CCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHH
Confidence 4455566554433333333444433 22222222122233444455555667777765 345667888988665555
Q ss_pred hcC--------------CCCEEEEcCCCchHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCC
Q 046230 181 LMR--------------KGSLIISDSLNHNSIVNGARGSGA---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 181 l~~--------------~g~~Vl~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
+.. +++.|+++...|.++..+++..|. .++.++.+ |+++|+++|++...+|
T Consensus 174 a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g------- 246 (511)
T 3vp6_A 174 ARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKG------- 246 (511)
T ss_dssp HHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTT-------
T ss_pred HHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcC-------
Confidence 433 577999999999999999999998 88888876 8999999998754443
Q ss_pred CccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCC-CCccccccCCCCCCccEEEcccccccCCc-
Q 046230 239 WKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKT-GRGVCELLEVDTADVDIMMGTFTKSFGSC- 316 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~-G~~~~~~~~v~p~~~Di~~~t~sK~~g~~- 316 (489)
..+.+|++....+++|.+.|+++|.++|++||+++++|++|+.|.+... .+. ...|+ ..+|+++.+.+|+|+.+
T Consensus 247 ~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~--~~~g~--~~aDsv~~~~hK~l~~p~ 322 (511)
T 3vp6_A 247 YVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH--KLNGI--ERANSVTWNPHKMMGVLL 322 (511)
T ss_dssp CEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG--GGTTG--GGCSEEEECTTSTTCCCS
T ss_pred CCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhh--hccCC--ccCCEEEECcccccCCCc
Confidence 2356777788889999999999999999999999999999996654211 111 11122 24499999999998643
Q ss_pred c-eEEEe-CHHHHHHHHhhCCCcccccC----------------CCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Q 046230 317 G-GYIAG-SKELIQYLKYTCPAHLYATS----------------ISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 317 G-G~i~~-~~~~~~~l~~~~~~~~~~~~----------------~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (489)
| |+++. ++++++........+.+... ..+..+.++.++|+.+ +....+++++++.++.
T Consensus 323 g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~----g~~gl~~~~~~~~~~a 398 (511)
T 3vp6_A 323 QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK----GTVGFENQINKCLELA 398 (511)
T ss_dssp CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH----hHHHHHHHHHHHHHHH
Confidence 4 66555 55555554332222221110 1112234444555544 1225688999999999
Q ss_pred HHHHHHHHhC-CCeeeC--CCCCCeEEEEeCCCC----------------cHHHHHHHHhhCCceEEeecCCCcCCCCCe
Q 046230 379 NFFRSELQKM-GFEVLG--DNDSPVMPIMLYNPA----------------KIPAFSRECLRQNVAVVTVAFPATPLLLAR 439 (489)
Q Consensus 379 ~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~ 439 (489)
+++++.|++. |+++.. .+..+++.+.+.... ...++.+.|+++|+.+.. ++..+.+.++
T Consensus 399 ~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~--~~~~~~~~~~ 476 (511)
T 3vp6_A 399 EYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG--YQPQGDKANF 476 (511)
T ss_dssp HHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE--EEEETTEEEE
T ss_pred HHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE--EEEeCCceEE
Confidence 9999999998 898876 455666666543211 123688999999977664 1111223357
Q ss_pred EEEee-cCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 440 ARICI-SASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 440 iRi~~-~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
+|+++ +..+|++||+.++++|+++.+.+.
T Consensus 477 lRi~~~~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 477 FRMVISNPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp EEECCCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 99998 688999999999999999877653
No 186
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=1.5e-25 Score=225.08 Aligned_cols=300 Identities=16% Similarity=0.175 Sum_probs=222.3
Q ss_pred ccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCCCch
Q 046230 118 EYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHN 196 (489)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~~h~ 196 (489)
|++.+++.+++.... ++..+...++++.+|++++.+..+++++|++++..++.++ .++|+.|+++.++|.
T Consensus 16 ~~v~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~ 86 (367)
T 3nyt_A 16 DKIDAGIQRVLRHGQ---------YILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYV 86 (367)
T ss_dssp HHHHHHHHHHHHHCC---------CSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCT
T ss_pred HHHHHHHHHHHhcCC---------ccCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccH
Confidence 455566666555421 1234567899999999999998899999999998888888 789999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 046230 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270 (489)
Q Consensus 197 ~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~ 270 (489)
++...+...|++++.++.+ |+++|++++++ ++.+|+ +.+++|...++++|.++|++||
T Consensus 87 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~-------------~~~~v~---~~~~~G~~~~~~~i~~la~~~~ 150 (367)
T 3nyt_A 87 ATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP-------------RTKAII---PVSLYGQCADFDAINAIASKYG 150 (367)
T ss_dssp HHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT-------------TEEEEC---CBCGGGCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc-------------CCcEEE---eeCCccChhhHHHHHHHHHHcC
Confidence 9999999999999988754 78888887743 344555 3346788999999999999999
Q ss_pred cEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCCcc--eEEEe-CHHHHHHHHhhCCCc--------
Q 046230 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGSCG--GYIAG-SKELIQYLKYTCPAH-------- 337 (489)
Q Consensus 271 ~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~~G--G~i~~-~~~~~~~l~~~~~~~-------- 337 (489)
++||+||+|+.|.. ..|+. .+.-. |+++.|| +|.+|+.| |++++ ++++++.++......
T Consensus 151 ~~li~D~a~~~g~~-~~~~~----~~~~~---di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~ 222 (367)
T 3nyt_A 151 IPVIEDAAQSFGAS-YKGKR----SCNLS---TVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHI 222 (367)
T ss_dssp CCBEEECTTTTTCE-ETTEE----TTSSS---SEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEEC
T ss_pred CEEEEECccccCCe-ECCee----ccCCC---CEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceee
Confidence 99999999986644 23332 12212 7888887 79998754 88887 577887776543210
Q ss_pred --ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC-----CCeEEEEeCCCCc
Q 046230 338 --LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDND-----SPVMPIMLYNPAK 410 (489)
Q Consensus 338 --~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~-----~~~~~~~~~~~~~ 410 (489)
.+...++++.++++++.++.+ ++..++.+++.+++++.|+++++.+..... ..++++.+. .
T Consensus 223 ~~g~~~~~~~~~aa~~~~~l~~~---------~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (367)
T 3nyt_A 223 RVGVNSRLDTLQAAILLPKLEIF---------EEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---N 290 (367)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---S
T ss_pred ccCcCCCccHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---C
Confidence 123458999999998888754 567788888999999999998765432211 123344332 5
Q ss_pred HHHHHHHHhhCCceEEeecCC-Cc---C-C-------------CCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 411 IPAFSRECLRQNVAVVTVAFP-AT---P-L-------------LLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~p-~~---~-~-------------~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
..++.+.|.++||.+.+ .|+ .. | . ....+|+.+....|++|++++++.+.+.
T Consensus 291 ~~~l~~~L~~~GI~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 291 RESVQASLKAAGVPTAV-HYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHHHHHTCCCBC-SCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCceec-cCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 67899999999998874 333 11 0 0 1347899999999999999999998754
No 187
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.94 E-value=1.1e-25 Score=236.78 Aligned_cols=334 Identities=14% Similarity=0.079 Sum_probs=224.5
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh----CC------CCEEEeCcc
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV----GK------PAAIVFGMG 170 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~------~~~i~~~sG 170 (489)
.++||+.+. .+++ +|.+++++.+++...... ....|. .++++.+++++ +. ++.+++++|
T Consensus 104 ~~i~l~~g~-~~~~--~~~~v~a~~~~~~~~~y~----~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G 172 (533)
T 3f6t_A 104 DAVNYCHTE-LGLN--RDKVVAEWVNGAVANNYP----VPDRCL----VNTEKIINYFLQELSYKDANLAEQTDLFPTEG 172 (533)
T ss_dssp HHHHHHHHT-TCCC--HHHHHHHHHHHHHTCSCC----SSSSCC----HHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEH
T ss_pred hheeccCCC-CCcC--CcHHHHHHHHHHHhCCCC----CCcccH----HHHHHHHHHHHHHhcCCCCCCCCcceEEEECC
Confidence 467776444 3333 577888888887652111 012244 45666666654 32 246666555
Q ss_pred -HHHHHHhHhh-----hcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC---------CHHHHHHHHHHHHhcCCCCC
Q 046230 171 -YVTNSAILPV-----LMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---------TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 171 -~~a~~~~~~a-----l~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~~~Le~~l~~~~~~g~~~~ 235 (489)
++++..++.+ +.++||.|+++.++|.++...++..|+.++.++.+ |+++|++.+..
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~--------- 243 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP--------- 243 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT---------
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC---------
Confidence 5555777776 78899999999999999999999999998888763 67888877643
Q ss_pred CCCCccEEEEEcCcCCCCCCCCChH---HHHHHHH-HcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccccc
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCKFP---EIIAICK-KYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTK 311 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~l~---~i~~l~~-~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK 311 (489)
..+ +|++..+++++|.+.+.+ +|+++|+ +||+++|+||+|+ .+...+..... .. .+.+|+++||||
T Consensus 244 ---~~k-~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~--~~~~~~~~~~~---~~-~~~~i~~~S~SK 313 (533)
T 3f6t_A 244 ---SIK-ALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG--AFVPNFKSIYS---VV-PYNTMLVYSYSK 313 (533)
T ss_dssp ---TEE-EEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG--GGSTTCCCHHH---HS-GGGEEEEEESHH
T ss_pred ---CCe-EEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc--ccccCccCHhh---cC-CCCEEEEecCcc
Confidence 234 455557789999997754 8888888 6899999999999 66654333221 22 244699999999
Q ss_pred ccCCcc---eEEEeCHH-----HHHHH--------------------------------HhhCCCcccccCCCHHHHHH-
Q 046230 312 SFGSCG---GYIAGSKE-----LIQYL--------------------------------KYTCPAHLYATSISPPAAEQ- 350 (489)
Q Consensus 312 ~~g~~G---G~i~~~~~-----~~~~l--------------------------------~~~~~~~~~~~~~~p~~~aa- 350 (489)
.+|.+| ||++++++ +++.+ +..... .+.+.+++.+++
T Consensus 314 ~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~--~~~~~~~~~q~a~ 391 (533)
T 3f6t_A 314 LFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLY--HTAGLSTPQQIME 391 (533)
T ss_dssp HHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTG--GGCSCCHHHHHHH
T ss_pred cCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHh--cccCCChHHHHHH
Confidence 999889 99998765 43322 222222 222355554444
Q ss_pred HHHHHHHHHc----cCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC------C----------Cc
Q 046230 351 IISAIKVILG----EDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN------P----------AK 410 (489)
Q Consensus 351 ~~a~L~~i~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~------~----------~~ 410 (489)
++.++..+.. +....+.++.+++++++.+++.+.|. +++.+..+.+++++++.+.. . ..
T Consensus 392 a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~ 470 (533)
T 3f6t_A 392 ALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFE 470 (533)
T ss_dssp HHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCC
Confidence 2224444420 11233567888899999999999997 88776666667766665532 0 23
Q ss_pred HHHHHHHHh-hCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 411 IPAFSRECL-RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 411 ~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
..++...++ ++||.+.+...+.. +.+++||+++ .++++++++++++|.++++++..+
T Consensus 471 ~~~~~~~ll~~~GV~v~pg~~f~~--~~~~iRls~a-~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 471 QVDFLLKLAEKNGVVLVDGVGFGA--KPGELRVSQA-NLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp HHHHHHHHHHHTTSSSCTTEEECS--STTEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCCcccCC--CCCEEEEEEe-eCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445666665 66999997443333 2579999983 579999999999999999876543
No 188
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.94 E-value=4.4e-25 Score=227.71 Aligned_cols=333 Identities=15% Similarity=0.091 Sum_probs=226.1
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhC----CCCCCcccCCCcchhHHHHHHHHHHHh-CCC------CEEE---
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYS----PSTCSSRVDGGTLMVHNELEECVARFV-GKP------AAIV--- 166 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~----~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~------~~i~--- 166 (489)
..|||+.+.|+.+... +.+.+++.+++.+.. .....+....| ..++++.+++++ |.+ +.++
T Consensus 50 ~~i~l~~g~~~d~~~~-~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G----~~~lr~~ia~~l~g~~~~~~~~~~i~~~~ 124 (448)
T 3meb_A 50 KKVNLGVGAYRDESGK-PWILPAVKEAEAIISSDLSKYNKEYPPVAG----FPLFLEAAQFLMFGKDSKAAQEGRIASCQ 124 (448)
T ss_dssp TCEEESSCCCCCTTSC-CCCCHHHHHHHHHHHHCTTTTCCSCCCTTC----CHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CeEEeecccccCCCCC-EechHHHHHHHHHHhhcccCCCCCCCCCcc----hHHHHHHHHHHhcCCCccccCcCcEEEEE
Confidence 3799998888777644 678888888855432 22222222233 378999999987 654 4444
Q ss_pred eCccHHHHHH--hHhhhcCCCCEEEEcCCCchHHHHHHH----hcCCeEEEecC---C-----CHHHHHHHHHHHHhcCC
Q 046230 167 FGMGYVTNSA--ILPVLMRKGSLIISDSLNHNSIVNGAR----GSGATIRVFQH---N-----TPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 167 ~~sG~~a~~~--~~~al~~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~~---~-----d~~~Le~~l~~~~~~g~ 232 (489)
+++|++++.. .+.++..+|+.|+++.++|..+...++ ..|++++.++. + |+++|++.+++.
T Consensus 125 t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~----- 199 (448)
T 3meb_A 125 SLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSA----- 199 (448)
T ss_dssp ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHS-----
T ss_pred CCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhC-----
Confidence 5666777743 456677899999999999999999999 89999888876 2 778888888752
Q ss_pred CCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC----c-cccccCCCCCCccE
Q 046230 233 PRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR----G-VCELLEVDTADVDI 304 (489)
Q Consensus 233 ~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~----~-~~~~~~v~p~~~Di 304 (489)
+.++.++++...+|++|.+.+ +++|+++|++||+++|+||+|. .++..+. . .....+.. +..|
T Consensus 200 -----~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~--~~~~~~~~~~~~~~~~~~~~~--~~~i 270 (448)
T 3meb_A 200 -----PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQ--GFATGSFEADAFAVRMFVDAG--VEVL 270 (448)
T ss_dssp -----CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT--TTSSSCHHHHTHHHHHHHHTT--CCEE
T ss_pred -----CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccc--cccCCCcccCchhHHHHhhcC--CcEE
Confidence 124667788888999998876 6679999999999999999999 7766551 1 11111222 2258
Q ss_pred EEcccccccCCcc---eEE--Ee---------CH----HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH-ccCCCc
Q 046230 305 MMGTFTKSFGSCG---GYI--AG---------SK----ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVIL-GEDGSS 365 (489)
Q Consensus 305 ~~~t~sK~~g~~G---G~i--~~---------~~----~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~ 365 (489)
+++||||.||.+| ||+ ++ ++ ++++.+........ .+.+.+.+.++.+.|+... ......
T Consensus 271 ~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~l~~~~~~ 348 (448)
T 3meb_A 271 VAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTW--SMSAIHGAYIVQVIVHDKRLLQMFYD 348 (448)
T ss_dssp EEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTT--SSCCHHHHHHHHHHHTSHHHHHHHHH
T ss_pred EEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhccc--CCccHHHHHHHHHHhcChHHHHHHHH
Confidence 8899999999888 997 55 35 56666554322211 2255566666666553210 000001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC---------CeeeCCCCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEeecCCCcCC
Q 046230 366 RGAQKLARIRENSNFFRSELQKMG---------FEVLGDNDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTVAFPATPL 435 (489)
Q Consensus 366 ~~~~~~~~~~~~~~~l~~~L~~~g---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~ 435 (489)
..++.+++++++.+++.+.|++++ +.+..+..+.+.+..+ . .++...|+ ++||.+.+..
T Consensus 349 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~-~~~~~~ll~~~gV~v~~G~------ 417 (448)
T 3meb_A 349 NVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL----T-PEHVDYLKEKWSIYLVKAG------ 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC----C-HHHHHHHHHHHCEEECSGG------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCC----C-HHHHHHHHHhCCEEEeCCC------
Confidence 356778889999999999999884 3333344454433222 2 35666665 4599998311
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 436 LLARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
.||+++ .+++++|++++++|.+++++++.+
T Consensus 418 ----gRis~a-~~~~~~i~~~~~~l~~~l~~~~~~ 447 (448)
T 3meb_A 418 ----GRMSMC-GLTESNCDYVAEAIHDAVTKLPFK 447 (448)
T ss_dssp ----GEEEGG-GCCTTTHHHHHHHHHHHHHHSCCC
T ss_pred ----cEEEEe-cCCHHHHHHHHHHHHHHHHhcccC
Confidence 399884 557888999999999999876643
No 189
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.94 E-value=1.3e-25 Score=227.63 Aligned_cols=327 Identities=14% Similarity=0.069 Sum_probs=217.8
Q ss_pred ceeEeccccccc---CCCCCCccchHHHHH-HHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCC-------CC--EEE
Q 046230 100 NRCLNLGSYNYL---GFAASDEYCTPRVIE-SLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGK-------PA--AIV 166 (489)
Q Consensus 100 ~~~id~~s~~~l---g~~~~~~~v~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~--~i~ 166 (489)
..+|||+.+.|+ +....+|.+.+++.+ ++.+.+.. .+....|. .++++.++++++. ++ .++
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~--~y~~~~g~----~~lr~~la~~~~~~~~~~~~~~~~~i~ 99 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGAS--LYLPMEGL----NCYRHAIAPLLFGADHPVLKQQRVATI 99 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCC--CCCCTTCC----HHHHHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccc--cCCCCCch----HHHHHHHHHHHhcCCcccccccceEEE
Confidence 458999866443 333224678888887 77653221 11112233 6788888887742 34 566
Q ss_pred eC-ccHHHHHHh--HhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHHHHhcCCCCCC
Q 046230 167 FG-MGYVTNSAI--LPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH----N---TPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 167 ~~-sG~~a~~~~--~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~Le~~l~~~~~~g~~~~~ 236 (489)
++ +|++++..+ +.++.++||.|+++.++|.++...++..|++++.++. + |+++|++.+++.
T Consensus 100 ~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--------- 170 (397)
T 3fsl_A 100 QTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL--------- 170 (397)
T ss_dssp EESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC---------
T ss_pred EcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC---------
Confidence 65 455666666 3456789999999999999999999999999999987 3 889999888642
Q ss_pred CCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC--c--cccccCCCCCCccEEEccc
Q 046230 237 RPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR--G--VCELLEVDTADVDIMMGTF 309 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~--~--~~~~~~v~p~~~Di~~~t~ 309 (489)
+.++.++++.++++++|.+.+ +++|+++|++||++||+||+|+ .+...+. . .....+. .+.+|+++||
T Consensus 171 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~--~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~ 245 (397)
T 3fsl_A 171 -QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ--GFGAGMEEDAYAIRAIASA--GLPALVSNSF 245 (397)
T ss_dssp -CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT--TSSSCTTGGGHHHHHHHHT--TCCEEEEEEC
T ss_pred -CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCch--hhccCcccccHHHHHHHhc--CCCEEEEecc
Confidence 124567888889999999855 6799999999999999999999 5555431 1 2222122 2336889999
Q ss_pred ccccCCcc---eEEEe---CHHHHHHHHhhCCCc-cc-ccCCCHHHHHHHHHHHHHH--HccCCCchHHHHHHHHHHHHH
Q 046230 310 TKSFGSCG---GYIAG---SKELIQYLKYTCPAH-LY-ATSISPPAAEQIISAIKVI--LGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 310 sK~~g~~G---G~i~~---~~~~~~~l~~~~~~~-~~-~~~~~p~~~aa~~a~L~~i--~~~~~~~~~~~~~~~~~~~~~ 379 (489)
||.+|.+| ||++. ++++++.+....... .. ..+.+++.++++.+.|+.- .. ....+.++.+++++++.+
T Consensus 246 SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~~ 324 (397)
T 3fsl_A 246 SKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKA-SWLKEVEEMRTRILAMRQ 324 (397)
T ss_dssp TTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999778 99864 566665443211000 01 1123445555554444310 00 001145778889999999
Q ss_pred HHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHH
Q 046230 380 FFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIK 455 (489)
Q Consensus 380 ~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~ 455 (489)
++.+.|+++ |+.+..+..+.++++.+ ....+.+.|.++||.+.+. + ||+++ .+++++|++
T Consensus 325 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g-------~----Ris~~-~~~~~~i~~ 388 (397)
T 3fsl_A 325 ELVKVLSTEMPERNFDYLLNQRGMFSYTGL----SAAQVDRLREEFGVYLIAS-------G----RMCVA-GLNTANVQR 388 (397)
T ss_dssp HHHHHHHHHCTTSCCTHHHHCCSSEEECCC----CHHHHHHHHHTTCEECCTT-------C----EEEGG-GCCTTTHHH
T ss_pred HHHHHHHhcCCCCCceeecCCceEEEecCC----CHHHHHHHHHhCCEEECCC-------C----eEEEE-ecCHhhHHH
Confidence 999999987 56665555565544322 3455667777889999831 1 88885 557788999
Q ss_pred HHHHHHHH
Q 046230 456 ALEVISRV 463 (489)
Q Consensus 456 ~l~~l~~~ 463 (489)
++++|+++
T Consensus 389 ~~~~l~~~ 396 (397)
T 3fsl_A 389 VAKAFAAV 396 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999875
No 190
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=1.5e-24 Score=221.99 Aligned_cols=308 Identities=15% Similarity=0.146 Sum_probs=222.0
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCc-chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCc
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGT-LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNH 195 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h 195 (489)
++.+.+++.++++. +. ++. .....++++.++++++.+..+++++|++++..++.++. +|+.|+++.++|
T Consensus 31 p~~~~~a~~~~~~~-~~--------y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~ 100 (424)
T 2po3_A 31 RARLYERLDRALDS-QW--------LSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTF 100 (424)
T ss_dssp HHHHHHHHHHHHHH-TC--------CSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSC
T ss_pred hHHHHHHHHHHHhc-CC--------cccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCcc
Confidence 35788888888865 21 122 46678999999999999877777888899888888875 689999999999
Q ss_pred hHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc
Q 046230 196 NSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY 269 (489)
Q Consensus 196 ~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~ 269 (489)
.++...+...|++++.++.+ |+++|++.+++ +.++++++. ++|...++++|.++|++|
T Consensus 101 ~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------------~~~~v~~~~----~tG~~~~l~~i~~la~~~ 164 (424)
T 2po3_A 101 AATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP------------RTSAVVGVH----LWGRPCAADQLRKVADEH 164 (424)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT------------TEEEEEEEC----GGGCCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc------------CCcEEEEEC----CCCCcCCHHHHHHHHHHc
Confidence 99999999999999988765 67777766542 234444432 578889999999999999
Q ss_pred CcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc--cccCCc-ceEEEeC-HHHHHHHHhhCCC-c--c----
Q 046230 270 KAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT--KSFGSC-GGYIAGS-KELIQYLKYTCPA-H--L---- 338 (489)
Q Consensus 270 ~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s--K~~g~~-GG~i~~~-~~~~~~l~~~~~~-~--~---- 338 (489)
|++||+||+|+.|.. .+|... +.-+ |+++.||+ |++++. ||+++++ +++++.+...... . .
T Consensus 165 ~~~li~Dea~~~g~~-~~~~~~----~~~~---di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~ 236 (424)
T 2po3_A 165 GLRLYFDAAHALGCA-VDGRPA----GSLG---DAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSP 236 (424)
T ss_dssp TCEEEEECTTCTTCE-ETTEET----TSSS---SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCT
T ss_pred CCEEEEECccccCCe-ECCeec----cccc---CEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCcccccccc
Confidence 999999999996543 444321 1113 78888998 888652 3999998 8888877643211 0 0
Q ss_pred ---cccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC-CC----CCeEEEEeCC--
Q 046230 339 ---YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGD-ND----SPVMPIMLYN-- 407 (489)
Q Consensus 339 ---~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~-~~----~~~~~~~~~~-- 407 (489)
....+++..+++++..++.+ ++..++.+++.+++++.|+++ |+.+... .+ ..++++.+..
T Consensus 237 ~~g~~~~~~~~~aa~~l~~~~~~---------~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 307 (424)
T 2po3_A 237 AGGTNAKMSEAAAAMGLTSLDAF---------PEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEAT 307 (424)
T ss_dssp TCCCBCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHH
T ss_pred ccCcCCCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCcc
Confidence 11135677777777665543 567888888999999999887 7777652 22 1455565543
Q ss_pred -CCcHHHHHHHHhhCCceEEeecCCCcC-------C----C-------CCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 408 -PAKIPAFSRECLRQNVAVVTVAFPATP-------L----L-------LARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 408 -~~~~~~~~~~l~~~Gi~v~~~~~p~~~-------~----~-------~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.....++.+.|.++||.+.+...+... . . ...+|+.+...+|++|+++++++|.++++..
T Consensus 308 ~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 308 TGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 345778999999999999862221110 0 0 1127777668999999999999999887654
No 191
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=3.1e-24 Score=217.14 Aligned_cols=308 Identities=14% Similarity=0.133 Sum_probs=223.9
Q ss_pred cCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhh-------cC
Q 046230 111 LGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-------MR 183 (489)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al-------~~ 183 (489)
++.+.-++++.+++.+++.+... ...+...++++.+|++++.++.+++++|++++..++.++ .+
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~---------~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~ 78 (390)
T 3b8x_A 8 LASSTWDDLEYKAIQSVLDSKMF---------TMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLK 78 (390)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTCC---------SSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCC
T ss_pred CCCCCCCHHHHHHHHHHHHcCCC---------CCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCC
Confidence 44444478899999998876211 235667899999999999998999999999998888887 67
Q ss_pred CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCC
Q 046230 184 KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257 (489)
Q Consensus 184 ~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~ 257 (489)
+|+.|+++.+.|.++...++..|++++.++.+ |+++|++.+++ +.+++++++ +.|...
T Consensus 79 ~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~------------~~~~v~~~~----~~g~~~ 142 (390)
T 3b8x_A 79 KGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD------------STKAILTVN----LLGNPN 142 (390)
T ss_dssp TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT------------TEEEEEEEC----GGGCCC
T ss_pred CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc------------CCeEEEEEC----CccChh
Confidence 89999999999999999999999999988765 78888887753 244444443 356778
Q ss_pred ChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccC-CcceEEEeCH-HHHHHHHhh
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFG-SCGGYIAGSK-ELIQYLKYT 333 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g-~~GG~i~~~~-~~~~~l~~~ 333 (489)
++++|.++|++||+++|+||+|+.|... .+ ..+|..+ |+...|+ +|.++ +.||++++++ ++.+.++..
T Consensus 143 ~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~----~~~g~~~---~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~ 214 (390)
T 3b8x_A 143 NFDEINKIIGGRDIILLEDNCESMGATF-NN----KCAGTFG---LMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCI 214 (390)
T ss_dssp CHHHHHHHHTTSCCEEEEECTTCTTCEE-TT----EETTSSS---SEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEEECcCcccCEE-CC----ccccccc---ceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999966543 22 2344444 6663232 45553 3468998875 676655432
Q ss_pred CC-C-----------------------c-----ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHH
Q 046230 334 CP-A-----------------------H-----LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSE 384 (489)
Q Consensus 334 ~~-~-----------------------~-----~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (489)
.. + + .+...++++.++++++.|+.+ ++..++.+++.+++.+.
T Consensus 215 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l---------~~~~~~~~~~~~~l~~~ 285 (390)
T 3b8x_A 215 RAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKL---------PRFISVRRKNAEYFLDK 285 (390)
T ss_dssp TBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH
T ss_pred HhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH
Confidence 21 1 0 111237888888888888755 57888899999999999
Q ss_pred HHhC-CCeeeCCC-CC-C-eEEEEeCC--CCcHHHHHHHHhhCCceEEeecCCC---c-CCC------------------
Q 046230 385 LQKM-GFEVLGDN-DS-P-VMPIMLYN--PAKIPAFSRECLRQNVAVVTVAFPA---T-PLL------------------ 436 (489)
Q Consensus 385 L~~~-g~~v~~~~-~~-~-~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~---~-~~~------------------ 436 (489)
|+++ |+.+.... .+ + .+++.+.. .....++.+.|.++||.+.+...+. . |..
T Consensus 286 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (390)
T 3b8x_A 286 FKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLD 365 (390)
T ss_dssp HTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHH
T ss_pred hcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHh
Confidence 9987 77765432 22 2 35555553 3467789999999999988522111 1 110
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHH
Q 046230 437 LARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l 460 (489)
.+.+||+++..+|++|+++++++|
T Consensus 366 ~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 366 KNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHEEEEECCSSCCHHHHHHHHHHT
T ss_pred cCEEEeeCCCCCCHHHHHHHHHhh
Confidence 136999999999999999999876
No 192
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=3.8e-24 Score=216.62 Aligned_cols=279 Identities=15% Similarity=0.192 Sum_probs=208.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|+++|.+++++++||++++..++.++.++|+.|++..+.|+++... ++..|.+++.++.+|++++
T Consensus 58 ~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 137 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKV 137 (389)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHH
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 566789999999999999999999999999888888889999999999999987666 4678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+++ ++.+|+++++.+++|.+.++++|.++|++||+++|+||+|+.+.++ . .++..
T Consensus 138 ~~~i~~-------------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~---~----~~~~~-- 195 (389)
T 3acz_A 138 KAAWKP-------------NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFL---K----PLELG-- 195 (389)
T ss_dssp HHTCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC---C----GGGTT--
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccc---C----ccccC--
Confidence 887753 4567888999999999999999999999999999999999844321 1 12233
Q ss_pred CccEEEcccccccCCc----ceEEEeCH-HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAGSK-ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~~~-~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
.|+++.|++|+++++ ||++++++ ++++.++..... ++..++|..++++++.|+.+ +.+.++..
T Consensus 196 -~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~--~g~~~~~~~~~~~~~~l~~l---------~~r~~~~~ 263 (389)
T 3acz_A 196 -ADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKD--AGSLMAPMDAFLCARGMKTL---------PIRMQIHM 263 (389)
T ss_dssp -CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHTTH---------HHHHHHHH
T ss_pred -CeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHh--cCCCCCHHHHHHHHcCccHH---------HHHHHHHH
Confidence 399999999999876 48999998 898888754422 34457888888888877643 45667777
Q ss_pred HHHHHHHHHHHhCCC---------------eeeC---CCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEee---------
Q 046230 376 ENSNFFRSELQKMGF---------------EVLG---DNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTV--------- 428 (489)
Q Consensus 376 ~~~~~l~~~L~~~g~---------------~v~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--------- 428 (489)
++...+.+.|++.+. .+.. ...+.++.+.+.. ..++.+.|.+.|+.+...
T Consensus 264 ~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~ 340 (389)
T 3acz_A 264 ENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---FEAAKKLMEHLKVCTLAVSLGCVDTLI 340 (389)
T ss_dssp HHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---HHHHHHHHTTCSSSEEBSCCCCSSCEE
T ss_pred HHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---HHHHHHHHHhCCCcEECcCCCCcccEe
Confidence 788888888877521 1100 1235677777643 455666666779988763
Q ss_pred cCCCcC--------------CCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 429 AFPATP--------------LLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 429 ~~p~~~--------------~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
..|..+ ...+.+|++++...+++.++.+.++|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al 386 (389)
T 3acz_A 341 EHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQAL 386 (389)
T ss_dssp ECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred eCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHH
Confidence 223221 12579999997664444444444433
No 193
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.94 E-value=5.7e-25 Score=229.89 Aligned_cols=328 Identities=14% Similarity=0.068 Sum_probs=230.8
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-------CEEEeCccHHHHHHhHhhhcCC-----
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP-------AAIVFGMGYVTNSAILPVLMRK----- 184 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~i~~~sG~~a~~~~~~al~~~----- 184 (489)
+|.+.+++.+.+.+...... ...+..++..++++.+++++|.+ ..+++++|+++|..++.++..+
T Consensus 69 ~~~v~~~l~~~~~~~~~~~~---~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 69 EPECDKLIMSSINKNYVDMD---EYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCChh---cChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 56777777776655322211 11124556667888899999876 2345788889986666665443
Q ss_pred ---CC-----EEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 185 ---GS-----LIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 185 ---g~-----~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
|+ .|+++.+.|.++...++..|+.++.++.+ |+++|++.+.+ ++.+|++....
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------------~t~~v~~~~~~ 212 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE-------------NTICVAAILGS 212 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT-------------TEEEEEEEBSC
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh-------------CCEEEEEecCC
Confidence 65 89999999999999999999999988754 67888877754 34566666777
Q ss_pred CCCCCCCChHHHHHHHHHc------CcEEEEEcccccccc---cCCCCccccccCCCCCCccEEEcccccccC-Ccc-eE
Q 046230 251 SMEGELCKFPEIIAICKKY------KAYIYLDEAHSIGAV---GKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GY 319 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~------~~~li~DEa~s~g~~---g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~ 319 (489)
+++|.+.|+++|.++|+++ |+++++|++|+.+.. ....+. .+....+|++..+.+|.++ +.| |+
T Consensus 213 n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~-----~~~~~~~D~v~~s~hK~l~~p~g~G~ 287 (502)
T 3hbx_A 213 TLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-----DFRLPLVKSINVSGHKYGLVYAGIGW 287 (502)
T ss_dssp TTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC-----STTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred CCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc-----ccCCCCceEEEECcccccCCCCCeEE
Confidence 8899999999999999999 999999999983321 222221 1112467999999999984 444 76
Q ss_pred EEe-CHHHH-HHHHhhCC-------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-
Q 046230 320 IAG-SKELI-QYLKYTCP-------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG- 389 (489)
Q Consensus 320 i~~-~~~~~-~~l~~~~~-------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 389 (489)
++. +++.+ +.+..... .+.+..+.+.....+..++|..+. .....+++++..++.++|.+.|++++
T Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg----~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (502)
T 3hbx_A 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG----HEGYRNVMENCRENMIVLREGLEKTER 363 (502)
T ss_dssp EEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 655 44443 22211000 001111122233444555555541 11457788899999999999999995
Q ss_pred CeeeCC-CCCCeEEEEeCCC--CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 390 FEVLGD-NDSPVMPIMLYNP--AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 390 ~~v~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
+.+..+ ...+++.+.+... ....++.+.|.++|+.+.....|..+.+..++||++...+|++|++.+++.|+++++.
T Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 364 FNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp EEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 888766 5678888877543 3456899999999999876666666666789999999999999999999999999987
Q ss_pred hCC
Q 046230 467 VGI 469 (489)
Q Consensus 467 ~~~ 469 (489)
+..
T Consensus 444 l~~ 446 (502)
T 3hbx_A 444 LDE 446 (502)
T ss_dssp HHT
T ss_pred HHh
Confidence 753
No 194
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.94 E-value=2e-24 Score=225.75 Aligned_cols=346 Identities=14% Similarity=0.098 Sum_probs=224.9
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHh--CCCCCCcccCCCcchhHHHHHHHHHHHhCCC---CEEEeCccHHHHHH
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKY--SPSTCSSRVDGGTLMVHNELEECVARFVGKP---AAIVFGMGYVTNSA 176 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~--~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ 176 (489)
.+++.|..|+++... +....++.+.+..+ +.+............+..++++.+++++|.+ ..+++++|+++|..
T Consensus 95 ~~~~~~~~yl~~~~~-~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~ 173 (497)
T 2qma_A 95 AIFTQHPDCIAHLHT-PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQM 173 (497)
T ss_dssp SCCTTSTTBCSSSCC-CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHH
T ss_pred CCCCCCCCeeEeCCC-CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHH
Confidence 456777888888876 34445554444332 2211111111122334444566699999863 45556788899866
Q ss_pred hHhhh----c---------CC------CC-EEEEcCCCchHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHHHH
Q 046230 177 ILPVL----M---------RK------GS-LIISDSLNHNSIVNGARGSGA---TIRVFQHN-----TPSHLEEVLREQI 228 (489)
Q Consensus 177 ~~~al----~---------~~------g~-~Vl~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~Le~~l~~~~ 228 (489)
++.++ . .+ ++ .|+++...|.++..+++..|. +++.++.+ |+++|++.|++..
T Consensus 174 al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~ 253 (497)
T 2qma_A 174 GLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAK 253 (497)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHH
Confidence 55552 2 12 45 899999999999999988876 78888876 8999999998743
Q ss_pred hcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcc
Q 046230 229 AEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 229 ~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
.++ .+..+|++....+++|.+.|+++|.++|++||+++++|++|+.+.+... ......++ ..+|+++.+
T Consensus 254 ~~~-------~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~~~~~gi--~~~D~i~~s 322 (497)
T 2qma_A 254 AEG-------LIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS--HKSRLKGV--ERAHSISVD 322 (497)
T ss_dssp HTT-------CEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST--TGGGGTTG--GGCSEEEEE
T ss_pred HCC-------CcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc--chHhhcCc--ccCCEEEEc
Confidence 322 1234566666677899999999999999999999999999994443222 11112344 234899889
Q ss_pred cccccCCcc--eEEEeC-HHHHHHHHhhCCCcccccC---CCHHH----------HHHHHHHHHHHHccCCCchHHHHHH
Q 046230 309 FTKSFGSCG--GYIAGS-KELIQYLKYTCPAHLYATS---ISPPA----------AEQIISAIKVILGEDGSSRGAQKLA 372 (489)
Q Consensus 309 ~sK~~g~~G--G~i~~~-~~~~~~l~~~~~~~~~~~~---~~p~~----------~aa~~a~L~~i~~~~~~~~~~~~~~ 372 (489)
++|+++++. |+++.+ +..++.+... ..+.+... .++.. +.+..++++.+ +....++.++
T Consensus 323 ~hK~l~~p~~~G~l~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l----g~~g~~~~~~ 397 (497)
T 2qma_A 323 FHKLFYQTISCGALLVNDKSNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV----GPKALGDMYD 397 (497)
T ss_dssp TTTTTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHT----CHHHHHHHHH
T ss_pred chhccCCCcceEEEEEeCHHHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh----CHHHHHHHHH
Confidence 999886543 777765 4444433211 11111110 11111 12234455554 2224567889
Q ss_pred HHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC-----cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee-c
Q 046230 373 RIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA-----KIPAFSRECLRQNVAVVTVAFPATPLLLARARICI-S 445 (489)
Q Consensus 373 ~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~-~ 445 (489)
++.++++++.+.|+++ +++++.++..+++++.+.... ...++.+.|.++|+.+.+. +...+.+++||++ +
T Consensus 398 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~---~~~~g~~~lRis~~~ 474 (497)
T 2qma_A 398 HLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGE---TIVDGKTALKFTILN 474 (497)
T ss_dssp HHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEE---EEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEe---eEECCEEEEEEEecC
Confidence 9999999999999997 888866666777777765432 1346778888999988641 1123456899998 8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q 046230 446 ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 446 ~~~t~edid~~l~~l~~~~~~~ 467 (489)
..+|++|+++++++|+++++++
T Consensus 475 ~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 475 PCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999988763
No 195
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.94 E-value=5.7e-25 Score=223.30 Aligned_cols=325 Identities=14% Similarity=0.075 Sum_probs=210.1
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhC--CCCCCcccCCCcchhHHHHHHHHHHHhCC-------CCEEE---eC
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYS--PSTCSSRVDGGTLMVHNELEECVARFVGK-------PAAIV---FG 168 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~---~~ 168 (489)
..|||+.+.|+..... |.+.+++.+++.+.. ....++....|. .++++.+|++++. ++.++ ++
T Consensus 29 ~~i~l~~g~~~d~~~~-~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~ 103 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGK-PYVLNCVRKAEAMIAAKKMDKEYLPIAGL----ADFTRASAELALGENSEAFKSGRYVTVQGI 103 (401)
T ss_dssp TCEECCCCSCCCTTSC-CCCCHHHHHHHHHHHHTTCCCCCCCTTCC----HHHHHHHHHHHHCTTCHHHHTTCEEEEEEE
T ss_pred CceeeeeeeEECCCCC-EechHHHHHHHHHhcccccccCCCCCCCC----HHHHHHHHHHhcCCCccccccCceEEEecC
Confidence 4799987777666544 444455555444321 111122222233 7888888888753 34443 45
Q ss_pred ccHHHHHHhHhhh---cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCC
Q 046230 169 MGYVTNSAILPVL---MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRP 238 (489)
Q Consensus 169 sG~~a~~~~~~al---~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~ 238 (489)
+|++++..++.++ .++||.|+++.|+|..+...++..|++++.++.+ |++++++.+++. +
T Consensus 104 G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~ 173 (401)
T 7aat_A 104 SGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI----------P 173 (401)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS----------C
T ss_pred cchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC----------C
Confidence 5667776555554 4899999999999999999999999999888753 567777777541 1
Q ss_pred CccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC----c-cccccCCCCCCccEEEcccc
Q 046230 239 WKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR----G-VCELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 239 ~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~----~-~~~~~~v~p~~~Di~~~t~s 310 (489)
.++.+|++.+.+|++|.+.+ +++|+++|++||+++|+||+|. .++..+. . .....+. .+..|+++|||
T Consensus 174 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~--~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~s 249 (401)
T 7aat_A 174 EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQ--GFASGDINRDAWALRHFIEQ--GIDVVLSQSYA 249 (401)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT--TTTTSCHHHHTHHHHHHHHT--TCCCEEEEECT
T ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccc--cccCCCccccHHHHHHHHhc--CCcEEEEecCC
Confidence 24567888899999997755 8899999999999999999998 6665442 1 1111122 23368999999
Q ss_pred cccCCcc---eEEEe---CHH----HHHHHHhhCCCcccccCCCHHHHHHHHHHHHH--HHccCCCchHHHHHHHHHHHH
Q 046230 311 KSFGSCG---GYIAG---SKE----LIQYLKYTCPAHLYATSISPPAAEQIISAIKV--ILGEDGSSRGAQKLARIRENS 378 (489)
Q Consensus 311 K~~g~~G---G~i~~---~~~----~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~--i~~~~~~~~~~~~~~~~~~~~ 378 (489)
|.||.+| ||++. +++ +++.+....... ..+.+...++++...++. +.. ....+.++.+++++++.
T Consensus 250 K~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~r 326 (401)
T 7aat_A 250 KNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPM--YSNPPMNGARIASLILNTPELRK-EWLVEVKGMADRIISMR 326 (401)
T ss_dssp TTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHH--HSSCCHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred cccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhc--cCCCChHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999889 99775 666 334443322211 112333433333333321 000 00014567788999999
Q ss_pred HHHHHHHHhCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHH-hhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHH
Q 046230 379 NFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSREC-LRQNVAVVTVAFPATPLLLARARICISASHTKEDL 453 (489)
Q Consensus 379 ~~l~~~L~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edi 453 (489)
+++.+.|++++ +.+..+.++.++++. ..... ...+ .++||.+. +.+||+++. +|.++|
T Consensus 327 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~ll~~~gi~v~-----------~~~Ris~~~-~~~~~i 389 (401)
T 7aat_A 327 TQLVSNLKKEGSSHNWQHITDQIGMFCFTG----LKPEQ-VERLTKEFSIYMT-----------KDGRISVAG-VASSNV 389 (401)
T ss_dssp HHHHHHHHHTTCCSCCHHHHHCCSSEEECC----CCHHH-HHHHHHHHCEECC-----------TTCEEEGGG-CCTTTH
T ss_pred HHHHHHHHhcCCCCCCceecCCcceEEecC----CCHHH-HHHHHHhCCEecc-----------CCCeEEecc-CChhhH
Confidence 99999999986 444445555544332 22333 4555 55699886 127999974 566669
Q ss_pred HHHHHHHHHHH
Q 046230 454 IKALEVISRVG 464 (489)
Q Consensus 454 d~~l~~l~~~~ 464 (489)
++++++|++++
T Consensus 390 ~~~~~~l~~~~ 400 (401)
T 7aat_A 390 GYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 196
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.93 E-value=2.9e-25 Score=221.93 Aligned_cols=293 Identities=15% Similarity=0.124 Sum_probs=204.6
Q ss_pred CcchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCE--EEEcCCCchHHHH--H-HHhcCCeEEEecCC--
Q 046230 143 GTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSL--IISDSLNHNSIVN--G-ARGSGATIRVFQHN-- 215 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~--Vl~~~~~h~~~~~--~-~~~~g~~~~~~~~~-- 215 (489)
+..+...+++++++++++.+..+++++|++++..++.++..+++. |+++.++|..... . ....|++++.++.+
T Consensus 45 ~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 45 GNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQ 124 (359)
T ss_dssp TBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCTTS
T ss_pred cCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCcCC
Confidence 456778999999999999998888899999998888888776664 7777777765532 2 24569999888765
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcccccccccCCCC
Q 046230 216 --TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME-GELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289 (489)
Q Consensus 216 --d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~-G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~ 289 (489)
|+++|+++ . .++.+|+++++++++ |.+.+ +++|+++|++||++||+||+|..+.....|.
T Consensus 125 ~~d~~~l~~~--~------------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~ 190 (359)
T 3pj0_A 125 LLTIDDIKSL--R------------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQK 190 (359)
T ss_dssp CCCHHHHHTC--S------------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTC
T ss_pred CcCHHHHHhc--c------------CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCC
Confidence 67777765 1 234466677776665 78777 4555999999999999999987443322222
Q ss_pred ccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHH
Q 046230 290 GVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGA 368 (489)
Q Consensus 290 ~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (489)
...+.. ...|+++.|+||++++++ |++++++++++.++.....+..+.......++++..+++.. .
T Consensus 191 ~~~~~~----~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~ 257 (359)
T 3pj0_A 191 SAEEIC----ALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKR---------I 257 (359)
T ss_dssp CHHHHH----TTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHH---------G
T ss_pred CHHHhh----ccCCEEEEeccccCCCcceEEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHH---------H
Confidence 211111 233788889999997654 78889999999886532111111123333444455566543 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCeee-CCCCCCeEEEEeCCCC--cHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee
Q 046230 369 QKLARIRENSNFFRSELQKM-GFEVL-GDNDSPVMPIMLYNPA--KIPAFSRECLRQNVAVVTVAFPATPLLLARARICI 444 (489)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~~~-g~~v~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~ 444 (489)
+.+++..++.+++.+.|+++ |+.+. .+..++++++.+..+. ...++.+.|.++||.+.+...+.. .+..++|+++
T Consensus 258 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~-~~~~~~r~~i 336 (359)
T 3pj0_A 258 GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS-ADVCAFEVSV 336 (359)
T ss_dssp GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE-TTEEEEEEEC
T ss_pred HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC-CCceEEEEEe
Confidence 44556788889999999998 88875 4566777787776542 356788999999999997433322 3457899987
Q ss_pred cCC---CCHHHHHHHHHHHHHH
Q 046230 445 SAS---HTKEDLIKALEVISRV 463 (489)
Q Consensus 445 ~~~---~t~edid~~l~~l~~~ 463 (489)
... .+.+++++++++|.++
T Consensus 337 ~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 337 GDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp CTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHHHHhc
Confidence 543 6789999999888764
No 197
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.6e-24 Score=219.27 Aligned_cols=283 Identities=17% Similarity=0.120 Sum_probs=211.9
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHh----cCCeEEEecCCCHHH
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSH 219 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~ 219 (489)
..+...+|+++++++.|.++++++++|++++..++.++.++||.|++..+.|+++...+.. .|.+++.++.+|+++
T Consensus 79 ~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 158 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQ 158 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHH
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHH
Confidence 3567889999999999999999999999999888999999999999999999998776644 899999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
|+++++. ++.+|+++++++++|.+.++++|+++|+++|++||+||+|+.+.+.. ...
T Consensus 159 l~~ai~~-------------~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-------~~~--- 215 (414)
T 3ndn_A 159 WERALSV-------------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ-------GFP--- 215 (414)
T ss_dssp HHHHTSS-------------CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-------CGG---
T ss_pred HHHhcCC-------------CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC-------chh---
Confidence 9988753 34467779999999999999999999999999999999998543221 111
Q ss_pred CCccEEEcccccccCCcc----eEEEeCHHHHH-HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGSKELIQ-YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~-~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
.++|+++.|+||++|+.| |+++++++.+. .++.... .++..++|..++.++..++.+ ..++++.
T Consensus 216 ~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~--~~g~~~~~~~a~~~~~~l~~l---------~~r~~~~ 284 (414)
T 3ndn_A 216 LGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR--HTGPAMSAFNAWVLLKGLETL---------AIRVQHS 284 (414)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHH--HHCCCCCHHHHHHHHHHGGGH---------HHHHHHH
T ss_pred cCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHH--HcCCCCCHHHHHHHHHHHHHH---------HHHHHHH
Confidence 223899999999998755 99999988765 5543222 234457888877777766643 6677888
Q ss_pred HHHHHHHHHHHHhC-CCe-eeCC----------------CCCCeEEEEeCC-----CCcHHHHHHHHhhCCceEEeecC-
Q 046230 375 RENSNFFRSELQKM-GFE-VLGD----------------NDSPVMPIMLYN-----PAKIPAFSRECLRQNVAVVTVAF- 430 (489)
Q Consensus 375 ~~~~~~l~~~L~~~-g~~-v~~~----------------~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gi~v~~~~~- 430 (489)
.++.+.+.+.|++. ++. +.-+ ..+.++++.+.. .....+|.+.|...++.+...+.
T Consensus 285 ~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~ 364 (414)
T 3ndn_A 285 NASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAK 364 (414)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSS
T ss_pred HHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCC
Confidence 89999999999876 322 2111 136788888854 23466788887766665543221
Q ss_pred -----CC--------------cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 431 -----PA--------------TPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 431 -----p~--------------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
|+ .....+.+||++.. |+.+.+++.|++++
T Consensus 365 sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al 413 (414)
T 3ndn_A 365 SLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL 413 (414)
T ss_dssp CEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred ceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 11 12346789999964 55666666666654
No 198
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.93 E-value=2.5e-24 Score=218.91 Aligned_cols=283 Identities=14% Similarity=0.129 Sum_probs=207.1
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
++...++++++|++++.++++++++|++++..++. +.++|+.|++..+.|+++...+ +..|++++.++.+|+++|
T Consensus 66 ~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 144 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLL 144 (403)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHH
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 35568999999999999899999999988877777 8899999999999999865543 467999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC-cEEEEEcccccccccCCCCccccccCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK-AYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~-~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
++.++. ++.+|++++++|++|.+.++++|.++|+++| +++|+||+|+.+.+.. .++.
T Consensus 145 ~~~i~~-------------~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-------~~~~-- 202 (403)
T 3cog_A 145 EAAITP-------------ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-------PLAL-- 202 (403)
T ss_dssp HHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-------TTTT--
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-------cccc--
Confidence 887753 4567778999999999999999999999999 9999999999443221 1222
Q ss_pred CCccEEEcccccccCCcc----eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
+.||++.|++|+|+++| |+++++ +++++.++..... ++...+|..++++..+|+.+ +.+.++.
T Consensus 203 -~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~--~g~~~~~~~~~~~~~~l~~l---------~~r~~~~ 270 (403)
T 3cog_A 203 -GADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNS--LGAVPSPIDCYLCNRGLKTL---------HVRMEKH 270 (403)
T ss_dssp -TCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHTTH---------HHHHHHH
T ss_pred -CCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhhHH---------HHHHHHH
Confidence 34999999999998654 899884 7888887654432 34457888888888777643 4456666
Q ss_pred HHHHHHHHHHHHhC---------------CCeeeCC---CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEee--c-----
Q 046230 375 RENSNFFRSELQKM---------------GFEVLGD---NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTV--A----- 429 (489)
Q Consensus 375 ~~~~~~l~~~L~~~---------------g~~v~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--~----- 429 (489)
.++...+.+.|++. ++.+..+ ..+.++.+.+... ..++.+.|.+.||.+... +
T Consensus 271 ~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~--~~~~~~~l~~~~i~~~~~s~G~~~sl 348 (403)
T 3cog_A 271 FKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGT--LQHAEIFLKNLKLFTLAESLGGFESL 348 (403)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCSSSSCE
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCC--HHHHHHHHHhCCcceEccCCCCccee
Confidence 66666666666554 2222111 2366666665432 244556666778876542 1
Q ss_pred --CCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 430 --FPAT--------------PLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 430 --~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.|.. ....+.+||++....++++|+.+.++|++++
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 349 AELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp EECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred eecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 2211 1225799999998788787777777776543
No 199
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.4e-23 Score=216.60 Aligned_cols=306 Identities=14% Similarity=0.116 Sum_probs=207.9
Q ss_pred cchhHHHHHHHHHHHhCCC------------CEEEeCccHHHHHHhHhhhcC-------------------CCCEEEEcC
Q 046230 144 TLMVHNELEECVARFVGKP------------AAIVFGMGYVTNSAILPVLMR-------------------KGSLIISDS 192 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~------------~~i~~~sG~~a~~~~~~al~~-------------------~g~~Vl~~~ 192 (489)
..++..++.+.+++.+|.+ ..+++++||++|..++.+... ++++|+++.
T Consensus 116 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~ 195 (481)
T 4e1o_A 116 CTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASD 195 (481)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcC
Confidence 3444445555556667765 346778899999555554421 567999999
Q ss_pred CCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHH
Q 046230 193 LNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICK 267 (489)
Q Consensus 193 ~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~ 267 (489)
..|.++..++++.|++++.++.+ |+++|+++|++...+| ....+|++....+++|.+.|+++|.++|+
T Consensus 196 ~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g-------~~~~~vv~~~~~t~~G~id~l~~I~~la~ 268 (481)
T 4e1o_A 196 QAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRG-------LVPVFVCATLGTTGVCAFDCLSELGPICA 268 (481)
T ss_dssp TSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTT-------CEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred cchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCC-------CCcEEEEEecCCCCCcCcCCHHHHHHHHH
Confidence 99999999999999999999875 8999999998754432 22445555566778999999999999999
Q ss_pred HcCcEEEEEcccccccc-cCCCCccccccCCCCCCccEEEcccccccCCc-c-eEEEe-CHHHHHHHHhhCCCccccc--
Q 046230 268 KYKAYIYLDEAHSIGAV-GKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAG-SKELIQYLKYTCPAHLYAT-- 341 (489)
Q Consensus 268 ~~~~~li~DEa~s~g~~-g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~-~~~~~~~l~~~~~~~~~~~-- 341 (489)
+||+++++|++|+.+.+ ....+.. ..|+ ..+|.++.+.+|+++.+ | |+++. +++.+.........+....
T Consensus 269 ~~~~~lhvDaA~g~~~~~~~~~~~~--~~gi--~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~ 344 (481)
T 4e1o_A 269 REGLWLHIDAAYAGTAFLCPEFRGF--LKGI--EYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANS 344 (481)
T ss_dssp HHTCEEEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTT
T ss_pred HcCCeEEeehhhHHHHHhChhhHHH--hcCc--ccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCccc
Confidence 99999999999985433 2222211 1233 23489988999999754 3 55544 4554332111111111110
Q ss_pred ------------CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCC
Q 046230 342 ------------SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP 408 (489)
Q Consensus 342 ------------~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~ 408 (489)
...+..+....++|+.+- ....++.+++..++++++++.|+++ |+++..+...+++++.+...
T Consensus 345 ~~~~~~~~~~~~~~r~~~~l~~~~al~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~ 420 (481)
T 4e1o_A 345 GVATDFMHWQIPLSRRFRSVKLWFVIRSFG----VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGP 420 (481)
T ss_dssp TTSCCGGGGSSSSCCCCTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSC
T ss_pred CCCCCcccccccCCCCccHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCc
Confidence 010112233444444431 1156788899999999999999998 89987777788888877432
Q ss_pred -CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCC-CCHHHHHHHHHHHHHHHHHh
Q 046230 409 -AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISAS-HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 -~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~ 467 (489)
....++.++|.++|+.+.. |+...+..++|+++... .|++||++++++|+++++++
T Consensus 421 ~~~~~~l~~~L~~~g~~~~~---~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 421 NSLTENVLKEIAKAGRLFLI---PATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp HHHHHHHHHHHHHHCSSBCE---EEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCeEEEE---eeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3456889999999854322 22234567899997644 48999999999999988764
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=1.4e-24 Score=219.98 Aligned_cols=283 Identities=17% Similarity=0.151 Sum_probs=209.2
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|++++.++.+++++|++++..++. +.++||.|+++.+.|++.... ++..|++++.++.+| ++|
T Consensus 54 ~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l 131 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDL 131 (393)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHH
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHH
Confidence 45678999999999999899999999999988888 888999999999999876553 345688899998877 888
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHc----CcEEEEEcccccccccCCCCccccccC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKY----KAYIYLDEAHSIGAVGKTGRGVCELLE 296 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~----~~~li~DEa~s~g~~g~~G~~~~~~~~ 296 (489)
+++++. ++.+|+++++++++|.+.|+++|.++|++| |+++|+||+|+.+.+. . ...
T Consensus 132 ~~~i~~-------------~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~---~----~~~ 191 (393)
T 1n8p_A 132 PQLIKE-------------NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS---N----PLN 191 (393)
T ss_dssp HHHSCS-------------SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC---C----GGG
T ss_pred HHhccc-------------CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC---C----HHH
Confidence 776642 456788899999999999999999999999 9999999999955432 1 112
Q ss_pred CCCCCccEEEcccccccCCcc----eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG----GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL 371 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G----G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~ 371 (489)
. ++|+++.|++|.+|++| |+++++ +++++.+...... ++..+++..++++..+++.+ ..+.
T Consensus 192 ~---~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~--~g~~~~~~~~~~~~~~l~~~---------~~~~ 257 (393)
T 1n8p_A 192 F---GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA--IGAIPSPFDAWLTHRGLKTL---------HLRV 257 (393)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHTTH---------HHHH
T ss_pred c---CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhccchH---------HHHH
Confidence 2 24999999999999766 999984 8888887654322 34457787777777776643 5667
Q ss_pred HHHHHHHHHHHHHHHhCCC--e-e-eC---------------CC-C-CCeEEEEeCCC-CcHHHHHHHHhhCCceEEee-
Q 046230 372 ARIRENSNFFRSELQKMGF--E-V-LG---------------DN-D-SPVMPIMLYNP-AKIPAFSRECLRQNVAVVTV- 428 (489)
Q Consensus 372 ~~~~~~~~~l~~~L~~~g~--~-v-~~---------------~~-~-~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~- 428 (489)
++..++.+.+.+.|++.+. . + .+ .. . +.++++.+... .....+...|...++.+...
T Consensus 258 ~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~ 337 (393)
T 1n8p_A 258 RQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGG 337 (393)
T ss_dssp HHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCC
Confidence 7778888888888877632 1 1 11 01 3 66888887542 24455666654444443211
Q ss_pred -----cCCCcC--------------CCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 429 -----AFPATP--------------LLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 429 -----~~p~~~--------------~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
..|..+ ...+.+||+++...++++++.+.++|+++
T Consensus 338 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 338 IESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp SSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 112111 12579999999999999999999998865
No 201
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.93 E-value=3.1e-24 Score=218.63 Aligned_cols=284 Identities=14% Similarity=0.175 Sum_probs=211.6
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++++|++.|.++++++++|++++..++.++.++||.|+++.+.|+++...+ ...|+++..++.+|+++|
T Consensus 81 ~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~l 160 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADI 160 (415)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGG
T ss_pred CchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 5677899999999999998999999999998889988999999999999999877554 346899999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHH--cCcEEEEEcccccccccCCCCccccccCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKK--YKAYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
+++|+. ++.+|++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+... .. ...
T Consensus 161 e~ai~~-------------~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~---~p----~~~- 219 (415)
T 2fq6_A 161 VKHLQP-------------NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF---KA----LDF- 219 (415)
T ss_dssp GGGCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS---CG----GGG-
T ss_pred HHhhcc-------------CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC---Cc----ccc-
Confidence 987754 45678889999999999999999999999 99999999999844221 11 122
Q ss_pred CCCccEEEcccccccCCcc----eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHH
Q 046230 299 TADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G----G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (489)
++|+++.|++|.+|+.| |++++++++++.++.... .++..++|..++.++..++.+ ..+.++.
T Consensus 220 --g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~--~~G~~~~~~~a~~~~~~l~~l---------~~r~~~~ 286 (415)
T 2fq6_A 220 --GIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAY--LMGQMVDADTAYITSRGLRTL---------GVRLRQH 286 (415)
T ss_dssp --TCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred --CCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhhHH---------HHHHHHH
Confidence 34999999999998764 899999888887765432 134457787777777777754 5677778
Q ss_pred HHHHHHHHHHHHhCC-Ce-e-eC---------------CCCCCeEEEEeCCC---CcHHHHHHHHhhCCceEEeec----
Q 046230 375 RENSNFFRSELQKMG-FE-V-LG---------------DNDSPVMPIMLYNP---AKIPAFSRECLRQNVAVVTVA---- 429 (489)
Q Consensus 375 ~~~~~~l~~~L~~~g-~~-v-~~---------------~~~~~~~~~~~~~~---~~~~~~~~~l~~~Gi~v~~~~---- 429 (489)
.++...+.+.|++.. +. + ++ ...+.++++.+... .....|.+.|...++.+...+
T Consensus 287 ~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~ 366 (415)
T 2fq6_A 287 HESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESL 366 (415)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCE
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCcee
Confidence 888889999988762 21 1 11 12467888888652 234455544432233332110
Q ss_pred --C--C----------CcCCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 046230 430 --F--P----------ATPLLLARARICISASHTKEDLIKALEVISR 462 (489)
Q Consensus 430 --~--p----------~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (489)
. | ......+.+||++....++++++.+.++|++
T Consensus 367 ~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 367 ILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp EEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred EEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 0 1 0112347999999999999999988888864
No 202
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.93 E-value=3.3e-24 Score=219.92 Aligned_cols=335 Identities=13% Similarity=0.147 Sum_probs=220.4
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHh-CCCCCCcccCCCcchhHHHHHHHHHHHhCCC-CEEEeC-ccHHHHH
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKY-SPSTCSSRVDGGTLMVHNELEECVARFVGKP-AAIVFG-MGYVTNS 175 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~-sG~~a~~ 175 (489)
+..++|++++. +.+|.+.+++.+++.+. +..........+..+...++++.+|+++|.+ +.++++ +|++++.
T Consensus 18 ~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~ 92 (432)
T 3a9z_A 18 RKVYMDYNATT-----PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNN 92 (432)
T ss_dssp CCEECBTTTCC-----CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred CcEEeeCCccC-----CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHH
Confidence 56677765432 34689999999998762 1111111111122345689999999999974 455555 4577777
Q ss_pred HhHhhhc--------CCCC-------------EEEEcCCCchHHHHHH----HhcCCeEEEecCC------CHHHHHHHH
Q 046230 176 AILPVLM--------RKGS-------------LIISDSLNHNSIVNGA----RGSGATIRVFQHN------TPSHLEEVL 224 (489)
Q Consensus 176 ~~~~al~--------~~g~-------------~Vl~~~~~h~~~~~~~----~~~g~~~~~~~~~------d~~~Le~~l 224 (489)
.++.++. ++|+ .|+++...|.+....+ +..|++++.++.+ |+++|++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i 172 (432)
T 3a9z_A 93 LVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAV 172 (432)
T ss_dssp HHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTC
T ss_pred HHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhc
Confidence 7777764 4674 5666666677765544 3358898888763 677777666
Q ss_pred HHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC----------cEEEEEcccccccccCCCCccccc
Q 046230 225 REQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK----------AYIYLDEAHSIGAVGKTGRGVCEL 294 (489)
Q Consensus 225 ~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~----------~~li~DEa~s~g~~g~~G~~~~~~ 294 (489)
.. ++.+|+++++++++|.+.++++|.++|+++| +++|+||+|+.|. .. .+.
T Consensus 173 ~~-------------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~---~~---~~~ 233 (432)
T 3a9z_A 173 RP-------------TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK---RR---VDV 233 (432)
T ss_dssp CT-------------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT---SC---CCH
T ss_pred cC-------------CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCC---cc---cCh
Confidence 42 3557788999999999999999999999999 9999999998432 11 111
Q ss_pred cCCCCCCccEEEcccccccCCcceEEEeCHHH-HHHHHhhCCC-----cccccCCCHHHHHHHHHHHHHHHccCCCchHH
Q 046230 295 LEVDTADVDIMMGTFTKSFGSCGGYIAGSKEL-IQYLKYTCPA-----HLYATSISPPAAEQIISAIKVILGEDGSSRGA 368 (489)
Q Consensus 295 ~~v~p~~~Di~~~t~sK~~g~~GG~i~~~~~~-~~~l~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (489)
....+ |+++.|++|++|+..||+++++++ .+.+.....+ .....+.++..++++.++|+.+.. ..+
T Consensus 234 ~~~~~---d~~~~s~~K~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~-----~~~ 305 (432)
T 3a9z_A 234 EDLGV---DFLTIVGHKFYGPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSE-----NCE 305 (432)
T ss_dssp HHHCC---SEEEEEGGGTTCCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHH-----HHH
T ss_pred hhcCC---CEEEEehhHhcCCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHh-----hHH
Confidence 11223 899999999998645999998765 2222211100 001124678888888888887631 457
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCeee--CC-----CCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeec--CC------
Q 046230 369 QKLARIRENSNFFRSELQKM-GFEVL--GD-----NDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVA--FP------ 431 (489)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~~~-g~~v~--~~-----~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~--~p------ 431 (489)
+.+++++++.+++.+.|+++ |+.+. ++ ..+.++.+.+.. .....++.+.+. |+.+.... .+
T Consensus 306 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~G~~~~~~~~~~~ 383 (432)
T 3a9z_A 306 TYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQ--TLLASVGASCHSDHEDRP 383 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCS--SEECBSSCGGGGGGTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhc--CeEEeccccccCCCCCCc
Confidence 78899999999999999985 65442 22 123356666654 234555665542 44443210 00
Q ss_pred -------CcC--CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 432 -------ATP--LLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 432 -------~~~--~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
..+ ...+++||+++..+|++|+++++++|+++++++
T Consensus 384 ~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~ 428 (432)
T 3a9z_A 384 SPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL 428 (432)
T ss_dssp CHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 000 123789999988889999999999999998765
No 203
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=1.9e-24 Score=219.24 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=190.5
Q ss_pred hHHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcC-CCchHHHHH----------HHhcCCeEEEe
Q 046230 147 VHNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDS-LNHNSIVNG----------ARGSGATIRVF 212 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~-~~h~~~~~~----------~~~~g~~~~~~ 212 (489)
.+.+|++.+|+++|.+.+++ ++||++|+..++.++.++||.|+++. +.|..+... ++..|++++.+
T Consensus 60 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v 139 (409)
T 3jzl_A 60 GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV 139 (409)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe
Confidence 36889999999999999888 78999999989999999999999998 888887643 35568899988
Q ss_pred cC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC----cCCCCCCCCChHHHHHHHHH--cCcEEEEEccccc
Q 046230 213 QH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG----IYSMEGELCKFPEIIAICKK--YKAYIYLDEAHSI 281 (489)
Q Consensus 213 ~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~----v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~ 281 (489)
+. .|++++++++++ ++.+|++++ +++++|.+.++++|+++|++ +|+++++||+|+.
T Consensus 140 ~~~~~g~~d~e~l~~ai~~-------------~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 140 PLLENGDVDFPRIAKKMTP-------------KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp CCCTTSCCCHHHHHHHCCT-------------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred CCCCCCCcCHHHHHHhccC-------------CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 87 488888887753 456777888 99999999999999999999 9999999999984
Q ss_pred ccccCCCCccccccCCCCCCccEEEcccccccCCc----ceEEEeCHHHHHHHHhhC--CCcccccCCCHHHHHHHHHHH
Q 046230 282 GAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKYTC--PAHLYATSISPPAAEQIISAI 355 (489)
Q Consensus 282 g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~----GG~i~~~~~~~~~l~~~~--~~~~~~~~~~p~~~aa~~a~L 355 (489)
+.++. . ... .++||+++|++|.+|+. |||+++++++++.++... .......+..+..+.+++..|
T Consensus 207 ~~~~~--~----p~~---~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl 277 (409)
T 3jzl_A 207 FVEYQ--E----PPE---VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF 277 (409)
T ss_dssp TTSSC--C----SGG---GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH
T ss_pred ccccC--C----ccc---cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHH
Confidence 43211 1 111 23499999999999753 599999999999987632 222222222222234455555
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCC-----eEEEEeCCCCcHHHHHHHHhhCC
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP-----VMPIMLYNPAKIPAFSRECLRQN 422 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~G 422 (489)
+. .+.+++++.+++.++.+.|+++|+.+.+. .++ ++++.+.+.....+|++.|.+..
T Consensus 278 ~~---------~~~r~~~~~~~a~~la~~L~~~g~~v~p~-~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 278 FL---------APHVTAQAIKGARFTAAMLAEFGVEADPV-WDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS 339 (409)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred hh---------HHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 53 36788899999999999999999988654 444 88999987777889999999874
No 204
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.92 E-value=2.9e-23 Score=215.41 Aligned_cols=344 Identities=13% Similarity=0.058 Sum_probs=222.4
Q ss_pred cccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHHHHHHHHhCCC-----------CEEEeCccHH
Q 046230 105 LGSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELEECVARFVGKP-----------AAIVFGMGYV 172 (489)
Q Consensus 105 ~~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~ 172 (489)
..+..|+|+-..++.....+.+.+.. ++.+........+...+..++.+.+++++|.+ ..+++++||+
T Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~ 150 (475)
T 3k40_A 71 WHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASE 150 (475)
T ss_dssp TTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHH
T ss_pred CCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHH
Confidence 34566777665544444444444443 33222111111223344444445567777776 3577788999
Q ss_pred HHHHhHhhhc-------------------CCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC----CHHHHHHHHHHHHh
Q 046230 173 TNSAILPVLM-------------------RKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIA 229 (489)
Q Consensus 173 a~~~~~~al~-------------------~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~Le~~l~~~~~ 229 (489)
+|..++.+.. .++++|+++...|.++..+++..|++++.++.+ |+++|+++|++...
T Consensus 151 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~ 230 (475)
T 3k40_A 151 STLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVA 230 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHH
Confidence 9955554432 134689999999999999999999999999885 89999999987544
Q ss_pred cCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccc-cCCCCccccccCCCCCCccEEEcc
Q 046230 230 EGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV-GKTGRGVCELLEVDTADVDIMMGT 308 (489)
Q Consensus 230 ~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~-g~~G~~~~~~~~v~p~~~Di~~~t 308 (489)
++ ....+|++....+++|.+.|+++|.++|++||+++++|++|+.+.+ ....+.. ..++ ..+|.+..+
T Consensus 231 ~~-------~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~--~~gi--~~~Ds~~~~ 299 (475)
T 3k40_A 231 EG-------LIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHL--MKGI--ESADSFNFN 299 (475)
T ss_dssp TT-------CEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEEC
T ss_pred CC-------CccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHH--hcCc--ccCCEEEEC
Confidence 32 1234455555567789999999999999999999999999985433 1111111 1233 234899899
Q ss_pred cccccCCc-c-eEEEeC-HHHH-HHHHhhCCCccc-------------cc-CCCHHHHHHHHHHHHHHHccCCCchHHHH
Q 046230 309 FTKSFGSC-G-GYIAGS-KELI-QYLKYTCPAHLY-------------AT-SISPPAAEQIISAIKVILGEDGSSRGAQK 370 (489)
Q Consensus 309 ~sK~~g~~-G-G~i~~~-~~~~-~~l~~~~~~~~~-------------~~-~~~p~~~aa~~a~L~~i~~~~~~~~~~~~ 370 (489)
++|+++.+ | |+++.+ ++.+ +.+... ..+.. +. ..-+..+....++|+.+. ....+++
T Consensus 300 ~hK~l~~p~g~g~l~~~~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g----~~g~~~~ 374 (475)
T 3k40_A 300 PHKWMLVNFDCSAMWLKDPSWVVNAFNVD-PLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG----VENLQAH 374 (475)
T ss_dssp HHHHSSCCSSCEEEEESSGGGC----------------------------CCCGGGTHHHHHHHHHHHH----HHHHHHH
T ss_pred chhccCCCCceEEEEEeCHHHHHHHhcCC-ccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh----HHHHHHH
Confidence 99988643 4 555554 4432 222111 11100 00 011122334455555441 1246788
Q ss_pred HHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCC-
Q 046230 371 LARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISAS- 447 (489)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~- 447 (489)
+++..++.+++++.|+++ |+++..+...+++++.+.. .....++.++|.++|..... |+.+.+..++|+++...
T Consensus 375 ~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~g~~~lR~~~~~~~ 451 (475)
T 3k40_A 375 IRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLV---PAKIKDVYFLRMAICSRF 451 (475)
T ss_dssp HHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCE---EEEETTEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEE---eeEECCEEEEEEEeCCCC
Confidence 899999999999999998 8998877778888887743 23456899999998765432 22334568999997644
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q 046230 448 HTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 448 ~t~edid~~l~~l~~~~~~~ 467 (489)
.|++||++++++|+++++++
T Consensus 452 tt~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 452 TQSEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999998765
No 205
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.92 E-value=2.3e-24 Score=215.85 Aligned_cols=310 Identities=13% Similarity=0.105 Sum_probs=212.2
Q ss_pred CCccchHHHHHHHHHhCCCCCCc-----ccCCCcchhHHHHHHHHHHHhCCCC--E-EEe-CccHHHHHHhHhhhcCCCC
Q 046230 116 SDEYCTPRVIESLKKYSPSTCSS-----RVDGGTLMVHNELEECVARFVGKPA--A-IVF-GMGYVTNSAILPVLMRKGS 186 (489)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~-----~~~~g~~~~~~~l~~~la~~~g~~~--~-i~~-~sG~~a~~~~~~al~~~g~ 186 (489)
.++.+.+++.+.+.++.. .+++ ....+..++.+++++.+++++|.+. . +++ ++|++++..++.++.++||
T Consensus 15 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd 93 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQH-TGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQ 93 (362)
T ss_dssp CCHHHHHHHHHTSSSSTT-SSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTC
T ss_pred CCHHHHHHHHHHHhhhhh-cCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCC
Confidence 468888888888765421 1111 0111234467889999999999863 4 566 5667777888889999999
Q ss_pred EEEEcCCCchHH--HHHHHhcCCeEEEecCC---------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCC
Q 046230 187 LIISDSLNHNSI--VNGARGSGATIRVFQHN---------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255 (489)
Q Consensus 187 ~Vl~~~~~h~~~--~~~~~~~g~~~~~~~~~---------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~ 255 (489)
.|++..+.|.+. ...++..| +++.++.+ |.++++ +. .++.+|++.++.+++|.
T Consensus 94 ~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-------------~~t~~v~~~~~~n~tG~ 157 (362)
T 2c0r_A 94 TANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-------------DNAAYLHLTSNETIEGA 157 (362)
T ss_dssp EEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-------------TTEEEEEEESEETTTTE
T ss_pred eEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-------------CCcCEEEEeCCcCccce
Confidence 887665554442 34556668 77776532 222221 21 13445555566788998
Q ss_pred C-CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhh
Q 046230 256 L-CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYT 333 (489)
Q Consensus 256 ~-~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~ 333 (489)
. .++++| +|+++|+||+|++|.. ..++ .+.|+++.|++|++|++| ||+++++++++.+...
T Consensus 158 ~~~~l~~i------~~~~vivD~a~~~~~~---------~~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~ 220 (362)
T 2c0r_A 158 QFKAFPDT------GSVPLIGDMSSDILSR---------PFDL--NQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKH 220 (362)
T ss_dssp ECSSCCCC------TTSCEEEECTTTTTSS---------CCCG--GGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTT
T ss_pred eccccccc------CCCEEEEEChhhccCC---------ccch--hHCcEEEEeccccccCcCcEEEEEcHHHHhhcccc
Confidence 4 778887 8999999999995532 1122 223899999999999888 9999998887665431
Q ss_pred CCCc----------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-C-eeeCC---CCC
Q 046230 334 CPAH----------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-F-EVLGD---NDS 398 (489)
Q Consensus 334 ~~~~----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~v~~~---~~~ 398 (489)
...+ ....+.++..++++.++|+.+.. .+..++.+++++++.+++.+.|+++| + .+..+ ...
T Consensus 221 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 297 (362)
T 2c0r_A 221 LPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEE---RGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSD 297 (362)
T ss_dssp SCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCS
T ss_pred CchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCC
Confidence 1100 11224777888888999987631 01257788999999999999999997 6 76432 234
Q ss_pred CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 399 PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
.++++.+.......++++.|.++||.+.+ +++. .+.+|+++...+|++|+++++++|++++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~L~~~gi~~~~-g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 298 MNITFRLASEELEKEFVKASEQEGFVGLK-GHRS----VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTEESCB-CCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCcchHHHHHHHHHHCCCeecc-CCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 56666554333567899999999997653 2222 2569999988889999999999999987653
No 206
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=2.6e-24 Score=216.66 Aligned_cols=287 Identities=16% Similarity=0.169 Sum_probs=194.5
Q ss_pred chhHHHHHHHHHHHhCC---CCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchH---HHHHHHhcCCeEEEecCCCHH
Q 046230 145 LMVHNELEECVARFVGK---PAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNS---IVNGARGSGATIRVFQHNTPS 218 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~---~~~~~~~~g~~~~~~~~~d~~ 218 (489)
...+.++++.+++++|. ++.+++++|++++..++.++ +||.|+++.+.|++ ....++..|++++.+ .|++
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--~d~~ 132 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES--DKVG 132 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--SCHH
T ss_pred hHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe--CCHH
Confidence 34456788888888898 56777789999998888877 89999999995543 344677789998888 6888
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccEE-EEEcCcCCCCC-CCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccC
Q 046230 219 HLEEVLREQIAEGQPRTHRPWKKIM-VIVEGIYSMEG-ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLE 296 (489)
Q Consensus 219 ~Le~~l~~~~~~g~~~~~~~~~~~~-vive~v~s~~G-~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~ 296 (489)
+|++. . .++.+ |+++++++++| ...++++|.++|++||++||+||+|+.+..++..... ...
T Consensus 133 ~l~~~--~------------~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~ 196 (374)
T 2aeu_A 133 EILNK--I------------DKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPP--ALK 196 (374)
T ss_dssp HHHTT--C------------CTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCC--HHH
T ss_pred HHHhc--C------------CCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCC--ccc
Confidence 88765 2 13445 77889999999 8889999999999999999999999843211111100 111
Q ss_pred CCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
..+ |++++|+||++++.+ ||+++++++++.++..... ++.+.+++.++++.++|+.+ . .+.++++.
T Consensus 197 ~~~---di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~a~~~al~~~-------~-~~~~~~~~ 263 (374)
T 2aeu_A 197 LGA---DLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTK--FGLEAQPPLLAGIYRALKNF-------N-LERIRKAF 263 (374)
T ss_dssp HTC---SEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHT--TTCBCCHHHHHHHHHHHHHC-------C-HHHHHHHH
T ss_pred cCC---cEEEecCcccccCcceEEEEECHHHHHHHHHhhcc--ccCCCCHHHHHHHHHHHHHH-------h-HHHHHHHH
Confidence 223 899999999996544 9999999999988765432 33458899999999998864 1 12333343
Q ss_pred HHH--------HHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcH------HHHHHHHh-hCCceEEeecCCCcCCC
Q 046230 376 ENS--------NFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKI------PAFSRECL-RQNVAVVTVAFPATPLL 436 (489)
Q Consensus 376 ~~~--------~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~------~~~~~~l~-~~Gi~v~~~~~p~~~~~ 436 (489)
++. +.+.+.|..+ |+.+...+.+.+++.. .. ... .+++..++ ++||.+.+... .|.+
T Consensus 264 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~-~~-~~~~~~~~~~~~~~~ll~~~gV~v~~g~~--~~~~ 339 (374)
T 2aeu_A 264 ERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRV-YK-DDTINIKKLIEIGFNLLKNYGIITITVAG--MPGA 339 (374)
T ss_dssp HHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEE-ES-SHHHHHHHHHHHHHHHHHHHCEECSTTSS--SCSS
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEee-cc-cccccccchHHHHHHHHHhCCEEEecCCC--CCCC
Confidence 344 4444445443 4554433444333322 11 111 12665555 56999986321 1334
Q ss_pred CCeEEEeecC-CCCHHHHHHHHHHHHHHHHHhC
Q 046230 437 LARARICISA-SHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 437 ~~~iRi~~~~-~~t~edid~~l~~l~~~~~~~~ 468 (489)
.+++||+++. ..+++++++++++|+++++++.
T Consensus 340 ~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 340 SKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp CCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999863 2334458999999999988764
No 207
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=3.1e-23 Score=212.15 Aligned_cols=285 Identities=16% Similarity=0.128 Sum_probs=204.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHH----HhcCCeEEEe-cCCCHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGA----RGSGATIRVF-QHNTPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~----~~~g~~~~~~-~~~d~~~ 219 (489)
.+...++++++|+++|.++++++++|++++..++.++.++|+.|++..+.|+++...+ +..|++++.+ +.+|+++
T Consensus 57 ~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 136 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEE 136 (421)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHH
T ss_pred ChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 4667899999999999988999999999998888888899999999999999987765 6779999999 9899999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
|++++++ ++.+|+++++++++|.+.|+++|.++|++||+++|+||+|+ ++|..+.. ++..+
T Consensus 137 l~~~i~~-------------~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~--~~g~~~~~----~~~~~ 197 (421)
T 2ctz_A 137 FLALTDE-------------KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFG--MGGYLLRP----LAWGA 197 (421)
T ss_dssp HHHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG--GGGTSCCG----GGGTC
T ss_pred HHHhhcc-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc--cccccCCc----cccCC
Confidence 9988753 45677789999999999999999999999999999999993 23333332 22334
Q ss_pred CCccEEEcccccccCCcc----eEEEeC--HHH----HHHHHhhC---C---------------------CcccccCCCH
Q 046230 300 ADVDIMMGTFTKSFGSCG----GYIAGS--KEL----IQYLKYTC---P---------------------AHLYATSISP 345 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G~i~~~--~~~----~~~l~~~~---~---------------------~~~~~~~~~p 345 (489)
|+++.|++|+++++| |+++.+ +++ .+.+.... + ...++..++|
T Consensus 198 ---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~ 274 (421)
T 2ctz_A 198 ---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP 274 (421)
T ss_dssp ---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred ---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 999999999998654 455542 222 22232110 0 0113346889
Q ss_pred HHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC------------------CCCCCeEEEEeC
Q 046230 346 PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG------------------DNDSPVMPIMLY 406 (489)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~------------------~~~~~~~~~~~~ 406 (489)
..++++...++.+ ..++++..++.+++.+.|++. ++..+. ...+.++.+.+.
T Consensus 275 ~~a~~~~~~l~~l---------~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~ 345 (421)
T 2ctz_A 275 FEAWVVLLGMETL---------SLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLK 345 (421)
T ss_dssp HHHHHHHHHHTTH---------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEET
T ss_pred HHHHHHHcCcchH---------HHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeC
Confidence 8888888887754 556777778999999999987 555431 234778888875
Q ss_pred CC-CcHHHHHHHHhhCCceEEee------cCCCcC--------------CCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 407 NP-AKIPAFSRECLRQNVAVVTV------AFPATP--------------LLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 407 ~~-~~~~~~~~~l~~~Gi~v~~~------~~p~~~--------------~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
.. .....+.+.|...++.+... ..|+.. ...+.+|++++. +|+|++++.|++++
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 346 GGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp THHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence 42 23344555554334333211 111111 124799999864 57777777777764
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.92 E-value=2.3e-23 Score=211.25 Aligned_cols=282 Identities=16% Similarity=0.180 Sum_probs=203.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHH-----hcCCeEEEecCCCHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGAR-----GSGATIRVFQHNTPSH 219 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~-----~~g~~~~~~~~~d~~~ 219 (489)
++...+|+++||++.|.+++++++||++|+.. +.++.++||.|++..+.|++....+. ..|.+++.++.+|+++
T Consensus 66 ~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 144 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAA 144 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHH
Confidence 56778999999999999999999999888866 56678999999999999997665543 3599999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCC
Q 046230 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDT 299 (489)
Q Consensus 220 Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p 299 (489)
|++++++ ++.+|++|++++++|.+.++++|+++|++||++||+||+|+.+.+.. ....
T Consensus 145 l~~~i~~-------------~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-------~~~~-- 202 (400)
T 3nmy_A 145 FKAAIRA-------------DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-------PLSL-- 202 (400)
T ss_dssp HHHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-------GGGG--
T ss_pred HHHHhcc-------------CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-------hhhc--
Confidence 9988753 45688889999999999999999999999999999999998443321 1222
Q ss_pred CCccEEEcccccccCCcc----e-EE-EeCHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHH
Q 046230 300 ADVDIMMGTFTKSFGSCG----G-YI-AGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373 (489)
Q Consensus 300 ~~~Di~~~t~sK~~g~~G----G-~i-~~~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (489)
++|+++.|++|+++++| | ++ +.++++++.+...... ++..++|..++.++..++.+ +.+.++
T Consensus 203 -g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~--~g~~~~~~~a~~~l~~l~~l---------~~r~~~ 270 (400)
T 3nmy_A 203 -GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNS--IGGVQGPFDSFLALRGLKTL---------PLRMRA 270 (400)
T ss_dssp -TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHH--HCCBCCHHHHHHHHHHHTTH---------HHHHHH
T ss_pred -CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHHhHhHH---------HHHHHH
Confidence 23899999999998653 6 44 4577888887765443 34458998888888877754 567888
Q ss_pred HHHHHHHHHHHHHhCC-Ce-ee-C---------------CCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeec-----
Q 046230 374 IRENSNFFRSELQKMG-FE-VL-G---------------DNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVA----- 429 (489)
Q Consensus 374 ~~~~~~~l~~~L~~~g-~~-v~-~---------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~----- 429 (489)
..++...+.+.|++.. +. +. + ...+.++++.+... .....|.+.|.-.++.+...+
T Consensus 271 ~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~ 350 (400)
T 3nmy_A 271 HCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLV 350 (400)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEE
T ss_pred HHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCccee
Confidence 8999999999998762 22 21 1 22367888877532 234456665554333322111
Q ss_pred -CCCc--------------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 046230 430 -FPAT--------------PLLLARARICISASHTKEDLIKALEVISRVGD 465 (489)
Q Consensus 430 -~p~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (489)
.|.. ....+.+|+++....+++ +++.|+++++
T Consensus 351 ~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~d----li~dl~~al~ 397 (400)
T 3nmy_A 351 NHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGD----LRGDLERALV 397 (400)
T ss_dssp ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHH----HHHHHHHHHC
T ss_pred eCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHH----HHHHHHHHHh
Confidence 1111 123578999997554444 4455555543
No 209
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.92 E-value=1.3e-23 Score=217.08 Aligned_cols=283 Identities=17% Similarity=0.174 Sum_probs=201.8
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHH----HHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~L 220 (489)
.+...++++.+++++|.++.+++++|++++..++. +.++||.|++..+.|+++... ++..|++++.++.+|+++|
T Consensus 132 ~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 210 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEV 210 (464)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 35788999999999999888999999998866665 778999999999999988653 4567999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
++.+.. ++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.|.+. . ....
T Consensus 211 ~~~i~~-------------~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~---~----~~~~--- 267 (464)
T 1ibj_A 211 AAAIGP-------------QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS---R----PLEL--- 267 (464)
T ss_dssp HHHCCS-------------SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC---C----GGGT---
T ss_pred HHHhcc-------------CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC---C----hhhc---
Confidence 887753 4567888999999999999999999999999999999999843221 1 1112
Q ss_pred CccEEEcccccccCCc-c---eEEEeC-HHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC-G---GYIAGS-KELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~-G---G~i~~~-~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (489)
++||++.|++|+++++ | |+++++ +++++.+..... .++...++..++++.++|+.+ +.+.++..
T Consensus 268 ~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~--~~g~~~~~~~~~a~~~al~~~---------~~r~~~~~ 336 (464)
T 1ibj_A 268 GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQN--SEGSGLAPFDCWLCLRGIKTM---------ALRIEKQQ 336 (464)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHH--HTTCBCCHHHHHHHHHHHTTH---------HHHHHHHH
T ss_pred CCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHH--hcCCCCCHHHHHHHHhchhhH---------HHHHHHHH
Confidence 3499999999999753 3 999988 578887765432 123347888888877777633 22333333
Q ss_pred HHHHHHHHHHHhC---------------CCeeeCCC---CCCeEEEEeCCCCcHHHHHHHHhhCCceEEeec------CC
Q 046230 376 ENSNFFRSELQKM---------------GFEVLGDN---DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVA------FP 431 (489)
Q Consensus 376 ~~~~~l~~~L~~~---------------g~~v~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~p 431 (489)
++...+.+.|++. ++.+..+. .+.++++.+........+.+.|...||.+.... .|
T Consensus 337 ~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p 416 (464)
T 1ibj_A 337 ENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMP 416 (464)
T ss_dssp HHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECT
T ss_pred HHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEeecCCCCceeeecc
Confidence 3333333444332 33333322 356777776421123457888877788776432 11
Q ss_pred ------Cc--------CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 432 ------AT--------PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 432 ------~~--------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.. ....+.+||+++. ||+++++++|+++++.
T Consensus 417 ~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 417 CFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp TTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 00 1225789999964 8999999999998864
No 210
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.92 E-value=1.7e-22 Score=211.58 Aligned_cols=302 Identities=16% Similarity=0.192 Sum_probs=207.5
Q ss_pred chhHHHHHHHHHHHhCCC----CEEEeCccHHHHHHhHhhhcC--------CC-----C-EEEEcCCCchHHHHHHHhcC
Q 046230 145 LMVHNELEECVARFVGKP----AAIVFGMGYVTNSAILPVLMR--------KG-----S-LIISDSLNHNSIVNGARGSG 206 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~~~al~~--------~g-----~-~Vl~~~~~h~~~~~~~~~~g 206 (489)
..+..++.+.+++++|.+ ..++.++|+++|..++.++.. +| + .|+++...|.++...++..|
T Consensus 131 ~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g 210 (504)
T 2okj_A 131 VLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALG 210 (504)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcC
Confidence 344556667778888865 345557788888666666532 34 5 78899999999999988887
Q ss_pred C---eEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc
Q 046230 207 A---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ~---~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa 278 (489)
. +++.++.+ |+++|++.|++...+| .++.+|++....+++|.+.|+++|.++|++||+++++|++
T Consensus 211 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g-------~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a 283 (504)
T 2okj_A 211 FGTDNVILIKCNERGKIIPADFEAKILEAKQKG-------YVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAA 283 (504)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTT-------CEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEET
T ss_pred CCcccEEEEecCCCCCCCHHHHHHHHHHHHHCC-------CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehh
Confidence 6 78888876 8999999998754432 2456777777788899999999999999999999999999
Q ss_pred cccccccCCCCccccccCCCCCCccEEEcccccccCCc-c-eEEEeCH-HHHHHHHhhCCCccccc--------------
Q 046230 279 HSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-G-GYIAGSK-ELIQYLKYTCPAHLYAT-------------- 341 (489)
Q Consensus 279 ~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~~~-~~~~~l~~~~~~~~~~~-------------- 341 (489)
|+.+.+.... ......++ ..+|+++.+++|+++.+ | |+++.++ ++++........+.++.
T Consensus 284 ~~~~~~~~~~-~~~~~~g~--~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 360 (504)
T 2okj_A 284 WGGGLLMSRK-HRHKLNGI--ERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKA 360 (504)
T ss_dssp TGGGGGGCTT-TGGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGS
T ss_pred hhhHHHhCHh-hHhhcCCc--ccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCC
Confidence 9955432111 01112223 24599989999999743 4 8888765 56654332222222111
Q ss_pred -----CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCCCeEEEEeCCC-----
Q 046230 342 -----SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLYNP----- 408 (489)
Q Consensus 342 -----~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~~~~~~~~~~~~~~----- 408 (489)
....+.+.++++++..- ..++.+++..++++++.+.|+++ |+++.. .+...++.+.....
T Consensus 361 ~~~~rr~~~l~~~a~l~~lg~~-------g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~ 433 (504)
T 2okj_A 361 IQCGRHVDIFKFWLMWKAKGTV-------GFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGV 433 (504)
T ss_dssp SCSSCBCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSC
T ss_pred CCCCCCccHHHHHHHHHHhhHH-------HHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccccc
Confidence 12344455555554321 46778889999999999999997 888875 33444455543211
Q ss_pred -----------CcHHHHHHHHhhCCceEEe-ecCCCcCCC-CCeEEEeec-CCCCHHHHHHHHHHHHHHHHHh
Q 046230 409 -----------AKIPAFSRECLRQNVAVVT-VAFPATPLL-LARARICIS-ASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 409 -----------~~~~~~~~~l~~~Gi~v~~-~~~p~~~~~-~~~iRi~~~-~~~t~edid~~l~~l~~~~~~~ 467 (489)
....++.+.|.++|+.+.. ..+ .+ .+++|+++. ..+|++||++++++|+++++++
T Consensus 434 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~----~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 434 PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQ----GDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEE----TTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEE----CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0135788899999965442 211 12 258999995 7899999999999999887653
No 211
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.92 E-value=1.9e-23 Score=213.61 Aligned_cols=283 Identities=15% Similarity=0.123 Sum_probs=207.9
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH----HHHhcCCeEEEecCCCHHHH
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~L 220 (489)
.+...+|++++|++.|.+.+++++||++|+..++.++.++||.|+++.+.|+++.. .+...|++++.++.+|+++|
T Consensus 81 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l 160 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAV 160 (430)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 56678999999999999999999999999988999999999999999999998877 55678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCC
Q 046230 221 EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300 (489)
Q Consensus 221 e~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~ 300 (489)
+++++. ++.+|+++++.|++|.+.++++|.++|+++|++||+|++|+.+.+. .... .
T Consensus 161 ~~ai~~-------------~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-------~~~~---~ 217 (430)
T 3ri6_A 161 EHACDE-------------TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-------EAKR---L 217 (430)
T ss_dssp HHHCCT-------------TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-------CGGG---G
T ss_pred HHhhCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-------ChHH---c
Confidence 988753 4567789999999999999999999999999999999999855431 1111 2
Q ss_pred CccEEEcccccccCCc----ceEEEe--CHHH------------------HHHHHhhCCCcccccCCCHHHHHHHHHHHH
Q 046230 301 DVDIMMGTFTKSFGSC----GGYIAG--SKEL------------------IQYLKYTCPAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 301 ~~Di~~~t~sK~~g~~----GG~i~~--~~~~------------------~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
++|+++.|++|.++++ ||+++. +..+ ++.++... ...++..++|..++.++..++
T Consensus 218 g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~-~~~~g~~~~~~~a~l~l~~l~ 296 (430)
T 3ri6_A 218 GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEV-FQNLGPSLSPHNAYLQSLGLE 296 (430)
T ss_dssp TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTH-HHHHCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHH-HHhcCCCCCHHHHHHHHhhhh
Confidence 2489999999999864 477773 3222 22222111 112445588888888888877
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe-eeCCC---------------CCC-eEEEEeCCCCcHHHHHHHH
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFE-VLGDN---------------DSP-VMPIMLYNPAKIPAFSREC 418 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-v~~~~---------------~~~-~~~~~~~~~~~~~~~~~~l 418 (489)
.+ ..++++..++...+.+.|++. ++. |.-+. .+. ++++.+.......+|.+.|
T Consensus 297 ~l---------~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l 367 (430)
T 3ri6_A 297 TM---------ALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDAL 367 (430)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHC
T ss_pred hH---------HHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhC
Confidence 55 567788889999999999887 443 32221 134 8888887444556677776
Q ss_pred hhCCceEEeecCCC--------------------cCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 419 LRQNVAVVTVAFPA--------------------TPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 419 ~~~Gi~v~~~~~p~--------------------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
...++.+...+..+ ....++.||+++.. |+.+.+++.|++++
T Consensus 368 ~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~----E~~~dl~~dl~~al 429 (430)
T 3ri6_A 368 KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI----EEIEDLKEDILQAL 429 (430)
T ss_dssp SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 65555443322111 01346789999863 55666666666654
No 212
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.92 E-value=1.7e-22 Score=212.09 Aligned_cols=305 Identities=15% Similarity=0.150 Sum_probs=207.9
Q ss_pred CcchhHHHHHHHHHHHhCCC--CEEEeCccHHHHHHhHhhhc--------CCCC------EEEEcCCCchHHHHHHHhcC
Q 046230 143 GTLMVHNELEECVARFVGKP--AAIVFGMGYVTNSAILPVLM--------RKGS------LIISDSLNHNSIVNGARGSG 206 (489)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~al~--------~~g~------~Vl~~~~~h~~~~~~~~~~g 206 (489)
+..++..++++.+++++|.+ ..++.++|+++|..++.++. .+|+ .|+++...|+++...++..|
T Consensus 145 ~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g 224 (515)
T 2jis_A 145 VFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLG 224 (515)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcC
Confidence 34566677888899999975 45556778888866666552 1454 88999999999999998888
Q ss_pred C---eEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc
Q 046230 207 A---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 207 ~---~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa 278 (489)
. +++.++.+ |+++|++.|++...+| .++.+|++....+++|.+.|+++|.++|++||+++++|++
T Consensus 225 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g-------~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a 297 (515)
T 2jis_A 225 LGTDSVRVVKADERGKMVPEDLERQIGMAEAEG-------AVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAA 297 (515)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTT-------CEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEET
T ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCC-------CCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehh
Confidence 7 88888865 8999999998754432 2456777778888999999999999999999999999999
Q ss_pred cccccccCCCCccccccCCCCCCccEEEcccccccC-Ccc-eEEEeCHH--HHHHHHhhCCCcc------------ccc-
Q 046230 279 HSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GYIAGSKE--LIQYLKYTCPAHL------------YAT- 341 (489)
Q Consensus 279 ~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~--~~~~l~~~~~~~~------------~~~- 341 (489)
|+.+.+.... ......++ .++|+++.+++|+++ +.| |+++.+++ +++........+. +++
T Consensus 298 ~~~~~~~~~~-~~~~~~g~--~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 374 (515)
T 2jis_A 298 WGGSVLLSQT-HRHLLDGI--QRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDK 374 (515)
T ss_dssp TGGGGGGCTT-TGGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGG
T ss_pred hhhHHHhChh-hHhhcCCC--ccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCC
Confidence 9955442111 11112233 244999999999997 445 88887765 6554211111111 000
Q ss_pred ------CCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCC-------
Q 046230 342 ------SISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYN------- 407 (489)
Q Consensus 342 ------~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~------- 407 (489)
....+.+.++++++..- ..++.+++..++++++.+.|+++ |+++..++....+.+....
T Consensus 375 ~~~~~rr~~al~~~~~l~~lg~~-------g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~ 447 (515)
T 2jis_A 375 VVQCGRRVDCLKLWLMWKAQGDQ-------GLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQ 447 (515)
T ss_dssp CSCSSCCCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCT
T ss_pred CCCCCCcccHHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccc
Confidence 11133333344443321 45778889999999999999998 8888766545555554421
Q ss_pred -CCc--------HHHHHHHHhhCCceEEeecCCCcCCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q 046230 408 -PAK--------IPAFSRECLRQNVAVVTVAFPATPLLLARARICI-SASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 408 -~~~--------~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~ 466 (489)
... ...+.+.|.++|+.+.... ..+...+.+|+++ +..+|++|+++++++|++++++
T Consensus 448 ~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~--~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 448 ESPDYHERLSKVAPVLKERMVKEGSMMIGYQ--PHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp TSTTHHHHHHTHHHHHHHHHHHHTSCEEEEE--EETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCEEEEEE--EECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 111 1136778888897664211 0112236899999 7889999999999999988754
No 213
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.92 E-value=1.2e-24 Score=217.50 Aligned_cols=323 Identities=13% Similarity=0.133 Sum_probs=216.5
Q ss_pred eeEecccccccCCCCCCccchHHHHHHHHHhC-CCCCCc---ccCCCcchhHHHHHHHHHHHhCCC--CEEEeCcc--HH
Q 046230 101 RCLNLGSYNYLGFAASDEYCTPRVIESLKKYS-PSTCSS---RVDGGTLMVHNELEECVARFVGKP--AAIVFGMG--YV 172 (489)
Q Consensus 101 ~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG--~~ 172 (489)
+++++. .|-...++.+.+++.+.++++. .+.... ....+..+...++++.+++++|.+ +.+++++| ++
T Consensus 3 ~~~~~~----~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~ 78 (360)
T 1w23_A 3 QVFNFN----AGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASL 78 (360)
T ss_dssp CCEECC----SSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred ceEeec----CCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchH
Confidence 455654 2222345788888888776541 111100 002234456789999999999975 46777655 46
Q ss_pred HHHHhHhhhcC---CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHH-HHHHHHhcCCCCCCCCCccE
Q 046230 173 TNSAILPVLMR---KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEE-VLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 173 a~~~~~~al~~---~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~-~l~~~~~~g~~~~~~~~~~~ 242 (489)
++..++.++.. +++.|+.+.++|.+.. .++..| +++.++.+ |+++|++ .+.. ++.
T Consensus 79 al~~~~~~l~~~~~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~-------------~~k 143 (360)
T 1w23_A 79 QFTMLPMNLLTKGTIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLNE-------------NDA 143 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCT-------------TEE
T ss_pred HHHHHHHHhcCCCCcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccCC-------------CCC
Confidence 66777777765 4667888877777643 356668 88877642 5666665 4421 344
Q ss_pred EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEE
Q 046230 243 MVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIA 321 (489)
Q Consensus 243 ~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~ 321 (489)
+|++.++.+++|.+.+ +++++||+++|+||+|+.|.. . .++ .+.|++++|++|.+|++| |+++
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~--~-------~~~--~~~di~~~s~sK~~~~~G~G~~~ 207 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSR--P-------LKV--NQFGMIYAGAQKNLGPSGVTVVI 207 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSS--C-------CCG--GGCSEEEEETTTTTSCTTCEEEE
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCC--C-------cCc--ccCCEEEEEcccccCCCCcEEEE
Confidence 5666788999998865 334489999999999985421 1 111 122799999999999878 9999
Q ss_pred eCHHHHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC-C
Q 046230 322 GSKELIQYLKYTCPAH----------LYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG-F 390 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 390 (489)
+++++++.+....... ....+.+...++++.++++.+.. .+..++.+++++++.+++.+.|++++ +
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 284 (360)
T 1w23_A 208 VKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKD---LGGAEAIAKQNEEKAKIIYDTIDESNGF 284 (360)
T ss_dssp EEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred EcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9998876654432110 01123566677777888887631 01346788999999999999999885 4
Q ss_pred -eee--CCCC-CCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 391 -EVL--GDND-SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 391 -~v~--~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
... +... +.++++.+.......++.+.|.++||.+.+.. . ..+++||+++..+|++++++++++|++++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~----~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 285 YVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGH-R----SVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp SEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCC-T----TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCC-C----CCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 443 2112 34777766543345678889999999886421 1 1468999998888999999999999988764
No 214
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=1.2e-23 Score=214.06 Aligned_cols=245 Identities=17% Similarity=0.225 Sum_probs=190.7
Q ss_pred hHHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcC-CCchHHHH-----------HHHhcCCeEEE
Q 046230 147 VHNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDS-LNHNSIVN-----------GARGSGATIRV 211 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~-~~h~~~~~-----------~~~~~g~~~~~ 211 (489)
...+|++.+|+++|.+.+++ ++||++|+..++.++.++||.|+++. +.|..+.. .++..|++++.
T Consensus 74 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 153 (427)
T 3i16_A 74 GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQ 153 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEE
T ss_pred HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEE
Confidence 36889999999999998888 89999999999999999999999998 88876653 23456889988
Q ss_pred ecC-----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC----cCCCCCCCCChHHHHHHHHH--cCcEEEEEcccc
Q 046230 212 FQH-----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG----IYSMEGELCKFPEIIAICKK--YKAYIYLDEAHS 280 (489)
Q Consensus 212 ~~~-----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~----v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s 280 (489)
++. .|+++|++++++. .++.+|++++ +.+++|.+.++++|+++|++ +|+++++|++|+
T Consensus 154 v~~~~~g~~D~e~l~~~l~~~-----------~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 154 VDLKEDGKPNLEEIEKVLKED-----------ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp CCCCTTSSCCHHHHHHHHHTC-----------TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred ecCccCCCcCHHHHHHHhhCC-----------CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 887 4899999988731 1455777787 89999999999999999999 999999999998
Q ss_pred cccccCCCCccccccCCCCCCccEEEcccccccCC----cceEEEeCHHHHHHHHhhCCCcccccCCCH-HH-HHHHHHH
Q 046230 281 IGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS----CGGYIAGSKELIQYLKYTCPAHLYATSISP-PA-AEQIISA 354 (489)
Q Consensus 281 ~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~----~GG~i~~~~~~~~~l~~~~~~~~~~~~~~p-~~-~aa~~a~ 354 (489)
.+.+.. .. .. .++||+++|++|.+|+ .|||+++++++++.++........+..+.| .. +..++..
T Consensus 223 ~~~~~~--~p----~~---~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~g 293 (427)
T 3i16_A 223 EFMDTK--EP----TD---VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQG 293 (427)
T ss_dssp TTSSSS--CG----GG---GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHH
T ss_pred cccccC--Cc----cc---cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHH
Confidence 443211 11 11 2349999999999986 359999999999998873221122222333 22 3444444
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCC-----eEEEEeCCCCcHHHHHHHHhhC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP-----VMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
|+. .+.+++++.+++.++.+.|+++|+.+.+. .++ ++++.+.+.....+|++.|...
T Consensus 294 l~~---------~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 294 LFL---------APHISMEALKGAILCSRIMELAGFEVMPK-YDEKRSDIIQSIKFNDKDKLIEFCKGIQTG 355 (427)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCEEEECSSHHHHHHHHHHHHHT
T ss_pred HHH---------HHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCccEEEEEEECCHHHHHHHHHHHhhc
Confidence 443 36788999999999999999999988654 455 8999998777788999999887
No 215
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.8e-23 Score=212.76 Aligned_cols=245 Identities=16% Similarity=0.235 Sum_probs=190.8
Q ss_pred hHHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcC-CCchHHH-----------HHHHhcCCeEEE
Q 046230 147 VHNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDS-LNHNSIV-----------NGARGSGATIRV 211 (489)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~-~~h~~~~-----------~~~~~~g~~~~~ 211 (489)
...+|++++|+++|.+.+++ ++||++|+..++.++.++||.|+++. +.|..+. ..++..|++++.
T Consensus 75 g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 154 (427)
T 3hvy_A 75 GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKM 154 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEE
T ss_pred hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEE
Confidence 36889999999999999988 79999999999999999999999998 8887654 234556899999
Q ss_pred ecC----CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC----cCCCCCCCCChHHHHHHHHH--cCcEEEEEccccc
Q 046230 212 FQH----NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG----IYSMEGELCKFPEIIAICKK--YKAYIYLDEAHSI 281 (489)
Q Consensus 212 ~~~----~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~----v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s~ 281 (489)
++. .|++++++++++. .++.+|++++ +.+++|.+.++++|+++|++ +|+++++|++|+.
T Consensus 155 v~~~~~~~d~e~l~~~i~~~-----------~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~ 223 (427)
T 3hvy_A 155 VDLKDGKVDINTVKEELKKD-----------DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGE 223 (427)
T ss_dssp CCCBTTBCCHHHHHHHHHHC-----------TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCT
T ss_pred ecCCCCCcCHHHHHHHhhCC-----------CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccc
Confidence 888 6999999998741 1445777787 88999999999999999999 8999999999984
Q ss_pred ccccCCCCccccccCCCCCCccEEEcccccccCC----cceEEEeCHHHHHHHHhh--CCCcccccCCCHHHHHHHHHHH
Q 046230 282 GAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS----CGGYIAGSKELIQYLKYT--CPAHLYATSISPPAAEQIISAI 355 (489)
Q Consensus 282 g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~----~GG~i~~~~~~~~~l~~~--~~~~~~~~~~~p~~~aa~~a~L 355 (489)
+.++. .. .. .++||+++|++|.+|+ .||++++++++++.++.. ........+.++..+..++..|
T Consensus 224 ~~~~~--~p----~~---~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl 294 (427)
T 3hvy_A 224 FVEEK--EP----TD---VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL 294 (427)
T ss_dssp TTSSS--CG----GG---GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH
T ss_pred cccCC--CC----cc---cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH
Confidence 43221 11 11 2349999999999986 359999999999998873 2332222222222244455555
Q ss_pred HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCC-----eEEEEeCCCCcHHHHHHHHhhC
Q 046230 356 KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP-----VMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
+. .+.+++++.+++.++.+.|+++|+.+.+. .++ ++++.+.++....+|++.|...
T Consensus 295 ~~---------~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~li~~~~l~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 295 FM---------APHVTIEAVKGAVFCARIMELAGFDVLPK-YNDKRTDIIQAIKFNDEKKLIDFIKGIQTA 355 (427)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred hH---------HHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence 53 36788899999999999999999988654 455 8999998777778899998875
No 216
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.92 E-value=2.6e-22 Score=202.16 Aligned_cols=311 Identities=17% Similarity=0.126 Sum_probs=220.4
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHH-HHHhC-CCCEEEeCccHHHHHHhHhhh-cCCCCEEEEcCC
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECV-ARFVG-KPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSL 193 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l-a~~~g-~~~~i~~~sG~~a~~~~~~al-~~~g~~Vl~~~~ 193 (489)
++++.+++.+.++.-..+ ...+...++++++ |+++| .+..+++++|++++..++.++ .++||.|+++.+
T Consensus 15 ~~~i~~a~~~~~~~~~~~--------~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~ 86 (377)
T 3ju7_A 15 VIEYLDELKEIDASHIYT--------NYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSF 86 (377)
T ss_dssp GGGGHHHHHHHHHHTCCS--------SSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESS
T ss_pred cHHHHHHHHHHHHcCCcc--------cCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 467899999998762111 1134568999999 99999 788999999999998888887 899999999999
Q ss_pred CchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCC-ccEEEEEcCcCCCCCCCCChHHHHHHH
Q 046230 194 NHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPW-KKIMVIVEGIYSMEGELCKFPEIIAIC 266 (489)
Q Consensus 194 ~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~-~~~~vive~v~s~~G~~~~l~~i~~l~ 266 (489)
.|.++...+...|++++.++.+ |++++++++... + ++.+|+ +.+++|...++++|.++|
T Consensus 87 ~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-----------~~~tk~v~---~~~~~G~~~~~~~i~~la 152 (377)
T 3ju7_A 87 TFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEEL-----------KEEVAIVV---PYATFGSWMNLEEYEELE 152 (377)
T ss_dssp SCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHH-----------GGGEEEEC---CBCGGGBCCCCHHHHHHH
T ss_pred CcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcC-----------CCCceEEE---EECCCCCccCHHHHHHHH
Confidence 9999999999999999888754 889999988431 2 133444 234578999999999999
Q ss_pred HHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEccc--ccccCCc-ceEEEe-CHHHHHHHHhhCCC------
Q 046230 267 KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTF--TKSFGSC-GGYIAG-SKELIQYLKYTCPA------ 336 (489)
Q Consensus 267 ~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~--sK~~g~~-GG~i~~-~~~~~~~l~~~~~~------ 336 (489)
+ +|++||+|++|++|... .++. .|-... |+.+.|| +|.+++. ||+++. ++++.+.++.....
T Consensus 153 ~-~~~~vi~D~a~a~g~~~-~~~~----~g~~~~--d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~ 224 (377)
T 3ju7_A 153 K-KGVPVVVDAAPGFGLMN-GGMH----YGQDFS--GMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNR 224 (377)
T ss_dssp H-TTCCBEEECTTCTTCEE-TTEE----TTTTCS--SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTS
T ss_pred h-cCCEEEEECCCccCCeE-CCEe----ccCCCC--cEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCC
Confidence 9 99999999999976431 1211 110001 4554465 6999761 277766 56777776654321
Q ss_pred ----cccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC---CeeeCCCC---C-CeEEEEe
Q 046230 337 ----HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG---FEVLGDND---S-PVMPIML 405 (489)
Q Consensus 337 ----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~v~~~~~---~-~~~~~~~ 405 (489)
..+...++++.++.++..|+.+ +...++.+++.+++.+.|++++ ..+..... . .++++.+
T Consensus 225 ~~~~~g~~~~~~~~~aa~~~~~l~~l---------~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (377)
T 3ju7_A 225 ECTMMGFNCKMSEYAAAIGIATMKKW---------DDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILC 295 (377)
T ss_dssp CBCSSCCBCCCCHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEEC
T ss_pred ceeeccccCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEe
Confidence 1123458888888888888744 6788888889999999999884 22322211 1 1335555
Q ss_pred CCCCcHHHHHHHHhhCCceEEeecCCCcCC------------------CCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 406 YNPAKIPAFSRECLRQNVAVVTVAFPATPL------------------LLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~------------------~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.......++.+.|.++||.+....++.... ....+||.+...+|++|++++++.|.+++..
T Consensus 296 ~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 296 PEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp CTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred CChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 444447889999999999887432121100 1247999998899999999999999877654
No 217
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=9.9e-23 Score=210.36 Aligned_cols=325 Identities=13% Similarity=0.005 Sum_probs=221.2
Q ss_pred CccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHhCCCC-------EEEeCccHHHHHHhHhhhcC------
Q 046230 117 DEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPA-------AIVFGMGYVTNSAILPVLMR------ 183 (489)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~~~~al~~------ 183 (489)
+|.+.+++.+++.+...... ...+..++..++++.+++++|.+. .+++++|++++..++.++..
T Consensus 55 ~~~v~e~~~~a~~~~~~~~~---~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 55 DENVHKLMDLSINKNWIDKE---EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccCCCChh---hChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777777766654322211 122455667788888899998752 46667888888766666542
Q ss_pred --CC-----CEEEEcCCCchHHHHHHHhcCCeEEEecCC------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcC
Q 046230 184 --KG-----SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIY 250 (489)
Q Consensus 184 --~g-----~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~ 250 (489)
+| +.|++.. .|.++...++..|++++.++.+ |+++|++.|.+ ++.+|++....
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-------------~t~~v~~~~~~ 197 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE-------------NTIGVVPTFGV 197 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT-------------TEEEEECBBSC
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh-------------CCEEEEEEcCC
Confidence 33 5888888 9999999999999999998764 78888887754 34566666667
Q ss_pred CCCCCCCChHHHHHHHHHc------CcEEEEEcccccccc---cCCCCccccccCCCCCCccEEEcccccccC-Ccc-eE
Q 046230 251 SMEGELCKFPEIIAICKKY------KAYIYLDEAHSIGAV---GKTGRGVCELLEVDTADVDIMMGTFTKSFG-SCG-GY 319 (489)
Q Consensus 251 s~~G~~~~l~~i~~l~~~~------~~~li~DEa~s~g~~---g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g-~~G-G~ 319 (489)
+++|.+.|+++|.++|++| |+++++|++|+.+.. ....+ +.+...++|+++.+++|++. +.| |+
T Consensus 198 n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 198 TYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-----WDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp TTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-----CSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred cCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-----hhcCCCCCcEEEECcccccCCCCCeEE
Confidence 7899999999999999996 999999999984322 22111 11222356888889999763 334 88
Q ss_pred EEeCH-HHH-HHHHhhCCCcc------cc--cCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 046230 320 IAGSK-ELI-QYLKYTCPAHL------YA--TSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM- 388 (489)
Q Consensus 320 i~~~~-~~~-~~l~~~~~~~~------~~--~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (489)
++.++ +++ +.+... ..+. ++ .+.+.....+..++++.+. ....++.+++..++++++.+.|+++
T Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg----~~g~~~~~~~~~~~a~~l~~~L~~~~ 347 (452)
T 2dgk_A 273 VIWRDEEALPQELVFN-VDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG----REGYTKVQNASYQVAAYLADEIAKLG 347 (452)
T ss_dssp EEESSGGGSCGGGCEE-ECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCHHHHHHHhccC-ccccCCCCCCcccCCCChhHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88864 333 433211 1111 00 0112212333344454441 1145778889999999999999998
Q ss_pred CCeeeCC----CCCCeEEEEeCCC----CcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHH
Q 046230 389 GFEVLGD----NDSPVMPIMLYNP----AKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVI 460 (489)
Q Consensus 389 g~~v~~~----~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (489)
++++..+ ...+++.+.+... ....++.+.|.++|+.+.....|....+.+.+|+++...+|++|++++++.|
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l 427 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDY 427 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHH
Confidence 5877643 3456777766542 2347899999999997654333433334578999999889999999999999
Q ss_pred HHHHHHhC
Q 046230 461 SRVGDLVG 468 (489)
Q Consensus 461 ~~~~~~~~ 468 (489)
+++++.++
T Consensus 428 ~~~~~~~~ 435 (452)
T 2dgk_A 428 KASLKYLS 435 (452)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 218
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=1.7e-22 Score=219.79 Aligned_cols=308 Identities=14% Similarity=0.097 Sum_probs=216.5
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------- 215 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------- 215 (489)
......++++.+++++|.++.+++++|+ ++|..++.+++++||.|+++.++|.++..++...|+.++.++.+
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~ 282 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGII 282 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCB
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccc
Confidence 3456788999999999999888888886 55799999999999999999999999999999999999887642
Q ss_pred --------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccc-cccC
Q 046230 216 --------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIG-AVGK 286 (489)
Q Consensus 216 --------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g-~~g~ 286 (489)
|+++|+++|++.... ...++++.++++++.+ +++|.+.++++|.++|++||++|++||||+.+ .++.
T Consensus 283 g~i~~~~~d~e~le~~i~~~~~~--k~~~~~~~klvil~~p--n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~ 358 (755)
T 2vyc_A 283 GPIYPQEMQPETLQKKISESPLT--KDKAGQKPSYCVVTNC--TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP 358 (755)
T ss_dssp CCCCGGGGSHHHHHHHHHHCTTT--GGGTTCCCSCEEEESS--CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCG
T ss_pred cccCcCCCCHHHHHHHHHhCccc--cccccCCCeEEEEECC--CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCc
Confidence 788999988752000 0001123346666665 46899999999999999999999999999732 1222
Q ss_pred CCCccccccC--CC-CCCccEEEcccccccCCc--ceEEEeCHH--HH--HHHHhhCCCcccccCCCHHHHHHHHHHHHH
Q 046230 287 TGRGVCELLE--VD-TADVDIMMGTFTKSFGSC--GGYIAGSKE--LI--QYLKYTCPAHLYATSISPPAAEQIISAIKV 357 (489)
Q Consensus 287 ~G~~~~~~~~--v~-p~~~Di~~~t~sK~~g~~--GG~i~~~~~--~~--~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (489)
..++.....+ .+ ..+.+|++.|+||+++++ ||+++.+++ .+ ..+..... ...+++.+.+.+++..++++.
T Consensus 359 ~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~-~~~s~sp~~~~iaal~aA~~~ 437 (755)
T 2vyc_A 359 IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYM-MHATTSPLYAICASNDVAVSM 437 (755)
T ss_dssp GGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHH-HTSCSSCCHHHHHHHHHHHHH
T ss_pred ccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHH
Confidence 2111111123 22 122345889999999754 377766543 11 22222111 112345788888888888888
Q ss_pred HHccCCCchHHHHHHHHHHHHHHHHHHHHhC-C---------CeeeCCC-------------------------------
Q 046230 358 ILGEDGSSRGAQKLARIRENSNFFRSELQKM-G---------FEVLGDN------------------------------- 396 (489)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g---------~~v~~~~------------------------------- 396 (489)
+.. ..+++.++++.++.+++++.|+++ | +.+.++.
T Consensus 438 l~~----~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (755)
T 2vyc_A 438 MDG----NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMH 513 (755)
T ss_dssp HST----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCC
T ss_pred HHh----hhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccC
Confidence 732 125778999999999999999886 4 4443321
Q ss_pred ------------CC------CeEEEEeCC----------CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCC
Q 046230 397 ------------DS------PVMPIMLYN----------PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASH 448 (489)
Q Consensus 397 ------------~~------~~~~~~~~~----------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~ 448 (489)
.+ ..+.+.+.. ......+.+.|.++||.+.. .+.+.+|++++...
T Consensus 514 ~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~-------~~~~~v~~~~~~g~ 586 (755)
T 2vyc_A 514 PGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR-------TTDFQIMFLFSMGV 586 (755)
T ss_dssp TTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSE-------ECSSEEEEECCTTC
T ss_pred cccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEee-------cCCCeEEEEECCCC
Confidence 11 233443431 23446888999889988752 23578999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q 046230 449 TKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 449 t~edid~~l~~l~~~~~~~ 467 (489)
|++++++++++|.++.+..
T Consensus 587 t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 587 TRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp CTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987654
No 219
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=2.3e-23 Score=214.50 Aligned_cols=286 Identities=14% Similarity=0.074 Sum_probs=201.5
Q ss_pred chhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecC--CCH----
Q 046230 145 LMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH--NTP---- 217 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~--~d~---- 217 (489)
.....++++.+|+ +|.++.+++++|+ +++..++.++.++|+.|+++.++|.++..++...|+.++.++. ++-
T Consensus 56 ~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~ 134 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHY 134 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSE
T ss_pred chHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcC
Confidence 4456889999999 9988778887775 6678889999999999999999999999999999999888766 321
Q ss_pred --HHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCcccccc
Q 046230 218 --SHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL 295 (489)
Q Consensus 218 --~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~ 295 (489)
-++++++. ++.++++++. .+.+|.+.++++|.++|++||++||+||+|+. .++..+. .....
T Consensus 135 ~~~d~~~l~~------------~~~~~v~~~~--~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~-~~~~~ 198 (446)
T 2x3l_A 135 NKVNLSRLNN------------DGHKLVVLTY--PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF-PDSTL 198 (446)
T ss_dssp EEEEC-------------------CCEEEEES--SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS-CCCGG
T ss_pred CCCCHHHHcC------------CCceEEEEEC--CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC-CCChH
Confidence 12232211 1345555554 45599999999999999999999999999984 2333333 11222
Q ss_pred CCCCCCccEEEcccccccC-Ccc-eEEEeCHHHHH--HHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHH
Q 046230 296 EVDTADVDIMMGTFTKSFG-SCG-GYIAGSKELIQ--YLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKL 371 (489)
Q Consensus 296 ~v~p~~~Di~~~t~sK~~g-~~G-G~i~~~~~~~~--~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~ 371 (489)
...+ |+++.|++|+++ +.| |++++++++++ .+...... ..+++.+...++++.++++.+... ..++..
T Consensus 199 ~~g~---Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~-~~~~s~~~~~~aal~~a~~~l~~~----g~~~~~ 270 (446)
T 2x3l_A 199 NYQA---DYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSY-FQTSSPSYLIMASLESAAQFYKTY----DSTLFF 270 (446)
T ss_dssp GGTC---SEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHH-HSCSSCCHHHHHHHHHHHHHHHHC----CCHHHH
T ss_pred HcCC---CEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHh----CHHHHH
Confidence 2223 899999999664 445 99988877654 33221111 112346777777777777777421 123367
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHH
Q 046230 372 ARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKE 451 (489)
Q Consensus 372 ~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~e 451 (489)
++..++.+++++. |+.+....+...+++.+. .....++.+.|.++||.+... +.+++|++++..+|++
T Consensus 271 ~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~-~~~~~~l~~~L~~~GI~v~~~-------g~~~iRi~~~~~~t~e 338 (446)
T 2x3l_A 271 AKRAQLIECLENK----GFEMLQVDDPLKLLIKYE-GFTGHDIQNWFMNAHIYLELA-------DDYQALAILPLWHHDD 338 (446)
T ss_dssp HHHHHHHHHHHHH----TCEEEECSSTTEEEEECT-TSCHHHHHHHHHHTTEEESEE-------CSSCEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHc----CCEECcCCCCeEEEEEeC-CcCHHHHHHHHHHCCCEEEec-------CCCEEEEEeecCCCHH
Confidence 7777788887776 777765443345566554 445678999999999988521 2367999999888999
Q ss_pred HHHHHHHHHHHHHHHhC
Q 046230 452 DLIKALEVISRVGDLVG 468 (489)
Q Consensus 452 did~~l~~l~~~~~~~~ 468 (489)
++ +++++|+++++.+.
T Consensus 339 ~i-~l~~aL~~~~~~~~ 354 (446)
T 2x3l_A 339 TY-LFDSLLRKIEDMIL 354 (446)
T ss_dssp CC-CHHHHHHHHHTCCC
T ss_pred HH-HHHHHHHHHHHhhc
Confidence 99 99999999987653
No 220
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=5.6e-22 Score=204.89 Aligned_cols=297 Identities=12% Similarity=0.153 Sum_probs=200.4
Q ss_pred chhHHHHHHHHHHHhCCCCEEEe-CccH-HHHHHhHhhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C--
Q 046230 145 LMVHNELEECVARFVGKPAAIVF-GMGY-VTNSAILPVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQH---N-- 215 (489)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~-~sG~-~a~~~~~~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~-- 215 (489)
.....++++.+++++|.+..+++ ++|+ .+|..++.++.. +++.|++..+.|.++...++..|++++.++. +
T Consensus 132 ~~~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~ 211 (456)
T 2z67_A 132 YALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDR 211 (456)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCC
Confidence 45667799999999998753444 5566 345545555433 6788888888999999999999999888764 2
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccc
Q 046230 216 ---TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVC 292 (489)
Q Consensus 216 ---d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~ 292 (489)
|+++|+++|++.... .+..+|++....+++|.+.|+++|.++|+++|+++++||+|+...+|.. ..
T Consensus 212 ~~~d~~~l~~~i~~~~~~--------~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~---~~ 280 (456)
T 2z67_A 212 VYVPVEDIENAIKKEIEL--------GNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYL---EK 280 (456)
T ss_dssp EECCHHHHHHHHHHHHHT--------TCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHH---HH
T ss_pred CCcCHHHHHHHHHHHhhC--------CCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhh---HH
Confidence 899999999321111 2445566666667899999999999999999999999999873322110 00
Q ss_pred cccCCCCCCccEEEccccccc-CCcc-eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHH
Q 046230 293 ELLEVDTADVDIMMGTFTKSF-GSCG-GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQ 369 (489)
Q Consensus 293 ~~~~v~p~~~Di~~~t~sK~~-g~~G-G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (489)
....+. ..+|+++.|++|++ ++.| |+++. ++++++.+.....+. .+.++ ..++.+++..+. ....++
T Consensus 281 ~~~~~~-~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g~---~~~~~--~~~~~aal~~l~----~~~~~~ 350 (456)
T 2z67_A 281 LKKAFK-YRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGR---ASATP--VVNTLVSLLSMG----SKNYLE 350 (456)
T ss_dssp HHHHHT-SCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCSC---BCSHH--HHHHHHHHHHHH----HHHHHH
T ss_pred HHHhhC-CCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCCC---CCCCH--HHHHHHHHHHHH----HHHHHH
Confidence 000111 14589999999986 4445 99988 578888775332221 11222 333444444441 114577
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCce-EEee-------cCCCcCCCC
Q 046230 370 KLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVA-VVTV-------AFPATPLLL 437 (489)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~-------~~p~~~~~~ 437 (489)
..++..++.+++.+.|+++ |+.+..+. +++++.+..+....++.+.|.++|+. +... +........
T Consensus 351 ~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~ 428 (456)
T 2z67_A 351 LVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTH 428 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccccccCc
Confidence 8899999999999999987 87766554 45555552222246789999999862 2222 100001224
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 438 ARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+++|++++..+|++|+|+++++|++++
T Consensus 429 ~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 429 DYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred chhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 789999988899999999999998654
No 221
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.90 E-value=3.9e-22 Score=202.42 Aligned_cols=283 Identities=16% Similarity=0.136 Sum_probs=193.3
Q ss_pred HHHHHHHHHHh-CC------CC--EEEeCccH-HHHHHhHhhhcC--CCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-
Q 046230 149 NELEECVARFV-GK------PA--AIVFGMGY-VTNSAILPVLMR--KGSLIISDSLNHNSIVNGARGSGATIRVFQHN- 215 (489)
Q Consensus 149 ~~l~~~la~~~-g~------~~--~i~~~sG~-~a~~~~~~al~~--~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~- 215 (489)
.+|++.+++++ +. ++ .+++++|+ ++...++.++.. + |.|+++.|+|..+...++..|++++.++..
T Consensus 75 ~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 153 (405)
T 3k7y_A 75 EDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFD 153 (405)
T ss_dssp HHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEE
T ss_pred HHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccc
Confidence 78888888886 22 12 34555554 555777777777 8 999999999999999999999999988751
Q ss_pred ------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 216 ------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 216 ------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
|+++|++.+.+. +.++++++..+.+|++|...+ +++|+++|++|++++|+||+|. .|..
T Consensus 154 ~~~~~~d~~~l~~~l~~~----------~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~--~l~~ 221 (405)
T 3k7y_A 154 YNLIDINYDLFLNDLRNI----------PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ--GFGH 221 (405)
T ss_dssp TTTTEECHHHHHHHHHHS----------CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT--TTSS
T ss_pred cccCCcCHHHHHHHHHhC----------CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc--cccC
Confidence 788998888752 123445555566899998866 7789999999999999999998 6654
Q ss_pred CCC--c---cccccCCCCCCccEEEcccccccCCcc---eEEEe---CHHHHHHHHh----hCCCcccccCCCHHHHHHH
Q 046230 287 TGR--G---VCELLEVDTADVDIMMGTFTKSFGSCG---GYIAG---SKELIQYLKY----TCPAHLYATSISPPAAEQI 351 (489)
Q Consensus 287 ~G~--~---~~~~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~---~~~~~~~l~~----~~~~~~~~~~~~p~~~aa~ 351 (489)
.+. . ....... .+.-|+++||||.|+.+| ||+++ ++++++.+.. .... .++ +.+...++++
T Consensus 222 ~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~q~~~ 297 (405)
T 3k7y_A 222 TNLEEDVLLIRKFEEK--NIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRK-FYS-SPVIHTNRIL 297 (405)
T ss_dssp SSTTGGGHHHHHHHTT--TCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHT-TTS-SCCHHHHHHH
T ss_pred CCcccchHHHHHHHhc--CCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhc-ccC-CCcHHHHHHH
Confidence 321 1 1111121 123588999999999889 99753 6766655432 1111 121 2344555555
Q ss_pred HHHHHH--HHccCCCchHHHHHHHHHHHHHHHHHHHH----hCC----CeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhC
Q 046230 352 ISAIKV--ILGEDGSSRGAQKLARIRENSNFFRSELQ----KMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 352 ~a~L~~--i~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
.++|+. +.+ ....+....+++++++.+++.+.|+ ++| +.+..+.++.++++.+. .+++++|.++
T Consensus 298 ~~~l~~~~l~~-~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~-----~~~~~~L~~~ 371 (405)
T 3k7y_A 298 CQLLNNQNLKL-NWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLL-----AKIAEHLKTH 371 (405)
T ss_dssp HHHHHCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGG-----GGGTTTTTTT
T ss_pred HHHhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCC-----HHHHHHHHHC
Confidence 555431 000 0001345567778999999999999 776 46666777766554332 1455677667
Q ss_pred CceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 422 NVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 422 Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
||.+.| . -||+++ ..++++|++++++|.++++.
T Consensus 372 gV~v~p-------~----~Ris~a-~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 372 HIYIIN-------N----GRINVS-GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp TEECCT-------T----SEEEGG-GCCTTHHHHHHHHHHHHHHC
T ss_pred CEeecC-------C----CeEEEe-ccCHHHHHHHHHHHHHHHhh
Confidence 999883 1 199984 57889999999999998764
No 222
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.90 E-value=3.1e-21 Score=200.99 Aligned_cols=342 Identities=13% Similarity=0.047 Sum_probs=218.2
Q ss_pred cccccCCCCCCccchHHHHHHHHHh-CCCCCCcccCCCcchhHHHHHHHHHHHhCCCC-----------EEEeCccHHHH
Q 046230 107 SYNYLGFAASDEYCTPRVIESLKKY-SPSTCSSRVDGGTLMVHNELEECVARFVGKPA-----------AIVFGMGYVTN 174 (489)
Q Consensus 107 s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~ 174 (489)
+..|+++-...+.....+.+.+..+ ..+........+...+..++.+.+++++|.+. .+++++||++|
T Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~ 152 (486)
T 1js3_A 73 SPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEAT 152 (486)
T ss_dssp STTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHH
T ss_pred CCCceEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHH
Confidence 4455665544344444455555443 32222221111233444455566677778763 46778889998
Q ss_pred HHhHhhhcCC---------C---------C-EEEEcCCCchHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhc
Q 046230 175 SAILPVLMRK---------G---------S-LIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAE 230 (489)
Q Consensus 175 ~~~~~al~~~---------g---------~-~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~ 230 (489)
..++.++..+ | + +|+++.+.|.++...++..|+.++.++.+ |+++|+++|.+...+
T Consensus 153 ~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~ 232 (486)
T 1js3_A 153 LVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAA 232 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhC
Confidence 6555544211 2 3 48889999999999999999999999875 899999999875332
Q ss_pred CCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccc-CCCCccccccCCCCCCccEEEccc
Q 046230 231 GQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVG-KTGRGVCELLEVDTADVDIMMGTF 309 (489)
Q Consensus 231 g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g-~~G~~~~~~~~v~p~~~Di~~~t~ 309 (489)
| ....+|++....+++|.+.|+++|.++|++||+++++|++|+.+.+- +..+.. ..++ ..+|+++.++
T Consensus 233 g-------~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~--~~g~--~~adsi~~~~ 301 (486)
T 1js3_A 233 G-------LIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHL--LNGV--EFADSFNFNP 301 (486)
T ss_dssp T-------CEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGG--GTTG--GGCSEEEECH
T ss_pred C-------CCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHH--hcCc--cccCeeEEch
Confidence 2 12245555556688999999999999999999999999999854432 122221 1233 2458888899
Q ss_pred ccccCCc-c-eEEEeCH-HH-HHHHHhhCCCcc---------------cccC-CCHHHHHHHHHHHHHHHccCCCchHHH
Q 046230 310 TKSFGSC-G-GYIAGSK-EL-IQYLKYTCPAHL---------------YATS-ISPPAAEQIISAIKVILGEDGSSRGAQ 369 (489)
Q Consensus 310 sK~~g~~-G-G~i~~~~-~~-~~~l~~~~~~~~---------------~~~~-~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (489)
+|+++.+ | |+++.++ .. .+.+... ..+. ++.. ..+..+.+..++++.+- ....++
T Consensus 302 hK~~~~p~~~G~l~~~~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g----~~g~~~ 376 (486)
T 1js3_A 302 HKWLLVNFDCSAMWVKRRTDLTGAFKLD-PVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG----VKGLQA 376 (486)
T ss_dssp HHHSSCCSSCEEEEESCHHHHHGGGC-------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH----HHHHHH
T ss_pred hhhcCCCcceEEEEEeCHHHHHHHhcCC-chhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh----HHHHHH
Confidence 9999753 4 8887754 32 3333110 0000 0000 00112233334444331 125677
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCC-cHHHHHHHHhhCCceEE-eecCCCcCCCCCeEEEee-c
Q 046230 370 KLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA-KIPAFSRECLRQNVAVV-TVAFPATPLLLARARICI-S 445 (489)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~-~~~~p~~~~~~~~iRi~~-~ 445 (489)
.+++..++.+++.+.|+++ |+.+..++...++.+.+.... ...++.+.|.++|+.+. +..+ .+.+.+|+++ +
T Consensus 377 ~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~lRi~~~~ 452 (486)
T 1js3_A 377 YIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRL----RGQFVLRFAICS 452 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEE----TTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEE----CCEEEEEEEeCC
Confidence 8888999999999999998 888876555667776664321 24678899998886543 2221 2457899997 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhC
Q 046230 446 ASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 446 ~~~t~edid~~l~~l~~~~~~~~ 468 (489)
...|++|+++++++|+++++++.
T Consensus 453 ~~~t~~di~~~~~~l~~~~~~~~ 475 (486)
T 1js3_A 453 RKVESGHVRLAWEHIRGLAAELL 475 (486)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999987764
No 223
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=1.4e-22 Score=207.22 Aligned_cols=244 Identities=15% Similarity=0.179 Sum_probs=186.1
Q ss_pred hhHHHHHHHHHHHhCCCCEEE---eCccHHHHHHhHhhhcCCCCEEEEcC-CCchHHHHHHHh----------cCCeEEE
Q 046230 146 MVHNELEECVARFVGKPAAIV---FGMGYVTNSAILPVLMRKGSLIISDS-LNHNSIVNGARG----------SGATIRV 211 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~~~~al~~~g~~Vl~~~-~~h~~~~~~~~~----------~g~~~~~ 211 (489)
....++++.+++++|.+.+.+ ++||++|+..++.++.++||.|+++. +.|+++...+.+ .|++++.
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 456889999999999987766 89999999999999999999999998 999998866643 6889999
Q ss_pred ecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC----cCCCCCCCCChHHHHHHHHH--cCcEEEEEcccc
Q 046230 212 FQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG----IYSMEGELCKFPEIIAICKK--YKAYIYLDEAHS 280 (489)
Q Consensus 212 ~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~----v~s~~G~~~~l~~i~~l~~~--~~~~li~DEa~s 280 (489)
++++ |+++|++++++ ++.+|++++ +.++.|...++++|+++|++ +|++||+||+|+
T Consensus 145 v~~~~~~~~d~e~l~~~l~~-------------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~ 211 (431)
T 3ht4_A 145 VPLTEGGLVDFEAVAAAIHS-------------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYG 211 (431)
T ss_dssp CCBCTTSSBCHHHHHHHCCT-------------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred eCCCCCCCcCHHHHHhhcCC-------------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCCh
Confidence 9884 89999988753 445677775 66777778889999999999 999999999999
Q ss_pred cccccCCCCccccccCCCCCCccEEEcccccccCC----cceEEEeCHHHHHHHHhhCC--CcccccCCCHHHHHHHHHH
Q 046230 281 IGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS----CGGYIAGSKELIQYLKYTCP--AHLYATSISPPAAEQIISA 354 (489)
Q Consensus 281 ~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~----~GG~i~~~~~~~~~l~~~~~--~~~~~~~~~p~~~aa~~a~ 354 (489)
.+ ...... ... ++|++++|++|++|+ +||++++++++++.++.... +.....+.++..+.+++..
T Consensus 212 ~~--~~~~~~----~~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~ 282 (431)
T 3ht4_A 212 EF--IEEQEP----CHV---GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQG 282 (431)
T ss_dssp TT--SSSCCG----GGT---TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHH
T ss_pred hh--ccCCCc----ccc---CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhH
Confidence 44 322221 111 238999999999753 56999999999998876322 2211112222224445555
Q ss_pred HHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCC-----eEEEEeCCCCcHHHHHHHHhhC
Q 046230 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP-----VMPIMLYNPAKIPAFSRECLRQ 421 (489)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~ 421 (489)
++.+ +.+++++.++++++.+.|+++|+.+.+. .+. ++++.+.++....+|++.|.+.
T Consensus 283 l~~~---------~~~~~~~~~~a~~l~~~L~~~g~~v~p~-~~~~~~~li~~i~l~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 283 FFLA---------PHVAGQALKGAIFTAAFLEKLGMNTSPA-WNAPRTDLIQSVQFDDKDRMIAFCQAIQYA 344 (431)
T ss_dssp HHHH---------HHHHHHHHHHHHHHHHHHHHHTCCEESC-TTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred hhhH---------HHHHHHHHHHHHHHHHHHHhCcCEecCC-CCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence 5543 6678889999999999999999887544 333 7888887766778899999987
No 224
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.90 E-value=2.9e-22 Score=214.35 Aligned_cols=299 Identities=15% Similarity=0.135 Sum_probs=214.4
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEeCccH-HHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC-------
Q 046230 144 TLMVHNELEECVARFVGKPAAIVFGMGY-VTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------- 215 (489)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~------- 215 (489)
....+.++++.+|+++|.+.++++++|+ .+|..++.+++++||.|+++.++|.|+..++.++|+.++.++..
T Consensus 193 ~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~ 272 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGIL 272 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCB
T ss_pred CcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEeccccccccc
Confidence 3556789999999999999999999995 77899999999999999999999999999999999999887642
Q ss_pred --------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccc-ccC
Q 046230 216 --------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGA-VGK 286 (489)
Q Consensus 216 --------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~-~g~ 286 (489)
|+++|++++++.. .+. ..+++|++.+ +++|.+.++++|.++|++++ |++||||+.+. +++
T Consensus 273 ~~i~~~~~d~e~Le~~l~~~~-----~~k--~p~~vivt~p--n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 273 GGIPQSEFQHATIAKRVKETP-----NAT--WPVHAVITNS--TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp CCCCGGGGSHHHHHHHHHHST-----TCC--SCSEEEEESS--CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSG
T ss_pred cCcccccCCHHHHHHHHhhCc-----Ccc--CceEEEEECC--CCCCccCCHHHHHHHhCcCc--EEEccccccccccCC
Confidence 7899999998631 010 1136677776 78999999999999999774 79999998553 343
Q ss_pred CCCccccccCCCCCCccEE---EcccccccCCc--ceEEEeCHHHH-HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHc
Q 046230 287 TGRGVCELLEVDTADVDIM---MGTFTKSFGSC--GGYIAGSKELI-QYLKYTCPAHLYATSISPPAAEQIISAIKVILG 360 (489)
Q Consensus 287 ~G~~~~~~~~v~p~~~Di~---~~t~sK~~g~~--GG~i~~~~~~~-~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~ 360 (489)
.+.+... .... .+.|++ ++|+||++++. ||++..+.++. +.+.. .....++++.+++.+|+..++++.+.+
T Consensus 342 ~~~~~~a-l~~g-~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~-~~~~~~STSpsy~~~AsldaA~~~~~~ 418 (715)
T 3n75_A 342 IYEGKCG-MSGG-RVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE-AYMMHTTTSPHYGIVASTETAAAMMKG 418 (715)
T ss_dssp GGTTSST-TSSS-CCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHH-HHHHTSCSSCCHHHHHHHHHHHHHHSH
T ss_pred ccccccc-cccC-cCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHH-HHHhhcCCCchHHHHHHHHHHHHHHHh
Confidence 3222111 1110 113554 89999999863 58887765422 22222 222345677999999999999998831
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhCC-------CeeeCCCC-----------------------C-----Ce-EEEE
Q 046230 361 EDGSSRGAQKLARIRENSNFFRSELQKMG-------FEVLGDND-----------------------S-----PV-MPIM 404 (489)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~v~~~~~-----------------------~-----~~-~~~~ 404 (489)
..++++++++.++.++|++.|++++ +.+..+.. . |. +.+.
T Consensus 419 ----~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~ 494 (715)
T 3n75_A 419 ----NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLL 494 (715)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEE
T ss_pred ----hccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEE
Confidence 1457789999999999999998762 33332110 0 10 1122
Q ss_pred eCC----------CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 405 LYN----------PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 405 ~~~----------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
... ......+.+.|.++||.+.- .+.+.+-+.++...|++++++++++|.++-+..
T Consensus 495 ~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~-------~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 495 TPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEK-------TGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp CSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSE-------EETTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccccCCCcHHHHHHHHHHCCCEEEe-------cCCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 211 23345788889888998762 233668888888999999999999998876543
No 225
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.90 E-value=3e-22 Score=203.17 Aligned_cols=286 Identities=12% Similarity=0.069 Sum_probs=197.3
Q ss_pred hhHHHHHHHHHHHhCCC--CEEEe--CccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH-HHHhc--CCeEEEecCCCHH
Q 046230 146 MVHNELEECVARFVGKP--AAIVF--GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVN-GARGS--GATIRVFQHNTPS 218 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~--~~i~~--~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~-~~~~~--g~~~~~~~~~d~~ 218 (489)
+...++++.+++++|.+ +.+++ ++|++++..++.++.++| ++++....|+.... .+... |+.++.++.++-.
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~ 156 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGS 156 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 45788999999999975 35555 566777788888888877 33335555643222 33444 6777766654110
Q ss_pred HHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCC
Q 046230 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD 298 (489)
Q Consensus 219 ~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~ 298 (489)
.....+ .++.+ +|++..+.+++|.+.++++|.++ +|+++|+||+|+.|.. . .++
T Consensus 157 ~~~~~i------------~~~~~-~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~--~-------~~~- 210 (398)
T 2fyf_A 157 APEPQT------------DPSVD-VIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL--P-------VDI- 210 (398)
T ss_dssp CCCCCC------------CTTCS-EEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS--C-------CCG-
T ss_pred CCCccc------------cCCCC-EEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCc--c-------cCc-
Confidence 000001 11234 45555788999999999988887 8999999999984421 1 112
Q ss_pred CCCccEEEcccccccCCcc--eEEEeCHHHHHHHHhhC--------------------CCcccccCCCHHHHHHHHHHHH
Q 046230 299 TADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTC--------------------PAHLYATSISPPAAEQIISAIK 356 (489)
Q Consensus 299 p~~~Di~~~t~sK~~g~~G--G~i~~~~~~~~~l~~~~--------------------~~~~~~~~~~p~~~aa~~a~L~ 356 (489)
.++|+++.|++|++|++| |++++++++++.++... ....+ .+.+...++++.++|+
T Consensus 211 -~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~a~~~al~ 288 (398)
T 2fyf_A 211 -AETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTY-NTPAIATLALLAEQID 288 (398)
T ss_dssp -GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCS-SCCCHHHHHHHHHHHH
T ss_pred -ccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCC-CCCCHHHHHHHHHHHH
Confidence 135899999999998874 88999999888774310 01112 2356667777788888
Q ss_pred HHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--C-CCCC-eEEEEeCCCCcHHHHHHHHhhCCceEEeecCC
Q 046230 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLG--D-NDSP-VMPIMLYNPAKIPAFSRECLRQNVAVVTVAFP 431 (489)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~--~-~~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p 431 (489)
.+... +..++.+++++++.+++.+.|+++ |+.+.. + ..++ ++++.+.......++.+.|.++||.+.+. +.
T Consensus 289 ~~~~~---g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g-~~ 364 (398)
T 2fyf_A 289 WLVGN---GGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEP-YR 364 (398)
T ss_dssp HHHHH---TSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSC-CT
T ss_pred HHHHc---cCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecC-cc
Confidence 76320 015778899999999999999998 887763 2 1345 77777755556788999999999998742 21
Q ss_pred CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 432 ATPLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
..+.+.+||++...+|++|+++++++|++++++
T Consensus 365 --~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 365 --KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp --TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred --cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 223578999998888999999999999998764
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.90 E-value=3.5e-22 Score=210.44 Aligned_cols=334 Identities=12% Similarity=0.094 Sum_probs=215.6
Q ss_pred eEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCCCcchhHHHHHHHHHHHh-------C----CCCEEEeCcc
Q 046230 102 CLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFV-------G----KPAAIVFGMG 170 (489)
Q Consensus 102 ~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-------g----~~~~i~~~sG 170 (489)
++||+.+. .+++ ++.+.+++.+++.. .. +....|. .++++.+++.+ + .++.|++++|
T Consensus 106 ~i~l~~g~-~~~~--~~~~~~al~~~~~~--~~---Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G 173 (546)
T 2zy4_A 106 SLSYVRDQ-LGLD--PAAFLHEMVDGILG--CN---YPVPPRM----LNISEKIVRQYIIREMGADAIPSESVNLFAVEG 173 (546)
T ss_dssp HHHHHHHT-SCCC--HHHHHHHHHHHHHT--CS---CCSSSSC----CHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEH
T ss_pred hhecccCC-CCCC--ChHHHHHHHHhhhc--CC---CCCCcCC----HHHHHHHHHHHHHHhccCCCCCCCcceEEEECC
Confidence 77886444 2343 46677777776642 11 1112234 34555544432 1 1367778777
Q ss_pred HHHH-HHhHhh-----hcCCCCEEEEcCCCchHHHHHHHhc--CCeEEEecCC-------CHHHHHHHHHHHHhcCCCCC
Q 046230 171 YVTN-SAILPV-----LMRKGSLIISDSLNHNSIVNGARGS--GATIRVFQHN-------TPSHLEEVLREQIAEGQPRT 235 (489)
Q Consensus 171 ~~a~-~~~~~a-----l~~~g~~Vl~~~~~h~~~~~~~~~~--g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~ 235 (489)
+... ..++.+ ++++||.|+++.|+|..+...+.+. |++++.++.+ |+++|++.+..
T Consensus 174 ~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------- 244 (546)
T 2zy4_A 174 GTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP--------- 244 (546)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST---------
T ss_pred HHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC---------
Confidence 6655 666655 5789999999999999998876654 5777777653 56666654421
Q ss_pred CCCCccEEEEEcCcCCCCCCCCC---hHHHHHHH--HHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccc
Q 046230 236 HRPWKKIMVIVEGIYSMEGELCK---FPEIIAIC--KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFT 310 (489)
Q Consensus 236 ~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~--~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~s 310 (489)
..+++++ .+.+|++|.+.+ +++|+++| +++|++||+||+|+ .+........+ ..+ +.+|+++|||
T Consensus 245 ---~~k~v~l-~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~--~~~~~~~s~~~---~~~-~~~i~~~S~S 314 (546)
T 2zy4_A 245 ---AIKIFFC-VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADDFQSLFA---ICP-ENTLLVYSFS 314 (546)
T ss_dssp ---TEEEEEE-ESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG--GGSTTCCCHHH---HCG-GGEEEEEEST
T ss_pred ---CCeEEEE-ECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch--hhcccCcCHHH---hCC-CCEEEEEeCc
Confidence 2344444 478999999876 67789998 88999999999999 66543322222 222 3479999999
Q ss_pred cccCCcc---eEEEeCHH-HHHHHHhhC-------------C---------------------CcccccCCCHHHHHHH-
Q 046230 311 KSFGSCG---GYIAGSKE-LIQYLKYTC-------------P---------------------AHLYATSISPPAAEQI- 351 (489)
Q Consensus 311 K~~g~~G---G~i~~~~~-~~~~l~~~~-------------~---------------------~~~~~~~~~p~~~aa~- 351 (489)
|.+|.+| ||++++++ +++.+.... . ....+.+.+.+.+.++
T Consensus 315 K~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a 394 (546)
T 2zy4_A 315 KYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMA 394 (546)
T ss_dssp TTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHH
T ss_pred cccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHH
Confidence 9999889 99998875 777763210 0 0011223555554442
Q ss_pred HHHH-HHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCC-----------------CCcHHH
Q 046230 352 ISAI-KVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYN-----------------PAKIPA 413 (489)
Q Consensus 352 ~a~L-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------~~~~~~ 413 (489)
+.++ ..+. ......+..++.++++.+.+.+.|. .++.+.++..++++++.+.. ......
T Consensus 395 ~~a~~all~--~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~ 471 (546)
T 2zy4_A 395 LFSLFALMD--EADEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDM 471 (546)
T ss_dssp HHHHHHHHC--TTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHH
Confidence 2122 2331 1233566777888888888888885 56555555667777776532 012234
Q ss_pred HHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccC
Q 046230 414 FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYF 472 (489)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~ 472 (489)
+.+.|.++||.+.|...... +.+++||++. ..+++++++++++|+++++++..++.
T Consensus 472 l~~ll~~~gV~v~pG~~F~~--~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~~~~ 527 (546)
T 2zy4_A 472 LFRIADETGIVLLPGRGFGS--NRPSGRASLA-NLNEYEYAAIGRALRKMADELYAEYS 527 (546)
T ss_dssp HHHHHHHHSCCCEESSCTTC--SSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCEEEeCccccCC--CCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788999998443322 4578999995 56899999999999999887765443
No 227
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.89 E-value=1.8e-22 Score=204.40 Aligned_cols=281 Identities=14% Similarity=0.101 Sum_probs=196.2
Q ss_pred HHHHHHHHHHhCC------C-CEEEeCccHHH-HHHhHhhhcCCCC----EEEEcCCCchHHHHHHHhcCCeEEEecCCC
Q 046230 149 NELEECVARFVGK------P-AAIVFGMGYVT-NSAILPVLMRKGS----LIISDSLNHNSIVNGARGSGATIRVFQHNT 216 (489)
Q Consensus 149 ~~l~~~la~~~g~------~-~~i~~~sG~~a-~~~~~~al~~~g~----~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d 216 (489)
.+|++.+|++++. + +.|++++|++. +..++.++.++|| .|+++.|+|..+...++..|++++.++.+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d- 149 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGD- 149 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEE-
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCC-
Confidence 8899999999872 3 57888877755 5888888899999 99999999999999999999888777653
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccC
Q 046230 217 PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLE 296 (489)
Q Consensus 217 ~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~ 296 (489)
.+.++ . ++.+ +|++.+.+|++|.+.+ +|++.++.+++++|+||+|.. +. .... .
T Consensus 150 ~~~l~----~-----------~~~k-~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~---~~-~~~l----~ 203 (391)
T 3bwn_A 150 AWGFD----K-----------KGPY-IELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYW---PH-YTPI----T 203 (391)
T ss_dssp STTCC----C-----------CSCE-EEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCS---TT-TSCC----C
T ss_pred HHHcC----C-----------CCCE-EEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCC---CC-CCcc----c
Confidence 22222 1 1234 4556778899998875 454422223399999999972 11 1111 1
Q ss_pred CCCCCccEEEcccccccCCcc---eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHcc-----CCCchH
Q 046230 297 VDTADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGE-----DGSSRG 367 (489)
Q Consensus 297 v~p~~~Di~~~t~sK~~g~~G---G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~-----~~~~~~ 367 (489)
. ..+.+|+++||||.+|.+| ||+++ ++++++.+........ .+.+++.+.++.++|+.-... ....+.
T Consensus 204 ~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 280 (391)
T 3bwn_A 204 R-RQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNS--IGVSKESQVRTAKILNVLKETCKSESESENFF 280 (391)
T ss_dssp C-CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHH
T ss_pred c-CCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccc--cCCCHHHHHHHHHHHhCcchhccccccHHHHH
Confidence 1 2345899999999999889 99987 8899988876543222 347888888888887642100 012357
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeeeCC-------------CCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCc
Q 046230 368 AQKLARIRENSNFFRSELQKM-GFEVLGD-------------NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPAT 433 (489)
Q Consensus 368 ~~~~~~~~~~~~~l~~~L~~~-g~~v~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~ 433 (489)
++.++.++++.+++.+.|+++ ++.+..+ ..+.++++.+... ..+.+.|.++||.+.+...+.
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---~~~~~~l~~~gV~v~pg~~fg- 356 (391)
T 3bwn_A 281 KYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---TDLVSELRRHKVMSRAGERCG- 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---CCHHHHHHHTTEECEEGGGGT-
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---HHHHHHHHHCCEEEccCCCCC-
Confidence 788999999999999999988 5555332 2334566666532 245666778899999843322
Q ss_pred CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 046230 434 PLLLARARICISASHTKEDLIKALEVISRVGDL 466 (489)
Q Consensus 434 ~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (489)
.+.+++||+++ .+++++++++++|.+++++
T Consensus 357 -~~~~~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 357 -SDKKHVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp -CCTTEEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred -CCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 14578999995 4899999999999877543
No 228
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.87 E-value=1.6e-21 Score=199.73 Aligned_cols=325 Identities=13% Similarity=0.078 Sum_probs=217.2
Q ss_pred cceeEecccccccCCCCCCccchHHHHHHHHHhCCCCCCcccCC-CcchhHHHHHHHHHHHhC-------CCCEEEeCcc
Q 046230 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDG-GTLMVHNELEECVARFVG-------KPAAIVFGMG 170 (489)
Q Consensus 99 g~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g-------~~~~i~~~sG 170 (489)
.+..|||+.+.. .++ .++.+.+++.+.+.+.+....++.... | .....+|++.+|++++ .++.+++++|
T Consensus 55 ~~~~i~l~~g~~-~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G 131 (427)
T 2hox_A 55 QGCSADVASGDG-LFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFGVG 131 (427)
T ss_dssp TTCCEECCSCCC-GGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESH
T ss_pred CCceEEecCcCC-CCC-CCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCC
Confidence 445788864332 122 124556666655533232211111111 3 1224889999999985 2466777666
Q ss_pred HH-HHHHhHhhh--------cCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q 046230 171 YV-TNSAILPVL--------MRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
Q Consensus 171 ~~-a~~~~~~al--------~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~ 241 (489)
+. ++..++.++ .++||.|+++.|+|..+...++..|++++.+.. |+++|++.+.. +.+
T Consensus 132 ~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~~~~~~------------~~k 198 (427)
T 2hox_A 132 VTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAG-NAANYVNVSNP------------EQY 198 (427)
T ss_dssp HHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEE-EGGGGTTCSCG------------GGE
T ss_pred HHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecC-CHHHHHHhhcC------------Cce
Confidence 54 558888888 899999999999999999999999988766543 67777765543 234
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc---e
Q 046230 242 IMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---G 318 (489)
Q Consensus 242 ~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G---G 318 (489)
+|++.+.++++|.+.+ + +++ ++..+.|+++- . . ... ...+. .+.||+++||||.+|.+| |
T Consensus 199 -~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~--~--~-~~s---~~~~~-~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 199 -IEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYY--W--P-HYT---PIKYK-ADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp -EEEEESSCTTTCCCCC-C----SST--TCEEEEECTTC--S--T-TTS---CCCSC-BCCSEEEEEHHHHTSCGGGCCE
T ss_pred -EEEEcCCCCCcccccH-H----HHc--CCCEEEeeccc--C--C-CCC---ccccC-CCceEEEEeChhcCCCCCceEE
Confidence 4555578899999888 4 233 56788888864 1 1 111 12222 345899999999999888 9
Q ss_pred EEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHcc------CCCchHHHHHHHHHHHHHHHHHHHHhC-CC
Q 046230 319 YIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGE------DGSSRGAQKLARIRENSNFFRSELQKM-GF 390 (489)
Q Consensus 319 ~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 390 (489)
|+++ ++++++.+........ .+.+++.+.++.++|+..... ......++.+++++++.+++.+.|+++ |+
T Consensus 262 ~~~~~~~~l~~~l~~~~~~~~--~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 339 (427)
T 2hox_A 262 WALIKDESVYNNLLNYMTKNT--EGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRF 339 (427)
T ss_dssp EEEECCHHHHHHHHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSE
T ss_pred EEEECCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCc
Confidence 9999 5899988876543222 237777777777777642100 012245667888999999999999988 66
Q ss_pred ee--e------------CCCCCCeEEEEeCCCCcHHHHHHHHh-hCCceEEee-cCCCcCCCCCeEEEeecCCCCHHHHH
Q 046230 391 EV--L------------GDNDSPVMPIMLYNPAKIPAFSRECL-RQNVAVVTV-AFPATPLLLARARICISASHTKEDLI 454 (489)
Q Consensus 391 ~v--~------------~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~-~~p~~~~~~~~iRi~~~~~~t~edid 454 (489)
.+ . .+.++.++++.+.. ...++++.|+ ++||.+.+. .|+. +.+++|+++. .++++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~---~~~~~Ris~~--~~~e~l~ 412 (427)
T 2hox_A 340 SYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEA---SSRYVRLSLI--KTQDDFD 412 (427)
T ss_dssp ECCCCCSCEEETTTTEEECCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTS---CTTEEEEECS--SCHHHHH
T ss_pred cccccccccccccccccCCCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCC---CCCEEEEEec--CCHHHHH
Confidence 54 1 22346777777753 3345777776 789999983 3332 4689999995 4899999
Q ss_pred HHHHHHHHHHH
Q 046230 455 KALEVISRVGD 465 (489)
Q Consensus 455 ~~l~~l~~~~~ 465 (489)
+++++|.++++
T Consensus 413 ~~l~~l~~~~~ 423 (427)
T 2hox_A 413 QLMYYLKDMVK 423 (427)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 229
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.86 E-value=8.2e-20 Score=187.69 Aligned_cols=289 Identities=17% Similarity=0.109 Sum_probs=186.5
Q ss_pred CCCcchhHHHHHHHHHHHhCCCCE-EEeCcc-HHHHHHhHhh-hcCCCCEEEEcCCCchHHHHHHH----hcCCeEEEec
Q 046230 141 DGGTLMVHNELEECVARFVGKPAA-IVFGMG-YVTNSAILPV-LMRKGSLIISDSLNHNSIVNGAR----GSGATIRVFQ 213 (489)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~~~-i~~~sG-~~a~~~~~~a-l~~~g~~Vl~~~~~h~~~~~~~~----~~g~~~~~~~ 213 (489)
..|..+...++++.+++++|.+.. +++++| +.++.++..+ ..++|+.|+++.+.|+++...++ ..|++++.++
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~ 182 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLP 182 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEc
Confidence 345667789999999999998643 344444 4333333333 34789999999999999886653 4799998887
Q ss_pred CCC-HHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc-cccccccCCCCcc
Q 046230 214 HNT-PSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEA-HSIGAVGKTGRGV 291 (489)
Q Consensus 214 ~~d-~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa-~s~g~~g~~G~~~ 291 (489)
.++ .-++++ +. .++.+|++..+ +++|.+.++++|.++|+++|+++|+|-. +++|.+...
T Consensus 183 ~~~~~~d~~~-i~-------------~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~---- 243 (438)
T 1wyu_A 183 LEGGRTPLPE-VG-------------EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP---- 243 (438)
T ss_dssp CBTTBCCCCC-CC-------------TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH----
T ss_pred CcCCccCHHH-hC-------------CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC----
Confidence 431 111221 21 13445555556 8999999999999999999999997743 554444222
Q ss_pred ccccCCCCCCccEEEcccccc------cCCcc-eEEEeCHHHHHHHHhhCC----------Ccc-------------ccc
Q 046230 292 CELLEVDTADVDIMMGTFTKS------FGSCG-GYIAGSKELIQYLKYTCP----------AHL-------------YAT 341 (489)
Q Consensus 292 ~~~~~v~p~~~Di~~~t~sK~------~g~~G-G~i~~~~~~~~~l~~~~~----------~~~-------------~~~ 341 (489)
..++ .|++++| +|. ++++| |++++++++++.+..... .+. .++
T Consensus 244 -~~~g-----~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t 316 (438)
T 1wyu_A 244 -GAYG-----ADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAK 316 (438)
T ss_dssp -HHHT-----CSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSS
T ss_pred -ccCC-----CCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhccc
Confidence 1122 3888877 564 43445 999999887765421100 000 011
Q ss_pred -CC---CHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCeEEEEeCCCCcHHHHHH
Q 046230 342 -SI---SPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSR 416 (489)
Q Consensus 342 -~~---~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 416 (489)
.. +...+.++...+..+. ....++..++..++.+++.+.|+++ |+.+..+.. .+..+.+..+....++.+
T Consensus 317 ~~~~~~~~~~a~~aa~~l~~~~----~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 391 (438)
T 1wyu_A 317 SNITTNAQLTALMGAMYLAALG----PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP-FFNEFALALPKDPEAVRR 391 (438)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS-BCSEEEEECSSCHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC-eEEEEEEeCCCCHHHHHH
Confidence 11 2222222222244431 1135677888999999999999998 998876421 111122222346788999
Q ss_pred HHhhCCceE--EeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 417 ECLRQNVAV--VTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 417 ~l~~~Gi~v--~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
+|.++||.+ .+..+. ..+.+|+++...+|++|+++++++|++++
T Consensus 392 ~L~~~gi~v~~~~~~~~----~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 392 ALAERGFHGATPVPREY----GENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHTTCCCCEECCTTS----CSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHCCceecccccccc----CCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 999999998 432211 15789999988899999999999998763
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.85 E-value=2.7e-19 Score=181.82 Aligned_cols=288 Identities=12% Similarity=0.076 Sum_probs=184.1
Q ss_pred HHHHHHHHHHh-CCC----C--EEEeCccHHHH----HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCe-EEEecCC-
Q 046230 149 NELEECVARFV-GKP----A--AIVFGMGYVTN----SAILPVLMRKGSLIISDSLNHNSIVNGARGSGAT-IRVFQHN- 215 (489)
Q Consensus 149 ~~l~~~la~~~-g~~----~--~i~~~sG~~a~----~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~-~~~~~~~- 215 (489)
.+|++.+++++ |.. . .+...+|+.+. ..+.+++.++||.|++++|+|+.+...++..|.. +..++..
T Consensus 90 p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~ 169 (420)
T 4h51_A 90 QPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYD 169 (420)
T ss_dssp HHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEE
T ss_pred HHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccc
Confidence 78888888875 321 1 22235566665 2334456689999999999999999999999986 4444332
Q ss_pred ------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccccccC
Q 046230 216 ------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK---FPEIIAICKKYKAYIYLDEAHSIGAVGK 286 (489)
Q Consensus 216 ------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~---l~~i~~l~~~~~~~li~DEa~s~g~~g~ 286 (489)
|.+.+.+.+... +.+..+++....+|++|.... +++|.++|+++++++|+||+|. +|..
T Consensus 170 ~~~~~~d~~~~~~~l~~~----------~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~--~~~~ 237 (420)
T 4h51_A 170 PKTVSLNFEGMKKDILAA----------PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ--GYAS 237 (420)
T ss_dssp GGGTEECHHHHHHHHHHS----------CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT--TTTT
T ss_pred ccccCCCHHHHHHHHhcc----------CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh--hhcc
Confidence 667777766652 235667777888999998855 8899999999999999999999 7765
Q ss_pred CCCc--ccc-ccCCCCCCccEEEcccccccCCcc---eEEEeCHHHHHH-------HHhhCCCcccccCCCHHHHHHHHH
Q 046230 287 TGRG--VCE-LLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQY-------LKYTCPAHLYATSISPPAAEQIIS 353 (489)
Q Consensus 287 ~G~~--~~~-~~~v~p~~~Di~~~t~sK~~g~~G---G~i~~~~~~~~~-------l~~~~~~~~~~~~~~p~~~aa~~a 353 (489)
.+.. ... ....+..+.-+++.||||.|+.+| ||+++..+..+. +...... .++ +.+...+.++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~-~~s-~~p~~~a~~~~~ 315 (420)
T 4h51_A 238 GSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIRE-EYT-CPPAHGARLAHL 315 (420)
T ss_dssp SCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHT-TTS-SCCHHHHHHHHH
T ss_pred CCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhc-ccC-cchHHHHHHHHH
Confidence 4421 110 001111222588899999999999 998775433322 2111111 111 123333333333
Q ss_pred HHHH--HHccCCCchHHHHHHHHHHHHHHHHHHHHhCCC----eeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEe
Q 046230 354 AIKV--ILGEDGSSRGAQKLARIRENSNFFRSELQKMGF----EVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT 427 (489)
Q Consensus 354 ~L~~--i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~----~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 427 (489)
.|.- +.. ....+.+..+++++++++.+.+.|+++|. ..+.+..|.+.+ ++ .. .+.++.|.++||++++
T Consensus 316 ~l~d~~l~~-~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~--~g--ls-~e~v~~L~e~~Vy~~~ 389 (420)
T 4h51_A 316 ILSNNELRK-EWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSF--LG--LS-KAQCEYCQNHNIFITV 389 (420)
T ss_dssp HHHSHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEE--CC--CC-HHHHHHHHHTTEECCT
T ss_pred HhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEe--cC--cC-HHHHHHHHhCCEEEcC
Confidence 3320 000 00114456778888999999999999863 233444565432 22 22 3456788889998872
Q ss_pred ecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 428 ~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
. .||+++ ..++++|++++++|.++++++.
T Consensus 390 -------~----gRis~A-gl~~~ni~~~a~aI~~vvr~i~ 418 (420)
T 4h51_A 390 -------S----GRANMA-GLTHETALMLAQTINDAVRNVN 418 (420)
T ss_dssp -------T----CEEEGG-GCCHHHHHHHHHHHHHHHC---
T ss_pred -------C----CEEEec-cCCHHHHHHHHHHHHHHHHHhh
Confidence 1 299985 6899999999999999998765
No 231
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=187.37 Aligned_cols=328 Identities=17% Similarity=0.134 Sum_probs=212.4
Q ss_pred EecccccccCCCCCCccchHHHHHHHHHhC-CCCCC---cccCCCcchhHHHHHHHHHHHhCCC--CEEEe--CccHHHH
Q 046230 103 LNLGSYNYLGFAASDEYCTPRVIESLKKYS-PSTCS---SRVDGGTLMVHNELEECVARFVGKP--AAIVF--GMGYVTN 174 (489)
Q Consensus 103 id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~--~sG~~a~ 174 (489)
+|++.-|......-|++|.+++.+.+.++. .+.+. +....-..+..++.++.++++++.+ ..++| ++||+++
T Consensus 11 ~~~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~ 90 (377)
T 3e77_A 11 VDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQF 90 (377)
T ss_dssp ----CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred cCcccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHH
Confidence 455555556666668899999998887643 22111 1111113566788999999999975 34555 4678888
Q ss_pred HHhHhhhcCC--CCEEEEcCCCchHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHHHHhcCCCCCCCCCccEEEE
Q 046230 175 SAILPVLMRK--GSLIISDSLNHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIMVI 245 (489)
Q Consensus 175 ~~~~~al~~~--g~~Vl~~~~~h~~~~--~~~~~~g~~~~~~~~~-----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vi 245 (489)
.+++..+..+ ||.|+.-...|.+.. ..++..|..++.++.+ ++++++..++ ++.+ +|.
T Consensus 91 n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~------------~~t~-lV~ 157 (377)
T 3e77_A 91 SAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN------------PDAS-YVY 157 (377)
T ss_dssp HHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC------------TTCS-CEE
T ss_pred HHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC------------CCcc-EEE
Confidence 7777777654 787765555554432 2234446666555543 3444433222 1233 344
Q ss_pred EcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCH
Q 046230 246 VEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSK 324 (489)
Q Consensus 246 ve~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~ 324 (489)
+-..-+.+|.+.|+ +|+++|+++++|.++++|.. ..++ .+.|++..|-.|++|++| |+++.++
T Consensus 158 ~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~---------~id~--~~~~~~~~s~~K~~gp~G~g~l~~~~ 221 (377)
T 3e77_A 158 YCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSK---------PVDV--SKFGVIFAGAQKNVGSAGVTVVIVRD 221 (377)
T ss_dssp EESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSS---------CCCG--GGCSEEEEEGGGTTSCTTCEEEEEET
T ss_pred EeCccCchheEchh-----hhccCCCEEEEEcccccCCC---------CCch--hhcCEEEEecccccCCCccEEEEEcH
Confidence 44555567999998 47899999999999997743 2333 334677789999999989 8888877
Q ss_pred HHHHHHHhh-----------CCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 046230 325 ELIQYLKYT-----------CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV 392 (489)
Q Consensus 325 ~~~~~l~~~-----------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~v 392 (489)
++++.+... .....+ .+.|.....+..++|+++.. ....++..++.+++.+++++.|+++ |+.+
T Consensus 222 ~~l~~~~~~~p~~~~~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~---~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~ 297 (377)
T 3e77_A 222 DLLGFALRECPSVLEYKVQAGNSSLY-NTPPCFSIYVMGLVLEWIKN---NGGAAAMEKLSSIKSQTIYEIIDNSQGFYV 297 (377)
T ss_dssp TSCSCCCTTSCGGGCHHHHHTTTTCS-SCCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred HHHhhccCCCCchhhHHHHhhcCCCC-CCchHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 654322211 111112 23566677788889998853 1135788899999999999999998 7775
Q ss_pred eCC---CCCC-eEEEEeCCCC---cH-HHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 046230 393 LGD---NDSP-VMPIMLYNPA---KI-PAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVG 464 (489)
Q Consensus 393 ~~~---~~~~-~~~~~~~~~~---~~-~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (489)
... .+++ ++.+.+.... .. ..+.+.|.++||.+.+ +.. ..+.+|+++...+|++|||+++++|+++.
T Consensus 298 ~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~-g~~----~~g~iRiS~~~~~t~edId~l~~al~~~~ 372 (377)
T 3e77_A 298 CPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLK-GHR----SVGGIRASLYNAVTIEDVQKLAAFMKKFL 372 (377)
T ss_dssp CCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCB-CCT----TTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeC-CCC----cCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 321 2344 4777776421 11 4677888889998863 221 12459999999999999999999999998
Q ss_pred HHhC
Q 046230 465 DLVG 468 (489)
Q Consensus 465 ~~~~ 468 (489)
++-+
T Consensus 373 ~~~~ 376 (377)
T 3e77_A 373 EMHQ 376 (377)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 7643
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.82 E-value=1.5e-18 Score=172.72 Aligned_cols=320 Identities=13% Similarity=0.114 Sum_probs=208.8
Q ss_pred ceeEecccccccCCCCCCccchHHHHHHHHHhC-CCCCCc---ccCCCcchhHHHHHHHHHHHhCCC--CEEEe--CccH
Q 046230 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKYS-PSTCSS---RVDGGTLMVHNELEECVARFVGKP--AAIVF--GMGY 171 (489)
Q Consensus 100 ~~~id~~s~~~lg~~~~~~~v~~a~~~~l~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~--~~i~~--~sG~ 171 (489)
++.++|+ -|-..-+++|.+++.+.+.++. .+.+.. ....-..+..++.++.++++++.+ ..++| ++||
T Consensus 4 ~~~~~f~----pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T 79 (361)
T 3m5u_A 4 MRKINFS----AGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGAS 79 (361)
T ss_dssp CCCEECC----SSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHH
T ss_pred cceEeec----CCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHH
Confidence 4566776 5555557888888888776542 221110 001112467788999999999974 35555 5667
Q ss_pred HHHHHhHhhhcCCCCEE-EEcCCCchH-HHHHHHhcCCeEEEecCC-------CHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 172 VTNSAILPVLMRKGSLI-ISDSLNHNS-IVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 172 ~a~~~~~~al~~~g~~V-l~~~~~h~~-~~~~~~~~g~~~~~~~~~-------d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+++.+++..+. +++.+ .+....|.. ....++..|+++..++.+ +++. + |++ +.+
T Consensus 80 ~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~------------~t~- 142 (361)
T 3m5u_A 80 LQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD------------NAD- 142 (361)
T ss_dssp HHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT------------TSS-
T ss_pred HHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC------------CCC-
Confidence 77777777766 66632 222223322 223345567877776543 2233 2 321 334
Q ss_pred EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEE
Q 046230 243 MVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIA 321 (489)
Q Consensus 243 ~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~ 321 (489)
+|.+....+.+|.+.|. +++ +|+++++|.++++|.. ..++ .++|+++.|-+|++|++| |+++
T Consensus 143 lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~---------~id~--~~~d~~~~s~~K~~gp~G~g~l~ 205 (361)
T 3m5u_A 143 YAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR---------KVDF--SNIALFYGGVQKNAGISGLSCIF 205 (361)
T ss_dssp EEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS---------CCCC--TTEEEEEEETTTTSSCTTCEEEE
T ss_pred EEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC---------CCCc--ccCCEEEEechhccCCCccEEEE
Confidence 44444555556887552 344 4999999999997743 2333 457999999999999989 9999
Q ss_pred eCHHHHHHHHh-hCC-----------CcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 046230 322 GSKELIQYLKY-TCP-----------AHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMG 389 (489)
Q Consensus 322 ~~~~~~~~l~~-~~~-----------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (489)
.++++.+.+.. ... ...+ .+.|.....+..++|+++.. ....++..++.+++.+++++.|++++
T Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~---~gG~~~i~~~~~~l~~~l~~~L~~~~ 281 (361)
T 3m5u_A 206 IRKDMLERSKNKQIPSMLNYLTHAENQSLF-NTPPTFAIYMFNLEMDWLLN---QGGLDKVHEKNSQKATMLYECIDLSN 281 (361)
T ss_dssp EEHHHHHHHHTCCCCGGGCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHHTST
T ss_pred EcHHHHhhhcCCCCCceeehHHHhhcCCCC-CCccHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998877654 111 1111 23566777788889998853 11367888999999999999999996
Q ss_pred -C-eeeCC--CCC-CeEEEEeCC-CCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 046230 390 -F-EVLGD--NDS-PVMPIMLYN-PAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463 (489)
Q Consensus 390 -~-~v~~~--~~~-~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (489)
+ ....+ ..+ .++.+.+.. .....++...|.++||.+... ... .+.+|+++...+|++|||+++++|+++
T Consensus 282 g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g-~~~----~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 282 GFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKG-HRI----LGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp TSEEESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTTEECCBC-CTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CeeeccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCCCEEecC-CCc----cCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 5 44332 223 467777765 222257888888999997632 111 145999999899999999999999998
Q ss_pred HHH
Q 046230 464 GDL 466 (489)
Q Consensus 464 ~~~ 466 (489)
.++
T Consensus 357 ~~~ 359 (361)
T 3m5u_A 357 QGK 359 (361)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 233
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.80 E-value=6.8e-19 Score=176.85 Aligned_cols=317 Identities=13% Similarity=0.086 Sum_probs=197.2
Q ss_pred CCCCCCccchHHHHHHHHHhC-CCCCC---cccCCCcchhHHHHHHHHHHHhCCC--CEEEe--CccHHHHHHhHhhhcC
Q 046230 112 GFAASDEYCTPRVIESLKKYS-PSTCS---SRVDGGTLMVHNELEECVARFVGKP--AAIVF--GMGYVTNSAILPVLMR 183 (489)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~--~sG~~a~~~~~~al~~ 183 (489)
|-..-+++|.+++.+.+.++. .+.+. +....-..+..++.++.++++++.+ ..++| ++||+++..++..+..
T Consensus 34 gpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~ 113 (386)
T 3qm2_A 34 GPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLG 113 (386)
T ss_dssp SSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccC
Confidence 333346788888887776532 22110 0111112456789999999999975 34555 5788888888888888
Q ss_pred CCCEEEEcCCCchHH--HHHHHhcCCeEEEecCC--------CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 184 KGSLIISDSLNHNSI--VNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 184 ~g~~Vl~~~~~h~~~--~~~~~~~g~~~~~~~~~--------d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
+|+.|+.-...|.+. ...++..| .+..++.+ ++++++..++. ++.+|.+....+.+
T Consensus 114 ~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~-------------~t~lV~~~h~et~t 179 (386)
T 3qm2_A 114 DKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSD-------------NAAYLHYCPNETID 179 (386)
T ss_dssp TCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCT-------------TCSCEEECSEETTT
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCC-------------CCcEEEEECCcCCc
Confidence 888765333333332 22334456 66666543 34455443322 23345555666667
Q ss_pred CCC-CChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccccCCcc-eEEEeCHHHHHHHH
Q 046230 254 GEL-CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLK 331 (489)
Q Consensus 254 G~~-~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~~g~~G-G~i~~~~~~~~~l~ 331 (489)
|.+ .|+++|. +|+++++|.++++|.+ ..++ ++.|+++.|-.|++|++| |+++.++++.+.+.
T Consensus 180 G~~i~pi~~i~-----~g~~~~vDa~qs~g~~---------pidv--~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~ 243 (386)
T 3qm2_A 180 GIAIDETPDFG-----PEVVVTADFSSTILSA---------PLDV--SRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAH 243 (386)
T ss_dssp TEECCCCCCCC-----TTCCEEEECTTTTTSS---------CCCG--GGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCC
T ss_pred CEecCchhhhc-----CCCEEEEEcccccCCC---------CCCc--cccCEEEEecccccCCCccEEEEECHHHHhhhc
Confidence 985 8899885 8999999999997743 2333 333566679999999989 99988877643222
Q ss_pred hhC-----------CCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeee-CC--CC
Q 046230 332 YTC-----------PAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVL-GD--ND 397 (489)
Q Consensus 332 ~~~-----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~v~-~~--~~ 397 (489)
... ....++ +.|....++..++|+.+... +..++..++.+++.+++++.|+++++... .+ .+
T Consensus 244 ~~~p~~~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~---gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~r 319 (386)
T 3qm2_A 244 ESCPSILDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQ---GGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANR 319 (386)
T ss_dssp TTSCGGGCHHHHHHC--------CCSHHHHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGB
T ss_pred ccCCcHHHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHc
Confidence 111 111122 24445666777888877420 02577888999999999999999876321 11 23
Q ss_pred C-CeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 046230 398 S-PVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467 (489)
Q Consensus 398 ~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (489)
+ .++.+.+........+...|.++||.+.. +... .+.+|+++...+|++|||+++++|+++.++-
T Consensus 320 s~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~-g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 320 SRMNVPFQLADNTLDKVFLEESFAAGLHALK-GHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp CSSEEEEEESSGGGHHHHHHHHHHTTEECCB-CCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCccccHHHHHHHHHCCCEEeC-CCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 36777776432236778888889998763 2111 1359999998999999999999999987653
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.78 E-value=4.1e-17 Score=162.04 Aligned_cols=335 Identities=17% Similarity=0.195 Sum_probs=205.5
Q ss_pred ceeEec-ccccccCCCCCCccchHHHHHHHHH-hCCCCCCcccCCCcchhHHHHH----HHHHHHhCCCC-----EEEeC
Q 046230 100 NRCLNL-GSYNYLGFAASDEYCTPRVIESLKK-YSPSTCSSRVDGGTLMVHNELE----ECVARFVGKPA-----AIVFG 168 (489)
Q Consensus 100 ~~~id~-~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~ 168 (489)
++.|++ .|-|+. .|.|.+++--.+.+ |..+..+.|...|. +...++| ++..++++.+. .+-.-
T Consensus 54 ~~~ieLIASEN~~-----S~aV~~a~gS~ltnKYaEGyPg~RyYgGc-e~vD~iE~la~~rak~lF~a~~A~w~VNVQP~ 127 (490)
T 3ou5_A 54 CRGLELIASENFC-----SRAALEALGSCLNNKYSEGYPGKRYYGGA-EVVDEIELLCQRRALEAFDLDPAQWGVNVQPY 127 (490)
T ss_dssp HHSEECCTTCCCC-----CHHHHHHHTSGGGTCCCCC-----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred HcCceEecCCCcC-----CHHHHHHhcCcccccccCCCCCccccCCC-hHHHHHHHHHHHHHHHHhCCCccccCCCCCcC
Confidence 345666 333432 34555555554443 66666666655444 3333333 44556788774 35568
Q ss_pred ccHHHHHHhHhhhcCCCCEEEEcCCCchHHHH-H-------HHhcCCe--EEEecCC------CHHHHHHHHHHHHhcCC
Q 046230 169 MGYVTNSAILPVLMRKGSLIISDSLNHNSIVN-G-------ARGSGAT--IRVFQHN------TPSHLEEVLREQIAEGQ 232 (489)
Q Consensus 169 sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~-~-------~~~~g~~--~~~~~~~------d~~~Le~~l~~~~~~g~ 232 (489)
||+.||.++..++++|||.|+.-...|+.... + ...+|.- ...++.+ |.+.++++.++.
T Consensus 128 SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~----- 202 (490)
T 3ou5_A 128 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF----- 202 (490)
T ss_dssp SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhc-----
Confidence 99999999999999999999987777665432 1 1222221 2222222 899999998885
Q ss_pred CCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCccccccCCCCCCccEEEcccccc
Q 046230 233 PRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKS 312 (489)
Q Consensus 233 ~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~~~~~~~v~p~~~Di~~~t~sK~ 312 (489)
+.+.+|+-.+.|+ ...++++++++|++.|++|++|-+|-.|.+ ..|.. ...+ ...|++++|.+|+
T Consensus 203 ------kPklIi~G~SaY~---r~id~~~~reIAd~vGA~Lm~DmAHiaGLV-A~g~~-psP~----~~ADvVTtTTHKT 267 (490)
T 3ou5_A 203 ------RPRLIIAGTSAYA---RLIDYARMREVCDEVKAHLLADMAHISGLV-AAKVI-PSPF----KHADIVTTTTHKT 267 (490)
T ss_dssp ------CCSEEEECCSSCC---SCCCHHHHHHHHHHHTCEEEEECGGGHHHH-HTTSS-CCGG----GTCSEEEEESSST
T ss_pred ------CCCeEEECCccCc---cccCHHHHHHHHhhcccEEEechhhhhhhh-ccccc-CCcc----ccceEEecccccc
Confidence 3444443334443 357899999999999999999999986543 22221 1122 1249999999999
Q ss_pred c-CCcceEEEeCH---------------HHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHH
Q 046230 313 F-GSCGGYIAGSK---------------ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRE 376 (489)
Q Consensus 313 ~-g~~GG~i~~~~---------------~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (489)
| |+.||.|.+++ ++.+.+...-.+..-+.+..-..++.+.+..+.+ ..+..+..+++.+
T Consensus 268 LrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~-----~p~fk~Ya~qVv~ 342 (490)
T 3ou5_A 268 LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQAC-----TPMFREYSLQVLK 342 (490)
T ss_dssp TCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH-----SHHHHHHHHHHHH
T ss_pred ccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHH-----hHhHHHHHHHHHH
Confidence 9 66689998765 4555555433332222222223333344333433 2367889999999
Q ss_pred HHHHHHHHHHhCCCeee-CCCCCCeEEEEeCCC-CcHHHHHHHHhhCCceEEeecCCC--cCCCCCeEEEeecC----CC
Q 046230 377 NSNFFRSELQKMGFEVL-GDNDSPVMPIMLYNP-AKIPAFSRECLRQNVAVVTVAFPA--TPLLLARARICISA----SH 448 (489)
Q Consensus 377 ~~~~l~~~L~~~g~~v~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~p~--~~~~~~~iRi~~~~----~~ 448 (489)
|++.|.+.|.+.|+.++ +..+++++.+.+... ....+..+.|.+.||.+.-..-|. .|...+.|||..++ ..
T Consensus 343 NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~ 422 (490)
T 3ou5_A 343 NARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQF 422 (490)
T ss_dssp HHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTC
T ss_pred HHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCC
Confidence 99999999999999986 445677777776443 345667777777899998644343 24445789998764 36
Q ss_pred CHHHHHHHHHHHHHHHH
Q 046230 449 TKEDLIKALEVISRVGD 465 (489)
Q Consensus 449 t~edid~~l~~l~~~~~ 465 (489)
.++|++++.+.|.+++.
T Consensus 423 ~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 423 REDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 78999999999988875
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.73 E-value=6e-16 Score=154.44 Aligned_cols=294 Identities=15% Similarity=0.177 Sum_probs=187.0
Q ss_pred hCCCC--EEEeCccHH-HHHHhHhhhcCC----CCEEEEcCCCchHHHHHHHhcCCeEEEecCC--------CHHHHHHH
Q 046230 159 VGKPA--AIVFGMGYV-TNSAILPVLMRK----GSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEV 223 (489)
Q Consensus 159 ~g~~~--~i~~~sG~~-a~~~~~~al~~~----g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~Le~~ 223 (489)
+|.+. ..++.+|++ .+.+++.+.+++ ++.|++++..|.|...++.+.|+.++.++.. |++++|++
T Consensus 129 ~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~a 208 (501)
T 3hl2_A 129 AGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAK 208 (501)
T ss_dssp TTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHH
T ss_pred cCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHH
Confidence 36553 355555554 565555555543 4899999999999999999999998887541 89999999
Q ss_pred HHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc-cccccCCCCCCc
Q 046230 224 LREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVDTADV 302 (489)
Q Consensus 224 l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~-~~~~~~v~p~~~ 302 (489)
|+++. +..+++|++.+.+...+.+.++++|.++|++||+++++||||+ +.-..... ..+.+... ..
T Consensus 209 I~e~g---------a~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhG--ah~~~~~~lp~sA~~~G--rA 275 (501)
T 3hl2_A 209 VQELG---------PDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG--VQSSKCMHLIQQGARVG--RI 275 (501)
T ss_dssp HHHHC---------GGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTC--TTCHHHHHHHHHHHHHS--CC
T ss_pred HHhcC---------CCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcch--hhhhhhhhhHHHHHhcC--CC
Confidence 98851 1345555555544434567899999999999999999999998 32111110 11112221 24
Q ss_pred cEEEcccccccC-CcceEEE-e-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHH
Q 046230 303 DIMMGTFTKSFG-SCGGYIA-G-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSN 379 (489)
Q Consensus 303 Di~~~t~sK~~g-~~GG~i~-~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~ 379 (489)
|+++-|.+|.+- +.||.++ . ++++++.+...-.+ ..+.+| + +..+.+|..+ +.+...+++++..++.+
T Consensus 276 D~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yPG---r~S~Sp-s-ldl~~tLL~l----Gr~Gy~~ll~e~~ela~ 346 (501)
T 3hl2_A 276 DAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPG---RASASP-S-LDVLITLLSL----GSNGYKKLLKERKEMFS 346 (501)
T ss_dssp CEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSCS---CBCSHH-H-HHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred cEEEecccccceeecCceEEEeCCHHHHHHHHHhCCC---CCCCcH-H-HHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 899999999984 3355444 3 56777776432221 112333 2 2233333333 22256788899999999
Q ss_pred HHHHHHHhC----CCeeeCCCCCCeEE-EEeCC-----CCcHHHHHHHHhhCCce---EEeec------------CCCc-
Q 046230 380 FFRSELQKM----GFEVLGDNDSPVMP-IMLYN-----PAKIPAFSRECLRQNVA---VVTVA------------FPAT- 433 (489)
Q Consensus 380 ~l~~~L~~~----g~~v~~~~~~~~~~-~~~~~-----~~~~~~~~~~l~~~Gi~---v~~~~------------~p~~- 433 (489)
+|++.|+++ |-++......++-. +-+.. ......+...|..++|. +++.+ |..-
T Consensus 347 ~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~ 426 (501)
T 3hl2_A 347 YLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHT 426 (501)
T ss_dssp HHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTS
T ss_pred HHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCC
Confidence 999999986 55666555555432 22221 12356788889988654 43311 1110
Q ss_pred -CCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCCC
Q 046230 434 -PLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYFPA 474 (489)
Q Consensus 434 -~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~~ 474 (489)
....+++-++-....+++|+|.++++|++++.++..+....
T Consensus 427 ~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~~~ 468 (501)
T 3hl2_A 427 NNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKE 468 (501)
T ss_dssp SCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 11135777777778999999999999999999886554443
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.71 E-value=5.8e-15 Score=149.25 Aligned_cols=301 Identities=17% Similarity=0.202 Sum_probs=186.3
Q ss_pred hhHHHHHHHHHHHhCCCCE---EEeCccHHHH-HHhHhhhcC---CCCEEEEcCCCchHHHHHHHhcCCeEEEecC---C
Q 046230 146 MVHNELEECVARFVGKPAA---IVFGMGYVTN-SAILPVLMR---KGSLIISDSLNHNSIVNGARGSGATIRVFQH---N 215 (489)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~---i~~~sG~~a~-~~~~~al~~---~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~---~ 215 (489)
.+..++...+.+.+|.++. ++++++|..+ .+++.+... +++.|++++..|.|+..++.+.|..++.++. +
T Consensus 98 ~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~ 177 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEG 177 (450)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecC
Confidence 4456777777787887643 5555555344 444444332 3788888899999999999999998887754 2
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccccccccCCCCc
Q 046230 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG 290 (489)
Q Consensus 216 -----d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g~~g~~G~~ 290 (489)
|+++|+++|+++. +..+++|++.+.+...|.+.|+++|.++|++||++|++|+||+ +.-+....
T Consensus 178 ~~~~id~~~le~aI~~~~---------~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G--~~~~~~~~ 246 (450)
T 3bc8_A 178 DELRTDLKAVEAKIQELG---------PEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYG--LQSSKCMH 246 (450)
T ss_dssp TEEECCHHHHHHHHHHHC---------GGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTT--TTCHHHHH
T ss_pred ccCCcCHHHHHHHHHhcC---------CCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCc--hhhhhhHh
Confidence 8999999998752 1356777777666656688999999999999999999999998 32111111
Q ss_pred cc-cccCCCCCCccEEEcccccccCCc-c-eEEEe-CHHHHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHccCCCch
Q 046230 291 VC-ELLEVDTADVDIMMGTFTKSFGSC-G-GYIAG-SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSR 366 (489)
Q Consensus 291 ~~-~~~~v~p~~~Di~~~t~sK~~g~~-G-G~i~~-~~~~~~~l~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~ 366 (489)
.. +.+.. ...|+++.|.+|++..+ | +++.. +++.++.+...-.. ..+.+|. .....++..+ +.+.
T Consensus 247 l~~~a~~~--~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g---~~s~Sps--L~l~~~l~~~----G~~g 315 (450)
T 3bc8_A 247 LIQQGARV--GRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPG---RASASPS--LDVLITLLSL----GCSG 315 (450)
T ss_dssp HHHHHHHH--SCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCS---CBCSHHH--HHHHHHHHHH----HHHH
T ss_pred HHHHHhcc--cCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhc---CCcccHH--HHHHHHHHHH----HHHH
Confidence 11 11111 23488888999999643 5 55543 66666665443211 1123342 2222332222 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCeEEEE-eCC-----CCcHHHHHHHHhhCC---ceEE-------
Q 046230 367 GAQKLARIRENSNFFRSELQKM----GFEVLGDNDSPVMPIM-LYN-----PAKIPAFSRECLRQN---VAVV------- 426 (489)
Q Consensus 367 ~~~~~~~~~~~~~~l~~~L~~~----g~~v~~~~~~~~~~~~-~~~-----~~~~~~~~~~l~~~G---i~v~------- 426 (489)
..+.+++..++.+++++.|+++ |..+.+....++-... +.. ..+...+.-.+...| .-+.
T Consensus 316 ~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~ 395 (450)
T 3bc8_A 316 YRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQT 395 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccc
Confidence 4455555678888999888765 6666554322221111 111 223445666665554 3333
Q ss_pred ---e--ecCC--CcCCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 046230 427 ---T--VAFP--ATPLLLARARICISASHTKEDLIKALEVISRVGDLVG 468 (489)
Q Consensus 427 ---~--~~~p--~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (489)
. ..|. ......+++-+..+...+++|+++++++|+++.++..
T Consensus 396 ~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~ 444 (450)
T 3bc8_A 396 VSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVR 444 (450)
T ss_dssp ETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 1111 1122346788888889999999999999999876653
No 237
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=50.49 E-value=35 Score=22.06 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=27.2
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 438 ARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
.++|+++. +-|+.+.+.+...|.+++.+++-.
T Consensus 2 ervrisit-artkkeaekfaailikvfaelgyn 33 (62)
T 2gjh_A 2 ERVRISIT-ARTKKEAEKFAAILIKVFAELGYN 33 (62)
T ss_dssp CEEEEEEE-CSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEEE-ecchhHHHHHHHHHHHHHHHhCcc
Confidence 46899986 678999999999999999998743
No 238
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=49.70 E-value=95 Score=28.29 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=51.8
Q ss_pred CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 163 AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 163 ~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.+-++++...|.-+++.+...+.-|++..+..+ +++++..++......|. ..
T Consensus 108 d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~-------------------t~~e~~~Av~~i~~~Gn-------~~- 160 (262)
T 1zco_A 108 DILQIGARNSQNFELLKEVGKVENPVLLKRGMGN-------------------TIQELLYSAEYIMAQGN-------EN- 160 (262)
T ss_dssp SEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTC-------------------CHHHHHHHHHHHHTTTC-------CC-
T ss_pred CEEEECcccccCHHHHHHHHhcCCcEEEecCCCC-------------------CHHHHHHHHHHHHHCCC-------Ce-
Confidence 3444555555555455555444444444333322 45666666654444432 23
Q ss_pred EEEEc-C--cC-CCCCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 243 MVIVE-G--IY-SMEGELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 243 ~vive-~--v~-s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
+++++ + .+ +..-...+|..+..+.+.++..+|.|--|+.|
T Consensus 161 i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g 204 (262)
T 1zco_A 161 VILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAG 204 (262)
T ss_dssp EEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTC
T ss_pred EEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCC
Confidence 44444 2 11 11112356889999999889999999999944
No 239
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=46.84 E-value=86 Score=30.43 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcC-cCCCCC---CCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG-IYSMEG---ELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~-v~s~~G---~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
++++++.+++.....|. .. +++++. +.+-.. ...+|..|..+.+.+++.+++|-.|+.|
T Consensus 261 t~~e~~~Ave~i~~~Gn-------~~-i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 261 TIEEFIGAAEYIMSQGN-------GK-IILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CHHHHHHHHHHHHTTTC-------CC-EEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CHHHHHHHHHHHHHcCC-------Ce-EEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 56777777665544442 23 455553 332111 2357999999999999999999998843
No 240
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=45.87 E-value=78 Score=30.29 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-Cc--C-CCCCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GI--Y-SMEGELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v--~-s~~G~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
++++++.+++.....|. .. ++++| ++ | +.+=...++..|..+.+.++..+++|--|+.|
T Consensus 225 tl~ei~~Ave~i~~~GN-------~~-viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 225 TIEEFLLSAEYIANSGN-------TK-IILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CHHHHHHHHHHHHHTTC-------CC-EEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CHHHHHHHHHHHHHCCC-------Ce-EEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 56677766665555542 23 33443 22 2 11122357889999999889999999999944
No 241
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=45.40 E-value=69 Score=29.52 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEc-CcCCCCC---CCCChHHHHHHHHHcCcEEEEEcccccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE-GIYSMEG---ELCKFPEIIAICKKYKAYIYLDEAHSIG 282 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive-~v~s~~G---~~~~l~~i~~l~~~~~~~li~DEa~s~g 282 (489)
++++++.+++.....|. .. +++++ ++.+-.+ ...++..|..+.+.+++.+++|--|+.|
T Consensus 157 t~~ei~~Ave~i~~~Gn-------~~-i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGN-------WQ-VVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CHHHHHHHHHHHHHTTC-------CC-EEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CHHHHHHHHHHHHHcCC-------Ce-EEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 66777777776555542 22 55566 5422212 2356888999988889999999999944
No 242
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=44.86 E-value=42 Score=29.45 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=30.1
Q ss_pred ccEEEEEcCc-CCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGI-YSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v-~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
..+.|++|-+ .+..|.+..++++.+++++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4577888873 56789999999999999999998773
No 243
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=43.84 E-value=33 Score=30.06 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=29.9
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
..+.|++|-+-+..|++..++++.+++++||+.+|
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 56788888664678999999999999999998776
No 244
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=42.84 E-value=34 Score=28.39 Aligned_cols=53 Identities=15% Similarity=0.236 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh----HHHH-HHHHHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF----PEII-AICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l----~~i~-~l~~~~~~-~li~DEa~s 280 (489)
+.+.|.+++++ +....++++-+.++.|+..+. ++.+ .+++++++ +.++||.++
T Consensus 43 ~~~~l~~li~~------------~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 43 GLSRLSELIKD------------YTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp CHHHHHHHHTT------------SEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHH------------cCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 56778887776 567778888778888877552 2333 45555676 567899988
No 245
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=38.09 E-value=64 Score=23.04 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=28.0
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 046230 437 LARARICISASHTKEDLIKALEVISRVGDLVGIK 470 (489)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (489)
..++|+++. +-|+.+.+.+...|.+++.+++-.
T Consensus 45 akrvrisit-artkkeaekfaailikvfaelgyn 77 (106)
T 1qys_A 45 AKRVRISIT-ARTKKEAEKFAAILIKVFAELGYN 77 (106)
T ss_dssp CSEEEEEEE-CSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEEEE-ecchhHHHHHHHHHHHHHHHhCCc
Confidence 367999996 678999999999999999998743
No 246
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=35.64 E-value=55 Score=29.14 Aligned_cols=35 Identities=17% Similarity=0.074 Sum_probs=29.6
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
..+.|++|-+ +..|.+..++++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 5678888866 5679999999999999999987763
No 247
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=35.18 E-value=1.7e+02 Score=23.40 Aligned_cols=98 Identities=9% Similarity=0.028 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCeEEEEeCCCCcHHHHHHHHhhCCceEEeecCCCcCCCC--CeEEEeecCCCC
Q 046230 372 ARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLL--ARARICISASHT 449 (489)
Q Consensus 372 ~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~--~~iRi~~~~~~t 449 (489)
.+...+++.+.+ |.+-|...... ..-=.++.+.+......++..+.+.|.-+..........+. -.+.++.....+
T Consensus 16 ~q~~~n~~Vl~~-L~e~Gddl~~~-r~IEH~~~F~de~~~e~~a~~~~~~Gy~v~~~~~~e~e~g~~~~~~~i~~~~~l~ 93 (132)
T 1nxi_A 16 IQKEETRDIIQA-LLEDGSDPDAL-YEIEHHLFAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALD 93 (132)
T ss_dssp HHHHHHHHHHHH-HHHHTCCTTSC-EEEEEEEEESCHHHHHHHHHHHHHHTCCCBCCCCBCCSSCSSBEEEEEEEEECSC
T ss_pred HHHHHHHHHHHH-HHhCCCCcCCC-eEEEEEEEeCCHHHHHHHHHHHHHCCCEEEecccccCCCCceeEEEEEEEeccCC
Confidence 334444444444 44445433111 11113344556667788999999888877631111111121 256777767788
Q ss_pred HHHHHHHHHHHHHHHHHhCCcc
Q 046230 450 KEDLIKALEVISRVGDLVGIKY 471 (489)
Q Consensus 450 ~edid~~l~~l~~~~~~~~~~~ 471 (489)
.++|......|.++.++++-.|
T Consensus 94 ~~~I~~~~~~L~~lA~~~~G~Y 115 (132)
T 1nxi_A 94 AKLIDEQVEKLVNLAEKFDIIY 115 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHhCcEe
Confidence 9999999999999999887655
No 248
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=34.60 E-value=1.7e+02 Score=23.04 Aligned_cols=62 Identities=18% Similarity=0.333 Sum_probs=37.4
Q ss_pred CeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 207 ~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
..+...+..|++++.+.|.+.+.+. |.=- ....+++=++... ...++.+|.++++++|+.+|
T Consensus 17 l~vl~l~~~d~~~l~~~L~~ki~~a-P~FF-~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 17 LSVVHLHEAEPEVIRQALEDKIAQA-PAFL-KHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHS-HHHH-TTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHhC-hHhh-CCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 4455566778888888777655442 0000 0122222234443 13579999999999999875
No 249
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=34.60 E-value=73 Score=28.17 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=29.1
Q ss_pred ccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
..+.|++|-+ +..|++..++++.+++++||+.+|.
T Consensus 167 ~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 4567888755 6689999999999999999997763
No 250
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.12 E-value=2.3e+02 Score=24.24 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=37.7
Q ss_pred HHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 198 IVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 198 ~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
...-..+.+.++..+..++.+++++.+++...+|- -+| +++.. .+++|+++|+.-++
T Consensus 109 ~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~---------~vv-VG~~~-----------~~~~A~~~Gl~~vl 165 (196)
T 2q5c_A 109 KHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENI---------KIV-VSGKT-----------VTDEAIKQGLYGET 165 (196)
T ss_dssp HHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTC---------CEE-EECHH-----------HHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCC---------eEE-ECCHH-----------HHHHHHHcCCcEEE
Confidence 34445667888888888888888888888766542 233 33322 36788888865443
No 251
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=33.08 E-value=75 Score=24.11 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCC----hHHHH-HHHHHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCK----FPEII-AICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~----l~~i~-~l~~~~~~-~li~DEa~s 280 (489)
+.+.|++++++ +....+|++-+.+|.|+..+ .++.. +|.++ ++ +.++||=.|
T Consensus 39 ~~~~l~~li~e------------~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRR------------EGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHH------------HTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCSCC
T ss_pred HHHHHHHHHHH------------cCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCCCC
Confidence 45677777776 35557778877888887755 22333 33333 65 566898765
No 252
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=28.28 E-value=61 Score=26.39 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCCh-HH----HHHHHHHcCc-EEEEEcccc
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKF-PE----IIAICKKYKA-YIYLDEAHS 280 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l-~~----i~~l~~~~~~-~li~DEa~s 280 (489)
+.+.|++++++. ....||++-+.+|.|+..+. +. ..+|.+++++ +.++||=+|
T Consensus 41 ~~~~l~~li~e~------------~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 41 DWNIIERLLKEW------------QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp CHHHHHHHHHHH------------CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred HHHHHHHHHHHc------------CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 688999999883 55567777777888887663 22 2233444565 677999988
No 253
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.24 E-value=3.1e+02 Score=24.15 Aligned_cols=86 Identities=13% Similarity=-0.017 Sum_probs=49.3
Q ss_pred CccHHHHHHhHhhhcCCCCEEEEcCCC-chHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEE
Q 046230 168 GMGYVTNSAILPVLMRKGSLIISDSLN-HNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIV 246 (489)
Q Consensus 168 ~sG~~a~~~~~~al~~~g~~Vl~~~~~-h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~viv 246 (489)
.||+.-..++..+-...+++.++.-.+ ......-..+.+.++..+...+.++++..+.+...+|- -+| +
T Consensus 90 vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~---------~vV-V 159 (225)
T 2pju_A 90 PSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGT---------EAV-V 159 (225)
T ss_dssp CCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTC---------CEE-E
T ss_pred CCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCC---------CEE-E
Confidence 444444333333333334444433333 23334445667888888888899999999988766542 233 3
Q ss_pred cCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 046230 247 EGIYSMEGELCKFPEIIAICKKYKAYIY 274 (489)
Q Consensus 247 e~v~s~~G~~~~l~~i~~l~~~~~~~li 274 (489)
++.. .+++|+++|+.-+
T Consensus 160 G~~~-----------~~~~A~~~Gl~~v 176 (225)
T 2pju_A 160 GAGL-----------ITDLAEEAGMTGI 176 (225)
T ss_dssp ESHH-----------HHHHHHHTTSEEE
T ss_pred CCHH-----------HHHHHHHcCCcEE
Confidence 3322 3678888876533
No 254
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=26.78 E-value=26 Score=34.99 Aligned_cols=29 Identities=21% Similarity=0.441 Sum_probs=25.1
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 252 MEGELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 252 ~~G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
.-|+...++++++-|+++|+-||+|-|..
T Consensus 72 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 72 RSGNEDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 34566679999999999999999999965
No 255
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.44 E-value=1.5e+02 Score=27.16 Aligned_cols=67 Identities=9% Similarity=0.032 Sum_probs=41.7
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEe--cCCCHHHHHHHHHHHHh
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVF--QHNTPSHLEEVLREQIA 229 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~--~~~d~~~Le~~l~~~~~ 229 (489)
+.+++|.|+..+ .++...+...|..|++..-+-..........|.+...+ +..|.+++++++++...
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 567777777777 88888888888766654433333333344445444444 44488888888776543
No 256
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.26 E-value=2e+02 Score=26.13 Aligned_cols=94 Identities=9% Similarity=0.006 Sum_probs=48.4
Q ss_pred EEeCccHHHH-HHhHhhhcCCC-CEEEEcCCCc---hHH---HHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCC
Q 046230 165 IVFGMGYVTN-SAILPVLMRKG-SLIISDSLNH---NSI---VNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTH 236 (489)
Q Consensus 165 i~~~sG~~a~-~~~~~al~~~g-~~Vl~~~~~h---~~~---~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~ 236 (489)
++++.|+... ..++..+...| +++++..... ..- .......+..++..+..|.+.++++++.
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---------- 76 (313)
T 1qyd_A 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQ---------- 76 (313)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTT----------
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhC----------
Confidence 4444433333 44555555444 4445444321 111 1112334667666677788888888753
Q ss_pred CCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcC-c
Q 046230 237 RPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK-A 271 (489)
Q Consensus 237 ~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~-~ 271 (489)
..++|..-+.......+.....+.+.|++.| +
T Consensus 77 ---~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v 109 (313)
T 1qyd_A 77 ---VDVVISALAGGVLSHHILEQLKLVEAIKEAGNI 109 (313)
T ss_dssp ---CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCC
T ss_pred ---CCEEEECCccccchhhHHHHHHHHHHHHhcCCC
Confidence 2233333232221112344678999999988 5
No 257
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.77 E-value=54 Score=28.41 Aligned_cols=43 Identities=14% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 046230 215 NTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 215 ~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
.|+++|+++++. ....+++. +|.+..++++++.++++|-.+++
T Consensus 17 r~~~~l~~al~s------------~~~~ifll------~g~i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILEL------------DLTYMVML------ETHVAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTS------------SCCEEEEC------SEETTTHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHcC------------CCCEEEEe------cCcHHHHHHHHHHHHHcCCeEEE
Confidence 478999998865 23334443 24567999999999999866655
No 258
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=23.23 E-value=4.5e+02 Score=24.95 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=18.0
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCC
Q 046230 212 FQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME 253 (489)
Q Consensus 212 ~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~ 253 (489)
....+.+.+.+.++....+ ....+||++.+..+.
T Consensus 132 ~~~~~~e~~l~~l~~l~~~--------~~~~lVVIDsl~~l~ 165 (366)
T 1xp8_A 132 SQPDNGEQALEIMELLVRS--------GAIDVVVVDSVAALT 165 (366)
T ss_dssp ECCSSHHHHHHHHHHHHTT--------TCCSEEEEECTTTCC
T ss_pred ecCCcHHHHHHHHHHHHhc--------CCCCEEEEeChHHhc
Confidence 3344556655555543322 234467777776654
No 259
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=23.19 E-value=2.8e+02 Score=25.41 Aligned_cols=91 Identities=11% Similarity=0.243 Sum_probs=53.4
Q ss_pred CEEEeCccHHHHHHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCCCCccE
Q 046230 163 AAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKI 242 (489)
Q Consensus 163 ~~i~~~sG~~a~~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~~g~~~~~~~~~~~ 242 (489)
+.+-+.++-..|.-+++.+.+.+..|++.++..+ +++++..++......|. ..
T Consensus 107 d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~-------------------t~~e~~~A~~~i~~~Gn-------~~- 159 (280)
T 2qkf_A 107 DVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFL-------------------SPSQMKNIVEKFHEAGN-------GK- 159 (280)
T ss_dssp SEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTS-------------------CGGGHHHHHHHHHHTTC-------CC-
T ss_pred CEEEECcccccCHHHHHHHHcCCCcEEEECCCCC-------------------CHHHHHHHHHHHHHcCC-------Ce-
Confidence 4555666655555566666666777776666543 23344444443333332 23
Q ss_pred EEEEc--CcCCCCCCCCChHHHHHHHHHc-CcEEEEEcccc
Q 046230 243 MVIVE--GIYSMEGELCKFPEIIAICKKY-KAYIYLDEAHS 280 (489)
Q Consensus 243 ~vive--~v~s~~G~~~~l~~i~~l~~~~-~~~li~DEa~s 280 (489)
+++++ ..|+.+-...++..|..+.+.+ +..+++|--|+
T Consensus 160 i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 200 (280)
T 2qkf_A 160 LILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHS 200 (280)
T ss_dssp EEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHH
T ss_pred EEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCC
Confidence 33333 2232211125788999998888 89999999998
No 260
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=23.18 E-value=1e+02 Score=27.42 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=28.5
Q ss_pred ccEEEEEcCcCCC-----------CCCCCChHHHHHHHHHcCcEEEE
Q 046230 240 KKIMVIVEGIYSM-----------EGELCKFPEIIAICKKYKAYIYL 275 (489)
Q Consensus 240 ~~~~vive~v~s~-----------~G~~~~l~~i~~l~~~~~~~li~ 275 (489)
..+.|++|-+ +. .|.+..++++.+++++||+.++.
T Consensus 167 ~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 167 RPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4567877755 44 68999999999999999987763
No 261
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.15 E-value=1.8e+02 Score=26.13 Aligned_cols=66 Identities=11% Similarity=0.085 Sum_probs=40.5
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEec--CCCHHHHHHHHHHHH
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQ--HNTPSHLEEVLREQI 228 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~--~~d~~~Le~~l~~~~ 228 (489)
+.+++|.|+..+ ..+...+...|..|+...-+-..........+..+..+. ..|.++++++++...
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHH
Confidence 567788888777 778888887777665543333333333333355555544 447888887776543
No 262
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=21.11 E-value=1.9e+02 Score=25.44 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=39.9
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCCEEEEcCCCchHHHHHHHhcCCeEEEecCC--CHHHHHHHHHHH
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--TPSHLEEVLREQ 227 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~--d~~~Le~~l~~~ 227 (489)
+.++++.|+..+ ..+...+...|..|+...-+-..........+..+..+..+ |.+++++++++.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 74 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEI 74 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 466777777776 77777887777766654444333333333335555555444 788888777654
No 263
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.90 E-value=43 Score=33.20 Aligned_cols=28 Identities=21% Similarity=0.446 Sum_probs=24.3
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 253 EGELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 253 ~G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
-|+...++++++-|+++|+-||+|-|.-
T Consensus 61 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 61 GGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 3555669999999999999999999965
No 264
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=20.88 E-value=51 Score=32.52 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=22.7
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccc
Q 046230 254 GELCKFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 254 G~~~~l~~i~~l~~~~~~~li~DEa~s 280 (489)
|+...++++++.|+++|+-||+|-|..
T Consensus 67 Gt~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 67 GSEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 556678999999999999999999855
No 265
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=20.74 E-value=5.3e+02 Score=24.20 Aligned_cols=53 Identities=11% Similarity=0.103 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCccEEEEEcCcCCCCCCC------CC----hHHHHHHHHHcCcEEEE
Q 046230 216 TPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL------CK----FPEIIAICKKYKAYIYL 275 (489)
Q Consensus 216 d~~~Le~~l~~~~~~g~~~~~~~~~~~~vive~v~s~~G~~------~~----l~~i~~l~~~~~~~li~ 275 (489)
+++++...++....+. ....+||++.++.+.+.- .. ...|..+|+++++.+|+
T Consensus 139 si~~i~~~ir~l~~~~-------gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~ 201 (338)
T 4a1f_A 139 RIEQIRLQLRKLKSQH-------KELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIA 201 (338)
T ss_dssp CHHHHHHHHHHHHHHC-------TTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEE
T ss_pred cHHHHHHHHHHHHHhc-------CCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 5677777776543320 145677778777665421 11 45778888888876664
No 266
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.62 E-value=1.5e+02 Score=26.42 Aligned_cols=66 Identities=18% Similarity=0.118 Sum_probs=42.0
Q ss_pred CEEEeCccHHHH-HHhHhhhcCCCC-EEEEcCCCchHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHh
Q 046230 163 AAIVFGMGYVTN-SAILPVLMRKGS-LIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIA 229 (489)
Q Consensus 163 ~~i~~~sG~~a~-~~~~~al~~~g~-~Vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~Le~~l~~~~~ 229 (489)
+.+++|.|+..+ ..+...+...|. +++.+.... .....+...+......+..|.++++++++....
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEH-ASVTELRQAGAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-HHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHH
Confidence 567777777776 777777776665 445554432 333344444666666677788888888876543
No 267
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=20.20 E-value=52 Score=31.08 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=18.9
Q ss_pred ChHHHHHHHHHcCcEEEEEcccc
Q 046230 258 KFPEIIAICKKYKAYIYLDEAHS 280 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa~s 280 (489)
.+++++++|+++|+++|+| .|.
T Consensus 106 ~ld~~v~~a~~~Gi~VilD-~H~ 127 (327)
T 3pzt_A 106 KVKEAVEAAKELGIYVIID-WHI 127 (327)
T ss_dssp HHHHHHHHHHHHTCEEEEE-EEC
T ss_pred HHHHHHHHHHHCCCEEEEE-ecc
Confidence 4799999999999999988 454
No 268
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.14 E-value=55 Score=30.12 Aligned_cols=21 Identities=14% Similarity=0.317 Sum_probs=18.5
Q ss_pred ChHHHHHHHHHcCcEEEEEcc
Q 046230 258 KFPEIIAICKKYKAYIYLDEA 278 (489)
Q Consensus 258 ~l~~i~~l~~~~~~~li~DEa 278 (489)
.++.++++|+++|+++|+|--
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 478999999999999998864
Done!